Multiple sequence alignment - TraesCS7D01G322000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G322000 chr7D 100.000 2432 0 0 1 2432 412233878 412236309 0.000000e+00 4492.0
1 TraesCS7D01G322000 chr7D 91.126 755 52 10 6 749 105671118 105671868 0.000000e+00 1009.0
2 TraesCS7D01G322000 chr7D 92.787 305 22 0 1124 1428 412394869 412395173 2.220000e-120 442.0
3 TraesCS7D01G322000 chr7D 91.011 178 13 3 1981 2158 412385863 412386037 1.120000e-58 237.0
4 TraesCS7D01G322000 chr7D 95.082 122 6 0 1883 2004 412385799 412385920 2.470000e-45 193.0
5 TraesCS7D01G322000 chr7D 95.000 60 1 2 1981 2040 412235824 412235881 2.570000e-15 93.5
6 TraesCS7D01G322000 chr7D 95.000 60 1 2 1947 2004 412235858 412235917 2.570000e-15 93.5
7 TraesCS7D01G322000 chr7A 91.925 1127 39 17 745 1845 473674169 473675269 0.000000e+00 1530.0
8 TraesCS7D01G322000 chr7A 92.787 305 22 0 1124 1428 473807678 473807982 2.220000e-120 442.0
9 TraesCS7D01G322000 chr7A 82.913 357 36 20 2086 2430 664410105 664409762 5.080000e-77 298.0
10 TraesCS7D01G322000 chr7B 90.885 1130 48 22 745 1845 426788431 426789534 0.000000e+00 1465.0
11 TraesCS7D01G322000 chr7B 92.459 305 23 0 1124 1428 426833518 426833822 1.030000e-118 436.0
12 TraesCS7D01G322000 chr2D 93.113 755 41 8 1 746 641228402 641227650 0.000000e+00 1096.0
13 TraesCS7D01G322000 chr2D 91.079 751 57 8 1 746 425538120 425537375 0.000000e+00 1007.0
14 TraesCS7D01G322000 chr2D 89.716 282 26 3 1883 2164 469904275 469904553 8.270000e-95 357.0
15 TraesCS7D01G322000 chr2D 95.349 172 7 1 2260 2430 542154633 542154804 3.080000e-69 272.0
16 TraesCS7D01G322000 chr1D 92.513 748 49 5 1 746 467498484 467497742 0.000000e+00 1064.0
17 TraesCS7D01G322000 chr1D 92.021 752 52 6 1 746 54194476 54195225 0.000000e+00 1050.0
18 TraesCS7D01G322000 chr1D 90.716 754 56 10 1 748 366488010 366488755 0.000000e+00 992.0
19 TraesCS7D01G322000 chr4D 91.622 752 52 7 1 746 294457702 294456956 0.000000e+00 1029.0
20 TraesCS7D01G322000 chr4D 93.678 174 10 1 2260 2432 446487079 446487252 2.400000e-65 259.0
21 TraesCS7D01G322000 chr6D 90.897 747 62 6 4 746 75113393 75112649 0.000000e+00 998.0
22 TraesCS7D01G322000 chr6A 90.837 753 56 10 1 746 595632481 595631735 0.000000e+00 996.0
23 TraesCS7D01G322000 chr6A 94.767 172 8 1 2260 2430 575547048 575546877 1.430000e-67 267.0
24 TraesCS7D01G322000 chr5B 81.917 459 61 12 1982 2430 302239012 302238566 3.820000e-98 368.0
25 TraesCS7D01G322000 chr5B 94.767 172 8 1 2260 2430 410720010 410719839 1.430000e-67 267.0
26 TraesCS7D01G322000 chr5D 87.227 321 23 12 2119 2430 407513758 407513447 1.380000e-92 350.0
27 TraesCS7D01G322000 chr3A 94.767 172 8 1 2260 2430 729339931 729340102 1.430000e-67 267.0
28 TraesCS7D01G322000 chr6B 79.730 296 42 15 2096 2387 668672771 668672490 5.300000e-47 198.0
29 TraesCS7D01G322000 chr2A 79.885 174 22 11 2266 2430 439205793 439205624 5.490000e-22 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G322000 chr7D 412233878 412236309 2431 False 1559.666667 4492 96.666667 1 2432 3 chr7D.!!$F3 2431
1 TraesCS7D01G322000 chr7D 105671118 105671868 750 False 1009.000000 1009 91.126000 6 749 1 chr7D.!!$F1 743
2 TraesCS7D01G322000 chr7A 473674169 473675269 1100 False 1530.000000 1530 91.925000 745 1845 1 chr7A.!!$F1 1100
3 TraesCS7D01G322000 chr7B 426788431 426789534 1103 False 1465.000000 1465 90.885000 745 1845 1 chr7B.!!$F1 1100
4 TraesCS7D01G322000 chr2D 641227650 641228402 752 True 1096.000000 1096 93.113000 1 746 1 chr2D.!!$R2 745
5 TraesCS7D01G322000 chr2D 425537375 425538120 745 True 1007.000000 1007 91.079000 1 746 1 chr2D.!!$R1 745
6 TraesCS7D01G322000 chr1D 467497742 467498484 742 True 1064.000000 1064 92.513000 1 746 1 chr1D.!!$R1 745
7 TraesCS7D01G322000 chr1D 54194476 54195225 749 False 1050.000000 1050 92.021000 1 746 1 chr1D.!!$F1 745
8 TraesCS7D01G322000 chr1D 366488010 366488755 745 False 992.000000 992 90.716000 1 748 1 chr1D.!!$F2 747
9 TraesCS7D01G322000 chr4D 294456956 294457702 746 True 1029.000000 1029 91.622000 1 746 1 chr4D.!!$R1 745
10 TraesCS7D01G322000 chr6D 75112649 75113393 744 True 998.000000 998 90.897000 4 746 1 chr6D.!!$R1 742
11 TraesCS7D01G322000 chr6A 595631735 595632481 746 True 996.000000 996 90.837000 1 746 1 chr6A.!!$R2 745

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
718 748 0.106669 GGGCGATTTTTAGGGCCTCT 60.107 55.0 10.74 0.0 44.91 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2201 2289 0.030101 TTTGCTTTTTCCGGCGACTG 59.97 50.0 9.3 0.0 0.0 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
201 202 2.202866 GGCTTCTCCGATGAGGACA 58.797 57.895 0.00 0.00 45.98 4.02
425 444 2.722487 GGAGGCGACGACGATGAT 59.278 61.111 12.29 0.00 42.66 2.45
521 540 2.577378 GCGAGGAAGACGACGAGC 60.577 66.667 0.00 0.00 0.00 5.03
712 742 2.024414 CCTCAAGGGGCGATTTTTAGG 58.976 52.381 0.00 0.00 0.00 2.69
718 748 0.106669 GGGCGATTTTTAGGGCCTCT 60.107 55.000 10.74 0.00 44.91 3.69
719 749 1.142262 GGGCGATTTTTAGGGCCTCTA 59.858 52.381 10.74 0.00 44.91 2.43
720 750 2.422377 GGGCGATTTTTAGGGCCTCTAA 60.422 50.000 10.74 2.49 44.91 2.10
731 761 1.691823 GCCTCTAAAGGGGCCAACT 59.308 57.895 9.94 0.00 43.58 3.16
931 961 2.524394 TCCATCCCCTAGCTCGCC 60.524 66.667 0.00 0.00 0.00 5.54
950 980 0.760945 CCGCCTATCCTCTCCACCTT 60.761 60.000 0.00 0.00 0.00 3.50
976 1006 1.423395 CACACAGAGAAAGAGCGTCC 58.577 55.000 0.00 0.00 0.00 4.79
1350 1380 2.501610 GACGACCAGATGGAGGCC 59.498 66.667 5.72 0.00 38.94 5.19
1458 1488 6.516718 TGCTATACCTATCTCTCTTTGCAAC 58.483 40.000 0.00 0.00 0.00 4.17
1459 1489 5.631512 GCTATACCTATCTCTCTTTGCAACG 59.368 44.000 0.00 0.00 0.00 4.10
1460 1490 5.854010 ATACCTATCTCTCTTTGCAACGA 57.146 39.130 0.00 0.94 0.00 3.85
1502 1567 7.956328 ATTATCTCCTTATCATGCATGCATT 57.044 32.000 30.32 19.40 33.90 3.56
1518 1587 2.092267 TGCATTGACATGGCCAGATACT 60.092 45.455 13.05 0.00 0.00 2.12
1554 1623 1.258720 TCGAATGAATTGCTCGATGCG 59.741 47.619 0.00 0.00 46.63 4.73
1557 1626 1.655484 ATGAATTGCTCGATGCGTGA 58.345 45.000 0.00 0.00 46.63 4.35
1562 1631 0.447406 TTGCTCGATGCGTGATTTGG 59.553 50.000 0.00 0.00 46.63 3.28
1579 1648 8.116753 CGTGATTTGGTCAAGTAATAATGTCTC 58.883 37.037 0.00 0.00 38.90 3.36
1638 1721 6.019075 TGTCGTAATACTAGCGTGTACGTAAT 60.019 38.462 0.00 0.00 42.22 1.89
1641 1724 6.845782 CGTAATACTAGCGTGTACGTAATTCA 59.154 38.462 0.00 0.00 42.22 2.57
1672 1755 1.883678 TGAATCCTGATGGCTGAGGA 58.116 50.000 0.00 0.00 42.67 3.71
1686 1772 3.957497 GGCTGAGGAGTCTCTCTGATTAA 59.043 47.826 15.11 0.00 40.58 1.40
1726 1812 7.823745 AATTAAGAGACTGTTGAATGTTGGT 57.176 32.000 0.00 0.00 0.00 3.67
1727 1813 7.823745 ATTAAGAGACTGTTGAATGTTGGTT 57.176 32.000 0.00 0.00 0.00 3.67
1728 1814 7.639113 TTAAGAGACTGTTGAATGTTGGTTT 57.361 32.000 0.00 0.00 0.00 3.27
1729 1815 5.757850 AGAGACTGTTGAATGTTGGTTTC 57.242 39.130 0.00 0.00 0.00 2.78
1730 1816 4.580580 AGAGACTGTTGAATGTTGGTTTCC 59.419 41.667 0.00 0.00 0.00 3.13
1731 1817 4.277476 AGACTGTTGAATGTTGGTTTCCA 58.723 39.130 0.00 0.00 0.00 3.53
1732 1818 4.339247 AGACTGTTGAATGTTGGTTTCCAG 59.661 41.667 0.00 0.00 33.81 3.86
1733 1819 3.384467 ACTGTTGAATGTTGGTTTCCAGG 59.616 43.478 0.00 0.00 33.81 4.45
1734 1820 3.636300 CTGTTGAATGTTGGTTTCCAGGA 59.364 43.478 0.00 0.00 33.81 3.86
1735 1821 4.026744 TGTTGAATGTTGGTTTCCAGGAA 58.973 39.130 0.00 0.00 33.81 3.36
1736 1822 4.653341 TGTTGAATGTTGGTTTCCAGGAAT 59.347 37.500 1.58 0.00 33.81 3.01
1756 1842 6.096001 AGGAATTTGATGAACATCTTACCTGC 59.904 38.462 14.50 3.33 38.60 4.85
1758 1844 2.905075 TGATGAACATCTTACCTGCGG 58.095 47.619 14.50 0.00 38.60 5.69
1770 1858 2.029838 ACCTGCGGCTTTCTTCTATG 57.970 50.000 0.00 0.00 0.00 2.23
1812 1900 8.832521 TGTTACGACTTGTTTCAATATGAGTTT 58.167 29.630 0.00 0.00 0.00 2.66
1813 1901 9.659830 GTTACGACTTGTTTCAATATGAGTTTT 57.340 29.630 0.00 0.00 0.00 2.43
1814 1902 9.658475 TTACGACTTGTTTCAATATGAGTTTTG 57.342 29.630 0.00 0.00 0.00 2.44
1815 1903 7.925993 ACGACTTGTTTCAATATGAGTTTTGA 58.074 30.769 0.00 0.00 0.00 2.69
1816 1904 8.070171 ACGACTTGTTTCAATATGAGTTTTGAG 58.930 33.333 0.00 0.00 33.68 3.02
1817 1905 8.070171 CGACTTGTTTCAATATGAGTTTTGAGT 58.930 33.333 0.00 0.00 33.68 3.41
1818 1906 9.736023 GACTTGTTTCAATATGAGTTTTGAGTT 57.264 29.630 0.00 0.00 33.68 3.01
1823 1911 5.688823 TCAATATGAGTTTTGAGTTGCACG 58.311 37.500 0.00 0.00 0.00 5.34
1845 1933 8.798153 GCACGATTTCCTCATTATTTTGTTTAG 58.202 33.333 0.00 0.00 0.00 1.85
1846 1934 8.798153 CACGATTTCCTCATTATTTTGTTTAGC 58.202 33.333 0.00 0.00 0.00 3.09
1847 1935 8.739972 ACGATTTCCTCATTATTTTGTTTAGCT 58.260 29.630 0.00 0.00 0.00 3.32
1848 1936 9.573133 CGATTTCCTCATTATTTTGTTTAGCTT 57.427 29.630 0.00 0.00 0.00 3.74
1850 1938 8.532977 TTTCCTCATTATTTTGTTTAGCTTGC 57.467 30.769 0.00 0.00 0.00 4.01
1851 1939 7.225784 TCCTCATTATTTTGTTTAGCTTGCA 57.774 32.000 0.00 0.00 0.00 4.08
1852 1940 7.665690 TCCTCATTATTTTGTTTAGCTTGCAA 58.334 30.769 0.00 0.00 0.00 4.08
1853 1941 8.147058 TCCTCATTATTTTGTTTAGCTTGCAAA 58.853 29.630 0.00 0.00 0.00 3.68
1854 1942 8.772705 CCTCATTATTTTGTTTAGCTTGCAAAA 58.227 29.630 18.34 18.34 43.33 2.44
1861 1949 7.783090 TTTGTTTAGCTTGCAAAATGATTCA 57.217 28.000 0.00 0.00 0.00 2.57
1862 1950 7.410800 TTGTTTAGCTTGCAAAATGATTCAG 57.589 32.000 0.00 0.00 0.00 3.02
1863 1951 5.927689 TGTTTAGCTTGCAAAATGATTCAGG 59.072 36.000 0.00 0.00 0.00 3.86
1864 1952 2.968675 AGCTTGCAAAATGATTCAGGC 58.031 42.857 0.00 0.00 32.62 4.85
1865 1953 2.565834 AGCTTGCAAAATGATTCAGGCT 59.434 40.909 0.00 0.00 37.11 4.58
1866 1954 3.765511 AGCTTGCAAAATGATTCAGGCTA 59.234 39.130 0.00 0.00 39.56 3.93
1867 1955 4.110482 GCTTGCAAAATGATTCAGGCTAG 58.890 43.478 0.00 1.90 0.00 3.42
1868 1956 3.788333 TGCAAAATGATTCAGGCTAGC 57.212 42.857 6.04 6.04 0.00 3.42
1869 1957 3.090790 TGCAAAATGATTCAGGCTAGCA 58.909 40.909 18.24 0.00 0.00 3.49
1870 1958 3.129813 TGCAAAATGATTCAGGCTAGCAG 59.870 43.478 18.24 8.63 0.00 4.24
1871 1959 3.490419 GCAAAATGATTCAGGCTAGCAGG 60.490 47.826 18.24 7.84 0.00 4.85
1872 1960 3.939740 AAATGATTCAGGCTAGCAGGA 57.060 42.857 18.24 10.32 0.00 3.86
1873 1961 4.450305 AAATGATTCAGGCTAGCAGGAT 57.550 40.909 18.24 8.54 0.00 3.24
1874 1962 2.924757 TGATTCAGGCTAGCAGGATG 57.075 50.000 18.24 9.42 40.87 3.51
1875 1963 2.121948 TGATTCAGGCTAGCAGGATGT 58.878 47.619 18.24 5.18 39.31 3.06
1876 1964 2.507058 TGATTCAGGCTAGCAGGATGTT 59.493 45.455 18.24 1.64 39.31 2.71
1877 1965 3.054139 TGATTCAGGCTAGCAGGATGTTT 60.054 43.478 18.24 2.08 39.31 2.83
1878 1966 2.408271 TCAGGCTAGCAGGATGTTTG 57.592 50.000 18.24 1.72 39.31 2.93
1879 1967 1.630369 TCAGGCTAGCAGGATGTTTGT 59.370 47.619 18.24 0.00 39.31 2.83
1880 1968 2.040278 TCAGGCTAGCAGGATGTTTGTT 59.960 45.455 18.24 0.00 39.31 2.83
1881 1969 3.263170 TCAGGCTAGCAGGATGTTTGTTA 59.737 43.478 18.24 0.00 39.31 2.41
1882 1970 4.080356 TCAGGCTAGCAGGATGTTTGTTAT 60.080 41.667 18.24 0.00 39.31 1.89
1883 1971 4.036027 CAGGCTAGCAGGATGTTTGTTATG 59.964 45.833 18.24 0.00 39.31 1.90
1884 1972 3.947834 GGCTAGCAGGATGTTTGTTATGT 59.052 43.478 18.24 0.00 39.31 2.29
1885 1973 4.399303 GGCTAGCAGGATGTTTGTTATGTT 59.601 41.667 18.24 0.00 39.31 2.71
1886 1974 5.588648 GGCTAGCAGGATGTTTGTTATGTTA 59.411 40.000 18.24 0.00 39.31 2.41
1887 1975 6.238484 GGCTAGCAGGATGTTTGTTATGTTAG 60.238 42.308 18.24 0.00 39.31 2.34
1888 1976 6.238484 GCTAGCAGGATGTTTGTTATGTTAGG 60.238 42.308 10.63 0.00 39.31 2.69
1889 1977 5.815581 AGCAGGATGTTTGTTATGTTAGGA 58.184 37.500 0.00 0.00 39.31 2.94
1890 1978 6.426587 AGCAGGATGTTTGTTATGTTAGGAT 58.573 36.000 0.00 0.00 39.31 3.24
1891 1979 6.891908 AGCAGGATGTTTGTTATGTTAGGATT 59.108 34.615 0.00 0.00 39.31 3.01
1892 1980 7.397192 AGCAGGATGTTTGTTATGTTAGGATTT 59.603 33.333 0.00 0.00 39.31 2.17
1893 1981 8.682710 GCAGGATGTTTGTTATGTTAGGATTTA 58.317 33.333 0.00 0.00 39.31 1.40
1936 2024 7.462590 AGGGATAATCCTTCCTTGTATTTAGC 58.537 38.462 0.00 0.00 36.57 3.09
1937 2025 6.371825 GGGATAATCCTTCCTTGTATTTAGCG 59.628 42.308 0.00 0.00 36.57 4.26
1938 2026 6.935208 GGATAATCCTTCCTTGTATTTAGCGT 59.065 38.462 0.00 0.00 32.53 5.07
1939 2027 8.092687 GGATAATCCTTCCTTGTATTTAGCGTA 58.907 37.037 0.00 0.00 32.53 4.42
1940 2028 8.828688 ATAATCCTTCCTTGTATTTAGCGTAC 57.171 34.615 0.00 0.00 0.00 3.67
1941 2029 4.675510 TCCTTCCTTGTATTTAGCGTACG 58.324 43.478 11.84 11.84 0.00 3.67
1942 2030 3.800506 CCTTCCTTGTATTTAGCGTACGG 59.199 47.826 18.39 0.00 0.00 4.02
1943 2031 4.427312 CTTCCTTGTATTTAGCGTACGGT 58.573 43.478 24.61 24.61 0.00 4.83
1944 2032 4.454728 TCCTTGTATTTAGCGTACGGTT 57.545 40.909 26.37 10.42 0.00 4.44
1945 2033 4.819769 TCCTTGTATTTAGCGTACGGTTT 58.180 39.130 26.37 13.14 0.00 3.27
1946 2034 4.626604 TCCTTGTATTTAGCGTACGGTTTG 59.373 41.667 26.37 6.94 0.00 2.93
1947 2035 3.995412 TGTATTTAGCGTACGGTTTGC 57.005 42.857 26.37 14.22 0.00 3.68
1948 2036 2.672381 TGTATTTAGCGTACGGTTTGCC 59.328 45.455 26.37 10.55 0.00 4.52
1949 2037 2.103537 ATTTAGCGTACGGTTTGCCT 57.896 45.000 26.37 10.59 0.00 4.75
1950 2038 1.431496 TTTAGCGTACGGTTTGCCTC 58.569 50.000 26.37 0.76 0.00 4.70
1951 2039 0.390209 TTAGCGTACGGTTTGCCTCC 60.390 55.000 26.37 0.00 0.00 4.30
1952 2040 1.534336 TAGCGTACGGTTTGCCTCCA 61.534 55.000 26.37 1.21 0.00 3.86
1953 2041 2.388232 GCGTACGGTTTGCCTCCAG 61.388 63.158 18.39 0.00 0.00 3.86
1954 2042 1.740296 CGTACGGTTTGCCTCCAGG 60.740 63.158 7.57 0.00 38.53 4.45
1971 2059 3.820164 GCAACCGTCGCGTCGTAC 61.820 66.667 23.01 5.28 0.00 3.67
1972 2060 3.517699 CAACCGTCGCGTCGTACG 61.518 66.667 23.01 16.94 45.88 3.67
1973 2061 4.012895 AACCGTCGCGTCGTACGT 62.013 61.111 23.01 11.98 44.73 3.57
1979 2067 2.646862 CGCGTCGTACGTGCTAGG 60.647 66.667 24.67 10.69 45.29 3.02
1980 2068 2.277756 GCGTCGTACGTGCTAGGG 60.278 66.667 21.91 5.61 44.73 3.53
1981 2069 2.277756 CGTCGTACGTGCTAGGGC 60.278 66.667 16.05 0.00 36.74 5.19
1982 2070 2.103736 GTCGTACGTGCTAGGGCC 59.896 66.667 16.05 0.00 37.74 5.80
1983 2071 2.044650 TCGTACGTGCTAGGGCCT 60.045 61.111 16.05 12.58 37.74 5.19
1984 2072 2.117156 TCGTACGTGCTAGGGCCTC 61.117 63.158 10.74 0.00 37.74 4.70
1985 2073 2.119655 CGTACGTGCTAGGGCCTCT 61.120 63.158 10.74 0.00 37.74 3.69
1986 2074 1.734748 GTACGTGCTAGGGCCTCTC 59.265 63.158 10.74 3.18 37.74 3.20
1987 2075 1.822613 TACGTGCTAGGGCCTCTCG 60.823 63.158 10.74 12.39 37.74 4.04
1988 2076 2.261430 TACGTGCTAGGGCCTCTCGA 62.261 60.000 10.74 0.00 37.74 4.04
1989 2077 2.840066 CGTGCTAGGGCCTCTCGAG 61.840 68.421 10.74 5.93 37.74 4.04
1998 2086 2.182030 CCTCTCGAGGCAACCGTC 59.818 66.667 13.56 0.00 42.44 4.79
2000 2088 4.415332 TCTCGAGGCAACCGTCGC 62.415 66.667 13.56 0.00 45.91 5.19
2007 2095 3.820164 GCAACCGTCGCGTCGTAC 61.820 66.667 23.01 5.28 0.00 3.67
2008 2096 3.517699 CAACCGTCGCGTCGTACG 61.518 66.667 23.01 16.94 45.88 3.67
2009 2097 4.012895 AACCGTCGCGTCGTACGT 62.013 61.111 23.01 11.98 44.73 3.57
2015 2103 2.646862 CGCGTCGTACGTGCTAGG 60.647 66.667 24.67 10.69 45.29 3.02
2016 2104 2.277756 GCGTCGTACGTGCTAGGG 60.278 66.667 21.91 5.61 44.73 3.53
2017 2105 2.277756 CGTCGTACGTGCTAGGGC 60.278 66.667 16.05 0.00 36.74 5.19
2018 2106 2.103736 GTCGTACGTGCTAGGGCC 59.896 66.667 16.05 0.00 37.74 5.80
2019 2107 2.044650 TCGTACGTGCTAGGGCCT 60.045 61.111 16.05 12.58 37.74 5.19
2020 2108 2.117156 TCGTACGTGCTAGGGCCTC 61.117 63.158 10.74 0.00 37.74 4.70
2021 2109 2.119655 CGTACGTGCTAGGGCCTCT 61.120 63.158 10.74 0.00 37.74 3.69
2022 2110 1.734748 GTACGTGCTAGGGCCTCTC 59.265 63.158 10.74 3.18 37.74 3.20
2023 2111 1.822613 TACGTGCTAGGGCCTCTCG 60.823 63.158 10.74 12.39 37.74 4.04
2024 2112 2.261430 TACGTGCTAGGGCCTCTCGA 62.261 60.000 10.74 0.00 37.74 4.04
2025 2113 2.840066 CGTGCTAGGGCCTCTCGAG 61.840 68.421 10.74 5.93 37.74 4.04
2039 2127 3.607987 CGAGGCAATCGTCGCGTC 61.608 66.667 5.77 0.00 46.62 5.19
2040 2128 3.255379 GAGGCAATCGTCGCGTCC 61.255 66.667 5.77 0.00 38.11 4.79
2044 2132 3.179265 CAATCGTCGCGTCCGCTT 61.179 61.111 5.77 5.08 39.32 4.68
2045 2133 2.879462 AATCGTCGCGTCCGCTTC 60.879 61.111 5.77 1.95 39.32 3.86
2046 2134 3.338126 AATCGTCGCGTCCGCTTCT 62.338 57.895 5.77 0.00 39.32 2.85
2047 2135 3.736482 ATCGTCGCGTCCGCTTCTC 62.736 63.158 5.77 0.00 39.32 2.87
2051 2139 4.514577 CGCGTCCGCTTCTCCCAT 62.515 66.667 10.21 0.00 39.32 4.00
2052 2140 2.586357 GCGTCCGCTTCTCCCATC 60.586 66.667 4.10 0.00 38.26 3.51
2053 2141 3.082579 GCGTCCGCTTCTCCCATCT 62.083 63.158 4.10 0.00 38.26 2.90
2054 2142 1.066587 CGTCCGCTTCTCCCATCTC 59.933 63.158 0.00 0.00 0.00 2.75
2055 2143 1.443828 GTCCGCTTCTCCCATCTCC 59.556 63.158 0.00 0.00 0.00 3.71
2056 2144 1.001631 TCCGCTTCTCCCATCTCCA 59.998 57.895 0.00 0.00 0.00 3.86
2057 2145 0.399091 TCCGCTTCTCCCATCTCCAT 60.399 55.000 0.00 0.00 0.00 3.41
2058 2146 0.250209 CCGCTTCTCCCATCTCCATG 60.250 60.000 0.00 0.00 0.00 3.66
2059 2147 0.755079 CGCTTCTCCCATCTCCATGA 59.245 55.000 0.00 0.00 30.57 3.07
2060 2148 1.139654 CGCTTCTCCCATCTCCATGAA 59.860 52.381 0.00 0.00 30.57 2.57
2061 2149 2.570135 GCTTCTCCCATCTCCATGAAC 58.430 52.381 0.00 0.00 30.57 3.18
2062 2150 2.092753 GCTTCTCCCATCTCCATGAACA 60.093 50.000 0.00 0.00 30.57 3.18
2063 2151 3.806380 CTTCTCCCATCTCCATGAACAG 58.194 50.000 0.00 0.00 30.57 3.16
2064 2152 3.120468 TCTCCCATCTCCATGAACAGA 57.880 47.619 0.00 0.00 30.57 3.41
2065 2153 2.768527 TCTCCCATCTCCATGAACAGAC 59.231 50.000 0.00 0.00 30.57 3.51
2066 2154 2.502947 CTCCCATCTCCATGAACAGACA 59.497 50.000 0.00 0.00 30.57 3.41
2067 2155 2.237143 TCCCATCTCCATGAACAGACAC 59.763 50.000 0.00 0.00 30.57 3.67
2068 2156 2.274437 CCATCTCCATGAACAGACACG 58.726 52.381 0.00 0.00 30.57 4.49
2069 2157 2.354103 CCATCTCCATGAACAGACACGT 60.354 50.000 0.00 0.00 30.57 4.49
2070 2158 2.724977 TCTCCATGAACAGACACGTC 57.275 50.000 0.00 0.00 0.00 4.34
2071 2159 2.239400 TCTCCATGAACAGACACGTCT 58.761 47.619 0.00 0.00 41.37 4.18
2072 2160 2.628178 TCTCCATGAACAGACACGTCTT 59.372 45.455 0.00 0.00 37.98 3.01
2073 2161 2.989840 CTCCATGAACAGACACGTCTTC 59.010 50.000 0.00 0.00 37.98 2.87
2074 2162 2.628178 TCCATGAACAGACACGTCTTCT 59.372 45.455 0.00 0.00 37.98 2.85
2075 2163 2.989840 CCATGAACAGACACGTCTTCTC 59.010 50.000 0.00 0.00 37.98 2.87
2076 2164 3.305676 CCATGAACAGACACGTCTTCTCT 60.306 47.826 0.00 0.00 37.98 3.10
2077 2165 4.302455 CATGAACAGACACGTCTTCTCTT 58.698 43.478 0.00 0.00 37.98 2.85
2078 2166 3.706698 TGAACAGACACGTCTTCTCTTG 58.293 45.455 0.00 0.00 37.98 3.02
2079 2167 2.802787 ACAGACACGTCTTCTCTTGG 57.197 50.000 0.00 0.00 37.98 3.61
2080 2168 1.269831 ACAGACACGTCTTCTCTTGGC 60.270 52.381 0.00 0.00 37.98 4.52
2081 2169 0.039074 AGACACGTCTTCTCTTGGCG 60.039 55.000 0.00 0.00 36.31 5.69
2082 2170 0.318784 GACACGTCTTCTCTTGGCGT 60.319 55.000 0.00 0.00 36.13 5.68
2083 2171 0.318784 ACACGTCTTCTCTTGGCGTC 60.319 55.000 0.00 0.00 33.28 5.19
2084 2172 1.009389 CACGTCTTCTCTTGGCGTCC 61.009 60.000 0.00 0.00 33.28 4.79
2085 2173 1.801913 CGTCTTCTCTTGGCGTCCG 60.802 63.158 0.00 0.00 0.00 4.79
2086 2174 1.289380 GTCTTCTCTTGGCGTCCGT 59.711 57.895 0.00 0.00 0.00 4.69
2087 2175 0.319641 GTCTTCTCTTGGCGTCCGTT 60.320 55.000 0.00 0.00 0.00 4.44
2088 2176 0.038526 TCTTCTCTTGGCGTCCGTTC 60.039 55.000 0.00 0.00 0.00 3.95
2089 2177 1.005394 TTCTCTTGGCGTCCGTTCC 60.005 57.895 0.00 0.00 0.00 3.62
2090 2178 2.434359 CTCTTGGCGTCCGTTCCC 60.434 66.667 0.00 0.00 0.00 3.97
2091 2179 2.920912 TCTTGGCGTCCGTTCCCT 60.921 61.111 0.00 0.00 0.00 4.20
2092 2180 2.032071 CTTGGCGTCCGTTCCCTT 59.968 61.111 0.00 0.00 0.00 3.95
2093 2181 1.599797 CTTGGCGTCCGTTCCCTTT 60.600 57.895 0.00 0.00 0.00 3.11
2094 2182 1.852067 CTTGGCGTCCGTTCCCTTTG 61.852 60.000 0.00 0.00 0.00 2.77
2095 2183 2.281276 GGCGTCCGTTCCCTTTGT 60.281 61.111 0.00 0.00 0.00 2.83
2096 2184 1.004679 GGCGTCCGTTCCCTTTGTA 60.005 57.895 0.00 0.00 0.00 2.41
2097 2185 0.392060 GGCGTCCGTTCCCTTTGTAT 60.392 55.000 0.00 0.00 0.00 2.29
2098 2186 1.134729 GGCGTCCGTTCCCTTTGTATA 60.135 52.381 0.00 0.00 0.00 1.47
2099 2187 2.620242 GCGTCCGTTCCCTTTGTATAA 58.380 47.619 0.00 0.00 0.00 0.98
2100 2188 3.002102 GCGTCCGTTCCCTTTGTATAAA 58.998 45.455 0.00 0.00 0.00 1.40
2101 2189 3.624410 GCGTCCGTTCCCTTTGTATAAAT 59.376 43.478 0.00 0.00 0.00 1.40
2102 2190 4.495184 GCGTCCGTTCCCTTTGTATAAATG 60.495 45.833 0.00 0.00 0.00 2.32
2103 2191 4.632688 CGTCCGTTCCCTTTGTATAAATGT 59.367 41.667 0.00 0.00 0.00 2.71
2104 2192 5.446741 CGTCCGTTCCCTTTGTATAAATGTG 60.447 44.000 0.00 0.00 0.00 3.21
2105 2193 5.413523 GTCCGTTCCCTTTGTATAAATGTGT 59.586 40.000 0.00 0.00 0.00 3.72
2106 2194 6.005198 TCCGTTCCCTTTGTATAAATGTGTT 58.995 36.000 0.00 0.00 0.00 3.32
2107 2195 6.072397 TCCGTTCCCTTTGTATAAATGTGTTG 60.072 38.462 0.00 0.00 0.00 3.33
2108 2196 6.072397 CCGTTCCCTTTGTATAAATGTGTTGA 60.072 38.462 0.00 0.00 0.00 3.18
2109 2197 7.362574 CCGTTCCCTTTGTATAAATGTGTTGAT 60.363 37.037 0.00 0.00 0.00 2.57
2110 2198 7.696453 CGTTCCCTTTGTATAAATGTGTTGATC 59.304 37.037 0.00 0.00 0.00 2.92
2111 2199 8.519526 GTTCCCTTTGTATAAATGTGTTGATCA 58.480 33.333 0.00 0.00 0.00 2.92
2112 2200 8.821686 TCCCTTTGTATAAATGTGTTGATCAT 57.178 30.769 0.00 0.00 0.00 2.45
2113 2201 8.902806 TCCCTTTGTATAAATGTGTTGATCATC 58.097 33.333 0.00 0.00 0.00 2.92
2114 2202 8.685427 CCCTTTGTATAAATGTGTTGATCATCA 58.315 33.333 2.22 2.22 0.00 3.07
2127 2215 9.889128 TGTGTTGATCATCAATAGAATAGAACA 57.111 29.630 2.67 0.00 38.79 3.18
2156 2244 6.153212 CGATCAATTCGTACTTTCACAAGT 57.847 37.500 0.00 0.00 41.66 3.16
2157 2245 6.590357 CGATCAATTCGTACTTTCACAAGTT 58.410 36.000 0.00 0.00 40.53 2.66
2158 2246 7.726079 CGATCAATTCGTACTTTCACAAGTTA 58.274 34.615 0.00 0.00 40.53 2.24
2159 2247 8.380644 CGATCAATTCGTACTTTCACAAGTTAT 58.619 33.333 0.00 0.00 40.53 1.89
2160 2248 9.690434 GATCAATTCGTACTTTCACAAGTTATC 57.310 33.333 0.00 0.00 40.66 1.75
2161 2249 8.596271 TCAATTCGTACTTTCACAAGTTATCA 57.404 30.769 0.00 0.00 40.66 2.15
2162 2250 8.708742 TCAATTCGTACTTTCACAAGTTATCAG 58.291 33.333 0.00 0.00 40.66 2.90
2163 2251 6.462073 TTCGTACTTTCACAAGTTATCAGC 57.538 37.500 0.00 0.00 40.66 4.26
2164 2252 5.534407 TCGTACTTTCACAAGTTATCAGCA 58.466 37.500 0.00 0.00 40.66 4.41
2165 2253 5.404366 TCGTACTTTCACAAGTTATCAGCAC 59.596 40.000 0.00 0.00 40.66 4.40
2166 2254 5.405571 CGTACTTTCACAAGTTATCAGCACT 59.594 40.000 0.00 0.00 40.66 4.40
2167 2255 6.073765 CGTACTTTCACAAGTTATCAGCACTT 60.074 38.462 0.00 0.00 40.66 3.16
2168 2256 6.305693 ACTTTCACAAGTTATCAGCACTTC 57.694 37.500 0.00 0.00 40.66 3.01
2169 2257 4.990543 TTCACAAGTTATCAGCACTTCG 57.009 40.909 0.00 0.00 31.83 3.79
2170 2258 4.251543 TCACAAGTTATCAGCACTTCGA 57.748 40.909 0.00 0.00 31.83 3.71
2171 2259 3.987868 TCACAAGTTATCAGCACTTCGAC 59.012 43.478 0.00 0.00 31.83 4.20
2172 2260 3.990469 CACAAGTTATCAGCACTTCGACT 59.010 43.478 0.00 0.00 31.83 4.18
2173 2261 5.048294 TCACAAGTTATCAGCACTTCGACTA 60.048 40.000 0.00 0.00 31.83 2.59
2174 2262 5.807520 CACAAGTTATCAGCACTTCGACTAT 59.192 40.000 0.00 0.00 31.83 2.12
2175 2263 5.807520 ACAAGTTATCAGCACTTCGACTATG 59.192 40.000 0.00 0.00 31.83 2.23
2176 2264 5.584253 AGTTATCAGCACTTCGACTATGT 57.416 39.130 0.00 0.00 0.00 2.29
2177 2265 5.583495 AGTTATCAGCACTTCGACTATGTC 58.417 41.667 0.00 0.00 0.00 3.06
2192 2280 5.786401 ACTATGTCGAAAGAGCAAATCAC 57.214 39.130 0.00 0.00 43.49 3.06
2193 2281 3.729526 ATGTCGAAAGAGCAAATCACG 57.270 42.857 0.00 0.00 43.49 4.35
2194 2282 1.194547 TGTCGAAAGAGCAAATCACGC 59.805 47.619 0.00 0.00 43.49 5.34
2195 2283 0.796312 TCGAAAGAGCAAATCACGCC 59.204 50.000 0.00 0.00 34.84 5.68
2196 2284 0.519175 CGAAAGAGCAAATCACGCCG 60.519 55.000 0.00 0.00 0.00 6.46
2197 2285 0.179189 GAAAGAGCAAATCACGCCGG 60.179 55.000 0.00 0.00 0.00 6.13
2198 2286 0.889186 AAAGAGCAAATCACGCCGGT 60.889 50.000 1.90 0.00 0.00 5.28
2199 2287 1.577328 AAGAGCAAATCACGCCGGTG 61.577 55.000 14.93 14.93 45.78 4.94
2200 2288 2.281484 AGCAAATCACGCCGGTGT 60.281 55.556 16.69 16.69 44.68 4.16
2201 2289 2.175811 GCAAATCACGCCGGTGTC 59.824 61.111 20.00 1.43 44.68 3.67
2202 2290 2.612567 GCAAATCACGCCGGTGTCA 61.613 57.895 20.00 5.67 44.68 3.58
2203 2291 1.497278 CAAATCACGCCGGTGTCAG 59.503 57.895 20.00 8.59 44.68 3.51
2204 2292 1.070786 AAATCACGCCGGTGTCAGT 59.929 52.632 20.00 0.00 44.68 3.41
2205 2293 0.949105 AAATCACGCCGGTGTCAGTC 60.949 55.000 20.00 0.00 44.68 3.51
2206 2294 3.626680 ATCACGCCGGTGTCAGTCG 62.627 63.158 20.00 6.91 44.68 4.18
2213 2301 2.029964 GGTGTCAGTCGCCGGAAA 59.970 61.111 5.05 0.00 36.95 3.13
2214 2302 1.595929 GGTGTCAGTCGCCGGAAAA 60.596 57.895 5.05 0.00 36.95 2.29
2215 2303 1.161563 GGTGTCAGTCGCCGGAAAAA 61.162 55.000 5.05 0.00 36.95 1.94
2216 2304 0.234884 GTGTCAGTCGCCGGAAAAAG 59.765 55.000 5.05 0.00 0.00 2.27
2217 2305 1.206831 GTCAGTCGCCGGAAAAAGC 59.793 57.895 5.05 0.00 0.00 3.51
2218 2306 1.227704 TCAGTCGCCGGAAAAAGCA 60.228 52.632 5.05 0.00 0.00 3.91
2219 2307 0.816018 TCAGTCGCCGGAAAAAGCAA 60.816 50.000 5.05 0.00 0.00 3.91
2220 2308 0.030101 CAGTCGCCGGAAAAAGCAAA 59.970 50.000 5.05 0.00 0.00 3.68
2221 2309 0.030235 AGTCGCCGGAAAAAGCAAAC 59.970 50.000 5.05 0.00 0.00 2.93
2222 2310 0.030235 GTCGCCGGAAAAAGCAAACT 59.970 50.000 5.05 0.00 0.00 2.66
2223 2311 1.264826 GTCGCCGGAAAAAGCAAACTA 59.735 47.619 5.05 0.00 0.00 2.24
2224 2312 1.533731 TCGCCGGAAAAAGCAAACTAG 59.466 47.619 5.05 0.00 0.00 2.57
2225 2313 1.533731 CGCCGGAAAAAGCAAACTAGA 59.466 47.619 5.05 0.00 0.00 2.43
2226 2314 2.412847 CGCCGGAAAAAGCAAACTAGAG 60.413 50.000 5.05 0.00 0.00 2.43
2227 2315 2.095212 GCCGGAAAAAGCAAACTAGAGG 60.095 50.000 5.05 0.00 0.00 3.69
2228 2316 2.488153 CCGGAAAAAGCAAACTAGAGGG 59.512 50.000 0.00 0.00 0.00 4.30
2229 2317 3.408634 CGGAAAAAGCAAACTAGAGGGA 58.591 45.455 0.00 0.00 0.00 4.20
2230 2318 3.818773 CGGAAAAAGCAAACTAGAGGGAA 59.181 43.478 0.00 0.00 0.00 3.97
2231 2319 4.277423 CGGAAAAAGCAAACTAGAGGGAAA 59.723 41.667 0.00 0.00 0.00 3.13
2232 2320 5.562890 CGGAAAAAGCAAACTAGAGGGAAAG 60.563 44.000 0.00 0.00 0.00 2.62
2233 2321 5.535030 GGAAAAAGCAAACTAGAGGGAAAGA 59.465 40.000 0.00 0.00 0.00 2.52
2234 2322 6.040504 GGAAAAAGCAAACTAGAGGGAAAGAA 59.959 38.462 0.00 0.00 0.00 2.52
2235 2323 7.417456 GGAAAAAGCAAACTAGAGGGAAAGAAA 60.417 37.037 0.00 0.00 0.00 2.52
2236 2324 7.603180 AAAAGCAAACTAGAGGGAAAGAAAT 57.397 32.000 0.00 0.00 0.00 2.17
2237 2325 6.581171 AAGCAAACTAGAGGGAAAGAAATG 57.419 37.500 0.00 0.00 0.00 2.32
2238 2326 5.880901 AGCAAACTAGAGGGAAAGAAATGA 58.119 37.500 0.00 0.00 0.00 2.57
2239 2327 5.942826 AGCAAACTAGAGGGAAAGAAATGAG 59.057 40.000 0.00 0.00 0.00 2.90
2240 2328 5.940470 GCAAACTAGAGGGAAAGAAATGAGA 59.060 40.000 0.00 0.00 0.00 3.27
2241 2329 6.431234 GCAAACTAGAGGGAAAGAAATGAGAA 59.569 38.462 0.00 0.00 0.00 2.87
2242 2330 7.361628 GCAAACTAGAGGGAAAGAAATGAGAAG 60.362 40.741 0.00 0.00 0.00 2.85
2243 2331 7.560796 AACTAGAGGGAAAGAAATGAGAAGA 57.439 36.000 0.00 0.00 0.00 2.87
2244 2332 7.560796 ACTAGAGGGAAAGAAATGAGAAGAA 57.439 36.000 0.00 0.00 0.00 2.52
2245 2333 7.978925 ACTAGAGGGAAAGAAATGAGAAGAAA 58.021 34.615 0.00 0.00 0.00 2.52
2246 2334 8.440771 ACTAGAGGGAAAGAAATGAGAAGAAAA 58.559 33.333 0.00 0.00 0.00 2.29
2247 2335 7.517614 AGAGGGAAAGAAATGAGAAGAAAAC 57.482 36.000 0.00 0.00 0.00 2.43
2248 2336 7.293828 AGAGGGAAAGAAATGAGAAGAAAACT 58.706 34.615 0.00 0.00 0.00 2.66
2249 2337 8.440771 AGAGGGAAAGAAATGAGAAGAAAACTA 58.559 33.333 0.00 0.00 0.00 2.24
2250 2338 9.237187 GAGGGAAAGAAATGAGAAGAAAACTAT 57.763 33.333 0.00 0.00 0.00 2.12
2251 2339 9.018582 AGGGAAAGAAATGAGAAGAAAACTATG 57.981 33.333 0.00 0.00 0.00 2.23
2252 2340 9.014297 GGGAAAGAAATGAGAAGAAAACTATGA 57.986 33.333 0.00 0.00 0.00 2.15
2261 2349 9.784531 ATGAGAAGAAAACTATGAGAAACAAGA 57.215 29.630 0.00 0.00 0.00 3.02
2262 2350 9.613428 TGAGAAGAAAACTATGAGAAACAAGAA 57.387 29.630 0.00 0.00 0.00 2.52
2264 2352 8.563732 AGAAGAAAACTATGAGAAACAAGAAGC 58.436 33.333 0.00 0.00 0.00 3.86
2265 2353 7.807977 AGAAAACTATGAGAAACAAGAAGCA 57.192 32.000 0.00 0.00 0.00 3.91
2266 2354 8.225603 AGAAAACTATGAGAAACAAGAAGCAA 57.774 30.769 0.00 0.00 0.00 3.91
2267 2355 8.854117 AGAAAACTATGAGAAACAAGAAGCAAT 58.146 29.630 0.00 0.00 0.00 3.56
2268 2356 9.122613 GAAAACTATGAGAAACAAGAAGCAATC 57.877 33.333 0.00 0.00 0.00 2.67
2269 2357 7.750229 AACTATGAGAAACAAGAAGCAATCA 57.250 32.000 0.00 0.00 0.00 2.57
2270 2358 7.750229 ACTATGAGAAACAAGAAGCAATCAA 57.250 32.000 0.00 0.00 0.00 2.57
2271 2359 8.169977 ACTATGAGAAACAAGAAGCAATCAAA 57.830 30.769 0.00 0.00 0.00 2.69
2272 2360 8.800332 ACTATGAGAAACAAGAAGCAATCAAAT 58.200 29.630 0.00 0.00 0.00 2.32
2273 2361 7.884816 ATGAGAAACAAGAAGCAATCAAATG 57.115 32.000 0.00 0.00 0.00 2.32
2274 2362 6.218019 TGAGAAACAAGAAGCAATCAAATGG 58.782 36.000 0.00 0.00 0.00 3.16
2275 2363 6.040729 TGAGAAACAAGAAGCAATCAAATGGA 59.959 34.615 0.00 0.00 0.00 3.41
2276 2364 6.453092 AGAAACAAGAAGCAATCAAATGGAG 58.547 36.000 0.00 0.00 0.00 3.86
2277 2365 4.796038 ACAAGAAGCAATCAAATGGAGG 57.204 40.909 0.00 0.00 0.00 4.30
2278 2366 4.410099 ACAAGAAGCAATCAAATGGAGGA 58.590 39.130 0.00 0.00 0.00 3.71
2279 2367 4.461781 ACAAGAAGCAATCAAATGGAGGAG 59.538 41.667 0.00 0.00 0.00 3.69
2280 2368 3.629087 AGAAGCAATCAAATGGAGGAGG 58.371 45.455 0.00 0.00 0.00 4.30
2281 2369 3.267812 AGAAGCAATCAAATGGAGGAGGA 59.732 43.478 0.00 0.00 0.00 3.71
2282 2370 3.744940 AGCAATCAAATGGAGGAGGAA 57.255 42.857 0.00 0.00 0.00 3.36
2283 2371 4.051661 AGCAATCAAATGGAGGAGGAAA 57.948 40.909 0.00 0.00 0.00 3.13
2284 2372 4.617593 AGCAATCAAATGGAGGAGGAAAT 58.382 39.130 0.00 0.00 0.00 2.17
2285 2373 5.028131 AGCAATCAAATGGAGGAGGAAATT 58.972 37.500 0.00 0.00 0.00 1.82
2286 2374 5.486419 AGCAATCAAATGGAGGAGGAAATTT 59.514 36.000 0.00 0.00 0.00 1.82
2287 2375 6.013119 AGCAATCAAATGGAGGAGGAAATTTT 60.013 34.615 0.00 0.00 0.00 1.82
2288 2376 6.656270 GCAATCAAATGGAGGAGGAAATTTTT 59.344 34.615 0.00 0.00 0.00 1.94
2306 2394 4.650972 TTTTTAGTGGATAGTGGTGCCT 57.349 40.909 0.00 0.00 0.00 4.75
2307 2395 3.906720 TTTAGTGGATAGTGGTGCCTC 57.093 47.619 0.00 0.00 0.00 4.70
2308 2396 2.848678 TAGTGGATAGTGGTGCCTCT 57.151 50.000 0.00 0.00 0.00 3.69
2309 2397 2.848678 AGTGGATAGTGGTGCCTCTA 57.151 50.000 2.94 2.94 0.00 2.43
2310 2398 3.116096 AGTGGATAGTGGTGCCTCTAA 57.884 47.619 4.41 0.00 0.00 2.10
2311 2399 2.766828 AGTGGATAGTGGTGCCTCTAAC 59.233 50.000 4.41 2.45 0.00 2.34
2312 2400 2.500098 GTGGATAGTGGTGCCTCTAACA 59.500 50.000 4.41 4.68 0.00 2.41
2313 2401 2.500098 TGGATAGTGGTGCCTCTAACAC 59.500 50.000 4.41 0.00 37.31 3.32
2314 2402 2.500098 GGATAGTGGTGCCTCTAACACA 59.500 50.000 4.41 0.00 39.87 3.72
2315 2403 3.055385 GGATAGTGGTGCCTCTAACACAA 60.055 47.826 4.41 0.00 39.87 3.33
2316 2404 4.384208 GGATAGTGGTGCCTCTAACACAAT 60.384 45.833 4.41 0.00 39.87 2.71
2317 2405 3.508845 AGTGGTGCCTCTAACACAATT 57.491 42.857 0.00 0.00 39.87 2.32
2318 2406 3.412386 AGTGGTGCCTCTAACACAATTC 58.588 45.455 0.00 0.00 39.87 2.17
2319 2407 3.073062 AGTGGTGCCTCTAACACAATTCT 59.927 43.478 0.00 0.00 39.87 2.40
2320 2408 4.286032 AGTGGTGCCTCTAACACAATTCTA 59.714 41.667 0.00 0.00 39.87 2.10
2321 2409 4.392138 GTGGTGCCTCTAACACAATTCTAC 59.608 45.833 0.00 0.00 39.87 2.59
2322 2410 3.617263 GGTGCCTCTAACACAATTCTACG 59.383 47.826 0.00 0.00 39.87 3.51
2323 2411 3.617263 GTGCCTCTAACACAATTCTACGG 59.383 47.826 0.00 0.00 37.96 4.02
2324 2412 3.195661 GCCTCTAACACAATTCTACGGG 58.804 50.000 0.00 0.00 0.00 5.28
2325 2413 3.118884 GCCTCTAACACAATTCTACGGGA 60.119 47.826 0.00 0.00 0.00 5.14
2326 2414 4.683832 CCTCTAACACAATTCTACGGGAG 58.316 47.826 0.00 0.00 0.00 4.30
2327 2415 4.441634 CCTCTAACACAATTCTACGGGAGG 60.442 50.000 0.00 0.00 0.00 4.30
2328 2416 4.091549 TCTAACACAATTCTACGGGAGGT 58.908 43.478 0.00 0.00 0.00 3.85
2329 2417 3.782656 AACACAATTCTACGGGAGGTT 57.217 42.857 0.00 0.00 0.00 3.50
2330 2418 4.895668 AACACAATTCTACGGGAGGTTA 57.104 40.909 0.00 0.00 0.00 2.85
2331 2419 4.895668 ACACAATTCTACGGGAGGTTAA 57.104 40.909 0.00 0.00 0.00 2.01
2332 2420 5.231702 ACACAATTCTACGGGAGGTTAAA 57.768 39.130 0.00 0.00 0.00 1.52
2333 2421 5.812286 ACACAATTCTACGGGAGGTTAAAT 58.188 37.500 0.00 0.00 0.00 1.40
2334 2422 6.949715 ACACAATTCTACGGGAGGTTAAATA 58.050 36.000 0.00 0.00 0.00 1.40
2335 2423 6.820152 ACACAATTCTACGGGAGGTTAAATAC 59.180 38.462 0.00 0.00 0.00 1.89
2336 2424 7.046033 CACAATTCTACGGGAGGTTAAATACT 58.954 38.462 0.00 0.00 0.00 2.12
2337 2425 7.551617 CACAATTCTACGGGAGGTTAAATACTT 59.448 37.037 0.00 0.00 0.00 2.24
2338 2426 7.767659 ACAATTCTACGGGAGGTTAAATACTTC 59.232 37.037 0.00 0.00 32.34 3.01
2346 2434 5.975282 GGAGGTTAAATACTTCCGAAGTCT 58.025 41.667 17.13 5.20 42.41 3.24
2347 2435 7.105241 GGAGGTTAAATACTTCCGAAGTCTA 57.895 40.000 17.13 1.56 42.41 2.59
2348 2436 7.550712 GGAGGTTAAATACTTCCGAAGTCTAA 58.449 38.462 17.13 10.62 42.41 2.10
2349 2437 8.037166 GGAGGTTAAATACTTCCGAAGTCTAAA 58.963 37.037 17.13 0.44 42.41 1.85
2350 2438 9.428097 GAGGTTAAATACTTCCGAAGTCTAAAA 57.572 33.333 17.13 6.10 41.77 1.52
2351 2439 9.783081 AGGTTAAATACTTCCGAAGTCTAAAAA 57.217 29.630 17.13 0.00 41.77 1.94
2373 2461 7.981102 AAAAGAGTAAGGGAAGTGTTATGAC 57.019 36.000 0.00 0.00 0.00 3.06
2374 2462 6.681729 AAGAGTAAGGGAAGTGTTATGACA 57.318 37.500 0.00 0.00 0.00 3.58
2375 2463 6.681729 AGAGTAAGGGAAGTGTTATGACAA 57.318 37.500 0.00 0.00 37.57 3.18
2376 2464 7.259088 AGAGTAAGGGAAGTGTTATGACAAT 57.741 36.000 0.00 0.00 37.57 2.71
2377 2465 7.690256 AGAGTAAGGGAAGTGTTATGACAATT 58.310 34.615 2.70 2.70 45.77 2.32
2378 2466 7.607991 AGAGTAAGGGAAGTGTTATGACAATTG 59.392 37.037 8.12 3.24 43.42 2.32
2379 2467 5.982890 AAGGGAAGTGTTATGACAATTGG 57.017 39.130 8.12 0.00 43.42 3.16
2380 2468 4.998051 AGGGAAGTGTTATGACAATTGGT 58.002 39.130 8.12 0.00 43.42 3.67
2381 2469 4.766891 AGGGAAGTGTTATGACAATTGGTG 59.233 41.667 8.12 0.00 43.42 4.17
2382 2470 4.082245 GGGAAGTGTTATGACAATTGGTGG 60.082 45.833 8.12 0.00 43.42 4.61
2383 2471 4.522789 GGAAGTGTTATGACAATTGGTGGT 59.477 41.667 8.12 0.00 43.42 4.16
2384 2472 5.335661 GGAAGTGTTATGACAATTGGTGGTC 60.336 44.000 8.12 0.00 43.42 4.02
2385 2473 3.751175 AGTGTTATGACAATTGGTGGTCG 59.249 43.478 10.83 0.00 37.57 4.79
2386 2474 3.500680 GTGTTATGACAATTGGTGGTCGT 59.499 43.478 10.83 2.22 37.57 4.34
2387 2475 3.500299 TGTTATGACAATTGGTGGTCGTG 59.500 43.478 10.83 0.00 36.83 4.35
2388 2476 2.559698 ATGACAATTGGTGGTCGTGA 57.440 45.000 10.83 0.00 36.83 4.35
2389 2477 1.588674 TGACAATTGGTGGTCGTGAC 58.411 50.000 10.83 0.00 36.83 3.67
2390 2478 1.134371 TGACAATTGGTGGTCGTGACA 60.134 47.619 10.83 0.00 36.83 3.58
2391 2479 1.263217 GACAATTGGTGGTCGTGACAC 59.737 52.381 10.83 0.00 38.10 3.67
2392 2480 0.234625 CAATTGGTGGTCGTGACACG 59.765 55.000 21.88 21.88 44.19 4.49
2393 2481 0.882927 AATTGGTGGTCGTGACACGG 60.883 55.000 26.55 9.38 42.81 4.94
2394 2482 2.035237 ATTGGTGGTCGTGACACGGT 62.035 55.000 26.55 1.95 42.81 4.83
2395 2483 1.390383 TTGGTGGTCGTGACACGGTA 61.390 55.000 26.55 11.29 42.81 4.02
2396 2484 1.363443 GGTGGTCGTGACACGGTAA 59.637 57.895 26.55 10.31 42.81 2.85
2397 2485 0.037975 GGTGGTCGTGACACGGTAAT 60.038 55.000 26.55 0.00 42.81 1.89
2398 2486 1.606224 GGTGGTCGTGACACGGTAATT 60.606 52.381 26.55 0.00 42.81 1.40
2399 2487 1.458064 GTGGTCGTGACACGGTAATTG 59.542 52.381 26.55 0.00 42.81 2.32
2400 2488 1.068895 TGGTCGTGACACGGTAATTGT 59.931 47.619 26.55 0.00 42.81 2.71
2401 2489 2.137523 GGTCGTGACACGGTAATTGTT 58.862 47.619 26.55 0.00 42.81 2.83
2402 2490 2.096614 GGTCGTGACACGGTAATTGTTG 60.097 50.000 26.55 0.00 42.81 3.33
2403 2491 2.096614 GTCGTGACACGGTAATTGTTGG 60.097 50.000 26.55 0.00 42.81 3.77
2404 2492 1.868498 CGTGACACGGTAATTGTTGGT 59.132 47.619 20.26 0.00 38.08 3.67
2405 2493 2.288458 CGTGACACGGTAATTGTTGGTT 59.712 45.455 20.26 0.00 38.08 3.67
2406 2494 3.605231 CGTGACACGGTAATTGTTGGTTC 60.605 47.826 20.26 0.00 38.08 3.62
2407 2495 3.562557 GTGACACGGTAATTGTTGGTTCT 59.437 43.478 0.00 0.00 0.00 3.01
2408 2496 3.562141 TGACACGGTAATTGTTGGTTCTG 59.438 43.478 0.00 0.00 0.00 3.02
2409 2497 2.882137 ACACGGTAATTGTTGGTTCTGG 59.118 45.455 0.00 0.00 0.00 3.86
2410 2498 2.882137 CACGGTAATTGTTGGTTCTGGT 59.118 45.455 0.00 0.00 0.00 4.00
2411 2499 3.058501 CACGGTAATTGTTGGTTCTGGTC 60.059 47.826 0.00 0.00 0.00 4.02
2412 2500 3.142951 CGGTAATTGTTGGTTCTGGTCA 58.857 45.455 0.00 0.00 0.00 4.02
2413 2501 3.566322 CGGTAATTGTTGGTTCTGGTCAA 59.434 43.478 0.00 0.00 0.00 3.18
2414 2502 4.320202 CGGTAATTGTTGGTTCTGGTCAAG 60.320 45.833 0.00 0.00 0.00 3.02
2415 2503 3.733443 AATTGTTGGTTCTGGTCAAGC 57.267 42.857 0.00 0.00 0.00 4.01
2416 2504 1.398692 TTGTTGGTTCTGGTCAAGCC 58.601 50.000 0.00 0.00 37.90 4.35
2417 2505 0.257328 TGTTGGTTCTGGTCAAGCCA 59.743 50.000 0.00 0.00 46.95 4.75
2418 2506 0.668535 GTTGGTTCTGGTCAAGCCAC 59.331 55.000 0.00 0.00 43.61 5.01
2419 2507 0.257328 TTGGTTCTGGTCAAGCCACA 59.743 50.000 0.00 0.00 43.61 4.17
2420 2508 0.478072 TGGTTCTGGTCAAGCCACAT 59.522 50.000 0.00 0.00 43.61 3.21
2421 2509 1.133513 TGGTTCTGGTCAAGCCACATT 60.134 47.619 0.00 0.00 43.61 2.71
2422 2510 1.963515 GGTTCTGGTCAAGCCACATTT 59.036 47.619 0.00 0.00 43.61 2.32
2423 2511 3.153919 GGTTCTGGTCAAGCCACATTTA 58.846 45.455 0.00 0.00 43.61 1.40
2424 2512 3.057526 GGTTCTGGTCAAGCCACATTTAC 60.058 47.826 0.00 0.00 43.61 2.01
2425 2513 3.500448 TCTGGTCAAGCCACATTTACA 57.500 42.857 0.00 0.00 43.61 2.41
2426 2514 3.146066 TCTGGTCAAGCCACATTTACAC 58.854 45.455 0.00 0.00 43.61 2.90
2427 2515 3.149196 CTGGTCAAGCCACATTTACACT 58.851 45.455 0.00 0.00 43.61 3.55
2428 2516 3.146066 TGGTCAAGCCACATTTACACTC 58.854 45.455 0.00 0.00 43.61 3.51
2429 2517 2.488153 GGTCAAGCCACATTTACACTCC 59.512 50.000 0.00 0.00 37.17 3.85
2430 2518 3.412386 GTCAAGCCACATTTACACTCCT 58.588 45.455 0.00 0.00 0.00 3.69
2431 2519 3.189287 GTCAAGCCACATTTACACTCCTG 59.811 47.826 0.00 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
214 215 3.807538 GGAGGTAGTCGTCGCGCA 61.808 66.667 8.75 0.00 0.00 6.09
502 521 2.670592 TCGTCGTCTTCCTCGCCA 60.671 61.111 0.00 0.00 0.00 5.69
510 529 1.081108 GTCTGCTGCTCGTCGTCTT 60.081 57.895 0.00 0.00 0.00 3.01
579 605 4.271291 GGCGCAAATTAAACCAAACTTCAA 59.729 37.500 10.83 0.00 0.00 2.69
718 748 1.076549 CCAGCAGTTGGCCCCTTTA 59.923 57.895 0.00 0.00 46.50 1.85
719 749 2.203684 CCAGCAGTTGGCCCCTTT 60.204 61.111 0.00 0.00 46.50 3.11
931 961 0.760945 AAGGTGGAGAGGATAGGCGG 60.761 60.000 0.00 0.00 0.00 6.13
950 980 2.298446 CTCTTTCTCTGTGTGGCTGAGA 59.702 50.000 0.00 0.00 46.11 3.27
1458 1488 8.720562 AGATAATATGATATCAGCTCGATCTCG 58.279 37.037 11.78 0.00 35.22 4.04
1460 1490 9.013229 GGAGATAATATGATATCAGCTCGATCT 57.987 37.037 11.78 13.67 35.22 2.75
1502 1567 0.752658 CGGAGTATCTGGCCATGTCA 59.247 55.000 5.51 0.00 38.01 3.58
1508 1573 2.622064 ACAAATCGGAGTATCTGGCC 57.378 50.000 0.00 0.00 43.33 5.36
1518 1587 1.872388 TCGAGCACAAACAAATCGGA 58.128 45.000 0.00 0.00 34.29 4.55
1554 1623 8.398665 GGAGACATTATTACTTGACCAAATCAC 58.601 37.037 0.00 0.00 36.92 3.06
1557 1626 7.335627 TCGGAGACATTATTACTTGACCAAAT 58.664 34.615 0.00 0.00 0.00 2.32
1562 1631 8.762426 GGTAATTCGGAGACATTATTACTTGAC 58.238 37.037 0.00 0.00 34.32 3.18
1579 1648 6.368516 TCTTACGGTACAAAAAGGTAATTCGG 59.631 38.462 0.00 0.00 0.00 4.30
1638 1721 6.227522 TCAGGATTCATTTCAGTACGTTGAA 58.772 36.000 0.00 0.00 35.38 2.69
1641 1724 5.586243 CCATCAGGATTCATTTCAGTACGTT 59.414 40.000 0.00 0.00 36.89 3.99
1715 1801 5.885449 AATTCCTGGAAACCAACATTCAA 57.115 34.783 14.03 0.00 30.80 2.69
1721 1807 5.467035 TCATCAAATTCCTGGAAACCAAC 57.533 39.130 14.03 0.00 30.80 3.77
1722 1808 5.365025 TGTTCATCAAATTCCTGGAAACCAA 59.635 36.000 14.03 0.42 30.80 3.67
1723 1809 4.898265 TGTTCATCAAATTCCTGGAAACCA 59.102 37.500 14.03 0.00 0.00 3.67
1724 1810 5.467035 TGTTCATCAAATTCCTGGAAACC 57.533 39.130 14.03 0.00 0.00 3.27
1725 1811 6.928520 AGATGTTCATCAAATTCCTGGAAAC 58.071 36.000 14.03 5.01 0.00 2.78
1726 1812 7.543359 AAGATGTTCATCAAATTCCTGGAAA 57.457 32.000 14.03 0.00 0.00 3.13
1727 1813 7.122650 GGTAAGATGTTCATCAAATTCCTGGAA 59.877 37.037 12.26 12.26 0.00 3.53
1728 1814 6.603201 GGTAAGATGTTCATCAAATTCCTGGA 59.397 38.462 14.05 0.00 0.00 3.86
1729 1815 6.604795 AGGTAAGATGTTCATCAAATTCCTGG 59.395 38.462 14.05 0.00 0.00 4.45
1730 1816 7.478322 CAGGTAAGATGTTCATCAAATTCCTG 58.522 38.462 14.05 16.25 0.00 3.86
1731 1817 6.096001 GCAGGTAAGATGTTCATCAAATTCCT 59.904 38.462 14.05 10.59 0.00 3.36
1732 1818 6.268566 GCAGGTAAGATGTTCATCAAATTCC 58.731 40.000 14.05 8.97 0.00 3.01
1733 1819 5.967674 CGCAGGTAAGATGTTCATCAAATTC 59.032 40.000 14.05 1.84 0.00 2.17
1734 1820 5.883661 CGCAGGTAAGATGTTCATCAAATT 58.116 37.500 14.05 3.97 0.00 1.82
1735 1821 5.490139 CGCAGGTAAGATGTTCATCAAAT 57.510 39.130 14.05 4.02 0.00 2.32
1736 1822 4.944962 CGCAGGTAAGATGTTCATCAAA 57.055 40.909 14.05 0.43 0.00 2.69
1756 1842 6.312426 CCTATTATCTGCATAGAAGAAAGCCG 59.688 42.308 0.00 0.00 36.32 5.52
1758 1844 7.360776 GCACCTATTATCTGCATAGAAGAAAGC 60.361 40.741 0.00 0.00 36.32 3.51
1770 1858 4.988540 TCGTAACATGCACCTATTATCTGC 59.011 41.667 0.00 0.00 0.00 4.26
1788 1876 9.658475 CAAAACTCATATTGAAACAAGTCGTAA 57.342 29.630 0.00 0.00 0.00 3.18
1812 1900 2.844946 TGAGGAAATCGTGCAACTCAA 58.155 42.857 0.00 0.00 32.60 3.02
1813 1901 2.542020 TGAGGAAATCGTGCAACTCA 57.458 45.000 0.00 0.00 33.05 3.41
1814 1902 5.741388 ATAATGAGGAAATCGTGCAACTC 57.259 39.130 0.00 0.00 31.75 3.01
1815 1903 6.515272 AAATAATGAGGAAATCGTGCAACT 57.485 33.333 0.00 0.00 31.75 3.16
1816 1904 6.586082 ACAAAATAATGAGGAAATCGTGCAAC 59.414 34.615 0.00 0.00 0.00 4.17
1817 1905 6.686630 ACAAAATAATGAGGAAATCGTGCAA 58.313 32.000 0.00 0.00 0.00 4.08
1818 1906 6.266168 ACAAAATAATGAGGAAATCGTGCA 57.734 33.333 0.00 0.00 0.00 4.57
1845 1933 2.968675 AGCCTGAATCATTTTGCAAGC 58.031 42.857 0.00 0.00 0.00 4.01
1846 1934 4.110482 GCTAGCCTGAATCATTTTGCAAG 58.890 43.478 2.29 0.00 0.00 4.01
1847 1935 3.510753 TGCTAGCCTGAATCATTTTGCAA 59.489 39.130 13.29 0.00 0.00 4.08
1848 1936 3.090790 TGCTAGCCTGAATCATTTTGCA 58.909 40.909 13.29 0.00 0.00 4.08
1849 1937 3.490419 CCTGCTAGCCTGAATCATTTTGC 60.490 47.826 13.29 0.00 0.00 3.68
1850 1938 3.949754 TCCTGCTAGCCTGAATCATTTTG 59.050 43.478 13.29 0.00 0.00 2.44
1851 1939 4.240881 TCCTGCTAGCCTGAATCATTTT 57.759 40.909 13.29 0.00 0.00 1.82
1852 1940 3.939740 TCCTGCTAGCCTGAATCATTT 57.060 42.857 13.29 0.00 0.00 2.32
1853 1941 3.137913 ACATCCTGCTAGCCTGAATCATT 59.862 43.478 13.29 0.00 0.00 2.57
1854 1942 2.709934 ACATCCTGCTAGCCTGAATCAT 59.290 45.455 13.29 0.00 0.00 2.45
1855 1943 2.121948 ACATCCTGCTAGCCTGAATCA 58.878 47.619 13.29 0.00 0.00 2.57
1856 1944 2.926778 ACATCCTGCTAGCCTGAATC 57.073 50.000 13.29 0.00 0.00 2.52
1857 1945 3.285484 CAAACATCCTGCTAGCCTGAAT 58.715 45.455 13.29 0.00 0.00 2.57
1858 1946 2.040278 ACAAACATCCTGCTAGCCTGAA 59.960 45.455 13.29 0.00 0.00 3.02
1859 1947 1.630369 ACAAACATCCTGCTAGCCTGA 59.370 47.619 13.29 9.06 0.00 3.86
1860 1948 2.119801 ACAAACATCCTGCTAGCCTG 57.880 50.000 13.29 7.17 0.00 4.85
1861 1949 2.887151 AACAAACATCCTGCTAGCCT 57.113 45.000 13.29 0.00 0.00 4.58
1862 1950 3.947834 ACATAACAAACATCCTGCTAGCC 59.052 43.478 13.29 0.00 0.00 3.93
1863 1951 5.567138 AACATAACAAACATCCTGCTAGC 57.433 39.130 8.10 8.10 0.00 3.42
1864 1952 7.047891 TCCTAACATAACAAACATCCTGCTAG 58.952 38.462 0.00 0.00 0.00 3.42
1865 1953 6.953101 TCCTAACATAACAAACATCCTGCTA 58.047 36.000 0.00 0.00 0.00 3.49
1866 1954 5.815581 TCCTAACATAACAAACATCCTGCT 58.184 37.500 0.00 0.00 0.00 4.24
1867 1955 6.699575 ATCCTAACATAACAAACATCCTGC 57.300 37.500 0.00 0.00 0.00 4.85
1910 1998 8.603304 GCTAAATACAAGGAAGGATTATCCCTA 58.397 37.037 7.76 0.00 37.19 3.53
1911 1999 7.462590 GCTAAATACAAGGAAGGATTATCCCT 58.537 38.462 7.76 0.00 37.19 4.20
1912 2000 6.371825 CGCTAAATACAAGGAAGGATTATCCC 59.628 42.308 7.76 0.00 37.19 3.85
1913 2001 6.935208 ACGCTAAATACAAGGAAGGATTATCC 59.065 38.462 2.40 2.40 36.58 2.59
1914 2002 7.964604 ACGCTAAATACAAGGAAGGATTATC 57.035 36.000 0.00 0.00 0.00 1.75
1915 2003 7.597743 CGTACGCTAAATACAAGGAAGGATTAT 59.402 37.037 0.52 0.00 0.00 1.28
1916 2004 6.919662 CGTACGCTAAATACAAGGAAGGATTA 59.080 38.462 0.52 0.00 0.00 1.75
1917 2005 5.751990 CGTACGCTAAATACAAGGAAGGATT 59.248 40.000 0.52 0.00 0.00 3.01
1918 2006 5.287226 CGTACGCTAAATACAAGGAAGGAT 58.713 41.667 0.52 0.00 0.00 3.24
1919 2007 4.440525 CCGTACGCTAAATACAAGGAAGGA 60.441 45.833 10.49 0.00 0.00 3.36
1920 2008 3.800506 CCGTACGCTAAATACAAGGAAGG 59.199 47.826 10.49 0.00 0.00 3.46
1921 2009 4.427312 ACCGTACGCTAAATACAAGGAAG 58.573 43.478 10.49 0.00 0.00 3.46
1922 2010 4.454728 ACCGTACGCTAAATACAAGGAA 57.545 40.909 10.49 0.00 0.00 3.36
1923 2011 4.454728 AACCGTACGCTAAATACAAGGA 57.545 40.909 10.49 0.00 0.00 3.36
1924 2012 4.725737 GCAAACCGTACGCTAAATACAAGG 60.726 45.833 10.49 0.00 0.00 3.61
1925 2013 4.328667 GCAAACCGTACGCTAAATACAAG 58.671 43.478 10.49 0.00 0.00 3.16
1926 2014 3.124976 GGCAAACCGTACGCTAAATACAA 59.875 43.478 10.49 0.00 0.00 2.41
1927 2015 2.672381 GGCAAACCGTACGCTAAATACA 59.328 45.455 10.49 0.00 0.00 2.29
1928 2016 2.931969 AGGCAAACCGTACGCTAAATAC 59.068 45.455 10.49 0.00 42.76 1.89
1929 2017 3.189285 GAGGCAAACCGTACGCTAAATA 58.811 45.455 10.49 0.00 42.76 1.40
1930 2018 2.004733 GAGGCAAACCGTACGCTAAAT 58.995 47.619 10.49 0.00 42.76 1.40
1931 2019 1.431496 GAGGCAAACCGTACGCTAAA 58.569 50.000 10.49 0.00 42.76 1.85
1932 2020 0.390209 GGAGGCAAACCGTACGCTAA 60.390 55.000 10.49 0.00 42.76 3.09
1933 2021 1.216178 GGAGGCAAACCGTACGCTA 59.784 57.895 10.49 0.00 42.76 4.26
1934 2022 2.047560 GGAGGCAAACCGTACGCT 60.048 61.111 10.49 0.00 42.76 5.07
1935 2023 2.357760 TGGAGGCAAACCGTACGC 60.358 61.111 10.49 0.00 42.76 4.42
1936 2024 1.740296 CCTGGAGGCAAACCGTACG 60.740 63.158 8.69 8.69 42.76 3.67
1937 2025 4.296265 CCTGGAGGCAAACCGTAC 57.704 61.111 0.00 0.00 42.76 3.67
1954 2042 3.820164 GTACGACGCGACGGTTGC 61.820 66.667 31.73 14.02 37.61 4.17
1955 2043 3.517699 CGTACGACGCGACGGTTG 61.518 66.667 31.73 17.86 33.65 3.77
1964 2052 3.746409 GGCCCTAGCACGTACGACG 62.746 68.421 24.41 13.53 42.56 5.12
1965 2053 2.103736 GGCCCTAGCACGTACGAC 59.896 66.667 24.41 13.54 42.56 4.34
1966 2054 2.044650 AGGCCCTAGCACGTACGA 60.045 61.111 24.41 0.00 42.56 3.43
1967 2055 2.061182 GAGAGGCCCTAGCACGTACG 62.061 65.000 15.01 15.01 42.56 3.67
1968 2056 1.734748 GAGAGGCCCTAGCACGTAC 59.265 63.158 0.00 0.00 42.56 3.67
1969 2057 1.822613 CGAGAGGCCCTAGCACGTA 60.823 63.158 0.00 0.00 42.56 3.57
1970 2058 3.141488 CGAGAGGCCCTAGCACGT 61.141 66.667 0.00 0.00 42.56 4.49
1971 2059 2.829003 TCGAGAGGCCCTAGCACG 60.829 66.667 0.00 0.00 42.56 5.34
1972 2060 2.494530 CCTCGAGAGGCCCTAGCAC 61.495 68.421 15.71 0.00 42.44 4.40
1973 2061 2.123683 CCTCGAGAGGCCCTAGCA 60.124 66.667 15.71 0.00 42.44 3.49
1982 2070 2.202492 CGACGGTTGCCTCGAGAG 60.202 66.667 15.71 5.19 31.24 3.20
1983 2071 4.415332 GCGACGGTTGCCTCGAGA 62.415 66.667 15.71 0.00 31.24 4.04
1990 2078 3.820164 GTACGACGCGACGGTTGC 61.820 66.667 31.73 14.02 37.61 4.17
1991 2079 3.517699 CGTACGACGCGACGGTTG 61.518 66.667 31.73 17.86 33.65 3.77
2000 2088 3.746409 GGCCCTAGCACGTACGACG 62.746 68.421 24.41 13.53 42.56 5.12
2001 2089 2.103736 GGCCCTAGCACGTACGAC 59.896 66.667 24.41 13.54 42.56 4.34
2002 2090 2.044650 AGGCCCTAGCACGTACGA 60.045 61.111 24.41 0.00 42.56 3.43
2003 2091 2.061182 GAGAGGCCCTAGCACGTACG 62.061 65.000 15.01 15.01 42.56 3.67
2004 2092 1.734748 GAGAGGCCCTAGCACGTAC 59.265 63.158 0.00 0.00 42.56 3.67
2005 2093 1.822613 CGAGAGGCCCTAGCACGTA 60.823 63.158 0.00 0.00 42.56 3.57
2006 2094 3.141488 CGAGAGGCCCTAGCACGT 61.141 66.667 0.00 0.00 42.56 4.49
2007 2095 2.829003 TCGAGAGGCCCTAGCACG 60.829 66.667 0.00 0.00 42.56 5.34
2008 2096 2.494530 CCTCGAGAGGCCCTAGCAC 61.495 68.421 15.71 0.00 42.44 4.40
2009 2097 2.123683 CCTCGAGAGGCCCTAGCA 60.124 66.667 15.71 0.00 42.44 3.49
2023 2111 3.255379 GGACGCGACGATTGCCTC 61.255 66.667 15.93 0.00 0.00 4.70
2035 2123 2.586357 GATGGGAGAAGCGGACGC 60.586 66.667 8.91 8.91 42.33 5.19
2036 2124 1.066587 GAGATGGGAGAAGCGGACG 59.933 63.158 0.00 0.00 0.00 4.79
2037 2125 1.330655 TGGAGATGGGAGAAGCGGAC 61.331 60.000 0.00 0.00 0.00 4.79
2038 2126 0.399091 ATGGAGATGGGAGAAGCGGA 60.399 55.000 0.00 0.00 0.00 5.54
2039 2127 0.250209 CATGGAGATGGGAGAAGCGG 60.250 60.000 0.00 0.00 0.00 5.52
2040 2128 0.755079 TCATGGAGATGGGAGAAGCG 59.245 55.000 0.00 0.00 0.00 4.68
2041 2129 2.092753 TGTTCATGGAGATGGGAGAAGC 60.093 50.000 0.00 0.00 0.00 3.86
2042 2130 3.453717 TCTGTTCATGGAGATGGGAGAAG 59.546 47.826 0.00 0.00 0.00 2.85
2043 2131 3.198635 GTCTGTTCATGGAGATGGGAGAA 59.801 47.826 0.00 0.00 0.00 2.87
2044 2132 2.768527 GTCTGTTCATGGAGATGGGAGA 59.231 50.000 0.00 0.00 0.00 3.71
2045 2133 2.502947 TGTCTGTTCATGGAGATGGGAG 59.497 50.000 0.00 0.00 0.00 4.30
2046 2134 2.237143 GTGTCTGTTCATGGAGATGGGA 59.763 50.000 0.00 0.00 0.00 4.37
2047 2135 2.636830 GTGTCTGTTCATGGAGATGGG 58.363 52.381 0.00 0.00 0.00 4.00
2048 2136 2.274437 CGTGTCTGTTCATGGAGATGG 58.726 52.381 0.00 0.00 0.00 3.51
2049 2137 2.926200 GACGTGTCTGTTCATGGAGATG 59.074 50.000 0.00 0.00 0.00 2.90
2050 2138 2.828520 AGACGTGTCTGTTCATGGAGAT 59.171 45.455 0.86 0.00 38.75 2.75
2051 2139 2.239400 AGACGTGTCTGTTCATGGAGA 58.761 47.619 0.86 0.00 38.75 3.71
2052 2140 2.732412 AGACGTGTCTGTTCATGGAG 57.268 50.000 0.86 0.00 38.75 3.86
2053 2141 2.628178 AGAAGACGTGTCTGTTCATGGA 59.372 45.455 2.78 0.00 40.36 3.41
2054 2142 2.989840 GAGAAGACGTGTCTGTTCATGG 59.010 50.000 2.78 0.00 40.36 3.66
2055 2143 3.906998 AGAGAAGACGTGTCTGTTCATG 58.093 45.455 2.78 0.00 40.36 3.07
2056 2144 4.302455 CAAGAGAAGACGTGTCTGTTCAT 58.698 43.478 2.78 0.00 40.36 2.57
2057 2145 3.490933 CCAAGAGAAGACGTGTCTGTTCA 60.491 47.826 2.78 0.00 40.36 3.18
2058 2146 3.053455 CCAAGAGAAGACGTGTCTGTTC 58.947 50.000 2.78 4.82 40.36 3.18
2059 2147 2.803492 GCCAAGAGAAGACGTGTCTGTT 60.803 50.000 2.78 0.00 40.36 3.16
2060 2148 1.269831 GCCAAGAGAAGACGTGTCTGT 60.270 52.381 2.78 0.00 40.36 3.41
2061 2149 1.423395 GCCAAGAGAAGACGTGTCTG 58.577 55.000 2.78 0.00 40.36 3.51
2062 2150 0.039074 CGCCAAGAGAAGACGTGTCT 60.039 55.000 0.00 0.00 42.75 3.41
2063 2151 0.318784 ACGCCAAGAGAAGACGTGTC 60.319 55.000 0.00 0.00 35.33 3.67
2064 2152 0.318784 GACGCCAAGAGAAGACGTGT 60.319 55.000 0.00 0.00 37.05 4.49
2065 2153 1.009389 GGACGCCAAGAGAAGACGTG 61.009 60.000 0.00 0.00 37.05 4.49
2066 2154 1.289380 GGACGCCAAGAGAAGACGT 59.711 57.895 0.00 0.00 40.11 4.34
2067 2155 1.801913 CGGACGCCAAGAGAAGACG 60.802 63.158 0.00 0.00 0.00 4.18
2068 2156 0.319641 AACGGACGCCAAGAGAAGAC 60.320 55.000 0.00 0.00 0.00 3.01
2069 2157 0.038526 GAACGGACGCCAAGAGAAGA 60.039 55.000 0.00 0.00 0.00 2.87
2070 2158 1.014564 GGAACGGACGCCAAGAGAAG 61.015 60.000 0.00 0.00 0.00 2.85
2071 2159 1.005394 GGAACGGACGCCAAGAGAA 60.005 57.895 0.00 0.00 0.00 2.87
2072 2160 2.654877 GGAACGGACGCCAAGAGA 59.345 61.111 0.00 0.00 0.00 3.10
2073 2161 2.434359 GGGAACGGACGCCAAGAG 60.434 66.667 0.00 0.00 0.00 2.85
2074 2162 2.047213 AAAGGGAACGGACGCCAAGA 62.047 55.000 0.00 0.00 0.00 3.02
2075 2163 1.599797 AAAGGGAACGGACGCCAAG 60.600 57.895 0.00 0.00 0.00 3.61
2076 2164 1.894756 CAAAGGGAACGGACGCCAA 60.895 57.895 0.00 0.00 0.00 4.52
2077 2165 1.756408 TACAAAGGGAACGGACGCCA 61.756 55.000 0.00 0.00 0.00 5.69
2078 2166 0.392060 ATACAAAGGGAACGGACGCC 60.392 55.000 0.00 0.00 0.00 5.68
2079 2167 2.298411 TATACAAAGGGAACGGACGC 57.702 50.000 0.00 0.00 0.00 5.19
2080 2168 4.632688 ACATTTATACAAAGGGAACGGACG 59.367 41.667 0.00 0.00 29.70 4.79
2081 2169 5.413523 ACACATTTATACAAAGGGAACGGAC 59.586 40.000 0.00 0.00 29.70 4.79
2082 2170 5.562635 ACACATTTATACAAAGGGAACGGA 58.437 37.500 0.00 0.00 29.70 4.69
2083 2171 5.890424 ACACATTTATACAAAGGGAACGG 57.110 39.130 0.00 0.00 29.70 4.44
2084 2172 6.904498 TCAACACATTTATACAAAGGGAACG 58.096 36.000 0.00 0.00 29.70 3.95
2085 2173 8.519526 TGATCAACACATTTATACAAAGGGAAC 58.480 33.333 0.00 0.00 29.70 3.62
2086 2174 8.642935 TGATCAACACATTTATACAAAGGGAA 57.357 30.769 0.00 0.00 29.70 3.97
2087 2175 8.821686 ATGATCAACACATTTATACAAAGGGA 57.178 30.769 0.00 0.00 29.70 4.20
2088 2176 8.685427 TGATGATCAACACATTTATACAAAGGG 58.315 33.333 0.00 0.00 29.70 3.95
2101 2189 9.889128 TGTTCTATTCTATTGATGATCAACACA 57.111 29.630 10.45 1.01 39.45 3.72
2131 2219 7.042321 AACTTGTGAAAGTACGAATTGATCGAA 60.042 33.333 4.70 0.00 42.59 3.71
2132 2220 6.422701 AACTTGTGAAAGTACGAATTGATCGA 59.577 34.615 4.70 0.00 42.59 3.59
2133 2221 6.590357 AACTTGTGAAAGTACGAATTGATCG 58.410 36.000 0.00 0.00 44.00 3.69
2134 2222 9.690434 GATAACTTGTGAAAGTACGAATTGATC 57.310 33.333 0.00 0.00 31.72 2.92
2135 2223 9.214957 TGATAACTTGTGAAAGTACGAATTGAT 57.785 29.630 0.00 0.00 31.72 2.57
2136 2224 8.596271 TGATAACTTGTGAAAGTACGAATTGA 57.404 30.769 0.00 0.00 31.72 2.57
2137 2225 7.478667 GCTGATAACTTGTGAAAGTACGAATTG 59.521 37.037 0.00 0.00 31.72 2.32
2138 2226 7.172532 TGCTGATAACTTGTGAAAGTACGAATT 59.827 33.333 0.00 0.00 31.72 2.17
2139 2227 6.649141 TGCTGATAACTTGTGAAAGTACGAAT 59.351 34.615 0.00 0.00 31.72 3.34
2140 2228 5.986741 TGCTGATAACTTGTGAAAGTACGAA 59.013 36.000 0.00 0.00 31.72 3.85
2141 2229 5.404366 GTGCTGATAACTTGTGAAAGTACGA 59.596 40.000 0.00 0.00 31.72 3.43
2142 2230 5.405571 AGTGCTGATAACTTGTGAAAGTACG 59.594 40.000 0.00 0.00 31.72 3.67
2143 2231 6.787085 AGTGCTGATAACTTGTGAAAGTAC 57.213 37.500 0.00 0.00 31.72 2.73
2144 2232 6.145534 CGAAGTGCTGATAACTTGTGAAAGTA 59.854 38.462 0.00 0.00 37.98 2.24
2145 2233 5.050091 CGAAGTGCTGATAACTTGTGAAAGT 60.050 40.000 0.00 0.00 37.98 2.66
2146 2234 5.177511 TCGAAGTGCTGATAACTTGTGAAAG 59.822 40.000 0.00 0.00 37.98 2.62
2147 2235 5.050363 GTCGAAGTGCTGATAACTTGTGAAA 60.050 40.000 0.00 0.00 37.98 2.69
2148 2236 4.447724 GTCGAAGTGCTGATAACTTGTGAA 59.552 41.667 0.00 0.00 37.98 3.18
2149 2237 3.987868 GTCGAAGTGCTGATAACTTGTGA 59.012 43.478 0.00 0.00 37.98 3.58
2150 2238 3.990469 AGTCGAAGTGCTGATAACTTGTG 59.010 43.478 0.00 0.00 37.98 3.33
2151 2239 4.258702 AGTCGAAGTGCTGATAACTTGT 57.741 40.909 0.00 0.00 37.98 3.16
2152 2240 5.807520 ACATAGTCGAAGTGCTGATAACTTG 59.192 40.000 0.00 0.00 37.98 3.16
2153 2241 5.967088 ACATAGTCGAAGTGCTGATAACTT 58.033 37.500 0.00 0.00 40.54 2.66
2154 2242 5.583495 GACATAGTCGAAGTGCTGATAACT 58.417 41.667 0.00 0.00 0.00 2.24
2155 2243 5.874892 GACATAGTCGAAGTGCTGATAAC 57.125 43.478 0.00 0.00 0.00 1.89
2169 2257 5.499334 CGTGATTTGCTCTTTCGACATAGTC 60.499 44.000 0.00 0.00 0.00 2.59
2170 2258 4.327357 CGTGATTTGCTCTTTCGACATAGT 59.673 41.667 0.00 0.00 0.00 2.12
2171 2259 4.780324 GCGTGATTTGCTCTTTCGACATAG 60.780 45.833 0.00 0.00 0.00 2.23
2172 2260 3.062099 GCGTGATTTGCTCTTTCGACATA 59.938 43.478 0.00 0.00 0.00 2.29
2173 2261 2.159653 GCGTGATTTGCTCTTTCGACAT 60.160 45.455 0.00 0.00 0.00 3.06
2174 2262 1.194547 GCGTGATTTGCTCTTTCGACA 59.805 47.619 0.00 0.00 0.00 4.35
2175 2263 1.464189 GGCGTGATTTGCTCTTTCGAC 60.464 52.381 0.00 0.00 0.00 4.20
2176 2264 0.796312 GGCGTGATTTGCTCTTTCGA 59.204 50.000 0.00 0.00 0.00 3.71
2177 2265 0.519175 CGGCGTGATTTGCTCTTTCG 60.519 55.000 0.00 0.00 0.00 3.46
2178 2266 0.179189 CCGGCGTGATTTGCTCTTTC 60.179 55.000 6.01 0.00 0.00 2.62
2179 2267 0.889186 ACCGGCGTGATTTGCTCTTT 60.889 50.000 6.01 0.00 0.00 2.52
2180 2268 1.302511 ACCGGCGTGATTTGCTCTT 60.303 52.632 6.01 0.00 0.00 2.85
2181 2269 2.034879 CACCGGCGTGATTTGCTCT 61.035 57.895 6.01 0.00 43.14 4.09
2182 2270 2.240612 GACACCGGCGTGATTTGCTC 62.241 60.000 0.00 0.00 43.14 4.26
2183 2271 2.281484 ACACCGGCGTGATTTGCT 60.281 55.556 6.01 0.00 43.14 3.91
2184 2272 2.175811 GACACCGGCGTGATTTGC 59.824 61.111 0.00 0.00 43.14 3.68
2185 2273 1.227999 ACTGACACCGGCGTGATTTG 61.228 55.000 0.00 0.00 43.14 2.32
2186 2274 0.949105 GACTGACACCGGCGTGATTT 60.949 55.000 0.00 0.00 43.14 2.17
2187 2275 1.374252 GACTGACACCGGCGTGATT 60.374 57.895 0.00 0.00 43.14 2.57
2188 2276 2.261671 GACTGACACCGGCGTGAT 59.738 61.111 0.00 0.00 43.14 3.06
2189 2277 4.337060 CGACTGACACCGGCGTGA 62.337 66.667 0.00 0.00 43.14 4.35
2195 2283 3.851845 TTTCCGGCGACTGACACCG 62.852 63.158 9.30 0.00 46.50 4.94
2196 2284 1.161563 TTTTTCCGGCGACTGACACC 61.162 55.000 9.30 0.00 0.00 4.16
2197 2285 0.234884 CTTTTTCCGGCGACTGACAC 59.765 55.000 9.30 0.00 0.00 3.67
2198 2286 1.503818 GCTTTTTCCGGCGACTGACA 61.504 55.000 9.30 0.00 0.00 3.58
2199 2287 1.206831 GCTTTTTCCGGCGACTGAC 59.793 57.895 9.30 0.00 0.00 3.51
2200 2288 0.816018 TTGCTTTTTCCGGCGACTGA 60.816 50.000 9.30 0.00 0.00 3.41
2201 2289 0.030101 TTTGCTTTTTCCGGCGACTG 59.970 50.000 9.30 0.00 0.00 3.51
2202 2290 0.030235 GTTTGCTTTTTCCGGCGACT 59.970 50.000 9.30 0.00 0.00 4.18
2203 2291 0.030235 AGTTTGCTTTTTCCGGCGAC 59.970 50.000 9.30 0.00 0.00 5.19
2204 2292 1.533731 CTAGTTTGCTTTTTCCGGCGA 59.466 47.619 9.30 0.00 0.00 5.54
2205 2293 1.533731 TCTAGTTTGCTTTTTCCGGCG 59.466 47.619 0.00 0.00 0.00 6.46
2206 2294 2.095212 CCTCTAGTTTGCTTTTTCCGGC 60.095 50.000 0.00 0.00 0.00 6.13
2207 2295 2.488153 CCCTCTAGTTTGCTTTTTCCGG 59.512 50.000 0.00 0.00 0.00 5.14
2208 2296 3.408634 TCCCTCTAGTTTGCTTTTTCCG 58.591 45.455 0.00 0.00 0.00 4.30
2209 2297 5.535030 TCTTTCCCTCTAGTTTGCTTTTTCC 59.465 40.000 0.00 0.00 0.00 3.13
2210 2298 6.635030 TCTTTCCCTCTAGTTTGCTTTTTC 57.365 37.500 0.00 0.00 0.00 2.29
2211 2299 7.418337 TTTCTTTCCCTCTAGTTTGCTTTTT 57.582 32.000 0.00 0.00 0.00 1.94
2212 2300 7.287696 TCATTTCTTTCCCTCTAGTTTGCTTTT 59.712 33.333 0.00 0.00 0.00 2.27
2213 2301 6.777580 TCATTTCTTTCCCTCTAGTTTGCTTT 59.222 34.615 0.00 0.00 0.00 3.51
2214 2302 6.306987 TCATTTCTTTCCCTCTAGTTTGCTT 58.693 36.000 0.00 0.00 0.00 3.91
2215 2303 5.880901 TCATTTCTTTCCCTCTAGTTTGCT 58.119 37.500 0.00 0.00 0.00 3.91
2216 2304 5.940470 TCTCATTTCTTTCCCTCTAGTTTGC 59.060 40.000 0.00 0.00 0.00 3.68
2217 2305 7.880195 TCTTCTCATTTCTTTCCCTCTAGTTTG 59.120 37.037 0.00 0.00 0.00 2.93
2218 2306 7.978925 TCTTCTCATTTCTTTCCCTCTAGTTT 58.021 34.615 0.00 0.00 0.00 2.66
2219 2307 7.560796 TCTTCTCATTTCTTTCCCTCTAGTT 57.439 36.000 0.00 0.00 0.00 2.24
2220 2308 7.560796 TTCTTCTCATTTCTTTCCCTCTAGT 57.439 36.000 0.00 0.00 0.00 2.57
2221 2309 8.726068 GTTTTCTTCTCATTTCTTTCCCTCTAG 58.274 37.037 0.00 0.00 0.00 2.43
2222 2310 8.440771 AGTTTTCTTCTCATTTCTTTCCCTCTA 58.559 33.333 0.00 0.00 0.00 2.43
2223 2311 7.293828 AGTTTTCTTCTCATTTCTTTCCCTCT 58.706 34.615 0.00 0.00 0.00 3.69
2224 2312 7.517614 AGTTTTCTTCTCATTTCTTTCCCTC 57.482 36.000 0.00 0.00 0.00 4.30
2225 2313 9.018582 CATAGTTTTCTTCTCATTTCTTTCCCT 57.981 33.333 0.00 0.00 0.00 4.20
2226 2314 9.014297 TCATAGTTTTCTTCTCATTTCTTTCCC 57.986 33.333 0.00 0.00 0.00 3.97
2235 2323 9.784531 TCTTGTTTCTCATAGTTTTCTTCTCAT 57.215 29.630 0.00 0.00 0.00 2.90
2236 2324 9.613428 TTCTTGTTTCTCATAGTTTTCTTCTCA 57.387 29.630 0.00 0.00 0.00 3.27
2238 2326 8.563732 GCTTCTTGTTTCTCATAGTTTTCTTCT 58.436 33.333 0.00 0.00 0.00 2.85
2239 2327 8.345565 TGCTTCTTGTTTCTCATAGTTTTCTTC 58.654 33.333 0.00 0.00 0.00 2.87
2240 2328 8.225603 TGCTTCTTGTTTCTCATAGTTTTCTT 57.774 30.769 0.00 0.00 0.00 2.52
2241 2329 7.807977 TGCTTCTTGTTTCTCATAGTTTTCT 57.192 32.000 0.00 0.00 0.00 2.52
2242 2330 9.122613 GATTGCTTCTTGTTTCTCATAGTTTTC 57.877 33.333 0.00 0.00 0.00 2.29
2243 2331 8.632679 TGATTGCTTCTTGTTTCTCATAGTTTT 58.367 29.630 0.00 0.00 0.00 2.43
2244 2332 8.169977 TGATTGCTTCTTGTTTCTCATAGTTT 57.830 30.769 0.00 0.00 0.00 2.66
2245 2333 7.750229 TGATTGCTTCTTGTTTCTCATAGTT 57.250 32.000 0.00 0.00 0.00 2.24
2246 2334 7.750229 TTGATTGCTTCTTGTTTCTCATAGT 57.250 32.000 0.00 0.00 0.00 2.12
2247 2335 9.073368 CATTTGATTGCTTCTTGTTTCTCATAG 57.927 33.333 0.00 0.00 0.00 2.23
2248 2336 8.030692 CCATTTGATTGCTTCTTGTTTCTCATA 58.969 33.333 0.00 0.00 0.00 2.15
2249 2337 6.872020 CCATTTGATTGCTTCTTGTTTCTCAT 59.128 34.615 0.00 0.00 0.00 2.90
2250 2338 6.040729 TCCATTTGATTGCTTCTTGTTTCTCA 59.959 34.615 0.00 0.00 0.00 3.27
2251 2339 6.449698 TCCATTTGATTGCTTCTTGTTTCTC 58.550 36.000 0.00 0.00 0.00 2.87
2252 2340 6.409524 TCCATTTGATTGCTTCTTGTTTCT 57.590 33.333 0.00 0.00 0.00 2.52
2253 2341 5.636543 CCTCCATTTGATTGCTTCTTGTTTC 59.363 40.000 0.00 0.00 0.00 2.78
2254 2342 5.305128 TCCTCCATTTGATTGCTTCTTGTTT 59.695 36.000 0.00 0.00 0.00 2.83
2255 2343 4.834496 TCCTCCATTTGATTGCTTCTTGTT 59.166 37.500 0.00 0.00 0.00 2.83
2256 2344 4.410099 TCCTCCATTTGATTGCTTCTTGT 58.590 39.130 0.00 0.00 0.00 3.16
2257 2345 4.142227 CCTCCTCCATTTGATTGCTTCTTG 60.142 45.833 0.00 0.00 0.00 3.02
2258 2346 4.021916 CCTCCTCCATTTGATTGCTTCTT 58.978 43.478 0.00 0.00 0.00 2.52
2259 2347 3.267812 TCCTCCTCCATTTGATTGCTTCT 59.732 43.478 0.00 0.00 0.00 2.85
2260 2348 3.624777 TCCTCCTCCATTTGATTGCTTC 58.375 45.455 0.00 0.00 0.00 3.86
2261 2349 3.744940 TCCTCCTCCATTTGATTGCTT 57.255 42.857 0.00 0.00 0.00 3.91
2262 2350 3.744940 TTCCTCCTCCATTTGATTGCT 57.255 42.857 0.00 0.00 0.00 3.91
2263 2351 5.349061 AATTTCCTCCTCCATTTGATTGC 57.651 39.130 0.00 0.00 0.00 3.56
2285 2373 4.288626 AGAGGCACCACTATCCACTAAAAA 59.711 41.667 0.00 0.00 0.00 1.94
2286 2374 3.844211 AGAGGCACCACTATCCACTAAAA 59.156 43.478 0.00 0.00 0.00 1.52
2287 2375 3.450904 AGAGGCACCACTATCCACTAAA 58.549 45.455 0.00 0.00 0.00 1.85
2288 2376 3.116096 AGAGGCACCACTATCCACTAA 57.884 47.619 0.00 0.00 0.00 2.24
2289 2377 2.848678 AGAGGCACCACTATCCACTA 57.151 50.000 0.00 0.00 0.00 2.74
2290 2378 2.766828 GTTAGAGGCACCACTATCCACT 59.233 50.000 0.00 0.00 0.00 4.00
2291 2379 2.500098 TGTTAGAGGCACCACTATCCAC 59.500 50.000 0.00 0.00 0.00 4.02
2292 2380 2.500098 GTGTTAGAGGCACCACTATCCA 59.500 50.000 0.00 0.00 0.00 3.41
2293 2381 2.500098 TGTGTTAGAGGCACCACTATCC 59.500 50.000 0.00 0.00 36.11 2.59
2294 2382 3.887621 TGTGTTAGAGGCACCACTATC 57.112 47.619 0.00 0.00 36.11 2.08
2295 2383 4.844349 ATTGTGTTAGAGGCACCACTAT 57.156 40.909 0.00 0.00 36.11 2.12
2296 2384 4.286032 AGAATTGTGTTAGAGGCACCACTA 59.714 41.667 0.00 0.00 36.11 2.74
2297 2385 3.073062 AGAATTGTGTTAGAGGCACCACT 59.927 43.478 0.00 0.00 36.11 4.00
2298 2386 3.412386 AGAATTGTGTTAGAGGCACCAC 58.588 45.455 0.00 0.00 36.11 4.16
2299 2387 3.788227 AGAATTGTGTTAGAGGCACCA 57.212 42.857 0.00 0.00 36.11 4.17
2300 2388 3.617263 CGTAGAATTGTGTTAGAGGCACC 59.383 47.826 0.00 0.00 36.11 5.01
2301 2389 3.617263 CCGTAGAATTGTGTTAGAGGCAC 59.383 47.826 0.00 0.00 37.37 5.01
2302 2390 3.369052 CCCGTAGAATTGTGTTAGAGGCA 60.369 47.826 0.00 0.00 0.00 4.75
2303 2391 3.118884 TCCCGTAGAATTGTGTTAGAGGC 60.119 47.826 0.00 0.00 0.00 4.70
2304 2392 4.441634 CCTCCCGTAGAATTGTGTTAGAGG 60.442 50.000 0.00 0.00 0.00 3.69
2305 2393 4.159879 ACCTCCCGTAGAATTGTGTTAGAG 59.840 45.833 0.00 0.00 0.00 2.43
2306 2394 4.091549 ACCTCCCGTAGAATTGTGTTAGA 58.908 43.478 0.00 0.00 0.00 2.10
2307 2395 4.467198 ACCTCCCGTAGAATTGTGTTAG 57.533 45.455 0.00 0.00 0.00 2.34
2308 2396 4.895668 AACCTCCCGTAGAATTGTGTTA 57.104 40.909 0.00 0.00 0.00 2.41
2309 2397 3.782656 AACCTCCCGTAGAATTGTGTT 57.217 42.857 0.00 0.00 0.00 3.32
2310 2398 4.895668 TTAACCTCCCGTAGAATTGTGT 57.104 40.909 0.00 0.00 0.00 3.72
2311 2399 7.046033 AGTATTTAACCTCCCGTAGAATTGTG 58.954 38.462 0.00 0.00 0.00 3.33
2312 2400 7.191593 AGTATTTAACCTCCCGTAGAATTGT 57.808 36.000 0.00 0.00 0.00 2.71
2313 2401 7.226128 GGAAGTATTTAACCTCCCGTAGAATTG 59.774 40.741 0.00 0.00 33.13 2.32
2314 2402 7.278135 GGAAGTATTTAACCTCCCGTAGAATT 58.722 38.462 0.00 0.00 33.13 2.17
2315 2403 6.462067 CGGAAGTATTTAACCTCCCGTAGAAT 60.462 42.308 0.00 0.00 35.53 2.40
2316 2404 5.163519 CGGAAGTATTTAACCTCCCGTAGAA 60.164 44.000 0.00 0.00 35.53 2.10
2317 2405 4.339247 CGGAAGTATTTAACCTCCCGTAGA 59.661 45.833 0.00 0.00 35.53 2.59
2318 2406 4.339247 TCGGAAGTATTTAACCTCCCGTAG 59.661 45.833 0.00 0.00 35.53 3.51
2319 2407 4.277476 TCGGAAGTATTTAACCTCCCGTA 58.723 43.478 0.00 0.00 35.53 4.02
2320 2408 3.099141 TCGGAAGTATTTAACCTCCCGT 58.901 45.455 0.00 0.00 35.53 5.28
2321 2409 3.806625 TCGGAAGTATTTAACCTCCCG 57.193 47.619 0.00 0.00 35.53 5.14
2322 2410 5.095145 ACTTCGGAAGTATTTAACCTCCC 57.905 43.478 21.24 0.00 40.69 4.30
2323 2411 5.975282 AGACTTCGGAAGTATTTAACCTCC 58.025 41.667 22.46 7.02 43.03 4.30
2324 2412 8.992835 TTTAGACTTCGGAAGTATTTAACCTC 57.007 34.615 22.46 7.70 43.03 3.85
2325 2413 9.783081 TTTTTAGACTTCGGAAGTATTTAACCT 57.217 29.630 22.46 15.25 43.03 3.50
2348 2436 7.996644 TGTCATAACACTTCCCTTACTCTTTTT 59.003 33.333 0.00 0.00 0.00 1.94
2349 2437 7.514721 TGTCATAACACTTCCCTTACTCTTTT 58.485 34.615 0.00 0.00 0.00 2.27
2350 2438 7.074653 TGTCATAACACTTCCCTTACTCTTT 57.925 36.000 0.00 0.00 0.00 2.52
2351 2439 6.681729 TGTCATAACACTTCCCTTACTCTT 57.318 37.500 0.00 0.00 0.00 2.85
2352 2440 6.681729 TTGTCATAACACTTCCCTTACTCT 57.318 37.500 0.00 0.00 34.35 3.24
2353 2441 7.148239 CCAATTGTCATAACACTTCCCTTACTC 60.148 40.741 4.43 0.00 34.35 2.59
2354 2442 6.659242 CCAATTGTCATAACACTTCCCTTACT 59.341 38.462 4.43 0.00 34.35 2.24
2355 2443 6.433093 ACCAATTGTCATAACACTTCCCTTAC 59.567 38.462 4.43 0.00 34.35 2.34
2356 2444 6.432783 CACCAATTGTCATAACACTTCCCTTA 59.567 38.462 4.43 0.00 34.35 2.69
2357 2445 5.243730 CACCAATTGTCATAACACTTCCCTT 59.756 40.000 4.43 0.00 34.35 3.95
2358 2446 4.766891 CACCAATTGTCATAACACTTCCCT 59.233 41.667 4.43 0.00 34.35 4.20
2359 2447 4.082245 CCACCAATTGTCATAACACTTCCC 60.082 45.833 4.43 0.00 34.35 3.97
2360 2448 4.522789 ACCACCAATTGTCATAACACTTCC 59.477 41.667 4.43 0.00 34.35 3.46
2361 2449 5.616866 CGACCACCAATTGTCATAACACTTC 60.617 44.000 4.43 0.00 34.35 3.01
2362 2450 4.215399 CGACCACCAATTGTCATAACACTT 59.785 41.667 4.43 0.00 34.35 3.16
2363 2451 3.751175 CGACCACCAATTGTCATAACACT 59.249 43.478 4.43 0.00 34.35 3.55
2364 2452 3.500680 ACGACCACCAATTGTCATAACAC 59.499 43.478 4.43 0.00 34.35 3.32
2365 2453 3.500299 CACGACCACCAATTGTCATAACA 59.500 43.478 4.43 0.00 0.00 2.41
2366 2454 3.749088 TCACGACCACCAATTGTCATAAC 59.251 43.478 4.43 0.00 0.00 1.89
2367 2455 3.749088 GTCACGACCACCAATTGTCATAA 59.251 43.478 4.43 0.00 0.00 1.90
2368 2456 3.244249 TGTCACGACCACCAATTGTCATA 60.244 43.478 4.43 0.00 0.00 2.15
2369 2457 2.151202 GTCACGACCACCAATTGTCAT 58.849 47.619 4.43 0.00 0.00 3.06
2370 2458 1.134371 TGTCACGACCACCAATTGTCA 60.134 47.619 4.43 0.00 0.00 3.58
2371 2459 1.263217 GTGTCACGACCACCAATTGTC 59.737 52.381 4.43 0.00 0.00 3.18
2372 2460 1.305201 GTGTCACGACCACCAATTGT 58.695 50.000 4.43 0.00 0.00 2.71
2373 2461 0.234625 CGTGTCACGACCACCAATTG 59.765 55.000 20.75 0.00 46.05 2.32
2374 2462 0.882927 CCGTGTCACGACCACCAATT 60.883 55.000 26.53 0.00 46.05 2.32
2375 2463 1.301401 CCGTGTCACGACCACCAAT 60.301 57.895 26.53 0.00 46.05 3.16
2376 2464 1.390383 TACCGTGTCACGACCACCAA 61.390 55.000 26.53 1.07 46.05 3.67
2377 2465 1.390383 TTACCGTGTCACGACCACCA 61.390 55.000 26.53 1.58 46.05 4.17
2378 2466 0.037975 ATTACCGTGTCACGACCACC 60.038 55.000 26.53 0.00 46.05 4.61
2379 2467 1.458064 CAATTACCGTGTCACGACCAC 59.542 52.381 26.53 0.00 46.05 4.16
2380 2468 1.068895 ACAATTACCGTGTCACGACCA 59.931 47.619 26.53 9.63 46.05 4.02
2381 2469 1.787012 ACAATTACCGTGTCACGACC 58.213 50.000 26.53 0.00 46.05 4.79
2382 2470 2.096614 CCAACAATTACCGTGTCACGAC 60.097 50.000 26.53 0.00 46.05 4.34
2383 2471 2.136728 CCAACAATTACCGTGTCACGA 58.863 47.619 26.53 7.35 46.05 4.35
2384 2472 1.868498 ACCAACAATTACCGTGTCACG 59.132 47.619 18.54 18.54 42.11 4.35
2385 2473 3.562557 AGAACCAACAATTACCGTGTCAC 59.437 43.478 0.00 0.00 0.00 3.67
2386 2474 3.562141 CAGAACCAACAATTACCGTGTCA 59.438 43.478 0.00 0.00 0.00 3.58
2387 2475 3.058501 CCAGAACCAACAATTACCGTGTC 60.059 47.826 0.00 0.00 0.00 3.67
2388 2476 2.882137 CCAGAACCAACAATTACCGTGT 59.118 45.455 0.00 0.00 0.00 4.49
2389 2477 2.882137 ACCAGAACCAACAATTACCGTG 59.118 45.455 0.00 0.00 0.00 4.94
2390 2478 3.143728 GACCAGAACCAACAATTACCGT 58.856 45.455 0.00 0.00 0.00 4.83
2391 2479 3.142951 TGACCAGAACCAACAATTACCG 58.857 45.455 0.00 0.00 0.00 4.02
2392 2480 4.558697 GCTTGACCAGAACCAACAATTACC 60.559 45.833 0.00 0.00 0.00 2.85
2393 2481 4.546570 GCTTGACCAGAACCAACAATTAC 58.453 43.478 0.00 0.00 0.00 1.89
2394 2482 3.572255 GGCTTGACCAGAACCAACAATTA 59.428 43.478 0.00 0.00 38.86 1.40
2395 2483 2.365293 GGCTTGACCAGAACCAACAATT 59.635 45.455 0.00 0.00 38.86 2.32
2396 2484 1.963515 GGCTTGACCAGAACCAACAAT 59.036 47.619 0.00 0.00 38.86 2.71
2397 2485 1.341482 TGGCTTGACCAGAACCAACAA 60.341 47.619 0.00 0.00 46.36 2.83
2398 2486 0.257328 TGGCTTGACCAGAACCAACA 59.743 50.000 0.00 0.00 46.36 3.33
2399 2487 3.109847 TGGCTTGACCAGAACCAAC 57.890 52.632 0.00 0.00 46.36 3.77
2408 2496 2.488153 GGAGTGTAAATGTGGCTTGACC 59.512 50.000 0.00 0.00 39.84 4.02
2409 2497 3.189287 CAGGAGTGTAAATGTGGCTTGAC 59.811 47.826 0.00 0.00 0.00 3.18
2410 2498 3.411446 CAGGAGTGTAAATGTGGCTTGA 58.589 45.455 0.00 0.00 0.00 3.02
2411 2499 3.837213 CAGGAGTGTAAATGTGGCTTG 57.163 47.619 0.00 0.00 0.00 4.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.