Multiple sequence alignment - TraesCS7D01G318200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G318200 chr7D 100.000 9630 0 0 1 9630 406316437 406326066 0.000000e+00 17784.0
1 TraesCS7D01G318200 chr7D 85.944 249 31 3 6895 7142 62126357 62126112 7.420000e-66 263.0
2 TraesCS7D01G318200 chr7D 82.540 252 39 5 6890 7138 57880420 57880669 5.860000e-52 217.0
3 TraesCS7D01G318200 chr7D 87.013 77 7 3 6163 6238 165657312 165657238 6.200000e-12 84.2
4 TraesCS7D01G318200 chr7B 97.898 5090 78 13 1626 6695 417612122 417617202 0.000000e+00 8780.0
5 TraesCS7D01G318200 chr7B 95.891 2093 70 7 6780 8864 417617198 417619282 0.000000e+00 3374.0
6 TraesCS7D01G318200 chr7B 97.893 712 11 3 915 1625 417611340 417612048 0.000000e+00 1229.0
7 TraesCS7D01G318200 chr7B 87.535 722 53 16 19 729 417610241 417610936 0.000000e+00 800.0
8 TraesCS7D01G318200 chr7B 90.310 258 22 2 8587 8842 417621171 417621427 1.550000e-87 335.0
9 TraesCS7D01G318200 chr7B 89.340 197 21 0 8331 8527 417620979 417621175 2.080000e-61 248.0
10 TraesCS7D01G318200 chr7B 95.522 134 4 2 728 859 417611029 417611162 7.580000e-51 213.0
11 TraesCS7D01G318200 chr7B 89.844 128 9 4 9019 9143 63543599 63543725 2.780000e-35 161.0
12 TraesCS7D01G318200 chr7B 92.929 99 1 2 6689 6786 432933234 432933327 1.300000e-28 139.0
13 TraesCS7D01G318200 chr7B 92.683 41 3 0 6156 6196 1283835 1283795 1.040000e-04 60.2
14 TraesCS7D01G318200 chr7B 100.000 28 0 0 1 28 417610215 417610242 1.700000e-02 52.8
15 TraesCS7D01G318200 chr7A 96.765 4822 72 13 1626 6438 463642517 463647263 0.000000e+00 7963.0
16 TraesCS7D01G318200 chr7A 94.296 2279 75 18 6780 9025 463647829 463650085 0.000000e+00 3437.0
17 TraesCS7D01G318200 chr7A 95.308 1641 50 14 1 1625 463640810 463642439 0.000000e+00 2579.0
18 TraesCS7D01G318200 chr7A 91.304 253 19 2 8587 8837 463663026 463663277 9.260000e-90 342.0
19 TraesCS7D01G318200 chr7A 88.255 298 3 2 6430 6695 463647536 463647833 2.590000e-85 327.0
20 TraesCS7D01G318200 chr2B 83.236 513 76 8 8124 8631 748425784 748425277 6.810000e-126 462.0
21 TraesCS7D01G318200 chr2B 88.696 115 7 2 6678 6792 782683954 782683846 1.690000e-27 135.0
22 TraesCS7D01G318200 chr2D 83.008 512 79 6 8124 8631 613098691 613098184 3.170000e-124 457.0
23 TraesCS7D01G318200 chr2D 85.714 266 37 1 6886 7150 142055244 142055509 7.360000e-71 279.0
24 TraesCS7D01G318200 chr2D 83.146 267 44 1 6887 7152 340301620 340301886 9.660000e-60 243.0
25 TraesCS7D01G318200 chr2D 82.129 263 39 5 6890 7152 635871583 635871329 1.630000e-52 219.0
26 TraesCS7D01G318200 chr2D 91.597 119 8 2 9019 9135 331766851 331766733 7.740000e-36 163.0
27 TraesCS7D01G318200 chr2D 87.770 139 13 3 9006 9143 625527970 625528105 1.000000e-34 159.0
28 TraesCS7D01G318200 chr2A 81.641 512 86 6 8124 8631 744785934 744785427 1.500000e-112 418.0
29 TraesCS7D01G318200 chr2A 80.741 270 48 4 6887 7153 606574225 606574493 3.520000e-49 207.0
30 TraesCS7D01G318200 chr4B 82.156 269 45 3 6885 7151 667599664 667599397 2.710000e-55 228.0
31 TraesCS7D01G318200 chr4B 76.259 278 46 8 9350 9612 400685626 400685354 7.850000e-26 130.0
32 TraesCS7D01G318200 chr5D 82.642 265 37 7 9351 9612 556699893 556700151 9.730000e-55 226.0
33 TraesCS7D01G318200 chr5D 90.244 123 11 1 9019 9140 28942953 28943075 1.000000e-34 159.0
34 TraesCS7D01G318200 chr5D 84.211 95 7 7 6164 6256 410399113 410399201 1.720000e-12 86.1
35 TraesCS7D01G318200 chr5D 77.397 146 17 11 3023 3157 256471663 256471523 1.340000e-08 73.1
36 TraesCS7D01G318200 chr6D 90.551 127 10 2 9013 9137 429084208 429084334 5.980000e-37 167.0
37 TraesCS7D01G318200 chr6D 88.372 129 13 2 9009 9136 298345735 298345608 4.660000e-33 154.0
38 TraesCS7D01G318200 chr6D 85.065 154 17 6 9006 9156 380375073 380375223 1.680000e-32 152.0
39 TraesCS7D01G318200 chr6D 74.597 248 41 12 9402 9629 434258371 434258616 1.330000e-13 89.8
40 TraesCS7D01G318200 chr6D 91.667 48 2 2 6209 6255 300720373 300720419 2.240000e-06 65.8
41 TraesCS7D01G318200 chr1D 92.241 116 8 1 9019 9133 297539976 297540091 7.740000e-36 163.0
42 TraesCS7D01G318200 chr1D 91.525 118 9 1 9019 9135 364729457 364729340 2.780000e-35 161.0
43 TraesCS7D01G318200 chr1D 93.684 95 6 0 6690 6784 444836272 444836178 1.010000e-29 143.0
44 TraesCS7D01G318200 chr4D 77.305 282 43 11 9350 9612 320042975 320043254 7.790000e-31 147.0
45 TraesCS7D01G318200 chr4D 76.431 297 45 16 9351 9630 8407320 8407608 4.690000e-28 137.0
46 TraesCS7D01G318200 chr4D 81.690 142 16 9 3023 3157 220336925 220337063 1.020000e-19 110.0
47 TraesCS7D01G318200 chr6A 92.857 98 3 1 6686 6783 563554315 563554408 1.300000e-28 139.0
48 TraesCS7D01G318200 chr6A 91.489 47 2 2 6209 6254 211564401 211564446 8.070000e-06 63.9
49 TraesCS7D01G318200 chr6A 95.000 40 2 0 6157 6196 595071516 595071477 8.070000e-06 63.9
50 TraesCS7D01G318200 chrUn 90.654 107 5 2 6685 6790 95223256 95223154 4.690000e-28 137.0
51 TraesCS7D01G318200 chrUn 76.596 235 34 11 9410 9629 85460060 85460288 1.020000e-19 110.0
52 TraesCS7D01G318200 chr1B 92.079 101 3 1 6683 6783 479429928 479430023 4.690000e-28 137.0
53 TraesCS7D01G318200 chr1B 89.189 111 4 4 6692 6801 97376095 97376198 2.180000e-26 132.0
54 TraesCS7D01G318200 chr1B 82.609 92 9 6 3020 3105 345314155 345314245 3.730000e-09 75.0
55 TraesCS7D01G318200 chr1B 90.000 50 3 2 6209 6257 61794554 61794602 8.070000e-06 63.9
56 TraesCS7D01G318200 chr5B 90.566 106 3 3 6679 6783 678507279 678507378 6.070000e-27 134.0
57 TraesCS7D01G318200 chr5B 83.217 143 17 6 3020 3156 665975928 665976069 3.650000e-24 124.0
58 TraesCS7D01G318200 chr1A 84.672 137 17 4 3023 3155 59991670 59991534 6.070000e-27 134.0
59 TraesCS7D01G318200 chr1A 83.696 92 8 7 3020 3105 335022589 335022679 8.020000e-11 80.5
60 TraesCS7D01G318200 chr3B 81.928 166 19 9 9367 9526 421568460 421568300 7.850000e-26 130.0
61 TraesCS7D01G318200 chr4A 86.400 125 8 5 6663 6783 646312764 646312883 2.820000e-25 128.0
62 TraesCS7D01G318200 chr4A 79.444 180 29 7 9350 9525 153246217 153246042 4.720000e-23 121.0
63 TraesCS7D01G318200 chr4A 81.609 87 9 6 3076 3157 387121432 387121348 2.240000e-06 65.8
64 TraesCS7D01G318200 chr4A 78.505 107 14 8 6153 6257 518197140 518197041 2.900000e-05 62.1
65 TraesCS7D01G318200 chr3A 77.350 234 35 10 9414 9629 432858548 432858315 1.310000e-23 122.0
66 TraesCS7D01G318200 chr3A 89.796 49 3 2 6208 6255 264149705 264149658 2.900000e-05 62.1
67 TraesCS7D01G318200 chr6B 75.373 268 49 11 9349 9611 715218788 715218533 7.900000e-21 113.0
68 TraesCS7D01G318200 chr5A 86.316 95 8 5 6164 6256 521937820 521937911 2.210000e-16 99.0
69 TraesCS7D01G318200 chr5A 83.099 71 8 4 3020 3087 657051514 657051583 2.900000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G318200 chr7D 406316437 406326066 9629 False 17784.000 17784 100.000000 1 9630 1 chr7D.!!$F2 9629
1 TraesCS7D01G318200 chr7B 417610215 417621427 11212 False 1878.975 8780 94.298625 1 8864 8 chr7B.!!$F3 8863
2 TraesCS7D01G318200 chr7A 463640810 463650085 9275 False 3576.500 7963 93.656000 1 9025 4 chr7A.!!$F2 9024
3 TraesCS7D01G318200 chr2B 748425277 748425784 507 True 462.000 462 83.236000 8124 8631 1 chr2B.!!$R1 507
4 TraesCS7D01G318200 chr2D 613098184 613098691 507 True 457.000 457 83.008000 8124 8631 1 chr2D.!!$R2 507
5 TraesCS7D01G318200 chr2A 744785427 744785934 507 True 418.000 418 81.641000 8124 8631 1 chr2A.!!$R1 507

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
402 427 0.824759 CGAGGGTTTAGTGAGGGAGG 59.175 60.000 0.00 0.0 0.00 4.30 F
1138 1386 0.323725 GGATGCAAAAGGGGAGCAGA 60.324 55.000 0.00 0.0 42.14 4.26 F
2218 2545 2.268762 TTGTGCTGGCTGTATGAACA 57.731 45.000 0.00 0.0 0.00 3.18 F
2751 3078 1.911357 TCACTGGATGGTGAGCAATCT 59.089 47.619 0.00 0.0 40.72 2.40 F
3661 3995 3.386726 CCTTCGATGGGTATGTTGGTAGA 59.613 47.826 9.48 0.0 0.00 2.59 F
3916 4250 4.859798 GGTGACTTACAAGTTCTCGATCAG 59.140 45.833 0.00 0.0 39.88 2.90 F
4524 4859 4.503123 GGTTTGCAGTTTGCCTATTTCCTT 60.503 41.667 0.00 0.0 44.23 3.36 F
5855 6190 2.283145 AGACAGTTCTGCTTGGCATT 57.717 45.000 0.00 0.0 38.13 3.56 F
6709 7391 0.258194 AGTACTCCCTCCGTTCCGAT 59.742 55.000 0.00 0.0 0.00 4.18 F
7855 8556 0.331616 GGGAATAGCACTTGGTGGGT 59.668 55.000 0.00 0.0 33.64 4.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1858 2185 3.321968 TGTTAGAGTGCTGAGAAAGAGCA 59.678 43.478 0.00 0.00 44.22 4.26 R
2471 2798 3.748027 GCAGGATTCCTCTCTTGCATGAT 60.748 47.826 0.98 0.00 44.93 2.45 R
3399 3733 0.390472 CGCACCCAAGAAGGAGAGAC 60.390 60.000 0.00 0.00 41.22 3.36 R
3881 4215 2.847327 AAGTCACCATCACCACTCAG 57.153 50.000 0.00 0.00 0.00 3.35 R
4524 4859 9.213799 GTGAAAATTGGGCAATTAAACAGAATA 57.786 29.630 0.00 0.00 39.88 1.75 R
5253 5588 9.513906 TGTGGATAGTACATTTGATGAAAAAGA 57.486 29.630 0.00 0.00 0.00 2.52 R
6297 6661 4.019174 TGAATTCTCTTCATTTCCAGGCC 58.981 43.478 7.05 0.00 0.00 5.19 R
6765 7447 0.033796 TGTACTCCCTCCGTTCCGAT 60.034 55.000 0.00 0.00 0.00 4.18 R
7896 8597 0.247814 GCAATTGCTCCGTGATCACG 60.248 55.000 35.57 35.57 45.12 4.35 R
9104 9857 0.025513 CATTACAGACGCAAGCGCTC 59.974 55.000 12.06 11.06 44.19 5.03 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 57 5.088026 CCTAAAACCCCAACCTTCCAAATA 58.912 41.667 0.00 0.00 0.00 1.40
92 107 1.269936 CCACAACGTCGTAGGGTTTCT 60.270 52.381 0.00 0.00 0.00 2.52
253 269 2.401766 GGGTGCAATGTCGCCTCTG 61.402 63.158 0.00 0.00 36.85 3.35
254 270 2.482374 GTGCAATGTCGCCTCTGC 59.518 61.111 0.00 0.00 35.32 4.26
255 271 2.747460 TGCAATGTCGCCTCTGCC 60.747 61.111 0.00 0.00 33.78 4.85
256 272 3.512516 GCAATGTCGCCTCTGCCC 61.513 66.667 0.00 0.00 0.00 5.36
257 273 2.270205 CAATGTCGCCTCTGCCCT 59.730 61.111 0.00 0.00 0.00 5.19
258 274 1.817099 CAATGTCGCCTCTGCCCTC 60.817 63.158 0.00 0.00 0.00 4.30
259 275 1.992277 AATGTCGCCTCTGCCCTCT 60.992 57.895 0.00 0.00 0.00 3.69
392 417 2.263540 GGCACGAGCGAGGGTTTA 59.736 61.111 0.00 0.00 43.41 2.01
394 419 1.080025 GCACGAGCGAGGGTTTAGT 60.080 57.895 0.00 0.00 0.00 2.24
402 427 0.824759 CGAGGGTTTAGTGAGGGAGG 59.175 60.000 0.00 0.00 0.00 4.30
454 479 4.648970 GGTGCTCTGCTTTTCGTTTATAC 58.351 43.478 0.00 0.00 0.00 1.47
530 555 2.008045 GCGACGCTGGGGTTATGTTAA 61.008 52.381 13.73 0.00 0.00 2.01
541 566 2.876550 GGTTATGTTAATGCGGAGGGAC 59.123 50.000 0.00 0.00 0.00 4.46
583 608 3.099905 AGTGGTCGATTTCTCCATCTGA 58.900 45.455 0.00 0.00 33.68 3.27
592 617 1.977056 TCTCCATCTGATGCCATTGC 58.023 50.000 12.17 0.00 38.26 3.56
609 634 2.672651 CCTTGCGACATGTGGCCA 60.673 61.111 27.16 17.23 33.12 5.36
676 701 3.046087 GCTGCGCTGCTCAAGTGA 61.046 61.111 29.28 0.00 38.83 3.41
677 702 2.610694 GCTGCGCTGCTCAAGTGAA 61.611 57.895 29.28 0.00 38.83 3.18
684 710 2.158449 CGCTGCTCAAGTGAAGGTTTAG 59.842 50.000 0.00 0.00 38.83 1.85
719 745 0.999406 GACGCGTGTTGTATCTGCAT 59.001 50.000 20.70 0.00 0.00 3.96
826 948 2.740981 CTCTGCATGTCTTCTGTTGACC 59.259 50.000 0.00 0.00 33.83 4.02
865 1113 5.704515 AGCCAGATTGCATAATGTATGACTC 59.295 40.000 0.00 0.00 38.45 3.36
1138 1386 0.323725 GGATGCAAAAGGGGAGCAGA 60.324 55.000 0.00 0.00 42.14 4.26
1769 2094 4.159857 TGTTTACTTGTTGTGTTGAACGC 58.840 39.130 1.20 1.20 0.00 4.84
1929 2256 4.267452 CGAAACCACACAATTGTTTTCCTG 59.733 41.667 20.12 8.37 32.28 3.86
2218 2545 2.268762 TTGTGCTGGCTGTATGAACA 57.731 45.000 0.00 0.00 0.00 3.18
2273 2600 5.339200 TGGATACTTTCTGATCAAGGGAACC 60.339 44.000 0.00 0.00 46.16 3.62
2751 3078 1.911357 TCACTGGATGGTGAGCAATCT 59.089 47.619 0.00 0.00 40.72 2.40
3105 3438 4.262164 GGTAAATATGCAGAAAGCCCCATG 60.262 45.833 0.00 0.00 44.83 3.66
3399 3733 9.956720 GAATGATGGTTTCCATAAAGTCATTAG 57.043 33.333 11.84 0.00 45.26 1.73
3661 3995 3.386726 CCTTCGATGGGTATGTTGGTAGA 59.613 47.826 9.48 0.00 0.00 2.59
3916 4250 4.859798 GGTGACTTACAAGTTCTCGATCAG 59.140 45.833 0.00 0.00 39.88 2.90
4524 4859 4.503123 GGTTTGCAGTTTGCCTATTTCCTT 60.503 41.667 0.00 0.00 44.23 3.36
5253 5588 9.344772 ACAAATTCTCAGTATAGAGTCGATACT 57.655 33.333 17.39 17.39 40.08 2.12
5854 6189 3.641434 ATAGACAGTTCTGCTTGGCAT 57.359 42.857 0.00 0.00 38.13 4.40
5855 6190 2.283145 AGACAGTTCTGCTTGGCATT 57.717 45.000 0.00 0.00 38.13 3.56
5856 6191 3.423539 AGACAGTTCTGCTTGGCATTA 57.576 42.857 0.00 0.00 38.13 1.90
5857 6192 3.960571 AGACAGTTCTGCTTGGCATTAT 58.039 40.909 0.00 0.00 38.13 1.28
5858 6193 5.102953 AGACAGTTCTGCTTGGCATTATA 57.897 39.130 0.00 0.00 38.13 0.98
5859 6194 5.688807 AGACAGTTCTGCTTGGCATTATAT 58.311 37.500 0.00 0.00 38.13 0.86
5860 6195 6.125029 AGACAGTTCTGCTTGGCATTATATT 58.875 36.000 0.00 0.00 38.13 1.28
5861 6196 6.604795 AGACAGTTCTGCTTGGCATTATATTT 59.395 34.615 0.00 0.00 38.13 1.40
5862 6197 7.123247 AGACAGTTCTGCTTGGCATTATATTTT 59.877 33.333 0.00 0.00 38.13 1.82
5863 6198 8.292444 ACAGTTCTGCTTGGCATTATATTTTA 57.708 30.769 0.00 0.00 38.13 1.52
5864 6199 8.917088 ACAGTTCTGCTTGGCATTATATTTTAT 58.083 29.630 0.00 0.00 38.13 1.40
5865 6200 9.403110 CAGTTCTGCTTGGCATTATATTTTATC 57.597 33.333 0.00 0.00 38.13 1.75
5866 6201 9.359653 AGTTCTGCTTGGCATTATATTTTATCT 57.640 29.630 0.00 0.00 38.13 1.98
5867 6202 9.403110 GTTCTGCTTGGCATTATATTTTATCTG 57.597 33.333 0.00 0.00 38.13 2.90
5868 6203 8.696043 TCTGCTTGGCATTATATTTTATCTGT 57.304 30.769 0.00 0.00 38.13 3.41
5869 6204 9.135189 TCTGCTTGGCATTATATTTTATCTGTT 57.865 29.630 0.00 0.00 38.13 3.16
5870 6205 9.754382 CTGCTTGGCATTATATTTTATCTGTTT 57.246 29.630 0.00 0.00 38.13 2.83
6086 6448 3.752747 TGTGCACATGTGGAAATACTCTG 59.247 43.478 26.55 0.00 31.21 3.35
6192 6554 7.769220 TCCCTCTGTAAACTAATCTAAAGACG 58.231 38.462 0.00 0.00 0.00 4.18
6241 6603 8.915871 AACTGCGAAAACGTCTTATATTAGTA 57.084 30.769 0.00 0.00 0.00 1.82
6567 7211 6.671190 TGCAGAAAATACAATGTGACTTCAG 58.329 36.000 0.00 0.00 0.00 3.02
6698 7380 8.958119 TGATGTGATTGTTAATTAGTACTCCC 57.042 34.615 0.00 0.00 0.00 4.30
6699 7381 8.768397 TGATGTGATTGTTAATTAGTACTCCCT 58.232 33.333 0.00 0.00 0.00 4.20
6700 7382 9.262358 GATGTGATTGTTAATTAGTACTCCCTC 57.738 37.037 0.00 0.00 0.00 4.30
6701 7383 7.562135 TGTGATTGTTAATTAGTACTCCCTCC 58.438 38.462 0.00 0.00 0.00 4.30
6702 7384 6.700520 GTGATTGTTAATTAGTACTCCCTCCG 59.299 42.308 0.00 0.00 0.00 4.63
6703 7385 6.381994 TGATTGTTAATTAGTACTCCCTCCGT 59.618 38.462 0.00 0.00 0.00 4.69
6704 7386 6.610075 TTGTTAATTAGTACTCCCTCCGTT 57.390 37.500 0.00 0.00 0.00 4.44
6705 7387 6.212888 TGTTAATTAGTACTCCCTCCGTTC 57.787 41.667 0.00 0.00 0.00 3.95
6706 7388 5.127682 TGTTAATTAGTACTCCCTCCGTTCC 59.872 44.000 0.00 0.00 0.00 3.62
6707 7389 1.755179 TTAGTACTCCCTCCGTTCCG 58.245 55.000 0.00 0.00 0.00 4.30
6708 7390 0.911769 TAGTACTCCCTCCGTTCCGA 59.088 55.000 0.00 0.00 0.00 4.55
6709 7391 0.258194 AGTACTCCCTCCGTTCCGAT 59.742 55.000 0.00 0.00 0.00 4.18
6710 7392 1.109609 GTACTCCCTCCGTTCCGATT 58.890 55.000 0.00 0.00 0.00 3.34
6711 7393 1.479730 GTACTCCCTCCGTTCCGATTT 59.520 52.381 0.00 0.00 0.00 2.17
6712 7394 1.856629 ACTCCCTCCGTTCCGATTTA 58.143 50.000 0.00 0.00 0.00 1.40
6713 7395 1.479730 ACTCCCTCCGTTCCGATTTAC 59.520 52.381 0.00 0.00 0.00 2.01
6714 7396 1.755380 CTCCCTCCGTTCCGATTTACT 59.245 52.381 0.00 0.00 0.00 2.24
6715 7397 1.753073 TCCCTCCGTTCCGATTTACTC 59.247 52.381 0.00 0.00 0.00 2.59
6717 7399 1.133790 CCTCCGTTCCGATTTACTCGT 59.866 52.381 0.00 0.00 46.18 4.18
6718 7400 2.448219 CTCCGTTCCGATTTACTCGTC 58.552 52.381 0.00 0.00 46.18 4.20
6719 7401 1.186030 CCGTTCCGATTTACTCGTCG 58.814 55.000 0.00 0.00 46.18 5.12
6720 7402 1.466360 CCGTTCCGATTTACTCGTCGT 60.466 52.381 0.00 0.00 46.18 4.34
6721 7403 1.576246 CGTTCCGATTTACTCGTCGTG 59.424 52.381 0.00 0.00 46.18 4.35
6722 7404 1.916000 GTTCCGATTTACTCGTCGTGG 59.084 52.381 0.00 0.00 46.18 4.94
6723 7405 1.167851 TCCGATTTACTCGTCGTGGT 58.832 50.000 0.00 0.00 46.18 4.16
6724 7406 1.541147 TCCGATTTACTCGTCGTGGTT 59.459 47.619 0.00 0.00 46.18 3.67
6725 7407 2.030007 TCCGATTTACTCGTCGTGGTTT 60.030 45.455 0.00 0.00 46.18 3.27
6726 7408 2.733026 CCGATTTACTCGTCGTGGTTTT 59.267 45.455 0.00 0.00 46.18 2.43
6727 7409 3.919804 CCGATTTACTCGTCGTGGTTTTA 59.080 43.478 0.00 0.00 46.18 1.52
6728 7410 4.030977 CCGATTTACTCGTCGTGGTTTTAG 59.969 45.833 0.00 0.00 46.18 1.85
6729 7411 4.618489 CGATTTACTCGTCGTGGTTTTAGT 59.382 41.667 0.00 0.00 42.56 2.24
6730 7412 5.117592 CGATTTACTCGTCGTGGTTTTAGTT 59.882 40.000 0.00 0.00 42.56 2.24
6731 7413 6.346040 CGATTTACTCGTCGTGGTTTTAGTTT 60.346 38.462 0.00 0.00 42.56 2.66
6732 7414 7.148983 CGATTTACTCGTCGTGGTTTTAGTTTA 60.149 37.037 0.00 0.00 42.56 2.01
6733 7415 6.991485 TTACTCGTCGTGGTTTTAGTTTAG 57.009 37.500 0.00 0.00 0.00 1.85
6734 7416 4.936891 ACTCGTCGTGGTTTTAGTTTAGT 58.063 39.130 0.00 0.00 0.00 2.24
6735 7417 5.351458 ACTCGTCGTGGTTTTAGTTTAGTT 58.649 37.500 0.00 0.00 0.00 2.24
6736 7418 5.460091 ACTCGTCGTGGTTTTAGTTTAGTTC 59.540 40.000 0.00 0.00 0.00 3.01
6737 7419 5.347342 TCGTCGTGGTTTTAGTTTAGTTCA 58.653 37.500 0.00 0.00 0.00 3.18
6738 7420 5.809562 TCGTCGTGGTTTTAGTTTAGTTCAA 59.190 36.000 0.00 0.00 0.00 2.69
6739 7421 6.312426 TCGTCGTGGTTTTAGTTTAGTTCAAA 59.688 34.615 0.00 0.00 0.00 2.69
6740 7422 7.011295 TCGTCGTGGTTTTAGTTTAGTTCAAAT 59.989 33.333 0.00 0.00 0.00 2.32
6741 7423 7.641020 CGTCGTGGTTTTAGTTTAGTTCAAATT 59.359 33.333 0.00 0.00 0.00 1.82
6742 7424 9.292846 GTCGTGGTTTTAGTTTAGTTCAAATTT 57.707 29.630 0.00 0.00 0.00 1.82
6743 7425 9.291664 TCGTGGTTTTAGTTTAGTTCAAATTTG 57.708 29.630 12.15 12.15 0.00 2.32
6744 7426 9.291664 CGTGGTTTTAGTTTAGTTCAAATTTGA 57.708 29.630 16.91 16.91 34.92 2.69
6758 7440 7.743520 TTCAAATTTGAACTAAAACCACGAC 57.256 32.000 26.01 0.00 41.88 4.34
6759 7441 6.853720 TCAAATTTGAACTAAAACCACGACA 58.146 32.000 18.45 0.00 33.55 4.35
6760 7442 7.313646 TCAAATTTGAACTAAAACCACGACAA 58.686 30.769 18.45 0.00 33.55 3.18
6761 7443 7.486551 TCAAATTTGAACTAAAACCACGACAAG 59.513 33.333 18.45 0.00 33.55 3.16
6762 7444 5.883503 TTTGAACTAAAACCACGACAAGT 57.116 34.783 0.00 0.00 0.00 3.16
6763 7445 6.981762 TTTGAACTAAAACCACGACAAGTA 57.018 33.333 0.00 0.00 0.00 2.24
6764 7446 6.981762 TTGAACTAAAACCACGACAAGTAA 57.018 33.333 0.00 0.00 0.00 2.24
6765 7447 6.981762 TGAACTAAAACCACGACAAGTAAA 57.018 33.333 0.00 0.00 0.00 2.01
6766 7448 7.556733 TGAACTAAAACCACGACAAGTAAAT 57.443 32.000 0.00 0.00 0.00 1.40
6767 7449 7.632721 TGAACTAAAACCACGACAAGTAAATC 58.367 34.615 0.00 0.00 0.00 2.17
6768 7450 6.219302 ACTAAAACCACGACAAGTAAATCG 57.781 37.500 0.00 0.00 43.97 3.34
6769 7451 4.477302 AAAACCACGACAAGTAAATCGG 57.523 40.909 0.00 0.00 42.67 4.18
6770 7452 3.389925 AACCACGACAAGTAAATCGGA 57.610 42.857 0.00 0.00 42.67 4.55
6771 7453 3.389925 ACCACGACAAGTAAATCGGAA 57.610 42.857 0.00 0.00 42.67 4.30
6772 7454 3.062042 ACCACGACAAGTAAATCGGAAC 58.938 45.455 0.00 0.00 42.67 3.62
7049 7732 6.710295 TGTATCCAGTGATATGCATTTGGTAC 59.290 38.462 3.54 10.49 35.94 3.34
7090 7773 8.697507 ATTTCTCTCTAAACATGGTCAAAGTT 57.302 30.769 0.00 0.00 0.00 2.66
7091 7774 8.519799 TTTCTCTCTAAACATGGTCAAAGTTT 57.480 30.769 0.00 0.00 38.79 2.66
7092 7775 7.496529 TCTCTCTAAACATGGTCAAAGTTTG 57.503 36.000 9.44 9.44 36.29 2.93
7093 7776 6.017109 TCTCTCTAAACATGGTCAAAGTTTGC 60.017 38.462 10.90 6.16 36.29 3.68
7094 7777 5.592282 TCTCTAAACATGGTCAAAGTTTGCA 59.408 36.000 10.90 4.65 36.29 4.08
7095 7778 6.096141 TCTCTAAACATGGTCAAAGTTTGCAA 59.904 34.615 10.90 0.00 36.29 4.08
7096 7779 6.634805 TCTAAACATGGTCAAAGTTTGCAAA 58.365 32.000 8.05 8.05 36.29 3.68
7097 7780 5.799681 AAACATGGTCAAAGTTTGCAAAG 57.200 34.783 13.26 0.43 34.47 2.77
7098 7781 4.470334 ACATGGTCAAAGTTTGCAAAGT 57.530 36.364 13.26 13.59 0.00 2.66
7515 8216 8.818057 ACTTTTGTCGCATATAGTCTATGTTTC 58.182 33.333 2.37 0.00 0.00 2.78
7714 8415 3.316308 CCAGAAAGGAGTTGTTGGTCTTG 59.684 47.826 0.00 0.00 41.22 3.02
7855 8556 0.331616 GGGAATAGCACTTGGTGGGT 59.668 55.000 0.00 0.00 33.64 4.51
7934 8635 7.253750 GCAATTGCACAAGTAAGTATGTAATGC 60.254 37.037 25.36 0.00 41.59 3.56
7954 8655 9.134734 GTAATGCGGAATTTGATTGTTTTCTTA 57.865 29.630 0.00 0.00 0.00 2.10
7980 8681 3.057969 TCTGTTGCGACCATGATTCTT 57.942 42.857 0.45 0.00 0.00 2.52
7990 8691 4.436050 CGACCATGATTCTTTTCTTCCACG 60.436 45.833 0.00 0.00 0.00 4.94
8007 8712 1.574147 CGCGCAAACATACACGTCG 60.574 57.895 8.75 0.00 0.00 5.12
8012 8717 0.784250 CAAACATACACGTCGTGCGC 60.784 55.000 24.80 0.00 46.11 6.09
8323 9028 0.471211 TGGACAGGAAGAGGTTCGGT 60.471 55.000 0.00 0.00 32.92 4.69
8509 9214 3.001406 GTCCACGGCCCCTACTGT 61.001 66.667 0.00 0.00 0.00 3.55
8633 9338 0.606604 GACCGAGGCCAGTTAGAACA 59.393 55.000 5.01 0.00 0.00 3.18
8748 9455 5.008712 GGCTATTATTACTGAAACCTGCACC 59.991 44.000 0.00 0.00 0.00 5.01
8771 9478 5.740569 CCGTGCTGTCTAATTTGATGAAATG 59.259 40.000 0.00 0.00 31.83 2.32
8812 9519 6.952773 TTGTTATATGGTTGGTATGCTTCC 57.047 37.500 0.00 0.00 0.00 3.46
8816 9523 1.816074 TGGTTGGTATGCTTCCGTTC 58.184 50.000 0.00 0.00 0.00 3.95
8821 9528 4.439057 GTTGGTATGCTTCCGTTCTGATA 58.561 43.478 0.00 0.00 0.00 2.15
8837 9544 3.131046 TCTGATATTCAGCGTTGCTCTGA 59.869 43.478 0.00 0.00 43.95 3.27
8838 9545 3.190079 TGATATTCAGCGTTGCTCTGAC 58.810 45.455 0.00 0.00 39.99 3.51
8839 9546 3.118992 TGATATTCAGCGTTGCTCTGACT 60.119 43.478 0.00 0.00 39.99 3.41
8840 9547 1.436600 ATTCAGCGTTGCTCTGACTG 58.563 50.000 0.00 0.00 39.99 3.51
8842 9549 1.667191 CAGCGTTGCTCTGACTGCT 60.667 57.895 0.00 0.00 36.40 4.24
8843 9550 0.389037 CAGCGTTGCTCTGACTGCTA 60.389 55.000 0.00 0.00 36.40 3.49
8844 9551 0.108898 AGCGTTGCTCTGACTGCTAG 60.109 55.000 0.00 0.00 30.62 3.42
8845 9552 0.109086 GCGTTGCTCTGACTGCTAGA 60.109 55.000 0.00 0.00 0.00 2.43
8846 9553 1.670087 GCGTTGCTCTGACTGCTAGAA 60.670 52.381 0.00 0.00 0.00 2.10
8847 9554 2.677199 CGTTGCTCTGACTGCTAGAAA 58.323 47.619 0.00 0.00 0.00 2.52
8848 9555 2.410053 CGTTGCTCTGACTGCTAGAAAC 59.590 50.000 0.00 0.00 0.00 2.78
8849 9556 3.393800 GTTGCTCTGACTGCTAGAAACA 58.606 45.455 0.00 0.00 0.00 2.83
8850 9557 3.309961 TGCTCTGACTGCTAGAAACAG 57.690 47.619 0.00 0.00 41.08 3.16
8851 9558 2.028658 TGCTCTGACTGCTAGAAACAGG 60.029 50.000 0.00 0.00 39.55 4.00
8852 9559 2.028567 GCTCTGACTGCTAGAAACAGGT 60.029 50.000 0.00 0.00 39.55 4.00
8853 9560 3.583806 CTCTGACTGCTAGAAACAGGTG 58.416 50.000 0.00 0.00 39.55 4.00
8854 9561 2.072298 CTGACTGCTAGAAACAGGTGC 58.928 52.381 0.00 0.00 39.55 5.01
8855 9562 1.416030 TGACTGCTAGAAACAGGTGCA 59.584 47.619 0.00 0.00 39.55 4.57
8856 9563 2.158827 TGACTGCTAGAAACAGGTGCAA 60.159 45.455 0.00 0.00 39.55 4.08
8857 9564 3.077359 GACTGCTAGAAACAGGTGCAAT 58.923 45.455 0.00 0.00 39.55 3.56
8858 9565 2.816087 ACTGCTAGAAACAGGTGCAATG 59.184 45.455 0.00 0.00 39.55 2.82
8859 9566 1.541147 TGCTAGAAACAGGTGCAATGC 59.459 47.619 0.00 0.00 0.00 3.56
8860 9567 1.135286 GCTAGAAACAGGTGCAATGCC 60.135 52.381 1.53 0.00 0.00 4.40
8861 9568 1.474077 CTAGAAACAGGTGCAATGCCC 59.526 52.381 1.53 3.51 0.00 5.36
8862 9569 0.469705 AGAAACAGGTGCAATGCCCA 60.470 50.000 13.69 0.00 0.00 5.36
8863 9570 0.609662 GAAACAGGTGCAATGCCCAT 59.390 50.000 13.69 0.00 0.00 4.00
8864 9571 0.322322 AAACAGGTGCAATGCCCATG 59.678 50.000 13.69 8.05 0.00 3.66
8865 9572 0.542467 AACAGGTGCAATGCCCATGA 60.542 50.000 9.58 0.00 0.00 3.07
8866 9573 0.542467 ACAGGTGCAATGCCCATGAA 60.542 50.000 9.58 0.00 0.00 2.57
8867 9574 0.609151 CAGGTGCAATGCCCATGAAA 59.391 50.000 13.69 0.00 0.00 2.69
8868 9575 1.002201 CAGGTGCAATGCCCATGAAAA 59.998 47.619 13.69 0.00 0.00 2.29
8869 9576 1.698532 AGGTGCAATGCCCATGAAAAA 59.301 42.857 13.69 0.00 0.00 1.94
8900 9650 4.420168 GTGCAATGCGTATTTACCATTGT 58.580 39.130 20.57 0.00 41.53 2.71
8901 9651 5.449314 GGTGCAATGCGTATTTACCATTGTA 60.449 40.000 18.55 17.11 41.53 2.41
8914 9664 7.542534 TTTACCATTGTATAGCCTTGTTACG 57.457 36.000 0.00 0.00 0.00 3.18
8916 9666 5.493809 ACCATTGTATAGCCTTGTTACGTT 58.506 37.500 0.00 0.00 0.00 3.99
8930 9680 3.312973 TGTTACGTTTCGAGGTTGCAATT 59.687 39.130 0.59 0.00 0.00 2.32
8937 9687 2.020720 TCGAGGTTGCAATTTGTGTGT 58.979 42.857 0.59 0.00 0.00 3.72
8938 9688 2.032799 TCGAGGTTGCAATTTGTGTGTC 59.967 45.455 0.59 0.00 0.00 3.67
8945 9696 6.015180 AGGTTGCAATTTGTGTGTCATAATCT 60.015 34.615 0.59 0.00 0.00 2.40
8959 9710 7.173218 TGTGTCATAATCTTCACCTTTCTGAAC 59.827 37.037 0.00 0.00 0.00 3.18
8972 9725 0.325933 TCTGAACCCCACTCATGCTG 59.674 55.000 0.00 0.00 0.00 4.41
8974 9727 2.360350 AACCCCACTCATGCTGCG 60.360 61.111 0.00 0.00 0.00 5.18
8979 9732 2.338015 CCACTCATGCTGCGCCTTT 61.338 57.895 4.18 0.00 0.00 3.11
8980 9733 1.582968 CACTCATGCTGCGCCTTTT 59.417 52.632 4.18 0.00 0.00 2.27
8981 9734 0.038892 CACTCATGCTGCGCCTTTTT 60.039 50.000 4.18 0.00 0.00 1.94
9016 9769 1.164411 CGGGCTGCAACTTCACAATA 58.836 50.000 0.50 0.00 0.00 1.90
9025 9778 4.201901 TGCAACTTCACAATACATATGCCG 60.202 41.667 1.58 0.00 0.00 5.69
9026 9779 4.789481 GCAACTTCACAATACATATGCCGG 60.789 45.833 1.58 0.00 0.00 6.13
9027 9780 2.878406 ACTTCACAATACATATGCCGGC 59.122 45.455 22.73 22.73 0.00 6.13
9028 9781 2.928801 TCACAATACATATGCCGGCT 57.071 45.000 29.70 15.76 0.00 5.52
9029 9782 3.207265 TCACAATACATATGCCGGCTT 57.793 42.857 29.70 24.47 0.00 4.35
9030 9783 4.344359 TCACAATACATATGCCGGCTTA 57.656 40.909 29.70 25.95 0.00 3.09
9031 9784 4.314961 TCACAATACATATGCCGGCTTAG 58.685 43.478 29.70 19.61 0.00 2.18
9032 9785 4.065088 CACAATACATATGCCGGCTTAGT 58.935 43.478 29.70 23.55 0.00 2.24
9033 9786 4.152402 CACAATACATATGCCGGCTTAGTC 59.848 45.833 29.70 0.00 0.00 2.59
9034 9787 4.040461 ACAATACATATGCCGGCTTAGTCT 59.960 41.667 29.70 14.10 0.00 3.24
9035 9788 4.891992 ATACATATGCCGGCTTAGTCTT 57.108 40.909 29.70 12.92 0.00 3.01
9036 9789 3.560636 ACATATGCCGGCTTAGTCTTT 57.439 42.857 29.70 7.30 0.00 2.52
9037 9790 3.467803 ACATATGCCGGCTTAGTCTTTC 58.532 45.455 29.70 0.00 0.00 2.62
9038 9791 2.218953 TATGCCGGCTTAGTCTTTCG 57.781 50.000 29.70 0.00 0.00 3.46
9039 9792 0.535335 ATGCCGGCTTAGTCTTTCGA 59.465 50.000 29.70 1.81 0.00 3.71
9040 9793 0.319083 TGCCGGCTTAGTCTTTCGAA 59.681 50.000 29.70 0.00 0.00 3.71
9041 9794 1.000145 GCCGGCTTAGTCTTTCGAAG 59.000 55.000 22.15 0.00 33.06 3.79
9042 9795 1.403780 GCCGGCTTAGTCTTTCGAAGA 60.404 52.381 22.15 0.00 31.87 2.87
9043 9796 2.738964 GCCGGCTTAGTCTTTCGAAGAT 60.739 50.000 22.15 0.00 40.18 2.40
9044 9797 2.860735 CCGGCTTAGTCTTTCGAAGATG 59.139 50.000 0.00 0.00 40.18 2.90
9045 9798 2.282820 CGGCTTAGTCTTTCGAAGATGC 59.717 50.000 0.00 0.00 40.18 3.91
9046 9799 3.526534 GGCTTAGTCTTTCGAAGATGCT 58.473 45.455 0.00 0.00 40.18 3.79
9047 9800 3.935828 GGCTTAGTCTTTCGAAGATGCTT 59.064 43.478 0.00 0.00 40.18 3.91
9048 9801 5.109903 GGCTTAGTCTTTCGAAGATGCTTA 58.890 41.667 0.00 0.00 40.18 3.09
9049 9802 5.755861 GGCTTAGTCTTTCGAAGATGCTTAT 59.244 40.000 0.00 0.00 40.18 1.73
9050 9803 6.924060 GGCTTAGTCTTTCGAAGATGCTTATA 59.076 38.462 0.00 0.00 40.18 0.98
9051 9804 7.115663 GGCTTAGTCTTTCGAAGATGCTTATAG 59.884 40.741 0.00 0.00 40.18 1.31
9052 9805 7.115663 GCTTAGTCTTTCGAAGATGCTTATAGG 59.884 40.741 0.00 0.00 40.18 2.57
9053 9806 5.848406 AGTCTTTCGAAGATGCTTATAGGG 58.152 41.667 0.00 0.00 40.18 3.53
9054 9807 5.364157 AGTCTTTCGAAGATGCTTATAGGGT 59.636 40.000 0.00 0.00 40.18 4.34
9055 9808 6.550108 AGTCTTTCGAAGATGCTTATAGGGTA 59.450 38.462 0.00 0.00 40.18 3.69
9056 9809 6.864165 GTCTTTCGAAGATGCTTATAGGGTAG 59.136 42.308 0.00 0.00 40.18 3.18
9057 9810 5.723672 TTCGAAGATGCTTATAGGGTAGG 57.276 43.478 0.00 0.00 35.04 3.18
9058 9811 4.087182 TCGAAGATGCTTATAGGGTAGGG 58.913 47.826 0.00 0.00 0.00 3.53
9059 9812 3.833070 CGAAGATGCTTATAGGGTAGGGT 59.167 47.826 0.00 0.00 0.00 4.34
9060 9813 4.322049 CGAAGATGCTTATAGGGTAGGGTG 60.322 50.000 0.00 0.00 0.00 4.61
9061 9814 4.214993 AGATGCTTATAGGGTAGGGTGT 57.785 45.455 0.00 0.00 0.00 4.16
9062 9815 5.349738 AGATGCTTATAGGGTAGGGTGTA 57.650 43.478 0.00 0.00 0.00 2.90
9063 9816 5.085219 AGATGCTTATAGGGTAGGGTGTAC 58.915 45.833 0.00 0.00 0.00 2.90
9064 9817 3.225104 TGCTTATAGGGTAGGGTGTACG 58.775 50.000 0.00 0.00 0.00 3.67
9065 9818 3.225940 GCTTATAGGGTAGGGTGTACGT 58.774 50.000 0.00 0.00 0.00 3.57
9066 9819 3.005155 GCTTATAGGGTAGGGTGTACGTG 59.995 52.174 0.00 0.00 0.00 4.49
9067 9820 2.834638 ATAGGGTAGGGTGTACGTGT 57.165 50.000 0.00 0.00 0.00 4.49
9068 9821 1.838112 TAGGGTAGGGTGTACGTGTG 58.162 55.000 0.00 0.00 0.00 3.82
9069 9822 0.178953 AGGGTAGGGTGTACGTGTGT 60.179 55.000 0.00 0.00 0.00 3.72
9070 9823 0.037975 GGGTAGGGTGTACGTGTGTG 60.038 60.000 0.00 0.00 0.00 3.82
9071 9824 0.668401 GGTAGGGTGTACGTGTGTGC 60.668 60.000 0.00 0.00 0.00 4.57
9072 9825 0.668401 GTAGGGTGTACGTGTGTGCC 60.668 60.000 0.00 0.00 0.00 5.01
9073 9826 0.828762 TAGGGTGTACGTGTGTGCCT 60.829 55.000 0.00 0.00 0.00 4.75
9074 9827 1.227734 GGGTGTACGTGTGTGCCTT 60.228 57.895 0.00 0.00 0.00 4.35
9075 9828 0.816421 GGGTGTACGTGTGTGCCTTT 60.816 55.000 0.00 0.00 0.00 3.11
9076 9829 1.540797 GGGTGTACGTGTGTGCCTTTA 60.541 52.381 0.00 0.00 0.00 1.85
9077 9830 2.419667 GGTGTACGTGTGTGCCTTTAT 58.580 47.619 0.00 0.00 0.00 1.40
9078 9831 3.587923 GGTGTACGTGTGTGCCTTTATA 58.412 45.455 0.00 0.00 0.00 0.98
9079 9832 3.615496 GGTGTACGTGTGTGCCTTTATAG 59.385 47.826 0.00 0.00 0.00 1.31
9080 9833 3.615496 GTGTACGTGTGTGCCTTTATAGG 59.385 47.826 0.00 0.00 45.02 2.57
9081 9834 3.510753 TGTACGTGTGTGCCTTTATAGGA 59.489 43.478 3.01 0.00 45.05 2.94
9082 9835 3.247006 ACGTGTGTGCCTTTATAGGAG 57.753 47.619 3.01 0.00 45.05 3.69
9083 9836 2.565834 ACGTGTGTGCCTTTATAGGAGT 59.434 45.455 3.01 0.00 45.05 3.85
9084 9837 3.765511 ACGTGTGTGCCTTTATAGGAGTA 59.234 43.478 3.01 0.00 45.05 2.59
9085 9838 4.221262 ACGTGTGTGCCTTTATAGGAGTAA 59.779 41.667 3.01 0.00 45.05 2.24
9086 9839 4.804139 CGTGTGTGCCTTTATAGGAGTAAG 59.196 45.833 3.01 0.00 45.05 2.34
9087 9840 5.623824 CGTGTGTGCCTTTATAGGAGTAAGT 60.624 44.000 3.01 0.00 45.05 2.24
9088 9841 5.581085 GTGTGTGCCTTTATAGGAGTAAGTG 59.419 44.000 3.01 0.00 45.05 3.16
9089 9842 5.247564 TGTGTGCCTTTATAGGAGTAAGTGT 59.752 40.000 3.01 0.00 45.05 3.55
9090 9843 6.438108 TGTGTGCCTTTATAGGAGTAAGTGTA 59.562 38.462 3.01 0.00 45.05 2.90
9091 9844 7.125204 TGTGTGCCTTTATAGGAGTAAGTGTAT 59.875 37.037 3.01 0.00 45.05 2.29
9092 9845 7.438459 GTGTGCCTTTATAGGAGTAAGTGTATG 59.562 40.741 3.01 0.00 45.05 2.39
9093 9846 6.424207 GTGCCTTTATAGGAGTAAGTGTATGC 59.576 42.308 3.01 0.00 45.05 3.14
9094 9847 5.634020 GCCTTTATAGGAGTAAGTGTATGCG 59.366 44.000 3.01 0.00 45.05 4.73
9095 9848 5.634020 CCTTTATAGGAGTAAGTGTATGCGC 59.366 44.000 0.00 0.00 45.05 6.09
9096 9849 2.768833 TAGGAGTAAGTGTATGCGCG 57.231 50.000 0.00 0.00 0.00 6.86
9097 9850 0.815734 AGGAGTAAGTGTATGCGCGT 59.184 50.000 8.43 7.55 0.00 6.01
9098 9851 0.921347 GGAGTAAGTGTATGCGCGTG 59.079 55.000 13.61 0.00 0.00 5.34
9099 9852 1.625616 GAGTAAGTGTATGCGCGTGT 58.374 50.000 13.61 0.00 0.00 4.49
9100 9853 2.478370 GGAGTAAGTGTATGCGCGTGTA 60.478 50.000 13.61 0.00 0.00 2.90
9101 9854 3.369385 GAGTAAGTGTATGCGCGTGTAT 58.631 45.455 13.61 4.63 0.00 2.29
9102 9855 4.530388 GAGTAAGTGTATGCGCGTGTATA 58.470 43.478 13.61 2.40 0.00 1.47
9103 9856 5.117355 AGTAAGTGTATGCGCGTGTATAT 57.883 39.130 13.61 0.00 0.00 0.86
9104 9857 4.915667 AGTAAGTGTATGCGCGTGTATATG 59.084 41.667 13.61 0.00 0.00 1.78
9105 9858 3.636282 AGTGTATGCGCGTGTATATGA 57.364 42.857 13.61 0.00 0.00 2.15
9106 9859 3.565516 AGTGTATGCGCGTGTATATGAG 58.434 45.455 13.61 0.00 0.00 2.90
9107 9860 2.090658 GTGTATGCGCGTGTATATGAGC 59.909 50.000 13.61 0.41 38.85 4.26
9110 9863 4.228451 CGCGTGTATATGAGCGCT 57.772 55.556 11.27 11.27 46.56 5.92
9111 9864 2.506544 CGCGTGTATATGAGCGCTT 58.493 52.632 13.26 0.00 46.56 4.68
9112 9865 0.159554 CGCGTGTATATGAGCGCTTG 59.840 55.000 13.26 0.00 46.56 4.01
9113 9866 0.111089 GCGTGTATATGAGCGCTTGC 60.111 55.000 13.26 0.00 45.48 4.01
9114 9867 0.159554 CGTGTATATGAGCGCTTGCG 59.840 55.000 13.26 10.90 45.69 4.85
9115 9868 1.209128 GTGTATATGAGCGCTTGCGT 58.791 50.000 13.26 3.24 45.69 5.24
9116 9869 1.190323 GTGTATATGAGCGCTTGCGTC 59.810 52.381 13.26 12.36 45.69 5.19
9117 9870 1.067060 TGTATATGAGCGCTTGCGTCT 59.933 47.619 13.26 13.17 45.69 4.18
9118 9871 1.453524 GTATATGAGCGCTTGCGTCTG 59.546 52.381 13.26 0.00 45.69 3.51
9119 9872 0.179100 ATATGAGCGCTTGCGTCTGT 60.179 50.000 13.26 7.66 45.69 3.41
9120 9873 0.454196 TATGAGCGCTTGCGTCTGTA 59.546 50.000 13.26 6.26 45.69 2.74
9121 9874 0.389817 ATGAGCGCTTGCGTCTGTAA 60.390 50.000 13.26 3.57 45.69 2.41
9122 9875 0.389817 TGAGCGCTTGCGTCTGTAAT 60.390 50.000 13.26 0.00 45.69 1.89
9123 9876 0.025513 GAGCGCTTGCGTCTGTAATG 59.974 55.000 13.26 0.00 45.69 1.90
9124 9877 0.670546 AGCGCTTGCGTCTGTAATGT 60.671 50.000 16.38 0.00 45.69 2.71
9125 9878 0.519175 GCGCTTGCGTCTGTAATGTG 60.519 55.000 16.38 0.00 0.00 3.21
9126 9879 0.790207 CGCTTGCGTCTGTAATGTGT 59.210 50.000 6.86 0.00 0.00 3.72
9127 9880 1.194547 CGCTTGCGTCTGTAATGTGTT 59.805 47.619 6.86 0.00 0.00 3.32
9128 9881 2.410392 CGCTTGCGTCTGTAATGTGTTA 59.590 45.455 6.86 0.00 0.00 2.41
9129 9882 3.120820 CGCTTGCGTCTGTAATGTGTTAA 60.121 43.478 6.86 0.00 0.00 2.01
9130 9883 4.609559 CGCTTGCGTCTGTAATGTGTTAAA 60.610 41.667 6.86 0.00 0.00 1.52
9131 9884 5.209240 GCTTGCGTCTGTAATGTGTTAAAA 58.791 37.500 0.00 0.00 0.00 1.52
9132 9885 5.683743 GCTTGCGTCTGTAATGTGTTAAAAA 59.316 36.000 0.00 0.00 0.00 1.94
9159 9912 4.142315 ACATATGTCACATTTTCTGCCAGC 60.142 41.667 1.41 0.00 0.00 4.85
9180 9933 5.768333 GCTTTTGCAAGATAATTGACACC 57.232 39.130 0.00 0.00 46.58 4.16
9184 9937 7.362056 GCTTTTGCAAGATAATTGACACCTCTA 60.362 37.037 0.00 0.00 46.58 2.43
9187 9940 6.653020 TGCAAGATAATTGACACCTCTATGT 58.347 36.000 0.00 0.00 34.78 2.29
9189 9942 7.280876 TGCAAGATAATTGACACCTCTATGTTC 59.719 37.037 0.00 0.00 31.24 3.18
9195 9948 3.064207 TGACACCTCTATGTTCGCAAAC 58.936 45.455 0.00 0.00 35.85 2.93
9215 9968 6.089954 GCAAACACAGAAATTCCTTGCTAATC 59.910 38.462 0.00 0.00 35.85 1.75
9221 9974 5.356190 CAGAAATTCCTTGCTAATCTGCTCA 59.644 40.000 0.00 0.00 0.00 4.26
9245 9998 4.067896 TGCTCACTGTCAAATTCTCCTTC 58.932 43.478 0.00 0.00 0.00 3.46
9246 9999 4.202398 TGCTCACTGTCAAATTCTCCTTCT 60.202 41.667 0.00 0.00 0.00 2.85
9247 10000 4.391523 GCTCACTGTCAAATTCTCCTTCTC 59.608 45.833 0.00 0.00 0.00 2.87
9248 10001 5.545588 CTCACTGTCAAATTCTCCTTCTCA 58.454 41.667 0.00 0.00 0.00 3.27
9249 10002 5.928976 TCACTGTCAAATTCTCCTTCTCAA 58.071 37.500 0.00 0.00 0.00 3.02
9265 10018 5.765182 CCTTCTCAAAAACACACATACCTCT 59.235 40.000 0.00 0.00 0.00 3.69
9289 10042 5.544441 TTAATTGAAATCCCCCTCTTGGA 57.456 39.130 0.00 0.00 35.39 3.53
9291 10044 3.669939 TTGAAATCCCCCTCTTGGATC 57.330 47.619 0.00 0.00 41.80 3.36
9295 10048 0.988145 ATCCCCCTCTTGGATCGCAA 60.988 55.000 0.00 0.00 38.20 4.85
9304 10057 4.635765 CCTCTTGGATCGCAATTTCACTTA 59.364 41.667 0.00 0.00 34.57 2.24
9322 10075 6.444633 TCACTTAGAGTAACAAAAGAGACCG 58.555 40.000 0.00 0.00 0.00 4.79
9323 10076 6.263842 TCACTTAGAGTAACAAAAGAGACCGA 59.736 38.462 0.00 0.00 0.00 4.69
9336 10089 1.550976 GAGACCGACTGTCCTTGGAAT 59.449 52.381 7.14 0.00 45.68 3.01
9348 10101 9.178758 GACTGTCCTTGGAATGAATTAATAGTT 57.821 33.333 0.00 0.00 0.00 2.24
9349 10102 8.960591 ACTGTCCTTGGAATGAATTAATAGTTG 58.039 33.333 0.00 0.00 0.00 3.16
9350 10103 9.177608 CTGTCCTTGGAATGAATTAATAGTTGA 57.822 33.333 0.00 0.00 0.00 3.18
9351 10104 9.527157 TGTCCTTGGAATGAATTAATAGTTGAA 57.473 29.630 0.00 0.00 0.00 2.69
9368 10121 6.705863 AGTTGAATATTCATTTCAGAGCCC 57.294 37.500 18.61 0.00 37.00 5.19
9369 10122 5.297776 AGTTGAATATTCATTTCAGAGCCCG 59.702 40.000 18.61 0.00 37.00 6.13
9371 10124 5.059161 TGAATATTCATTTCAGAGCCCGAG 58.941 41.667 14.23 0.00 31.01 4.63
9372 10125 1.673168 ATTCATTTCAGAGCCCGAGC 58.327 50.000 0.00 0.00 40.32 5.03
9373 10126 8.593134 TGAATATTCATTTCAGAGCCCGAGCT 62.593 42.308 14.23 0.00 41.94 4.09
9383 10136 2.898738 CCCGAGCTCATCTGCACT 59.101 61.111 15.40 0.00 34.99 4.40
9384 10137 1.227205 CCCGAGCTCATCTGCACTC 60.227 63.158 15.40 0.00 34.99 3.51
9385 10138 1.674764 CCCGAGCTCATCTGCACTCT 61.675 60.000 15.40 0.00 34.99 3.24
9386 10139 1.028130 CCGAGCTCATCTGCACTCTA 58.972 55.000 15.40 0.00 34.99 2.43
9387 10140 1.612950 CCGAGCTCATCTGCACTCTAT 59.387 52.381 15.40 0.00 34.99 1.98
9388 10141 2.607526 CCGAGCTCATCTGCACTCTATG 60.608 54.545 15.40 0.00 34.99 2.23
9391 10859 4.050553 GAGCTCATCTGCACTCTATGAAC 58.949 47.826 9.40 0.00 34.99 3.18
9394 10862 4.680172 GCTCATCTGCACTCTATGAACAGT 60.680 45.833 0.00 0.00 0.00 3.55
9464 10932 3.625745 GGAAGATGTTCCCGTGTGT 57.374 52.632 10.58 0.00 46.11 3.72
9465 10933 1.156736 GGAAGATGTTCCCGTGTGTG 58.843 55.000 10.58 0.00 46.11 3.82
9466 10934 1.270625 GGAAGATGTTCCCGTGTGTGA 60.271 52.381 10.58 0.00 46.11 3.58
9467 10935 2.069273 GAAGATGTTCCCGTGTGTGAG 58.931 52.381 0.00 0.00 0.00 3.51
9469 10937 1.902508 AGATGTTCCCGTGTGTGAGAT 59.097 47.619 0.00 0.00 0.00 2.75
9470 10938 2.093973 AGATGTTCCCGTGTGTGAGATC 60.094 50.000 0.00 0.00 0.00 2.75
9471 10939 0.320374 TGTTCCCGTGTGTGAGATCC 59.680 55.000 0.00 0.00 0.00 3.36
9473 10941 1.183030 TTCCCGTGTGTGAGATCCGT 61.183 55.000 0.00 0.00 0.00 4.69
9476 10944 2.094659 CGTGTGTGAGATCCGTGCC 61.095 63.158 0.00 0.00 0.00 5.01
9479 10947 0.107643 TGTGTGAGATCCGTGCCAAA 59.892 50.000 0.00 0.00 0.00 3.28
9481 10949 1.812571 GTGTGAGATCCGTGCCAAATT 59.187 47.619 0.00 0.00 0.00 1.82
9482 10950 2.228822 GTGTGAGATCCGTGCCAAATTT 59.771 45.455 0.00 0.00 0.00 1.82
9483 10951 2.487762 TGTGAGATCCGTGCCAAATTTC 59.512 45.455 0.00 0.00 0.00 2.17
9484 10952 2.487762 GTGAGATCCGTGCCAAATTTCA 59.512 45.455 0.00 0.00 0.00 2.69
9485 10953 2.749076 TGAGATCCGTGCCAAATTTCAG 59.251 45.455 0.00 0.00 0.00 3.02
9487 10955 1.818674 GATCCGTGCCAAATTTCAGGT 59.181 47.619 0.00 0.00 0.00 4.00
9489 10957 0.109781 CCGTGCCAAATTTCAGGTCG 60.110 55.000 0.00 0.00 0.00 4.79
9490 10958 0.591170 CGTGCCAAATTTCAGGTCGT 59.409 50.000 0.00 0.00 0.00 4.34
9491 10959 1.001815 CGTGCCAAATTTCAGGTCGTT 60.002 47.619 0.00 0.00 0.00 3.85
9508 10976 4.683832 GTCGTTTGGACATATGAGTAGCT 58.316 43.478 10.38 0.00 45.36 3.32
9510 10978 4.645136 TCGTTTGGACATATGAGTAGCTCT 59.355 41.667 10.38 0.00 0.00 4.09
9511 10979 4.979197 CGTTTGGACATATGAGTAGCTCTC 59.021 45.833 10.38 0.00 43.03 3.20
9542 11010 6.627395 AACAAAATCTGTCCGAACAATACA 57.373 33.333 0.00 0.00 37.23 2.29
9543 11011 5.997385 ACAAAATCTGTCCGAACAATACAC 58.003 37.500 0.00 0.00 34.24 2.90
9544 11012 5.763204 ACAAAATCTGTCCGAACAATACACT 59.237 36.000 0.00 0.00 34.24 3.55
9545 11013 5.862924 AAATCTGTCCGAACAATACACTG 57.137 39.130 0.00 0.00 34.24 3.66
9546 11014 4.537135 ATCTGTCCGAACAATACACTGT 57.463 40.909 0.00 0.00 34.24 3.55
9547 11015 4.330944 TCTGTCCGAACAATACACTGTT 57.669 40.909 0.00 0.00 42.23 3.16
9548 11016 4.699637 TCTGTCCGAACAATACACTGTTT 58.300 39.130 0.00 0.00 39.63 2.83
9550 11018 4.443621 TGTCCGAACAATACACTGTTTCA 58.556 39.130 0.00 0.00 39.63 2.69
9551 11019 4.271533 TGTCCGAACAATACACTGTTTCAC 59.728 41.667 0.00 0.00 39.63 3.18
9553 11021 5.049680 GTCCGAACAATACACTGTTTCACAT 60.050 40.000 0.00 0.00 39.63 3.21
9554 11022 6.146510 GTCCGAACAATACACTGTTTCACATA 59.853 38.462 0.00 0.00 39.63 2.29
9555 11023 6.146510 TCCGAACAATACACTGTTTCACATAC 59.853 38.462 0.00 0.00 39.63 2.39
9556 11024 6.304126 CGAACAATACACTGTTTCACATACC 58.696 40.000 0.00 0.00 39.63 2.73
9557 11025 6.147164 CGAACAATACACTGTTTCACATACCT 59.853 38.462 0.00 0.00 39.63 3.08
9558 11026 7.435068 AACAATACACTGTTTCACATACCTC 57.565 36.000 0.00 0.00 36.05 3.85
9559 11027 6.530120 ACAATACACTGTTTCACATACCTCA 58.470 36.000 0.00 0.00 0.00 3.86
9562 11030 8.514594 CAATACACTGTTTCACATACCTCAAAT 58.485 33.333 0.00 0.00 0.00 2.32
9563 11031 6.959639 ACACTGTTTCACATACCTCAAATT 57.040 33.333 0.00 0.00 0.00 1.82
9564 11032 7.346751 ACACTGTTTCACATACCTCAAATTT 57.653 32.000 0.00 0.00 0.00 1.82
9565 11033 8.458573 ACACTGTTTCACATACCTCAAATTTA 57.541 30.769 0.00 0.00 0.00 1.40
9588 11056 1.808411 TTTTTGCTGAGAGCTACCCG 58.192 50.000 0.00 0.00 42.97 5.28
9589 11057 0.036388 TTTTGCTGAGAGCTACCCGG 60.036 55.000 0.00 0.00 42.97 5.73
9590 11058 0.902984 TTTGCTGAGAGCTACCCGGA 60.903 55.000 0.73 0.00 42.97 5.14
9592 11060 1.365633 GCTGAGAGCTACCCGGATG 59.634 63.158 0.73 0.00 38.45 3.51
9593 11061 1.395826 GCTGAGAGCTACCCGGATGT 61.396 60.000 0.73 0.00 38.45 3.06
9596 11064 0.755698 GAGAGCTACCCGGATGTCCA 60.756 60.000 0.73 0.00 35.14 4.02
9597 11065 0.325296 AGAGCTACCCGGATGTCCAA 60.325 55.000 0.73 0.00 35.14 3.53
9598 11066 0.539986 GAGCTACCCGGATGTCCAAA 59.460 55.000 0.73 0.00 35.14 3.28
9599 11067 1.141053 GAGCTACCCGGATGTCCAAAT 59.859 52.381 0.73 0.00 35.14 2.32
9601 11069 1.134220 GCTACCCGGATGTCCAAATGA 60.134 52.381 0.73 0.00 35.14 2.57
9603 11071 0.394352 ACCCGGATGTCCAAATGAGC 60.394 55.000 0.73 0.00 35.14 4.26
9604 11072 0.107017 CCCGGATGTCCAAATGAGCT 60.107 55.000 0.73 0.00 35.14 4.09
9605 11073 1.019673 CCGGATGTCCAAATGAGCTG 58.980 55.000 0.00 0.00 35.14 4.24
9606 11074 1.407299 CCGGATGTCCAAATGAGCTGA 60.407 52.381 0.00 0.00 35.14 4.26
9607 11075 2.358957 CGGATGTCCAAATGAGCTGAA 58.641 47.619 0.00 0.00 35.14 3.02
9609 11077 3.379372 CGGATGTCCAAATGAGCTGAAAT 59.621 43.478 0.00 0.00 35.14 2.17
9610 11078 4.142315 CGGATGTCCAAATGAGCTGAAATT 60.142 41.667 0.00 0.00 35.14 1.82
9612 11080 6.168389 GGATGTCCAAATGAGCTGAAATTTT 58.832 36.000 0.00 0.00 35.64 1.82
9613 11081 6.091713 GGATGTCCAAATGAGCTGAAATTTTG 59.908 38.462 0.00 0.00 35.64 2.44
9615 11083 4.751098 GTCCAAATGAGCTGAAATTTTGCA 59.249 37.500 15.97 0.00 0.00 4.08
9616 11084 4.751098 TCCAAATGAGCTGAAATTTTGCAC 59.249 37.500 15.97 11.61 0.00 4.57
9617 11085 4.376615 CCAAATGAGCTGAAATTTTGCACG 60.377 41.667 15.97 0.00 0.00 5.34
9618 11086 3.921119 ATGAGCTGAAATTTTGCACGA 57.079 38.095 15.97 3.76 0.00 4.35
9619 11087 3.921119 TGAGCTGAAATTTTGCACGAT 57.079 38.095 15.97 0.07 0.00 3.73
9620 11088 3.825308 TGAGCTGAAATTTTGCACGATC 58.175 40.909 15.97 7.90 0.00 3.69
9623 11091 3.119708 AGCTGAAATTTTGCACGATCCTC 60.120 43.478 15.97 0.00 0.00 3.71
9625 11093 4.159377 TGAAATTTTGCACGATCCTCAC 57.841 40.909 0.00 0.00 0.00 3.51
9627 11095 0.447801 ATTTTGCACGATCCTCACGC 59.552 50.000 0.00 0.00 0.00 5.34
9628 11096 0.882484 TTTTGCACGATCCTCACGCA 60.882 50.000 0.00 0.00 0.00 5.24
9629 11097 0.673333 TTTGCACGATCCTCACGCAT 60.673 50.000 0.00 0.00 31.67 4.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
69 81 1.108727 ACCCTACGACGTTGTGGTCA 61.109 55.000 18.98 0.00 36.73 4.02
227 242 2.741985 CATTGCACCCGAGACGCA 60.742 61.111 0.00 0.00 0.00 5.24
253 269 2.187424 CAGAGCAGAGCAGAGGGC 59.813 66.667 0.00 0.00 45.30 5.19
254 270 2.187424 GCAGAGCAGAGCAGAGGG 59.813 66.667 0.00 0.00 0.00 4.30
255 271 1.142314 GAGCAGAGCAGAGCAGAGG 59.858 63.158 0.00 0.00 0.00 3.69
256 272 1.226745 CGAGCAGAGCAGAGCAGAG 60.227 63.158 0.00 0.00 0.00 3.35
257 273 2.883621 CGAGCAGAGCAGAGCAGA 59.116 61.111 0.00 0.00 0.00 4.26
258 274 2.886604 GCGAGCAGAGCAGAGCAG 60.887 66.667 0.00 0.00 34.19 4.24
259 275 4.790861 CGCGAGCAGAGCAGAGCA 62.791 66.667 0.00 0.00 34.19 4.26
291 312 0.098200 CGATCTAACACGCGGAGACA 59.902 55.000 12.47 0.00 0.00 3.41
294 315 1.189403 GAACGATCTAACACGCGGAG 58.811 55.000 12.47 4.93 0.00 4.63
530 555 2.610859 ACAAGGGTCCCTCCGCAT 60.611 61.111 12.07 0.00 37.00 4.73
541 566 1.338105 TGACGCAGATCAAGACAAGGG 60.338 52.381 0.00 0.00 0.00 3.95
583 608 2.887360 GTCGCAAGGCAATGGCAT 59.113 55.556 10.05 0.00 45.31 4.40
592 617 2.267351 TTGGCCACATGTCGCAAGG 61.267 57.895 17.43 6.29 38.47 3.61
609 634 3.020984 ACTTTTGTGTCCAATCGTGGTT 58.979 40.909 0.00 0.00 46.11 3.67
676 701 1.182667 GGCCATTTCGCCTAAACCTT 58.817 50.000 0.00 0.00 46.10 3.50
677 702 2.882170 GGCCATTTCGCCTAAACCT 58.118 52.632 0.00 0.00 46.10 3.50
684 710 2.435938 TCAGACGGCCATTTCGCC 60.436 61.111 2.24 0.00 46.13 5.54
695 721 0.633733 GATACAACACGCGTCAGACG 59.366 55.000 19.10 19.10 45.88 4.18
735 763 5.438761 ACAATTTCCTAGACAGCAACAAC 57.561 39.130 0.00 0.00 0.00 3.32
741 863 3.191371 CCACCAACAATTTCCTAGACAGC 59.809 47.826 0.00 0.00 0.00 4.40
826 948 1.133025 CTGGCTGCAATTAAAGGACGG 59.867 52.381 0.50 0.00 0.00 4.79
865 1113 2.154462 AGAAGAGGAACATTGCAACGG 58.846 47.619 0.00 0.00 0.00 4.44
1138 1386 0.329596 GACAGCCCTCCAGATGGTTT 59.670 55.000 0.00 0.00 36.34 3.27
1695 2020 8.902806 CCCATTAAGCATTAACTTCTGTGATTA 58.097 33.333 0.00 0.00 44.35 1.75
1696 2021 7.397192 ACCCATTAAGCATTAACTTCTGTGATT 59.603 33.333 0.00 0.00 44.35 2.57
1769 2094 7.448420 AGAGACATGGATAAAGTGTCATATGG 58.552 38.462 2.13 0.00 43.51 2.74
1858 2185 3.321968 TGTTAGAGTGCTGAGAAAGAGCA 59.678 43.478 0.00 0.00 44.22 4.26
2471 2798 3.748027 GCAGGATTCCTCTCTTGCATGAT 60.748 47.826 0.98 0.00 44.93 2.45
2751 3078 5.072055 TGCTTCCAACAAAGATTGAGATCA 58.928 37.500 0.00 0.00 34.60 2.92
3399 3733 0.390472 CGCACCCAAGAAGGAGAGAC 60.390 60.000 0.00 0.00 41.22 3.36
3855 4189 3.719268 TCTGCATTACCTTGACCATGT 57.281 42.857 0.00 0.00 0.00 3.21
3881 4215 2.847327 AAGTCACCATCACCACTCAG 57.153 50.000 0.00 0.00 0.00 3.35
4190 4525 7.445707 GGGATTCCTACAGAAGTATTTTCCATC 59.554 40.741 2.01 0.00 38.07 3.51
4524 4859 9.213799 GTGAAAATTGGGCAATTAAACAGAATA 57.786 29.630 0.00 0.00 39.88 1.75
5253 5588 9.513906 TGTGGATAGTACATTTGATGAAAAAGA 57.486 29.630 0.00 0.00 0.00 2.52
6297 6661 4.019174 TGAATTCTCTTCATTTCCAGGCC 58.981 43.478 7.05 0.00 0.00 5.19
6707 7389 6.457851 AACTAAAACCACGACGAGTAAATC 57.542 37.500 0.00 0.00 0.00 2.17
6708 7390 6.849588 AAACTAAAACCACGACGAGTAAAT 57.150 33.333 0.00 0.00 0.00 1.40
6709 7391 6.978080 ACTAAACTAAAACCACGACGAGTAAA 59.022 34.615 0.00 0.00 0.00 2.01
6710 7392 6.503524 ACTAAACTAAAACCACGACGAGTAA 58.496 36.000 0.00 0.00 0.00 2.24
6711 7393 6.072112 ACTAAACTAAAACCACGACGAGTA 57.928 37.500 0.00 0.00 0.00 2.59
6712 7394 4.936891 ACTAAACTAAAACCACGACGAGT 58.063 39.130 0.00 0.00 0.00 4.18
6713 7395 5.459762 TGAACTAAACTAAAACCACGACGAG 59.540 40.000 0.00 0.00 0.00 4.18
6714 7396 5.347342 TGAACTAAACTAAAACCACGACGA 58.653 37.500 0.00 0.00 0.00 4.20
6715 7397 5.640218 TGAACTAAACTAAAACCACGACG 57.360 39.130 0.00 0.00 0.00 5.12
6716 7398 8.845942 AATTTGAACTAAACTAAAACCACGAC 57.154 30.769 0.00 0.00 0.00 4.34
6717 7399 9.291664 CAAATTTGAACTAAACTAAAACCACGA 57.708 29.630 13.08 0.00 0.00 4.35
6718 7400 9.291664 TCAAATTTGAACTAAACTAAAACCACG 57.708 29.630 18.45 0.00 33.55 4.94
6734 7416 7.313646 TGTCGTGGTTTTAGTTCAAATTTGAA 58.686 30.769 26.01 26.01 44.31 2.69
6735 7417 6.853720 TGTCGTGGTTTTAGTTCAAATTTGA 58.146 32.000 16.91 16.91 34.92 2.69
6736 7418 7.274686 ACTTGTCGTGGTTTTAGTTCAAATTTG 59.725 33.333 12.15 12.15 0.00 2.32
6737 7419 7.317390 ACTTGTCGTGGTTTTAGTTCAAATTT 58.683 30.769 0.00 0.00 0.00 1.82
6738 7420 6.859017 ACTTGTCGTGGTTTTAGTTCAAATT 58.141 32.000 0.00 0.00 0.00 1.82
6739 7421 6.445357 ACTTGTCGTGGTTTTAGTTCAAAT 57.555 33.333 0.00 0.00 0.00 2.32
6740 7422 5.883503 ACTTGTCGTGGTTTTAGTTCAAA 57.116 34.783 0.00 0.00 0.00 2.69
6741 7423 6.981762 TTACTTGTCGTGGTTTTAGTTCAA 57.018 33.333 0.00 0.00 0.00 2.69
6742 7424 6.981762 TTTACTTGTCGTGGTTTTAGTTCA 57.018 33.333 0.00 0.00 0.00 3.18
6743 7425 6.788930 CGATTTACTTGTCGTGGTTTTAGTTC 59.211 38.462 0.00 0.00 33.42 3.01
6744 7426 6.293027 CCGATTTACTTGTCGTGGTTTTAGTT 60.293 38.462 0.00 0.00 36.17 2.24
6745 7427 5.178067 CCGATTTACTTGTCGTGGTTTTAGT 59.822 40.000 0.00 0.00 36.17 2.24
6746 7428 5.406175 TCCGATTTACTTGTCGTGGTTTTAG 59.594 40.000 0.00 0.00 36.17 1.85
6747 7429 5.295950 TCCGATTTACTTGTCGTGGTTTTA 58.704 37.500 0.00 0.00 36.17 1.52
6748 7430 4.128643 TCCGATTTACTTGTCGTGGTTTT 58.871 39.130 0.00 0.00 36.17 2.43
6749 7431 3.731089 TCCGATTTACTTGTCGTGGTTT 58.269 40.909 0.00 0.00 36.17 3.27
6750 7432 3.389925 TCCGATTTACTTGTCGTGGTT 57.610 42.857 0.00 0.00 36.17 3.67
6751 7433 3.062042 GTTCCGATTTACTTGTCGTGGT 58.938 45.455 0.00 0.00 36.17 4.16
6752 7434 2.091588 CGTTCCGATTTACTTGTCGTGG 59.908 50.000 0.00 0.00 36.17 4.94
6753 7435 2.091588 CCGTTCCGATTTACTTGTCGTG 59.908 50.000 0.00 0.00 36.17 4.35
6754 7436 2.030007 TCCGTTCCGATTTACTTGTCGT 60.030 45.455 0.00 0.00 36.17 4.34
6755 7437 2.597305 CTCCGTTCCGATTTACTTGTCG 59.403 50.000 0.00 0.00 37.58 4.35
6756 7438 2.928116 CCTCCGTTCCGATTTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
6757 7439 2.354403 CCCTCCGTTCCGATTTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
6758 7440 2.093869 TCCCTCCGTTCCGATTTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
6759 7441 2.167900 CTCCCTCCGTTCCGATTTACTT 59.832 50.000 0.00 0.00 0.00 2.24
6760 7442 1.755380 CTCCCTCCGTTCCGATTTACT 59.245 52.381 0.00 0.00 0.00 2.24
6761 7443 1.479730 ACTCCCTCCGTTCCGATTTAC 59.520 52.381 0.00 0.00 0.00 2.01
6762 7444 1.856629 ACTCCCTCCGTTCCGATTTA 58.143 50.000 0.00 0.00 0.00 1.40
6763 7445 1.479730 GTACTCCCTCCGTTCCGATTT 59.520 52.381 0.00 0.00 0.00 2.17
6764 7446 1.109609 GTACTCCCTCCGTTCCGATT 58.890 55.000 0.00 0.00 0.00 3.34
6765 7447 0.033796 TGTACTCCCTCCGTTCCGAT 60.034 55.000 0.00 0.00 0.00 4.18
6766 7448 0.033796 ATGTACTCCCTCCGTTCCGA 60.034 55.000 0.00 0.00 0.00 4.55
6767 7449 0.102481 CATGTACTCCCTCCGTTCCG 59.898 60.000 0.00 0.00 0.00 4.30
6768 7450 1.136500 GTCATGTACTCCCTCCGTTCC 59.864 57.143 0.00 0.00 0.00 3.62
6769 7451 1.822990 TGTCATGTACTCCCTCCGTTC 59.177 52.381 0.00 0.00 0.00 3.95
6770 7452 1.933021 TGTCATGTACTCCCTCCGTT 58.067 50.000 0.00 0.00 0.00 4.44
6771 7453 2.160721 ATGTCATGTACTCCCTCCGT 57.839 50.000 0.00 0.00 0.00 4.69
6772 7454 6.333416 CAATATATGTCATGTACTCCCTCCG 58.667 44.000 0.00 0.00 0.00 4.63
6773 7455 6.644347 CCAATATATGTCATGTACTCCCTCC 58.356 44.000 0.00 0.00 0.00 4.30
6774 7456 6.109359 GCCAATATATGTCATGTACTCCCTC 58.891 44.000 0.00 0.00 0.00 4.30
6775 7457 5.547666 TGCCAATATATGTCATGTACTCCCT 59.452 40.000 0.00 0.00 0.00 4.20
6776 7458 5.804639 TGCCAATATATGTCATGTACTCCC 58.195 41.667 0.00 0.00 0.00 4.30
6777 7459 7.066284 GGAATGCCAATATATGTCATGTACTCC 59.934 40.741 0.00 0.00 0.00 3.85
6778 7460 7.066284 GGGAATGCCAATATATGTCATGTACTC 59.934 40.741 0.00 0.00 35.15 2.59
6779 7461 6.886459 GGGAATGCCAATATATGTCATGTACT 59.114 38.462 0.00 0.00 35.15 2.73
6780 7462 6.095440 GGGGAATGCCAATATATGTCATGTAC 59.905 42.308 0.00 0.00 35.15 2.90
6781 7463 6.186957 GGGGAATGCCAATATATGTCATGTA 58.813 40.000 0.00 0.00 35.15 2.29
6782 7464 5.018809 GGGGAATGCCAATATATGTCATGT 58.981 41.667 0.00 0.00 35.15 3.21
7122 7815 4.975147 TCCCTCCATTCCATAATGTAGTGT 59.025 41.667 0.00 0.00 40.84 3.55
7172 7865 3.356290 AGGCAAACATTGTAGACCATCC 58.644 45.455 0.00 0.00 0.00 3.51
7515 8216 5.994054 ACTTCGACCATCAATATCTCCAATG 59.006 40.000 0.00 0.00 0.00 2.82
7589 8290 4.320608 AACAAAATGTCAATCAAGCGGT 57.679 36.364 0.00 0.00 0.00 5.68
7855 8556 1.134699 TGGCGTTGCAAATTTGGACAA 60.135 42.857 19.47 12.70 0.00 3.18
7862 8563 3.063485 GTGGTAAATGGCGTTGCAAATT 58.937 40.909 0.00 0.00 0.00 1.82
7896 8597 0.247814 GCAATTGCTCCGTGATCACG 60.248 55.000 35.57 35.57 45.12 4.35
7954 8655 4.582701 TCATGGTCGCAACAGAAAATTT 57.417 36.364 0.00 0.00 0.00 1.82
7980 8681 0.665835 ATGTTTGCGCGTGGAAGAAA 59.334 45.000 8.43 0.00 0.00 2.52
7990 8691 0.784250 CACGACGTGTATGTTTGCGC 60.784 55.000 19.77 0.00 0.00 6.09
8323 9028 0.761323 TCTCCCCGAACTTGACACCA 60.761 55.000 0.00 0.00 0.00 4.17
8509 9214 2.669569 GCGGACTTGCAGAAGCCA 60.670 61.111 0.00 0.00 41.13 4.75
8633 9338 6.053650 TCATCATTTTCAAGAGAGCGATCAT 58.946 36.000 2.38 0.00 0.00 2.45
8728 9435 4.394920 CACGGTGCAGGTTTCAGTAATAAT 59.605 41.667 0.00 0.00 0.00 1.28
8748 9455 6.317088 ACATTTCATCAAATTAGACAGCACG 58.683 36.000 0.00 0.00 28.97 5.34
8816 9523 3.244814 GTCAGAGCAACGCTGAATATCAG 59.755 47.826 2.52 3.00 46.90 2.90
8821 9528 1.436600 CAGTCAGAGCAACGCTGAAT 58.563 50.000 2.52 0.00 41.46 2.57
8837 9544 2.638480 TTGCACCTGTTTCTAGCAGT 57.362 45.000 0.00 0.00 36.47 4.40
8838 9545 2.415090 GCATTGCACCTGTTTCTAGCAG 60.415 50.000 3.15 0.00 36.47 4.24
8839 9546 1.541147 GCATTGCACCTGTTTCTAGCA 59.459 47.619 3.15 0.00 0.00 3.49
8840 9547 1.135286 GGCATTGCACCTGTTTCTAGC 60.135 52.381 11.39 0.00 0.00 3.42
8842 9549 1.202989 TGGGCATTGCACCTGTTTCTA 60.203 47.619 8.73 0.00 0.00 2.10
8843 9550 0.469705 TGGGCATTGCACCTGTTTCT 60.470 50.000 8.73 0.00 0.00 2.52
8844 9551 0.609662 ATGGGCATTGCACCTGTTTC 59.390 50.000 8.73 0.00 0.00 2.78
8845 9552 0.322322 CATGGGCATTGCACCTGTTT 59.678 50.000 8.73 0.00 0.00 2.83
8846 9553 0.542467 TCATGGGCATTGCACCTGTT 60.542 50.000 14.64 0.35 29.97 3.16
8847 9554 0.542467 TTCATGGGCATTGCACCTGT 60.542 50.000 14.64 3.38 29.97 4.00
8848 9555 0.609151 TTTCATGGGCATTGCACCTG 59.391 50.000 8.73 9.23 0.00 4.00
8849 9556 1.350071 TTTTCATGGGCATTGCACCT 58.650 45.000 8.73 0.00 0.00 4.00
8850 9557 2.181954 TTTTTCATGGGCATTGCACC 57.818 45.000 8.73 8.70 0.00 5.01
8870 9577 3.658757 ATACGCATTGCACCTGTTTTT 57.341 38.095 9.69 0.00 0.00 1.94
8871 9578 3.658757 AATACGCATTGCACCTGTTTT 57.341 38.095 9.69 0.00 0.00 2.43
8882 9589 6.940298 AGGCTATACAATGGTAAATACGCATT 59.060 34.615 0.00 0.00 32.19 3.56
8888 9638 9.263538 CGTAACAAGGCTATACAATGGTAAATA 57.736 33.333 0.00 0.00 32.19 1.40
8900 9650 4.158394 ACCTCGAAACGTAACAAGGCTATA 59.842 41.667 6.83 0.00 0.00 1.31
8901 9651 3.056322 ACCTCGAAACGTAACAAGGCTAT 60.056 43.478 6.83 0.00 0.00 2.97
8914 9664 3.242712 CACACAAATTGCAACCTCGAAAC 59.757 43.478 0.00 0.00 0.00 2.78
8916 9666 2.425312 ACACACAAATTGCAACCTCGAA 59.575 40.909 0.00 0.00 0.00 3.71
8930 9680 6.998074 AGAAAGGTGAAGATTATGACACACAA 59.002 34.615 0.00 0.00 35.33 3.33
8937 9687 6.180472 GGGTTCAGAAAGGTGAAGATTATGA 58.820 40.000 0.00 0.00 37.12 2.15
8938 9688 5.358160 GGGGTTCAGAAAGGTGAAGATTATG 59.642 44.000 0.00 0.00 37.12 1.90
8945 9696 1.850345 AGTGGGGTTCAGAAAGGTGAA 59.150 47.619 0.00 0.00 33.95 3.18
8979 9732 2.552155 CCCGAGGTCTCACCATTGAAAA 60.552 50.000 0.00 0.00 41.95 2.29
8980 9733 1.003118 CCCGAGGTCTCACCATTGAAA 59.997 52.381 0.00 0.00 41.95 2.69
8981 9734 0.613260 CCCGAGGTCTCACCATTGAA 59.387 55.000 0.00 0.00 41.95 2.69
8983 9736 1.450312 GCCCGAGGTCTCACCATTG 60.450 63.158 0.00 0.00 41.95 2.82
9016 9769 3.467803 GAAAGACTAAGCCGGCATATGT 58.532 45.455 31.54 20.85 0.00 2.29
9025 9778 3.526534 AGCATCTTCGAAAGACTAAGCC 58.473 45.455 0.00 0.00 41.01 4.35
9026 9779 6.836577 ATAAGCATCTTCGAAAGACTAAGC 57.163 37.500 0.00 3.03 41.01 3.09
9027 9780 7.596995 CCCTATAAGCATCTTCGAAAGACTAAG 59.403 40.741 0.00 0.00 41.01 2.18
9028 9781 7.069578 ACCCTATAAGCATCTTCGAAAGACTAA 59.930 37.037 0.00 0.00 41.01 2.24
9029 9782 6.550108 ACCCTATAAGCATCTTCGAAAGACTA 59.450 38.462 0.00 0.00 41.01 2.59
9030 9783 5.364157 ACCCTATAAGCATCTTCGAAAGACT 59.636 40.000 0.00 0.00 41.01 3.24
9031 9784 5.602628 ACCCTATAAGCATCTTCGAAAGAC 58.397 41.667 0.00 0.00 41.01 3.01
9032 9785 5.871396 ACCCTATAAGCATCTTCGAAAGA 57.129 39.130 0.00 0.00 42.69 2.52
9033 9786 6.159988 CCTACCCTATAAGCATCTTCGAAAG 58.840 44.000 0.00 0.00 0.00 2.62
9034 9787 5.011738 CCCTACCCTATAAGCATCTTCGAAA 59.988 44.000 0.00 0.00 0.00 3.46
9035 9788 4.527038 CCCTACCCTATAAGCATCTTCGAA 59.473 45.833 0.00 0.00 0.00 3.71
9036 9789 4.087182 CCCTACCCTATAAGCATCTTCGA 58.913 47.826 0.00 0.00 0.00 3.71
9037 9790 3.833070 ACCCTACCCTATAAGCATCTTCG 59.167 47.826 0.00 0.00 0.00 3.79
9038 9791 4.593634 ACACCCTACCCTATAAGCATCTTC 59.406 45.833 0.00 0.00 0.00 2.87
9039 9792 4.567857 ACACCCTACCCTATAAGCATCTT 58.432 43.478 0.00 0.00 0.00 2.40
9040 9793 4.214993 ACACCCTACCCTATAAGCATCT 57.785 45.455 0.00 0.00 0.00 2.90
9041 9794 4.082354 CGTACACCCTACCCTATAAGCATC 60.082 50.000 0.00 0.00 0.00 3.91
9042 9795 3.830755 CGTACACCCTACCCTATAAGCAT 59.169 47.826 0.00 0.00 0.00 3.79
9043 9796 3.225104 CGTACACCCTACCCTATAAGCA 58.775 50.000 0.00 0.00 0.00 3.91
9044 9797 3.005155 CACGTACACCCTACCCTATAAGC 59.995 52.174 0.00 0.00 0.00 3.09
9045 9798 4.037208 CACACGTACACCCTACCCTATAAG 59.963 50.000 0.00 0.00 0.00 1.73
9046 9799 3.953612 CACACGTACACCCTACCCTATAA 59.046 47.826 0.00 0.00 0.00 0.98
9047 9800 3.053693 ACACACGTACACCCTACCCTATA 60.054 47.826 0.00 0.00 0.00 1.31
9048 9801 2.291800 ACACACGTACACCCTACCCTAT 60.292 50.000 0.00 0.00 0.00 2.57
9049 9802 1.075374 ACACACGTACACCCTACCCTA 59.925 52.381 0.00 0.00 0.00 3.53
9050 9803 0.178953 ACACACGTACACCCTACCCT 60.179 55.000 0.00 0.00 0.00 4.34
9051 9804 0.037975 CACACACGTACACCCTACCC 60.038 60.000 0.00 0.00 0.00 3.69
9052 9805 0.668401 GCACACACGTACACCCTACC 60.668 60.000 0.00 0.00 0.00 3.18
9053 9806 0.668401 GGCACACACGTACACCCTAC 60.668 60.000 0.00 0.00 0.00 3.18
9054 9807 0.828762 AGGCACACACGTACACCCTA 60.829 55.000 0.00 0.00 0.00 3.53
9055 9808 1.692173 AAGGCACACACGTACACCCT 61.692 55.000 0.00 0.00 0.00 4.34
9056 9809 0.816421 AAAGGCACACACGTACACCC 60.816 55.000 0.00 0.00 0.00 4.61
9057 9810 1.868469 TAAAGGCACACACGTACACC 58.132 50.000 0.00 0.00 0.00 4.16
9058 9811 3.615496 CCTATAAAGGCACACACGTACAC 59.385 47.826 0.00 0.00 35.64 2.90
9059 9812 3.510753 TCCTATAAAGGCACACACGTACA 59.489 43.478 0.00 0.00 43.31 2.90
9060 9813 4.110482 CTCCTATAAAGGCACACACGTAC 58.890 47.826 0.00 0.00 43.31 3.67
9061 9814 3.765511 ACTCCTATAAAGGCACACACGTA 59.234 43.478 0.00 0.00 43.31 3.57
9062 9815 2.565834 ACTCCTATAAAGGCACACACGT 59.434 45.455 0.00 0.00 43.31 4.49
9063 9816 3.247006 ACTCCTATAAAGGCACACACG 57.753 47.619 0.00 0.00 43.31 4.49
9064 9817 5.581085 CACTTACTCCTATAAAGGCACACAC 59.419 44.000 0.00 0.00 43.31 3.82
9065 9818 5.247564 ACACTTACTCCTATAAAGGCACACA 59.752 40.000 0.00 0.00 43.31 3.72
9066 9819 5.731591 ACACTTACTCCTATAAAGGCACAC 58.268 41.667 0.00 0.00 43.31 3.82
9067 9820 7.497595 CATACACTTACTCCTATAAAGGCACA 58.502 38.462 0.00 0.00 43.31 4.57
9068 9821 6.424207 GCATACACTTACTCCTATAAAGGCAC 59.576 42.308 0.00 0.00 43.31 5.01
9069 9822 6.522054 GCATACACTTACTCCTATAAAGGCA 58.478 40.000 0.00 0.00 43.31 4.75
9070 9823 5.634020 CGCATACACTTACTCCTATAAAGGC 59.366 44.000 0.00 0.00 43.31 4.35
9071 9824 5.634020 GCGCATACACTTACTCCTATAAAGG 59.366 44.000 0.30 0.00 45.21 3.11
9072 9825 5.342525 CGCGCATACACTTACTCCTATAAAG 59.657 44.000 8.75 0.00 0.00 1.85
9073 9826 5.217393 CGCGCATACACTTACTCCTATAAA 58.783 41.667 8.75 0.00 0.00 1.40
9074 9827 4.276678 ACGCGCATACACTTACTCCTATAA 59.723 41.667 5.73 0.00 0.00 0.98
9075 9828 3.817084 ACGCGCATACACTTACTCCTATA 59.183 43.478 5.73 0.00 0.00 1.31
9076 9829 2.621998 ACGCGCATACACTTACTCCTAT 59.378 45.455 5.73 0.00 0.00 2.57
9077 9830 2.019249 ACGCGCATACACTTACTCCTA 58.981 47.619 5.73 0.00 0.00 2.94
9078 9831 0.815734 ACGCGCATACACTTACTCCT 59.184 50.000 5.73 0.00 0.00 3.69
9079 9832 0.921347 CACGCGCATACACTTACTCC 59.079 55.000 5.73 0.00 0.00 3.85
9080 9833 1.625616 ACACGCGCATACACTTACTC 58.374 50.000 5.73 0.00 0.00 2.59
9081 9834 2.925578 TACACGCGCATACACTTACT 57.074 45.000 5.73 0.00 0.00 2.24
9082 9835 4.913345 TCATATACACGCGCATACACTTAC 59.087 41.667 5.73 0.00 0.00 2.34
9083 9836 5.110940 TCATATACACGCGCATACACTTA 57.889 39.130 5.73 0.00 0.00 2.24
9084 9837 3.972403 TCATATACACGCGCATACACTT 58.028 40.909 5.73 0.00 0.00 3.16
9085 9838 3.565516 CTCATATACACGCGCATACACT 58.434 45.455 5.73 0.00 0.00 3.55
9086 9839 2.090658 GCTCATATACACGCGCATACAC 59.909 50.000 5.73 0.00 0.00 2.90
9087 9840 2.324860 GCTCATATACACGCGCATACA 58.675 47.619 5.73 0.00 0.00 2.29
9088 9841 1.317611 CGCTCATATACACGCGCATAC 59.682 52.381 5.73 0.00 39.11 2.39
9089 9842 1.613270 CGCTCATATACACGCGCATA 58.387 50.000 5.73 1.53 39.11 3.14
9090 9843 2.434688 CGCTCATATACACGCGCAT 58.565 52.632 5.73 0.00 39.11 4.73
9091 9844 3.916439 CGCTCATATACACGCGCA 58.084 55.556 5.73 0.00 39.11 6.09
9095 9848 0.159554 CGCAAGCGCTCATATACACG 59.840 55.000 12.06 2.00 35.30 4.49
9096 9849 1.190323 GACGCAAGCGCTCATATACAC 59.810 52.381 12.06 0.00 44.19 2.90
9097 9850 1.067060 AGACGCAAGCGCTCATATACA 59.933 47.619 12.06 0.00 44.19 2.29
9098 9851 1.453524 CAGACGCAAGCGCTCATATAC 59.546 52.381 12.06 1.00 44.19 1.47
9099 9852 1.067060 ACAGACGCAAGCGCTCATATA 59.933 47.619 12.06 0.00 44.19 0.86
9100 9853 0.179100 ACAGACGCAAGCGCTCATAT 60.179 50.000 12.06 0.00 44.19 1.78
9101 9854 0.454196 TACAGACGCAAGCGCTCATA 59.546 50.000 12.06 5.16 44.19 2.15
9102 9855 0.389817 TTACAGACGCAAGCGCTCAT 60.390 50.000 12.06 0.00 44.19 2.90
9103 9856 0.389817 ATTACAGACGCAAGCGCTCA 60.390 50.000 12.06 0.83 44.19 4.26
9104 9857 0.025513 CATTACAGACGCAAGCGCTC 59.974 55.000 12.06 11.06 44.19 5.03
9105 9858 0.670546 ACATTACAGACGCAAGCGCT 60.671 50.000 15.09 2.64 44.19 5.92
9106 9859 0.519175 CACATTACAGACGCAAGCGC 60.519 55.000 15.09 0.00 44.19 5.92
9107 9860 0.790207 ACACATTACAGACGCAAGCG 59.210 50.000 13.50 13.50 46.03 4.68
9108 9861 2.969443 AACACATTACAGACGCAAGC 57.031 45.000 0.00 0.00 45.62 4.01
9130 9883 9.369904 GGCAGAAAATGTGACATATGTATTTTT 57.630 29.630 20.77 16.96 32.79 1.94
9131 9884 8.530311 TGGCAGAAAATGTGACATATGTATTTT 58.470 29.630 20.27 20.27 34.65 1.82
9132 9885 8.065473 TGGCAGAAAATGTGACATATGTATTT 57.935 30.769 8.71 8.65 0.00 1.40
9133 9886 7.643569 TGGCAGAAAATGTGACATATGTATT 57.356 32.000 8.71 2.33 0.00 1.89
9134 9887 6.238842 GCTGGCAGAAAATGTGACATATGTAT 60.239 38.462 20.86 0.00 30.65 2.29
9135 9888 5.066375 GCTGGCAGAAAATGTGACATATGTA 59.934 40.000 20.86 0.00 30.65 2.29
9136 9889 4.142315 GCTGGCAGAAAATGTGACATATGT 60.142 41.667 20.86 8.43 30.65 2.29
9137 9890 4.097437 AGCTGGCAGAAAATGTGACATATG 59.903 41.667 20.86 0.00 30.65 1.78
9143 9896 3.719924 CAAAAGCTGGCAGAAAATGTGA 58.280 40.909 20.86 0.00 0.00 3.58
9159 9912 6.917533 AGAGGTGTCAATTATCTTGCAAAAG 58.082 36.000 0.00 0.00 0.00 2.27
9165 9918 7.517417 GCGAACATAGAGGTGTCAATTATCTTG 60.517 40.741 0.00 0.00 0.00 3.02
9167 9920 5.986135 GCGAACATAGAGGTGTCAATTATCT 59.014 40.000 0.00 0.00 0.00 1.98
9184 9937 4.037923 AGGAATTTCTGTGTTTGCGAACAT 59.962 37.500 22.15 4.68 46.63 2.71
9187 9940 4.358851 CAAGGAATTTCTGTGTTTGCGAA 58.641 39.130 0.00 0.00 0.00 4.70
9189 9942 2.472488 GCAAGGAATTTCTGTGTTTGCG 59.528 45.455 0.00 0.00 31.52 4.85
9195 9948 5.125097 AGCAGATTAGCAAGGAATTTCTGTG 59.875 40.000 0.00 0.00 36.85 3.66
9221 9974 3.072184 AGGAGAATTTGACAGTGAGCACT 59.928 43.478 0.00 0.00 43.61 4.40
9233 9986 7.035004 TGTGTGTTTTTGAGAAGGAGAATTTG 58.965 34.615 0.00 0.00 0.00 2.32
9239 9992 5.765182 AGGTATGTGTGTTTTTGAGAAGGAG 59.235 40.000 0.00 0.00 0.00 3.69
9245 9998 9.965824 ATTAAAAGAGGTATGTGTGTTTTTGAG 57.034 29.630 0.00 0.00 0.00 3.02
9265 10018 6.326970 TCCAAGAGGGGGATTTCAATTAAAA 58.673 36.000 0.00 0.00 37.22 1.52
9289 10042 7.667043 TTGTTACTCTAAGTGAAATTGCGAT 57.333 32.000 0.00 0.00 0.00 4.58
9291 10044 8.067784 TCTTTTGTTACTCTAAGTGAAATTGCG 58.932 33.333 0.00 0.00 0.00 4.85
9295 10048 9.274206 GGTCTCTTTTGTTACTCTAAGTGAAAT 57.726 33.333 0.00 0.00 0.00 2.17
9304 10057 4.341520 ACAGTCGGTCTCTTTTGTTACTCT 59.658 41.667 0.00 0.00 0.00 3.24
9322 10075 8.738645 ACTATTAATTCATTCCAAGGACAGTC 57.261 34.615 0.00 0.00 0.00 3.51
9323 10076 8.960591 CAACTATTAATTCATTCCAAGGACAGT 58.039 33.333 0.00 0.00 0.00 3.55
9348 10101 5.034852 TCGGGCTCTGAAATGAATATTCA 57.965 39.130 20.07 20.07 42.14 2.57
9349 10102 4.083590 GCTCGGGCTCTGAAATGAATATTC 60.084 45.833 8.60 8.60 35.22 1.75
9350 10103 3.817647 GCTCGGGCTCTGAAATGAATATT 59.182 43.478 0.00 0.00 35.22 1.28
9351 10104 3.406764 GCTCGGGCTCTGAAATGAATAT 58.593 45.455 0.00 0.00 35.22 1.28
9352 10105 2.838736 GCTCGGGCTCTGAAATGAATA 58.161 47.619 0.00 0.00 35.22 1.75
9353 10106 1.673168 GCTCGGGCTCTGAAATGAAT 58.327 50.000 0.00 0.00 35.22 2.57
9354 10107 3.159298 GCTCGGGCTCTGAAATGAA 57.841 52.632 0.00 0.00 35.22 2.57
9355 10108 4.941609 GCTCGGGCTCTGAAATGA 57.058 55.556 0.00 0.00 35.22 2.57
9365 10118 2.894387 GTGCAGATGAGCTCGGGC 60.894 66.667 9.64 0.00 39.06 6.13
9367 10120 1.028130 TAGAGTGCAGATGAGCTCGG 58.972 55.000 9.64 0.00 33.52 4.63
9368 10121 2.292845 TCATAGAGTGCAGATGAGCTCG 59.707 50.000 9.64 0.00 33.52 5.03
9369 10122 4.050553 GTTCATAGAGTGCAGATGAGCTC 58.949 47.826 6.82 6.82 31.50 4.09
9371 10124 3.790091 TGTTCATAGAGTGCAGATGAGC 58.210 45.455 0.00 0.00 33.04 4.26
9372 10125 5.008619 ACTGTTCATAGAGTGCAGATGAG 57.991 43.478 0.00 0.00 31.50 2.90
9373 10126 6.530019 TTACTGTTCATAGAGTGCAGATGA 57.470 37.500 0.00 0.00 0.00 2.92
9375 10128 9.890629 TTATTTTACTGTTCATAGAGTGCAGAT 57.109 29.630 0.00 0.00 0.00 2.90
9376 10129 9.719355 TTTATTTTACTGTTCATAGAGTGCAGA 57.281 29.630 0.00 0.00 0.00 4.26
9446 10914 1.156736 CACACACGGGAACATCTTCC 58.843 55.000 0.00 0.00 45.04 3.46
9447 10915 2.069273 CTCACACACGGGAACATCTTC 58.931 52.381 0.00 0.00 0.00 2.87
9448 10916 1.691976 TCTCACACACGGGAACATCTT 59.308 47.619 0.00 0.00 0.00 2.40
9452 10920 0.320374 GGATCTCACACACGGGAACA 59.680 55.000 0.00 0.00 0.00 3.18
9453 10921 0.736325 CGGATCTCACACACGGGAAC 60.736 60.000 0.00 0.00 0.00 3.62
9454 10922 1.183030 ACGGATCTCACACACGGGAA 61.183 55.000 0.00 0.00 0.00 3.97
9456 10924 1.446099 CACGGATCTCACACACGGG 60.446 63.158 0.00 0.00 0.00 5.28
9459 10927 0.602638 TTGGCACGGATCTCACACAC 60.603 55.000 0.00 0.00 0.00 3.82
9460 10928 0.107643 TTTGGCACGGATCTCACACA 59.892 50.000 0.00 0.00 0.00 3.72
9461 10929 1.453155 ATTTGGCACGGATCTCACAC 58.547 50.000 0.00 0.00 0.00 3.82
9462 10930 2.198827 AATTTGGCACGGATCTCACA 57.801 45.000 0.00 0.00 0.00 3.58
9463 10931 2.487762 TGAAATTTGGCACGGATCTCAC 59.512 45.455 0.00 0.00 0.00 3.51
9464 10932 2.749076 CTGAAATTTGGCACGGATCTCA 59.251 45.455 0.00 0.00 0.00 3.27
9465 10933 2.098117 CCTGAAATTTGGCACGGATCTC 59.902 50.000 0.00 0.00 0.00 2.75
9466 10934 2.094675 CCTGAAATTTGGCACGGATCT 58.905 47.619 0.00 0.00 0.00 2.75
9467 10935 1.818674 ACCTGAAATTTGGCACGGATC 59.181 47.619 0.00 0.00 0.00 3.36
9469 10937 1.243902 GACCTGAAATTTGGCACGGA 58.756 50.000 0.00 0.00 0.00 4.69
9470 10938 0.109781 CGACCTGAAATTTGGCACGG 60.110 55.000 0.00 0.00 0.00 4.94
9471 10939 0.591170 ACGACCTGAAATTTGGCACG 59.409 50.000 0.00 4.54 34.50 5.34
9473 10941 2.223923 CCAAACGACCTGAAATTTGGCA 60.224 45.455 0.00 0.00 43.29 4.92
9476 10944 4.300189 TGTCCAAACGACCTGAAATTTG 57.700 40.909 0.00 0.00 41.18 2.32
9479 10947 5.496556 TCATATGTCCAAACGACCTGAAAT 58.503 37.500 1.90 0.00 41.18 2.17
9481 10949 4.020573 ACTCATATGTCCAAACGACCTGAA 60.021 41.667 1.90 0.00 41.18 3.02
9482 10950 3.513912 ACTCATATGTCCAAACGACCTGA 59.486 43.478 1.90 0.00 41.18 3.86
9483 10951 3.861840 ACTCATATGTCCAAACGACCTG 58.138 45.455 1.90 0.00 41.18 4.00
9484 10952 4.441634 GCTACTCATATGTCCAAACGACCT 60.442 45.833 1.90 0.00 41.18 3.85
9485 10953 3.802685 GCTACTCATATGTCCAAACGACC 59.197 47.826 1.90 0.00 41.18 4.79
9487 10955 4.645136 AGAGCTACTCATATGTCCAAACGA 59.355 41.667 1.90 0.00 32.06 3.85
9516 10984 7.976734 TGTATTGTTCGGACAGATTTTGTTTTT 59.023 29.630 0.00 0.00 41.05 1.94
9518 10986 6.915843 GTGTATTGTTCGGACAGATTTTGTTT 59.084 34.615 0.00 0.00 41.05 2.83
9519 10987 6.262273 AGTGTATTGTTCGGACAGATTTTGTT 59.738 34.615 0.00 0.00 41.05 2.83
9520 10988 5.763204 AGTGTATTGTTCGGACAGATTTTGT 59.237 36.000 0.00 0.00 44.55 2.83
9521 10989 6.079763 CAGTGTATTGTTCGGACAGATTTTG 58.920 40.000 0.00 0.00 37.04 2.44
9522 10990 5.763204 ACAGTGTATTGTTCGGACAGATTTT 59.237 36.000 0.00 0.00 37.04 1.82
9523 10991 5.305585 ACAGTGTATTGTTCGGACAGATTT 58.694 37.500 0.00 0.00 37.04 2.17
9524 10992 4.894784 ACAGTGTATTGTTCGGACAGATT 58.105 39.130 0.00 0.00 37.04 2.40
9526 10994 4.330944 AACAGTGTATTGTTCGGACAGA 57.669 40.909 0.00 0.00 36.60 3.41
9527 10995 4.509970 TGAAACAGTGTATTGTTCGGACAG 59.490 41.667 0.00 0.00 40.24 3.51
9530 10998 4.443621 TGTGAAACAGTGTATTGTTCGGA 58.556 39.130 0.00 0.00 45.67 4.55
9531 10999 4.804608 TGTGAAACAGTGTATTGTTCGG 57.195 40.909 0.00 0.00 45.67 4.30
9570 11038 0.036388 CCGGGTAGCTCTCAGCAAAA 60.036 55.000 0.00 0.00 45.56 2.44
9571 11039 0.902984 TCCGGGTAGCTCTCAGCAAA 60.903 55.000 0.00 0.00 45.56 3.68
9572 11040 0.687757 ATCCGGGTAGCTCTCAGCAA 60.688 55.000 0.00 0.00 45.56 3.91
9573 11041 1.075970 ATCCGGGTAGCTCTCAGCA 60.076 57.895 0.00 0.00 45.56 4.41
9574 11042 1.365633 CATCCGGGTAGCTCTCAGC 59.634 63.158 0.00 0.00 42.84 4.26
9575 11043 0.671251 GACATCCGGGTAGCTCTCAG 59.329 60.000 0.00 0.00 0.00 3.35
9576 11044 0.755698 GGACATCCGGGTAGCTCTCA 60.756 60.000 0.00 0.00 0.00 3.27
9578 11046 0.325296 TTGGACATCCGGGTAGCTCT 60.325 55.000 0.00 0.00 39.43 4.09
9579 11047 0.539986 TTTGGACATCCGGGTAGCTC 59.460 55.000 0.00 0.00 39.43 4.09
9580 11048 1.134098 CATTTGGACATCCGGGTAGCT 60.134 52.381 0.00 0.00 39.43 3.32
9581 11049 1.134220 TCATTTGGACATCCGGGTAGC 60.134 52.381 0.00 0.00 39.43 3.58
9583 11051 1.134220 GCTCATTTGGACATCCGGGTA 60.134 52.381 0.00 0.00 39.43 3.69
9584 11052 0.394352 GCTCATTTGGACATCCGGGT 60.394 55.000 0.00 0.00 39.43 5.28
9585 11053 0.107017 AGCTCATTTGGACATCCGGG 60.107 55.000 0.00 0.00 39.43 5.73
9586 11054 1.019673 CAGCTCATTTGGACATCCGG 58.980 55.000 0.00 0.00 39.43 5.14
9587 11055 2.028420 TCAGCTCATTTGGACATCCG 57.972 50.000 0.00 0.00 39.43 4.18
9588 11056 4.996788 ATTTCAGCTCATTTGGACATCC 57.003 40.909 0.00 0.00 0.00 3.51
9589 11057 6.401796 GCAAAATTTCAGCTCATTTGGACATC 60.402 38.462 7.99 0.00 32.91 3.06
9590 11058 5.410439 GCAAAATTTCAGCTCATTTGGACAT 59.590 36.000 7.99 0.00 32.91 3.06
9592 11060 4.751098 TGCAAAATTTCAGCTCATTTGGAC 59.249 37.500 14.34 0.00 32.91 4.02
9593 11061 4.751098 GTGCAAAATTTCAGCTCATTTGGA 59.249 37.500 14.34 0.00 32.91 3.53
9596 11064 4.619973 TCGTGCAAAATTTCAGCTCATTT 58.380 34.783 14.34 0.00 0.00 2.32
9597 11065 4.241590 TCGTGCAAAATTTCAGCTCATT 57.758 36.364 14.34 0.00 0.00 2.57
9598 11066 3.921119 TCGTGCAAAATTTCAGCTCAT 57.079 38.095 14.34 0.00 0.00 2.90
9599 11067 3.366273 GGATCGTGCAAAATTTCAGCTCA 60.366 43.478 14.34 5.33 0.00 4.26
9601 11069 2.821969 AGGATCGTGCAAAATTTCAGCT 59.178 40.909 14.34 0.00 0.00 4.24
9603 11071 4.161333 GTGAGGATCGTGCAAAATTTCAG 58.839 43.478 0.00 0.00 38.61 3.02
9604 11072 3.364864 CGTGAGGATCGTGCAAAATTTCA 60.365 43.478 0.00 0.00 38.61 2.69
9605 11073 3.163594 CGTGAGGATCGTGCAAAATTTC 58.836 45.455 0.00 0.00 38.61 2.17
9606 11074 2.668279 GCGTGAGGATCGTGCAAAATTT 60.668 45.455 0.00 0.00 38.61 1.82
9607 11075 1.135689 GCGTGAGGATCGTGCAAAATT 60.136 47.619 0.00 0.00 38.61 1.82
9609 11077 0.882484 TGCGTGAGGATCGTGCAAAA 60.882 50.000 0.00 0.00 43.40 2.44
9610 11078 1.301322 TGCGTGAGGATCGTGCAAA 60.301 52.632 0.00 0.00 43.40 3.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.