Multiple sequence alignment - TraesCS7D01G317400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G317400 chr7D 100.000 7111 0 0 1 7111 403814156 403807046 0.000000e+00 13132.0
1 TraesCS7D01G317400 chr7D 98.438 128 2 0 1994 2121 168423243 168423370 7.180000e-55 226.0
2 TraesCS7D01G317400 chr7D 96.923 130 4 0 1993 2122 570160747 570160618 1.200000e-52 219.0
3 TraesCS7D01G317400 chr7D 93.056 72 2 3 6526 6595 6484532 6484462 1.260000e-17 102.0
4 TraesCS7D01G317400 chr7A 93.192 2776 84 37 3693 6379 462445491 462442732 0.000000e+00 3982.0
5 TraesCS7D01G317400 chr7A 95.156 1218 52 6 783 1995 462448261 462447046 0.000000e+00 1916.0
6 TraesCS7D01G317400 chr7A 93.033 933 40 9 2692 3613 462446406 462445488 0.000000e+00 1339.0
7 TraesCS7D01G317400 chr7A 95.826 575 21 2 2117 2691 462447049 462446478 0.000000e+00 926.0
8 TraesCS7D01G317400 chr7A 90.977 133 11 1 6979 7111 462442018 462441887 2.040000e-40 178.0
9 TraesCS7D01G317400 chr7A 96.739 92 2 1 3612 3703 290920036 290919946 1.240000e-32 152.0
10 TraesCS7D01G317400 chr7B 95.431 1751 31 8 4830 6573 413255248 413253540 0.000000e+00 2745.0
11 TraesCS7D01G317400 chr7B 94.584 1274 54 8 734 1995 413259508 413258238 0.000000e+00 1956.0
12 TraesCS7D01G317400 chr7B 95.981 1070 30 6 3693 4752 413256615 413255549 0.000000e+00 1725.0
13 TraesCS7D01G317400 chr7B 98.785 576 6 1 2117 2691 413258241 413257666 0.000000e+00 1024.0
14 TraesCS7D01G317400 chr7B 96.111 540 14 7 2692 3229 413257594 413257060 0.000000e+00 874.0
15 TraesCS7D01G317400 chr7B 96.375 469 15 2 3145 3613 413257078 413256612 0.000000e+00 771.0
16 TraesCS7D01G317400 chr7B 99.036 415 4 0 6697 7111 413253104 413252690 0.000000e+00 745.0
17 TraesCS7D01G317400 chr7B 91.453 351 20 4 1 349 413260020 413259678 2.320000e-129 473.0
18 TraesCS7D01G317400 chr7B 92.511 227 11 4 352 572 541163823 541164049 3.200000e-83 320.0
19 TraesCS7D01G317400 chr7B 95.541 157 7 0 6540 6696 413253543 413253387 1.180000e-62 252.0
20 TraesCS7D01G317400 chr7B 93.966 116 5 2 603 718 747565092 747565205 2.640000e-39 174.0
21 TraesCS7D01G317400 chr7B 96.667 60 2 0 4745 4804 413255535 413255476 4.540000e-17 100.0
22 TraesCS7D01G317400 chr7B 100.000 28 0 0 6492 6519 165303021 165303048 1.300000e-02 52.8
23 TraesCS7D01G317400 chr4B 93.363 226 11 3 352 573 12091703 12091478 1.480000e-86 331.0
24 TraesCS7D01G317400 chr4B 92.857 224 13 3 352 572 132881997 132882220 8.900000e-84 322.0
25 TraesCS7D01G317400 chr4B 95.082 61 2 1 6526 6585 464085096 464085156 2.110000e-15 95.3
26 TraesCS7D01G317400 chr5D 93.274 223 11 3 352 570 441221982 441221760 6.880000e-85 326.0
27 TraesCS7D01G317400 chr5D 93.607 219 9 3 359 572 110351601 110351383 8.900000e-84 322.0
28 TraesCS7D01G317400 chr5D 97.638 127 3 0 1994 2120 395734311 395734437 1.200000e-52 219.0
29 TraesCS7D01G317400 chr5D 82.500 120 15 5 6477 6591 129166203 129166085 4.540000e-17 100.0
30 TraesCS7D01G317400 chr5D 95.312 64 2 1 6526 6588 175227760 175227697 4.540000e-17 100.0
31 TraesCS7D01G317400 chr5D 96.610 59 1 1 6528 6585 261390227 261390285 5.870000e-16 97.1
32 TraesCS7D01G317400 chr6B 92.544 228 13 3 349 572 14100624 14100397 2.470000e-84 324.0
33 TraesCS7D01G317400 chr6B 92.857 70 2 3 6526 6592 601137647 601137578 1.630000e-16 99.0
34 TraesCS7D01G317400 chr1D 92.857 224 12 4 352 572 203869899 203869677 8.900000e-84 322.0
35 TraesCS7D01G317400 chr1D 94.904 157 8 0 1 157 111805834 111805678 5.510000e-61 246.0
36 TraesCS7D01G317400 chr1D 94.904 157 8 0 1 157 153518792 153518636 5.510000e-61 246.0
37 TraesCS7D01G317400 chr1D 85.030 167 23 2 1807 1972 2617725 2617890 1.230000e-37 169.0
38 TraesCS7D01G317400 chr1D 88.976 127 14 0 1846 1972 192957016 192956890 2.660000e-34 158.0
39 TraesCS7D01G317400 chr1D 96.512 86 3 0 3612 3697 448689895 448689980 7.440000e-30 143.0
40 TraesCS7D01G317400 chr1D 93.617 94 3 2 3612 3705 477285702 477285612 3.460000e-28 137.0
41 TraesCS7D01G317400 chr1D 91.837 98 7 1 3606 3703 163770359 163770455 1.240000e-27 135.0
42 TraesCS7D01G317400 chr1D 91.837 98 7 1 3606 3703 163775444 163775540 1.240000e-27 135.0
43 TraesCS7D01G317400 chr1D 93.333 90 5 1 3607 3696 464733129 464733217 1.610000e-26 132.0
44 TraesCS7D01G317400 chr1D 92.000 75 4 2 6526 6599 276496489 276496562 3.510000e-18 104.0
45 TraesCS7D01G317400 chr1D 95.238 63 2 1 6524 6585 161408249 161408187 1.630000e-16 99.0
46 TraesCS7D01G317400 chr1D 92.647 68 4 1 6526 6592 406733856 406733923 5.870000e-16 97.1
47 TraesCS7D01G317400 chr1D 95.082 61 2 1 6526 6585 73688131 73688071 2.110000e-15 95.3
48 TraesCS7D01G317400 chr1D 100.000 28 0 0 6492 6519 459895504 459895531 1.300000e-02 52.8
49 TraesCS7D01G317400 chr4D 92.377 223 15 2 352 572 423881848 423882070 4.140000e-82 316.0
50 TraesCS7D01G317400 chr4D 93.827 162 9 1 1 161 81151570 81151731 7.130000e-60 243.0
51 TraesCS7D01G317400 chr4D 93.684 95 6 0 3606 3700 492602242 492602148 7.440000e-30 143.0
52 TraesCS7D01G317400 chr4D 96.471 85 3 0 3612 3696 31895550 31895466 2.670000e-29 141.0
53 TraesCS7D01G317400 chr4D 91.919 99 7 1 3609 3707 31338348 31338445 3.460000e-28 137.0
54 TraesCS7D01G317400 chr4D 93.478 92 6 0 3612 3703 34978425 34978334 3.460000e-28 137.0
55 TraesCS7D01G317400 chr4D 95.082 61 2 1 6526 6585 394190905 394190965 2.110000e-15 95.3
56 TraesCS7D01G317400 chr4D 90.411 73 3 3 6516 6585 333016958 333017029 7.600000e-15 93.5
57 TraesCS7D01G317400 chr4D 100.000 28 0 0 6492 6519 100827561 100827534 1.300000e-02 52.8
58 TraesCS7D01G317400 chr1A 92.411 224 14 3 352 572 532969219 532969442 4.140000e-82 316.0
59 TraesCS7D01G317400 chr1A 94.690 113 6 0 603 715 37618930 37618818 7.330000e-40 176.0
60 TraesCS7D01G317400 chr1A 91.549 71 4 2 6526 6594 312159843 312159773 5.870000e-16 97.1
61 TraesCS7D01G317400 chr2B 83.618 293 43 4 1708 1995 569534421 569534129 3.270000e-68 270.0
62 TraesCS7D01G317400 chr2B 96.429 112 3 1 603 714 223099478 223099368 4.380000e-42 183.0
63 TraesCS7D01G317400 chr2B 92.000 100 6 2 3604 3701 773746256 773746157 9.620000e-29 139.0
64 TraesCS7D01G317400 chr1B 83.618 293 43 4 1708 1995 623311287 623311579 3.270000e-68 270.0
65 TraesCS7D01G317400 chr1B 94.690 113 6 0 603 715 317556886 317556998 7.330000e-40 176.0
66 TraesCS7D01G317400 chr1B 94.690 113 5 1 603 715 626586156 626586267 2.640000e-39 174.0
67 TraesCS7D01G317400 chr1B 96.512 86 3 0 3611 3696 562890135 562890050 7.440000e-30 143.0
68 TraesCS7D01G317400 chr1B 96.721 61 1 1 6526 6585 249373938 249373998 4.540000e-17 100.0
69 TraesCS7D01G317400 chr1B 90.541 74 4 3 6526 6597 457734650 457734722 2.110000e-15 95.3
70 TraesCS7D01G317400 chr5B 90.500 200 14 2 1 196 533771932 533771734 7.080000e-65 259.0
71 TraesCS7D01G317400 chr5B 91.813 171 11 3 1 171 275548971 275549138 1.190000e-57 235.0
72 TraesCS7D01G317400 chr5B 82.759 174 26 3 1807 1977 631587762 631587934 1.240000e-32 152.0
73 TraesCS7D01G317400 chr5B 92.958 71 4 1 6526 6595 31287994 31288064 1.260000e-17 102.0
74 TraesCS7D01G317400 chr3D 94.904 157 8 0 1 157 124559670 124559514 5.510000e-61 246.0
75 TraesCS7D01G317400 chr3D 96.970 132 4 0 1993 2124 339862160 339862291 9.280000e-54 222.0
76 TraesCS7D01G317400 chr3D 94.737 95 3 2 3609 3702 455100571 455100664 5.750000e-31 147.0
77 TraesCS7D01G317400 chr3D 93.548 93 5 1 3612 3704 603266358 603266267 3.460000e-28 137.0
78 TraesCS7D01G317400 chr3D 90.909 99 9 0 3605 3703 138182741 138182643 4.480000e-27 134.0
79 TraesCS7D01G317400 chr3D 95.312 64 2 1 6526 6588 235522799 235522736 4.540000e-17 100.0
80 TraesCS7D01G317400 chr3D 96.721 61 1 1 6526 6585 606951372 606951432 4.540000e-17 100.0
81 TraesCS7D01G317400 chr3A 94.904 157 8 0 1 157 558544905 558544749 5.510000e-61 246.0
82 TraesCS7D01G317400 chr3A 98.450 129 2 0 1994 2122 365363077 365363205 2.000000e-55 228.0
83 TraesCS7D01G317400 chr3A 96.947 131 4 0 1994 2124 474435804 474435674 3.340000e-53 220.0
84 TraesCS7D01G317400 chr3A 97.638 127 3 0 1994 2120 198491943 198491817 1.200000e-52 219.0
85 TraesCS7D01G317400 chr3A 96.552 87 3 0 3610 3696 612664570 612664656 2.070000e-30 145.0
86 TraesCS7D01G317400 chr3A 92.754 69 4 1 6529 6596 648695975 648695907 1.630000e-16 99.0
87 TraesCS7D01G317400 chr3A 100.000 28 0 0 6492 6519 80710300 80710327 1.300000e-02 52.8
88 TraesCS7D01G317400 chr2D 94.872 156 8 0 1 156 405020885 405021040 1.980000e-60 244.0
89 TraesCS7D01G317400 chr2D 97.701 87 2 0 3610 3696 236654249 236654335 4.440000e-32 150.0
90 TraesCS7D01G317400 chr2D 95.556 90 4 0 3607 3696 213059974 213060063 2.070000e-30 145.0
91 TraesCS7D01G317400 chr2D 94.286 70 2 2 6526 6593 340252806 340252875 9.760000e-19 106.0
92 TraesCS7D01G317400 chr6D 97.638 127 3 0 1994 2120 62116261 62116135 1.200000e-52 219.0
93 TraesCS7D01G317400 chr6D 94.444 90 4 1 3612 3701 7477713 7477801 3.460000e-28 137.0
94 TraesCS7D01G317400 chr6D 92.708 96 5 1 3612 3707 95724148 95724055 3.460000e-28 137.0
95 TraesCS7D01G317400 chr6D 95.294 85 4 0 3612 3696 93317813 93317729 1.240000e-27 135.0
96 TraesCS7D01G317400 chr6D 94.382 89 4 1 3609 3696 129710221 129710133 1.240000e-27 135.0
97 TraesCS7D01G317400 chr6D 93.478 92 5 1 3611 3701 142846312 142846403 1.240000e-27 135.0
98 TraesCS7D01G317400 chr6D 95.294 85 4 0 3612 3696 142846397 142846313 1.240000e-27 135.0
99 TraesCS7D01G317400 chr6D 94.253 87 5 0 3610 3696 93317727 93317813 4.480000e-27 134.0
100 TraesCS7D01G317400 chr6D 94.118 85 5 0 3612 3696 115754481 115754565 5.790000e-26 130.0
101 TraesCS7D01G317400 chr6D 89.899 99 8 2 3599 3696 316259892 316259795 7.490000e-25 126.0
102 TraesCS7D01G317400 chr6D 89.899 99 6 4 3607 3704 149721753 149721658 2.690000e-24 124.0
103 TraesCS7D01G317400 chr6D 95.312 64 2 1 6526 6588 60856277 60856214 4.540000e-17 100.0
104 TraesCS7D01G317400 chr6D 96.721 61 1 1 6526 6585 272859290 272859230 4.540000e-17 100.0
105 TraesCS7D01G317400 chr6D 87.234 94 5 6 6526 6617 426049056 426049144 4.540000e-17 100.0
106 TraesCS7D01G317400 chr6D 94.915 59 2 1 6528 6585 137242856 137242914 2.730000e-14 91.6
107 TraesCS7D01G317400 chr6D 98.039 51 1 0 6535 6585 95896022 95895972 9.830000e-14 89.8
108 TraesCS7D01G317400 chr6D 90.909 66 5 1 6526 6590 383493360 383493425 3.530000e-13 87.9
109 TraesCS7D01G317400 chr2A 94.203 138 6 2 1994 2131 30873516 30873381 7.230000e-50 209.0
110 TraesCS7D01G317400 chr2A 95.575 113 4 1 603 715 40245578 40245689 5.670000e-41 180.0
111 TraesCS7D01G317400 chr2A 81.481 162 29 1 1812 1972 710170400 710170239 1.610000e-26 132.0
112 TraesCS7D01G317400 chr4A 95.575 113 5 0 603 715 737301801 737301689 1.580000e-41 182.0
113 TraesCS7D01G317400 chr4A 93.617 94 4 2 3605 3697 709209101 709209193 9.620000e-29 139.0
114 TraesCS7D01G317400 chr5A 94.737 114 6 0 603 716 666907867 666907754 2.040000e-40 178.0
115 TraesCS7D01G317400 chr5A 93.000 100 6 1 3604 3703 557345845 557345943 2.070000e-30 145.0
116 TraesCS7D01G317400 chr5A 93.056 72 3 2 6526 6596 675668231 675668301 3.510000e-18 104.0
117 TraesCS7D01G317400 chr6A 94.690 113 6 0 603 715 602356621 602356509 7.330000e-40 176.0
118 TraesCS7D01G317400 chr3B 82.036 167 29 1 1807 1972 17705548 17705382 2.670000e-29 141.0
119 TraesCS7D01G317400 chrUn 94.253 87 4 1 3610 3696 71667089 71667174 1.610000e-26 132.0
120 TraesCS7D01G317400 chrUn 90.323 93 6 3 3612 3703 81299914 81300004 1.250000e-22 119.0
121 TraesCS7D01G317400 chrUn 88.776 98 6 4 3609 3705 65789159 65789066 1.620000e-21 115.0
122 TraesCS7D01G317400 chrUn 91.765 85 4 2 3612 3696 65789075 65789156 1.620000e-21 115.0
123 TraesCS7D01G317400 chrUn 88.542 96 9 2 3602 3696 100223729 100223823 1.620000e-21 115.0
124 TraesCS7D01G317400 chrUn 88.660 97 6 5 3602 3696 6371278 6371185 5.830000e-21 113.0
125 TraesCS7D01G317400 chrUn 87.129 101 12 1 3597 3696 12516539 12516639 5.830000e-21 113.0
126 TraesCS7D01G317400 chrUn 88.660 97 6 5 3602 3696 45427567 45427660 5.830000e-21 113.0
127 TraesCS7D01G317400 chrUn 88.542 96 7 4 3610 3704 67634373 67634465 5.830000e-21 113.0
128 TraesCS7D01G317400 chrUn 89.773 88 9 0 3612 3699 81299998 81299911 5.830000e-21 113.0
129 TraesCS7D01G317400 chrUn 88.660 97 6 5 3602 3696 101528729 101528822 5.830000e-21 113.0
130 TraesCS7D01G317400 chrUn 96.721 61 1 1 6526 6585 63661363 63661423 4.540000e-17 100.0
131 TraesCS7D01G317400 chrUn 94.915 59 2 1 6528 6585 99524389 99524331 2.730000e-14 91.6
132 TraesCS7D01G317400 chrUn 94.828 58 2 1 6529 6585 71119891 71119948 9.830000e-14 89.8
133 TraesCS7D01G317400 chrUn 91.803 61 4 1 6526 6585 47881115 47881175 4.570000e-12 84.2
134 TraesCS7D01G317400 chrUn 92.857 56 3 1 6531 6585 287282261 287282316 5.910000e-11 80.5
135 TraesCS7D01G317400 chrUn 90.164 61 5 1 6526 6585 230305001 230305061 2.130000e-10 78.7
136 TraesCS7D01G317400 chrUn 90.164 61 5 1 6526 6585 347349673 347349733 2.130000e-10 78.7
137 TraesCS7D01G317400 chrUn 87.879 66 7 1 6531 6596 23280550 23280614 7.650000e-10 76.8
138 TraesCS7D01G317400 chrUn 91.228 57 4 1 6536 6592 91330138 91330083 7.650000e-10 76.8
139 TraesCS7D01G317400 chrUn 88.710 62 6 1 6531 6591 147133882 147133821 2.750000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G317400 chr7D 403807046 403814156 7110 True 13132.0 13132 100.0000 1 7111 1 chr7D.!!$R2 7110
1 TraesCS7D01G317400 chr7A 462441887 462448261 6374 True 1668.2 3982 93.6368 783 7111 5 chr7A.!!$R2 6328
2 TraesCS7D01G317400 chr7B 413252690 413260020 7330 True 1066.5 2745 95.9964 1 7111 10 chr7B.!!$R1 7110

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
353 356 0.030773 TATAGCGTGCTTGCGAGGAG 59.969 55.000 2.37 0.00 40.67 3.69 F
690 724 0.179089 CAAGACCGAGCTCCATGGAG 60.179 60.000 33.73 33.73 44.56 3.86 F
726 760 0.321653 AATATCCGGCTTGCGGGATC 60.322 55.000 29.32 0.00 42.01 3.36 F
1587 1637 0.395586 TGCCACAACAGCAAGAAGGT 60.396 50.000 0.00 0.00 37.28 3.50 F
3283 3472 1.200020 ACTTTAGCGCAAGTGCAATCC 59.800 47.619 11.47 0.00 42.21 3.01 F
4509 4721 1.195442 TGATGCGTTACCTCCCCACA 61.195 55.000 0.00 0.00 0.00 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2108 2158 0.251077 ACGTGAACTACTCCCTCCGT 60.251 55.000 0.0 0.0 0.00 4.69 R
2109 2159 0.886563 AACGTGAACTACTCCCTCCG 59.113 55.000 0.0 0.0 0.00 4.63 R
2112 2162 1.692519 AGCAAACGTGAACTACTCCCT 59.307 47.619 0.0 0.0 0.00 4.20 R
3505 3694 1.737793 CTACAACCCAATCAAGCCGAC 59.262 52.381 0.0 0.0 0.00 4.79 R
4735 4948 0.741326 ACCGTCCATGAGATGAGACG 59.259 55.000 11.5 11.5 45.21 4.18 R
6423 6982 0.033109 AGAATGGGCTTGGGGCTTAC 60.033 55.000 0.0 0.0 41.46 2.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 3.017442 GTCCTTAGCATTTTGAGGGGTC 58.983 50.000 0.00 0.00 0.00 4.46
29 30 2.507407 TAGCATTTTGAGGGGTCCAC 57.493 50.000 0.00 0.00 0.00 4.02
48 49 3.400255 CACATCTCTAGTCCATGCCATG 58.600 50.000 0.00 0.00 0.00 3.66
54 55 4.164796 TCTCTAGTCCATGCCATGTCAATT 59.835 41.667 3.63 0.00 0.00 2.32
161 162 5.682862 GGATTAGTTGCACTTTCAATATGCG 59.317 40.000 0.00 0.00 42.44 4.73
218 219 7.093945 ACACCAAACATGTCCCAAGTTTATATC 60.094 37.037 0.00 0.00 33.88 1.63
268 269 3.691118 TGCTGAACCATCACAATAAGAGC 59.309 43.478 0.00 0.00 0.00 4.09
292 293 8.487176 AGCGAAAAACATATAAAAGTGCAAAAG 58.513 29.630 0.00 0.00 0.00 2.27
325 327 7.867445 AAAGTGCTATGTTTTTCCAATTACG 57.133 32.000 0.00 0.00 0.00 3.18
345 348 5.291293 ACGTTTTCATTTATAGCGTGCTT 57.709 34.783 0.00 0.00 0.00 3.91
349 352 2.545731 TCATTTATAGCGTGCTTGCGA 58.454 42.857 0.00 0.00 40.67 5.10
350 353 2.539688 TCATTTATAGCGTGCTTGCGAG 59.460 45.455 0.00 0.00 40.67 5.03
351 354 1.286501 TTTATAGCGTGCTTGCGAGG 58.713 50.000 2.37 0.00 40.67 4.63
352 355 0.458260 TTATAGCGTGCTTGCGAGGA 59.542 50.000 2.37 0.00 40.67 3.71
353 356 0.030773 TATAGCGTGCTTGCGAGGAG 59.969 55.000 2.37 0.00 40.67 3.69
354 357 1.667154 ATAGCGTGCTTGCGAGGAGA 61.667 55.000 2.37 0.00 40.67 3.71
355 358 1.873270 TAGCGTGCTTGCGAGGAGAA 61.873 55.000 2.37 0.00 40.67 2.87
356 359 3.016474 GCGTGCTTGCGAGGAGAAC 62.016 63.158 2.37 0.00 0.00 3.01
357 360 1.664649 CGTGCTTGCGAGGAGAACA 60.665 57.895 2.37 0.00 0.00 3.18
358 361 1.621301 CGTGCTTGCGAGGAGAACAG 61.621 60.000 2.37 0.00 0.00 3.16
359 362 0.319900 GTGCTTGCGAGGAGAACAGA 60.320 55.000 2.37 0.00 0.00 3.41
360 363 0.319900 TGCTTGCGAGGAGAACAGAC 60.320 55.000 2.37 0.00 0.00 3.51
361 364 1.347817 GCTTGCGAGGAGAACAGACG 61.348 60.000 2.37 0.00 0.00 4.18
363 366 0.387929 TTGCGAGGAGAACAGACGTT 59.612 50.000 0.00 0.00 38.33 3.99
364 367 0.387929 TGCGAGGAGAACAGACGTTT 59.612 50.000 0.00 0.00 34.75 3.60
365 368 0.784778 GCGAGGAGAACAGACGTTTG 59.215 55.000 4.25 4.25 34.75 2.93
366 369 1.419374 CGAGGAGAACAGACGTTTGG 58.581 55.000 11.17 0.00 34.75 3.28
368 371 0.759346 AGGAGAACAGACGTTTGGCT 59.241 50.000 11.17 7.20 34.75 4.75
369 372 1.149148 GGAGAACAGACGTTTGGCTC 58.851 55.000 17.37 17.37 34.75 4.70
370 373 1.149148 GAGAACAGACGTTTGGCTCC 58.851 55.000 11.17 0.00 34.75 4.70
371 374 0.250338 AGAACAGACGTTTGGCTCCC 60.250 55.000 11.17 0.00 34.75 4.30
372 375 1.566018 GAACAGACGTTTGGCTCCCG 61.566 60.000 11.17 0.00 34.75 5.14
373 376 2.742372 CAGACGTTTGGCTCCCGG 60.742 66.667 0.00 0.00 0.00 5.73
374 377 4.016706 AGACGTTTGGCTCCCGGG 62.017 66.667 16.85 16.85 0.00 5.73
376 410 3.952628 GACGTTTGGCTCCCGGGAG 62.953 68.421 41.29 41.29 44.56 4.30
384 418 3.554342 CTCCCGGGAGCCATGGAG 61.554 72.222 36.90 12.91 36.38 3.86
389 423 1.533711 CGGGAGCCATGGAGGAATT 59.466 57.895 18.40 0.00 41.22 2.17
391 425 1.686115 CGGGAGCCATGGAGGAATTTT 60.686 52.381 18.40 0.00 41.22 1.82
464 498 8.940768 AAAAATGTGCAAGTAAACAAGTATGT 57.059 26.923 0.00 0.00 43.14 2.29
512 546 9.393249 TCAGAATGAAAAACGTTGAAATATGAC 57.607 29.630 0.00 0.00 45.97 3.06
513 547 8.357966 CAGAATGAAAAACGTTGAAATATGACG 58.642 33.333 0.00 0.00 39.69 4.35
521 555 6.528014 ACGTTGAAATATGACGTGTACAAA 57.472 33.333 0.00 0.00 46.86 2.83
522 556 6.946165 ACGTTGAAATATGACGTGTACAAAA 58.054 32.000 0.00 0.00 46.86 2.44
523 557 7.408123 ACGTTGAAATATGACGTGTACAAAAA 58.592 30.769 0.00 0.00 46.86 1.94
524 558 7.584847 ACGTTGAAATATGACGTGTACAAAAAG 59.415 33.333 0.00 0.00 46.86 2.27
525 559 7.794810 CGTTGAAATATGACGTGTACAAAAAGA 59.205 33.333 0.00 0.00 32.52 2.52
526 560 8.889000 GTTGAAATATGACGTGTACAAAAAGAC 58.111 33.333 0.00 0.00 0.00 3.01
527 561 8.144155 TGAAATATGACGTGTACAAAAAGACA 57.856 30.769 0.00 0.00 0.00 3.41
528 562 8.613482 TGAAATATGACGTGTACAAAAAGACAA 58.387 29.630 0.00 0.00 0.00 3.18
529 563 9.440784 GAAATATGACGTGTACAAAAAGACAAA 57.559 29.630 0.00 0.00 0.00 2.83
530 564 9.959749 AAATATGACGTGTACAAAAAGACAAAT 57.040 25.926 0.00 0.00 0.00 2.32
531 565 9.959749 AATATGACGTGTACAAAAAGACAAATT 57.040 25.926 0.00 0.00 0.00 1.82
532 566 7.908193 ATGACGTGTACAAAAAGACAAATTC 57.092 32.000 0.00 0.00 0.00 2.17
533 567 6.843208 TGACGTGTACAAAAAGACAAATTCA 58.157 32.000 0.00 0.00 0.00 2.57
534 568 7.476667 TGACGTGTACAAAAAGACAAATTCAT 58.523 30.769 0.00 0.00 0.00 2.57
535 569 7.430793 TGACGTGTACAAAAAGACAAATTCATG 59.569 33.333 0.00 0.00 0.00 3.07
536 570 7.476667 ACGTGTACAAAAAGACAAATTCATGA 58.523 30.769 0.00 0.00 0.00 3.07
537 571 7.431084 ACGTGTACAAAAAGACAAATTCATGAC 59.569 33.333 0.00 0.00 0.00 3.06
538 572 7.096640 CGTGTACAAAAAGACAAATTCATGACC 60.097 37.037 0.00 0.00 0.00 4.02
539 573 7.920682 GTGTACAAAAAGACAAATTCATGACCT 59.079 33.333 0.00 0.00 0.00 3.85
540 574 7.920151 TGTACAAAAAGACAAATTCATGACCTG 59.080 33.333 0.00 0.00 0.00 4.00
541 575 6.282930 ACAAAAAGACAAATTCATGACCTGG 58.717 36.000 0.00 0.00 0.00 4.45
542 576 5.473066 AAAAGACAAATTCATGACCTGGG 57.527 39.130 0.00 0.00 0.00 4.45
543 577 3.091633 AGACAAATTCATGACCTGGGG 57.908 47.619 0.00 0.00 0.00 4.96
544 578 2.102578 GACAAATTCATGACCTGGGGG 58.897 52.381 0.00 0.00 38.88 5.40
563 597 5.505181 GGGGGATGAATAGTATCATGTGT 57.495 43.478 0.00 0.00 40.08 3.72
564 598 5.880901 GGGGGATGAATAGTATCATGTGTT 58.119 41.667 0.00 0.00 40.08 3.32
565 599 7.016153 GGGGGATGAATAGTATCATGTGTTA 57.984 40.000 0.00 0.00 40.08 2.41
566 600 7.458397 GGGGGATGAATAGTATCATGTGTTAA 58.542 38.462 0.00 0.00 40.08 2.01
567 601 7.942341 GGGGGATGAATAGTATCATGTGTTAAA 59.058 37.037 0.00 0.00 40.08 1.52
568 602 9.349713 GGGGATGAATAGTATCATGTGTTAAAA 57.650 33.333 0.00 0.00 40.08 1.52
606 640 9.689976 TTTGACCTGAAAATTTACACACATATG 57.310 29.630 0.00 0.00 0.00 1.78
607 641 8.402798 TGACCTGAAAATTTACACACATATGT 57.597 30.769 1.41 1.41 40.80 2.29
678 712 8.997960 CAACAAAATTCAAAATTTTCAAGACCG 58.002 29.630 0.00 0.00 0.00 4.79
679 713 8.485976 ACAAAATTCAAAATTTTCAAGACCGA 57.514 26.923 0.00 0.00 0.00 4.69
680 714 8.603181 ACAAAATTCAAAATTTTCAAGACCGAG 58.397 29.630 0.00 0.00 0.00 4.63
681 715 6.769608 AATTCAAAATTTTCAAGACCGAGC 57.230 33.333 0.00 0.00 0.00 5.03
682 716 5.514274 TTCAAAATTTTCAAGACCGAGCT 57.486 34.783 0.00 0.00 0.00 4.09
683 717 5.108385 TCAAAATTTTCAAGACCGAGCTC 57.892 39.130 2.73 2.73 0.00 4.09
684 718 4.023193 TCAAAATTTTCAAGACCGAGCTCC 60.023 41.667 8.47 0.00 0.00 4.70
685 719 2.859165 ATTTTCAAGACCGAGCTCCA 57.141 45.000 8.47 0.00 0.00 3.86
686 720 2.859165 TTTTCAAGACCGAGCTCCAT 57.141 45.000 8.47 0.00 0.00 3.41
687 721 2.099141 TTTCAAGACCGAGCTCCATG 57.901 50.000 8.47 0.00 0.00 3.66
688 722 0.250234 TTCAAGACCGAGCTCCATGG 59.750 55.000 4.97 4.97 0.00 3.66
689 723 0.614697 TCAAGACCGAGCTCCATGGA 60.615 55.000 15.27 15.27 0.00 3.41
690 724 0.179089 CAAGACCGAGCTCCATGGAG 60.179 60.000 33.73 33.73 44.56 3.86
698 732 3.160047 CTCCATGGAGCTCGGCCT 61.160 66.667 28.45 0.00 35.31 5.19
699 733 3.157252 TCCATGGAGCTCGGCCTC 61.157 66.667 11.44 0.00 0.00 4.70
704 738 3.133946 GGAGCTCGGCCTCCTAAG 58.866 66.667 7.83 0.00 46.39 2.18
705 739 1.455959 GGAGCTCGGCCTCCTAAGA 60.456 63.158 7.83 0.00 46.39 2.10
706 740 1.737201 GAGCTCGGCCTCCTAAGAC 59.263 63.158 0.00 0.00 0.00 3.01
707 741 1.000486 AGCTCGGCCTCCTAAGACA 60.000 57.895 0.00 0.00 0.00 3.41
708 742 0.614979 AGCTCGGCCTCCTAAGACAA 60.615 55.000 0.00 0.00 0.00 3.18
709 743 0.466124 GCTCGGCCTCCTAAGACAAT 59.534 55.000 0.00 0.00 0.00 2.71
710 744 1.687123 GCTCGGCCTCCTAAGACAATA 59.313 52.381 0.00 0.00 0.00 1.90
711 745 2.300437 GCTCGGCCTCCTAAGACAATAT 59.700 50.000 0.00 0.00 0.00 1.28
712 746 3.615351 GCTCGGCCTCCTAAGACAATATC 60.615 52.174 0.00 0.00 0.00 1.63
713 747 2.897969 TCGGCCTCCTAAGACAATATCC 59.102 50.000 0.00 0.00 0.00 2.59
714 748 2.352814 CGGCCTCCTAAGACAATATCCG 60.353 54.545 0.00 0.00 0.00 4.18
715 749 2.028020 GGCCTCCTAAGACAATATCCGG 60.028 54.545 0.00 0.00 0.00 5.14
716 750 2.613223 GCCTCCTAAGACAATATCCGGC 60.613 54.545 0.00 0.00 0.00 6.13
717 751 2.900546 CCTCCTAAGACAATATCCGGCT 59.099 50.000 0.00 0.00 0.00 5.52
718 752 3.325135 CCTCCTAAGACAATATCCGGCTT 59.675 47.826 0.00 0.00 0.00 4.35
719 753 4.310769 CTCCTAAGACAATATCCGGCTTG 58.689 47.826 0.00 2.91 0.00 4.01
720 754 2.808543 CCTAAGACAATATCCGGCTTGC 59.191 50.000 0.00 0.00 0.00 4.01
721 755 1.299541 AAGACAATATCCGGCTTGCG 58.700 50.000 0.00 0.00 0.00 4.85
722 756 0.532862 AGACAATATCCGGCTTGCGG 60.533 55.000 0.00 0.00 0.00 5.69
723 757 1.507141 GACAATATCCGGCTTGCGGG 61.507 60.000 12.22 12.22 0.00 6.13
724 758 1.227823 CAATATCCGGCTTGCGGGA 60.228 57.895 21.12 21.12 36.61 5.14
725 759 0.606401 CAATATCCGGCTTGCGGGAT 60.606 55.000 28.72 28.72 44.92 3.85
726 760 0.321653 AATATCCGGCTTGCGGGATC 60.322 55.000 29.32 0.00 42.01 3.36
727 761 2.185310 ATATCCGGCTTGCGGGATCC 62.185 60.000 29.32 1.92 42.01 3.36
729 763 4.489771 CCGGCTTGCGGGATCCTT 62.490 66.667 12.58 0.00 0.00 3.36
730 764 2.438434 CGGCTTGCGGGATCCTTT 60.438 61.111 12.58 0.00 0.00 3.11
731 765 1.153249 CGGCTTGCGGGATCCTTTA 60.153 57.895 12.58 0.00 0.00 1.85
732 766 0.535102 CGGCTTGCGGGATCCTTTAT 60.535 55.000 12.58 0.00 0.00 1.40
1155 1192 2.109126 GCCATCAGAGGTTGCCGAC 61.109 63.158 0.00 0.00 0.00 4.79
1266 1303 3.799755 GGCAACGGCGCAGGTTAG 61.800 66.667 13.26 9.82 42.47 2.34
1324 1362 3.056607 TGCGTTGTACCTAGGGTTTACTC 60.057 47.826 14.81 1.87 37.09 2.59
1351 1389 1.840741 CGACGATTCTAGCGTGTCAAG 59.159 52.381 0.00 0.00 42.77 3.02
1364 1402 1.336755 GTGTCAAGCATGGTCGGTTTT 59.663 47.619 0.00 0.00 0.00 2.43
1369 1407 1.523758 AGCATGGTCGGTTTTGTCTC 58.476 50.000 0.00 0.00 0.00 3.36
1378 1416 1.676006 CGGTTTTGTCTCAAGCTTGGT 59.324 47.619 25.73 0.00 0.00 3.67
1389 1427 1.084289 AAGCTTGGTTCGTAATCCGC 58.916 50.000 0.00 0.00 36.19 5.54
1568 1618 1.542108 GGAGACTGCAACTCAAGCACT 60.542 52.381 18.11 0.00 37.02 4.40
1587 1637 0.395586 TGCCACAACAGCAAGAAGGT 60.396 50.000 0.00 0.00 37.28 3.50
1641 1691 3.891366 GCCTAATTGATGTGCCCAATACT 59.109 43.478 0.00 0.00 33.51 2.12
1657 1707 7.002276 GCCCAATACTAAGGTATAACCATTGT 58.998 38.462 0.00 0.00 41.95 2.71
1764 1814 5.215160 GCTTATGCTAATGGTGGAAATTCG 58.785 41.667 0.00 0.00 36.03 3.34
1784 1834 2.423577 GTGCAGGTCGGTGTTCTAATT 58.576 47.619 0.00 0.00 0.00 1.40
1793 1843 4.023536 GTCGGTGTTCTAATTGGAAAAGCA 60.024 41.667 19.94 6.91 32.33 3.91
1802 1852 2.861462 TTGGAAAAGCAGGTGAAACG 57.139 45.000 0.00 0.00 38.12 3.60
1862 1912 4.978083 AATCACAAAGGATGCAGATGTC 57.022 40.909 0.00 0.00 30.22 3.06
1982 2032 6.985188 TGCTAAATGTATCAACTTCCTCAC 57.015 37.500 0.00 0.00 0.00 3.51
1989 2039 2.721425 TCAACTTCCTCACGGGTTTT 57.279 45.000 0.00 0.00 36.25 2.43
1990 2040 3.007473 TCAACTTCCTCACGGGTTTTT 57.993 42.857 0.00 0.00 36.25 1.94
1991 2041 4.153673 TCAACTTCCTCACGGGTTTTTA 57.846 40.909 0.00 0.00 36.25 1.52
1992 2042 4.131596 TCAACTTCCTCACGGGTTTTTAG 58.868 43.478 0.00 0.00 36.25 1.85
1993 2043 3.851458 ACTTCCTCACGGGTTTTTAGT 57.149 42.857 0.00 0.00 36.25 2.24
1994 2044 4.961438 ACTTCCTCACGGGTTTTTAGTA 57.039 40.909 0.00 0.00 36.25 1.82
1995 2045 4.635223 ACTTCCTCACGGGTTTTTAGTAC 58.365 43.478 0.00 0.00 36.25 2.73
1996 2046 4.346127 ACTTCCTCACGGGTTTTTAGTACT 59.654 41.667 0.00 0.00 36.25 2.73
1997 2047 4.525912 TCCTCACGGGTTTTTAGTACTC 57.474 45.455 0.00 0.00 36.25 2.59
1998 2048 3.259123 TCCTCACGGGTTTTTAGTACTCC 59.741 47.826 0.00 0.00 36.25 3.85
1999 2049 3.593096 CTCACGGGTTTTTAGTACTCCC 58.407 50.000 0.00 2.07 35.22 4.30
2000 2050 3.242011 TCACGGGTTTTTAGTACTCCCT 58.758 45.455 13.27 0.50 36.30 4.20
2001 2051 3.259123 TCACGGGTTTTTAGTACTCCCTC 59.741 47.826 13.27 0.00 36.30 4.30
2002 2052 2.568956 ACGGGTTTTTAGTACTCCCTCC 59.431 50.000 13.27 5.55 36.30 4.30
2003 2053 2.417787 CGGGTTTTTAGTACTCCCTCCG 60.418 54.545 13.27 10.25 36.30 4.63
2004 2054 2.568956 GGGTTTTTAGTACTCCCTCCGT 59.431 50.000 0.00 0.00 35.63 4.69
2005 2055 3.008375 GGGTTTTTAGTACTCCCTCCGTT 59.992 47.826 0.00 0.00 35.63 4.44
2006 2056 4.248859 GGTTTTTAGTACTCCCTCCGTTC 58.751 47.826 0.00 0.00 0.00 3.95
2007 2057 4.248859 GTTTTTAGTACTCCCTCCGTTCC 58.751 47.826 0.00 0.00 0.00 3.62
2008 2058 2.905415 TTAGTACTCCCTCCGTTCCA 57.095 50.000 0.00 0.00 0.00 3.53
2009 2059 2.905415 TAGTACTCCCTCCGTTCCAA 57.095 50.000 0.00 0.00 0.00 3.53
2010 2060 2.019807 AGTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
2011 2061 2.547990 AGTACTCCCTCCGTTCCAAAT 58.452 47.619 0.00 0.00 0.00 2.32
2012 2062 2.910977 AGTACTCCCTCCGTTCCAAATT 59.089 45.455 0.00 0.00 0.00 1.82
2013 2063 4.098894 AGTACTCCCTCCGTTCCAAATTA 58.901 43.478 0.00 0.00 0.00 1.40
2014 2064 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
2015 2065 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
2016 2066 3.329814 ACTCCCTCCGTTCCAAATTACTT 59.670 43.478 0.00 0.00 0.00 2.24
2017 2067 3.681593 TCCCTCCGTTCCAAATTACTTG 58.318 45.455 0.00 0.00 34.52 3.16
2018 2068 3.328343 TCCCTCCGTTCCAAATTACTTGA 59.672 43.478 0.00 0.00 37.17 3.02
2019 2069 3.439129 CCCTCCGTTCCAAATTACTTGAC 59.561 47.826 0.00 0.00 37.17 3.18
2020 2070 3.439129 CCTCCGTTCCAAATTACTTGACC 59.561 47.826 0.00 0.00 37.17 4.02
2021 2071 3.414269 TCCGTTCCAAATTACTTGACCC 58.586 45.455 0.00 0.00 37.17 4.46
2022 2072 3.150767 CCGTTCCAAATTACTTGACCCA 58.849 45.455 0.00 0.00 37.17 4.51
2023 2073 3.761752 CCGTTCCAAATTACTTGACCCAT 59.238 43.478 0.00 0.00 37.17 4.00
2024 2074 4.944930 CCGTTCCAAATTACTTGACCCATA 59.055 41.667 0.00 0.00 37.17 2.74
2025 2075 5.592688 CCGTTCCAAATTACTTGACCCATAT 59.407 40.000 0.00 0.00 37.17 1.78
2026 2076 6.096282 CCGTTCCAAATTACTTGACCCATATT 59.904 38.462 0.00 0.00 37.17 1.28
2027 2077 7.363443 CCGTTCCAAATTACTTGACCCATATTT 60.363 37.037 0.00 0.00 37.17 1.40
2028 2078 8.679100 CGTTCCAAATTACTTGACCCATATTTA 58.321 33.333 0.00 0.00 37.17 1.40
2038 2088 7.434492 ACTTGACCCATATTTATCTAGACACG 58.566 38.462 0.00 0.00 0.00 4.49
2039 2089 6.340962 TGACCCATATTTATCTAGACACGG 57.659 41.667 0.00 0.00 0.00 4.94
2040 2090 6.072649 TGACCCATATTTATCTAGACACGGA 58.927 40.000 0.00 0.00 0.00 4.69
2041 2091 6.724441 TGACCCATATTTATCTAGACACGGAT 59.276 38.462 0.00 0.00 0.00 4.18
2042 2092 6.936279 ACCCATATTTATCTAGACACGGATG 58.064 40.000 0.00 0.00 0.00 3.51
2043 2093 6.497259 ACCCATATTTATCTAGACACGGATGT 59.503 38.462 0.00 0.00 43.71 3.06
2044 2094 7.672660 ACCCATATTTATCTAGACACGGATGTA 59.327 37.037 0.00 0.00 39.95 2.29
2045 2095 8.696374 CCCATATTTATCTAGACACGGATGTAT 58.304 37.037 0.00 0.00 39.95 2.29
2046 2096 9.737427 CCATATTTATCTAGACACGGATGTATC 57.263 37.037 0.00 0.00 39.95 2.24
2050 2100 9.961264 ATTTATCTAGACACGGATGTATCTAGA 57.039 33.333 13.87 13.87 42.25 2.43
2051 2101 8.774890 TTATCTAGACACGGATGTATCTAGAC 57.225 38.462 13.81 0.00 41.50 2.59
2052 2102 6.170846 TCTAGACACGGATGTATCTAGACA 57.829 41.667 8.86 0.00 37.36 3.41
2053 2103 5.990386 TCTAGACACGGATGTATCTAGACAC 59.010 44.000 8.86 0.00 37.36 3.67
2054 2104 4.783055 AGACACGGATGTATCTAGACACT 58.217 43.478 2.29 0.00 39.95 3.55
2055 2105 5.926663 AGACACGGATGTATCTAGACACTA 58.073 41.667 2.29 0.00 39.95 2.74
2056 2106 6.354938 AGACACGGATGTATCTAGACACTAA 58.645 40.000 2.29 0.00 39.95 2.24
2057 2107 6.827251 AGACACGGATGTATCTAGACACTAAA 59.173 38.462 2.29 0.00 39.95 1.85
2058 2108 6.793349 ACACGGATGTATCTAGACACTAAAC 58.207 40.000 2.29 0.00 37.26 2.01
2059 2109 6.376299 ACACGGATGTATCTAGACACTAAACA 59.624 38.462 2.29 0.00 37.26 2.83
2060 2110 7.094075 ACACGGATGTATCTAGACACTAAACAA 60.094 37.037 2.29 0.00 37.26 2.83
2061 2111 7.432545 CACGGATGTATCTAGACACTAAACAAG 59.567 40.741 2.29 0.00 30.52 3.16
2062 2112 7.122353 ACGGATGTATCTAGACACTAAACAAGT 59.878 37.037 2.29 0.00 39.81 3.16
2063 2113 8.618677 CGGATGTATCTAGACACTAAACAAGTA 58.381 37.037 2.29 0.00 35.76 2.24
2075 2125 9.395707 GACACTAAACAAGTATAGATACATCCG 57.604 37.037 2.66 0.00 35.76 4.18
2076 2126 8.910944 ACACTAAACAAGTATAGATACATCCGT 58.089 33.333 2.66 0.00 35.76 4.69
2111 2161 9.471084 AAATTTAAGTCAACTAATTTGGAACGG 57.529 29.630 0.00 0.00 35.69 4.44
2112 2162 7.804843 TTTAAGTCAACTAATTTGGAACGGA 57.195 32.000 0.00 0.00 35.69 4.69
2113 2163 5.941948 AAGTCAACTAATTTGGAACGGAG 57.058 39.130 0.00 0.00 35.69 4.63
2114 2164 4.324267 AGTCAACTAATTTGGAACGGAGG 58.676 43.478 0.00 0.00 35.69 4.30
2115 2165 3.439129 GTCAACTAATTTGGAACGGAGGG 59.561 47.826 0.00 0.00 35.69 4.30
2330 2380 2.682155 TCCAACTGTTTTGTTTGCCC 57.318 45.000 0.00 0.00 0.00 5.36
2852 2974 6.479001 ACTTGGTACGAAATCATAGCATGTAC 59.521 38.462 5.73 0.00 36.19 2.90
2916 3039 5.063204 ACAACTGCTTTTAGCTATGTCACA 58.937 37.500 0.00 0.00 42.97 3.58
2931 3054 8.730680 AGCTATGTCACAATTTTGGTAGTTAAG 58.269 33.333 0.00 0.00 0.00 1.85
3057 3182 7.937394 TCGTCTATGAATAAGACTGGAGATGTA 59.063 37.037 2.15 0.00 41.02 2.29
3241 3430 7.042523 AGCTTTGCATCTTGTAAATTTGAACAC 60.043 33.333 0.00 0.00 31.84 3.32
3280 3469 3.843632 CACTTTAGCGCAAGTGCAA 57.156 47.368 22.75 1.12 45.43 4.08
3283 3472 1.200020 ACTTTAGCGCAAGTGCAATCC 59.800 47.619 11.47 0.00 42.21 3.01
3505 3694 3.332034 TCAATCAGTCAGTGACATGCAG 58.668 45.455 24.73 11.55 38.28 4.41
3576 3773 8.501580 GTGGGTTATTTGTTACTGTTAGAGTTC 58.498 37.037 0.00 0.00 35.96 3.01
3609 3806 7.609532 CCACCAAATTTTGCCCTGAAATATTTA 59.390 33.333 0.00 0.00 0.00 1.40
3610 3807 8.667463 CACCAAATTTTGCCCTGAAATATTTAG 58.333 33.333 0.00 0.00 0.00 1.85
3611 3808 8.382405 ACCAAATTTTGCCCTGAAATATTTAGT 58.618 29.630 0.00 0.00 0.00 2.24
3612 3809 9.883142 CCAAATTTTGCCCTGAAATATTTAGTA 57.117 29.630 0.00 0.00 0.00 1.82
3616 3813 7.875327 TTTGCCCTGAAATATTTAGTACTCC 57.125 36.000 0.00 0.00 0.00 3.85
3617 3814 5.937111 TGCCCTGAAATATTTAGTACTCCC 58.063 41.667 0.00 0.00 0.00 4.30
3618 3815 5.670361 TGCCCTGAAATATTTAGTACTCCCT 59.330 40.000 0.00 0.00 0.00 4.20
3619 3816 6.183361 TGCCCTGAAATATTTAGTACTCCCTC 60.183 42.308 0.00 0.00 0.00 4.30
3620 3817 6.043358 GCCCTGAAATATTTAGTACTCCCTCT 59.957 42.308 0.00 0.00 0.00 3.69
3621 3818 7.445945 CCCTGAAATATTTAGTACTCCCTCTG 58.554 42.308 0.00 0.00 0.00 3.35
3622 3819 7.071321 CCCTGAAATATTTAGTACTCCCTCTGT 59.929 40.741 0.00 0.00 0.00 3.41
3623 3820 8.145122 CCTGAAATATTTAGTACTCCCTCTGTC 58.855 40.741 0.00 0.00 0.00 3.51
3624 3821 8.019656 TGAAATATTTAGTACTCCCTCTGTCC 57.980 38.462 0.00 0.00 0.00 4.02
3625 3822 6.997942 AATATTTAGTACTCCCTCTGTCCC 57.002 41.667 0.00 0.00 0.00 4.46
3626 3823 3.839323 TTTAGTACTCCCTCTGTCCCA 57.161 47.619 0.00 0.00 0.00 4.37
3627 3824 4.348020 TTTAGTACTCCCTCTGTCCCAT 57.652 45.455 0.00 0.00 0.00 4.00
3628 3825 5.476950 TTTAGTACTCCCTCTGTCCCATA 57.523 43.478 0.00 0.00 0.00 2.74
3629 3826 5.476950 TTAGTACTCCCTCTGTCCCATAA 57.523 43.478 0.00 0.00 0.00 1.90
3630 3827 4.561254 AGTACTCCCTCTGTCCCATAAT 57.439 45.455 0.00 0.00 0.00 1.28
3631 3828 5.681494 AGTACTCCCTCTGTCCCATAATA 57.319 43.478 0.00 0.00 0.00 0.98
3632 3829 6.234404 AGTACTCCCTCTGTCCCATAATAT 57.766 41.667 0.00 0.00 0.00 1.28
3633 3830 7.358255 AGTACTCCCTCTGTCCCATAATATA 57.642 40.000 0.00 0.00 0.00 0.86
3634 3831 7.776745 AGTACTCCCTCTGTCCCATAATATAA 58.223 38.462 0.00 0.00 0.00 0.98
3635 3832 7.896496 AGTACTCCCTCTGTCCCATAATATAAG 59.104 40.741 0.00 0.00 0.00 1.73
3636 3833 6.875469 ACTCCCTCTGTCCCATAATATAAGA 58.125 40.000 0.00 0.00 0.00 2.10
3637 3834 7.313731 ACTCCCTCTGTCCCATAATATAAGAA 58.686 38.462 0.00 0.00 0.00 2.52
3638 3835 7.235812 ACTCCCTCTGTCCCATAATATAAGAAC 59.764 40.741 0.00 0.00 0.00 3.01
3639 3836 6.210784 TCCCTCTGTCCCATAATATAAGAACG 59.789 42.308 0.00 0.00 0.00 3.95
3640 3837 6.014499 CCCTCTGTCCCATAATATAAGAACGT 60.014 42.308 0.00 0.00 0.00 3.99
3641 3838 7.442656 CCTCTGTCCCATAATATAAGAACGTT 58.557 38.462 0.00 0.00 0.00 3.99
3642 3839 7.931948 CCTCTGTCCCATAATATAAGAACGTTT 59.068 37.037 0.46 0.00 0.00 3.60
3643 3840 9.326413 CTCTGTCCCATAATATAAGAACGTTTT 57.674 33.333 0.46 0.00 0.00 2.43
3644 3841 9.675464 TCTGTCCCATAATATAAGAACGTTTTT 57.325 29.630 9.22 9.22 0.00 1.94
3645 3842 9.931210 CTGTCCCATAATATAAGAACGTTTTTC 57.069 33.333 7.42 0.00 0.00 2.29
3646 3843 9.451002 TGTCCCATAATATAAGAACGTTTTTCA 57.549 29.630 7.42 0.00 0.00 2.69
3649 3846 9.233232 CCCATAATATAAGAACGTTTTTCAAGC 57.767 33.333 7.42 0.00 0.00 4.01
3683 3880 9.233232 GCTTCAAAAACGTTCTTATATTATGGG 57.767 33.333 0.00 0.00 0.00 4.00
3686 3883 8.605746 TCAAAAACGTTCTTATATTATGGGACG 58.394 33.333 0.00 9.33 0.00 4.79
3687 3884 7.486802 AAAACGTTCTTATATTATGGGACGG 57.513 36.000 0.00 1.76 0.00 4.79
3688 3885 6.409524 AACGTTCTTATATTATGGGACGGA 57.590 37.500 0.00 0.00 0.00 4.69
3689 3886 6.022163 ACGTTCTTATATTATGGGACGGAG 57.978 41.667 13.18 0.00 0.00 4.63
3690 3887 5.047519 ACGTTCTTATATTATGGGACGGAGG 60.048 44.000 13.18 0.00 0.00 4.30
3691 3888 5.623824 CGTTCTTATATTATGGGACGGAGGG 60.624 48.000 0.00 0.00 0.00 4.30
3798 3996 4.435425 CCCATCATGTTATTGTGCTTTGG 58.565 43.478 0.00 0.00 0.00 3.28
3822 4020 4.092821 TGCAGTATCAGCACGAAACATAAC 59.907 41.667 0.00 0.00 37.02 1.89
3887 4095 5.418840 GGTTCACCACCAGTTCATATTGAAT 59.581 40.000 0.00 0.00 46.42 2.57
3889 4097 5.814481 TCACCACCAGTTCATATTGAATGA 58.186 37.500 0.00 0.00 38.79 2.57
3993 4205 3.889538 GCCCTATGTTTTTACCTGATCCC 59.110 47.826 0.00 0.00 0.00 3.85
4251 4463 3.815401 GGATATTGATCGTTGTCCCTTGG 59.185 47.826 0.54 0.00 32.28 3.61
4305 4517 2.449137 AAGGCTGCTTATGGCTGAAT 57.551 45.000 0.00 0.00 41.52 2.57
4306 4518 1.688772 AGGCTGCTTATGGCTGAATG 58.311 50.000 0.00 0.00 41.52 2.67
4323 4535 5.764686 GCTGAATGGGAAAGAAAAACCAATT 59.235 36.000 0.00 0.00 36.44 2.32
4509 4721 1.195442 TGATGCGTTACCTCCCCACA 61.195 55.000 0.00 0.00 0.00 4.17
4546 4758 3.581332 TCTGTCCCTTTATGAAGTTCGGT 59.419 43.478 0.00 0.00 0.00 4.69
4598 4811 2.164827 TGCATGTGATCTTGCCATGTTC 59.835 45.455 11.57 1.90 41.89 3.18
4617 4830 8.783093 CCATGTTCTTTATTTCTGAACTGTACA 58.217 33.333 0.00 0.00 40.27 2.90
4713 4926 5.771666 ACTGAATGTGATGATGGTCTTGTTT 59.228 36.000 0.00 0.00 0.00 2.83
4779 5034 1.892474 TCTATTGCCCTTTGTGTTGCC 59.108 47.619 0.00 0.00 0.00 4.52
4819 5074 6.601613 TGTCCACATAAGGGTATGAAATGTTC 59.398 38.462 0.87 0.00 39.72 3.18
4917 5400 9.807386 GTTGTACAACTTTGATATGACAGTTAC 57.193 33.333 27.69 0.00 38.25 2.50
4960 5445 6.995091 ACATCTTATATCCAGCCTTTGTCTTC 59.005 38.462 0.00 0.00 0.00 2.87
4961 5446 5.601662 TCTTATATCCAGCCTTTGTCTTCG 58.398 41.667 0.00 0.00 0.00 3.79
4962 5447 2.024176 TATCCAGCCTTTGTCTTCGC 57.976 50.000 0.00 0.00 0.00 4.70
4963 5448 0.678048 ATCCAGCCTTTGTCTTCGCC 60.678 55.000 0.00 0.00 0.00 5.54
4964 5449 1.600636 CCAGCCTTTGTCTTCGCCA 60.601 57.895 0.00 0.00 0.00 5.69
4965 5450 0.962356 CCAGCCTTTGTCTTCGCCAT 60.962 55.000 0.00 0.00 0.00 4.40
4966 5451 0.449388 CAGCCTTTGTCTTCGCCATC 59.551 55.000 0.00 0.00 0.00 3.51
5063 5548 1.597742 GCTATGGTCCGCAACATCAT 58.402 50.000 0.00 0.00 0.00 2.45
5198 5683 2.746277 GGTTACCCACAGCAGCCG 60.746 66.667 0.00 0.00 0.00 5.52
5291 5776 2.185004 ACAAACAGGGATCTCAACCG 57.815 50.000 0.00 0.00 0.00 4.44
5387 5872 2.180946 ATGGACAGCCTCAGTATCCA 57.819 50.000 0.00 0.00 43.42 3.41
5765 6256 0.247736 GACCAGGGTACAGTCAGCAG 59.752 60.000 0.00 0.00 0.00 4.24
6203 6706 1.660560 CTTTGGGATGAGGCTTGCCG 61.661 60.000 5.95 0.00 0.00 5.69
6396 6955 0.885879 ACCAATGTGCTGTGCTGATG 59.114 50.000 0.00 0.00 0.00 3.07
6418 6977 4.816385 TGTTCTTTGAGAATGTGTCCTGAC 59.184 41.667 0.00 0.00 36.50 3.51
6420 6979 3.390967 TCTTTGAGAATGTGTCCTGACCA 59.609 43.478 0.00 0.00 0.00 4.02
6423 6982 3.678289 TGAGAATGTGTCCTGACCATTG 58.322 45.455 14.55 0.00 34.60 2.82
6426 6985 5.221823 TGAGAATGTGTCCTGACCATTGTAA 60.222 40.000 14.55 5.64 34.60 2.41
6427 6986 5.248640 AGAATGTGTCCTGACCATTGTAAG 58.751 41.667 14.55 0.00 34.60 2.34
6428 6987 2.778299 TGTGTCCTGACCATTGTAAGC 58.222 47.619 0.00 0.00 0.00 3.09
6429 6988 2.084546 GTGTCCTGACCATTGTAAGCC 58.915 52.381 0.00 0.00 0.00 4.35
6431 6990 0.623723 TCCTGACCATTGTAAGCCCC 59.376 55.000 0.00 0.00 0.00 5.80
6482 7041 9.132521 CTTACTGTCAAATCATTGGATTCAAAC 57.867 33.333 0.00 0.00 42.87 2.93
6506 7065 2.467880 TCACCAAGATGTACTCCCTCC 58.532 52.381 0.00 0.00 0.00 4.30
6551 7140 9.464714 ACGTGATTGATACATCTGTATTTAGAC 57.535 33.333 4.44 0.00 40.99 2.59
6664 7315 4.460263 AGTGTGGTTGAAATAGCAGACAA 58.540 39.130 0.00 0.00 40.88 3.18
6678 7329 4.147321 AGCAGACAAATGAGGTCATGTTT 58.853 39.130 0.00 0.00 37.74 2.83
6826 7759 5.414454 GTGCCAACTCTCAAATGTTACCATA 59.586 40.000 0.00 0.00 0.00 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 1.343075 TGGACTAGAGATGTGGACCCC 60.343 57.143 0.00 0.00 0.00 4.95
26 27 1.764723 TGGCATGGACTAGAGATGTGG 59.235 52.381 0.00 0.00 0.00 4.17
29 30 3.070590 TGACATGGCATGGACTAGAGATG 59.929 47.826 29.49 3.59 33.60 2.90
123 124 2.719705 ACTAATCCCTGGGTGGTTTTGA 59.280 45.455 13.56 0.00 0.00 2.69
124 125 3.169512 ACTAATCCCTGGGTGGTTTTG 57.830 47.619 13.56 6.52 0.00 2.44
128 129 0.331616 GCAACTAATCCCTGGGTGGT 59.668 55.000 13.56 0.00 0.00 4.16
129 130 0.331278 TGCAACTAATCCCTGGGTGG 59.669 55.000 13.56 0.00 0.00 4.61
171 172 7.042950 GGTGTTTGGTAACCTGTATTGTTTTT 58.957 34.615 0.00 0.00 33.15 1.94
172 173 6.154706 TGGTGTTTGGTAACCTGTATTGTTTT 59.845 34.615 0.00 0.00 37.36 2.43
173 174 5.657302 TGGTGTTTGGTAACCTGTATTGTTT 59.343 36.000 0.00 0.00 37.36 2.83
174 175 5.202004 TGGTGTTTGGTAACCTGTATTGTT 58.798 37.500 0.00 0.00 37.36 2.83
175 176 4.794334 TGGTGTTTGGTAACCTGTATTGT 58.206 39.130 0.00 0.00 37.36 2.71
176 177 5.776173 TTGGTGTTTGGTAACCTGTATTG 57.224 39.130 0.00 0.00 37.36 1.90
218 219 6.587608 GCCTTGAAGTGTCATCAATAAAAAGG 59.412 38.462 0.00 0.00 36.30 3.11
281 282 6.857451 CACTTTTTGCTTTTCTTTTGCACTTT 59.143 30.769 0.00 0.00 36.37 2.66
317 319 7.305190 GCACGCTATAAATGAAAACGTAATTGG 60.305 37.037 0.00 0.00 0.00 3.16
325 327 4.028509 CGCAAGCACGCTATAAATGAAAAC 60.029 41.667 0.00 0.00 0.00 2.43
345 348 0.387929 AAACGTCTGTTCTCCTCGCA 59.612 50.000 0.00 0.00 37.31 5.10
349 352 0.759346 AGCCAAACGTCTGTTCTCCT 59.241 50.000 0.00 0.00 37.31 3.69
350 353 1.149148 GAGCCAAACGTCTGTTCTCC 58.851 55.000 0.00 0.00 37.31 3.71
351 354 1.149148 GGAGCCAAACGTCTGTTCTC 58.851 55.000 0.00 0.00 37.31 2.87
352 355 0.250338 GGGAGCCAAACGTCTGTTCT 60.250 55.000 0.00 0.00 37.31 3.01
353 356 1.566018 CGGGAGCCAAACGTCTGTTC 61.566 60.000 0.00 0.00 37.31 3.18
354 357 1.597027 CGGGAGCCAAACGTCTGTT 60.597 57.895 0.00 0.00 40.98 3.16
355 358 2.030562 CGGGAGCCAAACGTCTGT 59.969 61.111 0.00 0.00 0.00 3.41
356 359 2.742372 CCGGGAGCCAAACGTCTG 60.742 66.667 0.00 0.00 0.00 3.51
357 360 4.016706 CCCGGGAGCCAAACGTCT 62.017 66.667 18.48 0.00 0.00 4.18
358 361 3.952628 CTCCCGGGAGCCAAACGTC 62.953 68.421 36.90 0.00 35.31 4.34
359 362 4.016706 CTCCCGGGAGCCAAACGT 62.017 66.667 36.90 0.00 35.31 3.99
370 373 1.999634 AATTCCTCCATGGCTCCCGG 62.000 60.000 6.96 0.00 35.26 5.73
371 374 0.106519 AAATTCCTCCATGGCTCCCG 60.107 55.000 6.96 0.00 35.26 5.14
372 375 2.165357 AAAATTCCTCCATGGCTCCC 57.835 50.000 6.96 0.00 35.26 4.30
439 473 8.940768 ACATACTTGTTTACTTGCACATTTTT 57.059 26.923 0.00 0.00 29.55 1.94
440 474 8.940768 AACATACTTGTTTACTTGCACATTTT 57.059 26.923 0.00 0.00 43.57 1.82
442 476 9.624697 CATAACATACTTGTTTACTTGCACATT 57.375 29.630 0.00 0.00 43.57 2.71
444 478 8.160521 ACATAACATACTTGTTTACTTGCACA 57.839 30.769 0.00 0.00 43.57 4.57
445 479 8.504005 AGACATAACATACTTGTTTACTTGCAC 58.496 33.333 0.00 0.00 43.57 4.57
474 508 9.618410 CGTTTTTCATTCTGAAATTTTACACAC 57.382 29.630 3.36 0.00 44.75 3.82
475 509 9.360093 ACGTTTTTCATTCTGAAATTTTACACA 57.640 25.926 3.36 0.00 44.75 3.72
485 519 9.958234 TCATATTTCAACGTTTTTCATTCTGAA 57.042 25.926 0.00 0.00 34.03 3.02
486 520 9.393249 GTCATATTTCAACGTTTTTCATTCTGA 57.607 29.630 0.00 0.00 0.00 3.27
487 521 8.357966 CGTCATATTTCAACGTTTTTCATTCTG 58.642 33.333 0.00 0.00 0.00 3.02
488 522 8.073768 ACGTCATATTTCAACGTTTTTCATTCT 58.926 29.630 0.00 0.00 46.56 2.40
489 523 8.147172 CACGTCATATTTCAACGTTTTTCATTC 58.853 33.333 0.00 0.00 46.56 2.67
490 524 7.646130 ACACGTCATATTTCAACGTTTTTCATT 59.354 29.630 0.00 0.00 46.56 2.57
491 525 7.136119 ACACGTCATATTTCAACGTTTTTCAT 58.864 30.769 0.00 0.00 46.56 2.57
492 526 6.487960 ACACGTCATATTTCAACGTTTTTCA 58.512 32.000 0.00 0.00 46.56 2.69
493 527 6.963017 ACACGTCATATTTCAACGTTTTTC 57.037 33.333 0.00 0.00 46.56 2.29
494 528 7.408123 TGTACACGTCATATTTCAACGTTTTT 58.592 30.769 0.00 0.00 46.56 1.94
495 529 6.946165 TGTACACGTCATATTTCAACGTTTT 58.054 32.000 0.00 0.00 46.56 2.43
496 530 6.528014 TGTACACGTCATATTTCAACGTTT 57.472 33.333 0.00 0.00 46.56 3.60
497 531 6.528014 TTGTACACGTCATATTTCAACGTT 57.472 33.333 0.00 0.00 46.56 3.99
499 533 7.794810 TCTTTTTGTACACGTCATATTTCAACG 59.205 33.333 0.00 0.00 41.93 4.10
500 534 8.889000 GTCTTTTTGTACACGTCATATTTCAAC 58.111 33.333 0.00 0.00 0.00 3.18
501 535 8.613482 TGTCTTTTTGTACACGTCATATTTCAA 58.387 29.630 0.00 0.00 0.00 2.69
502 536 8.144155 TGTCTTTTTGTACACGTCATATTTCA 57.856 30.769 0.00 0.00 0.00 2.69
503 537 8.996988 TTGTCTTTTTGTACACGTCATATTTC 57.003 30.769 0.00 0.00 0.00 2.17
504 538 9.959749 ATTTGTCTTTTTGTACACGTCATATTT 57.040 25.926 0.00 0.00 0.00 1.40
505 539 9.959749 AATTTGTCTTTTTGTACACGTCATATT 57.040 25.926 0.00 0.00 0.00 1.28
506 540 9.607285 GAATTTGTCTTTTTGTACACGTCATAT 57.393 29.630 0.00 0.00 0.00 1.78
507 541 8.613482 TGAATTTGTCTTTTTGTACACGTCATA 58.387 29.630 0.00 0.00 0.00 2.15
508 542 7.476667 TGAATTTGTCTTTTTGTACACGTCAT 58.523 30.769 0.00 0.00 0.00 3.06
509 543 6.843208 TGAATTTGTCTTTTTGTACACGTCA 58.157 32.000 0.00 0.00 0.00 4.35
510 544 7.642194 TCATGAATTTGTCTTTTTGTACACGTC 59.358 33.333 0.00 0.00 0.00 4.34
511 545 7.431084 GTCATGAATTTGTCTTTTTGTACACGT 59.569 33.333 0.00 0.00 0.00 4.49
512 546 7.096640 GGTCATGAATTTGTCTTTTTGTACACG 60.097 37.037 0.00 0.00 0.00 4.49
513 547 7.920682 AGGTCATGAATTTGTCTTTTTGTACAC 59.079 33.333 0.00 0.00 0.00 2.90
514 548 7.920151 CAGGTCATGAATTTGTCTTTTTGTACA 59.080 33.333 0.00 0.00 0.00 2.90
515 549 7.382218 CCAGGTCATGAATTTGTCTTTTTGTAC 59.618 37.037 0.00 0.00 0.00 2.90
516 550 7.432869 CCAGGTCATGAATTTGTCTTTTTGTA 58.567 34.615 0.00 0.00 0.00 2.41
517 551 6.282930 CCAGGTCATGAATTTGTCTTTTTGT 58.717 36.000 0.00 0.00 0.00 2.83
518 552 5.697633 CCCAGGTCATGAATTTGTCTTTTTG 59.302 40.000 0.00 0.00 0.00 2.44
519 553 5.221702 CCCCAGGTCATGAATTTGTCTTTTT 60.222 40.000 0.00 0.00 0.00 1.94
520 554 4.284234 CCCCAGGTCATGAATTTGTCTTTT 59.716 41.667 0.00 0.00 0.00 2.27
521 555 3.834231 CCCCAGGTCATGAATTTGTCTTT 59.166 43.478 0.00 0.00 0.00 2.52
522 556 3.434309 CCCCAGGTCATGAATTTGTCTT 58.566 45.455 0.00 0.00 0.00 3.01
523 557 2.291800 CCCCCAGGTCATGAATTTGTCT 60.292 50.000 0.00 0.00 0.00 3.41
524 558 2.102578 CCCCCAGGTCATGAATTTGTC 58.897 52.381 0.00 0.00 0.00 3.18
525 559 2.236489 CCCCCAGGTCATGAATTTGT 57.764 50.000 0.00 0.00 0.00 2.83
541 575 5.505181 ACACATGATACTATTCATCCCCC 57.495 43.478 0.00 0.00 34.09 5.40
542 576 8.918202 TTTAACACATGATACTATTCATCCCC 57.082 34.615 0.00 0.00 34.09 4.81
580 614 9.689976 CATATGTGTGTAAATTTTCAGGTCAAA 57.310 29.630 0.00 0.00 0.00 2.69
581 615 8.855110 ACATATGTGTGTAAATTTTCAGGTCAA 58.145 29.630 7.78 0.00 37.14 3.18
582 616 8.402798 ACATATGTGTGTAAATTTTCAGGTCA 57.597 30.769 7.78 0.00 37.14 4.02
652 686 8.997960 CGGTCTTGAAAATTTTGAATTTTGTTG 58.002 29.630 8.47 5.97 32.03 3.33
653 687 8.940952 TCGGTCTTGAAAATTTTGAATTTTGTT 58.059 25.926 8.47 0.00 32.03 2.83
654 688 8.485976 TCGGTCTTGAAAATTTTGAATTTTGT 57.514 26.923 8.47 0.00 32.03 2.83
655 689 7.583762 GCTCGGTCTTGAAAATTTTGAATTTTG 59.416 33.333 8.47 0.00 32.03 2.44
656 690 7.495606 AGCTCGGTCTTGAAAATTTTGAATTTT 59.504 29.630 8.47 10.24 34.30 1.82
657 691 6.986231 AGCTCGGTCTTGAAAATTTTGAATTT 59.014 30.769 8.47 0.00 0.00 1.82
658 692 6.515832 AGCTCGGTCTTGAAAATTTTGAATT 58.484 32.000 8.47 0.00 0.00 2.17
659 693 6.089249 AGCTCGGTCTTGAAAATTTTGAAT 57.911 33.333 8.47 0.00 0.00 2.57
660 694 5.507315 GGAGCTCGGTCTTGAAAATTTTGAA 60.507 40.000 8.47 5.32 0.00 2.69
661 695 4.023193 GGAGCTCGGTCTTGAAAATTTTGA 60.023 41.667 8.47 0.00 0.00 2.69
662 696 4.229876 GGAGCTCGGTCTTGAAAATTTTG 58.770 43.478 8.47 0.00 0.00 2.44
663 697 3.888930 TGGAGCTCGGTCTTGAAAATTTT 59.111 39.130 7.83 2.28 0.00 1.82
664 698 3.486383 TGGAGCTCGGTCTTGAAAATTT 58.514 40.909 7.83 0.00 0.00 1.82
665 699 3.140325 TGGAGCTCGGTCTTGAAAATT 57.860 42.857 7.83 0.00 0.00 1.82
666 700 2.859165 TGGAGCTCGGTCTTGAAAAT 57.141 45.000 7.83 0.00 0.00 1.82
667 701 2.426522 CATGGAGCTCGGTCTTGAAAA 58.573 47.619 7.83 0.00 0.00 2.29
668 702 1.339055 CCATGGAGCTCGGTCTTGAAA 60.339 52.381 5.56 0.00 0.00 2.69
669 703 0.250234 CCATGGAGCTCGGTCTTGAA 59.750 55.000 5.56 0.00 0.00 2.69
670 704 0.614697 TCCATGGAGCTCGGTCTTGA 60.615 55.000 11.44 0.00 0.00 3.02
671 705 0.179089 CTCCATGGAGCTCGGTCTTG 60.179 60.000 28.45 2.18 35.31 3.02
672 706 2.206635 CTCCATGGAGCTCGGTCTT 58.793 57.895 28.45 0.00 35.31 3.01
673 707 3.947173 CTCCATGGAGCTCGGTCT 58.053 61.111 28.45 0.00 35.31 3.85
681 715 3.160047 AGGCCGAGCTCCATGGAG 61.160 66.667 33.73 33.73 44.56 3.86
682 716 3.157252 GAGGCCGAGCTCCATGGA 61.157 66.667 15.27 15.27 0.00 3.41
683 717 4.247380 GGAGGCCGAGCTCCATGG 62.247 72.222 4.97 4.97 39.45 3.66
684 718 1.402896 TTAGGAGGCCGAGCTCCATG 61.403 60.000 8.47 0.00 41.98 3.66
685 719 1.075226 TTAGGAGGCCGAGCTCCAT 60.075 57.895 8.47 0.00 41.98 3.41
686 720 1.758514 CTTAGGAGGCCGAGCTCCA 60.759 63.158 8.47 0.00 41.98 3.86
687 721 1.455959 TCTTAGGAGGCCGAGCTCC 60.456 63.158 8.47 0.00 39.93 4.70
688 722 1.038130 TGTCTTAGGAGGCCGAGCTC 61.038 60.000 2.73 2.73 0.00 4.09
689 723 0.614979 TTGTCTTAGGAGGCCGAGCT 60.615 55.000 0.00 0.00 0.00 4.09
690 724 0.466124 ATTGTCTTAGGAGGCCGAGC 59.534 55.000 0.00 0.00 0.00 5.03
691 725 3.056465 GGATATTGTCTTAGGAGGCCGAG 60.056 52.174 0.00 0.00 0.00 4.63
692 726 2.897969 GGATATTGTCTTAGGAGGCCGA 59.102 50.000 0.00 0.00 0.00 5.54
693 727 2.352814 CGGATATTGTCTTAGGAGGCCG 60.353 54.545 0.00 0.00 0.00 6.13
694 728 2.028020 CCGGATATTGTCTTAGGAGGCC 60.028 54.545 0.00 0.00 0.00 5.19
695 729 2.613223 GCCGGATATTGTCTTAGGAGGC 60.613 54.545 5.05 0.00 0.00 4.70
696 730 2.900546 AGCCGGATATTGTCTTAGGAGG 59.099 50.000 5.05 0.00 0.00 4.30
697 731 4.310769 CAAGCCGGATATTGTCTTAGGAG 58.689 47.826 5.05 0.00 0.00 3.69
698 732 3.494398 GCAAGCCGGATATTGTCTTAGGA 60.494 47.826 5.05 0.00 0.00 2.94
699 733 2.808543 GCAAGCCGGATATTGTCTTAGG 59.191 50.000 5.05 0.00 0.00 2.69
700 734 2.476619 CGCAAGCCGGATATTGTCTTAG 59.523 50.000 5.05 0.00 0.00 2.18
701 735 2.479837 CGCAAGCCGGATATTGTCTTA 58.520 47.619 5.05 0.00 0.00 2.10
702 736 1.299541 CGCAAGCCGGATATTGTCTT 58.700 50.000 5.05 0.00 0.00 3.01
703 737 2.992089 CGCAAGCCGGATATTGTCT 58.008 52.632 5.05 0.00 0.00 3.41
713 747 0.535102 ATAAAGGATCCCGCAAGCCG 60.535 55.000 8.55 0.00 0.00 5.52
714 748 2.224548 ACTATAAAGGATCCCGCAAGCC 60.225 50.000 8.55 0.00 0.00 4.35
715 749 3.127425 ACTATAAAGGATCCCGCAAGC 57.873 47.619 8.55 0.00 0.00 4.01
716 750 5.470047 AGTACTATAAAGGATCCCGCAAG 57.530 43.478 8.55 2.65 0.00 4.01
717 751 5.881923 AAGTACTATAAAGGATCCCGCAA 57.118 39.130 8.55 0.00 0.00 4.85
718 752 7.549147 AATAAGTACTATAAAGGATCCCGCA 57.451 36.000 8.55 0.00 0.00 5.69
719 753 9.363763 GTAAATAAGTACTATAAAGGATCCCGC 57.636 37.037 8.55 0.00 0.00 6.13
763 797 0.035458 AGGGGAAAGTCAGTTCGCAG 59.965 55.000 4.67 0.00 41.07 5.18
886 922 6.259387 CCCGACCTGTCTTGGTTATATAAAAC 59.741 42.308 0.00 0.00 41.00 2.43
1266 1303 4.500116 GTGGGGCGCGAGAGAGAC 62.500 72.222 12.10 0.00 38.69 3.36
1351 1389 1.234821 TGAGACAAAACCGACCATGC 58.765 50.000 0.00 0.00 0.00 4.06
1364 1402 3.462483 TTACGAACCAAGCTTGAGACA 57.538 42.857 28.05 4.79 0.00 3.41
1389 1427 3.066900 ACAGAGATAACGAACGGATCAGG 59.933 47.826 0.00 0.00 0.00 3.86
1510 1560 2.842394 CTTGTCTGCAGATCGCCGGT 62.842 60.000 21.47 0.00 41.33 5.28
1561 1611 1.299620 GCTGTTGTGGCAGTGCTTG 60.300 57.895 16.11 0.00 38.65 4.01
1568 1618 0.395586 ACCTTCTTGCTGTTGTGGCA 60.396 50.000 0.00 0.00 37.97 4.92
1657 1707 7.334421 CCTCCGAAAAACAGATTTCATCTAAGA 59.666 37.037 0.00 0.00 38.87 2.10
1678 1728 2.360350 ATGCAACACTGGCCTCCG 60.360 61.111 3.32 0.00 0.00 4.63
1750 1800 1.545582 CCTGCACGAATTTCCACCATT 59.454 47.619 0.00 0.00 0.00 3.16
1764 1814 2.094762 ATTAGAACACCGACCTGCAC 57.905 50.000 0.00 0.00 0.00 4.57
1784 1834 2.045561 TCGTTTCACCTGCTTTTCCA 57.954 45.000 0.00 0.00 0.00 3.53
1793 1843 3.403038 CAGGTTTCTGATCGTTTCACCT 58.597 45.455 0.00 0.00 43.49 4.00
1802 1852 3.442977 AGCTCATTTGCAGGTTTCTGATC 59.557 43.478 0.00 0.00 43.49 2.92
1862 1912 0.460987 GAGTCGTGGCATCTGAAGGG 60.461 60.000 0.00 0.00 0.00 3.95
1982 2032 2.417787 CGGAGGGAGTACTAAAAACCCG 60.418 54.545 10.20 8.25 44.57 5.28
1989 2039 2.905415 TGGAACGGAGGGAGTACTAA 57.095 50.000 0.00 0.00 0.00 2.24
1990 2040 2.905415 TTGGAACGGAGGGAGTACTA 57.095 50.000 0.00 0.00 0.00 1.82
1991 2041 2.019807 TTTGGAACGGAGGGAGTACT 57.980 50.000 0.00 0.00 0.00 2.73
1992 2042 3.345508 AATTTGGAACGGAGGGAGTAC 57.654 47.619 0.00 0.00 0.00 2.73
1993 2043 4.098894 AGTAATTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
1994 2044 2.910977 AGTAATTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
1995 2045 3.629142 AGTAATTTGGAACGGAGGGAG 57.371 47.619 0.00 0.00 0.00 4.30
1996 2046 3.328343 TCAAGTAATTTGGAACGGAGGGA 59.672 43.478 0.00 0.00 37.39 4.20
1997 2047 3.439129 GTCAAGTAATTTGGAACGGAGGG 59.561 47.826 0.00 0.00 37.39 4.30
1998 2048 3.439129 GGTCAAGTAATTTGGAACGGAGG 59.561 47.826 0.00 0.00 37.39 4.30
1999 2049 3.439129 GGGTCAAGTAATTTGGAACGGAG 59.561 47.826 0.00 0.00 37.39 4.63
2000 2050 3.181442 TGGGTCAAGTAATTTGGAACGGA 60.181 43.478 0.00 0.00 37.39 4.69
2001 2051 3.150767 TGGGTCAAGTAATTTGGAACGG 58.849 45.455 0.00 0.00 37.39 4.44
2002 2052 6.693315 ATATGGGTCAAGTAATTTGGAACG 57.307 37.500 0.00 0.00 37.39 3.95
2012 2062 8.573885 CGTGTCTAGATAAATATGGGTCAAGTA 58.426 37.037 0.00 0.00 0.00 2.24
2013 2063 7.434492 CGTGTCTAGATAAATATGGGTCAAGT 58.566 38.462 0.00 0.00 0.00 3.16
2014 2064 6.868864 CCGTGTCTAGATAAATATGGGTCAAG 59.131 42.308 0.00 0.00 0.00 3.02
2015 2065 6.551975 TCCGTGTCTAGATAAATATGGGTCAA 59.448 38.462 0.00 0.00 0.00 3.18
2016 2066 6.072649 TCCGTGTCTAGATAAATATGGGTCA 58.927 40.000 0.00 0.00 0.00 4.02
2017 2067 6.585695 TCCGTGTCTAGATAAATATGGGTC 57.414 41.667 0.00 0.00 0.00 4.46
2018 2068 6.497259 ACATCCGTGTCTAGATAAATATGGGT 59.503 38.462 0.00 0.00 31.41 4.51
2019 2069 6.936279 ACATCCGTGTCTAGATAAATATGGG 58.064 40.000 0.00 0.00 31.41 4.00
2020 2070 9.737427 GATACATCCGTGTCTAGATAAATATGG 57.263 37.037 0.00 0.00 39.77 2.74
2031 2081 5.926663 AGTGTCTAGATACATCCGTGTCTA 58.073 41.667 20.24 0.00 41.37 2.59
2032 2082 4.783055 AGTGTCTAGATACATCCGTGTCT 58.217 43.478 20.24 0.00 44.80 3.41
2033 2083 6.615264 TTAGTGTCTAGATACATCCGTGTC 57.385 41.667 20.24 0.00 39.77 3.67
2034 2084 6.376299 TGTTTAGTGTCTAGATACATCCGTGT 59.624 38.462 20.24 2.04 42.39 4.49
2035 2085 6.792326 TGTTTAGTGTCTAGATACATCCGTG 58.208 40.000 20.24 0.00 0.00 4.94
2036 2086 7.122353 ACTTGTTTAGTGTCTAGATACATCCGT 59.878 37.037 20.24 3.37 35.19 4.69
2037 2087 7.481642 ACTTGTTTAGTGTCTAGATACATCCG 58.518 38.462 20.24 5.79 35.19 4.18
2049 2099 9.395707 CGGATGTATCTATACTTGTTTAGTGTC 57.604 37.037 2.07 0.00 37.73 3.67
2050 2100 8.910944 ACGGATGTATCTATACTTGTTTAGTGT 58.089 33.333 2.07 0.00 37.73 3.55
2085 2135 9.471084 CCGTTCCAAATTAGTTGACTTAAATTT 57.529 29.630 0.00 0.00 39.87 1.82
2086 2136 8.852135 TCCGTTCCAAATTAGTTGACTTAAATT 58.148 29.630 0.00 0.00 39.87 1.82
2087 2137 8.398878 TCCGTTCCAAATTAGTTGACTTAAAT 57.601 30.769 0.00 0.00 39.87 1.40
2088 2138 7.040961 CCTCCGTTCCAAATTAGTTGACTTAAA 60.041 37.037 0.00 0.00 39.87 1.52
2089 2139 6.428771 CCTCCGTTCCAAATTAGTTGACTTAA 59.571 38.462 0.00 0.00 39.87 1.85
2090 2140 5.935789 CCTCCGTTCCAAATTAGTTGACTTA 59.064 40.000 0.00 0.00 39.87 2.24
2091 2141 4.760204 CCTCCGTTCCAAATTAGTTGACTT 59.240 41.667 0.00 0.00 39.87 3.01
2092 2142 4.324267 CCTCCGTTCCAAATTAGTTGACT 58.676 43.478 0.00 0.00 39.87 3.41
2093 2143 3.439129 CCCTCCGTTCCAAATTAGTTGAC 59.561 47.826 0.00 0.00 39.87 3.18
2094 2144 3.328343 TCCCTCCGTTCCAAATTAGTTGA 59.672 43.478 0.00 0.00 39.87 3.18
2095 2145 3.681593 TCCCTCCGTTCCAAATTAGTTG 58.318 45.455 0.00 0.00 36.94 3.16
2096 2146 3.329814 ACTCCCTCCGTTCCAAATTAGTT 59.670 43.478 0.00 0.00 0.00 2.24
2097 2147 2.910977 ACTCCCTCCGTTCCAAATTAGT 59.089 45.455 0.00 0.00 0.00 2.24
2098 2148 3.629142 ACTCCCTCCGTTCCAAATTAG 57.371 47.619 0.00 0.00 0.00 1.73
2099 2149 4.098894 ACTACTCCCTCCGTTCCAAATTA 58.901 43.478 0.00 0.00 0.00 1.40
2100 2150 2.910977 ACTACTCCCTCCGTTCCAAATT 59.089 45.455 0.00 0.00 0.00 1.82
2101 2151 2.547990 ACTACTCCCTCCGTTCCAAAT 58.452 47.619 0.00 0.00 0.00 2.32
2102 2152 2.019807 ACTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
2103 2153 1.897802 GAACTACTCCCTCCGTTCCAA 59.102 52.381 0.00 0.00 31.89 3.53
2104 2154 1.203087 TGAACTACTCCCTCCGTTCCA 60.203 52.381 0.00 0.00 35.97 3.53
2105 2155 1.204231 GTGAACTACTCCCTCCGTTCC 59.796 57.143 0.00 0.00 35.97 3.62
2106 2156 1.135460 CGTGAACTACTCCCTCCGTTC 60.135 57.143 0.00 0.00 37.02 3.95
2107 2157 0.886563 CGTGAACTACTCCCTCCGTT 59.113 55.000 0.00 0.00 0.00 4.44
2108 2158 0.251077 ACGTGAACTACTCCCTCCGT 60.251 55.000 0.00 0.00 0.00 4.69
2109 2159 0.886563 AACGTGAACTACTCCCTCCG 59.113 55.000 0.00 0.00 0.00 4.63
2110 2160 2.685100 CAAACGTGAACTACTCCCTCC 58.315 52.381 0.00 0.00 0.00 4.30
2111 2161 2.067013 GCAAACGTGAACTACTCCCTC 58.933 52.381 0.00 0.00 0.00 4.30
2112 2162 1.692519 AGCAAACGTGAACTACTCCCT 59.307 47.619 0.00 0.00 0.00 4.20
2113 2163 1.798813 CAGCAAACGTGAACTACTCCC 59.201 52.381 0.00 0.00 0.00 4.30
2114 2164 2.750948 TCAGCAAACGTGAACTACTCC 58.249 47.619 0.00 0.00 0.00 3.85
2115 2165 4.116713 GTTCAGCAAACGTGAACTACTC 57.883 45.455 8.17 0.00 46.88 2.59
2155 2205 5.130975 TGCATTGGAAAGAGCCTTAGAGATA 59.869 40.000 0.00 0.00 30.72 1.98
2299 2349 6.183360 ACAAAACAGTTGGATTCATCACCAAT 60.183 34.615 0.00 0.00 45.81 3.16
2884 3006 5.048713 AGCTAAAAGCAGTTGTACCAATCAC 60.049 40.000 1.22 0.00 45.56 3.06
2931 3054 8.498054 AGCATAGCACCATGAATAACATATAC 57.502 34.615 0.00 0.00 37.46 1.47
3057 3182 2.158325 TGGGAAACTCCTTTCAGGCAAT 60.158 45.455 0.00 0.00 38.04 3.56
3280 3469 8.463930 TTTTCGGATTGCTATTTAATCAGGAT 57.536 30.769 0.00 0.00 36.50 3.24
3505 3694 1.737793 CTACAACCCAATCAAGCCGAC 59.262 52.381 0.00 0.00 0.00 4.79
3576 3773 4.467438 AGGGCAAAATTTGGTGGAGAATAG 59.533 41.667 7.89 0.00 0.00 1.73
3623 3820 9.233232 GCTTGAAAAACGTTCTTATATTATGGG 57.767 33.333 0.00 0.00 0.00 4.00
3657 3854 9.233232 CCCATAATATAAGAACGTTTTTGAAGC 57.767 33.333 13.87 0.00 0.00 3.86
3660 3857 8.605746 CGTCCCATAATATAAGAACGTTTTTGA 58.394 33.333 13.87 2.81 0.00 2.69
3661 3858 7.853929 CCGTCCCATAATATAAGAACGTTTTTG 59.146 37.037 13.87 0.00 0.00 2.44
3662 3859 7.769970 TCCGTCCCATAATATAAGAACGTTTTT 59.230 33.333 9.22 9.22 0.00 1.94
3663 3860 7.274447 TCCGTCCCATAATATAAGAACGTTTT 58.726 34.615 0.46 0.00 0.00 2.43
3664 3861 6.819284 TCCGTCCCATAATATAAGAACGTTT 58.181 36.000 0.46 0.00 0.00 3.60
3665 3862 6.409524 TCCGTCCCATAATATAAGAACGTT 57.590 37.500 0.00 0.00 0.00 3.99
3666 3863 5.047519 CCTCCGTCCCATAATATAAGAACGT 60.048 44.000 0.00 0.00 0.00 3.99
3667 3864 5.408356 CCTCCGTCCCATAATATAAGAACG 58.592 45.833 0.00 0.00 0.00 3.95
3668 3865 5.482878 TCCCTCCGTCCCATAATATAAGAAC 59.517 44.000 0.00 0.00 0.00 3.01
3669 3866 5.657446 TCCCTCCGTCCCATAATATAAGAA 58.343 41.667 0.00 0.00 0.00 2.52
3670 3867 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
3671 3868 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
3672 3869 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
3673 3870 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
3674 3871 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
3675 3872 4.202749 ACATACTCCCTCCGTCCCATAATA 60.203 45.833 0.00 0.00 0.00 0.98
3676 3873 3.173965 CATACTCCCTCCGTCCCATAAT 58.826 50.000 0.00 0.00 0.00 1.28
3677 3874 2.090943 ACATACTCCCTCCGTCCCATAA 60.091 50.000 0.00 0.00 0.00 1.90
3678 3875 1.502039 ACATACTCCCTCCGTCCCATA 59.498 52.381 0.00 0.00 0.00 2.74
3679 3876 0.264955 ACATACTCCCTCCGTCCCAT 59.735 55.000 0.00 0.00 0.00 4.00
3680 3877 0.928505 TACATACTCCCTCCGTCCCA 59.071 55.000 0.00 0.00 0.00 4.37
3681 3878 2.305858 ATACATACTCCCTCCGTCCC 57.694 55.000 0.00 0.00 0.00 4.46
3682 3879 4.377897 CAAAATACATACTCCCTCCGTCC 58.622 47.826 0.00 0.00 0.00 4.79
3683 3880 3.808174 GCAAAATACATACTCCCTCCGTC 59.192 47.826 0.00 0.00 0.00 4.79
3684 3881 3.433173 GGCAAAATACATACTCCCTCCGT 60.433 47.826 0.00 0.00 0.00 4.69
3685 3882 3.139077 GGCAAAATACATACTCCCTCCG 58.861 50.000 0.00 0.00 0.00 4.63
3686 3883 3.138468 AGGGCAAAATACATACTCCCTCC 59.862 47.826 0.00 0.00 38.13 4.30
3687 3884 4.137543 CAGGGCAAAATACATACTCCCTC 58.862 47.826 0.00 0.00 40.42 4.30
3688 3885 3.785887 TCAGGGCAAAATACATACTCCCT 59.214 43.478 0.00 0.00 42.97 4.20
3689 3886 4.164843 TCAGGGCAAAATACATACTCCC 57.835 45.455 0.00 0.00 0.00 4.30
3690 3887 6.715347 ATTTCAGGGCAAAATACATACTCC 57.285 37.500 0.00 0.00 0.00 3.85
3822 4020 2.729360 TCTAAATAATCGATGCCGCACG 59.271 45.455 0.00 1.90 35.37 5.34
3887 4095 7.093945 GCTTTCCTAGGTCCAAAATACAAATCA 60.094 37.037 9.08 0.00 0.00 2.57
3889 4097 6.954102 AGCTTTCCTAGGTCCAAAATACAAAT 59.046 34.615 9.08 0.00 0.00 2.32
3993 4205 1.741706 CATGTGTAAAGCCAGAGCCAG 59.258 52.381 0.00 0.00 41.25 4.85
4251 4463 6.443792 CCAACTACAAAAACCATACAAGGTC 58.556 40.000 0.00 0.00 42.25 3.85
4305 4517 4.163078 TGCAGAATTGGTTTTTCTTTCCCA 59.837 37.500 0.00 0.00 31.11 4.37
4306 4518 4.702831 TGCAGAATTGGTTTTTCTTTCCC 58.297 39.130 0.00 0.00 31.11 3.97
4713 4926 8.141909 AGACGCTAGTATTAGAATGCAAATACA 58.858 33.333 17.17 6.45 39.81 2.29
4735 4948 0.741326 ACCGTCCATGAGATGAGACG 59.259 55.000 11.50 11.50 45.21 4.18
4779 5034 6.824305 ATGTGGACATCTAAAGTGAAAAGG 57.176 37.500 0.00 0.00 28.78 3.11
4917 5400 9.784531 ATAAGATGTAACAACATCATAGAAGGG 57.215 33.333 17.99 0.00 46.52 3.95
4960 5445 2.097466 AGAAAAGTAAATGGCGATGGCG 59.903 45.455 0.00 0.00 41.24 5.69
4961 5446 3.782889 AGAAAAGTAAATGGCGATGGC 57.217 42.857 0.00 0.00 38.90 4.40
4962 5447 5.059404 ACAAGAAAAGTAAATGGCGATGG 57.941 39.130 0.00 0.00 0.00 3.51
4963 5448 6.128849 CCAAACAAGAAAAGTAAATGGCGATG 60.129 38.462 0.00 0.00 0.00 3.84
4964 5449 5.925969 CCAAACAAGAAAAGTAAATGGCGAT 59.074 36.000 0.00 0.00 0.00 4.58
4965 5450 5.163499 ACCAAACAAGAAAAGTAAATGGCGA 60.163 36.000 0.00 0.00 0.00 5.54
4966 5451 5.047188 ACCAAACAAGAAAAGTAAATGGCG 58.953 37.500 0.00 0.00 0.00 5.69
5204 5689 2.377810 CCAGCCCATGCCACCTCTA 61.378 63.158 0.00 0.00 38.69 2.43
5291 5776 1.544724 TTGGTGGCTGGCTTTCATAC 58.455 50.000 2.00 0.00 0.00 2.39
5326 5811 4.100498 GGCCATAGCTGTTGTAGTTACCTA 59.900 45.833 0.00 0.00 39.73 3.08
5789 6280 3.264897 CCGTATGCTGGCTGCGAC 61.265 66.667 11.85 10.84 46.63 5.19
6168 6664 3.996363 CCCAAAGATTTAAAACAGCAGGC 59.004 43.478 0.00 0.00 0.00 4.85
6396 6955 4.214332 GGTCAGGACACATTCTCAAAGAAC 59.786 45.833 1.41 0.00 37.00 3.01
6418 6977 1.329913 GGGCTTGGGGCTTACAATGG 61.330 60.000 0.00 0.00 41.46 3.16
6420 6979 0.339510 ATGGGCTTGGGGCTTACAAT 59.660 50.000 0.00 0.00 41.46 2.71
6423 6982 0.033109 AGAATGGGCTTGGGGCTTAC 60.033 55.000 0.00 0.00 41.46 2.34
6426 6985 2.361771 CAGAATGGGCTTGGGGCT 59.638 61.111 0.00 0.00 41.46 5.19
6482 7041 4.911390 AGGGAGTACATCTTGGTGAAAAG 58.089 43.478 0.00 0.00 0.00 2.27
6551 7140 8.487176 CGTCCCAAAATTTTTGTCTTAGATTTG 58.513 33.333 18.05 2.04 0.00 2.32
6565 7211 1.708551 TCTCCCTCCGTCCCAAAATTT 59.291 47.619 0.00 0.00 0.00 1.82
6664 7315 2.559668 CACTGGCAAACATGACCTCATT 59.440 45.455 0.00 0.00 33.61 2.57
6678 7329 2.165641 CCTATCTACAACGACACTGGCA 59.834 50.000 0.00 0.00 0.00 4.92
6826 7759 0.620030 TGGGGCGCTGCATATCATAT 59.380 50.000 7.64 0.00 0.00 1.78
7024 8168 5.565592 TGTTCATGTTTCATAGGTCATGC 57.434 39.130 0.00 0.00 37.95 4.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.