Multiple sequence alignment - TraesCS7D01G324900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G324900 chr7D 100.000 5132 0 0 1 5132 414522625 414517494 0.000000e+00 9478.0
1 TraesCS7D01G324900 chr7D 100.000 2877 0 0 5397 8273 414517229 414514353 0.000000e+00 5313.0
2 TraesCS7D01G324900 chr7D 79.605 608 94 19 1 586 477662308 477661709 7.730000e-110 409.0
3 TraesCS7D01G324900 chr7D 95.833 96 3 1 3163 3257 168579920 168580015 4.000000e-33 154.0
4 TraesCS7D01G324900 chr7B 94.322 2730 101 23 5433 8112 428964071 428961346 0.000000e+00 4133.0
5 TraesCS7D01G324900 chr7B 92.484 1530 64 26 589 2090 428968432 428966926 0.000000e+00 2141.0
6 TraesCS7D01G324900 chr7B 94.118 1173 51 9 3960 5127 428965231 428964072 0.000000e+00 1768.0
7 TraesCS7D01G324900 chr7B 97.080 685 19 1 2339 3022 428966627 428965943 0.000000e+00 1153.0
8 TraesCS7D01G324900 chr7B 94.990 519 21 1 3256 3774 428965738 428965225 0.000000e+00 809.0
9 TraesCS7D01G324900 chr7B 82.485 491 60 12 3 472 334303268 334302783 2.780000e-109 407.0
10 TraesCS7D01G324900 chr7B 95.604 182 8 0 3777 3958 587917166 587916985 8.120000e-75 292.0
11 TraesCS7D01G324900 chr7B 90.179 224 15 4 2086 2304 428966847 428966626 1.360000e-72 285.0
12 TraesCS7D01G324900 chr7B 98.230 113 2 0 3027 3139 428965838 428965726 1.820000e-46 198.0
13 TraesCS7D01G324900 chr7A 94.492 1761 64 10 6541 8273 477019394 477017639 0.000000e+00 2684.0
14 TraesCS7D01G324900 chr7A 91.089 1975 102 30 363 2304 477027451 477025518 0.000000e+00 2604.0
15 TraesCS7D01G324900 chr7A 94.843 1144 47 8 5417 6552 477022187 477021048 0.000000e+00 1775.0
16 TraesCS7D01G324900 chr7A 95.267 824 18 4 2338 3140 477025520 477024697 0.000000e+00 1286.0
17 TraesCS7D01G324900 chr7A 94.372 231 12 1 4877 5107 477024429 477024200 3.670000e-93 353.0
18 TraesCS7D01G324900 chr7A 94.144 222 9 3 3256 3477 477024710 477024493 1.330000e-87 335.0
19 TraesCS7D01G324900 chr7A 95.652 184 8 0 3774 3957 504220162 504219979 6.280000e-76 296.0
20 TraesCS7D01G324900 chr7A 94.737 57 1 2 2290 2345 360611187 360611242 4.110000e-13 87.9
21 TraesCS7D01G324900 chr5D 80.270 593 81 18 1 569 27852458 27853038 1.660000e-111 414.0
22 TraesCS7D01G324900 chr5D 94.054 185 11 0 3777 3961 155845086 155844902 1.760000e-71 281.0
23 TraesCS7D01G324900 chr5D 92.746 193 13 1 3777 3968 174012216 174012024 2.270000e-70 278.0
24 TraesCS7D01G324900 chr5D 95.050 101 4 1 3158 3257 558970431 558970531 3.090000e-34 158.0
25 TraesCS7D01G324900 chr5D 93.333 105 4 3 3156 3257 205794638 205794742 1.440000e-32 152.0
26 TraesCS7D01G324900 chr5D 90.351 114 8 3 3147 3257 521371694 521371581 6.690000e-31 147.0
27 TraesCS7D01G324900 chr4D 83.614 415 56 5 1 406 87944061 87943650 6.060000e-101 379.0
28 TraesCS7D01G324900 chr4D 92.523 107 6 2 3159 3263 323929672 323929566 1.440000e-32 152.0
29 TraesCS7D01G324900 chr4D 92.188 64 2 3 2279 2341 11573271 11573332 4.110000e-13 87.9
30 TraesCS7D01G324900 chr4D 92.063 63 2 3 2283 2344 334963102 334963162 1.480000e-12 86.1
31 TraesCS7D01G324900 chr2A 79.221 539 88 13 66 586 673025975 673026507 3.670000e-93 353.0
32 TraesCS7D01G324900 chr2A 92.973 185 13 0 3777 3961 601333171 601333355 3.810000e-68 270.0
33 TraesCS7D01G324900 chr2A 79.609 358 58 12 2410 2759 774851320 774851670 8.300000e-60 243.0
34 TraesCS7D01G324900 chr2A 98.113 53 1 0 2293 2345 38968409 38968461 8.840000e-15 93.5
35 TraesCS7D01G324900 chr2D 78.400 500 84 10 2 480 619467938 619468434 3.750000e-78 303.0
36 TraesCS7D01G324900 chr2D 79.609 358 58 11 2410 2759 650064651 650064301 8.300000e-60 243.0
37 TraesCS7D01G324900 chr2D 81.421 183 18 8 320 499 600608332 600608501 1.450000e-27 135.0
38 TraesCS7D01G324900 chr2D 95.588 68 3 0 1 68 327487480 327487547 8.780000e-20 110.0
39 TraesCS7D01G324900 chr2B 79.810 421 70 11 66 479 626632194 626632606 8.120000e-75 292.0
40 TraesCS7D01G324900 chr2B 88.235 102 12 0 5574 5675 786036459 786036358 1.130000e-23 122.0
41 TraesCS7D01G324900 chr1A 94.595 185 10 0 3775 3959 59991812 59991996 3.780000e-73 287.0
42 TraesCS7D01G324900 chrUn 94.118 187 11 0 3774 3960 67784927 67785113 1.360000e-72 285.0
43 TraesCS7D01G324900 chrUn 79.609 358 58 11 2410 2759 477384963 477384613 8.300000e-60 243.0
44 TraesCS7D01G324900 chrUn 82.609 161 18 5 320 480 168830709 168830559 5.210000e-27 134.0
45 TraesCS7D01G324900 chrUn 95.455 66 3 0 1 66 12379175 12379110 1.140000e-18 106.0
46 TraesCS7D01G324900 chrUn 92.537 67 5 0 414 480 168865029 168864963 6.830000e-16 97.1
47 TraesCS7D01G324900 chrUn 98.039 51 0 1 2299 2348 253929079 253929129 4.110000e-13 87.9
48 TraesCS7D01G324900 chr3D 94.536 183 10 0 3777 3959 543100869 543101051 4.890000e-72 283.0
49 TraesCS7D01G324900 chr3D 92.424 66 4 1 415 480 531432663 531432599 8.840000e-15 93.5
50 TraesCS7D01G324900 chr3D 96.226 53 2 0 2292 2344 25970302 25970354 4.110000e-13 87.9
51 TraesCS7D01G324900 chr3D 96.226 53 2 0 2292 2344 436676891 436676943 4.110000e-13 87.9
52 TraesCS7D01G324900 chr4B 82.895 304 48 3 79 381 586225742 586226042 3.810000e-68 270.0
53 TraesCS7D01G324900 chr4B 91.667 108 7 2 3151 3257 621424686 621424792 1.860000e-31 148.0
54 TraesCS7D01G324900 chr3B 83.007 306 44 4 1 298 808677382 808677687 3.810000e-68 270.0
55 TraesCS7D01G324900 chr6D 92.432 185 14 0 3777 3961 385585497 385585681 1.770000e-66 265.0
56 TraesCS7D01G324900 chr6D 93.333 105 4 3 3156 3257 200398706 200398810 1.440000e-32 152.0
57 TraesCS7D01G324900 chr6D 94.643 56 2 1 2289 2344 283795865 283795811 1.480000e-12 86.1
58 TraesCS7D01G324900 chr1D 82.629 213 34 2 201 413 262693180 262693389 1.420000e-42 185.0
59 TraesCS7D01G324900 chr1D 95.455 66 3 0 1 66 199112023 199111958 1.140000e-18 106.0
60 TraesCS7D01G324900 chr6A 91.667 108 7 2 3156 3261 499211689 499211796 1.860000e-31 148.0
61 TraesCS7D01G324900 chr6A 95.000 60 3 0 419 478 592496395 592496336 2.460000e-15 95.3
62 TraesCS7D01G324900 chr3A 90.991 111 7 3 3156 3264 647618285 647618176 6.690000e-31 147.0
63 TraesCS7D01G324900 chr5B 79.429 175 31 5 414 586 58399825 58399654 1.460000e-22 119.0
64 TraesCS7D01G324900 chr5B 77.841 176 32 4 414 586 226633640 226633469 1.470000e-17 102.0
65 TraesCS7D01G324900 chr6B 92.958 71 4 1 1 71 176849952 176849883 1.470000e-17 102.0
66 TraesCS7D01G324900 chr6B 92.537 67 5 0 414 480 672630941 672630875 6.830000e-16 97.1
67 TraesCS7D01G324900 chr6B 96.296 54 2 0 2292 2345 524465522 524465575 1.140000e-13 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G324900 chr7D 414514353 414522625 8272 True 7395.500000 9478 100.000000 1 8273 2 chr7D.!!$R2 8272
1 TraesCS7D01G324900 chr7D 477661709 477662308 599 True 409.000000 409 79.605000 1 586 1 chr7D.!!$R1 585
2 TraesCS7D01G324900 chr7B 428961346 428968432 7086 True 1498.142857 4133 94.486143 589 8112 7 chr7B.!!$R3 7523
3 TraesCS7D01G324900 chr7A 477017639 477027451 9812 True 1506.166667 2684 94.034500 363 8273 6 chr7A.!!$R2 7910
4 TraesCS7D01G324900 chr5D 27852458 27853038 580 False 414.000000 414 80.270000 1 569 1 chr5D.!!$F1 568
5 TraesCS7D01G324900 chr2A 673025975 673026507 532 False 353.000000 353 79.221000 66 586 1 chr2A.!!$F3 520

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
163 173 0.475906 AGCACCCTCTTTGCAACTCT 59.524 50.000 0.00 0.00 42.83 3.24 F
1146 1178 0.619832 TCTGAGCATCCTTCCTGCCT 60.620 55.000 0.00 0.00 40.56 4.75 F
1497 1538 0.038343 ATCCACACGCATTTTGGTGC 60.038 50.000 0.00 0.00 41.65 5.01 F
1499 1540 0.940519 CCACACGCATTTTGGTGCTG 60.941 55.000 0.00 0.00 42.88 4.41 F
1668 1713 0.995024 ACCTGCTAGCTTCAACCCAT 59.005 50.000 17.23 0.00 0.00 4.00 F
3257 3508 1.732117 TTTTGGGACGGAGGGAGTAA 58.268 50.000 0.00 0.00 0.00 2.24 F
3824 4078 0.461961 CTTAAGTGCGCCTAGGCTCT 59.538 55.000 30.55 21.51 38.30 4.09 F
4569 4825 0.108207 ATGGCCTATGAGTGCTCAGC 59.892 55.000 3.32 5.83 43.61 4.26 F
4612 4869 0.326595 TTGATACTGAGGCCGCCAAA 59.673 50.000 13.15 0.00 0.00 3.28 F
4971 5229 0.586802 TGATGACCGCTATCTCGTCG 59.413 55.000 0.00 0.00 0.00 5.12 F
5088 5346 0.973632 TGGTCAGCGTACAAGGATGT 59.026 50.000 0.00 0.00 43.74 3.06 F
5089 5347 1.346395 TGGTCAGCGTACAAGGATGTT 59.654 47.619 0.00 0.00 41.05 2.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1442 1483 0.031043 TCGACGAGAAAACCAGCGAA 59.969 50.000 0.00 0.00 0.00 4.70 R
2407 2557 1.073923 GTGACTCCCCTGTGAAATGGT 59.926 52.381 0.00 0.00 0.00 3.55 R
3451 3705 0.395311 TAGGCTCCTGTCCCTGTACG 60.395 60.000 0.00 0.00 32.65 3.67 R
3519 3773 0.655733 CGTGTTTCAAGGTGCTTCGT 59.344 50.000 0.00 0.00 0.00 3.85 R
3610 3864 0.389166 CGAGCTGGACCTGACAAGAC 60.389 60.000 1.91 0.00 0.00 3.01 R
4229 4485 0.171455 ACTTGGCTGAGATCGTCGAC 59.829 55.000 5.18 5.18 0.00 4.20 R
5415 5764 0.319986 GCCTCCCGCTAACTGCTATC 60.320 60.000 0.00 0.00 40.11 2.08 R
6383 8349 1.172175 CCTTTCTGGAGCAAGCTTCC 58.828 55.000 0.00 0.00 38.35 3.46 R
6452 8418 1.887956 GCCTCATTTGCTGTTCCCTCA 60.888 52.381 0.00 0.00 0.00 3.86 R
6723 10356 0.250901 ATGCAGTGTCGCCCTTCTTT 60.251 50.000 0.00 0.00 0.00 2.52 R
7059 10734 2.440501 CAACGCCTCGCATAAATTGTC 58.559 47.619 0.00 0.00 0.00 3.18 R
7373 11052 1.610522 GAACTCAAGCACTTGTGGCAT 59.389 47.619 14.82 3.40 41.16 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 0.834687 AAGTAGAACACGGGAGGCCA 60.835 55.000 5.01 0.00 0.00 5.36
45 46 4.699522 GGAGGCCACCGTCGCTTT 62.700 66.667 5.01 0.00 0.00 3.51
129 139 4.380945 GCCCCATGGAAGCACCCA 62.381 66.667 15.22 0.00 41.05 4.51
158 168 1.174712 GCTCAAGCACCCTCTTTGCA 61.175 55.000 0.00 0.00 42.83 4.08
163 173 0.475906 AGCACCCTCTTTGCAACTCT 59.524 50.000 0.00 0.00 42.83 3.24
164 174 1.699634 AGCACCCTCTTTGCAACTCTA 59.300 47.619 0.00 0.00 42.83 2.43
172 182 3.925379 TCTTTGCAACTCTAATGAGCGA 58.075 40.909 0.00 0.00 43.85 4.93
179 189 1.202582 ACTCTAATGAGCGACGCAACT 59.797 47.619 23.70 0.00 43.85 3.16
182 192 1.358725 TAATGAGCGACGCAACTGGC 61.359 55.000 23.70 4.38 39.90 4.85
214 225 1.807814 ACGGGGAAGAATATGCCTCT 58.192 50.000 0.00 0.00 0.00 3.69
252 263 3.605749 TTAGCAGGCTGCCGGACAC 62.606 63.158 34.33 6.90 46.52 3.67
306 317 6.191657 TCGTAGACTAATGTAGGGTATCCA 57.808 41.667 0.00 0.00 34.83 3.41
308 319 7.921304 TCGTAGACTAATGTAGGGTATCCATA 58.079 38.462 0.00 0.00 34.83 2.74
342 353 2.126228 CCGCATGACCGTACGTGT 60.126 61.111 15.21 11.67 0.00 4.49
360 371 8.216453 CGTACGTGTACATAGTTTTAGCTTTTT 58.784 33.333 7.22 0.00 35.87 1.94
408 419 4.213596 ACCGTTTTCATCCGTTTTGTAC 57.786 40.909 0.00 0.00 0.00 2.90
486 510 5.424121 AGTTTGAAATATATGCAGACGGC 57.576 39.130 0.00 0.00 45.13 5.68
496 520 1.153628 GCAGACGGCGTTGGATAGT 60.154 57.895 16.19 0.00 0.00 2.12
509 533 3.627395 TGGATAGTGTTCTTCCGCATT 57.373 42.857 0.00 0.00 31.90 3.56
554 579 2.189257 CGTGGATGGATGCGGGAA 59.811 61.111 0.00 0.00 0.00 3.97
555 580 1.227943 CGTGGATGGATGCGGGAAT 60.228 57.895 0.00 0.00 0.00 3.01
563 588 5.476599 TGGATGGATGCGGGAATAAATTTAG 59.523 40.000 3.94 0.00 0.00 1.85
570 595 3.955551 GCGGGAATAAATTTAGGGGTTCA 59.044 43.478 3.94 0.00 0.00 3.18
588 613 1.180029 CAAGTTGAAGATGCCCTGGG 58.820 55.000 8.86 8.86 0.00 4.45
600 625 4.665009 AGATGCCCTGGGTAAAATATCTGA 59.335 41.667 15.56 0.00 0.00 3.27
603 628 5.200483 TGCCCTGGGTAAAATATCTGAAAG 58.800 41.667 15.56 0.00 0.00 2.62
715 740 1.302913 TGGATCCCGCGAGCAAAAA 60.303 52.632 8.23 0.00 0.00 1.94
716 741 1.136774 GGATCCCGCGAGCAAAAAC 59.863 57.895 8.23 0.00 0.00 2.43
717 742 1.582610 GGATCCCGCGAGCAAAAACA 61.583 55.000 8.23 0.00 0.00 2.83
777 802 3.542742 GTCTCGTTAGGCGTGCGC 61.543 66.667 8.17 8.17 42.13 6.09
1146 1178 0.619832 TCTGAGCATCCTTCCTGCCT 60.620 55.000 0.00 0.00 40.56 4.75
1164 1201 2.719739 CCTGTGTGCTGATTGAGGAAT 58.280 47.619 0.00 0.00 0.00 3.01
1409 1450 1.285962 CAGTTCATGGTGGGAATCCCT 59.714 52.381 20.55 0.00 45.70 4.20
1442 1483 6.605594 TCCACAAGACTCCACTTTTAATTGTT 59.394 34.615 0.00 0.00 0.00 2.83
1460 1501 0.856641 TTTCGCTGGTTTTCTCGTCG 59.143 50.000 0.00 0.00 0.00 5.12
1467 1508 1.890489 TGGTTTTCTCGTCGATCCTGA 59.110 47.619 0.00 0.00 0.00 3.86
1497 1538 0.038343 ATCCACACGCATTTTGGTGC 60.038 50.000 0.00 0.00 41.65 5.01
1499 1540 0.940519 CCACACGCATTTTGGTGCTG 60.941 55.000 0.00 0.00 42.88 4.41
1538 1579 4.219033 CACGTGTTGCTTTTCTTGGATAC 58.781 43.478 7.58 0.00 0.00 2.24
1568 1609 5.363939 ACAGCTTGTAGATGAAATAGAGGC 58.636 41.667 0.00 0.00 34.75 4.70
1650 1695 4.092091 CACCGAATTTCTCTTACTCTGCAC 59.908 45.833 0.00 0.00 0.00 4.57
1668 1713 0.995024 ACCTGCTAGCTTCAACCCAT 59.005 50.000 17.23 0.00 0.00 4.00
1696 1741 6.532657 GGGAGTTCAGAATAATGCAAATTGTG 59.467 38.462 13.19 13.19 0.00 3.33
1741 1786 5.294060 TCTTTCTTCAAATTTTGCAACTGGC 59.706 36.000 0.00 0.00 45.13 4.85
1747 1792 2.008242 ATTTTGCAACTGGCCCAGTA 57.992 45.000 18.61 0.00 44.62 2.74
1761 1806 2.159627 GCCCAGTACAACATTCAGAACG 59.840 50.000 0.00 0.00 0.00 3.95
1762 1807 3.399330 CCCAGTACAACATTCAGAACGT 58.601 45.455 0.00 0.00 0.00 3.99
1767 1814 2.404215 ACAACATTCAGAACGTCGGAG 58.596 47.619 0.00 0.00 0.00 4.63
1949 1997 5.240891 TGTTCCATTGTGAGTTGATCTCTC 58.759 41.667 10.19 10.19 43.13 3.20
1958 2006 4.325741 GTGAGTTGATCTCTCGATGTTGTG 59.674 45.833 11.65 0.00 43.13 3.33
1959 2007 3.854666 AGTTGATCTCTCGATGTTGTGG 58.145 45.455 0.00 0.00 0.00 4.17
2000 2057 9.783081 AGAAAGTTTGCCAATTTCATCTATTTT 57.217 25.926 6.36 0.00 35.79 1.82
2056 2113 2.680339 GTTTCTGTAGGAGGCTGCAATC 59.320 50.000 9.23 0.00 0.00 2.67
2100 2240 4.329801 TGCACGATGAGTATTTAGCAGTTG 59.670 41.667 0.00 0.00 0.00 3.16
2106 2247 5.550232 TGAGTATTTAGCAGTTGCACATG 57.450 39.130 6.90 0.00 45.16 3.21
2184 2325 6.384224 TGATTGCAGCAAATAAAAGAGACTG 58.616 36.000 12.97 0.00 0.00 3.51
2201 2342 9.520204 AAAGAGACTGTGTTGATTGTTATTTTG 57.480 29.630 0.00 0.00 0.00 2.44
2205 2346 7.701924 AGACTGTGTTGATTGTTATTTTGTGTG 59.298 33.333 0.00 0.00 0.00 3.82
2209 2350 8.438513 TGTGTTGATTGTTATTTTGTGTGTTTG 58.561 29.630 0.00 0.00 0.00 2.93
2248 2389 9.410556 CATGCTAACAATATACCCATAAAAAGC 57.589 33.333 0.00 0.00 0.00 3.51
2250 2391 8.972127 TGCTAACAATATACCCATAAAAAGCAA 58.028 29.630 0.00 0.00 31.40 3.91
2251 2392 9.810545 GCTAACAATATACCCATAAAAAGCAAA 57.189 29.630 0.00 0.00 0.00 3.68
2310 2460 4.832590 CTGTTATACAGTACTCCCTCCG 57.167 50.000 0.00 0.00 41.19 4.63
2311 2461 4.205587 CTGTTATACAGTACTCCCTCCGT 58.794 47.826 0.00 0.00 41.19 4.69
2312 2462 5.371526 CTGTTATACAGTACTCCCTCCGTA 58.628 45.833 0.00 0.00 41.19 4.02
2313 2463 5.754782 TGTTATACAGTACTCCCTCCGTAA 58.245 41.667 0.00 0.00 0.00 3.18
2314 2464 6.186957 TGTTATACAGTACTCCCTCCGTAAA 58.813 40.000 0.00 0.00 0.00 2.01
2315 2465 6.319658 TGTTATACAGTACTCCCTCCGTAAAG 59.680 42.308 0.00 0.00 0.00 1.85
2316 2466 3.446442 ACAGTACTCCCTCCGTAAAGA 57.554 47.619 0.00 0.00 0.00 2.52
2317 2467 3.771216 ACAGTACTCCCTCCGTAAAGAA 58.229 45.455 0.00 0.00 0.00 2.52
2318 2468 4.154942 ACAGTACTCCCTCCGTAAAGAAA 58.845 43.478 0.00 0.00 0.00 2.52
2319 2469 4.776308 ACAGTACTCCCTCCGTAAAGAAAT 59.224 41.667 0.00 0.00 0.00 2.17
2320 2470 5.954150 ACAGTACTCCCTCCGTAAAGAAATA 59.046 40.000 0.00 0.00 0.00 1.40
2321 2471 6.610425 ACAGTACTCCCTCCGTAAAGAAATAT 59.390 38.462 0.00 0.00 0.00 1.28
2322 2472 7.781693 ACAGTACTCCCTCCGTAAAGAAATATA 59.218 37.037 0.00 0.00 0.00 0.86
2323 2473 8.636213 CAGTACTCCCTCCGTAAAGAAATATAA 58.364 37.037 0.00 0.00 0.00 0.98
2324 2474 8.858094 AGTACTCCCTCCGTAAAGAAATATAAG 58.142 37.037 0.00 0.00 0.00 1.73
2325 2475 7.909485 ACTCCCTCCGTAAAGAAATATAAGA 57.091 36.000 0.00 0.00 0.00 2.10
2326 2476 7.953752 ACTCCCTCCGTAAAGAAATATAAGAG 58.046 38.462 0.00 0.00 0.00 2.85
2327 2477 6.756221 TCCCTCCGTAAAGAAATATAAGAGC 58.244 40.000 0.00 0.00 0.00 4.09
2328 2478 5.634020 CCCTCCGTAAAGAAATATAAGAGCG 59.366 44.000 0.00 0.00 0.00 5.03
2329 2479 6.214399 CCTCCGTAAAGAAATATAAGAGCGT 58.786 40.000 0.00 0.00 0.00 5.07
2330 2480 6.700520 CCTCCGTAAAGAAATATAAGAGCGTT 59.299 38.462 0.00 0.00 0.00 4.84
2331 2481 7.224167 CCTCCGTAAAGAAATATAAGAGCGTTT 59.776 37.037 0.00 0.00 0.00 3.60
2332 2482 9.241317 CTCCGTAAAGAAATATAAGAGCGTTTA 57.759 33.333 0.00 0.00 0.00 2.01
2333 2483 9.241317 TCCGTAAAGAAATATAAGAGCGTTTAG 57.759 33.333 0.00 0.00 0.00 1.85
2334 2484 9.241317 CCGTAAAGAAATATAAGAGCGTTTAGA 57.759 33.333 0.00 0.00 0.00 2.10
2351 2501 6.074249 GCGTTTAGATCACTACTTATGCCTTC 60.074 42.308 0.00 0.00 0.00 3.46
2881 3032 7.471041 TGGAGATATCACTAGCCACTAGTTAT 58.529 38.462 5.32 5.75 43.82 1.89
2935 3086 7.893124 AAATGCTGTCAGGATTATCAGAAAT 57.107 32.000 18.69 0.00 35.10 2.17
2942 3093 6.127647 TGTCAGGATTATCAGAAATTTGGTGC 60.128 38.462 0.00 0.00 0.00 5.01
3022 3173 5.979993 TGAAATTAGCTTACACCGGTATGA 58.020 37.500 6.87 0.00 0.00 2.15
3023 3174 6.408035 TGAAATTAGCTTACACCGGTATGAA 58.592 36.000 6.87 0.08 0.00 2.57
3074 3325 9.713713 GTTACATAGAAGGGAGGAGATAAATTC 57.286 37.037 0.00 0.00 0.00 2.17
3118 3369 2.046292 TGGTCTCGGGATTGATGCATA 58.954 47.619 0.00 0.00 0.00 3.14
3177 3428 2.740506 AAAAACTCCCTCCGTCCAAA 57.259 45.000 0.00 0.00 0.00 3.28
3178 3429 2.740506 AAAACTCCCTCCGTCCAAAA 57.259 45.000 0.00 0.00 0.00 2.44
3179 3430 2.971901 AAACTCCCTCCGTCCAAAAT 57.028 45.000 0.00 0.00 0.00 1.82
3180 3431 4.376225 AAAACTCCCTCCGTCCAAAATA 57.624 40.909 0.00 0.00 0.00 1.40
3181 3432 4.376225 AAACTCCCTCCGTCCAAAATAA 57.624 40.909 0.00 0.00 0.00 1.40
3182 3433 3.629142 ACTCCCTCCGTCCAAAATAAG 57.371 47.619 0.00 0.00 0.00 1.73
3183 3434 2.910977 ACTCCCTCCGTCCAAAATAAGT 59.089 45.455 0.00 0.00 0.00 2.24
3184 3435 3.270877 CTCCCTCCGTCCAAAATAAGTG 58.729 50.000 0.00 0.00 0.00 3.16
3185 3436 2.640826 TCCCTCCGTCCAAAATAAGTGT 59.359 45.455 0.00 0.00 0.00 3.55
3186 3437 3.007635 CCCTCCGTCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
3187 3438 3.307480 CCCTCCGTCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
3188 3439 3.933332 CCTCCGTCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
3189 3440 4.562757 CCTCCGTCCAAAATAAGTGTCTCA 60.563 45.833 0.00 0.00 0.00 3.27
3190 3441 4.963373 TCCGTCCAAAATAAGTGTCTCAA 58.037 39.130 0.00 0.00 0.00 3.02
3191 3442 4.753107 TCCGTCCAAAATAAGTGTCTCAAC 59.247 41.667 0.00 0.00 0.00 3.18
3192 3443 4.755123 CCGTCCAAAATAAGTGTCTCAACT 59.245 41.667 0.00 0.00 0.00 3.16
3193 3444 5.238650 CCGTCCAAAATAAGTGTCTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
3194 3445 6.238648 CCGTCCAAAATAAGTGTCTCAACTTT 60.239 38.462 0.00 0.00 40.77 2.66
3195 3446 6.632834 CGTCCAAAATAAGTGTCTCAACTTTG 59.367 38.462 0.00 0.00 40.77 2.77
3196 3447 7.480810 GTCCAAAATAAGTGTCTCAACTTTGT 58.519 34.615 0.00 0.00 40.77 2.83
3197 3448 8.617809 GTCCAAAATAAGTGTCTCAACTTTGTA 58.382 33.333 0.00 0.00 40.77 2.41
3198 3449 8.617809 TCCAAAATAAGTGTCTCAACTTTGTAC 58.382 33.333 0.00 0.00 40.77 2.90
3199 3450 8.621286 CCAAAATAAGTGTCTCAACTTTGTACT 58.379 33.333 0.00 0.00 40.77 2.73
3205 3456 8.788325 AAGTGTCTCAACTTTGTACTAACTTT 57.212 30.769 0.00 0.00 37.05 2.66
3206 3457 9.880157 AAGTGTCTCAACTTTGTACTAACTTTA 57.120 29.630 0.00 0.00 37.05 1.85
3207 3458 9.530633 AGTGTCTCAACTTTGTACTAACTTTAG 57.469 33.333 0.00 0.00 36.82 1.85
3208 3459 9.310716 GTGTCTCAACTTTGTACTAACTTTAGT 57.689 33.333 6.85 6.85 45.39 2.24
3226 3477 8.459911 ACTTTAGTACAAAATTGCACTAAGGT 57.540 30.769 19.96 19.96 45.07 3.50
3227 3478 8.909923 ACTTTAGTACAAAATTGCACTAAGGTT 58.090 29.630 19.96 10.39 46.41 3.50
3228 3479 9.180678 CTTTAGTACAAAATTGCACTAAGGTTG 57.819 33.333 15.07 7.26 43.82 3.77
3229 3480 6.952773 AGTACAAAATTGCACTAAGGTTGA 57.047 33.333 0.00 0.00 33.18 3.18
3230 3481 6.970484 AGTACAAAATTGCACTAAGGTTGAG 58.030 36.000 0.00 0.00 33.18 3.02
3231 3482 6.770785 AGTACAAAATTGCACTAAGGTTGAGA 59.229 34.615 0.00 0.00 33.18 3.27
3232 3483 5.831997 ACAAAATTGCACTAAGGTTGAGAC 58.168 37.500 0.00 0.00 0.00 3.36
3233 3484 5.359576 ACAAAATTGCACTAAGGTTGAGACA 59.640 36.000 0.00 0.00 0.00 3.41
3234 3485 6.040842 ACAAAATTGCACTAAGGTTGAGACAT 59.959 34.615 0.00 0.00 0.00 3.06
3235 3486 6.655078 AAATTGCACTAAGGTTGAGACATT 57.345 33.333 0.00 0.00 33.77 2.71
3236 3487 6.655078 AATTGCACTAAGGTTGAGACATTT 57.345 33.333 0.00 0.00 31.38 2.32
3237 3488 7.759489 AATTGCACTAAGGTTGAGACATTTA 57.241 32.000 0.00 0.00 31.38 1.40
3238 3489 7.944729 ATTGCACTAAGGTTGAGACATTTAT 57.055 32.000 0.00 0.00 31.38 1.40
3239 3490 7.759489 TTGCACTAAGGTTGAGACATTTATT 57.241 32.000 0.00 0.00 31.38 1.40
3240 3491 7.759489 TGCACTAAGGTTGAGACATTTATTT 57.241 32.000 0.00 0.00 31.38 1.40
3241 3492 8.177119 TGCACTAAGGTTGAGACATTTATTTT 57.823 30.769 0.00 0.00 31.38 1.82
3242 3493 8.081633 TGCACTAAGGTTGAGACATTTATTTTG 58.918 33.333 0.00 0.00 31.38 2.44
3243 3494 7.542130 GCACTAAGGTTGAGACATTTATTTTGG 59.458 37.037 0.00 0.00 31.38 3.28
3244 3495 8.028938 CACTAAGGTTGAGACATTTATTTTGGG 58.971 37.037 0.00 0.00 31.38 4.12
3245 3496 7.947890 ACTAAGGTTGAGACATTTATTTTGGGA 59.052 33.333 0.00 0.00 31.38 4.37
3246 3497 6.590234 AGGTTGAGACATTTATTTTGGGAC 57.410 37.500 0.00 0.00 0.00 4.46
3247 3498 5.183140 AGGTTGAGACATTTATTTTGGGACG 59.817 40.000 0.00 0.00 0.00 4.79
3248 3499 5.399013 GTTGAGACATTTATTTTGGGACGG 58.601 41.667 0.00 0.00 0.00 4.79
3249 3500 4.912586 TGAGACATTTATTTTGGGACGGA 58.087 39.130 0.00 0.00 0.00 4.69
3250 3501 4.941263 TGAGACATTTATTTTGGGACGGAG 59.059 41.667 0.00 0.00 0.00 4.63
3251 3502 4.270008 AGACATTTATTTTGGGACGGAGG 58.730 43.478 0.00 0.00 0.00 4.30
3252 3503 3.361786 ACATTTATTTTGGGACGGAGGG 58.638 45.455 0.00 0.00 0.00 4.30
3253 3504 3.010808 ACATTTATTTTGGGACGGAGGGA 59.989 43.478 0.00 0.00 0.00 4.20
3254 3505 3.359695 TTTATTTTGGGACGGAGGGAG 57.640 47.619 0.00 0.00 0.00 4.30
3255 3506 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
3256 3507 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
3257 3508 1.732117 TTTTGGGACGGAGGGAGTAA 58.268 50.000 0.00 0.00 0.00 2.24
3258 3509 1.732117 TTTGGGACGGAGGGAGTAAA 58.268 50.000 0.00 0.00 0.00 2.01
3259 3510 1.961133 TTGGGACGGAGGGAGTAAAT 58.039 50.000 0.00 0.00 0.00 1.40
3260 3511 2.852714 TGGGACGGAGGGAGTAAATA 57.147 50.000 0.00 0.00 0.00 1.40
3261 3512 2.391678 TGGGACGGAGGGAGTAAATAC 58.608 52.381 0.00 0.00 0.00 1.89
3262 3513 2.292389 TGGGACGGAGGGAGTAAATACA 60.292 50.000 0.00 0.00 0.00 2.29
3263 3514 2.767960 GGGACGGAGGGAGTAAATACAA 59.232 50.000 0.00 0.00 0.00 2.41
3264 3515 3.390311 GGGACGGAGGGAGTAAATACAAT 59.610 47.826 0.00 0.00 0.00 2.71
3265 3516 4.590222 GGGACGGAGGGAGTAAATACAATA 59.410 45.833 0.00 0.00 0.00 1.90
3266 3517 5.510349 GGGACGGAGGGAGTAAATACAATAC 60.510 48.000 0.00 0.00 0.00 1.89
3342 3593 6.619801 TTTTGTGTTAAGAAGAAGAGCCTC 57.380 37.500 0.00 0.00 0.00 4.70
3387 3641 3.247648 CGGAGAAAACAGAAAGAAGCGAA 59.752 43.478 0.00 0.00 0.00 4.70
3388 3642 4.609336 CGGAGAAAACAGAAAGAAGCGAAG 60.609 45.833 0.00 0.00 0.00 3.79
3389 3643 4.511826 GGAGAAAACAGAAAGAAGCGAAGA 59.488 41.667 0.00 0.00 0.00 2.87
3519 3773 1.900351 CAGTCTCGGGGCAATCTGA 59.100 57.895 0.00 0.00 0.00 3.27
3570 3824 2.864968 CACGTTCTAGAGCTACCACAC 58.135 52.381 4.99 0.00 0.00 3.82
3617 3871 1.128015 GCGCTCGTTTCGTCTTGTC 59.872 57.895 0.00 0.00 0.00 3.18
3618 3872 1.545614 GCGCTCGTTTCGTCTTGTCA 61.546 55.000 0.00 0.00 0.00 3.58
3627 3881 0.827925 TCGTCTTGTCAGGTCCAGCT 60.828 55.000 0.00 0.00 0.00 4.24
3663 3917 4.703897 TCTCTAACCAGGTGTTGAAGTTG 58.296 43.478 0.00 0.00 37.83 3.16
3692 3946 0.609957 TGAGGTGCAATGGCCTGAAG 60.610 55.000 3.32 0.00 40.13 3.02
3763 4017 2.488891 CCCGAGAGAGATGAGAGATGGT 60.489 54.545 0.00 0.00 0.00 3.55
3765 4019 3.253188 CCGAGAGAGATGAGAGATGGTTC 59.747 52.174 0.00 0.00 0.00 3.62
3778 4032 3.113260 GATGGTTCCATCTTCCCGTAG 57.887 52.381 20.64 0.00 39.58 3.51
3779 4033 1.946984 TGGTTCCATCTTCCCGTAGT 58.053 50.000 0.00 0.00 0.00 2.73
3780 4034 2.262637 TGGTTCCATCTTCCCGTAGTT 58.737 47.619 0.00 0.00 0.00 2.24
3781 4035 3.443052 TGGTTCCATCTTCCCGTAGTTA 58.557 45.455 0.00 0.00 0.00 2.24
3782 4036 3.839490 TGGTTCCATCTTCCCGTAGTTAA 59.161 43.478 0.00 0.00 0.00 2.01
3783 4037 4.286549 TGGTTCCATCTTCCCGTAGTTAAA 59.713 41.667 0.00 0.00 0.00 1.52
3784 4038 5.221884 TGGTTCCATCTTCCCGTAGTTAAAA 60.222 40.000 0.00 0.00 0.00 1.52
3785 4039 5.706833 GGTTCCATCTTCCCGTAGTTAAAAA 59.293 40.000 0.00 0.00 0.00 1.94
3821 4075 3.410958 GCTTAAGTGCGCCTAGGC 58.589 61.111 24.75 24.75 37.85 3.93
3822 4076 1.153349 GCTTAAGTGCGCCTAGGCT 60.153 57.895 30.55 14.71 39.32 4.58
3823 4077 1.154814 GCTTAAGTGCGCCTAGGCTC 61.155 60.000 30.55 24.16 39.32 4.70
3824 4078 0.461961 CTTAAGTGCGCCTAGGCTCT 59.538 55.000 30.55 21.51 38.30 4.09
3825 4079 1.681793 CTTAAGTGCGCCTAGGCTCTA 59.318 52.381 30.55 14.20 35.86 2.43
3826 4080 1.319541 TAAGTGCGCCTAGGCTCTAG 58.680 55.000 30.55 16.51 35.86 2.43
3827 4081 1.395826 AAGTGCGCCTAGGCTCTAGG 61.396 60.000 30.55 16.12 35.86 3.02
3867 4121 2.644078 GCATAACTGCGCTTAATCTGC 58.356 47.619 9.73 7.31 38.92 4.26
3877 4131 2.653584 CGCTTAATCTGCGCATAATTGC 59.346 45.455 21.82 17.41 46.72 3.56
3903 4157 2.267188 GCATGCGCTTTGATCAGAAA 57.733 45.000 9.73 0.00 34.30 2.52
3904 4158 2.598589 GCATGCGCTTTGATCAGAAAA 58.401 42.857 9.73 0.00 34.30 2.29
3905 4159 2.597305 GCATGCGCTTTGATCAGAAAAG 59.403 45.455 9.73 0.00 37.63 2.27
3913 4167 3.648339 TTGATCAGAAAAGCACAAGGC 57.352 42.857 0.00 0.00 45.30 4.35
3922 4176 3.910490 GCACAAGGCGGTGGCAAA 61.910 61.111 12.98 0.00 42.47 3.68
3923 4177 2.811101 CACAAGGCGGTGGCAAAA 59.189 55.556 4.67 0.00 42.47 2.44
3924 4178 1.591327 CACAAGGCGGTGGCAAAAC 60.591 57.895 4.67 0.00 42.47 2.43
3925 4179 2.354539 CAAGGCGGTGGCAAAACG 60.355 61.111 0.00 0.00 42.47 3.60
3930 4184 2.103143 CGGTGGCAAAACGCACAA 59.897 55.556 0.00 0.00 45.17 3.33
3931 4185 1.299773 CGGTGGCAAAACGCACAAT 60.300 52.632 0.00 0.00 45.17 2.71
3932 4186 0.873743 CGGTGGCAAAACGCACAATT 60.874 50.000 0.00 0.00 45.17 2.32
3933 4187 1.600663 CGGTGGCAAAACGCACAATTA 60.601 47.619 0.00 0.00 45.17 1.40
3934 4188 2.474816 GGTGGCAAAACGCACAATTAA 58.525 42.857 0.00 0.00 45.17 1.40
3935 4189 2.866762 GGTGGCAAAACGCACAATTAAA 59.133 40.909 0.00 0.00 45.17 1.52
3936 4190 3.059935 GGTGGCAAAACGCACAATTAAAG 60.060 43.478 0.00 0.00 45.17 1.85
3937 4191 2.541762 TGGCAAAACGCACAATTAAAGC 59.458 40.909 0.00 0.00 45.17 3.51
3938 4192 2.096466 GGCAAAACGCACAATTAAAGCC 60.096 45.455 0.00 0.00 45.17 4.35
3939 4193 2.799978 GCAAAACGCACAATTAAAGCCT 59.200 40.909 0.00 0.00 41.79 4.58
3940 4194 3.984633 GCAAAACGCACAATTAAAGCCTA 59.015 39.130 0.00 0.00 41.79 3.93
3941 4195 4.089923 GCAAAACGCACAATTAAAGCCTAG 59.910 41.667 0.00 0.00 41.79 3.02
3942 4196 3.487563 AACGCACAATTAAAGCCTAGC 57.512 42.857 0.00 0.00 0.00 3.42
3943 4197 2.091152 CGCACAATTAAAGCCTAGCG 57.909 50.000 0.00 0.00 37.91 4.26
3944 4198 1.827578 GCACAATTAAAGCCTAGCGC 58.172 50.000 0.00 0.00 37.98 5.92
3970 4224 7.687941 TTTTTGAACTATGATCTTCCTGGTC 57.312 36.000 0.00 0.00 0.00 4.02
3971 4225 6.373005 TTTGAACTATGATCTTCCTGGTCA 57.627 37.500 0.00 0.00 0.00 4.02
3972 4226 5.344743 TGAACTATGATCTTCCTGGTCAC 57.655 43.478 0.00 0.00 0.00 3.67
3973 4227 4.777366 TGAACTATGATCTTCCTGGTCACA 59.223 41.667 0.00 0.00 0.00 3.58
4039 4293 1.194781 TCTGAAGTCCAGCACCCCTC 61.195 60.000 0.00 0.00 42.62 4.30
4049 4303 2.584608 CACCCCTCCTTAGTGGCG 59.415 66.667 0.00 0.00 35.26 5.69
4073 4327 2.035704 CCTGGCACAATGTTTGCACTTA 59.964 45.455 0.00 0.00 42.12 2.24
4093 4347 3.618780 GAGGTGCTCAGGTGCCCAG 62.619 68.421 0.00 0.00 0.00 4.45
4134 4388 3.868077 CAGAGAGGTGATTCGACCAAATC 59.132 47.826 0.00 0.00 38.63 2.17
4154 4408 2.594962 GCGGACAACTCGGTGTGTG 61.595 63.158 0.00 0.00 0.00 3.82
4180 4434 1.644509 TCACTGTGTACTGCCCAGAT 58.355 50.000 7.79 0.00 0.00 2.90
4191 4445 1.880340 GCCCAGATGTCGAGAAGCG 60.880 63.158 0.00 0.00 42.69 4.68
4229 4485 1.379044 GAGGGGCAGAACCATGGTG 60.379 63.158 20.60 7.38 42.05 4.17
4237 4493 0.895530 AGAACCATGGTGTCGACGAT 59.104 50.000 20.60 0.00 0.00 3.73
4240 4496 0.456221 ACCATGGTGTCGACGATCTC 59.544 55.000 18.99 0.00 0.00 2.75
4253 4509 0.820226 CGATCTCAGCCAAGTGGAGA 59.180 55.000 0.18 0.00 41.50 3.71
4258 4514 3.679389 TCTCAGCCAAGTGGAGAAATTC 58.321 45.455 0.18 0.00 34.91 2.17
4347 4603 3.646715 CCCTTCGCCCCTTGACCA 61.647 66.667 0.00 0.00 0.00 4.02
4357 4613 0.537371 CCCTTGACCACACAAGTCCC 60.537 60.000 0.00 0.00 43.72 4.46
4381 4637 1.152881 CTGCCAAGACCATAGGGGC 60.153 63.158 0.00 0.00 45.66 5.80
4399 4655 2.502295 GGCCAGCTCCTTGATAGATTG 58.498 52.381 0.00 0.00 0.00 2.67
4400 4656 1.878734 GCCAGCTCCTTGATAGATTGC 59.121 52.381 0.00 0.00 0.00 3.56
4401 4657 2.502295 CCAGCTCCTTGATAGATTGCC 58.498 52.381 0.00 0.00 0.00 4.52
4402 4658 2.502295 CAGCTCCTTGATAGATTGCCC 58.498 52.381 0.00 0.00 0.00 5.36
4403 4659 1.423161 AGCTCCTTGATAGATTGCCCC 59.577 52.381 0.00 0.00 0.00 5.80
4404 4660 1.423161 GCTCCTTGATAGATTGCCCCT 59.577 52.381 0.00 0.00 0.00 4.79
4405 4661 2.551938 GCTCCTTGATAGATTGCCCCTC 60.552 54.545 0.00 0.00 0.00 4.30
4415 4671 0.982852 ATTGCCCCTCGATCCAGTGA 60.983 55.000 0.00 0.00 0.00 3.41
4484 4740 2.173382 GCGTGCGCTAAACCACAG 59.827 61.111 9.73 0.00 38.26 3.66
4508 4764 2.567615 GTGGTGGATGACCTTGAGTAGT 59.432 50.000 0.00 0.00 46.32 2.73
4565 4821 1.140452 CAGACATGGCCTATGAGTGCT 59.860 52.381 18.41 9.18 39.21 4.40
4569 4825 0.108207 ATGGCCTATGAGTGCTCAGC 59.892 55.000 3.32 5.83 43.61 4.26
4570 4826 1.266867 TGGCCTATGAGTGCTCAGCA 61.267 55.000 3.32 0.00 43.61 4.41
4606 4863 2.027192 TGGTGTCTTTGATACTGAGGCC 60.027 50.000 0.00 0.00 0.00 5.19
4612 4869 0.326595 TTGATACTGAGGCCGCCAAA 59.673 50.000 13.15 0.00 0.00 3.28
4624 4881 3.110178 GCCAAACTCGACCGGACG 61.110 66.667 20.40 20.40 0.00 4.79
4657 4914 3.593551 AAGCGACCGTGCAATTGCG 62.594 57.895 24.58 13.48 45.83 4.85
4664 4921 2.160221 CGTGCAATTGCGGCCATTC 61.160 57.895 24.58 8.37 45.83 2.67
4709 4966 3.557595 AGAAGTTTCACTGCTTCTTGTCG 59.442 43.478 0.00 0.00 46.35 4.35
4710 4967 2.213499 AGTTTCACTGCTTCTTGTCGG 58.787 47.619 0.00 0.00 0.00 4.79
4875 5132 3.199671 TCCAGAAGAGGGTAGTAGTCCT 58.800 50.000 0.00 0.00 35.82 3.85
4971 5229 0.586802 TGATGACCGCTATCTCGTCG 59.413 55.000 0.00 0.00 0.00 5.12
4978 5236 1.278238 CGCTATCTCGTCGGCTTTTT 58.722 50.000 0.00 0.00 0.00 1.94
5088 5346 0.973632 TGGTCAGCGTACAAGGATGT 59.026 50.000 0.00 0.00 43.74 3.06
5089 5347 1.346395 TGGTCAGCGTACAAGGATGTT 59.654 47.619 0.00 0.00 41.05 2.71
5480 7441 8.141835 AGTTGCAATAAATGGAGTTTTTGTTC 57.858 30.769 0.59 0.00 0.00 3.18
5542 7503 7.577303 AGGATCCATTTTAGTCATTGAGCTTA 58.423 34.615 15.82 0.00 0.00 3.09
5592 7553 5.385198 TCAGTTTTACCTGCAGGAAGAATT 58.615 37.500 39.19 21.03 38.94 2.17
5732 7693 4.064388 TGTTGCTCTGATCATTTTCGTCA 58.936 39.130 0.00 0.00 0.00 4.35
5768 7729 9.112725 CATGACCATCATCTTTGACATAGTTTA 57.887 33.333 0.00 0.00 34.28 2.01
5798 7759 2.821969 AGCATGTTGAAGGGTGCTTTAG 59.178 45.455 0.00 0.00 44.92 1.85
5803 7764 4.469657 TGTTGAAGGGTGCTTTAGTGATT 58.530 39.130 0.00 0.00 0.00 2.57
5807 7768 4.701651 TGAAGGGTGCTTTAGTGATTGATG 59.298 41.667 0.00 0.00 0.00 3.07
5820 7781 9.559732 TTTAGTGATTGATGTATGTGGGATAAG 57.440 33.333 0.00 0.00 0.00 1.73
5825 7786 8.219868 TGATTGATGTATGTGGGATAAGTGAAT 58.780 33.333 0.00 0.00 0.00 2.57
5853 7814 9.940166 AACCAGTATTTTACTTTGAACTTTACG 57.060 29.630 0.00 0.00 36.76 3.18
5865 7826 7.769044 ACTTTGAACTTTACGGCATCTATACAT 59.231 33.333 0.00 0.00 0.00 2.29
5952 7915 8.846211 TGGGTAAAACTTAAGAAGAACAATCAG 58.154 33.333 10.09 0.00 0.00 2.90
5989 7952 5.057819 TGTAACGAAACTGATTTACTGCCA 58.942 37.500 0.00 0.00 0.00 4.92
6008 7971 3.749954 GCCAATATGTCCAGGCTCTTGAT 60.750 47.826 0.00 0.00 43.70 2.57
6263 8228 7.119846 CCCTGTTCCTTGATTTGTCTACTTAAG 59.880 40.741 0.00 0.00 0.00 1.85
6290 8256 6.913873 TTTGAACTCAAGGTTGTGTACTAC 57.086 37.500 0.00 0.00 38.41 2.73
6296 8262 7.719871 ACTCAAGGTTGTGTACTACTGATAT 57.280 36.000 0.00 0.00 33.60 1.63
6383 8349 4.633126 TCAATTCATCTTTCTCCTCTTGCG 59.367 41.667 0.00 0.00 0.00 4.85
6449 8415 6.574350 TCTAGAAACAGCTGGCTATAAAGAC 58.426 40.000 19.93 0.00 0.00 3.01
6452 8418 4.408182 AACAGCTGGCTATAAAGACGAT 57.592 40.909 19.93 0.00 30.84 3.73
6530 8496 9.398538 ACTTGATGTGTACTTAAAGGTAAAACA 57.601 29.630 0.00 0.00 0.00 2.83
6717 10350 6.956299 AATCAAATGCAAGCTACAATTGAC 57.044 33.333 17.69 0.97 39.15 3.18
6723 10356 5.512753 TGCAAGCTACAATTGACTCAAAA 57.487 34.783 13.59 0.00 0.00 2.44
6835 10498 7.442666 GGTTTCTCTTATCATTGGGTCATACTC 59.557 40.741 0.00 0.00 0.00 2.59
6851 10514 6.464322 GGTCATACTCAATCCATGACACCATA 60.464 42.308 14.00 0.00 46.72 2.74
6941 10616 6.606796 TGCTTGGCCATATATCTTTCTTTTGA 59.393 34.615 6.09 0.00 0.00 2.69
7059 10734 1.538075 GTTGGTACCATGGTTTCACCG 59.462 52.381 25.38 0.00 42.58 4.94
7083 10758 1.728068 TTTATGCGAGGCGTTGCTTA 58.272 45.000 18.89 13.97 33.65 3.09
7434 11114 7.864686 TGAAAATCGTAGCATCATTTGGATAG 58.135 34.615 0.00 0.00 33.95 2.08
7441 11121 6.923508 CGTAGCATCATTTGGATAGTGAAGTA 59.076 38.462 0.00 0.00 33.95 2.24
7444 11124 7.512130 AGCATCATTTGGATAGTGAAGTATCA 58.488 34.615 7.32 0.00 33.95 2.15
7639 11319 3.960102 AGAATAGACTGGAGAGAAGGCAG 59.040 47.826 0.00 0.00 0.00 4.85
7655 11335 1.689575 GGCAGGACAGAGGAGATACCA 60.690 57.143 0.00 0.00 42.04 3.25
7656 11336 2.111384 GCAGGACAGAGGAGATACCAA 58.889 52.381 0.00 0.00 42.04 3.67
7659 11339 2.100989 GGACAGAGGAGATACCAACGT 58.899 52.381 0.00 0.00 42.04 3.99
7711 11401 0.980231 CAAGGGGAGAGGAGGTGAGG 60.980 65.000 0.00 0.00 0.00 3.86
7712 11402 1.156322 AAGGGGAGAGGAGGTGAGGA 61.156 60.000 0.00 0.00 0.00 3.71
7714 11404 0.762461 GGGGAGAGGAGGTGAGGATG 60.762 65.000 0.00 0.00 0.00 3.51
7727 11417 1.482182 TGAGGATGTTCATCCAGGTCG 59.518 52.381 26.92 0.00 43.14 4.79
7751 11441 4.103153 CCCTGCCACATAAAAGAGGAGATA 59.897 45.833 0.00 0.00 0.00 1.98
7752 11442 5.059833 CCTGCCACATAAAAGAGGAGATAC 58.940 45.833 0.00 0.00 0.00 2.24
7767 11460 7.750655 AGAGGAGATACAGAAAAGAAAAGGTT 58.249 34.615 0.00 0.00 0.00 3.50
7884 11580 2.154854 TGCTCTTGTCTTGGTTCTCG 57.845 50.000 0.00 0.00 0.00 4.04
8120 11816 2.290641 TGTTGCGATCAGTTGGGGTATT 60.291 45.455 0.00 0.00 0.00 1.89
8122 11818 2.639065 TGCGATCAGTTGGGGTATTTC 58.361 47.619 0.00 0.00 0.00 2.17
8124 11820 3.452990 TGCGATCAGTTGGGGTATTTCTA 59.547 43.478 0.00 0.00 0.00 2.10
8137 11834 8.950007 TGGGGTATTTCTATTTTTCTCTTGTT 57.050 30.769 0.00 0.00 0.00 2.83
8148 11845 9.231297 CTATTTTTCTCTTGTTCTGGTAATGGA 57.769 33.333 0.00 0.00 0.00 3.41
8149 11846 6.877611 TTTTCTCTTGTTCTGGTAATGGAC 57.122 37.500 0.00 0.00 0.00 4.02
8150 11847 5.560722 TTCTCTTGTTCTGGTAATGGACA 57.439 39.130 0.00 0.00 0.00 4.02
8151 11848 5.560722 TCTCTTGTTCTGGTAATGGACAA 57.439 39.130 0.00 0.00 0.00 3.18
8198 11896 9.871238 CTATGTGTTGTGTTCCTAAATAGTAGT 57.129 33.333 0.00 0.00 0.00 2.73
8225 11923 4.771903 TCTTTATAAATACCAGCGCCACA 58.228 39.130 2.29 0.00 0.00 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 2.826725 CTCCCGTGTTCTACTTCTCCTT 59.173 50.000 0.00 0.00 0.00 3.36
35 36 3.530910 CTGGGACCAAAGCGACGGT 62.531 63.158 0.00 0.00 38.56 4.83
38 39 0.955919 CTTCCTGGGACCAAAGCGAC 60.956 60.000 0.00 0.00 0.00 5.19
45 46 3.256960 GTGGCCTTCCTGGGACCA 61.257 66.667 3.32 0.00 36.00 4.02
114 124 1.456331 GGATGGGTGCTTCCATGGG 60.456 63.158 13.02 0.00 46.67 4.00
142 152 1.000938 GAGTTGCAAAGAGGGTGCTTG 60.001 52.381 0.00 0.00 42.69 4.01
158 168 1.993370 GTTGCGTCGCTCATTAGAGTT 59.007 47.619 19.50 0.00 44.00 3.01
163 173 1.358725 GCCAGTTGCGTCGCTCATTA 61.359 55.000 19.50 0.00 0.00 1.90
164 174 2.680913 GCCAGTTGCGTCGCTCATT 61.681 57.895 19.50 0.00 0.00 2.57
172 182 1.847798 TTCCCTATGGCCAGTTGCGT 61.848 55.000 13.05 0.00 42.61 5.24
179 189 1.348064 CCGTATCTTCCCTATGGCCA 58.652 55.000 8.56 8.56 0.00 5.36
182 192 2.320681 TCCCCGTATCTTCCCTATGG 57.679 55.000 0.00 0.00 0.00 2.74
252 263 1.751437 GGATCCCTTTGTCTTTCCCG 58.249 55.000 0.00 0.00 0.00 5.14
256 267 0.676782 CGGCGGATCCCTTTGTCTTT 60.677 55.000 6.06 0.00 0.00 2.52
283 294 6.191657 TGGATACCCTACATTAGTCTACGA 57.808 41.667 0.00 0.00 0.00 3.43
330 341 4.764679 AAACTATGTACACGTACGGTCA 57.235 40.909 21.06 12.53 38.85 4.02
408 419 2.561569 AGGCCGGATTTCATACTTTCG 58.438 47.619 5.05 0.00 0.00 3.46
413 424 3.769536 CAAACAAGGCCGGATTTCATAC 58.230 45.455 5.05 0.00 0.00 2.39
482 506 0.606604 AGAACACTATCCAACGCCGT 59.393 50.000 0.00 0.00 0.00 5.68
484 508 2.007608 GGAAGAACACTATCCAACGCC 58.992 52.381 0.00 0.00 33.30 5.68
486 510 1.659098 GCGGAAGAACACTATCCAACG 59.341 52.381 0.00 0.00 32.58 4.10
496 520 2.083774 GGTCATGAATGCGGAAGAACA 58.916 47.619 0.00 0.00 0.00 3.18
509 533 1.437573 GATCAGTCCGCGGTCATGA 59.562 57.895 27.15 25.39 0.00 3.07
554 579 8.950007 TCTTCAACTTGAACCCCTAAATTTAT 57.050 30.769 0.00 0.00 32.21 1.40
555 580 8.802267 CATCTTCAACTTGAACCCCTAAATTTA 58.198 33.333 0.00 0.00 32.21 1.40
563 588 1.546029 GGCATCTTCAACTTGAACCCC 59.454 52.381 0.00 0.00 32.21 4.95
570 595 0.779997 ACCCAGGGCATCTTCAACTT 59.220 50.000 4.91 0.00 0.00 2.66
588 613 7.277098 TGACAGCGGTACTTTCAGATATTTTAC 59.723 37.037 0.00 0.00 30.02 2.01
600 625 2.490991 GGACTTTGACAGCGGTACTTT 58.509 47.619 0.00 0.00 0.00 2.66
603 628 1.623973 GCGGACTTTGACAGCGGTAC 61.624 60.000 0.00 0.00 0.00 3.34
672 697 1.990614 GAGGACCCAGGACCAGGAC 60.991 68.421 4.06 0.00 32.53 3.85
1128 1160 0.464013 CAGGCAGGAAGGATGCTCAG 60.464 60.000 0.00 0.00 43.35 3.35
1146 1178 4.583907 TGAAAATTCCTCAATCAGCACACA 59.416 37.500 0.00 0.00 0.00 3.72
1164 1201 1.298953 CCCTCCTCCCCATCTGAAAA 58.701 55.000 0.00 0.00 0.00 2.29
1442 1483 0.031043 TCGACGAGAAAACCAGCGAA 59.969 50.000 0.00 0.00 0.00 4.70
1460 1501 6.481644 GTGTGGATGACTCTATTTTCAGGATC 59.518 42.308 0.00 0.00 0.00 3.36
1467 1508 3.937814 TGCGTGTGGATGACTCTATTTT 58.062 40.909 0.00 0.00 0.00 1.82
1497 1538 2.844146 GACGTGCCGTTCGAACAG 59.156 61.111 26.71 17.60 41.37 3.16
1499 1540 4.405173 GCGACGTGCCGTTCGAAC 62.405 66.667 18.47 18.47 41.37 3.95
1516 1557 2.842208 TCCAAGAAAAGCAACACGTG 57.158 45.000 15.48 15.48 0.00 4.49
1517 1558 3.880490 TGTATCCAAGAAAAGCAACACGT 59.120 39.130 0.00 0.00 0.00 4.49
1518 1559 4.219033 GTGTATCCAAGAAAAGCAACACG 58.781 43.478 0.00 0.00 0.00 4.49
1519 1560 5.181690 TGTGTATCCAAGAAAAGCAACAC 57.818 39.130 0.00 0.00 37.18 3.32
1520 1561 5.843673 TTGTGTATCCAAGAAAAGCAACA 57.156 34.783 0.00 0.00 0.00 3.33
1538 1579 9.926751 CTATTTCATCTACAAGCTGTATTTGTG 57.073 33.333 0.00 0.00 39.03 3.33
1585 1630 6.376018 GGTGCATGTAAACTATTTTGGGAGTA 59.624 38.462 0.00 0.00 0.00 2.59
1586 1631 5.185056 GGTGCATGTAAACTATTTTGGGAGT 59.815 40.000 0.00 0.00 0.00 3.85
1627 1672 4.092091 GTGCAGAGTAAGAGAAATTCGGTG 59.908 45.833 0.00 0.00 0.00 4.94
1650 1695 3.209410 CTTATGGGTTGAAGCTAGCAGG 58.791 50.000 18.83 0.00 0.00 4.85
1668 1713 8.469200 CAATTTGCATTATTCTGAACTCCCTTA 58.531 33.333 0.00 0.00 0.00 2.69
1741 1786 3.399330 ACGTTCTGAATGTTGTACTGGG 58.601 45.455 9.40 0.00 0.00 4.45
1747 1792 2.223971 ACTCCGACGTTCTGAATGTTGT 60.224 45.455 22.33 13.86 31.12 3.32
1761 1806 1.477685 TTCCCAAGGGTCACTCCGAC 61.478 60.000 4.80 0.00 44.57 4.79
1762 1807 0.765135 TTTCCCAAGGGTCACTCCGA 60.765 55.000 4.80 0.00 37.00 4.55
1767 1814 1.893137 GAACCATTTCCCAAGGGTCAC 59.107 52.381 4.80 0.00 46.67 3.67
1949 1997 3.261580 TGAAGACATAGCCACAACATCG 58.738 45.455 0.00 0.00 0.00 3.84
1958 2006 6.749923 AACTTTCTTCATGAAGACATAGCC 57.250 37.500 32.80 0.00 46.13 3.93
1959 2007 6.525976 GCAAACTTTCTTCATGAAGACATAGC 59.474 38.462 32.80 25.82 46.13 2.97
1980 2033 7.256494 AGGGAAAATAGATGAAATTGGCAAA 57.744 32.000 3.01 0.00 0.00 3.68
2000 2057 3.227614 GCTTTGGTGGAACTAAAAGGGA 58.772 45.455 0.00 0.00 46.78 4.20
2027 2084 4.081198 AGCCTCCTACAGAAACATTCTCAG 60.081 45.833 0.00 0.00 38.11 3.35
2081 2138 4.329801 TGTGCAACTGCTAAATACTCATCG 59.670 41.667 2.95 0.00 42.66 3.84
2084 2141 4.395854 CCATGTGCAACTGCTAAATACTCA 59.604 41.667 2.95 0.00 42.66 3.41
2106 2247 3.412386 AGTACATTTTCAGCACAGGACC 58.588 45.455 0.00 0.00 0.00 4.46
2184 2325 8.439286 ACAAACACACAAAATAACAATCAACAC 58.561 29.630 0.00 0.00 0.00 3.32
2200 2341 6.507958 TGAGAAAGATTTCACAAACACACA 57.492 33.333 7.97 0.00 39.61 3.72
2201 2342 6.074676 GCATGAGAAAGATTTCACAAACACAC 60.075 38.462 9.04 0.00 40.26 3.82
2205 2346 7.862372 TGTTAGCATGAGAAAGATTTCACAAAC 59.138 33.333 9.04 9.19 40.26 2.93
2235 2376 7.731054 ACAGTGAAATTTGCTTTTTATGGGTA 58.269 30.769 0.00 0.00 0.00 3.69
2251 2392 9.685276 TGAATGTGATAGGATTTACAGTGAAAT 57.315 29.630 0.00 0.00 0.00 2.17
2252 2393 8.946085 GTGAATGTGATAGGATTTACAGTGAAA 58.054 33.333 0.00 0.00 0.00 2.69
2302 2452 6.869388 GCTCTTATATTTCTTTACGGAGGGAG 59.131 42.308 0.00 0.00 0.00 4.30
2303 2453 6.516194 CGCTCTTATATTTCTTTACGGAGGGA 60.516 42.308 0.00 0.00 34.63 4.20
2304 2454 5.634020 CGCTCTTATATTTCTTTACGGAGGG 59.366 44.000 0.00 0.00 0.00 4.30
2305 2455 6.214399 ACGCTCTTATATTTCTTTACGGAGG 58.786 40.000 0.00 0.00 0.00 4.30
2306 2456 7.695869 AACGCTCTTATATTTCTTTACGGAG 57.304 36.000 0.00 0.00 0.00 4.63
2307 2457 9.241317 CTAAACGCTCTTATATTTCTTTACGGA 57.759 33.333 0.00 0.00 0.00 4.69
2308 2458 9.241317 TCTAAACGCTCTTATATTTCTTTACGG 57.759 33.333 0.00 0.00 0.00 4.02
2320 2470 9.900710 CATAAGTAGTGATCTAAACGCTCTTAT 57.099 33.333 0.00 0.00 33.79 1.73
2321 2471 7.861372 GCATAAGTAGTGATCTAAACGCTCTTA 59.139 37.037 0.00 0.00 0.00 2.10
2322 2472 6.697892 GCATAAGTAGTGATCTAAACGCTCTT 59.302 38.462 0.00 0.00 0.00 2.85
2323 2473 6.210078 GCATAAGTAGTGATCTAAACGCTCT 58.790 40.000 0.00 0.00 0.00 4.09
2324 2474 5.402867 GGCATAAGTAGTGATCTAAACGCTC 59.597 44.000 0.00 0.00 0.00 5.03
2325 2475 5.069251 AGGCATAAGTAGTGATCTAAACGCT 59.931 40.000 0.00 0.00 0.00 5.07
2326 2476 5.290386 AGGCATAAGTAGTGATCTAAACGC 58.710 41.667 0.00 0.00 0.00 4.84
2327 2477 6.421202 GGAAGGCATAAGTAGTGATCTAAACG 59.579 42.308 0.00 0.00 0.00 3.60
2328 2478 7.501844 AGGAAGGCATAAGTAGTGATCTAAAC 58.498 38.462 0.00 0.00 0.00 2.01
2329 2479 7.344612 TGAGGAAGGCATAAGTAGTGATCTAAA 59.655 37.037 0.00 0.00 0.00 1.85
2330 2480 6.839134 TGAGGAAGGCATAAGTAGTGATCTAA 59.161 38.462 0.00 0.00 0.00 2.10
2331 2481 6.373759 TGAGGAAGGCATAAGTAGTGATCTA 58.626 40.000 0.00 0.00 0.00 1.98
2332 2482 5.211973 TGAGGAAGGCATAAGTAGTGATCT 58.788 41.667 0.00 0.00 0.00 2.75
2333 2483 5.069781 ACTGAGGAAGGCATAAGTAGTGATC 59.930 44.000 0.00 0.00 0.00 2.92
2334 2484 4.965532 ACTGAGGAAGGCATAAGTAGTGAT 59.034 41.667 0.00 0.00 0.00 3.06
2335 2485 4.353777 ACTGAGGAAGGCATAAGTAGTGA 58.646 43.478 0.00 0.00 0.00 3.41
2336 2486 4.744795 ACTGAGGAAGGCATAAGTAGTG 57.255 45.455 0.00 0.00 0.00 2.74
2337 2487 7.419172 GGAATAACTGAGGAAGGCATAAGTAGT 60.419 40.741 0.00 0.00 0.00 2.73
2351 2501 9.177608 TGATCAACATAAAAGGAATAACTGAGG 57.822 33.333 0.00 0.00 0.00 3.86
2407 2557 1.073923 GTGACTCCCCTGTGAAATGGT 59.926 52.381 0.00 0.00 0.00 3.55
2811 2962 2.996621 CTCTTCCTCTAAACAACCGCAG 59.003 50.000 0.00 0.00 0.00 5.18
2816 2967 4.214332 CACAAGGCTCTTCCTCTAAACAAC 59.786 45.833 0.00 0.00 46.94 3.32
2881 3032 6.943146 TGGTACTGTAATAAAAATGCCAGACA 59.057 34.615 0.00 0.00 0.00 3.41
2935 3086 3.325293 TTGAGTTGCAAAAGCACCAAA 57.675 38.095 0.00 0.00 32.46 3.28
2942 3093 9.334693 GTGAATAGACTAATTGAGTTGCAAAAG 57.665 33.333 0.00 0.00 39.06 2.27
3022 3173 6.603201 TGCAGAAGGCTATAGTTTGCTAATTT 59.397 34.615 0.84 0.00 45.15 1.82
3023 3174 6.122277 TGCAGAAGGCTATAGTTTGCTAATT 58.878 36.000 0.84 0.00 45.15 1.40
3158 3409 2.740506 TTTGGACGGAGGGAGTTTTT 57.259 45.000 0.00 0.00 0.00 1.94
3159 3410 2.740506 TTTTGGACGGAGGGAGTTTT 57.259 45.000 0.00 0.00 0.00 2.43
3160 3411 2.971901 ATTTTGGACGGAGGGAGTTT 57.028 45.000 0.00 0.00 0.00 2.66
3161 3412 3.329814 ACTTATTTTGGACGGAGGGAGTT 59.670 43.478 0.00 0.00 0.00 3.01
3162 3413 2.910977 ACTTATTTTGGACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
3163 3414 3.270877 CACTTATTTTGGACGGAGGGAG 58.729 50.000 0.00 0.00 0.00 4.30
3164 3415 2.640826 ACACTTATTTTGGACGGAGGGA 59.359 45.455 0.00 0.00 0.00 4.20
3165 3416 3.007635 GACACTTATTTTGGACGGAGGG 58.992 50.000 0.00 0.00 0.00 4.30
3166 3417 3.933332 GAGACACTTATTTTGGACGGAGG 59.067 47.826 0.00 0.00 0.00 4.30
3167 3418 4.566004 TGAGACACTTATTTTGGACGGAG 58.434 43.478 0.00 0.00 0.00 4.63
3168 3419 4.610605 TGAGACACTTATTTTGGACGGA 57.389 40.909 0.00 0.00 0.00 4.69
3169 3420 4.755123 AGTTGAGACACTTATTTTGGACGG 59.245 41.667 0.00 0.00 0.00 4.79
3170 3421 5.924475 AGTTGAGACACTTATTTTGGACG 57.076 39.130 0.00 0.00 0.00 4.79
3171 3422 7.480810 ACAAAGTTGAGACACTTATTTTGGAC 58.519 34.615 0.00 0.00 35.87 4.02
3172 3423 7.639113 ACAAAGTTGAGACACTTATTTTGGA 57.361 32.000 0.00 0.00 35.87 3.53
3173 3424 8.621286 AGTACAAAGTTGAGACACTTATTTTGG 58.379 33.333 0.00 0.00 35.87 3.28
3179 3430 9.880157 AAAGTTAGTACAAAGTTGAGACACTTA 57.120 29.630 0.00 0.00 35.87 2.24
3180 3431 8.788325 AAAGTTAGTACAAAGTTGAGACACTT 57.212 30.769 0.00 0.98 38.74 3.16
3181 3432 9.530633 CTAAAGTTAGTACAAAGTTGAGACACT 57.469 33.333 0.00 0.00 0.00 3.55
3182 3433 9.310716 ACTAAAGTTAGTACAAAGTTGAGACAC 57.689 33.333 1.81 0.00 41.92 3.67
3207 3458 6.856426 GTCTCAACCTTAGTGCAATTTTGTAC 59.144 38.462 0.00 3.66 42.99 2.90
3208 3459 6.544197 TGTCTCAACCTTAGTGCAATTTTGTA 59.456 34.615 0.00 0.00 0.00 2.41
3209 3460 5.359576 TGTCTCAACCTTAGTGCAATTTTGT 59.640 36.000 0.00 0.00 0.00 2.83
3210 3461 5.830912 TGTCTCAACCTTAGTGCAATTTTG 58.169 37.500 0.00 0.00 0.00 2.44
3211 3462 6.655078 ATGTCTCAACCTTAGTGCAATTTT 57.345 33.333 0.00 0.00 0.00 1.82
3212 3463 6.655078 AATGTCTCAACCTTAGTGCAATTT 57.345 33.333 0.00 0.00 0.00 1.82
3213 3464 6.655078 AAATGTCTCAACCTTAGTGCAATT 57.345 33.333 0.00 0.00 0.00 2.32
3214 3465 7.944729 ATAAATGTCTCAACCTTAGTGCAAT 57.055 32.000 0.00 0.00 0.00 3.56
3215 3466 7.759489 AATAAATGTCTCAACCTTAGTGCAA 57.241 32.000 0.00 0.00 0.00 4.08
3216 3467 7.759489 AAATAAATGTCTCAACCTTAGTGCA 57.241 32.000 0.00 0.00 0.00 4.57
3217 3468 7.542130 CCAAAATAAATGTCTCAACCTTAGTGC 59.458 37.037 0.00 0.00 0.00 4.40
3218 3469 8.028938 CCCAAAATAAATGTCTCAACCTTAGTG 58.971 37.037 0.00 0.00 0.00 2.74
3219 3470 7.947890 TCCCAAAATAAATGTCTCAACCTTAGT 59.052 33.333 0.00 0.00 0.00 2.24
3220 3471 8.244113 GTCCCAAAATAAATGTCTCAACCTTAG 58.756 37.037 0.00 0.00 0.00 2.18
3221 3472 7.094549 CGTCCCAAAATAAATGTCTCAACCTTA 60.095 37.037 0.00 0.00 0.00 2.69
3222 3473 6.294508 CGTCCCAAAATAAATGTCTCAACCTT 60.295 38.462 0.00 0.00 0.00 3.50
3223 3474 5.183140 CGTCCCAAAATAAATGTCTCAACCT 59.817 40.000 0.00 0.00 0.00 3.50
3224 3475 5.399013 CGTCCCAAAATAAATGTCTCAACC 58.601 41.667 0.00 0.00 0.00 3.77
3225 3476 5.182380 TCCGTCCCAAAATAAATGTCTCAAC 59.818 40.000 0.00 0.00 0.00 3.18
3226 3477 5.317808 TCCGTCCCAAAATAAATGTCTCAA 58.682 37.500 0.00 0.00 0.00 3.02
3227 3478 4.912586 TCCGTCCCAAAATAAATGTCTCA 58.087 39.130 0.00 0.00 0.00 3.27
3228 3479 4.335594 CCTCCGTCCCAAAATAAATGTCTC 59.664 45.833 0.00 0.00 0.00 3.36
3229 3480 4.270008 CCTCCGTCCCAAAATAAATGTCT 58.730 43.478 0.00 0.00 0.00 3.41
3230 3481 3.380320 CCCTCCGTCCCAAAATAAATGTC 59.620 47.826 0.00 0.00 0.00 3.06
3231 3482 3.010808 TCCCTCCGTCCCAAAATAAATGT 59.989 43.478 0.00 0.00 0.00 2.71
3232 3483 3.626930 TCCCTCCGTCCCAAAATAAATG 58.373 45.455 0.00 0.00 0.00 2.32
3233 3484 3.268595 ACTCCCTCCGTCCCAAAATAAAT 59.731 43.478 0.00 0.00 0.00 1.40
3234 3485 2.645797 ACTCCCTCCGTCCCAAAATAAA 59.354 45.455 0.00 0.00 0.00 1.40
3235 3486 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
3236 3487 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
3237 3488 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
3238 3489 1.732117 TTACTCCCTCCGTCCCAAAA 58.268 50.000 0.00 0.00 0.00 2.44
3239 3490 1.732117 TTTACTCCCTCCGTCCCAAA 58.268 50.000 0.00 0.00 0.00 3.28
3240 3491 1.961133 ATTTACTCCCTCCGTCCCAA 58.039 50.000 0.00 0.00 0.00 4.12
3241 3492 2.292389 TGTATTTACTCCCTCCGTCCCA 60.292 50.000 0.00 0.00 0.00 4.37
3242 3493 2.391678 TGTATTTACTCCCTCCGTCCC 58.608 52.381 0.00 0.00 0.00 4.46
3243 3494 4.684484 ATTGTATTTACTCCCTCCGTCC 57.316 45.455 0.00 0.00 0.00 4.79
3244 3495 5.069516 TGGTATTGTATTTACTCCCTCCGTC 59.930 44.000 0.00 0.00 0.00 4.79
3245 3496 4.964262 TGGTATTGTATTTACTCCCTCCGT 59.036 41.667 0.00 0.00 0.00 4.69
3246 3497 5.070047 ACTGGTATTGTATTTACTCCCTCCG 59.930 44.000 0.00 0.00 0.00 4.63
3247 3498 6.496144 ACTGGTATTGTATTTACTCCCTCC 57.504 41.667 0.00 0.00 0.00 4.30
3248 3499 7.201705 GCAAACTGGTATTGTATTTACTCCCTC 60.202 40.741 0.00 0.00 0.00 4.30
3249 3500 6.602009 GCAAACTGGTATTGTATTTACTCCCT 59.398 38.462 0.00 0.00 0.00 4.20
3250 3501 6.602009 AGCAAACTGGTATTGTATTTACTCCC 59.398 38.462 0.00 0.00 0.00 4.30
3251 3502 7.553044 AGAGCAAACTGGTATTGTATTTACTCC 59.447 37.037 0.00 0.00 0.00 3.85
3252 3503 8.494016 AGAGCAAACTGGTATTGTATTTACTC 57.506 34.615 0.00 0.00 0.00 2.59
3253 3504 8.863872 AAGAGCAAACTGGTATTGTATTTACT 57.136 30.769 0.00 0.00 27.34 2.24
3254 3505 9.341899 CAAAGAGCAAACTGGTATTGTATTTAC 57.658 33.333 0.00 0.00 29.13 2.01
3255 3506 9.290988 TCAAAGAGCAAACTGGTATTGTATTTA 57.709 29.630 0.00 0.00 29.13 1.40
3256 3507 8.177119 TCAAAGAGCAAACTGGTATTGTATTT 57.823 30.769 0.00 0.00 29.13 1.40
3257 3508 7.759489 TCAAAGAGCAAACTGGTATTGTATT 57.241 32.000 0.00 0.00 29.13 1.89
3258 3509 7.230510 TGTTCAAAGAGCAAACTGGTATTGTAT 59.769 33.333 0.00 0.00 29.13 2.29
3259 3510 6.544197 TGTTCAAAGAGCAAACTGGTATTGTA 59.456 34.615 0.00 0.00 29.13 2.41
3260 3511 5.359576 TGTTCAAAGAGCAAACTGGTATTGT 59.640 36.000 0.00 0.00 29.13 2.71
3261 3512 5.830912 TGTTCAAAGAGCAAACTGGTATTG 58.169 37.500 0.00 0.00 29.13 1.90
3262 3513 6.655078 ATGTTCAAAGAGCAAACTGGTATT 57.345 33.333 0.00 0.00 29.85 1.89
3263 3514 6.491403 AGAATGTTCAAAGAGCAAACTGGTAT 59.509 34.615 0.00 0.00 0.00 2.73
3264 3515 5.827797 AGAATGTTCAAAGAGCAAACTGGTA 59.172 36.000 0.00 0.00 0.00 3.25
3265 3516 4.646492 AGAATGTTCAAAGAGCAAACTGGT 59.354 37.500 0.00 0.00 0.00 4.00
3266 3517 5.192327 AGAATGTTCAAAGAGCAAACTGG 57.808 39.130 0.00 0.00 0.00 4.00
3342 3593 2.993545 TGAACGGTTTGCTTCATTTCG 58.006 42.857 0.00 0.00 0.00 3.46
3430 3684 5.716094 ACGGTTTCTGTTTTTGTTTTAGCT 58.284 33.333 0.00 0.00 0.00 3.32
3451 3705 0.395311 TAGGCTCCTGTCCCTGTACG 60.395 60.000 0.00 0.00 32.65 3.67
3519 3773 0.655733 CGTGTTTCAAGGTGCTTCGT 59.344 50.000 0.00 0.00 0.00 3.85
3552 3806 2.488545 ACAGTGTGGTAGCTCTAGAACG 59.511 50.000 0.00 0.00 0.00 3.95
3570 3824 6.146837 CGCTGATCATCCTAAATTCCTAACAG 59.853 42.308 0.00 0.00 0.00 3.16
3605 3859 2.135933 CTGGACCTGACAAGACGAAAC 58.864 52.381 0.00 0.00 0.00 2.78
3610 3864 0.389166 CGAGCTGGACCTGACAAGAC 60.389 60.000 1.91 0.00 0.00 3.01
3617 3871 2.046892 CAACCCGAGCTGGACCTG 60.047 66.667 0.00 0.00 42.00 4.00
3618 3872 4.021925 GCAACCCGAGCTGGACCT 62.022 66.667 0.00 0.00 42.00 3.85
3663 3917 1.896220 TTGCACCTCAACCTGATGAC 58.104 50.000 0.00 0.00 0.00 3.06
3692 3946 1.133407 AGGAGCTTCGTGTCTTCGATC 59.867 52.381 0.00 0.00 39.57 3.69
3804 4058 3.410958 GCCTAGGCGCACTTAAGC 58.589 61.111 20.16 0.00 0.00 3.09
3815 4069 1.099689 GCTATCGCCTAGAGCCTAGG 58.900 60.000 18.85 18.85 36.38 3.02
3816 4070 1.827681 TGCTATCGCCTAGAGCCTAG 58.172 55.000 0.00 3.06 41.98 3.02
3817 4071 2.287977 TTGCTATCGCCTAGAGCCTA 57.712 50.000 0.00 0.00 41.98 3.93
3818 4072 1.414158 TTTGCTATCGCCTAGAGCCT 58.586 50.000 0.00 0.00 41.98 4.58
3819 4073 1.867865 GTTTTGCTATCGCCTAGAGCC 59.132 52.381 0.00 0.00 41.98 4.70
3820 4074 1.523095 CGTTTTGCTATCGCCTAGAGC 59.477 52.381 0.00 0.00 43.02 4.09
3821 4075 1.523095 GCGTTTTGCTATCGCCTAGAG 59.477 52.381 0.00 0.00 43.41 2.43
3822 4076 1.567504 GCGTTTTGCTATCGCCTAGA 58.432 50.000 0.00 0.00 43.41 2.43
3869 4123 3.965209 GCATGCTTATGCGCAATTATG 57.035 42.857 17.11 15.61 44.06 1.90
3884 4138 2.267188 TTTCTGATCAAAGCGCATGC 57.733 45.000 11.47 7.91 43.24 4.06
3885 4139 2.597305 GCTTTTCTGATCAAAGCGCATG 59.403 45.455 11.47 8.75 44.94 4.06
3886 4140 2.872370 GCTTTTCTGATCAAAGCGCAT 58.128 42.857 11.47 0.00 44.94 4.73
3887 4141 2.336554 GCTTTTCTGATCAAAGCGCA 57.663 45.000 11.47 0.00 44.94 6.09
3891 4145 3.985925 GCCTTGTGCTTTTCTGATCAAAG 59.014 43.478 0.00 0.00 36.87 2.77
3892 4146 3.550639 CGCCTTGTGCTTTTCTGATCAAA 60.551 43.478 0.00 0.00 38.05 2.69
3893 4147 2.030893 CGCCTTGTGCTTTTCTGATCAA 60.031 45.455 0.00 0.00 38.05 2.57
3894 4148 1.536766 CGCCTTGTGCTTTTCTGATCA 59.463 47.619 0.00 0.00 38.05 2.92
3895 4149 1.135575 CCGCCTTGTGCTTTTCTGATC 60.136 52.381 0.00 0.00 38.05 2.92
3896 4150 0.883833 CCGCCTTGTGCTTTTCTGAT 59.116 50.000 0.00 0.00 38.05 2.90
3897 4151 0.465460 ACCGCCTTGTGCTTTTCTGA 60.465 50.000 0.00 0.00 38.05 3.27
3898 4152 0.318107 CACCGCCTTGTGCTTTTCTG 60.318 55.000 0.00 0.00 38.05 3.02
3899 4153 1.455383 CCACCGCCTTGTGCTTTTCT 61.455 55.000 0.00 0.00 38.05 2.52
3900 4154 1.007387 CCACCGCCTTGTGCTTTTC 60.007 57.895 0.00 0.00 38.05 2.29
3901 4155 3.128375 CCACCGCCTTGTGCTTTT 58.872 55.556 0.00 0.00 38.05 2.27
3902 4156 3.605664 GCCACCGCCTTGTGCTTT 61.606 61.111 0.00 0.00 38.05 3.51
3903 4157 4.892965 TGCCACCGCCTTGTGCTT 62.893 61.111 0.00 0.00 38.05 3.91
3904 4158 4.892965 TTGCCACCGCCTTGTGCT 62.893 61.111 0.00 0.00 38.05 4.40
3905 4159 3.438017 TTTTGCCACCGCCTTGTGC 62.438 57.895 0.00 0.00 34.85 4.57
3906 4160 1.591327 GTTTTGCCACCGCCTTGTG 60.591 57.895 0.00 0.00 35.98 3.33
3907 4161 2.811799 GTTTTGCCACCGCCTTGT 59.188 55.556 0.00 0.00 0.00 3.16
3908 4162 2.354539 CGTTTTGCCACCGCCTTG 60.355 61.111 0.00 0.00 0.00 3.61
3909 4163 4.279043 GCGTTTTGCCACCGCCTT 62.279 61.111 0.00 0.00 41.50 4.35
3912 4166 4.560856 TGTGCGTTTTGCCACCGC 62.561 61.111 0.00 0.00 45.60 5.68
3913 4167 0.873743 AATTGTGCGTTTTGCCACCG 60.874 50.000 0.00 0.00 45.60 4.94
3914 4168 2.141535 TAATTGTGCGTTTTGCCACC 57.858 45.000 0.00 0.00 45.60 4.61
3915 4169 3.603629 GCTTTAATTGTGCGTTTTGCCAC 60.604 43.478 0.00 0.00 45.60 5.01
3916 4170 2.541762 GCTTTAATTGTGCGTTTTGCCA 59.458 40.909 0.00 0.00 45.60 4.92
3917 4171 2.096466 GGCTTTAATTGTGCGTTTTGCC 60.096 45.455 0.00 0.00 45.60 4.52
3918 4172 2.799978 AGGCTTTAATTGTGCGTTTTGC 59.200 40.909 0.00 0.00 46.70 3.68
3919 4173 4.089923 GCTAGGCTTTAATTGTGCGTTTTG 59.910 41.667 0.00 0.00 0.00 2.44
3920 4174 4.234574 GCTAGGCTTTAATTGTGCGTTTT 58.765 39.130 0.00 0.00 0.00 2.43
3921 4175 3.669557 CGCTAGGCTTTAATTGTGCGTTT 60.670 43.478 0.00 0.00 37.80 3.60
3922 4176 2.159572 CGCTAGGCTTTAATTGTGCGTT 60.160 45.455 0.00 0.00 37.80 4.84
3923 4177 1.396996 CGCTAGGCTTTAATTGTGCGT 59.603 47.619 0.00 0.00 37.80 5.24
3924 4178 1.856014 GCGCTAGGCTTTAATTGTGCG 60.856 52.381 0.00 0.00 44.10 5.34
3925 4179 1.827578 GCGCTAGGCTTTAATTGTGC 58.172 50.000 0.00 0.00 39.11 4.57
3946 4200 7.174946 GTGACCAGGAAGATCATAGTTCAAAAA 59.825 37.037 0.00 0.00 0.00 1.94
3947 4201 6.655003 GTGACCAGGAAGATCATAGTTCAAAA 59.345 38.462 0.00 0.00 0.00 2.44
3948 4202 6.173339 GTGACCAGGAAGATCATAGTTCAAA 58.827 40.000 0.00 0.00 0.00 2.69
3949 4203 5.248248 TGTGACCAGGAAGATCATAGTTCAA 59.752 40.000 0.00 0.00 0.00 2.69
3950 4204 4.777366 TGTGACCAGGAAGATCATAGTTCA 59.223 41.667 0.00 0.00 0.00 3.18
3951 4205 5.344743 TGTGACCAGGAAGATCATAGTTC 57.655 43.478 0.00 0.00 0.00 3.01
3952 4206 5.762179 TTGTGACCAGGAAGATCATAGTT 57.238 39.130 0.00 0.00 0.00 2.24
3953 4207 5.762179 TTTGTGACCAGGAAGATCATAGT 57.238 39.130 0.00 0.00 0.00 2.12
3954 4208 6.094603 CCTTTTTGTGACCAGGAAGATCATAG 59.905 42.308 0.00 0.00 0.00 2.23
3955 4209 5.945784 CCTTTTTGTGACCAGGAAGATCATA 59.054 40.000 0.00 0.00 0.00 2.15
3956 4210 4.768968 CCTTTTTGTGACCAGGAAGATCAT 59.231 41.667 0.00 0.00 0.00 2.45
3957 4211 4.144297 CCTTTTTGTGACCAGGAAGATCA 58.856 43.478 0.00 0.00 0.00 2.92
3958 4212 3.507622 CCCTTTTTGTGACCAGGAAGATC 59.492 47.826 0.00 0.00 0.00 2.75
3959 4213 3.500343 CCCTTTTTGTGACCAGGAAGAT 58.500 45.455 0.00 0.00 0.00 2.40
3960 4214 2.944129 CCCTTTTTGTGACCAGGAAGA 58.056 47.619 0.00 0.00 0.00 2.87
3961 4215 1.341209 GCCCTTTTTGTGACCAGGAAG 59.659 52.381 0.00 0.00 0.00 3.46
3962 4216 1.342474 TGCCCTTTTTGTGACCAGGAA 60.342 47.619 0.00 0.00 0.00 3.36
3963 4217 0.260230 TGCCCTTTTTGTGACCAGGA 59.740 50.000 0.00 0.00 0.00 3.86
3964 4218 1.069049 CTTGCCCTTTTTGTGACCAGG 59.931 52.381 0.00 0.00 0.00 4.45
3965 4219 1.538849 GCTTGCCCTTTTTGTGACCAG 60.539 52.381 0.00 0.00 0.00 4.00
3966 4220 0.463620 GCTTGCCCTTTTTGTGACCA 59.536 50.000 0.00 0.00 0.00 4.02
3967 4221 0.463620 TGCTTGCCCTTTTTGTGACC 59.536 50.000 0.00 0.00 0.00 4.02
3968 4222 2.407090 GATGCTTGCCCTTTTTGTGAC 58.593 47.619 0.00 0.00 0.00 3.67
3969 4223 1.344114 GGATGCTTGCCCTTTTTGTGA 59.656 47.619 0.00 0.00 0.00 3.58
3970 4224 1.608801 GGGATGCTTGCCCTTTTTGTG 60.609 52.381 0.00 0.00 42.56 3.33
3971 4225 0.686789 GGGATGCTTGCCCTTTTTGT 59.313 50.000 0.00 0.00 42.56 2.83
3972 4226 0.390209 CGGGATGCTTGCCCTTTTTG 60.390 55.000 4.48 0.00 43.72 2.44
3973 4227 1.543944 CCGGGATGCTTGCCCTTTTT 61.544 55.000 4.48 0.00 43.72 1.94
4039 4293 2.187946 CCAGGCTCGCCACTAAGG 59.812 66.667 11.02 0.33 38.92 2.69
4049 4303 0.668401 GCAAACATTGTGCCAGGCTC 60.668 55.000 14.15 10.17 35.91 4.70
4073 4327 2.753029 GGCACCTGAGCACCTCTT 59.247 61.111 0.00 0.00 35.83 2.85
4093 4347 0.743097 GGCATTCAATCTGGTGAGGC 59.257 55.000 0.00 0.00 0.00 4.70
4134 4388 4.657824 ACACCGAGTTGTCCGCCG 62.658 66.667 0.00 0.00 0.00 6.46
4154 4408 1.419374 CAGTACACAGTGAAGTCCGC 58.581 55.000 7.81 0.00 0.00 5.54
4211 4465 1.379044 CACCATGGTTCTGCCCCTC 60.379 63.158 16.84 0.00 36.04 4.30
4229 4485 0.171455 ACTTGGCTGAGATCGTCGAC 59.829 55.000 5.18 5.18 0.00 4.20
4237 4493 3.072915 TGAATTTCTCCACTTGGCTGAGA 59.927 43.478 0.00 0.00 33.50 3.27
4240 4496 3.822735 TCTTGAATTTCTCCACTTGGCTG 59.177 43.478 0.00 0.00 34.44 4.85
4326 4582 2.125269 CAAGGGGCGAAGGGTACG 60.125 66.667 0.00 0.00 0.00 3.67
4347 4603 0.751643 GCAGTGGTTGGGACTTGTGT 60.752 55.000 0.00 0.00 0.00 3.72
4357 4613 2.086869 CTATGGTCTTGGCAGTGGTTG 58.913 52.381 0.00 0.00 0.00 3.77
4381 4637 2.502295 GGCAATCTATCAAGGAGCTGG 58.498 52.381 0.00 0.00 0.00 4.85
4399 4655 1.369321 GATCACTGGATCGAGGGGC 59.631 63.158 7.18 0.00 40.50 5.80
4415 4671 3.291584 TCGAGCACTATTCTGGACAGAT 58.708 45.455 2.42 0.00 37.29 2.90
4494 4750 5.652452 GGGCAAAATTACTACTCAAGGTCAT 59.348 40.000 0.00 0.00 0.00 3.06
4535 4791 1.153489 CCATGTCTGCAGAGGTCCG 60.153 63.158 18.89 4.12 0.00 4.79
4542 4798 1.140452 ACTCATAGGCCATGTCTGCAG 59.860 52.381 7.63 7.63 35.96 4.41
4565 4821 0.548031 GAAGATGGGATGGGTGCTGA 59.452 55.000 0.00 0.00 0.00 4.26
4569 4825 3.815133 CCAGAAGATGGGATGGGTG 57.185 57.895 0.00 0.00 46.36 4.61
4606 4863 3.110178 GTCCGGTCGAGTTTGGCG 61.110 66.667 0.00 0.00 0.00 5.69
4612 4869 3.608662 TTTGCCGTCCGGTCGAGT 61.609 61.111 22.77 0.00 37.65 4.18
4657 4914 2.186826 CACCGGGATTCGAATGGCC 61.187 63.158 16.96 11.35 42.43 5.36
4664 4921 2.100631 GTGTGCTCACCGGGATTCG 61.101 63.158 6.32 0.00 38.51 3.34
4703 4960 0.323629 TTAGGGAAGCCACCGACAAG 59.676 55.000 0.00 0.00 0.00 3.16
4705 4962 1.980052 CTTAGGGAAGCCACCGACA 59.020 57.895 0.00 0.00 0.00 4.35
4733 4990 5.450550 CCAGACTATGTTTGCTGTCGAGATA 60.451 44.000 0.00 0.00 34.92 1.98
4817 5074 2.063015 TTGCCGGTTGATGGACTGGT 62.063 55.000 1.90 0.00 45.96 4.00
4875 5132 2.649190 CTCTTGATCTGGAGAGACGGA 58.351 52.381 12.95 0.00 41.49 4.69
4879 5137 1.062581 CCCCCTCTTGATCTGGAGAGA 60.063 57.143 17.42 4.03 41.49 3.10
4971 5229 2.558359 ACAGGTCTGCACATAAAAAGCC 59.442 45.455 0.00 0.00 0.00 4.35
4978 5236 1.207089 GTGGCTACAGGTCTGCACATA 59.793 52.381 0.00 0.00 0.00 2.29
5415 5764 0.319986 GCCTCCCGCTAACTGCTATC 60.320 60.000 0.00 0.00 40.11 2.08
5476 7437 7.601856 CCAAGGCAATACAAATTAGAAGAACA 58.398 34.615 0.00 0.00 0.00 3.18
5480 7441 5.127682 AGGCCAAGGCAATACAAATTAGAAG 59.872 40.000 13.87 0.00 44.11 2.85
5542 7503 5.377478 GTTAGAGCCAACCCATAGCTTTAT 58.623 41.667 0.00 0.00 36.87 1.40
5592 7553 5.221185 GCTGTATATGACACTTTCCGGAGTA 60.221 44.000 3.34 0.00 33.31 2.59
5732 7693 6.744175 AGATGATGGTCATGACAGAACTAT 57.256 37.500 26.47 12.54 37.20 2.12
5768 7729 6.048509 CACCCTTCAACATGCTTTAAAGTTT 58.951 36.000 16.38 1.99 0.00 2.66
5773 7734 3.230134 AGCACCCTTCAACATGCTTTAA 58.770 40.909 0.00 0.00 46.06 1.52
5798 7759 6.992123 TCACTTATCCCACATACATCAATCAC 59.008 38.462 0.00 0.00 0.00 3.06
5803 7764 9.337396 GTTTATTCACTTATCCCACATACATCA 57.663 33.333 0.00 0.00 0.00 3.07
5807 7768 7.773690 ACTGGTTTATTCACTTATCCCACATAC 59.226 37.037 0.00 0.00 0.00 2.39
5892 7855 1.361197 TCCCACTCCATCCTACTGTCA 59.639 52.381 0.00 0.00 0.00 3.58
5989 7952 4.657504 TCAGATCAAGAGCCTGGACATATT 59.342 41.667 0.00 0.00 0.00 1.28
6215 8180 6.003950 GGGGCATGCTTTTATTCTATACTGA 58.996 40.000 18.92 0.00 0.00 3.41
6263 8228 4.805219 ACACAACCTTGAGTTCAAAACAC 58.195 39.130 0.00 0.00 36.18 3.32
6290 8256 5.359009 AGATTGGGACTGCAAAACATATCAG 59.641 40.000 0.00 0.00 0.00 2.90
6296 8262 3.252215 CGTAAGATTGGGACTGCAAAACA 59.748 43.478 0.00 0.00 43.02 2.83
6383 8349 1.172175 CCTTTCTGGAGCAAGCTTCC 58.828 55.000 0.00 0.00 38.35 3.46
6449 8415 2.353889 CTCATTTGCTGTTCCCTCATCG 59.646 50.000 0.00 0.00 0.00 3.84
6452 8418 1.887956 GCCTCATTTGCTGTTCCCTCA 60.888 52.381 0.00 0.00 0.00 3.86
6484 8450 4.168101 AGTAGACAGTGAATCAAAGGGGA 58.832 43.478 0.00 0.00 0.00 4.81
6723 10356 0.250901 ATGCAGTGTCGCCCTTCTTT 60.251 50.000 0.00 0.00 0.00 2.52
7059 10734 2.440501 CAACGCCTCGCATAAATTGTC 58.559 47.619 0.00 0.00 0.00 3.18
7373 11052 1.610522 GAACTCAAGCACTTGTGGCAT 59.389 47.619 14.82 3.40 41.16 4.40
7434 11114 9.988815 ACTAGAATAATGGTGATGATACTTCAC 57.011 33.333 0.00 0.00 42.20 3.18
7639 11319 2.100989 ACGTTGGTATCTCCTCTGTCC 58.899 52.381 0.00 0.00 37.07 4.02
7711 11401 2.695314 GGCGACCTGGATGAACATC 58.305 57.895 0.00 6.28 37.11 3.06
7712 11402 4.963878 GGCGACCTGGATGAACAT 57.036 55.556 0.00 0.00 0.00 2.71
7727 11417 1.106285 CCTCTTTTATGTGGCAGGGC 58.894 55.000 0.00 0.00 0.00 5.19
7751 11441 4.651045 AGATGGCAACCTTTTCTTTTCTGT 59.349 37.500 0.00 0.00 0.00 3.41
7752 11442 4.986659 CAGATGGCAACCTTTTCTTTTCTG 59.013 41.667 0.00 0.00 0.00 3.02
7767 11460 2.929641 TGTTTGACAGAACAGATGGCA 58.070 42.857 0.00 0.00 34.77 4.92
7884 11580 4.341783 ACAGTGCCCAGCTGAGCC 62.342 66.667 18.37 9.07 37.40 4.70
8122 11818 9.231297 TCCATTACCAGAACAAGAGAAAAATAG 57.769 33.333 0.00 0.00 0.00 1.73
8124 11820 7.505585 TGTCCATTACCAGAACAAGAGAAAAAT 59.494 33.333 0.00 0.00 0.00 1.82
8148 11845 5.278957 GCTTGGAGTACATTTTGGATGTTGT 60.279 40.000 0.00 0.00 33.76 3.32
8149 11846 5.047802 AGCTTGGAGTACATTTTGGATGTTG 60.048 40.000 0.00 0.00 33.76 3.33
8150 11847 5.079643 AGCTTGGAGTACATTTTGGATGTT 58.920 37.500 0.00 0.00 33.76 2.71
8151 11848 4.666512 AGCTTGGAGTACATTTTGGATGT 58.333 39.130 0.00 0.00 36.13 3.06
8198 11896 5.463061 GGCGCTGGTATTTATAAAGAACGTA 59.537 40.000 7.64 0.00 0.00 3.57
8213 11911 0.036164 ATGAAACTGTGGCGCTGGTA 59.964 50.000 7.64 0.00 0.00 3.25


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.