Multiple sequence alignment - TraesCS7D01G323500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G323500 chr7D 100.000 8344 0 0 1 8344 413231254 413239597 0.000000e+00 15409.0
1 TraesCS7D01G323500 chr7D 91.026 156 14 0 1667 1822 160532376 160532531 2.360000e-50 211.0
2 TraesCS7D01G323500 chr7D 93.023 86 6 0 2766 2851 413234104 413234019 8.790000e-25 126.0
3 TraesCS7D01G323500 chr7B 94.449 3531 126 32 4542 8019 427703148 427706661 0.000000e+00 5371.0
4 TraesCS7D01G323500 chr7B 92.110 1597 69 11 1822 3393 427700200 427701764 0.000000e+00 2198.0
5 TraesCS7D01G323500 chr7B 97.660 812 18 1 3395 4206 427701929 427702739 0.000000e+00 1393.0
6 TraesCS7D01G323500 chr7B 91.280 1055 36 12 396 1426 427698989 427700011 0.000000e+00 1387.0
7 TraesCS7D01G323500 chr7B 96.183 393 13 1 4159 4551 427702731 427703121 7.060000e-180 641.0
8 TraesCS7D01G323500 chr7B 91.294 425 31 6 1 421 427698622 427699044 7.260000e-160 575.0
9 TraesCS7D01G323500 chr7B 85.317 252 26 10 7981 8224 427706698 427706946 5.000000e-62 250.0
10 TraesCS7D01G323500 chr7B 89.130 184 19 1 1455 1638 427700011 427700193 2.340000e-55 228.0
11 TraesCS7D01G323500 chr7B 92.045 88 7 0 2764 2851 138742430 138742343 3.160000e-24 124.0
12 TraesCS7D01G323500 chr7B 90.566 53 3 1 1604 1656 482485035 482484985 1.500000e-07 69.4
13 TraesCS7D01G323500 chr7A 95.085 3113 111 19 5103 8195 474734242 474737332 0.000000e+00 4863.0
14 TraesCS7D01G323500 chr7A 93.604 2783 102 20 1822 4551 474730842 474733601 0.000000e+00 4084.0
15 TraesCS7D01G323500 chr7A 93.317 1227 53 8 432 1644 474729630 474730841 0.000000e+00 1784.0
16 TraesCS7D01G323500 chr7A 92.525 602 20 9 4542 5118 474733628 474734229 0.000000e+00 839.0
17 TraesCS7D01G323500 chr7A 93.548 155 8 1 1667 1819 47551873 47551719 6.510000e-56 230.0
18 TraesCS7D01G323500 chr7A 90.323 155 14 1 1663 1817 31593966 31594119 1.420000e-47 202.0
19 TraesCS7D01G323500 chr7A 93.333 45 2 1 1600 1644 190472978 190473021 1.940000e-06 65.8
20 TraesCS7D01G323500 chr5D 93.464 153 10 0 1668 1820 464324442 464324290 2.340000e-55 228.0
21 TraesCS7D01G323500 chr5D 97.436 39 1 0 1822 1860 563971404 563971442 5.410000e-07 67.6
22 TraesCS7D01G323500 chr4B 93.464 153 10 0 1668 1820 435908292 435908444 2.340000e-55 228.0
23 TraesCS7D01G323500 chr4B 93.966 116 5 2 8078 8192 562056487 562056601 3.100000e-39 174.0
24 TraesCS7D01G323500 chr3A 92.958 142 9 1 1670 1811 160308394 160308534 1.100000e-48 206.0
25 TraesCS7D01G323500 chr3A 97.674 43 1 0 1604 1646 728992492 728992450 3.230000e-09 75.0
26 TraesCS7D01G323500 chr5A 90.541 148 14 0 1672 1819 325370444 325370591 6.610000e-46 196.0
27 TraesCS7D01G323500 chr5A 89.404 151 15 1 1668 1818 23916520 23916371 1.110000e-43 189.0
28 TraesCS7D01G323500 chr2A 90.066 151 15 0 1667 1817 769001242 769001092 6.610000e-46 196.0
29 TraesCS7D01G323500 chr2A 97.087 103 2 1 8074 8175 771511433 771511535 1.110000e-38 172.0
30 TraesCS7D01G323500 chr2A 93.023 86 6 0 2766 2851 51032692 51032607 8.790000e-25 126.0
31 TraesCS7D01G323500 chr2A 83.333 84 11 2 3698 3781 771189055 771188975 3.230000e-09 75.0
32 TraesCS7D01G323500 chr2A 95.238 42 2 0 1819 1860 754187056 754187097 5.410000e-07 67.6
33 TraesCS7D01G323500 chr4D 96.117 103 4 0 8084 8186 472487441 472487543 1.440000e-37 169.0
34 TraesCS7D01G323500 chr4D 90.984 122 7 4 8074 8192 449462699 449462819 2.410000e-35 161.0
35 TraesCS7D01G323500 chr1D 92.174 115 7 2 8081 8193 379472584 379472698 2.410000e-35 161.0
36 TraesCS7D01G323500 chr1D 100.000 28 0 0 1822 1849 493991829 493991856 1.500000e-02 52.8
37 TraesCS7D01G323500 chr1A 97.849 93 2 0 8084 8176 480566327 480566419 2.410000e-35 161.0
38 TraesCS7D01G323500 chr4A 91.525 118 6 2 8075 8192 17386988 17386875 8.670000e-35 159.0
39 TraesCS7D01G323500 chr6A 92.135 89 6 1 2767 2854 609314535 609314447 3.160000e-24 124.0
40 TraesCS7D01G323500 chr6A 91.209 91 6 2 2766 2855 609314450 609314539 1.140000e-23 122.0
41 TraesCS7D01G323500 chr6A 89.286 56 3 3 1599 1654 604890753 604890701 5.410000e-07 67.6
42 TraesCS7D01G323500 chr3B 85.185 81 8 3 1568 1644 423810099 423810179 6.940000e-11 80.5
43 TraesCS7D01G323500 chr3B 89.831 59 4 2 1596 1653 482487891 482487834 3.230000e-09 75.0
44 TraesCS7D01G323500 chr2D 95.349 43 2 0 1821 1863 88082841 88082799 1.500000e-07 69.4
45 TraesCS7D01G323500 chr1B 91.837 49 3 1 1596 1644 3949839 3949886 5.410000e-07 67.6
46 TraesCS7D01G323500 chr3D 100.000 33 0 0 1817 1849 397781606 397781638 2.510000e-05 62.1
47 TraesCS7D01G323500 chr6D 100.000 28 0 0 400 427 444089259 444089286 1.500000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G323500 chr7D 413231254 413239597 8343 False 15409.000 15409 100.000000 1 8344 1 chr7D.!!$F2 8343
1 TraesCS7D01G323500 chr7B 427698622 427706946 8324 False 1505.375 5371 92.177875 1 8224 8 chr7B.!!$F1 8223
2 TraesCS7D01G323500 chr7A 474729630 474737332 7702 False 2892.500 4863 93.632750 432 8195 4 chr7A.!!$F3 7763

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
936 962 0.107703 ATCGGAGGATTTGCTTCGCA 60.108 50.000 0.00 0.00 36.47 5.10 F
1743 1792 0.248743 GCCGGACATGCACATGATTG 60.249 55.000 17.19 5.85 41.20 2.67 F
2345 2405 0.106918 CCTTAGCCGGGTAATGCCAA 60.107 55.000 25.35 5.32 39.65 4.52 F
2349 2409 0.324275 AGCCGGGTAATGCCAATGTT 60.324 50.000 3.10 0.00 39.65 2.71 F
2350 2410 0.534873 GCCGGGTAATGCCAATGTTT 59.465 50.000 2.18 0.00 39.65 2.83 F
2351 2411 1.066502 GCCGGGTAATGCCAATGTTTT 60.067 47.619 2.18 0.00 39.65 2.43 F
2382 2442 1.084018 AACATGACCAGGGGGACAAT 58.916 50.000 0.00 0.00 42.05 2.71 F
4894 5258 0.623723 GACCCCATCCTGCCTAACAA 59.376 55.000 0.00 0.00 0.00 2.83 F
5833 6228 2.168521 GCTCACCTGCCTAGTCATTACA 59.831 50.000 0.00 0.00 0.00 2.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1795 1844 0.250166 AAACTGCTACCCACACGACC 60.250 55.000 0.00 0.0 0.00 4.79 R
3274 3358 1.102154 TTGGCATAATGGGCACTTCG 58.898 50.000 0.00 0.0 43.63 3.79 R
3637 3884 1.753930 TCATTCAGCAATGGTCGCAT 58.246 45.000 0.00 0.0 40.08 4.73 R
4255 4558 4.054671 GGATTCGAGAGACACATCCAATC 58.945 47.826 5.37 0.0 42.15 2.67 R
4285 4588 8.745590 AGAAAGAATACAGGAGAGAGAAACTAC 58.254 37.037 0.00 0.0 0.00 2.73 R
4873 5215 0.623723 GTTAGGCAGGATGGGGTCAA 59.376 55.000 0.00 0.0 35.86 3.18 R
5110 5504 8.931775 ACAAAATTAACACAACAGAAAAAGGTC 58.068 29.630 0.00 0.0 0.00 3.85 R
6132 6533 0.810031 CGGTGATGATCGTTGTCCCC 60.810 60.000 0.00 0.0 0.00 4.81 R
8304 8813 0.036010 AGCACTGGAAATCGGGTCTG 60.036 55.000 0.00 0.0 0.00 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 66 2.826428 TCGATAGATGCCACTTTCAGC 58.174 47.619 0.00 0.00 42.67 4.26
73 76 1.929836 CCACTTTCAGCTAGACGATGC 59.070 52.381 0.00 0.00 0.00 3.91
95 98 5.757320 TGCATAAGACAACCAACAAAAATGG 59.243 36.000 0.00 0.00 43.84 3.16
98 101 4.400529 AGACAACCAACAAAAATGGGAC 57.599 40.909 0.00 0.00 42.48 4.46
99 102 3.133901 AGACAACCAACAAAAATGGGACC 59.866 43.478 0.00 0.00 42.48 4.46
172 175 4.321718 AGCCATCAGATCAATATCCAACG 58.678 43.478 0.00 0.00 31.98 4.10
177 180 4.948847 TCAGATCAATATCCAACGGTCAG 58.051 43.478 0.00 0.00 31.98 3.51
187 190 1.153369 AACGGTCAGGATCATGCCG 60.153 57.895 28.81 28.81 42.07 5.69
206 209 1.162800 GCGGCATGTTCATCCTCCTC 61.163 60.000 0.00 0.00 0.00 3.71
244 247 2.496291 CCTAACCGCCTACCTCCCG 61.496 68.421 0.00 0.00 0.00 5.14
246 249 3.961225 TAACCGCCTACCTCCCGCA 62.961 63.158 0.00 0.00 0.00 5.69
250 253 3.075005 GCCTACCTCCCGCAGTCA 61.075 66.667 0.00 0.00 0.00 3.41
292 295 0.468226 TTACCTCCCCATCATCGTGC 59.532 55.000 0.00 0.00 0.00 5.34
296 299 2.903855 CCCCATCATCGTGCTGGC 60.904 66.667 3.31 0.00 32.55 4.85
352 355 4.296265 GGAACAACTCCGGCGATT 57.704 55.556 9.30 0.00 33.37 3.34
368 371 1.077716 ATTCGCTGCACCCCCTTAC 60.078 57.895 0.00 0.00 0.00 2.34
369 372 2.552231 ATTCGCTGCACCCCCTTACC 62.552 60.000 0.00 0.00 0.00 2.85
370 373 4.796495 CGCTGCACCCCCTTACCC 62.796 72.222 0.00 0.00 0.00 3.69
371 374 4.442454 GCTGCACCCCCTTACCCC 62.442 72.222 0.00 0.00 0.00 4.95
372 375 2.614013 CTGCACCCCCTTACCCCT 60.614 66.667 0.00 0.00 0.00 4.79
373 376 1.307517 CTGCACCCCCTTACCCCTA 60.308 63.158 0.00 0.00 0.00 3.53
374 377 0.917333 CTGCACCCCCTTACCCCTAA 60.917 60.000 0.00 0.00 0.00 2.69
375 378 0.917333 TGCACCCCCTTACCCCTAAG 60.917 60.000 0.00 0.00 0.00 2.18
376 379 0.622446 GCACCCCCTTACCCCTAAGA 60.622 60.000 0.00 0.00 32.29 2.10
377 380 1.980230 GCACCCCCTTACCCCTAAGAT 60.980 57.143 0.00 0.00 32.29 2.40
378 381 2.698027 GCACCCCCTTACCCCTAAGATA 60.698 54.545 0.00 0.00 32.29 1.98
379 382 3.248888 CACCCCCTTACCCCTAAGATAG 58.751 54.545 0.00 0.00 32.29 2.08
380 383 3.116473 CACCCCCTTACCCCTAAGATAGA 60.116 52.174 0.00 0.00 32.29 1.98
381 384 3.744189 ACCCCCTTACCCCTAAGATAGAT 59.256 47.826 0.00 0.00 32.29 1.98
382 385 4.937116 ACCCCCTTACCCCTAAGATAGATA 59.063 45.833 0.00 0.00 32.29 1.98
383 386 5.383901 ACCCCCTTACCCCTAAGATAGATAA 59.616 44.000 0.00 0.00 32.29 1.75
384 387 5.965091 CCCCCTTACCCCTAAGATAGATAAG 59.035 48.000 0.00 0.00 32.29 1.73
385 388 5.965091 CCCCTTACCCCTAAGATAGATAAGG 59.035 48.000 0.00 0.00 37.84 2.69
386 389 5.965091 CCCTTACCCCTAAGATAGATAAGGG 59.035 48.000 17.43 17.43 46.66 3.95
387 390 5.425862 CCTTACCCCTAAGATAGATAAGGGC 59.574 48.000 0.46 0.00 46.34 5.19
388 391 4.787003 ACCCCTAAGATAGATAAGGGCT 57.213 45.455 0.46 0.00 46.34 5.19
389 392 5.107979 ACCCCTAAGATAGATAAGGGCTT 57.892 43.478 0.46 0.00 46.34 4.35
390 393 4.846940 ACCCCTAAGATAGATAAGGGCTTG 59.153 45.833 0.46 0.00 46.34 4.01
391 394 4.846940 CCCCTAAGATAGATAAGGGCTTGT 59.153 45.833 0.46 0.00 46.34 3.16
392 395 5.280215 CCCCTAAGATAGATAAGGGCTTGTG 60.280 48.000 0.46 0.00 46.34 3.33
393 396 5.280215 CCCTAAGATAGATAAGGGCTTGTGG 60.280 48.000 0.00 0.00 42.22 4.17
394 397 4.713792 AAGATAGATAAGGGCTTGTGGG 57.286 45.455 0.00 0.00 0.00 4.61
395 398 3.669949 AGATAGATAAGGGCTTGTGGGT 58.330 45.455 0.00 0.00 0.00 4.51
396 399 4.047883 AGATAGATAAGGGCTTGTGGGTT 58.952 43.478 0.00 0.00 0.00 4.11
397 400 4.478686 AGATAGATAAGGGCTTGTGGGTTT 59.521 41.667 0.00 0.00 0.00 3.27
424 427 7.786943 CCCCTAAGATAGATAATGAGGCTATGA 59.213 40.741 0.00 0.00 0.00 2.15
429 432 9.545928 AAGATAGATAATGAGGCTATGACTTCT 57.454 33.333 0.00 0.00 0.00 2.85
430 433 9.545928 AGATAGATAATGAGGCTATGACTTCTT 57.454 33.333 0.00 0.00 0.00 2.52
450 453 4.232122 TCTTCCTAAGATAGACAGTGGGGA 59.768 45.833 0.00 0.00 31.20 4.81
486 489 0.325671 AGATCCCTTCTTCTCCGGCA 60.326 55.000 0.00 0.00 0.00 5.69
493 496 1.532604 TTCTTCTCCGGCAAGCTCGA 61.533 55.000 0.00 0.00 0.00 4.04
509 512 5.906113 AGCTCGAGATGAACTAGAAAAGA 57.094 39.130 18.75 0.00 30.48 2.52
510 513 6.274157 AGCTCGAGATGAACTAGAAAAGAA 57.726 37.500 18.75 0.00 30.48 2.52
511 514 6.692486 AGCTCGAGATGAACTAGAAAAGAAA 58.308 36.000 18.75 0.00 30.48 2.52
512 515 7.155328 AGCTCGAGATGAACTAGAAAAGAAAA 58.845 34.615 18.75 0.00 30.48 2.29
513 516 7.330700 AGCTCGAGATGAACTAGAAAAGAAAAG 59.669 37.037 18.75 0.00 30.48 2.27
532 535 2.795329 AGGTGACTGGCGAAATGAAAT 58.205 42.857 0.00 0.00 41.13 2.17
533 536 3.157087 AGGTGACTGGCGAAATGAAATT 58.843 40.909 0.00 0.00 41.13 1.82
536 539 5.453198 AGGTGACTGGCGAAATGAAATTTTT 60.453 36.000 0.00 0.00 43.80 1.94
728 754 1.668101 GACCTCGGGAAGCTCGTCAT 61.668 60.000 0.00 0.00 0.00 3.06
893 919 3.808189 TCCCCTTCTTCTTCTCCATTCT 58.192 45.455 0.00 0.00 0.00 2.40
894 920 4.179133 TCCCCTTCTTCTTCTCCATTCTT 58.821 43.478 0.00 0.00 0.00 2.52
936 962 0.107703 ATCGGAGGATTTGCTTCGCA 60.108 50.000 0.00 0.00 36.47 5.10
984 1010 3.361977 GCGGCCGGCTCAAAGAAA 61.362 61.111 29.38 0.00 39.11 2.52
1038 1064 3.277133 CCCATCGGGCAGTTGTTG 58.723 61.111 0.00 0.00 35.35 3.33
1039 1065 2.342650 CCCATCGGGCAGTTGTTGG 61.343 63.158 0.00 0.00 35.35 3.77
1040 1066 1.303236 CCATCGGGCAGTTGTTGGA 60.303 57.895 0.00 0.00 0.00 3.53
1041 1067 1.308069 CCATCGGGCAGTTGTTGGAG 61.308 60.000 0.00 0.00 0.00 3.86
1042 1068 1.002134 ATCGGGCAGTTGTTGGAGG 60.002 57.895 0.00 0.00 0.00 4.30
1158 1193 0.326904 AGGGGGACTCTGATGATGCA 60.327 55.000 0.00 0.00 0.00 3.96
1168 1203 0.463620 TGATGATGCATCGTTCCGGA 59.536 50.000 22.04 0.00 43.14 5.14
1391 1427 5.303971 AGCAAATTCCTCTCGAATCATAGG 58.696 41.667 0.00 0.00 40.47 2.57
1396 1432 3.422796 TCCTCTCGAATCATAGGCTACC 58.577 50.000 0.00 0.00 0.00 3.18
1462 1511 1.467342 CCTTAAACCTAGTGTTGCGCC 59.533 52.381 4.18 0.00 37.23 6.53
1482 1531 5.373262 CGCCAAAATATTTCTTGCAAACAC 58.627 37.500 0.00 0.00 0.00 3.32
1485 1534 6.566376 GCCAAAATATTTCTTGCAAACACCTG 60.566 38.462 0.00 0.00 0.00 4.00
1530 1579 3.330701 AGAACTGAGGTTTGGCTGGATTA 59.669 43.478 0.00 0.00 35.58 1.75
1538 1587 3.763897 GGTTTGGCTGGATTAGACACAAT 59.236 43.478 0.00 0.00 46.52 2.71
1539 1588 4.220602 GGTTTGGCTGGATTAGACACAATT 59.779 41.667 0.00 0.00 46.52 2.32
1540 1589 5.279456 GGTTTGGCTGGATTAGACACAATTT 60.279 40.000 0.00 0.00 46.52 1.82
1541 1590 6.223120 GTTTGGCTGGATTAGACACAATTTT 58.777 36.000 0.00 0.00 46.52 1.82
1542 1591 6.418057 TTGGCTGGATTAGACACAATTTTT 57.582 33.333 0.00 0.00 46.52 1.94
1588 1637 4.663592 ACTCCCTCCGGTCCATATTAATTT 59.336 41.667 0.00 0.00 0.00 1.82
1612 1661 7.554959 TTCACTGATTTAGTAACTCCTTCCT 57.445 36.000 0.00 0.00 37.60 3.36
1645 1694 8.766000 TTAATTGTCGCTGATTTAGTACAAGA 57.234 30.769 0.00 0.00 37.62 3.02
1646 1695 7.849804 AATTGTCGCTGATTTAGTACAAGAT 57.150 32.000 0.00 0.00 37.62 2.40
1647 1696 7.849804 ATTGTCGCTGATTTAGTACAAGATT 57.150 32.000 0.00 0.00 37.62 2.40
1648 1697 7.667043 TTGTCGCTGATTTAGTACAAGATTT 57.333 32.000 0.00 0.00 32.84 2.17
1649 1698 8.766000 TTGTCGCTGATTTAGTACAAGATTTA 57.234 30.769 0.00 0.00 32.84 1.40
1650 1699 8.407457 TGTCGCTGATTTAGTACAAGATTTAG 57.593 34.615 0.00 0.00 0.00 1.85
1651 1700 8.033038 TGTCGCTGATTTAGTACAAGATTTAGT 58.967 33.333 0.00 0.00 0.00 2.24
1652 1701 9.512435 GTCGCTGATTTAGTACAAGATTTAGTA 57.488 33.333 0.00 0.00 0.00 1.82
1653 1702 9.512435 TCGCTGATTTAGTACAAGATTTAGTAC 57.488 33.333 0.00 0.00 40.60 2.73
1654 1703 9.297586 CGCTGATTTAGTACAAGATTTAGTACA 57.702 33.333 0.00 0.00 42.26 2.90
1674 1723 5.734855 ACAACTTTTGTACTACAGCAGTG 57.265 39.130 0.00 0.00 43.27 3.66
1675 1724 4.035208 ACAACTTTTGTACTACAGCAGTGC 59.965 41.667 7.13 7.13 43.27 4.40
1676 1725 4.073293 ACTTTTGTACTACAGCAGTGCT 57.927 40.909 13.14 13.14 40.30 4.40
1677 1726 5.209818 ACTTTTGTACTACAGCAGTGCTA 57.790 39.130 19.26 1.68 40.30 3.49
1678 1727 5.794894 ACTTTTGTACTACAGCAGTGCTAT 58.205 37.500 19.26 9.83 40.30 2.97
1679 1728 6.931838 ACTTTTGTACTACAGCAGTGCTATA 58.068 36.000 19.26 10.63 40.30 1.31
1680 1729 6.812160 ACTTTTGTACTACAGCAGTGCTATAC 59.188 38.462 19.26 17.00 40.30 1.47
1681 1730 5.907866 TTGTACTACAGCAGTGCTATACA 57.092 39.130 19.26 19.18 40.30 2.29
1695 1744 5.195001 TGCTATACACACGATAGAATGCA 57.805 39.130 0.00 0.00 41.38 3.96
1696 1745 4.982295 TGCTATACACACGATAGAATGCAC 59.018 41.667 0.00 0.00 41.38 4.57
1697 1746 4.982295 GCTATACACACGATAGAATGCACA 59.018 41.667 0.00 0.00 41.38 4.57
1698 1747 5.107837 GCTATACACACGATAGAATGCACAC 60.108 44.000 0.00 0.00 41.38 3.82
1699 1748 1.992667 ACACACGATAGAATGCACACG 59.007 47.619 0.00 0.00 41.38 4.49
1700 1749 2.258755 CACACGATAGAATGCACACGA 58.741 47.619 0.00 0.00 41.38 4.35
1701 1750 2.860136 CACACGATAGAATGCACACGAT 59.140 45.455 0.00 0.00 41.38 3.73
1702 1751 4.041723 CACACGATAGAATGCACACGATA 58.958 43.478 0.00 0.00 41.38 2.92
1703 1752 4.042398 ACACGATAGAATGCACACGATAC 58.958 43.478 0.00 0.00 41.38 2.24
1704 1753 4.041723 CACGATAGAATGCACACGATACA 58.958 43.478 0.00 0.00 41.38 2.29
1705 1754 4.681483 CACGATAGAATGCACACGATACAT 59.319 41.667 0.00 0.00 41.38 2.29
1706 1755 5.856455 CACGATAGAATGCACACGATACATA 59.144 40.000 0.00 0.00 41.38 2.29
1707 1756 6.032880 CACGATAGAATGCACACGATACATAG 59.967 42.308 0.00 0.00 41.38 2.23
1708 1757 6.072673 ACGATAGAATGCACACGATACATAGA 60.073 38.462 0.00 0.00 41.38 1.98
1709 1758 6.969473 CGATAGAATGCACACGATACATAGAT 59.031 38.462 0.00 0.00 39.76 1.98
1710 1759 7.044445 CGATAGAATGCACACGATACATAGATG 60.044 40.741 0.00 0.00 39.76 2.90
1711 1760 6.089249 AGAATGCACACGATACATAGATGA 57.911 37.500 0.00 0.00 0.00 2.92
1712 1761 6.695429 AGAATGCACACGATACATAGATGAT 58.305 36.000 0.00 0.00 0.00 2.45
1713 1762 7.830739 AGAATGCACACGATACATAGATGATA 58.169 34.615 0.00 0.00 0.00 2.15
1714 1763 7.757173 AGAATGCACACGATACATAGATGATAC 59.243 37.037 0.00 0.00 0.00 2.24
1715 1764 6.575162 TGCACACGATACATAGATGATACT 57.425 37.500 0.00 0.00 0.00 2.12
1716 1765 6.981722 TGCACACGATACATAGATGATACTT 58.018 36.000 0.00 0.00 0.00 2.24
1717 1766 8.106247 TGCACACGATACATAGATGATACTTA 57.894 34.615 0.00 0.00 0.00 2.24
1718 1767 8.573035 TGCACACGATACATAGATGATACTTAA 58.427 33.333 0.00 0.00 0.00 1.85
1719 1768 9.406828 GCACACGATACATAGATGATACTTAAA 57.593 33.333 0.00 0.00 0.00 1.52
1727 1776 7.099764 ACATAGATGATACTTAAATCCAGCCG 58.900 38.462 0.00 0.00 0.00 5.52
1728 1777 4.899502 AGATGATACTTAAATCCAGCCGG 58.100 43.478 0.00 0.00 0.00 6.13
1730 1779 4.067972 TGATACTTAAATCCAGCCGGAC 57.932 45.455 5.05 0.00 46.79 4.79
1731 1780 3.452990 TGATACTTAAATCCAGCCGGACA 59.547 43.478 5.05 0.00 46.79 4.02
1732 1781 4.102524 TGATACTTAAATCCAGCCGGACAT 59.897 41.667 5.05 0.00 46.79 3.06
1733 1782 2.643551 ACTTAAATCCAGCCGGACATG 58.356 47.619 5.05 0.00 46.79 3.21
1734 1783 1.334869 CTTAAATCCAGCCGGACATGC 59.665 52.381 5.05 0.00 46.79 4.06
1735 1784 0.254462 TAAATCCAGCCGGACATGCA 59.746 50.000 5.05 0.00 46.79 3.96
1736 1785 1.315257 AAATCCAGCCGGACATGCAC 61.315 55.000 5.05 0.00 46.79 4.57
1737 1786 2.482796 AATCCAGCCGGACATGCACA 62.483 55.000 5.05 0.00 46.79 4.57
1738 1787 2.274948 ATCCAGCCGGACATGCACAT 62.275 55.000 5.05 0.00 46.79 3.21
1739 1788 2.767445 CCAGCCGGACATGCACATG 61.767 63.158 5.05 9.06 44.15 3.21
1740 1789 1.746239 CAGCCGGACATGCACATGA 60.746 57.895 17.19 0.00 41.20 3.07
1741 1790 1.099295 CAGCCGGACATGCACATGAT 61.099 55.000 17.19 1.91 41.20 2.45
1742 1791 0.394762 AGCCGGACATGCACATGATT 60.395 50.000 17.19 0.00 41.20 2.57
1743 1792 0.248743 GCCGGACATGCACATGATTG 60.249 55.000 17.19 5.85 41.20 2.67
1744 1793 1.381522 CCGGACATGCACATGATTGA 58.618 50.000 17.19 0.00 41.20 2.57
1745 1794 1.064505 CCGGACATGCACATGATTGAC 59.935 52.381 17.19 3.61 41.20 3.18
1746 1795 1.738908 CGGACATGCACATGATTGACA 59.261 47.619 17.19 0.00 41.20 3.58
1747 1796 2.162008 CGGACATGCACATGATTGACAA 59.838 45.455 17.19 0.00 41.20 3.18
1748 1797 3.729762 CGGACATGCACATGATTGACAAG 60.730 47.826 17.19 0.00 41.20 3.16
1749 1798 3.428452 GGACATGCACATGATTGACAAGG 60.428 47.826 17.19 0.00 41.20 3.61
1750 1799 2.494471 ACATGCACATGATTGACAAGGG 59.506 45.455 17.19 0.00 41.20 3.95
1751 1800 0.889994 TGCACATGATTGACAAGGGC 59.110 50.000 0.00 0.00 45.38 5.19
1752 1801 0.889994 GCACATGATTGACAAGGGCA 59.110 50.000 0.00 0.00 44.66 5.36
1753 1802 1.403249 GCACATGATTGACAAGGGCAC 60.403 52.381 0.00 0.00 44.66 5.01
1787 1836 3.235944 CACGTCGTGCATAGATCGT 57.764 52.632 13.22 12.82 0.00 3.73
1788 1837 0.840103 CACGTCGTGCATAGATCGTG 59.160 55.000 13.22 21.84 41.40 4.35
1789 1838 0.866061 ACGTCGTGCATAGATCGTGC 60.866 55.000 16.28 16.28 42.81 5.34
1794 1843 2.681660 TGCATAGATCGTGCAGCAC 58.318 52.632 20.31 16.21 46.76 4.40
1803 1852 4.000557 GTGCAGCACGGTCGTGTG 62.001 66.667 21.94 18.54 46.90 3.82
1806 1855 4.602259 CAGCACGGTCGTGTGGGT 62.602 66.667 21.94 2.25 46.90 4.51
1807 1856 2.913578 AGCACGGTCGTGTGGGTA 60.914 61.111 21.94 0.00 46.90 3.69
1808 1857 2.431942 GCACGGTCGTGTGGGTAG 60.432 66.667 21.94 0.00 46.90 3.18
1809 1858 2.431942 CACGGTCGTGTGGGTAGC 60.432 66.667 14.51 0.00 40.91 3.58
1810 1859 2.913578 ACGGTCGTGTGGGTAGCA 60.914 61.111 0.00 0.00 0.00 3.49
1811 1860 2.126071 CGGTCGTGTGGGTAGCAG 60.126 66.667 0.00 0.00 0.00 4.24
1812 1861 2.927580 CGGTCGTGTGGGTAGCAGT 61.928 63.158 0.00 0.00 0.00 4.40
1813 1862 1.370064 GGTCGTGTGGGTAGCAGTT 59.630 57.895 0.00 0.00 0.00 3.16
1814 1863 0.250166 GGTCGTGTGGGTAGCAGTTT 60.250 55.000 0.00 0.00 0.00 2.66
1815 1864 1.145803 GTCGTGTGGGTAGCAGTTTC 58.854 55.000 0.00 0.00 0.00 2.78
1816 1865 0.319211 TCGTGTGGGTAGCAGTTTCG 60.319 55.000 0.00 0.00 0.00 3.46
1817 1866 0.599204 CGTGTGGGTAGCAGTTTCGT 60.599 55.000 0.00 0.00 0.00 3.85
1818 1867 1.589803 GTGTGGGTAGCAGTTTCGTT 58.410 50.000 0.00 0.00 0.00 3.85
1819 1868 1.944709 GTGTGGGTAGCAGTTTCGTTT 59.055 47.619 0.00 0.00 0.00 3.60
1820 1869 1.944024 TGTGGGTAGCAGTTTCGTTTG 59.056 47.619 0.00 0.00 0.00 2.93
1899 1948 2.171237 TGATCTACCTTGATGGGCAGTG 59.829 50.000 0.00 0.00 41.11 3.66
1905 1954 0.968901 CTTGATGGGCAGTGCATGGT 60.969 55.000 18.61 0.00 0.00 3.55
2069 2124 7.303261 TCGTACCATGACTTATCGTTGATATC 58.697 38.462 0.00 0.00 0.00 1.63
2084 2139 5.331905 CGTTGATATCGTTGCTAGCTTCTTC 60.332 44.000 17.23 4.69 0.00 2.87
2163 2223 0.250901 AGACCAGTGGCTGCGATTTT 60.251 50.000 9.78 0.00 0.00 1.82
2167 2227 0.883833 CAGTGGCTGCGATTTTTCCT 59.116 50.000 0.00 0.00 0.00 3.36
2184 2244 8.670521 ATTTTTCCTTCCTCCAATAAGTCATT 57.329 30.769 0.00 0.00 0.00 2.57
2305 2365 6.225318 CCTTCTTCATGAGATCATCTTCTCC 58.775 44.000 0.00 0.00 41.24 3.71
2342 2402 0.885150 GCTCCTTAGCCGGGTAATGC 60.885 60.000 25.35 23.05 43.40 3.56
2343 2403 0.250338 CTCCTTAGCCGGGTAATGCC 60.250 60.000 25.35 0.00 0.00 4.40
2344 2404 0.983905 TCCTTAGCCGGGTAATGCCA 60.984 55.000 25.35 6.30 39.65 4.92
2345 2405 0.106918 CCTTAGCCGGGTAATGCCAA 60.107 55.000 25.35 5.32 39.65 4.52
2346 2406 1.478654 CCTTAGCCGGGTAATGCCAAT 60.479 52.381 25.35 0.00 39.65 3.16
2347 2407 1.608590 CTTAGCCGGGTAATGCCAATG 59.391 52.381 25.35 9.14 39.65 2.82
2348 2408 0.548989 TAGCCGGGTAATGCCAATGT 59.451 50.000 11.80 0.00 39.65 2.71
2349 2409 0.324275 AGCCGGGTAATGCCAATGTT 60.324 50.000 3.10 0.00 39.65 2.71
2350 2410 0.534873 GCCGGGTAATGCCAATGTTT 59.465 50.000 2.18 0.00 39.65 2.83
2351 2411 1.066502 GCCGGGTAATGCCAATGTTTT 60.067 47.619 2.18 0.00 39.65 2.43
2352 2412 2.887337 CCGGGTAATGCCAATGTTTTC 58.113 47.619 0.00 0.00 39.65 2.29
2353 2413 2.495669 CCGGGTAATGCCAATGTTTTCT 59.504 45.455 0.00 0.00 39.65 2.52
2354 2414 3.697045 CCGGGTAATGCCAATGTTTTCTA 59.303 43.478 0.00 0.00 39.65 2.10
2355 2415 4.158764 CCGGGTAATGCCAATGTTTTCTAA 59.841 41.667 0.00 0.00 39.65 2.10
2356 2416 5.336849 CCGGGTAATGCCAATGTTTTCTAAA 60.337 40.000 0.00 0.00 39.65 1.85
2357 2417 6.159988 CGGGTAATGCCAATGTTTTCTAAAA 58.840 36.000 0.00 0.00 39.65 1.52
2358 2418 6.647067 CGGGTAATGCCAATGTTTTCTAAAAA 59.353 34.615 0.00 0.00 39.65 1.94
2359 2419 7.148656 CGGGTAATGCCAATGTTTTCTAAAAAG 60.149 37.037 0.00 0.00 39.65 2.27
2360 2420 7.875554 GGGTAATGCCAATGTTTTCTAAAAAGA 59.124 33.333 0.00 0.00 39.65 2.52
2361 2421 9.267084 GGTAATGCCAATGTTTTCTAAAAAGAA 57.733 29.630 0.00 0.00 37.17 2.52
2378 2438 1.786441 AGAAAAACATGACCAGGGGGA 59.214 47.619 0.00 0.00 38.05 4.81
2382 2442 1.084018 AACATGACCAGGGGGACAAT 58.916 50.000 0.00 0.00 42.05 2.71
2436 2496 8.692110 TTCATATAGCTTGCTTTTCACATTTG 57.308 30.769 0.00 0.00 0.00 2.32
2442 2502 4.508861 GCTTGCTTTTCACATTTGACATGT 59.491 37.500 0.00 0.00 0.00 3.21
2583 2643 2.554032 GTTGTTGATGGGTGGAAGACAG 59.446 50.000 0.00 0.00 0.00 3.51
2677 2737 8.130469 TGTTGTGCATAGCATTTCACTATAATG 58.870 33.333 0.00 0.00 41.91 1.90
2768 2828 6.128063 ACGTTTCTAAGACGCTATGAACTACT 60.128 38.462 0.00 0.00 43.92 2.57
2770 2830 6.374565 TTCTAAGACGCTATGAACTACTCC 57.625 41.667 0.00 0.00 0.00 3.85
2771 2831 4.820716 TCTAAGACGCTATGAACTACTCCC 59.179 45.833 0.00 0.00 0.00 4.30
2791 2851 3.824443 CCCTCCGTTCCAAAATAAGTGTT 59.176 43.478 0.00 0.00 0.00 3.32
2829 2913 8.091449 TCAAAATTGAACTAAAACCACAACACT 58.909 29.630 0.00 0.00 33.55 3.55
2837 2921 9.575783 GAACTAAAACCACAACACTTATTTTGA 57.424 29.630 0.00 0.00 0.00 2.69
2843 2927 5.105675 ACCACAACACTTATTTTGAAACGGT 60.106 36.000 0.00 0.00 0.00 4.83
2917 3001 1.196766 ACATGCAGGAGACAGAGGCA 61.197 55.000 4.84 0.00 39.03 4.75
2983 3067 5.575157 TGATGCCCTTTTCCATGTAACTTA 58.425 37.500 0.00 0.00 0.00 2.24
3014 3098 6.414408 GCAGTATTATGTGATATCTGCACC 57.586 41.667 3.98 0.00 43.83 5.01
3076 3160 6.419791 TCGAGTTAAATTGTCCCCATGTAAT 58.580 36.000 0.00 0.00 0.00 1.89
3187 3271 2.093447 ACTGGAACATACTAGCAGTGGC 60.093 50.000 0.00 0.00 38.20 5.01
3243 3327 3.393089 AAGAACTGCTCGACACTTGAT 57.607 42.857 0.00 0.00 0.00 2.57
3274 3358 5.183969 GTCCACCTTAGGGTTCATTTACTC 58.816 45.833 2.32 0.00 44.73 2.59
3393 3477 2.622942 ACGTTGGCATTTCACTCACATT 59.377 40.909 0.00 0.00 0.00 2.71
3510 3757 6.352222 GGGTCTAACAGATCTCATTCCTTTCA 60.352 42.308 0.00 0.00 0.00 2.69
4120 4384 6.905076 CCGCACAAAACTATAATCATGTGTAC 59.095 38.462 5.71 0.00 40.10 2.90
4235 4538 3.678072 GGGCAGGAAAAATAAACGCTTTC 59.322 43.478 0.00 0.00 0.00 2.62
4249 4552 5.705609 AACGCTTTCCTATTGTGTTTGAT 57.294 34.783 0.00 0.00 31.47 2.57
4255 4558 6.144402 GCTTTCCTATTGTGTTTGATTGTGTG 59.856 38.462 0.00 0.00 0.00 3.82
4285 4588 3.868077 GTGTCTCTCGAATCCATTTCTGG 59.132 47.826 0.00 0.00 44.64 3.86
4296 4599 6.256757 CGAATCCATTTCTGGTAGTTTCTCTC 59.743 42.308 0.00 0.00 43.61 3.20
4534 4838 1.134530 CGGCTTCGAGCAGTTACGAG 61.135 60.000 8.71 0.00 44.75 4.18
4735 5077 4.490743 ACTTTTTGGTGCCGTTATAATGC 58.509 39.130 0.00 1.48 0.00 3.56
4742 5084 4.944930 TGGTGCCGTTATAATGCTTACTTT 59.055 37.500 10.23 0.00 0.00 2.66
4873 5215 7.830099 AACTCCAGAAATGAACTGAAATCTT 57.170 32.000 0.00 0.00 37.54 2.40
4894 5258 0.623723 GACCCCATCCTGCCTAACAA 59.376 55.000 0.00 0.00 0.00 2.83
5110 5504 6.036517 GTGATGTCTTTTCACCTAGTATGCTG 59.963 42.308 0.00 0.00 38.00 4.41
5121 5515 5.352569 CACCTAGTATGCTGACCTTTTTCTG 59.647 44.000 0.00 0.00 0.00 3.02
5722 6117 8.854979 TTTCAATTATCTTGTGTCACAAACTG 57.145 30.769 18.68 8.27 37.69 3.16
5751 6146 8.726870 TTTTGTGTCCCTAAGCATATAAGTAC 57.273 34.615 0.00 0.00 0.00 2.73
5757 6152 7.512746 TGTCCCTAAGCATATAAGTACTGGATT 59.487 37.037 0.00 0.00 0.00 3.01
5810 6205 8.279970 TGATAAATATTTCCTCAACTGGTGTG 57.720 34.615 3.39 0.00 0.00 3.82
5833 6228 2.168521 GCTCACCTGCCTAGTCATTACA 59.831 50.000 0.00 0.00 0.00 2.41
5840 6235 8.148351 TCACCTGCCTAGTCATTACATATTAAC 58.852 37.037 0.00 0.00 0.00 2.01
6083 6484 4.714632 TCTTCTGTACCAAAACTCCCAAG 58.285 43.478 0.00 0.00 0.00 3.61
6110 6511 6.734104 TCTTTTGCTTGCTCTTTATCTCTC 57.266 37.500 0.00 0.00 0.00 3.20
6132 6533 4.778534 ATGTTTCTCATGGCAAGTTCAG 57.221 40.909 0.00 0.00 35.19 3.02
6140 6541 0.467290 TGGCAAGTTCAGGGGACAAC 60.467 55.000 0.00 0.00 0.00 3.32
6179 6580 1.250328 CATGCCTCACTTTGCCTTGA 58.750 50.000 0.00 0.00 0.00 3.02
6197 6598 6.664816 TGCCTTGATTTCTAATTTCTCATGGT 59.335 34.615 0.00 0.00 35.00 3.55
6340 6741 9.945633 ATATGGGTGGGTTACAAATTAATAAGT 57.054 29.630 0.00 0.00 0.00 2.24
6389 6790 1.154205 GGAGTGATGAATCGGCCACG 61.154 60.000 2.24 0.00 42.74 4.94
6403 6804 1.669265 GGCCACGGCTAAATGTAAGAC 59.331 52.381 8.20 0.00 41.60 3.01
6855 7256 7.170998 ACATCCGAGTTGTTTAAACTTCTGTAG 59.829 37.037 18.72 9.93 0.00 2.74
7041 7442 7.314393 ACAGACTCTTATCGTTTCTTCTTACC 58.686 38.462 0.00 0.00 0.00 2.85
7316 7717 0.930742 GCCATCGACGTTCTAGAGCG 60.931 60.000 25.03 25.03 40.90 5.03
7334 7735 4.618489 AGAGCGAAAATGCAAAAGAAATCG 59.382 37.500 0.00 0.00 37.31 3.34
7425 7836 1.003718 GGGGTCAACCACCTCTTCG 60.004 63.158 0.89 0.00 43.54 3.79
7558 7970 0.693622 TCCCCTTTACGGCATGTTCA 59.306 50.000 0.00 0.00 0.00 3.18
7675 8087 1.216064 TCCATCCTTGCACCATAGCT 58.784 50.000 0.00 0.00 34.99 3.32
7922 8347 4.637387 TGCAACATTTTTGGGATGGAAT 57.363 36.364 0.00 0.00 0.00 3.01
7933 8358 4.734398 TGGGATGGAATTATTTGTGTGC 57.266 40.909 0.00 0.00 0.00 4.57
7940 8365 5.809001 TGGAATTATTTGTGTGCTCTCTCT 58.191 37.500 0.00 0.00 0.00 3.10
7941 8366 5.877012 TGGAATTATTTGTGTGCTCTCTCTC 59.123 40.000 0.00 0.00 0.00 3.20
7944 8369 0.389025 TTTGTGTGCTCTCTCTCGCA 59.611 50.000 0.00 0.00 0.00 5.10
7978 8403 1.798813 GGTACGAACAACAGCCTTCTG 59.201 52.381 0.00 0.00 45.71 3.02
7979 8404 1.798813 GTACGAACAACAGCCTTCTGG 59.201 52.381 0.00 0.00 44.54 3.86
8004 8511 4.216902 CACTCATTGACAAAATCTGGCAGA 59.783 41.667 21.19 21.19 46.46 4.26
8011 8518 7.994425 TTGACAAAATCTGGCAGAGTATAAA 57.006 32.000 23.24 6.43 46.46 1.40
8012 8519 8.579850 TTGACAAAATCTGGCAGAGTATAAAT 57.420 30.769 23.24 1.45 46.46 1.40
8013 8520 9.679661 TTGACAAAATCTGGCAGAGTATAAATA 57.320 29.630 23.24 3.74 46.46 1.40
8021 8528 7.445121 TCTGGCAGAGTATAAATAGTCCAATG 58.555 38.462 14.43 0.00 34.05 2.82
8033 8540 1.691219 TCCAATGGCTGGGACTTCC 59.309 57.895 0.00 0.00 46.44 3.46
8034 8541 1.139498 TCCAATGGCTGGGACTTCCA 61.139 55.000 0.00 0.00 46.44 3.53
8035 8542 0.032813 CCAATGGCTGGGACTTCCAT 60.033 55.000 0.00 0.00 46.01 3.41
8036 8543 1.396653 CAATGGCTGGGACTTCCATC 58.603 55.000 0.00 0.00 46.01 3.51
8038 8545 0.549950 ATGGCTGGGACTTCCATCTG 59.450 55.000 0.00 0.00 46.01 2.90
8039 8546 1.225704 GGCTGGGACTTCCATCTGG 59.774 63.158 0.00 0.00 46.01 3.86
8040 8547 1.566298 GGCTGGGACTTCCATCTGGT 61.566 60.000 0.00 0.00 46.01 4.00
8041 8548 0.329596 GCTGGGACTTCCATCTGGTT 59.670 55.000 0.00 0.00 46.01 3.67
8042 8549 1.680249 GCTGGGACTTCCATCTGGTTC 60.680 57.143 0.00 0.00 46.01 3.62
8043 8550 0.991920 TGGGACTTCCATCTGGTTCC 59.008 55.000 0.00 1.64 41.46 3.62
8044 8551 0.107654 GGGACTTCCATCTGGTTCCG 60.108 60.000 0.00 0.00 37.91 4.30
8046 8553 0.036388 GACTTCCATCTGGTTCCGCA 60.036 55.000 0.00 0.00 36.34 5.69
8048 8555 0.036010 CTTCCATCTGGTTCCGCAGT 60.036 55.000 0.00 0.00 36.34 4.40
8049 8556 0.400213 TTCCATCTGGTTCCGCAGTT 59.600 50.000 0.00 0.00 36.34 3.16
8051 8558 1.026718 CCATCTGGTTCCGCAGTTCC 61.027 60.000 0.00 0.00 0.00 3.62
8052 8559 0.321564 CATCTGGTTCCGCAGTTCCA 60.322 55.000 0.00 0.00 0.00 3.53
8053 8560 0.321653 ATCTGGTTCCGCAGTTCCAC 60.322 55.000 0.00 0.00 0.00 4.02
8054 8561 2.280524 TGGTTCCGCAGTTCCACG 60.281 61.111 0.00 0.00 0.00 4.94
8055 8562 2.280592 GGTTCCGCAGTTCCACGT 60.281 61.111 0.00 0.00 0.00 4.49
8056 8563 1.005867 GGTTCCGCAGTTCCACGTA 60.006 57.895 0.00 0.00 0.00 3.57
8057 8564 0.390735 GGTTCCGCAGTTCCACGTAT 60.391 55.000 0.00 0.00 0.00 3.06
8059 8566 1.802365 GTTCCGCAGTTCCACGTATTT 59.198 47.619 0.00 0.00 0.00 1.40
8060 8567 1.434555 TCCGCAGTTCCACGTATTTG 58.565 50.000 0.00 0.00 0.00 2.32
8061 8568 1.153353 CCGCAGTTCCACGTATTTGT 58.847 50.000 0.00 0.00 0.00 2.83
8062 8569 1.533731 CCGCAGTTCCACGTATTTGTT 59.466 47.619 0.00 0.00 0.00 2.83
8066 8573 5.235616 CCGCAGTTCCACGTATTTGTTATAT 59.764 40.000 0.00 0.00 0.00 0.86
8067 8574 6.352526 CGCAGTTCCACGTATTTGTTATATC 58.647 40.000 0.00 0.00 0.00 1.63
8068 8575 6.200286 CGCAGTTCCACGTATTTGTTATATCT 59.800 38.462 0.00 0.00 0.00 1.98
8070 8577 7.850982 GCAGTTCCACGTATTTGTTATATCTTG 59.149 37.037 0.00 0.00 0.00 3.02
8071 8578 8.335356 CAGTTCCACGTATTTGTTATATCTTGG 58.665 37.037 0.00 0.00 0.00 3.61
8072 8579 6.854496 TCCACGTATTTGTTATATCTTGGC 57.146 37.500 0.00 0.00 0.00 4.52
8074 8581 5.464057 CCACGTATTTGTTATATCTTGGCGA 59.536 40.000 0.00 0.00 0.00 5.54
8075 8582 6.018588 CCACGTATTTGTTATATCTTGGCGAA 60.019 38.462 0.00 0.00 0.00 4.70
8076 8583 6.844279 CACGTATTTGTTATATCTTGGCGAAC 59.156 38.462 0.00 0.00 0.00 3.95
8129 8638 0.743701 GAGCGGAGGACTGTAGTCGA 60.744 60.000 5.99 0.00 45.65 4.20
8254 8763 6.963117 TTTTCTTTAGATTAGAGGGGGTGA 57.037 37.500 0.00 0.00 0.00 4.02
8255 8764 6.963117 TTTCTTTAGATTAGAGGGGGTGAA 57.037 37.500 0.00 0.00 0.00 3.18
8256 8765 5.952347 TCTTTAGATTAGAGGGGGTGAAC 57.048 43.478 0.00 0.00 0.00 3.18
8257 8766 4.404715 TCTTTAGATTAGAGGGGGTGAACG 59.595 45.833 0.00 0.00 0.00 3.95
8258 8767 2.544844 AGATTAGAGGGGGTGAACGA 57.455 50.000 0.00 0.00 0.00 3.85
8259 8768 2.829023 AGATTAGAGGGGGTGAACGAA 58.171 47.619 0.00 0.00 0.00 3.85
8260 8769 3.385115 AGATTAGAGGGGGTGAACGAAT 58.615 45.455 0.00 0.00 0.00 3.34
8261 8770 3.780850 AGATTAGAGGGGGTGAACGAATT 59.219 43.478 0.00 0.00 0.00 2.17
8262 8771 3.343941 TTAGAGGGGGTGAACGAATTG 57.656 47.619 0.00 0.00 0.00 2.32
8263 8772 1.064825 AGAGGGGGTGAACGAATTGT 58.935 50.000 0.00 0.00 0.00 2.71
8264 8773 1.423921 AGAGGGGGTGAACGAATTGTT 59.576 47.619 0.00 0.00 45.61 2.83
8265 8774 2.158519 AGAGGGGGTGAACGAATTGTTT 60.159 45.455 0.00 0.00 42.09 2.83
8266 8775 1.960689 AGGGGGTGAACGAATTGTTTG 59.039 47.619 0.00 0.00 42.09 2.93
8267 8776 1.000394 GGGGGTGAACGAATTGTTTGG 60.000 52.381 0.00 0.00 42.09 3.28
8268 8777 1.000394 GGGGTGAACGAATTGTTTGGG 60.000 52.381 0.00 0.00 42.09 4.12
8269 8778 1.684450 GGGTGAACGAATTGTTTGGGT 59.316 47.619 0.00 0.00 42.09 4.51
8270 8779 2.101750 GGGTGAACGAATTGTTTGGGTT 59.898 45.455 0.00 0.00 42.09 4.11
8271 8780 3.431068 GGGTGAACGAATTGTTTGGGTTT 60.431 43.478 0.00 0.00 42.09 3.27
8272 8781 3.553917 GGTGAACGAATTGTTTGGGTTTG 59.446 43.478 0.00 0.00 42.09 2.93
8273 8782 4.177783 GTGAACGAATTGTTTGGGTTTGT 58.822 39.130 0.00 0.00 42.09 2.83
8274 8783 5.341617 GTGAACGAATTGTTTGGGTTTGTA 58.658 37.500 0.00 0.00 42.09 2.41
8275 8784 5.805994 GTGAACGAATTGTTTGGGTTTGTAA 59.194 36.000 0.00 0.00 42.09 2.41
8276 8785 6.310711 GTGAACGAATTGTTTGGGTTTGTAAA 59.689 34.615 0.00 0.00 42.09 2.01
8277 8786 6.872020 TGAACGAATTGTTTGGGTTTGTAAAA 59.128 30.769 0.00 0.00 42.09 1.52
8278 8787 7.549488 TGAACGAATTGTTTGGGTTTGTAAAAT 59.451 29.630 0.00 0.00 42.09 1.82
8279 8788 7.240414 ACGAATTGTTTGGGTTTGTAAAATG 57.760 32.000 0.00 0.00 0.00 2.32
8280 8789 6.819146 ACGAATTGTTTGGGTTTGTAAAATGT 59.181 30.769 0.00 0.00 0.00 2.71
8281 8790 7.334671 ACGAATTGTTTGGGTTTGTAAAATGTT 59.665 29.630 0.00 0.00 0.00 2.71
8282 8791 8.818057 CGAATTGTTTGGGTTTGTAAAATGTTA 58.182 29.630 0.00 0.00 0.00 2.41
8285 8794 8.842358 TTGTTTGGGTTTGTAAAATGTTAACA 57.158 26.923 11.41 11.41 0.00 2.41
8286 8795 8.842358 TGTTTGGGTTTGTAAAATGTTAACAA 57.158 26.923 13.23 0.00 0.00 2.83
8287 8796 9.280174 TGTTTGGGTTTGTAAAATGTTAACAAA 57.720 25.926 13.23 0.00 0.00 2.83
8292 8801 9.227490 GGGTTTGTAAAATGTTAACAAAATTGC 57.773 29.630 13.23 11.44 33.01 3.56
8293 8802 8.938928 GGTTTGTAAAATGTTAACAAAATTGCG 58.061 29.630 13.23 0.00 33.01 4.85
8294 8803 8.457562 GTTTGTAAAATGTTAACAAAATTGCGC 58.542 29.630 13.23 0.00 33.01 6.09
8295 8804 6.347881 TGTAAAATGTTAACAAAATTGCGCG 58.652 32.000 13.23 0.00 0.00 6.86
8296 8805 5.643339 AAAATGTTAACAAAATTGCGCGA 57.357 30.435 12.10 0.00 0.00 5.87
8297 8806 4.623122 AATGTTAACAAAATTGCGCGAC 57.377 36.364 12.10 0.88 0.00 5.19
8298 8807 3.066369 TGTTAACAAAATTGCGCGACA 57.934 38.095 12.10 4.31 0.00 4.35
8299 8808 2.784380 TGTTAACAAAATTGCGCGACAC 59.216 40.909 12.10 0.00 0.00 3.67
8300 8809 2.757686 TAACAAAATTGCGCGACACA 57.242 40.000 12.10 0.00 0.00 3.72
8301 8810 1.914634 AACAAAATTGCGCGACACAA 58.085 40.000 12.10 4.93 0.00 3.33
8302 8811 1.914634 ACAAAATTGCGCGACACAAA 58.085 40.000 12.10 0.00 0.00 2.83
8303 8812 2.468831 ACAAAATTGCGCGACACAAAT 58.531 38.095 12.10 0.00 0.00 2.32
8304 8813 2.470999 ACAAAATTGCGCGACACAAATC 59.529 40.909 12.10 0.00 0.00 2.17
8305 8814 2.414058 AAATTGCGCGACACAAATCA 57.586 40.000 12.10 0.00 0.00 2.57
8306 8815 1.967762 AATTGCGCGACACAAATCAG 58.032 45.000 12.10 0.00 0.00 2.90
8307 8816 1.155889 ATTGCGCGACACAAATCAGA 58.844 45.000 12.10 0.00 0.00 3.27
8308 8817 0.234625 TTGCGCGACACAAATCAGAC 59.765 50.000 12.10 0.00 0.00 3.51
8309 8818 1.132640 GCGCGACACAAATCAGACC 59.867 57.895 12.10 0.00 0.00 3.85
8310 8819 1.787847 CGCGACACAAATCAGACCC 59.212 57.895 0.00 0.00 0.00 4.46
8311 8820 1.787847 GCGACACAAATCAGACCCG 59.212 57.895 0.00 0.00 0.00 5.28
8312 8821 0.669318 GCGACACAAATCAGACCCGA 60.669 55.000 0.00 0.00 0.00 5.14
8313 8822 2.007049 GCGACACAAATCAGACCCGAT 61.007 52.381 0.00 0.00 0.00 4.18
8314 8823 2.346803 CGACACAAATCAGACCCGATT 58.653 47.619 0.00 0.00 37.20 3.34
8315 8824 2.742053 CGACACAAATCAGACCCGATTT 59.258 45.455 0.00 0.00 44.52 2.17
8316 8825 3.181520 CGACACAAATCAGACCCGATTTC 60.182 47.826 0.00 0.00 42.36 2.17
8317 8826 3.081804 ACACAAATCAGACCCGATTTCC 58.918 45.455 0.00 0.00 42.36 3.13
8318 8827 3.081061 CACAAATCAGACCCGATTTCCA 58.919 45.455 0.00 0.00 42.36 3.53
8319 8828 3.127548 CACAAATCAGACCCGATTTCCAG 59.872 47.826 0.00 0.00 42.36 3.86
8320 8829 3.244911 ACAAATCAGACCCGATTTCCAGT 60.245 43.478 0.00 0.00 42.36 4.00
8321 8830 2.698855 ATCAGACCCGATTTCCAGTG 57.301 50.000 0.00 0.00 0.00 3.66
8322 8831 0.036388 TCAGACCCGATTTCCAGTGC 60.036 55.000 0.00 0.00 0.00 4.40
8323 8832 0.036010 CAGACCCGATTTCCAGTGCT 60.036 55.000 0.00 0.00 0.00 4.40
8324 8833 0.250513 AGACCCGATTTCCAGTGCTC 59.749 55.000 0.00 0.00 0.00 4.26
8325 8834 1.079127 ACCCGATTTCCAGTGCTCG 60.079 57.895 0.00 0.00 0.00 5.03
8326 8835 3.799753 CCGATTTCCAGTGCTCGG 58.200 61.111 7.10 7.10 43.98 4.63
8327 8836 4.910956 CGATTTCCAGTGCTCGGA 57.089 55.556 0.00 0.00 0.00 4.55
8328 8837 2.373938 CGATTTCCAGTGCTCGGAC 58.626 57.895 0.00 0.00 30.29 4.79
8329 8838 1.413767 CGATTTCCAGTGCTCGGACG 61.414 60.000 0.00 0.00 30.29 4.79
8330 8839 1.696832 GATTTCCAGTGCTCGGACGC 61.697 60.000 0.00 0.00 30.29 5.19
8331 8840 2.449031 ATTTCCAGTGCTCGGACGCA 62.449 55.000 0.00 0.00 37.62 5.24
8332 8841 2.449031 TTTCCAGTGCTCGGACGCAT 62.449 55.000 5.63 0.00 42.62 4.73
8333 8842 2.835701 TTCCAGTGCTCGGACGCATC 62.836 60.000 5.63 0.00 42.62 3.91
8334 8843 3.250323 CAGTGCTCGGACGCATCG 61.250 66.667 5.63 0.00 42.62 3.84
8335 8844 3.749064 AGTGCTCGGACGCATCGT 61.749 61.111 5.63 0.00 45.10 3.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 6.294787 GGCATCTATCGAGAGGACTATTTTGA 60.295 42.308 7.30 0.00 38.55 2.69
34 35 4.013728 GTGGCATCTATCGAGAGGACTAT 58.986 47.826 7.30 0.00 42.34 2.12
44 47 2.831333 AGCTGAAAGTGGCATCTATCG 58.169 47.619 0.00 0.00 35.30 2.92
63 66 4.682787 TGGTTGTCTTATGCATCGTCTAG 58.317 43.478 0.19 0.00 0.00 2.43
73 76 6.423604 GTCCCATTTTTGTTGGTTGTCTTATG 59.576 38.462 0.00 0.00 31.99 1.90
95 98 1.061566 GCACGCTGTTAAATACGGTCC 59.938 52.381 0.00 0.00 35.43 4.46
98 101 1.062002 CAGGCACGCTGTTAAATACGG 59.938 52.381 0.00 0.00 36.13 4.02
99 102 1.996898 TCAGGCACGCTGTTAAATACG 59.003 47.619 0.00 0.00 0.00 3.06
132 135 7.450074 TGATGGCTAGAAAAGAAAGTAACTGA 58.550 34.615 0.00 0.00 0.00 3.41
143 146 7.881751 TGGATATTGATCTGATGGCTAGAAAAG 59.118 37.037 0.00 0.00 32.15 2.27
150 153 4.321718 CGTTGGATATTGATCTGATGGCT 58.678 43.478 0.00 0.00 32.15 4.75
172 175 2.969238 CGCGGCATGATCCTGACC 60.969 66.667 0.00 2.33 0.00 4.02
187 190 1.153086 AGGAGGATGAACATGCCGC 60.153 57.895 2.88 1.87 0.00 6.53
273 276 0.468226 GCACGATGATGGGGAGGTAA 59.532 55.000 0.00 0.00 0.00 2.85
307 310 4.529731 GGGGCTTGGAGGGATGGC 62.530 72.222 0.00 0.00 0.00 4.40
352 355 3.712907 GGTAAGGGGGTGCAGCGA 61.713 66.667 10.24 0.00 0.00 4.93
357 360 0.622446 TCTTAGGGGTAAGGGGGTGC 60.622 60.000 0.00 0.00 0.00 5.01
368 371 4.846940 ACAAGCCCTTATCTATCTTAGGGG 59.153 45.833 8.04 0.00 46.17 4.79
370 373 5.280215 CCCACAAGCCCTTATCTATCTTAGG 60.280 48.000 0.00 0.00 0.00 2.69
371 374 5.308237 ACCCACAAGCCCTTATCTATCTTAG 59.692 44.000 0.00 0.00 0.00 2.18
372 375 5.224441 ACCCACAAGCCCTTATCTATCTTA 58.776 41.667 0.00 0.00 0.00 2.10
373 376 4.047883 ACCCACAAGCCCTTATCTATCTT 58.952 43.478 0.00 0.00 0.00 2.40
374 377 3.669949 ACCCACAAGCCCTTATCTATCT 58.330 45.455 0.00 0.00 0.00 1.98
375 378 4.439253 AACCCACAAGCCCTTATCTATC 57.561 45.455 0.00 0.00 0.00 2.08
376 379 4.386424 GGAAACCCACAAGCCCTTATCTAT 60.386 45.833 0.00 0.00 0.00 1.98
377 380 3.053917 GGAAACCCACAAGCCCTTATCTA 60.054 47.826 0.00 0.00 0.00 1.98
378 381 2.291605 GGAAACCCACAAGCCCTTATCT 60.292 50.000 0.00 0.00 0.00 1.98
379 382 2.100197 GGAAACCCACAAGCCCTTATC 58.900 52.381 0.00 0.00 0.00 1.75
380 383 2.231716 GGAAACCCACAAGCCCTTAT 57.768 50.000 0.00 0.00 0.00 1.73
381 384 3.757836 GGAAACCCACAAGCCCTTA 57.242 52.632 0.00 0.00 0.00 2.69
382 385 4.619233 GGAAACCCACAAGCCCTT 57.381 55.556 0.00 0.00 0.00 3.95
394 397 7.037945 AGCCTCATTATCTATCTTAGGGGAAAC 60.038 40.741 0.00 0.00 0.00 2.78
395 398 7.025620 AGCCTCATTATCTATCTTAGGGGAAA 58.974 38.462 0.00 0.00 0.00 3.13
396 399 6.575411 AGCCTCATTATCTATCTTAGGGGAA 58.425 40.000 0.00 0.00 0.00 3.97
397 400 6.172350 AGCCTCATTATCTATCTTAGGGGA 57.828 41.667 0.00 0.00 0.00 4.81
414 417 5.519808 TCTTAGGAAGAAGTCATAGCCTCA 58.480 41.667 0.00 0.00 33.83 3.86
424 427 5.659079 CCCACTGTCTATCTTAGGAAGAAGT 59.341 44.000 0.00 0.00 41.63 3.01
429 432 4.620086 TCCCCACTGTCTATCTTAGGAA 57.380 45.455 0.00 0.00 0.00 3.36
430 433 4.483950 CATCCCCACTGTCTATCTTAGGA 58.516 47.826 0.00 0.00 0.00 2.94
486 489 6.274157 TCTTTTCTAGTTCATCTCGAGCTT 57.726 37.500 7.81 0.00 36.46 3.74
493 496 8.214364 AGTCACCTTTTCTTTTCTAGTTCATCT 58.786 33.333 0.00 0.00 0.00 2.90
509 512 2.582052 TCATTTCGCCAGTCACCTTTT 58.418 42.857 0.00 0.00 0.00 2.27
510 513 2.270352 TCATTTCGCCAGTCACCTTT 57.730 45.000 0.00 0.00 0.00 3.11
511 514 2.270352 TTCATTTCGCCAGTCACCTT 57.730 45.000 0.00 0.00 0.00 3.50
512 515 2.270352 TTTCATTTCGCCAGTCACCT 57.730 45.000 0.00 0.00 0.00 4.00
513 516 3.575965 AATTTCATTTCGCCAGTCACC 57.424 42.857 0.00 0.00 0.00 4.02
728 754 3.619733 CGTCCCATTTCCATTGTCAGAGA 60.620 47.826 0.00 0.00 0.00 3.10
893 919 4.202663 TGAATTGGATTGGACTGGGAAGAA 60.203 41.667 0.00 0.00 0.00 2.52
894 920 3.333381 TGAATTGGATTGGACTGGGAAGA 59.667 43.478 0.00 0.00 0.00 2.87
936 962 2.498885 GGGGTATTTATAGACCGGCGAT 59.501 50.000 9.30 0.00 36.47 4.58
984 1010 0.905357 CCATCGGAACCAGGAACTCT 59.095 55.000 0.00 0.00 34.60 3.24
1028 1054 1.303643 CCCTCCTCCAACAACTGCC 60.304 63.158 0.00 0.00 0.00 4.85
1029 1055 1.973812 GCCCTCCTCCAACAACTGC 60.974 63.158 0.00 0.00 0.00 4.40
1030 1056 0.890996 GTGCCCTCCTCCAACAACTG 60.891 60.000 0.00 0.00 0.00 3.16
1031 1057 1.456287 GTGCCCTCCTCCAACAACT 59.544 57.895 0.00 0.00 0.00 3.16
1032 1058 1.966451 CGTGCCCTCCTCCAACAAC 60.966 63.158 0.00 0.00 0.00 3.32
1033 1059 2.429930 CGTGCCCTCCTCCAACAA 59.570 61.111 0.00 0.00 0.00 2.83
1034 1060 3.636231 CCGTGCCCTCCTCCAACA 61.636 66.667 0.00 0.00 0.00 3.33
1035 1061 4.410400 CCCGTGCCCTCCTCCAAC 62.410 72.222 0.00 0.00 0.00 3.77
1305 1340 3.109044 GGTACCTTTAGGAATCGAGCC 57.891 52.381 4.06 0.00 38.94 4.70
1347 1383 3.967332 AGTTTTGGGGATGAATTGCAG 57.033 42.857 0.00 0.00 0.00 4.41
1391 1427 4.995487 CCAGGGTTTTCGATAATAGGTAGC 59.005 45.833 0.00 0.00 0.00 3.58
1396 1432 5.865085 TCCATCCAGGGTTTTCGATAATAG 58.135 41.667 0.00 0.00 38.24 1.73
1462 1511 6.482973 ACCAGGTGTTTGCAAGAAATATTTTG 59.517 34.615 1.43 0.00 0.00 2.44
1482 1531 6.650120 AGAGTAAATAATACACCACACCAGG 58.350 40.000 0.00 0.00 0.00 4.45
1485 1534 9.880157 TTCTAAGAGTAAATAATACACCACACC 57.120 33.333 0.00 0.00 0.00 4.16
1512 1561 3.274288 GTCTAATCCAGCCAAACCTCAG 58.726 50.000 0.00 0.00 0.00 3.35
1517 1566 5.391312 AATTGTGTCTAATCCAGCCAAAC 57.609 39.130 0.00 0.00 0.00 2.93
1543 1592 9.535878 GGAGTAACAAATTGTCCATTTTACAAA 57.464 29.630 0.00 0.00 40.05 2.83
1552 1601 3.558321 CGGAGGGAGTAACAAATTGTCCA 60.558 47.826 0.00 0.00 0.00 4.02
1588 1637 7.554959 AGGAAGGAGTTACTAAATCAGTGAA 57.445 36.000 0.00 0.00 38.24 3.18
1608 1657 7.676004 TCAGCGACAATTAATATGGATAGGAA 58.324 34.615 0.00 0.00 0.00 3.36
1651 1700 5.235616 GCACTGCTGTAGTACAAAAGTTGTA 59.764 40.000 12.64 0.00 44.76 2.41
1652 1701 6.145556 AGCACTGCTGTAGTACAAAAGTTGT 61.146 40.000 1.67 0.00 41.92 3.32
1653 1702 4.273480 AGCACTGCTGTAGTACAAAAGTTG 59.727 41.667 1.67 10.27 37.57 3.16
1654 1703 4.451900 AGCACTGCTGTAGTACAAAAGTT 58.548 39.130 1.67 0.99 37.57 2.66
1655 1704 4.073293 AGCACTGCTGTAGTACAAAAGT 57.927 40.909 1.67 7.92 37.57 2.66
1656 1705 6.811665 TGTATAGCACTGCTGTAGTACAAAAG 59.188 38.462 14.15 7.30 40.10 2.27
1657 1706 6.588756 GTGTATAGCACTGCTGTAGTACAAAA 59.411 38.462 14.15 0.00 44.41 2.44
1658 1707 6.097356 GTGTATAGCACTGCTGTAGTACAAA 58.903 40.000 14.15 0.00 44.41 2.83
1659 1708 5.647589 GTGTATAGCACTGCTGTAGTACAA 58.352 41.667 14.15 0.00 44.41 2.41
1660 1709 5.244785 GTGTATAGCACTGCTGTAGTACA 57.755 43.478 14.15 13.12 44.41 2.90
1673 1722 4.982295 GTGCATTCTATCGTGTGTATAGCA 59.018 41.667 0.00 0.00 0.00 3.49
1674 1723 4.982295 TGTGCATTCTATCGTGTGTATAGC 59.018 41.667 0.00 0.00 0.00 2.97
1675 1724 5.115622 CGTGTGCATTCTATCGTGTGTATAG 59.884 44.000 0.00 0.00 0.00 1.31
1676 1725 4.973663 CGTGTGCATTCTATCGTGTGTATA 59.026 41.667 0.00 0.00 0.00 1.47
1677 1726 3.796717 CGTGTGCATTCTATCGTGTGTAT 59.203 43.478 0.00 0.00 0.00 2.29
1678 1727 3.119779 TCGTGTGCATTCTATCGTGTGTA 60.120 43.478 0.00 0.00 0.00 2.90
1679 1728 1.992667 CGTGTGCATTCTATCGTGTGT 59.007 47.619 0.00 0.00 0.00 3.72
1680 1729 2.258755 TCGTGTGCATTCTATCGTGTG 58.741 47.619 0.00 0.00 0.00 3.82
1681 1730 2.647529 TCGTGTGCATTCTATCGTGT 57.352 45.000 0.00 0.00 0.00 4.49
1682 1731 4.041723 TGTATCGTGTGCATTCTATCGTG 58.958 43.478 0.00 0.00 0.00 4.35
1683 1732 4.301637 TGTATCGTGTGCATTCTATCGT 57.698 40.909 0.00 0.00 0.00 3.73
1684 1733 6.314784 TCTATGTATCGTGTGCATTCTATCG 58.685 40.000 0.00 0.00 34.75 2.92
1685 1734 7.970614 TCATCTATGTATCGTGTGCATTCTATC 59.029 37.037 0.00 0.00 34.75 2.08
1686 1735 7.830739 TCATCTATGTATCGTGTGCATTCTAT 58.169 34.615 0.00 0.00 34.75 1.98
1687 1736 7.214467 TCATCTATGTATCGTGTGCATTCTA 57.786 36.000 0.00 0.00 34.75 2.10
1688 1737 6.089249 TCATCTATGTATCGTGTGCATTCT 57.911 37.500 0.00 0.00 34.75 2.40
1689 1738 6.957984 ATCATCTATGTATCGTGTGCATTC 57.042 37.500 0.00 0.00 34.75 2.67
1690 1739 7.606349 AGTATCATCTATGTATCGTGTGCATT 58.394 34.615 0.00 0.00 34.75 3.56
1691 1740 7.163001 AGTATCATCTATGTATCGTGTGCAT 57.837 36.000 0.00 0.91 36.99 3.96
1692 1741 6.575162 AGTATCATCTATGTATCGTGTGCA 57.425 37.500 0.00 0.00 0.00 4.57
1693 1742 8.965986 TTAAGTATCATCTATGTATCGTGTGC 57.034 34.615 0.00 0.00 0.00 4.57
1701 1750 8.251026 CGGCTGGATTTAAGTATCATCTATGTA 58.749 37.037 0.00 0.00 0.00 2.29
1702 1751 7.099764 CGGCTGGATTTAAGTATCATCTATGT 58.900 38.462 0.00 0.00 0.00 2.29
1703 1752 6.536582 CCGGCTGGATTTAAGTATCATCTATG 59.463 42.308 5.28 0.00 37.49 2.23
1704 1753 6.440647 TCCGGCTGGATTTAAGTATCATCTAT 59.559 38.462 11.27 0.00 40.17 1.98
1705 1754 5.778241 TCCGGCTGGATTTAAGTATCATCTA 59.222 40.000 11.27 0.00 40.17 1.98
1706 1755 4.593206 TCCGGCTGGATTTAAGTATCATCT 59.407 41.667 11.27 0.00 40.17 2.90
1707 1756 4.894784 TCCGGCTGGATTTAAGTATCATC 58.105 43.478 11.27 0.00 40.17 2.92
1708 1757 4.974645 TCCGGCTGGATTTAAGTATCAT 57.025 40.909 11.27 0.00 40.17 2.45
1720 1769 2.970379 ATGTGCATGTCCGGCTGGA 61.970 57.895 11.27 11.27 43.88 3.86
1721 1770 2.438975 ATGTGCATGTCCGGCTGG 60.439 61.111 4.71 4.71 0.00 4.85
1722 1771 1.099295 ATCATGTGCATGTCCGGCTG 61.099 55.000 11.38 0.00 39.72 4.85
1723 1772 0.394762 AATCATGTGCATGTCCGGCT 60.395 50.000 11.38 0.00 39.72 5.52
1724 1773 0.248743 CAATCATGTGCATGTCCGGC 60.249 55.000 11.38 0.00 39.72 6.13
1725 1774 1.064505 GTCAATCATGTGCATGTCCGG 59.935 52.381 11.38 0.00 39.72 5.14
1726 1775 1.738908 TGTCAATCATGTGCATGTCCG 59.261 47.619 11.38 2.65 39.72 4.79
1727 1776 3.428452 CCTTGTCAATCATGTGCATGTCC 60.428 47.826 11.38 0.00 39.72 4.02
1728 1777 3.428452 CCCTTGTCAATCATGTGCATGTC 60.428 47.826 11.38 0.00 39.72 3.06
1729 1778 2.494471 CCCTTGTCAATCATGTGCATGT 59.506 45.455 11.38 0.00 39.72 3.21
1730 1779 2.737359 GCCCTTGTCAATCATGTGCATG 60.737 50.000 5.86 5.86 40.09 4.06
1731 1780 1.479323 GCCCTTGTCAATCATGTGCAT 59.521 47.619 0.00 0.00 0.00 3.96
1732 1781 0.889994 GCCCTTGTCAATCATGTGCA 59.110 50.000 0.00 0.00 0.00 4.57
1733 1782 0.889994 TGCCCTTGTCAATCATGTGC 59.110 50.000 0.00 0.00 0.00 4.57
1734 1783 1.203052 GGTGCCCTTGTCAATCATGTG 59.797 52.381 0.00 0.00 0.00 3.21
1735 1784 1.203038 TGGTGCCCTTGTCAATCATGT 60.203 47.619 0.00 0.00 0.00 3.21
1736 1785 1.475280 CTGGTGCCCTTGTCAATCATG 59.525 52.381 0.00 0.00 0.00 3.07
1737 1786 1.843368 CTGGTGCCCTTGTCAATCAT 58.157 50.000 0.00 0.00 0.00 2.45
1738 1787 0.895100 GCTGGTGCCCTTGTCAATCA 60.895 55.000 0.00 0.00 0.00 2.57
1739 1788 1.885871 GCTGGTGCCCTTGTCAATC 59.114 57.895 0.00 0.00 0.00 2.67
1740 1789 1.973281 CGCTGGTGCCCTTGTCAAT 60.973 57.895 0.00 0.00 35.36 2.57
1741 1790 2.594303 CGCTGGTGCCCTTGTCAA 60.594 61.111 0.00 0.00 35.36 3.18
1742 1791 4.641645 CCGCTGGTGCCCTTGTCA 62.642 66.667 0.00 0.00 35.36 3.58
1769 1818 0.840103 CACGATCTATGCACGACGTG 59.160 55.000 23.43 23.43 43.10 4.49
1770 1819 0.866061 GCACGATCTATGCACGACGT 60.866 55.000 12.56 0.00 42.88 4.34
1771 1820 1.840061 GCACGATCTATGCACGACG 59.160 57.895 12.56 0.00 42.88 5.12
1793 1842 2.913578 TGCTACCCACACGACCGT 60.914 61.111 0.00 0.00 0.00 4.83
1794 1843 2.126071 CTGCTACCCACACGACCG 60.126 66.667 0.00 0.00 0.00 4.79
1795 1844 0.250166 AAACTGCTACCCACACGACC 60.250 55.000 0.00 0.00 0.00 4.79
1796 1845 1.145803 GAAACTGCTACCCACACGAC 58.854 55.000 0.00 0.00 0.00 4.34
1797 1846 0.319211 CGAAACTGCTACCCACACGA 60.319 55.000 0.00 0.00 0.00 4.35
1798 1847 0.599204 ACGAAACTGCTACCCACACG 60.599 55.000 0.00 0.00 0.00 4.49
1799 1848 1.589803 AACGAAACTGCTACCCACAC 58.410 50.000 0.00 0.00 0.00 3.82
1800 1849 1.944024 CAAACGAAACTGCTACCCACA 59.056 47.619 0.00 0.00 0.00 4.17
1801 1850 1.944709 ACAAACGAAACTGCTACCCAC 59.055 47.619 0.00 0.00 0.00 4.61
1802 1851 2.335316 ACAAACGAAACTGCTACCCA 57.665 45.000 0.00 0.00 0.00 4.51
1803 1852 3.396560 AGTACAAACGAAACTGCTACCC 58.603 45.455 0.00 0.00 0.00 3.69
1804 1853 6.529463 TTTAGTACAAACGAAACTGCTACC 57.471 37.500 0.00 0.00 0.00 3.18
1805 1854 7.790000 TGATTTAGTACAAACGAAACTGCTAC 58.210 34.615 0.00 0.00 33.77 3.58
1806 1855 7.359765 GCTGATTTAGTACAAACGAAACTGCTA 60.360 37.037 0.00 0.00 33.77 3.49
1807 1856 6.565999 GCTGATTTAGTACAAACGAAACTGCT 60.566 38.462 0.00 0.00 33.77 4.24
1808 1857 5.564127 GCTGATTTAGTACAAACGAAACTGC 59.436 40.000 0.00 0.00 33.77 4.40
1809 1858 5.783654 CGCTGATTTAGTACAAACGAAACTG 59.216 40.000 0.00 0.00 33.77 3.16
1810 1859 5.693104 TCGCTGATTTAGTACAAACGAAACT 59.307 36.000 0.00 0.00 33.77 2.66
1811 1860 5.782200 GTCGCTGATTTAGTACAAACGAAAC 59.218 40.000 0.00 0.00 33.77 2.78
1812 1861 5.462729 TGTCGCTGATTTAGTACAAACGAAA 59.537 36.000 0.00 0.00 35.15 3.46
1813 1862 4.983538 TGTCGCTGATTTAGTACAAACGAA 59.016 37.500 0.00 0.00 0.00 3.85
1814 1863 4.548494 TGTCGCTGATTTAGTACAAACGA 58.452 39.130 0.00 0.00 0.00 3.85
1815 1864 4.896562 TGTCGCTGATTTAGTACAAACG 57.103 40.909 0.00 0.00 0.00 3.60
1816 1865 8.440833 ACTAATTGTCGCTGATTTAGTACAAAC 58.559 33.333 0.00 0.00 37.68 2.93
1817 1866 8.542497 ACTAATTGTCGCTGATTTAGTACAAA 57.458 30.769 0.00 0.00 37.68 2.83
1818 1867 9.811995 ATACTAATTGTCGCTGATTTAGTACAA 57.188 29.630 0.00 0.00 38.16 2.41
1819 1868 9.244799 CATACTAATTGTCGCTGATTTAGTACA 57.755 33.333 0.00 0.00 0.00 2.90
1820 1869 8.700644 CCATACTAATTGTCGCTGATTTAGTAC 58.299 37.037 0.00 0.00 0.00 2.73
1899 1948 1.816074 TTCCGGTTGAACTACCATGC 58.184 50.000 0.00 0.00 38.12 4.06
1905 1954 1.003812 CCACCCATTCCGGTTGAACTA 59.996 52.381 0.00 0.00 35.31 2.24
2069 2124 5.786401 AATACAAGAAGAAGCTAGCAACG 57.214 39.130 18.83 0.00 0.00 4.10
2084 2139 7.009174 GTGAAAACAACTGGTGTGAAATACAAG 59.991 37.037 0.00 0.00 40.60 3.16
2163 2223 6.445139 AGAGAATGACTTATTGGAGGAAGGAA 59.555 38.462 0.00 0.00 0.00 3.36
2167 2227 5.726308 TGGAGAGAATGACTTATTGGAGGAA 59.274 40.000 0.00 0.00 0.00 3.36
2247 2307 2.191400 CCCTGTGGAGAATTGAGAGGA 58.809 52.381 0.00 0.00 0.00 3.71
2305 2365 1.078848 CTTGGGCTTGTCGAGGGAG 60.079 63.158 0.00 0.00 0.00 4.30
2340 2400 9.003658 TGTTTTTCTTTTTAGAAAACATTGGCA 57.996 25.926 11.43 0.00 44.41 4.92
2346 2406 9.712305 TGGTCATGTTTTTCTTTTTAGAAAACA 57.288 25.926 13.77 13.77 44.41 2.83
2348 2408 9.377312 CCTGGTCATGTTTTTCTTTTTAGAAAA 57.623 29.630 8.55 8.55 43.46 2.29
2349 2409 7.984617 CCCTGGTCATGTTTTTCTTTTTAGAAA 59.015 33.333 0.00 0.00 36.17 2.52
2350 2410 7.418483 CCCCTGGTCATGTTTTTCTTTTTAGAA 60.418 37.037 0.00 0.00 0.00 2.10
2351 2411 6.041523 CCCCTGGTCATGTTTTTCTTTTTAGA 59.958 38.462 0.00 0.00 0.00 2.10
2352 2412 6.223120 CCCCTGGTCATGTTTTTCTTTTTAG 58.777 40.000 0.00 0.00 0.00 1.85
2353 2413 5.071115 CCCCCTGGTCATGTTTTTCTTTTTA 59.929 40.000 0.00 0.00 0.00 1.52
2354 2414 4.141505 CCCCCTGGTCATGTTTTTCTTTTT 60.142 41.667 0.00 0.00 0.00 1.94
2355 2415 3.390967 CCCCCTGGTCATGTTTTTCTTTT 59.609 43.478 0.00 0.00 0.00 2.27
2356 2416 2.972021 CCCCCTGGTCATGTTTTTCTTT 59.028 45.455 0.00 0.00 0.00 2.52
2357 2417 2.178984 TCCCCCTGGTCATGTTTTTCTT 59.821 45.455 0.00 0.00 0.00 2.52
2358 2418 1.786441 TCCCCCTGGTCATGTTTTTCT 59.214 47.619 0.00 0.00 0.00 2.52
2359 2419 1.893137 GTCCCCCTGGTCATGTTTTTC 59.107 52.381 0.00 0.00 0.00 2.29
2360 2420 1.219213 TGTCCCCCTGGTCATGTTTTT 59.781 47.619 0.00 0.00 0.00 1.94
2361 2421 0.856982 TGTCCCCCTGGTCATGTTTT 59.143 50.000 0.00 0.00 0.00 2.43
2461 2521 4.609947 TGCAGTTAGCTGTTGAACAATTG 58.390 39.130 8.48 3.24 45.94 2.32
2608 2668 5.304686 AGTCATAAACAGTCCAACCTTCA 57.695 39.130 0.00 0.00 0.00 3.02
2609 2669 6.486993 AGAAAGTCATAAACAGTCCAACCTTC 59.513 38.462 0.00 0.00 0.00 3.46
2692 2752 4.584325 ACTGCAAACTGGCAAGATTCTTTA 59.416 37.500 0.00 0.00 44.40 1.85
2768 2828 3.073356 ACACTTATTTTGGAACGGAGGGA 59.927 43.478 0.00 0.00 0.00 4.20
2770 2830 4.277423 ACAACACTTATTTTGGAACGGAGG 59.723 41.667 0.00 0.00 0.00 4.30
2771 2831 5.212194 CACAACACTTATTTTGGAACGGAG 58.788 41.667 0.00 0.00 0.00 4.63
2824 2908 4.645588 TCCCACCGTTTCAAAATAAGTGTT 59.354 37.500 0.00 0.00 0.00 3.32
2829 2913 8.632906 TTAATACTCCCACCGTTTCAAAATAA 57.367 30.769 0.00 0.00 0.00 1.40
2837 2921 5.952347 AGAGATTAATACTCCCACCGTTT 57.048 39.130 9.79 0.00 35.27 3.60
2917 3001 5.657745 TGTATCCTCAATTGTGGCAATCAAT 59.342 36.000 19.62 10.50 37.14 2.57
3014 3098 7.044181 TGTTAGAGATGGCATCTTAACTGAAG 58.956 38.462 32.87 0.00 40.38 3.02
3076 3160 2.263895 AGGTGGTGCTCCCTACATAA 57.736 50.000 1.59 0.00 0.00 1.90
3187 3271 2.939103 GACCCAGATGTGATCTTTTCCG 59.061 50.000 0.00 0.00 37.58 4.30
3274 3358 1.102154 TTGGCATAATGGGCACTTCG 58.898 50.000 0.00 0.00 43.63 3.79
3355 3439 3.113260 ACGTTTCCTGTCAGAAGAAGG 57.887 47.619 0.00 1.86 0.00 3.46
3637 3884 1.753930 TCATTCAGCAATGGTCGCAT 58.246 45.000 0.00 0.00 40.08 4.73
3673 3920 8.139350 GGATGCAAAATATCATGAATCAGTCAA 58.861 33.333 0.00 0.00 40.50 3.18
4120 4384 4.853924 ACAGTGGGCATAAAAAGAAGTG 57.146 40.909 0.00 0.00 0.00 3.16
4235 4538 6.587226 CCAATCACACAATCAAACACAATAGG 59.413 38.462 0.00 0.00 0.00 2.57
4249 4552 4.318332 GAGAGACACATCCAATCACACAA 58.682 43.478 0.00 0.00 0.00 3.33
4255 4558 4.054671 GGATTCGAGAGACACATCCAATC 58.945 47.826 5.37 0.00 42.15 2.67
4285 4588 8.745590 AGAAAGAATACAGGAGAGAGAAACTAC 58.254 37.037 0.00 0.00 0.00 2.73
4873 5215 0.623723 GTTAGGCAGGATGGGGTCAA 59.376 55.000 0.00 0.00 35.86 3.18
5110 5504 8.931775 ACAAAATTAACACAACAGAAAAAGGTC 58.068 29.630 0.00 0.00 0.00 3.85
5121 5515 8.696410 TCTGAAAGGAACAAAATTAACACAAC 57.304 30.769 0.00 0.00 0.00 3.32
5700 6095 8.131100 AGTTCAGTTTGTGACACAAGATAATTG 58.869 33.333 19.74 12.55 39.53 2.32
5722 6117 6.759497 ATATGCTTAGGGACACAAAAGTTC 57.241 37.500 0.00 0.00 0.00 3.01
5751 6146 6.434028 TCACCATTTTCCAGAAGTAAATCCAG 59.566 38.462 0.00 0.00 0.00 3.86
5757 6152 7.889873 TTTTCTCACCATTTTCCAGAAGTAA 57.110 32.000 0.00 0.00 0.00 2.24
5810 6205 1.118838 ATGACTAGGCAGGTGAGCTC 58.881 55.000 3.72 6.82 34.17 4.09
5833 6228 9.213777 TCCAGAAGTAGATCCACAAGTTAATAT 57.786 33.333 0.00 0.00 0.00 1.28
5840 6235 6.989169 CCTATTTCCAGAAGTAGATCCACAAG 59.011 42.308 10.54 0.00 33.91 3.16
6032 6429 3.469739 GACCAGGTAGACCGAACAAAAA 58.530 45.455 0.00 0.00 42.08 1.94
6132 6533 0.810031 CGGTGATGATCGTTGTCCCC 60.810 60.000 0.00 0.00 0.00 4.81
6140 6541 3.453424 TGTTACATTCCGGTGATGATCG 58.547 45.455 21.71 2.13 0.00 3.69
6179 6580 7.356680 TCCCATCACCATGAGAAATTAGAAAT 58.643 34.615 0.00 0.00 30.57 2.17
6340 6741 5.009610 GGACAAGTTGCAGAAGAAATAACCA 59.990 40.000 1.81 0.00 0.00 3.67
6403 6804 5.356426 TGACATCTTTATGGACCATGTACG 58.644 41.667 17.73 3.21 37.43 3.67
6446 6847 2.024176 AAACCATTTTCCTGGACCCC 57.976 50.000 0.00 0.00 39.73 4.95
6575 6976 6.385537 GACAAAATGAGATGTCATGTTTGC 57.614 37.500 24.15 18.11 43.04 3.68
6855 7256 7.095187 GCTCATTGTTACCTATAGCCAACATAC 60.095 40.741 14.54 4.16 31.45 2.39
7041 7442 2.874648 TATCGCAAGGCCAGCACAGG 62.875 60.000 18.67 4.15 38.47 4.00
7316 7717 4.663889 CGTGGCGATTTCTTTTGCATTTTC 60.664 41.667 0.00 0.00 0.00 2.29
7334 7735 6.481954 TTCTTTTCTTTCTTCTATCGTGGC 57.518 37.500 0.00 0.00 0.00 5.01
7872 8297 5.118990 TGCTTTCTTCACCTCAGCATATAC 58.881 41.667 0.00 0.00 35.56 1.47
7873 8298 5.357742 TGCTTTCTTCACCTCAGCATATA 57.642 39.130 0.00 0.00 35.56 0.86
7922 8347 3.254060 GCGAGAGAGAGCACACAAATAA 58.746 45.455 0.00 0.00 0.00 1.40
7933 8358 6.401047 CGTTCTCTTATATCTGCGAGAGAGAG 60.401 46.154 0.00 0.00 43.75 3.20
7940 8365 4.084171 CGTACCGTTCTCTTATATCTGCGA 60.084 45.833 0.00 0.00 0.00 5.10
7941 8366 4.084171 TCGTACCGTTCTCTTATATCTGCG 60.084 45.833 0.00 0.00 0.00 5.18
7944 8369 6.932356 TGTTCGTACCGTTCTCTTATATCT 57.068 37.500 0.00 0.00 0.00 1.98
7978 8403 3.367703 CCAGATTTTGTCAATGAGTGGCC 60.368 47.826 0.00 0.00 0.00 5.36
7979 8404 3.841643 CCAGATTTTGTCAATGAGTGGC 58.158 45.455 0.00 0.00 0.00 5.01
8032 8539 1.026718 GGAACTGCGGAACCAGATGG 61.027 60.000 0.00 0.00 42.17 3.51
8033 8540 0.321564 TGGAACTGCGGAACCAGATG 60.322 55.000 0.00 0.00 36.67 2.90
8034 8541 0.321653 GTGGAACTGCGGAACCAGAT 60.322 55.000 13.75 0.00 36.67 2.90
8035 8542 1.070786 GTGGAACTGCGGAACCAGA 59.929 57.895 13.75 0.00 36.67 3.86
8036 8543 2.317609 CGTGGAACTGCGGAACCAG 61.318 63.158 13.75 6.71 38.78 4.00
8038 8545 0.390735 ATACGTGGAACTGCGGAACC 60.391 55.000 0.00 2.40 31.75 3.62
8039 8546 1.435577 AATACGTGGAACTGCGGAAC 58.564 50.000 0.00 0.00 31.75 3.62
8040 8547 1.801771 CAAATACGTGGAACTGCGGAA 59.198 47.619 0.00 0.00 31.75 4.30
8041 8548 1.270412 ACAAATACGTGGAACTGCGGA 60.270 47.619 0.00 0.00 31.75 5.54
8042 8549 1.153353 ACAAATACGTGGAACTGCGG 58.847 50.000 0.00 0.00 31.75 5.69
8043 8550 2.961522 AACAAATACGTGGAACTGCG 57.038 45.000 0.00 0.00 31.75 5.18
8044 8551 7.478520 AGATATAACAAATACGTGGAACTGC 57.521 36.000 0.00 0.00 31.75 4.40
8046 8553 7.012044 GCCAAGATATAACAAATACGTGGAACT 59.988 37.037 0.00 0.00 31.75 3.01
8048 8555 6.018588 CGCCAAGATATAACAAATACGTGGAA 60.019 38.462 0.00 0.00 0.00 3.53
8049 8556 5.464057 CGCCAAGATATAACAAATACGTGGA 59.536 40.000 0.00 0.00 0.00 4.02
8051 8558 6.519353 TCGCCAAGATATAACAAATACGTG 57.481 37.500 0.00 0.00 0.00 4.49
8052 8559 6.535865 TGTTCGCCAAGATATAACAAATACGT 59.464 34.615 0.00 0.00 0.00 3.57
8053 8560 6.939627 TGTTCGCCAAGATATAACAAATACG 58.060 36.000 0.00 0.00 0.00 3.06
8059 8566 6.824196 TGGTATTTGTTCGCCAAGATATAACA 59.176 34.615 0.00 0.00 33.75 2.41
8060 8567 7.130269 GTGGTATTTGTTCGCCAAGATATAAC 58.870 38.462 0.00 0.00 33.75 1.89
8061 8568 6.824196 TGTGGTATTTGTTCGCCAAGATATAA 59.176 34.615 0.00 0.00 33.75 0.98
8062 8569 6.350103 TGTGGTATTTGTTCGCCAAGATATA 58.650 36.000 0.00 0.00 33.75 0.86
8066 8573 2.852449 TGTGGTATTTGTTCGCCAAGA 58.148 42.857 0.00 0.00 33.75 3.02
8067 8574 3.564511 CTTGTGGTATTTGTTCGCCAAG 58.435 45.455 0.00 0.00 33.75 3.61
8068 8575 2.287909 GCTTGTGGTATTTGTTCGCCAA 60.288 45.455 0.00 0.00 32.26 4.52
8070 8577 1.402325 GGCTTGTGGTATTTGTTCGCC 60.402 52.381 0.00 0.00 0.00 5.54
8071 8578 1.727857 CGGCTTGTGGTATTTGTTCGC 60.728 52.381 0.00 0.00 0.00 4.70
8072 8579 1.801771 TCGGCTTGTGGTATTTGTTCG 59.198 47.619 0.00 0.00 0.00 3.95
8074 8581 1.883926 GGTCGGCTTGTGGTATTTGTT 59.116 47.619 0.00 0.00 0.00 2.83
8075 8582 1.073284 AGGTCGGCTTGTGGTATTTGT 59.927 47.619 0.00 0.00 0.00 2.83
8076 8583 1.821216 AGGTCGGCTTGTGGTATTTG 58.179 50.000 0.00 0.00 0.00 2.32
8129 8638 6.294473 CAGTGACCTAAGGATTTATCTGCAT 58.706 40.000 0.00 0.00 0.00 3.96
8230 8739 7.337826 TCACCCCCTCTAATCTAAAGAAAAA 57.662 36.000 0.00 0.00 0.00 1.94
8231 8740 6.963117 TCACCCCCTCTAATCTAAAGAAAA 57.037 37.500 0.00 0.00 0.00 2.29
8232 8741 6.575649 CGTTCACCCCCTCTAATCTAAAGAAA 60.576 42.308 0.00 0.00 0.00 2.52
8233 8742 5.105064 CGTTCACCCCCTCTAATCTAAAGAA 60.105 44.000 0.00 0.00 0.00 2.52
8234 8743 4.404715 CGTTCACCCCCTCTAATCTAAAGA 59.595 45.833 0.00 0.00 0.00 2.52
8235 8744 4.404715 TCGTTCACCCCCTCTAATCTAAAG 59.595 45.833 0.00 0.00 0.00 1.85
8236 8745 4.355549 TCGTTCACCCCCTCTAATCTAAA 58.644 43.478 0.00 0.00 0.00 1.85
8237 8746 3.985127 TCGTTCACCCCCTCTAATCTAA 58.015 45.455 0.00 0.00 0.00 2.10
8238 8747 3.675348 TCGTTCACCCCCTCTAATCTA 57.325 47.619 0.00 0.00 0.00 1.98
8239 8748 2.544844 TCGTTCACCCCCTCTAATCT 57.455 50.000 0.00 0.00 0.00 2.40
8240 8749 3.840124 ATTCGTTCACCCCCTCTAATC 57.160 47.619 0.00 0.00 0.00 1.75
8241 8750 3.265995 ACAATTCGTTCACCCCCTCTAAT 59.734 43.478 0.00 0.00 0.00 1.73
8242 8751 2.640826 ACAATTCGTTCACCCCCTCTAA 59.359 45.455 0.00 0.00 0.00 2.10
8243 8752 2.262637 ACAATTCGTTCACCCCCTCTA 58.737 47.619 0.00 0.00 0.00 2.43
8244 8753 1.064825 ACAATTCGTTCACCCCCTCT 58.935 50.000 0.00 0.00 0.00 3.69
8245 8754 1.905637 AACAATTCGTTCACCCCCTC 58.094 50.000 0.00 0.00 29.27 4.30
8246 8755 1.960689 CAAACAATTCGTTCACCCCCT 59.039 47.619 0.00 0.00 36.59 4.79
8247 8756 1.000394 CCAAACAATTCGTTCACCCCC 60.000 52.381 0.00 0.00 36.59 5.40
8248 8757 1.000394 CCCAAACAATTCGTTCACCCC 60.000 52.381 0.00 0.00 36.59 4.95
8249 8758 1.684450 ACCCAAACAATTCGTTCACCC 59.316 47.619 0.00 0.00 36.59 4.61
8250 8759 3.446310 AACCCAAACAATTCGTTCACC 57.554 42.857 0.00 0.00 36.59 4.02
8251 8760 4.177783 ACAAACCCAAACAATTCGTTCAC 58.822 39.130 0.00 0.00 36.59 3.18
8252 8761 4.457834 ACAAACCCAAACAATTCGTTCA 57.542 36.364 0.00 0.00 36.59 3.18
8253 8762 6.889019 TTTACAAACCCAAACAATTCGTTC 57.111 33.333 0.00 0.00 36.59 3.95
8254 8763 7.334671 ACATTTTACAAACCCAAACAATTCGTT 59.665 29.630 0.00 0.00 40.50 3.85
8255 8764 6.819146 ACATTTTACAAACCCAAACAATTCGT 59.181 30.769 0.00 0.00 0.00 3.85
8256 8765 7.240414 ACATTTTACAAACCCAAACAATTCG 57.760 32.000 0.00 0.00 0.00 3.34
8259 8768 9.449719 TGTTAACATTTTACAAACCCAAACAAT 57.550 25.926 3.59 0.00 0.00 2.71
8260 8769 8.842358 TGTTAACATTTTACAAACCCAAACAA 57.158 26.923 3.59 0.00 0.00 2.83
8261 8770 8.842358 TTGTTAACATTTTACAAACCCAAACA 57.158 26.923 9.56 0.00 0.00 2.83
8266 8775 9.227490 GCAATTTTGTTAACATTTTACAAACCC 57.773 29.630 9.56 0.00 31.19 4.11
8267 8776 8.938928 CGCAATTTTGTTAACATTTTACAAACC 58.061 29.630 9.56 0.00 31.19 3.27
8268 8777 8.457562 GCGCAATTTTGTTAACATTTTACAAAC 58.542 29.630 9.56 0.00 31.19 2.93
8269 8778 7.370836 CGCGCAATTTTGTTAACATTTTACAAA 59.629 29.630 9.56 6.25 0.00 2.83
8270 8779 6.841286 CGCGCAATTTTGTTAACATTTTACAA 59.159 30.769 9.56 0.00 0.00 2.41
8271 8780 6.198403 TCGCGCAATTTTGTTAACATTTTACA 59.802 30.769 9.56 0.00 0.00 2.41
8272 8781 6.510307 GTCGCGCAATTTTGTTAACATTTTAC 59.490 34.615 9.56 0.00 0.00 2.01
8273 8782 6.198403 TGTCGCGCAATTTTGTTAACATTTTA 59.802 30.769 9.56 0.00 0.00 1.52
8274 8783 5.005779 TGTCGCGCAATTTTGTTAACATTTT 59.994 32.000 9.56 0.97 0.00 1.82
8275 8784 4.504461 TGTCGCGCAATTTTGTTAACATTT 59.496 33.333 9.56 1.33 0.00 2.32
8276 8785 4.045104 TGTCGCGCAATTTTGTTAACATT 58.955 34.783 9.56 0.00 0.00 2.71
8277 8786 3.423867 GTGTCGCGCAATTTTGTTAACAT 59.576 39.130 9.56 0.00 0.00 2.71
8278 8787 2.784380 GTGTCGCGCAATTTTGTTAACA 59.216 40.909 8.75 3.59 0.00 2.41
8279 8788 2.784380 TGTGTCGCGCAATTTTGTTAAC 59.216 40.909 8.75 0.00 0.00 2.01
8280 8789 3.066369 TGTGTCGCGCAATTTTGTTAA 57.934 38.095 8.75 0.00 0.00 2.01
8281 8790 2.757686 TGTGTCGCGCAATTTTGTTA 57.242 40.000 8.75 0.00 0.00 2.41
8282 8791 1.914634 TTGTGTCGCGCAATTTTGTT 58.085 40.000 8.75 0.00 0.00 2.83
8283 8792 1.914634 TTTGTGTCGCGCAATTTTGT 58.085 40.000 8.75 0.00 33.78 2.83
8284 8793 2.470628 TGATTTGTGTCGCGCAATTTTG 59.529 40.909 8.75 0.00 33.78 2.44
8285 8794 2.725723 CTGATTTGTGTCGCGCAATTTT 59.274 40.909 8.75 0.00 33.78 1.82
8286 8795 2.031245 TCTGATTTGTGTCGCGCAATTT 60.031 40.909 8.75 0.00 33.78 1.82
8287 8796 1.535028 TCTGATTTGTGTCGCGCAATT 59.465 42.857 8.75 0.00 33.78 2.32
8288 8797 1.135972 GTCTGATTTGTGTCGCGCAAT 60.136 47.619 8.75 0.00 33.78 3.56
8289 8798 0.234625 GTCTGATTTGTGTCGCGCAA 59.765 50.000 8.75 0.00 31.73 4.85
8290 8799 1.565156 GGTCTGATTTGTGTCGCGCA 61.565 55.000 8.75 0.00 0.00 6.09
8291 8800 1.132640 GGTCTGATTTGTGTCGCGC 59.867 57.895 0.00 0.00 0.00 6.86
8292 8801 1.787847 GGGTCTGATTTGTGTCGCG 59.212 57.895 0.00 0.00 0.00 5.87
8293 8802 0.669318 TCGGGTCTGATTTGTGTCGC 60.669 55.000 0.00 0.00 0.00 5.19
8294 8803 2.010145 ATCGGGTCTGATTTGTGTCG 57.990 50.000 0.00 0.00 0.00 4.35
8295 8804 3.127030 GGAAATCGGGTCTGATTTGTGTC 59.873 47.826 19.00 7.62 45.90 3.67
8296 8805 3.081804 GGAAATCGGGTCTGATTTGTGT 58.918 45.455 19.00 0.00 45.90 3.72
8297 8806 3.081061 TGGAAATCGGGTCTGATTTGTG 58.919 45.455 19.00 0.00 45.90 3.33
8298 8807 3.244911 ACTGGAAATCGGGTCTGATTTGT 60.245 43.478 19.00 10.31 45.90 2.83
8299 8808 3.127548 CACTGGAAATCGGGTCTGATTTG 59.872 47.826 19.00 9.81 45.90 2.32
8301 8810 2.941415 GCACTGGAAATCGGGTCTGATT 60.941 50.000 0.00 0.00 40.22 2.57
8302 8811 1.407437 GCACTGGAAATCGGGTCTGAT 60.407 52.381 0.00 0.00 0.00 2.90
8303 8812 0.036388 GCACTGGAAATCGGGTCTGA 60.036 55.000 0.00 0.00 0.00 3.27
8304 8813 0.036010 AGCACTGGAAATCGGGTCTG 60.036 55.000 0.00 0.00 0.00 3.51
8305 8814 0.250513 GAGCACTGGAAATCGGGTCT 59.749 55.000 0.00 0.00 0.00 3.85
8306 8815 1.084370 CGAGCACTGGAAATCGGGTC 61.084 60.000 0.00 0.00 0.00 4.46
8307 8816 1.079127 CGAGCACTGGAAATCGGGT 60.079 57.895 0.00 0.00 0.00 5.28
8308 8817 3.799753 CGAGCACTGGAAATCGGG 58.200 61.111 0.00 0.00 0.00 5.14
8310 8819 1.413767 CGTCCGAGCACTGGAAATCG 61.414 60.000 0.00 0.00 37.23 3.34
8311 8820 1.696832 GCGTCCGAGCACTGGAAATC 61.697 60.000 0.00 0.00 37.23 2.17
8312 8821 1.741770 GCGTCCGAGCACTGGAAAT 60.742 57.895 0.00 0.00 37.23 2.17
8313 8822 2.357034 GCGTCCGAGCACTGGAAA 60.357 61.111 0.00 0.00 37.23 3.13
8314 8823 3.611674 TGCGTCCGAGCACTGGAA 61.612 61.111 0.00 0.00 42.92 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.