Multiple sequence alignment - TraesCS7D01G313900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G313900 chr7D 100.000 8358 0 0 1 8358 397988773 397997130 0.000000e+00 15435.0
1 TraesCS7D01G313900 chr7D 96.624 237 8 0 1 237 156207752 156207988 2.190000e-105 394.0
2 TraesCS7D01G313900 chr7D 95.690 232 10 0 1 232 509696745 509696976 2.850000e-99 374.0
3 TraesCS7D01G313900 chr7D 97.727 44 0 1 3330 3373 545221998 545222040 3.240000e-09 75.0
4 TraesCS7D01G313900 chr7D 91.489 47 3 1 4603 4648 461952467 461952513 7.000000e-06 63.9
5 TraesCS7D01G313900 chr7D 92.683 41 3 0 4603 4643 127000332 127000372 9.060000e-05 60.2
6 TraesCS7D01G313900 chr7D 100.000 30 0 0 6413 6442 125836551 125836522 1.000000e-03 56.5
7 TraesCS7D01G313900 chr7B 95.952 3360 89 19 4612 7959 402811505 402814829 0.000000e+00 5408.0
8 TraesCS7D01G313900 chr7B 94.332 3052 121 25 237 3264 402807120 402810143 0.000000e+00 4630.0
9 TraesCS7D01G313900 chr7B 94.000 900 37 3 3334 4218 402810183 402811080 0.000000e+00 1347.0
10 TraesCS7D01G313900 chr7B 85.145 653 59 13 3964 4612 145377013 145376395 1.180000e-177 634.0
11 TraesCS7D01G313900 chr7B 95.890 365 13 2 4263 4627 402811081 402811443 2.600000e-164 590.0
12 TraesCS7D01G313900 chr7B 91.979 187 9 6 8153 8335 402814952 402815136 2.990000e-64 257.0
13 TraesCS7D01G313900 chr7B 78.378 111 15 1 3791 3901 119202148 119202047 7.000000e-06 63.9
14 TraesCS7D01G313900 chr7B 100.000 31 0 0 8320 8350 402815153 402815183 3.260000e-04 58.4
15 TraesCS7D01G313900 chr7A 97.591 1785 38 4 4612 6394 454050957 454052738 0.000000e+00 3053.0
16 TraesCS7D01G313900 chr7A 95.543 1907 53 14 910 2807 454047076 454048959 0.000000e+00 3022.0
17 TraesCS7D01G313900 chr7A 95.932 1352 38 7 6435 7782 454053139 454054477 0.000000e+00 2176.0
18 TraesCS7D01G313900 chr7A 95.571 700 17 6 3932 4620 454050193 454050889 0.000000e+00 1109.0
19 TraesCS7D01G313900 chr7A 96.610 531 11 3 2806 3334 454049083 454049608 0.000000e+00 874.0
20 TraesCS7D01G313900 chr7A 91.587 630 18 9 251 853 454046047 454046668 0.000000e+00 837.0
21 TraesCS7D01G313900 chr7A 92.276 479 17 5 3334 3794 454049714 454050190 0.000000e+00 662.0
22 TraesCS7D01G313900 chr7A 90.909 187 11 6 8153 8335 454054736 454054920 6.480000e-61 246.0
23 TraesCS7D01G313900 chr7A 92.754 138 10 0 7822 7959 454054476 454054613 5.120000e-47 200.0
24 TraesCS7D01G313900 chr7A 95.349 43 1 1 3330 3372 625617696 625617737 5.410000e-07 67.6
25 TraesCS7D01G313900 chr7A 97.368 38 1 0 8320 8357 454054937 454054974 1.950000e-06 65.8
26 TraesCS7D01G313900 chr7A 92.683 41 3 0 4603 4643 127774266 127774306 9.060000e-05 60.2
27 TraesCS7D01G313900 chr5D 90.073 413 21 5 1850 2262 536870275 536869883 1.240000e-142 518.0
28 TraesCS7D01G313900 chr5D 94.215 242 13 1 1 242 480474897 480475137 1.330000e-97 368.0
29 TraesCS7D01G313900 chr5D 92.216 167 9 3 2717 2881 396691914 396691750 5.040000e-57 233.0
30 TraesCS7D01G313900 chr5D 87.121 132 13 2 6465 6596 105020956 105021083 6.760000e-31 147.0
31 TraesCS7D01G313900 chr4A 88.702 416 27 5 1847 2262 633131003 633131398 2.710000e-134 490.0
32 TraesCS7D01G313900 chr4A 91.404 349 25 3 1850 2198 633203860 633204203 2.730000e-129 473.0
33 TraesCS7D01G313900 chr4A 90.909 352 26 3 1847 2198 633174396 633174741 1.270000e-127 468.0
34 TraesCS7D01G313900 chr4A 90.341 352 21 8 1847 2198 633078664 633079002 4.600000e-122 449.0
35 TraesCS7D01G313900 chr2D 95.417 240 11 0 1 240 533884189 533883950 4.730000e-102 383.0
36 TraesCS7D01G313900 chr2D 95.359 237 11 0 1 237 6106674 6106438 2.200000e-100 377.0
37 TraesCS7D01G313900 chr2D 87.023 131 11 2 6465 6595 335121046 335120922 8.740000e-30 143.0
38 TraesCS7D01G313900 chr2D 92.308 52 2 2 3330 3380 445393508 445393458 1.160000e-08 73.1
39 TraesCS7D01G313900 chr3D 94.979 239 12 0 1 239 313910288 313910526 7.920000e-100 375.0
40 TraesCS7D01G313900 chr3D 94.937 237 12 0 1 237 13436765 13436529 1.020000e-98 372.0
41 TraesCS7D01G313900 chr3D 94.937 237 12 0 1 237 456103649 456103413 1.020000e-98 372.0
42 TraesCS7D01G313900 chr3D 92.683 164 10 2 2717 2878 598889731 598889894 1.400000e-57 235.0
43 TraesCS7D01G313900 chr3D 86.014 143 8 9 6465 6602 383544161 383544026 8.740000e-30 143.0
44 TraesCS7D01G313900 chr3D 94.737 38 1 1 6405 6442 123898825 123898861 3.260000e-04 58.4
45 TraesCS7D01G313900 chr4D 94.538 238 13 0 1 238 14974305 14974068 1.330000e-97 368.0
46 TraesCS7D01G313900 chr3A 94.737 152 7 1 2718 2869 726768968 726769118 1.400000e-57 235.0
47 TraesCS7D01G313900 chr5A 94.118 153 9 0 2717 2869 320214243 320214395 5.040000e-57 233.0
48 TraesCS7D01G313900 chr5A 91.617 167 10 3 2717 2881 502300030 502299866 2.350000e-55 228.0
49 TraesCS7D01G313900 chr2B 91.617 167 12 2 2718 2882 76912138 76912304 6.530000e-56 230.0
50 TraesCS7D01G313900 chr2B 83.088 136 21 2 3796 3930 548162217 548162351 1.140000e-23 122.0
51 TraesCS7D01G313900 chr2A 97.037 135 4 0 3796 3930 554533984 554534118 2.350000e-55 228.0
52 TraesCS7D01G313900 chr2A 87.023 131 11 2 6465 6595 445715002 445714878 8.740000e-30 143.0
53 TraesCS7D01G313900 chr2A 95.556 45 1 1 3334 3378 67518959 67519002 4.190000e-08 71.3
54 TraesCS7D01G313900 chr2A 90.698 43 4 0 6418 6460 16294758 16294716 3.260000e-04 58.4
55 TraesCS7D01G313900 chr2A 100.000 28 0 0 6415 6442 30873387 30873414 1.500000e-02 52.8
56 TraesCS7D01G313900 chr1B 91.566 166 12 2 2717 2880 521219539 521219374 2.350000e-55 228.0
57 TraesCS7D01G313900 chr1B 82.963 135 23 0 3796 3930 450851007 450851141 1.140000e-23 122.0
58 TraesCS7D01G313900 chr1B 78.689 183 33 5 6454 6635 623732123 623731946 5.300000e-22 117.0
59 TraesCS7D01G313900 chr1B 74.336 226 38 14 4478 4693 489202814 489203029 2.500000e-10 78.7
60 TraesCS7D01G313900 chr1B 97.436 39 1 0 3333 3371 406340844 406340806 5.410000e-07 67.6
61 TraesCS7D01G313900 chr6D 87.023 131 14 2 6464 6594 7565200 7565327 2.430000e-30 145.0
62 TraesCS7D01G313900 chr4B 82.353 136 24 0 3796 3931 65717979 65718114 1.470000e-22 119.0
63 TraesCS7D01G313900 chr4B 89.655 58 6 0 3873 3930 89407565 89407508 3.240000e-09 75.0
64 TraesCS7D01G313900 chr3B 76.824 233 41 12 6417 6645 630367959 630367736 1.470000e-22 119.0
65 TraesCS7D01G313900 chr1D 92.000 50 2 2 3333 3382 301232602 301232555 1.510000e-07 69.4
66 TraesCS7D01G313900 chr1D 92.308 39 3 0 6414 6452 44639072 44639034 1.000000e-03 56.5
67 TraesCS7D01G313900 chr1A 92.000 50 2 2 3333 3382 376137971 376137924 1.510000e-07 69.4
68 TraesCS7D01G313900 chr6A 97.222 36 1 0 6411 6446 429394851 429394886 2.520000e-05 62.1
69 TraesCS7D01G313900 chr6A 94.737 38 1 1 6405 6442 185134833 185134797 3.260000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G313900 chr7D 397988773 397997130 8357 False 15435.00 15435 100.000000 1 8358 1 chr7D.!!$F3 8357
1 TraesCS7D01G313900 chr7B 402807120 402815183 8063 False 2048.40 5408 95.358833 237 8350 6 chr7B.!!$F1 8113
2 TraesCS7D01G313900 chr7B 145376395 145377013 618 True 634.00 634 85.145000 3964 4612 1 chr7B.!!$R2 648
3 TraesCS7D01G313900 chr7A 454046047 454054974 8927 False 1224.48 3053 94.614100 251 8357 10 chr7A.!!$F3 8106

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
90 91 0.179150 CTGAGAGCTAGACGCCACAC 60.179 60.000 0.00 0.00 40.39 3.82 F
242 243 0.312416 TTGTCAAATTTGCCGGACGG 59.688 50.000 13.54 6.35 38.57 4.79 F
1361 1744 0.509499 TTTTCGATCGCGTGGTGTTC 59.491 50.000 11.09 0.00 38.98 3.18 F
1393 1780 0.892755 TCTGTTTCTATCGCCGGTGT 59.107 50.000 16.01 5.10 0.00 4.16 F
2269 2662 1.629043 TTGAGTAGGCAGTCGTTCCT 58.371 50.000 0.00 0.00 36.51 3.36 F
3760 4409 0.035458 CTGCTCCACGAAGACCCTTT 59.965 55.000 0.00 0.00 0.00 3.11 F
3843 4492 2.277084 CCGCGGAACTAGCAAAATAGT 58.723 47.619 24.07 0.00 37.61 2.12 F
5217 5958 1.966451 GAAGGTTGTGGACTGCCGG 60.966 63.158 0.00 0.00 36.79 6.13 F
6105 6847 0.465705 ATGAACATCCATCGCCTCGT 59.534 50.000 0.00 0.00 0.00 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1749 2142 1.867233 CAGAAGTCACACAACCCGAAG 59.133 52.381 0.00 0.00 0.00 3.79 R
2211 2604 2.684881 ACGAAAGCAGGGCTCATTAATG 59.315 45.455 9.29 9.29 38.25 1.90 R
2308 2701 0.802494 GGCCCATAACGAACACACTG 59.198 55.000 0.00 0.00 0.00 3.66 R
3357 3989 1.340795 ACAACGTACTCCCTCCGATCT 60.341 52.381 0.00 0.00 0.00 2.75 R
4208 4858 0.179150 GCAAACGCAACACAGTTGGA 60.179 50.000 11.39 0.00 0.00 3.53 R
4600 5264 2.052782 AAGACGTTTTTGTGGGCTCT 57.947 45.000 0.00 0.00 0.00 4.09 R
5529 6270 2.159517 GCACTTTTTAGACATCAGGCGG 60.160 50.000 0.00 0.00 0.00 6.13 R
6227 6969 0.183014 TGGCGTTAGTGGTTTGGGAA 59.817 50.000 0.00 0.00 0.00 3.97 R
8031 9204 0.040781 CCGATCCAAACAAAACGCGT 60.041 50.000 5.58 5.58 0.00 6.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.806591 TCACAGTTAGGCGCTACAC 57.193 52.632 7.64 0.76 0.00 2.90
20 21 1.076533 CACAGTTAGGCGCTACACGG 61.077 60.000 7.64 4.68 43.93 4.94
38 39 4.969196 CCAGCGTCGCACCTGTGT 62.969 66.667 21.09 0.00 0.00 3.72
39 40 3.705638 CAGCGTCGCACCTGTGTG 61.706 66.667 21.09 2.74 45.65 3.82
40 41 3.911698 AGCGTCGCACCTGTGTGA 61.912 61.111 21.09 9.34 45.76 3.58
44 45 2.261361 TCGCACCTGTGTGATCCG 59.739 61.111 9.34 0.00 45.76 4.18
45 46 2.261361 CGCACCTGTGTGATCCGA 59.739 61.111 4.88 0.00 45.76 4.55
46 47 1.374125 CGCACCTGTGTGATCCGAA 60.374 57.895 4.88 0.00 45.76 4.30
47 48 0.948623 CGCACCTGTGTGATCCGAAA 60.949 55.000 4.88 0.00 45.76 3.46
48 49 1.234821 GCACCTGTGTGATCCGAAAA 58.765 50.000 0.00 0.00 45.76 2.29
49 50 1.812571 GCACCTGTGTGATCCGAAAAT 59.187 47.619 0.00 0.00 45.76 1.82
50 51 2.228822 GCACCTGTGTGATCCGAAAATT 59.771 45.455 0.00 0.00 45.76 1.82
51 52 3.438781 GCACCTGTGTGATCCGAAAATTA 59.561 43.478 0.00 0.00 45.76 1.40
52 53 4.671766 GCACCTGTGTGATCCGAAAATTAC 60.672 45.833 0.00 0.00 45.76 1.89
53 54 4.695455 CACCTGTGTGATCCGAAAATTACT 59.305 41.667 0.00 0.00 45.76 2.24
54 55 5.872617 CACCTGTGTGATCCGAAAATTACTA 59.127 40.000 0.00 0.00 45.76 1.82
55 56 6.370442 CACCTGTGTGATCCGAAAATTACTAA 59.630 38.462 0.00 0.00 45.76 2.24
56 57 6.594159 ACCTGTGTGATCCGAAAATTACTAAG 59.406 38.462 0.00 0.00 0.00 2.18
57 58 6.594159 CCTGTGTGATCCGAAAATTACTAAGT 59.406 38.462 0.00 0.00 0.00 2.24
58 59 7.119262 CCTGTGTGATCCGAAAATTACTAAGTT 59.881 37.037 0.00 0.00 0.00 2.66
59 60 9.146984 CTGTGTGATCCGAAAATTACTAAGTTA 57.853 33.333 0.00 0.00 0.00 2.24
60 61 9.146984 TGTGTGATCCGAAAATTACTAAGTTAG 57.853 33.333 8.41 8.41 0.00 2.34
61 62 9.148104 GTGTGATCCGAAAATTACTAAGTTAGT 57.852 33.333 19.15 19.15 42.68 2.24
62 63 9.146984 TGTGATCCGAAAATTACTAAGTTAGTG 57.853 33.333 23.14 6.56 39.81 2.74
63 64 9.148104 GTGATCCGAAAATTACTAAGTTAGTGT 57.852 33.333 23.14 10.59 39.81 3.55
64 65 9.146984 TGATCCGAAAATTACTAAGTTAGTGTG 57.853 33.333 23.14 6.82 39.81 3.82
65 66 7.355332 TCCGAAAATTACTAAGTTAGTGTGC 57.645 36.000 23.14 5.95 39.81 4.57
66 67 6.930164 TCCGAAAATTACTAAGTTAGTGTGCA 59.070 34.615 23.14 2.67 39.81 4.57
67 68 7.117236 TCCGAAAATTACTAAGTTAGTGTGCAG 59.883 37.037 23.14 9.74 39.81 4.41
68 69 6.736853 CGAAAATTACTAAGTTAGTGTGCAGC 59.263 38.462 23.14 9.39 39.81 5.25
69 70 5.779806 AATTACTAAGTTAGTGTGCAGCG 57.220 39.130 23.14 0.00 39.81 5.18
70 71 1.429463 ACTAAGTTAGTGTGCAGCGC 58.571 50.000 14.82 0.00 37.69 5.92
71 72 0.721718 CTAAGTTAGTGTGCAGCGCC 59.278 55.000 2.29 0.00 0.00 6.53
72 73 0.320374 TAAGTTAGTGTGCAGCGCCT 59.680 50.000 2.29 2.90 0.00 5.52
73 74 1.230635 AAGTTAGTGTGCAGCGCCTG 61.231 55.000 2.29 2.69 34.12 4.85
74 75 1.667830 GTTAGTGTGCAGCGCCTGA 60.668 57.895 2.29 0.00 32.44 3.86
75 76 1.374631 TTAGTGTGCAGCGCCTGAG 60.375 57.895 2.29 0.00 32.44 3.35
76 77 1.815817 TTAGTGTGCAGCGCCTGAGA 61.816 55.000 2.29 0.00 32.44 3.27
77 78 2.218037 TAGTGTGCAGCGCCTGAGAG 62.218 60.000 2.29 0.00 32.44 3.20
84 85 2.025441 GCGCCTGAGAGCTAGACG 59.975 66.667 0.00 0.00 35.67 4.18
85 86 2.025441 CGCCTGAGAGCTAGACGC 59.975 66.667 0.00 0.00 39.57 5.19
86 87 2.415426 GCCTGAGAGCTAGACGCC 59.585 66.667 0.00 0.00 40.39 5.68
87 88 2.418910 GCCTGAGAGCTAGACGCCA 61.419 63.158 0.00 0.00 40.39 5.69
88 89 1.435515 CCTGAGAGCTAGACGCCAC 59.564 63.158 0.00 0.00 40.39 5.01
89 90 1.315981 CCTGAGAGCTAGACGCCACA 61.316 60.000 0.00 0.00 40.39 4.17
90 91 0.179150 CTGAGAGCTAGACGCCACAC 60.179 60.000 0.00 0.00 40.39 3.82
91 92 0.609406 TGAGAGCTAGACGCCACACT 60.609 55.000 0.00 0.00 40.39 3.55
92 93 0.179150 GAGAGCTAGACGCCACACTG 60.179 60.000 0.00 0.00 40.39 3.66
93 94 0.896019 AGAGCTAGACGCCACACTGT 60.896 55.000 0.00 0.00 40.39 3.55
94 95 0.809385 GAGCTAGACGCCACACTGTA 59.191 55.000 0.00 0.00 40.39 2.74
95 96 1.405821 GAGCTAGACGCCACACTGTAT 59.594 52.381 0.00 0.00 40.39 2.29
96 97 2.617308 GAGCTAGACGCCACACTGTATA 59.383 50.000 0.00 0.00 40.39 1.47
97 98 2.619177 AGCTAGACGCCACACTGTATAG 59.381 50.000 0.00 0.00 40.39 1.31
98 99 2.358267 GCTAGACGCCACACTGTATAGT 59.642 50.000 0.00 0.00 37.75 2.12
110 111 2.358267 ACTGTATAGTGTGGCGTCTAGC 59.642 50.000 0.00 0.00 39.66 3.42
111 112 3.936031 ACTGTATAGTGTGGCGTCTAGCT 60.936 47.826 0.00 0.00 40.04 3.32
112 113 5.749989 ACTGTATAGTGTGGCGTCTAGCTC 61.750 50.000 0.00 0.00 40.04 4.09
119 120 4.577246 GCGTCTAGCTCCCAGGCG 62.577 72.222 4.62 4.62 43.80 5.52
120 121 3.141488 CGTCTAGCTCCCAGGCGT 61.141 66.667 0.78 0.00 36.41 5.68
121 122 2.711922 CGTCTAGCTCCCAGGCGTT 61.712 63.158 0.78 0.00 36.41 4.84
122 123 1.153549 GTCTAGCTCCCAGGCGTTG 60.154 63.158 0.00 0.00 37.29 4.10
123 124 2.512515 CTAGCTCCCAGGCGTTGC 60.513 66.667 0.00 0.00 37.29 4.17
124 125 3.315142 CTAGCTCCCAGGCGTTGCA 62.315 63.158 0.00 0.00 37.29 4.08
125 126 3.605749 TAGCTCCCAGGCGTTGCAC 62.606 63.158 0.00 0.00 37.29 4.57
127 128 2.662596 CTCCCAGGCGTTGCACTA 59.337 61.111 0.00 0.00 0.00 2.74
128 129 1.448540 CTCCCAGGCGTTGCACTAG 60.449 63.158 0.00 0.00 0.00 2.57
129 130 2.172483 CTCCCAGGCGTTGCACTAGT 62.172 60.000 0.00 0.00 0.00 2.57
130 131 2.034879 CCCAGGCGTTGCACTAGTG 61.035 63.158 18.93 18.93 0.00 2.74
140 141 2.262603 CACTAGTGCAGCGCCTGA 59.737 61.111 10.54 0.00 32.44 3.86
141 142 1.808799 CACTAGTGCAGCGCCTGAG 60.809 63.158 10.54 0.34 32.44 3.35
142 143 1.979155 ACTAGTGCAGCGCCTGAGA 60.979 57.895 2.29 0.00 32.44 3.27
143 144 1.226916 CTAGTGCAGCGCCTGAGAG 60.227 63.158 2.29 0.00 32.44 3.20
144 145 3.362399 TAGTGCAGCGCCTGAGAGC 62.362 63.158 2.29 0.00 39.42 4.09
153 154 3.150335 CCTGAGAGCTAGGCGCCA 61.150 66.667 31.54 14.00 40.39 5.69
154 155 2.105930 CTGAGAGCTAGGCGCCAC 59.894 66.667 31.54 17.93 40.39 5.01
155 156 3.764810 CTGAGAGCTAGGCGCCACG 62.765 68.421 31.54 19.97 40.39 4.94
156 157 4.577246 GAGAGCTAGGCGCCACGG 62.577 72.222 31.54 18.60 40.39 4.94
161 162 4.514577 CTAGGCGCCACGGGTCAG 62.515 72.222 31.54 9.46 0.00 3.51
172 173 2.746277 GGGTCAGCCGCGTGAAAT 60.746 61.111 4.92 0.00 34.97 2.17
173 174 1.448893 GGGTCAGCCGCGTGAAATA 60.449 57.895 4.92 0.00 34.97 1.40
174 175 1.429148 GGGTCAGCCGCGTGAAATAG 61.429 60.000 4.92 0.00 34.97 1.73
175 176 0.739813 GGTCAGCCGCGTGAAATAGT 60.740 55.000 4.92 0.00 0.00 2.12
176 177 1.076332 GTCAGCCGCGTGAAATAGTT 58.924 50.000 4.92 0.00 0.00 2.24
177 178 1.463444 GTCAGCCGCGTGAAATAGTTT 59.537 47.619 4.92 0.00 0.00 2.66
178 179 1.730064 TCAGCCGCGTGAAATAGTTTC 59.270 47.619 4.92 0.00 40.08 2.78
179 180 1.463056 CAGCCGCGTGAAATAGTTTCA 59.537 47.619 4.92 1.24 46.68 2.69
189 190 5.917541 TGAAATAGTTTCACGGACAGTTC 57.082 39.130 1.24 0.00 44.21 3.01
190 191 5.361427 TGAAATAGTTTCACGGACAGTTCA 58.639 37.500 1.24 0.00 44.21 3.18
191 192 5.995282 TGAAATAGTTTCACGGACAGTTCAT 59.005 36.000 1.24 0.00 44.21 2.57
192 193 6.485313 TGAAATAGTTTCACGGACAGTTCATT 59.515 34.615 1.24 0.00 44.21 2.57
193 194 6.481954 AATAGTTTCACGGACAGTTCATTC 57.518 37.500 0.00 0.00 0.00 2.67
194 195 4.073293 AGTTTCACGGACAGTTCATTCT 57.927 40.909 0.00 0.00 0.00 2.40
195 196 3.809832 AGTTTCACGGACAGTTCATTCTG 59.190 43.478 0.00 0.00 40.80 3.02
197 198 2.754472 TCACGGACAGTTCATTCTGTG 58.246 47.619 4.06 4.48 46.81 3.66
199 200 3.685139 ACGGACAGTTCATTCTGTGAT 57.315 42.857 4.06 0.00 46.81 3.06
200 201 4.008074 ACGGACAGTTCATTCTGTGATT 57.992 40.909 4.06 0.00 46.81 2.57
201 202 4.389374 ACGGACAGTTCATTCTGTGATTT 58.611 39.130 4.06 0.00 46.81 2.17
202 203 4.214119 ACGGACAGTTCATTCTGTGATTTG 59.786 41.667 4.06 0.00 46.81 2.32
203 204 4.452114 CGGACAGTTCATTCTGTGATTTGA 59.548 41.667 4.06 0.00 46.81 2.69
204 205 5.122869 CGGACAGTTCATTCTGTGATTTGAT 59.877 40.000 4.06 0.00 46.81 2.57
205 206 6.348786 CGGACAGTTCATTCTGTGATTTGATT 60.349 38.462 4.06 0.00 46.81 2.57
206 207 7.373493 GGACAGTTCATTCTGTGATTTGATTT 58.627 34.615 4.06 0.00 46.81 2.17
207 208 7.540055 GGACAGTTCATTCTGTGATTTGATTTC 59.460 37.037 4.06 0.00 46.81 2.17
208 209 7.080099 ACAGTTCATTCTGTGATTTGATTTCG 58.920 34.615 0.00 0.00 45.40 3.46
209 210 7.080099 CAGTTCATTCTGTGATTTGATTTCGT 58.920 34.615 0.00 0.00 36.54 3.85
210 211 7.592533 CAGTTCATTCTGTGATTTGATTTCGTT 59.407 33.333 0.00 0.00 36.54 3.85
211 212 8.137437 AGTTCATTCTGTGATTTGATTTCGTTT 58.863 29.630 0.00 0.00 36.54 3.60
212 213 9.393249 GTTCATTCTGTGATTTGATTTCGTTTA 57.607 29.630 0.00 0.00 36.54 2.01
217 218 8.786826 TCTGTGATTTGATTTCGTTTATAGGT 57.213 30.769 0.00 0.00 0.00 3.08
218 219 8.879759 TCTGTGATTTGATTTCGTTTATAGGTC 58.120 33.333 0.00 0.00 0.00 3.85
219 220 8.554835 TGTGATTTGATTTCGTTTATAGGTCA 57.445 30.769 0.00 0.00 0.00 4.02
220 221 9.004717 TGTGATTTGATTTCGTTTATAGGTCAA 57.995 29.630 0.00 0.00 0.00 3.18
221 222 9.834628 GTGATTTGATTTCGTTTATAGGTCAAA 57.165 29.630 0.00 0.00 38.14 2.69
227 228 9.834628 TGATTTCGTTTATAGGTCAAATTTGTC 57.165 29.630 17.47 12.07 0.00 3.18
228 229 9.834628 GATTTCGTTTATAGGTCAAATTTGTCA 57.165 29.630 17.47 0.00 0.00 3.58
241 242 2.126914 TTTGTCAAATTTGCCGGACG 57.873 45.000 13.54 0.00 33.04 4.79
242 243 0.312416 TTGTCAAATTTGCCGGACGG 59.688 50.000 13.54 6.35 38.57 4.79
243 244 1.211709 GTCAAATTTGCCGGACGGG 59.788 57.895 13.54 3.74 39.58 5.28
265 266 2.918802 TACGGTGCGGTGGTCCTT 60.919 61.111 0.00 0.00 0.00 3.36
267 268 4.003788 CGGTGCGGTGGTCCTTCT 62.004 66.667 0.00 0.00 0.00 2.85
268 269 2.047179 GGTGCGGTGGTCCTTCTC 60.047 66.667 0.00 0.00 0.00 2.87
271 272 0.951040 GTGCGGTGGTCCTTCTCTTG 60.951 60.000 0.00 0.00 0.00 3.02
273 274 1.738099 CGGTGGTCCTTCTCTTGCG 60.738 63.158 0.00 0.00 0.00 4.85
275 276 0.951040 GGTGGTCCTTCTCTTGCGTG 60.951 60.000 0.00 0.00 0.00 5.34
319 320 2.125106 GAATTCCAGCGGCCGACT 60.125 61.111 33.48 22.91 0.00 4.18
335 336 1.726791 CGACTGTGAATTAGCAACGCT 59.273 47.619 0.00 0.00 43.41 5.07
342 343 6.072728 ACTGTGAATTAGCAACGCTGAAATAA 60.073 34.615 0.00 0.00 40.10 1.40
393 394 1.228154 GTCCTTTGCGTCCAAGGGT 60.228 57.895 8.88 0.00 45.61 4.34
787 818 1.463018 ATCCCCATGCTCTCCCTCC 60.463 63.158 0.00 0.00 0.00 4.30
788 819 1.983035 ATCCCCATGCTCTCCCTCCT 61.983 60.000 0.00 0.00 0.00 3.69
789 820 2.146061 CCCCATGCTCTCCCTCCTC 61.146 68.421 0.00 0.00 0.00 3.71
854 885 4.286320 CCCTTCGCCTCCGATCCG 62.286 72.222 0.00 0.00 43.97 4.18
988 1370 3.121030 CCGGCAGCAGGTTCTTCG 61.121 66.667 2.85 0.00 0.00 3.79
1354 1737 1.193874 GTTTGACCTTTTCGATCGCGT 59.806 47.619 11.09 0.70 38.98 6.01
1361 1744 0.509499 TTTTCGATCGCGTGGTGTTC 59.491 50.000 11.09 0.00 38.98 3.18
1393 1780 0.892755 TCTGTTTCTATCGCCGGTGT 59.107 50.000 16.01 5.10 0.00 4.16
1394 1781 2.093890 TCTGTTTCTATCGCCGGTGTA 58.906 47.619 16.01 6.05 0.00 2.90
1395 1782 2.492881 TCTGTTTCTATCGCCGGTGTAA 59.507 45.455 16.01 3.30 0.00 2.41
1431 1818 3.731136 TGCGCGCAGAAGAAGTTT 58.269 50.000 33.09 0.00 0.00 2.66
1567 1954 3.461773 AGGTCAGCCCACGGATCG 61.462 66.667 0.00 0.00 34.66 3.69
1719 2112 9.490663 GTTTGATATCATTTTTCTACGTTCCTG 57.509 33.333 6.17 0.00 0.00 3.86
1749 2142 2.033927 TGTCATGATCGCTCAGCTAGAC 59.966 50.000 0.00 1.77 34.12 2.59
1810 2203 3.985019 TGGGATAAAACGTTAGCAGGA 57.015 42.857 0.00 0.00 0.00 3.86
2087 2480 8.831550 GGTTATTCTCCTGATTTCTTCACATAC 58.168 37.037 0.00 0.00 0.00 2.39
2172 2565 8.589335 TGTATCGGTTTGCTATTAGATTTCTC 57.411 34.615 0.00 0.00 0.00 2.87
2264 2657 2.926200 CAGTTCATTGAGTAGGCAGTCG 59.074 50.000 0.00 0.00 0.00 4.18
2265 2658 2.563179 AGTTCATTGAGTAGGCAGTCGT 59.437 45.455 0.00 0.00 0.00 4.34
2267 2660 3.232213 TCATTGAGTAGGCAGTCGTTC 57.768 47.619 0.00 0.00 0.00 3.95
2269 2662 1.629043 TTGAGTAGGCAGTCGTTCCT 58.371 50.000 0.00 0.00 36.51 3.36
2270 2663 1.629043 TGAGTAGGCAGTCGTTCCTT 58.371 50.000 0.00 0.00 34.02 3.36
2273 2666 3.181458 TGAGTAGGCAGTCGTTCCTTTTT 60.181 43.478 0.00 0.00 34.02 1.94
2308 2701 3.306613 ACCTAGGTAGTGTATTCCTGGC 58.693 50.000 14.41 0.00 33.34 4.85
2475 2872 4.566488 GGAGTGATCATTGGAAGGAACAGT 60.566 45.833 0.00 0.00 29.66 3.55
2476 2873 5.338381 GGAGTGATCATTGGAAGGAACAGTA 60.338 44.000 0.00 0.00 27.63 2.74
2636 3033 4.578105 GGGACCAGCTTTAATGAATCTCAG 59.422 45.833 0.00 0.00 0.00 3.35
2749 3147 8.584063 TTCGTTCCTAAATATAAGCCCTTTTT 57.416 30.769 0.00 0.00 0.00 1.94
2917 3442 6.275494 TGTTGACTTATTAGGTCACGATGA 57.725 37.500 8.04 0.00 42.41 2.92
3075 3600 3.006110 CACACTTGATTGGGATTTGCACT 59.994 43.478 0.00 0.00 0.00 4.40
3191 3717 2.488153 CGTTTCCAGGATTCAGAAACCC 59.512 50.000 5.84 1.70 44.09 4.11
3265 3791 2.363038 ACATGCATGCTGTTTGTGAAGT 59.637 40.909 26.53 0.00 0.00 3.01
3266 3792 3.569277 ACATGCATGCTGTTTGTGAAGTA 59.431 39.130 26.53 0.00 0.00 2.24
3373 4005 7.804843 ATTAATATAGATCGGAGGGAGTACG 57.195 40.000 0.00 0.00 0.00 3.67
3423 4055 5.233988 AGTTATGCACTGAAGAGTTCACTC 58.766 41.667 0.00 0.00 37.54 3.51
3642 4277 4.177026 CTCTGTACATGCCAACTAGTGAC 58.823 47.826 0.00 0.00 0.00 3.67
3730 4379 0.764890 TGCTACTGTTTGGAGGCAGT 59.235 50.000 0.00 0.00 46.33 4.40
3755 4404 1.423395 CTTGTCTGCTCCACGAAGAC 58.577 55.000 0.00 0.00 40.61 3.01
3760 4409 0.035458 CTGCTCCACGAAGACCCTTT 59.965 55.000 0.00 0.00 0.00 3.11
3843 4492 2.277084 CCGCGGAACTAGCAAAATAGT 58.723 47.619 24.07 0.00 37.61 2.12
3891 4540 7.012515 ACACTAGACTAGAGATGGATTTGTACG 59.987 40.741 16.55 0.00 0.00 3.67
3893 4542 6.627395 AGACTAGAGATGGATTTGTACGAG 57.373 41.667 0.00 0.00 0.00 4.18
4063 4712 6.471519 GCATTTTCTGTTGAATAGATGAGTGC 59.528 38.462 7.23 7.23 31.56 4.40
4151 4800 9.783256 GTTGCAACTATTAAGTGGTATTTTAGG 57.217 33.333 22.36 0.00 35.62 2.69
4208 4858 4.196971 GAGTTAGGTCAGTTTGTGGTTGT 58.803 43.478 0.00 0.00 0.00 3.32
4248 4898 8.458843 GTTTGCTTCCTTTATAATCTGCTGTTA 58.541 33.333 0.00 0.00 0.00 2.41
4267 4917 7.814107 TGCTGTTAGAAATTAGCCAGAAAAATG 59.186 33.333 0.00 0.00 35.36 2.32
4374 5024 4.504097 CACAGCCTTAAAAGAGTGTTTTGC 59.496 41.667 8.19 3.62 0.00 3.68
4419 5080 7.364762 CCTTTGATTACATACCCTACACTGAGT 60.365 40.741 0.00 0.00 0.00 3.41
4965 5705 4.504097 GGAGTTTGTTGAGTTCATTTGTGC 59.496 41.667 0.00 0.00 0.00 4.57
4994 5734 8.184192 CCTTTGCAGTTAGTTATTTATCACTGG 58.816 37.037 0.00 0.00 33.64 4.00
5041 5781 6.320494 AGTCTTATATCCTCTAGTTGCACG 57.680 41.667 0.00 0.00 0.00 5.34
5217 5958 1.966451 GAAGGTTGTGGACTGCCGG 60.966 63.158 0.00 0.00 36.79 6.13
5747 6488 5.584649 TGTGAAACTGTTCTTCGAGTCAATT 59.415 36.000 0.00 0.00 38.04 2.32
5765 6506 3.814504 ATTTGTGGAGAGGTTGGTGAT 57.185 42.857 0.00 0.00 0.00 3.06
5776 6517 2.878406 AGGTTGGTGATTTGTCACTTCG 59.122 45.455 8.30 0.00 40.28 3.79
5979 6720 5.226396 TGACTTGCCCATTTCGTATTTTTG 58.774 37.500 0.00 0.00 0.00 2.44
6098 6840 7.699391 CCGCAAATTATATCATGAACATCCATC 59.301 37.037 0.00 0.00 0.00 3.51
6105 6847 0.465705 ATGAACATCCATCGCCTCGT 59.534 50.000 0.00 0.00 0.00 4.18
6207 6949 3.243336 GCTAGTTGTCGTTTCGAGTCAT 58.757 45.455 0.00 0.00 36.23 3.06
6221 6963 2.633488 GAGTCATGTAGGGTTTCAGCC 58.367 52.381 0.00 0.00 35.59 4.85
6223 6965 2.644798 AGTCATGTAGGGTTTCAGCCTT 59.355 45.455 0.00 0.00 45.25 4.35
6224 6966 3.844211 AGTCATGTAGGGTTTCAGCCTTA 59.156 43.478 0.00 0.00 45.25 2.69
6225 6967 4.288626 AGTCATGTAGGGTTTCAGCCTTAA 59.711 41.667 0.00 0.00 45.25 1.85
6226 6968 5.044846 AGTCATGTAGGGTTTCAGCCTTAAT 60.045 40.000 0.00 0.00 45.25 1.40
6227 6969 5.652452 GTCATGTAGGGTTTCAGCCTTAATT 59.348 40.000 0.00 0.00 45.25 1.40
6228 6970 6.152831 GTCATGTAGGGTTTCAGCCTTAATTT 59.847 38.462 0.00 0.00 45.25 1.82
6229 6971 6.377146 TCATGTAGGGTTTCAGCCTTAATTTC 59.623 38.462 0.00 0.00 45.25 2.17
6230 6972 5.014202 TGTAGGGTTTCAGCCTTAATTTCC 58.986 41.667 0.00 0.00 45.25 3.13
6231 6973 3.441101 AGGGTTTCAGCCTTAATTTCCC 58.559 45.455 0.00 0.00 45.25 3.97
6232 6974 3.169908 GGGTTTCAGCCTTAATTTCCCA 58.830 45.455 0.00 0.00 31.81 4.37
6233 6975 3.580895 GGGTTTCAGCCTTAATTTCCCAA 59.419 43.478 0.00 0.00 31.81 4.12
6234 6976 4.041075 GGGTTTCAGCCTTAATTTCCCAAA 59.959 41.667 0.00 0.00 31.81 3.28
6235 6977 4.994852 GGTTTCAGCCTTAATTTCCCAAAC 59.005 41.667 0.00 0.00 0.00 2.93
6236 6978 4.882842 TTCAGCCTTAATTTCCCAAACC 57.117 40.909 0.00 0.00 0.00 3.27
6237 6979 3.850752 TCAGCCTTAATTTCCCAAACCA 58.149 40.909 0.00 0.00 0.00 3.67
6238 6980 3.576550 TCAGCCTTAATTTCCCAAACCAC 59.423 43.478 0.00 0.00 0.00 4.16
6239 6981 3.578282 CAGCCTTAATTTCCCAAACCACT 59.422 43.478 0.00 0.00 0.00 4.00
6240 6982 4.770010 CAGCCTTAATTTCCCAAACCACTA 59.230 41.667 0.00 0.00 0.00 2.74
6241 6983 5.245075 CAGCCTTAATTTCCCAAACCACTAA 59.755 40.000 0.00 0.00 0.00 2.24
6461 7587 6.656003 AGTTGTCGCTGATTTAGTACAAAAC 58.344 36.000 0.00 0.00 36.69 2.43
6492 7618 5.230942 CCACCGATCCATATTACTTGTCTC 58.769 45.833 0.00 0.00 0.00 3.36
6566 7695 9.303116 ACATCCGTATCTAGACAAATCTAAGAT 57.697 33.333 0.00 0.00 36.98 2.40
6680 7811 9.301153 ACTTGCTTTATTAAACTCACAACTTTG 57.699 29.630 0.00 0.00 0.00 2.77
6731 7862 7.506938 TGAGTTATGATCTGATGTCCTGATGTA 59.493 37.037 0.00 0.00 34.18 2.29
6765 7896 4.532126 TGTCAGTTTAGGTGGATGTCTGAT 59.468 41.667 0.00 0.00 33.98 2.90
6901 8032 4.717233 AGTCAGCATTGTTTGTTGTTCA 57.283 36.364 0.00 0.00 37.75 3.18
6977 8108 3.551635 TTCTTGGATTTTGGGGCCTTA 57.448 42.857 0.84 0.00 0.00 2.69
7063 8194 3.690460 CAATGTCCTTGGCTAGTCCTTT 58.310 45.455 0.00 0.00 35.26 3.11
7064 8195 2.859165 TGTCCTTGGCTAGTCCTTTG 57.141 50.000 0.00 0.00 35.26 2.77
7105 8236 6.201997 GTGGTGGTATTTTTCATTTCACAACC 59.798 38.462 0.00 0.00 31.73 3.77
7647 8782 6.367695 ACTTTTGTCTTTGTTAAGTTGTTGGC 59.632 34.615 0.00 0.00 32.98 4.52
7648 8783 5.652994 TTGTCTTTGTTAAGTTGTTGGCT 57.347 34.783 0.00 0.00 32.98 4.75
7649 8784 4.992688 TGTCTTTGTTAAGTTGTTGGCTG 58.007 39.130 0.00 0.00 32.98 4.85
7650 8785 4.461081 TGTCTTTGTTAAGTTGTTGGCTGT 59.539 37.500 0.00 0.00 32.98 4.40
7652 8787 5.288472 GTCTTTGTTAAGTTGTTGGCTGTTG 59.712 40.000 0.00 0.00 32.98 3.33
7653 8788 4.792521 TTGTTAAGTTGTTGGCTGTTGT 57.207 36.364 0.00 0.00 0.00 3.32
7654 8789 4.364415 TGTTAAGTTGTTGGCTGTTGTC 57.636 40.909 0.00 0.00 0.00 3.18
7655 8790 3.129638 TGTTAAGTTGTTGGCTGTTGTCC 59.870 43.478 0.00 0.00 0.00 4.02
7666 8801 1.602377 GCTGTTGTCCGTTTGCTACTT 59.398 47.619 0.00 0.00 0.00 2.24
7667 8802 2.803956 GCTGTTGTCCGTTTGCTACTTA 59.196 45.455 0.00 0.00 0.00 2.24
7782 8955 2.543012 CTGATGCTTATGCTCTTCGTGG 59.457 50.000 1.96 0.00 40.48 4.94
7784 8957 3.132111 TGATGCTTATGCTCTTCGTGGTA 59.868 43.478 1.96 0.00 40.48 3.25
7785 8958 3.819564 TGCTTATGCTCTTCGTGGTAT 57.180 42.857 1.96 0.00 40.48 2.73
7786 8959 3.457234 TGCTTATGCTCTTCGTGGTATG 58.543 45.455 1.96 0.00 40.48 2.39
7788 8961 3.457234 CTTATGCTCTTCGTGGTATGCA 58.543 45.455 0.00 0.00 34.88 3.96
7789 8962 2.627515 ATGCTCTTCGTGGTATGCAT 57.372 45.000 3.79 3.79 36.48 3.96
7790 8963 2.401583 TGCTCTTCGTGGTATGCATT 57.598 45.000 3.54 0.00 0.00 3.56
7791 8964 3.535280 TGCTCTTCGTGGTATGCATTA 57.465 42.857 3.54 0.00 0.00 1.90
7792 8965 4.071961 TGCTCTTCGTGGTATGCATTAT 57.928 40.909 3.54 0.00 0.00 1.28
7793 8966 3.809279 TGCTCTTCGTGGTATGCATTATG 59.191 43.478 3.54 0.00 0.00 1.90
7794 8967 3.187227 GCTCTTCGTGGTATGCATTATGG 59.813 47.826 3.54 0.00 0.00 2.74
7795 8968 4.380531 CTCTTCGTGGTATGCATTATGGT 58.619 43.478 3.54 0.00 0.00 3.55
7796 8969 4.126437 TCTTCGTGGTATGCATTATGGTG 58.874 43.478 3.54 0.00 0.00 4.17
7797 8970 2.844946 TCGTGGTATGCATTATGGTGG 58.155 47.619 3.54 0.00 0.00 4.61
7798 8971 2.436173 TCGTGGTATGCATTATGGTGGA 59.564 45.455 3.54 0.00 0.00 4.02
7799 8972 3.118223 TCGTGGTATGCATTATGGTGGAA 60.118 43.478 3.54 0.00 0.00 3.53
7800 8973 3.820467 CGTGGTATGCATTATGGTGGAAT 59.180 43.478 3.54 0.00 0.00 3.01
7801 8974 5.000591 CGTGGTATGCATTATGGTGGAATA 58.999 41.667 3.54 0.00 0.00 1.75
7802 8975 5.647658 CGTGGTATGCATTATGGTGGAATAT 59.352 40.000 3.54 0.00 0.00 1.28
7803 8976 6.150976 CGTGGTATGCATTATGGTGGAATATT 59.849 38.462 3.54 0.00 0.00 1.28
7804 8977 7.538575 GTGGTATGCATTATGGTGGAATATTC 58.461 38.462 3.54 6.93 0.00 1.75
7805 8978 7.394359 GTGGTATGCATTATGGTGGAATATTCT 59.606 37.037 14.95 0.00 0.00 2.40
7806 8979 8.610369 TGGTATGCATTATGGTGGAATATTCTA 58.390 33.333 14.95 6.41 0.00 2.10
7807 8980 8.893727 GGTATGCATTATGGTGGAATATTCTAC 58.106 37.037 20.47 20.47 37.87 2.59
7808 8981 9.672673 GTATGCATTATGGTGGAATATTCTACT 57.327 33.333 25.50 13.40 38.55 2.57
7810 8983 9.672673 ATGCATTATGGTGGAATATTCTACTAC 57.327 33.333 25.50 14.11 38.55 2.73
7811 8984 8.880244 TGCATTATGGTGGAATATTCTACTACT 58.120 33.333 25.50 15.35 38.55 2.57
7818 8991 8.647796 TGGTGGAATATTCTACTACTATTGTGG 58.352 37.037 25.50 0.00 38.55 4.17
7819 8992 8.095169 GGTGGAATATTCTACTACTATTGTGGG 58.905 40.741 25.50 0.00 38.55 4.61
7820 8993 7.603024 GTGGAATATTCTACTACTATTGTGGGC 59.397 40.741 21.12 0.00 35.98 5.36
7821 8994 7.512746 TGGAATATTCTACTACTATTGTGGGCT 59.487 37.037 14.95 0.00 0.00 5.19
7822 8995 7.819900 GGAATATTCTACTACTATTGTGGGCTG 59.180 40.741 14.95 0.00 0.00 4.85
7823 8996 7.857404 ATATTCTACTACTATTGTGGGCTGT 57.143 36.000 0.00 0.00 0.00 4.40
7824 8997 6.561519 ATTCTACTACTATTGTGGGCTGTT 57.438 37.500 0.00 0.00 0.00 3.16
7825 8998 5.593679 TCTACTACTATTGTGGGCTGTTC 57.406 43.478 0.00 0.00 0.00 3.18
7826 8999 3.629142 ACTACTATTGTGGGCTGTTCC 57.371 47.619 0.00 0.00 0.00 3.62
7891 9064 4.025647 GGTTGCTCTGTAAATATGCTCGTC 60.026 45.833 0.00 0.00 0.00 4.20
7902 9075 9.465985 TGTAAATATGCTCGTCGTATAAATTGA 57.534 29.630 0.00 0.00 0.00 2.57
7911 9084 9.092322 GCTCGTCGTATAAATTGAATGTTATTG 57.908 33.333 0.00 0.00 0.00 1.90
7914 9087 9.710979 CGTCGTATAAATTGAATGTTATTGGTT 57.289 29.630 0.00 0.00 0.00 3.67
7941 9114 0.963962 AAACTGGAGCCAATGCACAG 59.036 50.000 0.00 0.00 45.04 3.66
7945 9118 1.246056 TGGAGCCAATGCACAGAAGC 61.246 55.000 0.00 0.00 41.13 3.86
7946 9119 0.964358 GGAGCCAATGCACAGAAGCT 60.964 55.000 0.00 0.00 41.13 3.74
7959 9132 2.224548 ACAGAAGCTAAGGAGGCGTTTT 60.225 45.455 0.00 0.00 34.52 2.43
7960 9133 2.160417 CAGAAGCTAAGGAGGCGTTTTG 59.840 50.000 0.00 0.00 34.52 2.44
7961 9134 2.152016 GAAGCTAAGGAGGCGTTTTGT 58.848 47.619 0.00 0.00 34.52 2.83
7962 9135 2.271944 AGCTAAGGAGGCGTTTTGTT 57.728 45.000 0.00 0.00 34.52 2.83
7963 9136 2.152016 AGCTAAGGAGGCGTTTTGTTC 58.848 47.619 0.00 0.00 34.52 3.18
7964 9137 1.199327 GCTAAGGAGGCGTTTTGTTCC 59.801 52.381 0.00 0.00 0.00 3.62
7965 9138 2.500229 CTAAGGAGGCGTTTTGTTCCA 58.500 47.619 0.00 0.00 32.02 3.53
7966 9139 1.029681 AAGGAGGCGTTTTGTTCCAC 58.970 50.000 0.00 0.00 32.02 4.02
7967 9140 0.182775 AGGAGGCGTTTTGTTCCACT 59.817 50.000 0.00 0.00 32.02 4.00
7968 9141 0.591659 GGAGGCGTTTTGTTCCACTC 59.408 55.000 0.00 0.00 0.00 3.51
7969 9142 1.594331 GAGGCGTTTTGTTCCACTCT 58.406 50.000 0.00 0.00 0.00 3.24
7970 9143 1.264288 GAGGCGTTTTGTTCCACTCTG 59.736 52.381 0.00 0.00 0.00 3.35
7971 9144 0.310854 GGCGTTTTGTTCCACTCTGG 59.689 55.000 0.00 0.00 39.43 3.86
7972 9145 1.021968 GCGTTTTGTTCCACTCTGGT 58.978 50.000 0.00 0.00 39.03 4.00
7973 9146 2.215196 GCGTTTTGTTCCACTCTGGTA 58.785 47.619 0.00 0.00 39.03 3.25
7974 9147 2.032290 GCGTTTTGTTCCACTCTGGTAC 60.032 50.000 0.00 0.00 39.03 3.34
7975 9148 3.463944 CGTTTTGTTCCACTCTGGTACT 58.536 45.455 0.00 0.00 38.46 2.73
7976 9149 3.247648 CGTTTTGTTCCACTCTGGTACTG 59.752 47.826 0.00 0.00 38.46 2.74
7977 9150 4.196971 GTTTTGTTCCACTCTGGTACTGT 58.803 43.478 0.00 0.00 38.46 3.55
7978 9151 4.497291 TTTGTTCCACTCTGGTACTGTT 57.503 40.909 0.00 0.00 38.46 3.16
7979 9152 4.497291 TTGTTCCACTCTGGTACTGTTT 57.503 40.909 0.00 0.00 38.46 2.83
7980 9153 4.497291 TGTTCCACTCTGGTACTGTTTT 57.503 40.909 0.00 0.00 38.46 2.43
7981 9154 4.448210 TGTTCCACTCTGGTACTGTTTTC 58.552 43.478 0.00 0.00 38.46 2.29
7982 9155 3.380479 TCCACTCTGGTACTGTTTTCG 57.620 47.619 0.00 0.00 39.03 3.46
7983 9156 2.960384 TCCACTCTGGTACTGTTTTCGA 59.040 45.455 0.00 0.00 39.03 3.71
7984 9157 3.057734 CCACTCTGGTACTGTTTTCGAC 58.942 50.000 0.00 0.00 31.35 4.20
7985 9158 3.243771 CCACTCTGGTACTGTTTTCGACT 60.244 47.826 0.00 0.00 31.35 4.18
7986 9159 4.369182 CACTCTGGTACTGTTTTCGACTT 58.631 43.478 0.00 0.00 0.00 3.01
7987 9160 4.809426 CACTCTGGTACTGTTTTCGACTTT 59.191 41.667 0.00 0.00 0.00 2.66
7988 9161 5.048507 ACTCTGGTACTGTTTTCGACTTTC 58.951 41.667 0.00 0.00 0.00 2.62
7989 9162 5.013568 TCTGGTACTGTTTTCGACTTTCA 57.986 39.130 0.00 0.00 0.00 2.69
7990 9163 5.047847 TCTGGTACTGTTTTCGACTTTCAG 58.952 41.667 0.00 0.00 0.00 3.02
7991 9164 4.761975 TGGTACTGTTTTCGACTTTCAGT 58.238 39.130 13.46 13.46 41.32 3.41
7992 9165 5.180271 TGGTACTGTTTTCGACTTTCAGTT 58.820 37.500 13.94 3.40 39.54 3.16
7993 9166 5.644636 TGGTACTGTTTTCGACTTTCAGTTT 59.355 36.000 13.94 0.00 39.54 2.66
7994 9167 6.183360 TGGTACTGTTTTCGACTTTCAGTTTC 60.183 38.462 13.94 9.48 39.54 2.78
7995 9168 4.893795 ACTGTTTTCGACTTTCAGTTTCG 58.106 39.130 6.09 0.00 36.17 3.46
7996 9169 4.201783 ACTGTTTTCGACTTTCAGTTTCGG 60.202 41.667 6.09 0.00 36.17 4.30
7997 9170 3.064271 TGTTTTCGACTTTCAGTTTCGGG 59.936 43.478 0.00 0.00 33.50 5.14
7998 9171 2.894763 TTCGACTTTCAGTTTCGGGA 57.105 45.000 0.00 0.00 33.50 5.14
7999 9172 2.894763 TCGACTTTCAGTTTCGGGAA 57.105 45.000 0.00 0.00 33.50 3.97
8000 9173 2.750948 TCGACTTTCAGTTTCGGGAAG 58.249 47.619 0.00 0.00 33.50 3.46
8001 9174 1.194772 CGACTTTCAGTTTCGGGAAGC 59.805 52.381 0.00 0.00 0.00 3.86
8002 9175 1.194772 GACTTTCAGTTTCGGGAAGCG 59.805 52.381 0.00 0.00 0.00 4.68
8003 9176 0.110192 CTTTCAGTTTCGGGAAGCGC 60.110 55.000 0.00 0.00 0.00 5.92
8004 9177 0.534203 TTTCAGTTTCGGGAAGCGCT 60.534 50.000 2.64 2.64 0.00 5.92
8005 9178 1.227999 TTCAGTTTCGGGAAGCGCTG 61.228 55.000 12.58 0.00 0.00 5.18
8006 9179 3.050275 AGTTTCGGGAAGCGCTGC 61.050 61.111 12.58 9.65 0.00 5.25
8007 9180 3.050275 GTTTCGGGAAGCGCTGCT 61.050 61.111 16.75 0.00 42.56 4.24
8019 9192 3.959573 AGCGCTGCTTCTGATATTTTC 57.040 42.857 10.39 0.00 33.89 2.29
8020 9193 3.539604 AGCGCTGCTTCTGATATTTTCT 58.460 40.909 10.39 0.00 33.89 2.52
8021 9194 3.559242 AGCGCTGCTTCTGATATTTTCTC 59.441 43.478 10.39 0.00 33.89 2.87
8022 9195 3.303659 GCGCTGCTTCTGATATTTTCTCC 60.304 47.826 0.00 0.00 0.00 3.71
8023 9196 4.125703 CGCTGCTTCTGATATTTTCTCCT 58.874 43.478 0.00 0.00 0.00 3.69
8024 9197 4.025061 CGCTGCTTCTGATATTTTCTCCTG 60.025 45.833 0.00 0.00 0.00 3.86
8025 9198 5.121811 GCTGCTTCTGATATTTTCTCCTGA 58.878 41.667 0.00 0.00 0.00 3.86
8026 9199 5.764192 GCTGCTTCTGATATTTTCTCCTGAT 59.236 40.000 0.00 0.00 0.00 2.90
8027 9200 6.293516 GCTGCTTCTGATATTTTCTCCTGATG 60.294 42.308 0.00 0.00 0.00 3.07
8028 9201 6.892485 TGCTTCTGATATTTTCTCCTGATGA 58.108 36.000 0.00 0.00 0.00 2.92
8029 9202 7.341030 TGCTTCTGATATTTTCTCCTGATGAA 58.659 34.615 0.00 0.00 0.00 2.57
8030 9203 7.997223 TGCTTCTGATATTTTCTCCTGATGAAT 59.003 33.333 0.00 0.00 0.00 2.57
8031 9204 9.499479 GCTTCTGATATTTTCTCCTGATGAATA 57.501 33.333 0.00 0.00 0.00 1.75
8033 9206 9.481340 TTCTGATATTTTCTCCTGATGAATACG 57.519 33.333 0.00 0.00 0.00 3.06
8034 9207 7.600375 TCTGATATTTTCTCCTGATGAATACGC 59.400 37.037 0.00 0.00 0.00 4.42
8035 9208 6.366061 TGATATTTTCTCCTGATGAATACGCG 59.634 38.462 3.53 3.53 0.00 6.01
8036 9209 3.520290 TTTCTCCTGATGAATACGCGT 57.480 42.857 19.17 19.17 0.00 6.01
8037 9210 3.520290 TTCTCCTGATGAATACGCGTT 57.480 42.857 20.78 0.00 0.00 4.84
8038 9211 3.520290 TCTCCTGATGAATACGCGTTT 57.480 42.857 20.78 6.76 0.00 3.60
8039 9212 3.857052 TCTCCTGATGAATACGCGTTTT 58.143 40.909 20.78 17.41 0.00 2.43
8040 9213 3.616821 TCTCCTGATGAATACGCGTTTTG 59.383 43.478 20.78 3.23 0.00 2.44
8041 9214 3.331150 TCCTGATGAATACGCGTTTTGT 58.669 40.909 20.78 6.86 0.00 2.83
8042 9215 3.749088 TCCTGATGAATACGCGTTTTGTT 59.251 39.130 20.78 7.89 0.00 2.83
8043 9216 4.214545 TCCTGATGAATACGCGTTTTGTTT 59.785 37.500 20.78 3.77 0.00 2.83
8044 9217 4.320690 CCTGATGAATACGCGTTTTGTTTG 59.679 41.667 20.78 4.73 0.00 2.93
8045 9218 4.222886 TGATGAATACGCGTTTTGTTTGG 58.777 39.130 20.78 0.00 0.00 3.28
8046 9219 3.965292 TGAATACGCGTTTTGTTTGGA 57.035 38.095 20.78 0.00 0.00 3.53
8047 9220 4.491234 TGAATACGCGTTTTGTTTGGAT 57.509 36.364 20.78 0.00 0.00 3.41
8048 9221 4.468643 TGAATACGCGTTTTGTTTGGATC 58.531 39.130 20.78 1.61 0.00 3.36
8049 9222 2.580729 TACGCGTTTTGTTTGGATCG 57.419 45.000 20.78 0.00 0.00 3.69
8050 9223 0.040781 ACGCGTTTTGTTTGGATCGG 60.041 50.000 5.58 0.00 0.00 4.18
8051 9224 0.727793 CGCGTTTTGTTTGGATCGGG 60.728 55.000 0.00 0.00 0.00 5.14
8052 9225 1.006825 GCGTTTTGTTTGGATCGGGC 61.007 55.000 0.00 0.00 0.00 6.13
8053 9226 0.727793 CGTTTTGTTTGGATCGGGCG 60.728 55.000 0.00 0.00 0.00 6.13
8054 9227 1.006825 GTTTTGTTTGGATCGGGCGC 61.007 55.000 0.00 0.00 0.00 6.53
8055 9228 2.465097 TTTTGTTTGGATCGGGCGCG 62.465 55.000 18.21 18.21 0.00 6.86
8056 9229 3.885538 TTGTTTGGATCGGGCGCGA 62.886 57.895 28.58 28.58 0.00 5.87
8057 9230 3.122323 GTTTGGATCGGGCGCGAA 61.122 61.111 30.01 11.19 0.00 4.70
8058 9231 3.122323 TTTGGATCGGGCGCGAAC 61.122 61.111 30.01 26.00 0.00 3.95
8062 9235 2.960129 GATCGGGCGCGAACGAAT 60.960 61.111 30.01 13.23 42.88 3.34
8063 9236 3.210419 GATCGGGCGCGAACGAATG 62.210 63.158 30.01 0.00 42.88 2.67
8070 9243 2.395690 GCGAACGAATGCGGACTG 59.604 61.111 0.00 0.00 43.17 3.51
8071 9244 3.081133 CGAACGAATGCGGACTGG 58.919 61.111 0.00 0.00 43.17 4.00
8072 9245 1.445410 CGAACGAATGCGGACTGGA 60.445 57.895 0.00 0.00 43.17 3.86
8073 9246 0.806102 CGAACGAATGCGGACTGGAT 60.806 55.000 0.00 0.00 43.17 3.41
8074 9247 0.652592 GAACGAATGCGGACTGGATG 59.347 55.000 0.00 0.00 43.17 3.51
8075 9248 0.744414 AACGAATGCGGACTGGATGG 60.744 55.000 0.00 0.00 43.17 3.51
8076 9249 1.889105 CGAATGCGGACTGGATGGG 60.889 63.158 0.00 0.00 0.00 4.00
8077 9250 1.526887 GAATGCGGACTGGATGGGA 59.473 57.895 0.00 0.00 0.00 4.37
8078 9251 0.109342 GAATGCGGACTGGATGGGAT 59.891 55.000 0.00 0.00 0.00 3.85
8079 9252 0.552848 AATGCGGACTGGATGGGATT 59.447 50.000 0.00 0.00 0.00 3.01
8080 9253 0.109342 ATGCGGACTGGATGGGATTC 59.891 55.000 0.00 0.00 0.00 2.52
8081 9254 0.982852 TGCGGACTGGATGGGATTCT 60.983 55.000 0.00 0.00 0.00 2.40
8082 9255 0.533755 GCGGACTGGATGGGATTCTG 60.534 60.000 0.00 0.00 0.00 3.02
8083 9256 0.833287 CGGACTGGATGGGATTCTGT 59.167 55.000 0.00 0.00 0.00 3.41
8084 9257 2.039418 CGGACTGGATGGGATTCTGTA 58.961 52.381 0.00 0.00 0.00 2.74
8085 9258 2.634940 CGGACTGGATGGGATTCTGTAT 59.365 50.000 0.00 0.00 0.00 2.29
8086 9259 3.306364 CGGACTGGATGGGATTCTGTATC 60.306 52.174 0.00 0.00 0.00 2.24
8087 9260 3.906846 GGACTGGATGGGATTCTGTATCT 59.093 47.826 0.00 0.00 33.53 1.98
8088 9261 4.020662 GGACTGGATGGGATTCTGTATCTC 60.021 50.000 0.00 0.00 34.04 2.75
8097 9270 3.367910 GGATTCTGTATCTCGCTGGGATC 60.368 52.174 0.00 0.00 33.53 3.36
8125 9299 1.674359 TTGTGGATGTGAAGCGTTGT 58.326 45.000 0.00 0.00 0.00 3.32
8126 9300 2.535012 TGTGGATGTGAAGCGTTGTA 57.465 45.000 0.00 0.00 0.00 2.41
8127 9301 2.139917 TGTGGATGTGAAGCGTTGTAC 58.860 47.619 0.00 0.00 0.00 2.90
8128 9302 2.224185 TGTGGATGTGAAGCGTTGTACT 60.224 45.455 0.00 0.00 0.00 2.73
8129 9303 2.157668 GTGGATGTGAAGCGTTGTACTG 59.842 50.000 0.00 0.00 0.00 2.74
8153 9327 6.650807 TGTATCTGACAGAAAACAGAATGTCC 59.349 38.462 9.70 0.00 44.47 4.02
8175 9408 3.652478 GAACCAAAACGCGTCGTAATAG 58.348 45.455 14.44 0.14 39.99 1.73
8180 9413 4.500117 CCAAAACGCGTCGTAATAGTCATA 59.500 41.667 14.44 0.00 39.99 2.15
8189 9422 7.113965 CGCGTCGTAATAGTCATATTAGGTTTT 59.886 37.037 0.00 0.00 39.29 2.43
8267 9501 6.280643 GTTTAAGGTCTGTCTTTTTGCCATT 58.719 36.000 0.00 0.00 0.00 3.16
8269 9503 3.299503 AGGTCTGTCTTTTTGCCATTGT 58.700 40.909 0.00 0.00 0.00 2.71
8270 9504 3.706086 AGGTCTGTCTTTTTGCCATTGTT 59.294 39.130 0.00 0.00 0.00 2.83
8271 9505 4.051237 GGTCTGTCTTTTTGCCATTGTTC 58.949 43.478 0.00 0.00 0.00 3.18
8272 9506 4.051237 GTCTGTCTTTTTGCCATTGTTCC 58.949 43.478 0.00 0.00 0.00 3.62
8273 9507 3.703556 TCTGTCTTTTTGCCATTGTTCCA 59.296 39.130 0.00 0.00 0.00 3.53
8274 9508 4.053295 CTGTCTTTTTGCCATTGTTCCAG 58.947 43.478 0.00 0.00 0.00 3.86
8275 9509 3.450457 TGTCTTTTTGCCATTGTTCCAGT 59.550 39.130 0.00 0.00 0.00 4.00
8276 9510 4.646945 TGTCTTTTTGCCATTGTTCCAGTA 59.353 37.500 0.00 0.00 0.00 2.74
8277 9511 5.221224 TGTCTTTTTGCCATTGTTCCAGTAG 60.221 40.000 0.00 0.00 0.00 2.57
8279 9513 5.596361 TCTTTTTGCCATTGTTCCAGTAGAA 59.404 36.000 0.00 0.00 0.00 2.10
8280 9514 6.267471 TCTTTTTGCCATTGTTCCAGTAGAAT 59.733 34.615 0.00 0.00 36.69 2.40
8281 9515 5.643379 TTTGCCATTGTTCCAGTAGAATC 57.357 39.130 0.00 0.00 36.69 2.52
8282 9516 3.620488 TGCCATTGTTCCAGTAGAATCC 58.380 45.455 0.00 0.00 36.69 3.01
8305 9542 1.326213 TTGTTGCTTGTGGTGTGGGG 61.326 55.000 0.00 0.00 0.00 4.96
8350 9619 5.875359 CCTAGAGCTACAAGTTTAACCAAGG 59.125 44.000 0.00 0.00 0.00 3.61
8357 9626 6.916387 GCTACAAGTTTAACCAAGGAAAGTTC 59.084 38.462 0.00 0.00 0.00 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.109458 CGTGTAGCGCCTAACTGTGA 60.109 55.000 2.29 0.00 0.00 3.58
1 2 1.076533 CCGTGTAGCGCCTAACTGTG 61.077 60.000 2.29 0.00 39.71 3.66
6 7 3.365291 CTGGCCGTGTAGCGCCTAA 62.365 63.158 2.29 0.00 39.71 2.69
21 22 4.969196 ACACAGGTGCGACGCTGG 62.969 66.667 22.08 9.93 0.00 4.85
22 23 3.705638 CACACAGGTGCGACGCTG 61.706 66.667 22.08 13.56 38.37 5.18
23 24 3.226429 ATCACACAGGTGCGACGCT 62.226 57.895 22.08 0.00 44.87 5.07
24 25 2.730672 GATCACACAGGTGCGACGC 61.731 63.158 14.19 14.19 44.87 5.19
25 26 2.094659 GGATCACACAGGTGCGACG 61.095 63.158 0.00 0.00 44.87 5.12
26 27 2.094659 CGGATCACACAGGTGCGAC 61.095 63.158 0.00 0.00 44.87 5.19
27 28 1.811645 TTCGGATCACACAGGTGCGA 61.812 55.000 0.00 0.00 44.87 5.10
28 29 0.948623 TTTCGGATCACACAGGTGCG 60.949 55.000 0.00 0.00 44.87 5.34
29 30 1.234821 TTTTCGGATCACACAGGTGC 58.765 50.000 0.00 0.00 44.87 5.01
30 31 4.695455 AGTAATTTTCGGATCACACAGGTG 59.305 41.667 0.00 0.00 46.66 4.00
31 32 4.906618 AGTAATTTTCGGATCACACAGGT 58.093 39.130 0.00 0.00 0.00 4.00
32 33 6.594159 ACTTAGTAATTTTCGGATCACACAGG 59.406 38.462 0.00 0.00 0.00 4.00
33 34 7.596749 ACTTAGTAATTTTCGGATCACACAG 57.403 36.000 0.00 0.00 0.00 3.66
34 35 7.972832 AACTTAGTAATTTTCGGATCACACA 57.027 32.000 0.00 0.00 0.00 3.72
35 36 9.148104 ACTAACTTAGTAATTTTCGGATCACAC 57.852 33.333 0.00 0.00 37.23 3.82
36 37 9.146984 CACTAACTTAGTAATTTTCGGATCACA 57.853 33.333 0.95 0.00 37.23 3.58
37 38 9.148104 ACACTAACTTAGTAATTTTCGGATCAC 57.852 33.333 0.95 0.00 37.23 3.06
38 39 9.146984 CACACTAACTTAGTAATTTTCGGATCA 57.853 33.333 0.95 0.00 37.23 2.92
39 40 8.114905 GCACACTAACTTAGTAATTTTCGGATC 58.885 37.037 0.95 0.00 37.23 3.36
40 41 7.604927 TGCACACTAACTTAGTAATTTTCGGAT 59.395 33.333 0.95 0.00 37.23 4.18
41 42 6.930164 TGCACACTAACTTAGTAATTTTCGGA 59.070 34.615 0.95 0.00 37.23 4.55
42 43 7.124347 TGCACACTAACTTAGTAATTTTCGG 57.876 36.000 0.95 0.00 37.23 4.30
43 44 6.736853 GCTGCACACTAACTTAGTAATTTTCG 59.263 38.462 0.95 0.00 37.23 3.46
44 45 6.736853 CGCTGCACACTAACTTAGTAATTTTC 59.263 38.462 0.00 0.00 37.23 2.29
45 46 6.599437 CGCTGCACACTAACTTAGTAATTTT 58.401 36.000 0.00 0.00 37.23 1.82
46 47 5.390567 GCGCTGCACACTAACTTAGTAATTT 60.391 40.000 0.00 0.00 37.23 1.82
47 48 4.092968 GCGCTGCACACTAACTTAGTAATT 59.907 41.667 0.00 0.00 37.23 1.40
48 49 3.617263 GCGCTGCACACTAACTTAGTAAT 59.383 43.478 0.00 0.00 37.23 1.89
49 50 2.991190 GCGCTGCACACTAACTTAGTAA 59.009 45.455 0.00 0.00 37.23 2.24
50 51 2.602878 GCGCTGCACACTAACTTAGTA 58.397 47.619 0.00 0.00 37.23 1.82
51 52 1.429463 GCGCTGCACACTAACTTAGT 58.571 50.000 0.00 0.00 40.28 2.24
52 53 0.721718 GGCGCTGCACACTAACTTAG 59.278 55.000 7.64 0.00 0.00 2.18
53 54 0.320374 AGGCGCTGCACACTAACTTA 59.680 50.000 7.64 0.00 0.00 2.24
54 55 1.071471 AGGCGCTGCACACTAACTT 59.929 52.632 7.64 0.00 0.00 2.66
55 56 1.669115 CAGGCGCTGCACACTAACT 60.669 57.895 7.64 0.00 0.00 2.24
56 57 1.630244 CTCAGGCGCTGCACACTAAC 61.630 60.000 7.64 0.00 0.00 2.34
57 58 1.374631 CTCAGGCGCTGCACACTAA 60.375 57.895 7.64 0.00 0.00 2.24
58 59 2.218037 CTCTCAGGCGCTGCACACTA 62.218 60.000 7.64 0.00 0.00 2.74
59 60 3.586461 CTCTCAGGCGCTGCACACT 62.586 63.158 7.64 0.00 0.00 3.55
60 61 3.117171 CTCTCAGGCGCTGCACAC 61.117 66.667 7.64 0.00 0.00 3.82
62 63 3.362399 TAGCTCTCAGGCGCTGCAC 62.362 63.158 7.64 0.00 37.05 4.57
63 64 3.070576 TAGCTCTCAGGCGCTGCA 61.071 61.111 7.64 0.00 37.05 4.41
64 65 2.279385 CTAGCTCTCAGGCGCTGC 60.279 66.667 7.64 2.66 37.05 5.25
65 66 1.065600 GTCTAGCTCTCAGGCGCTG 59.934 63.158 7.64 3.67 37.05 5.18
66 67 2.477176 CGTCTAGCTCTCAGGCGCT 61.477 63.158 7.64 0.00 33.95 5.92
67 68 2.025441 CGTCTAGCTCTCAGGCGC 59.975 66.667 0.00 0.00 33.95 6.53
68 69 2.025441 GCGTCTAGCTCTCAGGCG 59.975 66.667 4.62 4.62 43.80 5.52
74 75 7.889812 ACTATACAGTGTGGCGTCTAGCTCT 62.890 48.000 5.88 0.00 38.81 4.09
75 76 5.749989 ACTATACAGTGTGGCGTCTAGCTC 61.750 50.000 5.88 0.00 38.81 4.09
76 77 3.936031 ACTATACAGTGTGGCGTCTAGCT 60.936 47.826 5.88 0.00 38.81 3.32
77 78 2.358267 ACTATACAGTGTGGCGTCTAGC 59.642 50.000 5.88 0.00 38.32 3.42
78 79 3.953766 CACTATACAGTGTGGCGTCTAG 58.046 50.000 5.88 0.50 46.03 2.43
80 81 2.941453 CACTATACAGTGTGGCGTCT 57.059 50.000 5.88 0.00 46.03 4.18
89 90 2.358267 GCTAGACGCCACACTATACAGT 59.642 50.000 0.00 0.00 34.42 3.55
90 91 2.619177 AGCTAGACGCCACACTATACAG 59.381 50.000 0.00 0.00 40.39 2.74
91 92 2.617308 GAGCTAGACGCCACACTATACA 59.383 50.000 0.00 0.00 40.39 2.29
92 93 2.030981 GGAGCTAGACGCCACACTATAC 60.031 54.545 0.00 0.00 40.39 1.47
93 94 2.228059 GGAGCTAGACGCCACACTATA 58.772 52.381 0.00 0.00 40.39 1.31
94 95 1.033574 GGAGCTAGACGCCACACTAT 58.966 55.000 0.00 0.00 40.39 2.12
95 96 1.035932 GGGAGCTAGACGCCACACTA 61.036 60.000 0.00 0.00 40.69 2.74
96 97 2.352032 GGGAGCTAGACGCCACACT 61.352 63.158 0.00 0.00 40.69 3.55
97 98 2.184579 GGGAGCTAGACGCCACAC 59.815 66.667 0.00 0.00 40.69 3.82
98 99 2.283604 TGGGAGCTAGACGCCACA 60.284 61.111 0.00 0.00 40.69 4.17
99 100 2.496817 CTGGGAGCTAGACGCCAC 59.503 66.667 0.00 0.00 40.69 5.01
100 101 2.759973 CCTGGGAGCTAGACGCCA 60.760 66.667 0.00 0.00 40.69 5.69
101 102 4.228567 GCCTGGGAGCTAGACGCC 62.229 72.222 0.00 0.00 40.39 5.68
102 103 4.577246 CGCCTGGGAGCTAGACGC 62.577 72.222 0.00 0.00 39.57 5.19
103 104 2.711922 AACGCCTGGGAGCTAGACG 61.712 63.158 0.00 0.00 0.00 4.18
104 105 1.153549 CAACGCCTGGGAGCTAGAC 60.154 63.158 0.00 0.00 0.00 2.59
105 106 3.019003 GCAACGCCTGGGAGCTAGA 62.019 63.158 0.00 0.00 0.00 2.43
106 107 2.512515 GCAACGCCTGGGAGCTAG 60.513 66.667 0.00 0.00 0.00 3.42
107 108 3.318384 TGCAACGCCTGGGAGCTA 61.318 61.111 0.00 0.00 0.00 3.32
109 110 3.605749 TAGTGCAACGCCTGGGAGC 62.606 63.158 0.00 0.00 45.86 4.70
110 111 1.448540 CTAGTGCAACGCCTGGGAG 60.449 63.158 0.00 0.00 45.86 4.30
111 112 2.214216 ACTAGTGCAACGCCTGGGA 61.214 57.895 0.00 0.00 45.86 4.37
112 113 2.034879 CACTAGTGCAACGCCTGGG 61.035 63.158 10.54 0.00 45.86 4.45
113 114 3.566261 CACTAGTGCAACGCCTGG 58.434 61.111 10.54 0.00 45.86 4.45
123 124 1.808799 CTCAGGCGCTGCACTAGTG 60.809 63.158 18.93 18.93 39.95 2.74
124 125 1.943116 CTCTCAGGCGCTGCACTAGT 61.943 60.000 7.64 0.00 0.00 2.57
125 126 1.226916 CTCTCAGGCGCTGCACTAG 60.227 63.158 7.64 0.00 0.00 2.57
126 127 2.888111 CTCTCAGGCGCTGCACTA 59.112 61.111 7.64 0.00 0.00 2.74
127 128 4.756458 GCTCTCAGGCGCTGCACT 62.756 66.667 7.64 0.00 0.00 4.40
128 129 3.362399 TAGCTCTCAGGCGCTGCAC 62.362 63.158 7.64 0.00 37.05 4.57
129 130 3.070576 TAGCTCTCAGGCGCTGCA 61.071 61.111 7.64 0.00 37.05 4.41
130 131 2.279385 CTAGCTCTCAGGCGCTGC 60.279 66.667 7.64 2.66 37.05 5.25
131 132 2.416678 CCTAGCTCTCAGGCGCTG 59.583 66.667 7.64 3.67 37.05 5.18
144 145 4.514577 CTGACCCGTGGCGCCTAG 62.515 72.222 29.70 20.71 0.00 3.02
155 156 1.429148 CTATTTCACGCGGCTGACCC 61.429 60.000 12.47 0.00 0.00 4.46
156 157 0.739813 ACTATTTCACGCGGCTGACC 60.740 55.000 12.47 0.00 0.00 4.02
157 158 1.076332 AACTATTTCACGCGGCTGAC 58.924 50.000 12.47 0.00 0.00 3.51
158 159 1.730064 GAAACTATTTCACGCGGCTGA 59.270 47.619 12.47 2.44 39.45 4.26
159 160 1.463056 TGAAACTATTTCACGCGGCTG 59.537 47.619 12.47 0.00 44.21 4.85
160 161 1.803334 TGAAACTATTTCACGCGGCT 58.197 45.000 12.47 0.00 44.21 5.52
167 168 5.361427 TGAACTGTCCGTGAAACTATTTCA 58.639 37.500 0.00 0.00 46.68 2.69
168 169 5.917541 TGAACTGTCCGTGAAACTATTTC 57.082 39.130 0.00 0.00 40.08 2.17
169 170 6.710744 AGAATGAACTGTCCGTGAAACTATTT 59.289 34.615 0.00 0.00 31.75 1.40
170 171 6.147821 CAGAATGAACTGTCCGTGAAACTATT 59.852 38.462 0.00 0.00 39.69 1.73
171 172 5.639506 CAGAATGAACTGTCCGTGAAACTAT 59.360 40.000 0.00 0.00 39.69 2.12
172 173 4.988540 CAGAATGAACTGTCCGTGAAACTA 59.011 41.667 0.00 0.00 39.69 2.24
173 174 3.809832 CAGAATGAACTGTCCGTGAAACT 59.190 43.478 0.00 0.00 39.69 2.66
174 175 3.560068 ACAGAATGAACTGTCCGTGAAAC 59.440 43.478 0.00 0.00 46.36 2.78
175 176 3.804036 ACAGAATGAACTGTCCGTGAAA 58.196 40.909 0.00 0.00 46.36 2.69
176 177 3.469008 ACAGAATGAACTGTCCGTGAA 57.531 42.857 0.00 0.00 46.36 3.18
184 185 7.080099 ACGAAATCAAATCACAGAATGAACTG 58.920 34.615 0.00 0.00 41.93 3.16
185 186 7.206981 ACGAAATCAAATCACAGAATGAACT 57.793 32.000 0.00 0.00 41.93 3.01
186 187 7.858052 AACGAAATCAAATCACAGAATGAAC 57.142 32.000 0.00 0.00 41.93 3.18
191 192 9.226606 ACCTATAAACGAAATCAAATCACAGAA 57.773 29.630 0.00 0.00 0.00 3.02
192 193 8.786826 ACCTATAAACGAAATCAAATCACAGA 57.213 30.769 0.00 0.00 0.00 3.41
193 194 8.664798 TGACCTATAAACGAAATCAAATCACAG 58.335 33.333 0.00 0.00 0.00 3.66
194 195 8.554835 TGACCTATAAACGAAATCAAATCACA 57.445 30.769 0.00 0.00 0.00 3.58
195 196 9.834628 TTTGACCTATAAACGAAATCAAATCAC 57.165 29.630 0.00 0.00 31.51 3.06
201 202 9.834628 GACAAATTTGACCTATAAACGAAATCA 57.165 29.630 24.64 0.00 0.00 2.57
202 203 9.834628 TGACAAATTTGACCTATAAACGAAATC 57.165 29.630 24.64 6.30 0.00 2.17
220 221 3.056304 CGTCCGGCAAATTTGACAAATT 58.944 40.909 23.49 18.41 42.62 1.82
221 222 2.609244 CCGTCCGGCAAATTTGACAAAT 60.609 45.455 23.49 7.62 35.35 2.32
222 223 1.269309 CCGTCCGGCAAATTTGACAAA 60.269 47.619 23.49 7.99 35.35 2.83
223 224 0.312416 CCGTCCGGCAAATTTGACAA 59.688 50.000 23.49 8.36 35.35 3.18
224 225 1.519751 CCCGTCCGGCAAATTTGACA 61.520 55.000 23.49 2.15 35.35 3.58
225 226 1.211709 CCCGTCCGGCAAATTTGAC 59.788 57.895 22.31 18.50 0.00 3.18
226 227 3.674906 CCCGTCCGGCAAATTTGA 58.325 55.556 22.31 0.00 0.00 2.69
237 238 4.487412 CACCGTAGTCGCCCGTCC 62.487 72.222 0.00 0.00 35.54 4.79
255 256 1.738099 CGCAAGAGAAGGACCACCG 60.738 63.158 0.00 0.00 40.12 4.94
271 272 3.250744 TCAGTATCACTTTGCTACACGC 58.749 45.455 0.00 0.00 39.77 5.34
273 274 6.147821 ACAACATCAGTATCACTTTGCTACAC 59.852 38.462 0.00 0.00 0.00 2.90
275 276 6.368791 TGACAACATCAGTATCACTTTGCTAC 59.631 38.462 0.00 0.00 31.91 3.58
290 291 3.084039 GCTGGAATTCCTGACAACATCA 58.916 45.455 29.70 4.79 37.15 3.07
319 320 4.764679 ATTTCAGCGTTGCTAATTCACA 57.235 36.364 0.00 0.00 36.40 3.58
342 343 8.934507 TTTTTGTTTTATGAAACGTCCATCTT 57.065 26.923 8.40 0.00 46.44 2.40
393 394 0.250684 TGTGCTCGGGAATTTCAGCA 60.251 50.000 5.96 5.96 39.58 4.41
840 871 2.439701 AGACGGATCGGAGGCGAA 60.440 61.111 7.35 0.00 0.00 4.70
854 885 2.627737 CGGATCGATCCCCGGAGAC 61.628 68.421 33.51 10.84 44.24 3.36
887 918 2.367894 GGGGGTTATATATAGGCTCGGC 59.632 54.545 0.00 0.00 0.00 5.54
1354 1737 4.629523 GGCCGAACGGGAACACCA 62.630 66.667 15.01 0.00 40.22 4.17
1361 1744 2.450479 AAACAGAGAGGCCGAACGGG 62.450 60.000 15.01 0.00 39.58 5.28
1393 1780 3.703556 CAGGAAGGAGCAGATCAGACTTA 59.296 47.826 0.00 0.00 0.00 2.24
1394 1781 2.500910 CAGGAAGGAGCAGATCAGACTT 59.499 50.000 0.00 0.00 0.00 3.01
1395 1782 2.109774 CAGGAAGGAGCAGATCAGACT 58.890 52.381 0.00 0.00 0.00 3.24
1567 1954 2.514824 GAGGAAGGTGCGGGCATC 60.515 66.667 0.00 0.00 0.00 3.91
1712 2105 2.828877 TGACAACCAGTAACAGGAACG 58.171 47.619 0.00 0.00 0.00 3.95
1719 2112 3.262420 AGCGATCATGACAACCAGTAAC 58.738 45.455 0.00 0.00 0.00 2.50
1749 2142 1.867233 CAGAAGTCACACAACCCGAAG 59.133 52.381 0.00 0.00 0.00 3.79
1810 2203 5.044328 CCCCATCCCATCTTATGATCTCAAT 60.044 44.000 0.00 0.00 0.00 2.57
2087 2480 6.584184 CGAATAGTCAATAGAGGTGCATACAG 59.416 42.308 0.00 0.00 0.00 2.74
2172 2565 3.246226 GCACTGCATAGACTAATCCAACG 59.754 47.826 0.00 0.00 0.00 4.10
2211 2604 2.684881 ACGAAAGCAGGGCTCATTAATG 59.315 45.455 9.29 9.29 38.25 1.90
2283 2676 5.302313 CCAGGAATACACTACCTAGGTCTTC 59.698 48.000 20.32 12.12 32.35 2.87
2308 2701 0.802494 GGCCCATAACGAACACACTG 59.198 55.000 0.00 0.00 0.00 3.66
2636 3033 4.718940 AGTAACTTTGCATGCCCATTAC 57.281 40.909 16.68 16.94 0.00 1.89
2684 3081 4.157840 CCAAAGTAACTTTGCATACCCCTC 59.842 45.833 0.00 0.00 46.44 4.30
2707 3104 5.522824 GGAACGAAGGGAGTATCAAATACAC 59.477 44.000 0.00 0.00 38.21 2.90
2768 3166 2.677836 TCACTCATTTTGCTCCGTATGC 59.322 45.455 0.00 0.00 0.00 3.14
2869 3392 1.656587 ACACAAGGCATCTACTCCCA 58.343 50.000 0.00 0.00 0.00 4.37
3075 3600 7.309194 GCCACCTAGAAGCTTAAATCTTTCAAA 60.309 37.037 0.00 0.00 0.00 2.69
3265 3791 8.492415 AGTAAAGATGGTGTGCCTCTTATATA 57.508 34.615 0.00 0.00 33.89 0.86
3266 3792 7.380423 AGTAAAGATGGTGTGCCTCTTATAT 57.620 36.000 0.00 0.00 33.89 0.86
3357 3989 1.340795 ACAACGTACTCCCTCCGATCT 60.341 52.381 0.00 0.00 0.00 2.75
3373 4005 7.878477 TGCACACTACTACTACAATTACAAC 57.122 36.000 0.00 0.00 0.00 3.32
3423 4055 6.166279 ACCACCATTATGAGAATACATAGCG 58.834 40.000 0.00 0.00 34.80 4.26
3429 4061 7.781548 AACGTAACCACCATTATGAGAATAC 57.218 36.000 0.00 0.00 0.00 1.89
3517 4152 5.008019 CGGCTATTACGAGGTAGAAAGTACA 59.992 44.000 0.00 0.00 0.00 2.90
3580 4215 1.838913 CAAGGCAAAACCAGTGAACG 58.161 50.000 0.00 0.00 43.14 3.95
3642 4277 3.879912 CAGAACTGCAGCCAAAAGG 57.120 52.632 15.27 0.00 0.00 3.11
3730 4379 2.033141 GGAGCAGACAAGCAGGCA 59.967 61.111 0.00 0.00 36.85 4.75
3755 4404 7.365117 CCATATCTCACTATTAGGCCTAAAGGG 60.365 44.444 28.50 24.34 35.18 3.95
3760 4409 7.345653 CCATTCCATATCTCACTATTAGGCCTA 59.654 40.741 8.91 8.91 0.00 3.93
3818 4467 1.895020 TTGCTAGTTCCGCGGGACAT 61.895 55.000 37.02 23.72 0.00 3.06
3820 4469 0.952010 TTTTGCTAGTTCCGCGGGAC 60.952 55.000 29.94 29.94 0.00 4.46
3843 4492 7.231317 AGTGTTAATCTTTCAGCCAGAAATGAA 59.769 33.333 2.78 0.00 44.75 2.57
4031 4680 1.606668 TCAACAGAAAATGCGGGTGAC 59.393 47.619 0.00 0.00 0.00 3.67
4063 4712 6.094048 CAGACATGTTATCACCCTACCAAAAG 59.906 42.308 0.00 0.00 0.00 2.27
4151 4800 1.343506 CGCTGCCAAAAATGAGCTTC 58.656 50.000 0.00 0.00 0.00 3.86
4208 4858 0.179150 GCAAACGCAACACAGTTGGA 60.179 50.000 11.39 0.00 0.00 3.53
4248 4898 6.100404 TGCACATTTTTCTGGCTAATTTCT 57.900 33.333 0.00 0.00 0.00 2.52
4374 5024 3.749226 AGGAAAAGTGCTCTCAAAGAGG 58.251 45.455 6.14 0.00 42.54 3.69
4600 5264 2.052782 AAGACGTTTTTGTGGGCTCT 57.947 45.000 0.00 0.00 0.00 4.09
4778 5518 5.292765 AGTACATGAGGAAATACAGATGCG 58.707 41.667 0.00 0.00 0.00 4.73
4994 5734 5.527951 TGAAAAATGGCTGACACAATGTAC 58.472 37.500 0.00 0.00 0.00 2.90
5217 5958 3.364549 TGAATTTGGATCCCCACACATC 58.635 45.455 9.90 0.00 43.41 3.06
5529 6270 2.159517 GCACTTTTTAGACATCAGGCGG 60.160 50.000 0.00 0.00 0.00 6.13
5747 6488 3.221771 CAAATCACCAACCTCTCCACAA 58.778 45.455 0.00 0.00 0.00 3.33
5765 6506 4.334481 GGAAAGGAAGTTCGAAGTGACAAA 59.666 41.667 6.19 0.00 0.00 2.83
5812 6553 2.224090 TGCATTTTGATTGCAGCACAGT 60.224 40.909 0.00 0.00 44.73 3.55
5979 6720 8.597662 AAAGGCAATATATTGTGATGATTTGC 57.402 30.769 23.14 9.07 39.88 3.68
6098 6840 0.796312 AAGCAAACATACACGAGGCG 59.204 50.000 0.00 0.00 0.00 5.52
6105 6847 5.981088 ACCATGATTCAAGCAAACATACA 57.019 34.783 0.00 0.00 0.00 2.29
6207 6949 5.014202 GGAAATTAAGGCTGAAACCCTACA 58.986 41.667 0.00 0.00 30.93 2.74
6221 6963 5.158494 GCGTTAGTGGTTTGGGAAATTAAG 58.842 41.667 0.00 0.00 0.00 1.85
6222 6964 4.022155 GGCGTTAGTGGTTTGGGAAATTAA 60.022 41.667 0.00 0.00 0.00 1.40
6223 6965 3.506844 GGCGTTAGTGGTTTGGGAAATTA 59.493 43.478 0.00 0.00 0.00 1.40
6224 6966 2.297880 GGCGTTAGTGGTTTGGGAAATT 59.702 45.455 0.00 0.00 0.00 1.82
6225 6967 1.890489 GGCGTTAGTGGTTTGGGAAAT 59.110 47.619 0.00 0.00 0.00 2.17
6226 6968 1.320507 GGCGTTAGTGGTTTGGGAAA 58.679 50.000 0.00 0.00 0.00 3.13
6227 6969 0.183014 TGGCGTTAGTGGTTTGGGAA 59.817 50.000 0.00 0.00 0.00 3.97
6228 6970 0.250553 CTGGCGTTAGTGGTTTGGGA 60.251 55.000 0.00 0.00 0.00 4.37
6229 6971 0.250553 TCTGGCGTTAGTGGTTTGGG 60.251 55.000 0.00 0.00 0.00 4.12
6230 6972 1.535462 CTTCTGGCGTTAGTGGTTTGG 59.465 52.381 0.00 0.00 0.00 3.28
6231 6973 2.218603 ACTTCTGGCGTTAGTGGTTTG 58.781 47.619 0.00 0.00 0.00 2.93
6232 6974 2.616842 CAACTTCTGGCGTTAGTGGTTT 59.383 45.455 0.00 0.00 0.00 3.27
6233 6975 2.218603 CAACTTCTGGCGTTAGTGGTT 58.781 47.619 0.00 0.00 0.00 3.67
6234 6976 1.542547 CCAACTTCTGGCGTTAGTGGT 60.543 52.381 0.00 0.00 38.76 4.16
6235 6977 1.156736 CCAACTTCTGGCGTTAGTGG 58.843 55.000 0.00 0.00 38.76 4.00
6301 7066 2.497675 CCAGCTGTTCTCTGGCTAACTA 59.502 50.000 13.81 0.00 43.88 2.24
6302 7067 1.277557 CCAGCTGTTCTCTGGCTAACT 59.722 52.381 13.81 0.00 43.88 2.24
6461 7587 1.414158 ATGGATCGGTGGGAGTACAG 58.586 55.000 0.00 0.00 0.00 2.74
6492 7618 7.930325 ACACACATCCATATCTAGACAAATCTG 59.070 37.037 0.00 0.00 36.29 2.90
6566 7695 8.679725 ACTCCCTGAGATCCATATTACTACTTA 58.320 37.037 0.00 0.00 33.32 2.24
6584 7713 4.404394 TGTCGCTGATTTAATACTCCCTGA 59.596 41.667 0.00 0.00 0.00 3.86
6585 7714 4.693283 TGTCGCTGATTTAATACTCCCTG 58.307 43.478 0.00 0.00 0.00 4.45
6680 7811 9.052759 CATAACATAATAGAGTACCAACCAACC 57.947 37.037 0.00 0.00 0.00 3.77
6765 7896 6.016024 CCACTTCAGGTTCAAAGAAATGATCA 60.016 38.462 0.00 0.00 0.00 2.92
6901 8032 9.026121 ACGTGTATAGCAATTAGAGATTATCCT 57.974 33.333 0.00 0.00 0.00 3.24
6925 8056 2.226437 ACAGAGCCATTTTTACAGCACG 59.774 45.455 0.00 0.00 0.00 5.34
6977 8108 1.283613 TCCCAAAATACCCTGCATCGT 59.716 47.619 0.00 0.00 0.00 3.73
7063 8194 3.194755 CACCACTACTACTATGCCACACA 59.805 47.826 0.00 0.00 0.00 3.72
7064 8195 3.430374 CCACCACTACTACTATGCCACAC 60.430 52.174 0.00 0.00 0.00 3.82
7105 8236 1.202806 TGAACCTCCAGGCTGAACTTG 60.203 52.381 17.94 0.00 39.32 3.16
7637 8772 0.738389 CGGACAACAGCCAACAACTT 59.262 50.000 0.00 0.00 0.00 2.66
7647 8782 4.056050 AGTAAGTAGCAAACGGACAACAG 58.944 43.478 0.00 0.00 0.00 3.16
7648 8783 3.805422 CAGTAAGTAGCAAACGGACAACA 59.195 43.478 0.00 0.00 0.00 3.33
7649 8784 3.185797 CCAGTAAGTAGCAAACGGACAAC 59.814 47.826 0.00 0.00 0.00 3.32
7650 8785 3.069872 TCCAGTAAGTAGCAAACGGACAA 59.930 43.478 0.00 0.00 0.00 3.18
7652 8787 3.308438 TCCAGTAAGTAGCAAACGGAC 57.692 47.619 0.00 0.00 0.00 4.79
7653 8788 4.202284 ACTTTCCAGTAAGTAGCAAACGGA 60.202 41.667 0.00 0.00 36.62 4.69
7654 8789 4.062991 ACTTTCCAGTAAGTAGCAAACGG 58.937 43.478 0.00 0.00 36.62 4.44
7655 8790 5.440685 CAACTTTCCAGTAAGTAGCAAACG 58.559 41.667 0.00 0.00 37.37 3.60
7666 8801 2.878406 GACTTGCTGCAACTTTCCAGTA 59.122 45.455 11.69 0.00 30.68 2.74
7667 8802 1.678101 GACTTGCTGCAACTTTCCAGT 59.322 47.619 11.69 5.75 33.11 4.00
7782 8955 9.672673 AGTAGAATATTCCACCATAATGCATAC 57.327 33.333 11.92 3.71 0.00 2.39
7784 8957 9.672673 GTAGTAGAATATTCCACCATAATGCAT 57.327 33.333 11.92 0.00 0.00 3.96
7785 8958 8.880244 AGTAGTAGAATATTCCACCATAATGCA 58.120 33.333 11.92 0.00 0.00 3.96
7792 8965 8.647796 CCACAATAGTAGTAGAATATTCCACCA 58.352 37.037 11.92 0.00 0.00 4.17
7793 8966 8.095169 CCCACAATAGTAGTAGAATATTCCACC 58.905 40.741 11.92 0.61 0.00 4.61
7794 8967 7.603024 GCCCACAATAGTAGTAGAATATTCCAC 59.397 40.741 11.92 8.83 0.00 4.02
7795 8968 7.512746 AGCCCACAATAGTAGTAGAATATTCCA 59.487 37.037 11.92 0.00 0.00 3.53
7796 8969 7.819900 CAGCCCACAATAGTAGTAGAATATTCC 59.180 40.741 11.92 0.00 0.00 3.01
7797 8970 8.368668 ACAGCCCACAATAGTAGTAGAATATTC 58.631 37.037 7.41 7.41 0.00 1.75
7798 8971 8.263854 ACAGCCCACAATAGTAGTAGAATATT 57.736 34.615 0.00 0.00 0.00 1.28
7799 8972 7.857404 ACAGCCCACAATAGTAGTAGAATAT 57.143 36.000 0.00 0.00 0.00 1.28
7800 8973 7.201974 GGAACAGCCCACAATAGTAGTAGAATA 60.202 40.741 0.00 0.00 0.00 1.75
7801 8974 6.408206 GGAACAGCCCACAATAGTAGTAGAAT 60.408 42.308 0.00 0.00 0.00 2.40
7802 8975 5.105064 GGAACAGCCCACAATAGTAGTAGAA 60.105 44.000 0.00 0.00 0.00 2.10
7803 8976 4.404715 GGAACAGCCCACAATAGTAGTAGA 59.595 45.833 0.00 0.00 0.00 2.59
7804 8977 4.694339 GGAACAGCCCACAATAGTAGTAG 58.306 47.826 0.00 0.00 0.00 2.57
7805 8978 4.748277 GGAACAGCCCACAATAGTAGTA 57.252 45.455 0.00 0.00 0.00 1.82
7806 8979 3.629142 GGAACAGCCCACAATAGTAGT 57.371 47.619 0.00 0.00 0.00 2.73
7818 8991 4.137543 CAGACTAAATATGGGGAACAGCC 58.862 47.826 0.00 0.00 0.00 4.85
7819 8992 3.565902 GCAGACTAAATATGGGGAACAGC 59.434 47.826 0.00 0.00 0.00 4.40
7820 8993 4.576463 GTGCAGACTAAATATGGGGAACAG 59.424 45.833 0.00 0.00 0.00 3.16
7821 8994 4.018870 TGTGCAGACTAAATATGGGGAACA 60.019 41.667 0.00 0.00 0.00 3.18
7822 8995 4.335594 GTGTGCAGACTAAATATGGGGAAC 59.664 45.833 6.76 0.00 0.00 3.62
7823 8996 4.523083 GTGTGCAGACTAAATATGGGGAA 58.477 43.478 6.76 0.00 0.00 3.97
7824 8997 3.431626 CGTGTGCAGACTAAATATGGGGA 60.432 47.826 12.66 0.00 0.00 4.81
7825 8998 2.872245 CGTGTGCAGACTAAATATGGGG 59.128 50.000 12.66 0.00 0.00 4.96
7826 8999 3.792401 TCGTGTGCAGACTAAATATGGG 58.208 45.455 12.66 0.00 0.00 4.00
7827 9000 3.246226 GCTCGTGTGCAGACTAAATATGG 59.754 47.826 12.66 0.00 0.00 2.74
7828 9001 3.865164 TGCTCGTGTGCAGACTAAATATG 59.135 43.478 12.66 0.00 38.12 1.78
7902 9075 7.176690 CCAGTTTCAGAGGTAACCAATAACATT 59.823 37.037 0.00 0.00 37.17 2.71
7911 9084 2.615747 GGCTCCAGTTTCAGAGGTAACC 60.616 54.545 0.00 0.00 37.17 2.85
7914 9087 2.024176 TGGCTCCAGTTTCAGAGGTA 57.976 50.000 0.00 0.00 0.00 3.08
7917 9090 1.471684 GCATTGGCTCCAGTTTCAGAG 59.528 52.381 0.00 0.00 36.96 3.35
7941 9114 2.152016 ACAAAACGCCTCCTTAGCTTC 58.848 47.619 0.00 0.00 0.00 3.86
7945 9118 2.225727 GTGGAACAAAACGCCTCCTTAG 59.774 50.000 0.00 0.00 44.16 2.18
7946 9119 2.158726 AGTGGAACAAAACGCCTCCTTA 60.159 45.455 0.00 0.00 44.16 2.69
7959 9132 4.448210 GAAAACAGTACCAGAGTGGAACA 58.552 43.478 0.00 0.00 40.96 3.18
7960 9133 3.493503 CGAAAACAGTACCAGAGTGGAAC 59.506 47.826 0.00 0.00 40.96 3.62
7961 9134 3.385433 TCGAAAACAGTACCAGAGTGGAA 59.615 43.478 0.00 0.00 40.96 3.53
7962 9135 2.960384 TCGAAAACAGTACCAGAGTGGA 59.040 45.455 0.00 0.00 40.96 4.02
7963 9136 3.057734 GTCGAAAACAGTACCAGAGTGG 58.942 50.000 0.00 0.00 45.02 4.00
7964 9137 3.978687 AGTCGAAAACAGTACCAGAGTG 58.021 45.455 0.00 0.00 34.31 3.51
7965 9138 4.667519 AAGTCGAAAACAGTACCAGAGT 57.332 40.909 0.00 0.00 0.00 3.24
7966 9139 5.047847 TGAAAGTCGAAAACAGTACCAGAG 58.952 41.667 0.00 0.00 0.00 3.35
7967 9140 5.013568 TGAAAGTCGAAAACAGTACCAGA 57.986 39.130 0.00 0.00 0.00 3.86
7968 9141 5.330271 CTGAAAGTCGAAAACAGTACCAG 57.670 43.478 0.00 0.00 0.00 4.00
7981 9154 4.290920 CGCTTCCCGAAACTGAAAGTCG 62.291 54.545 0.00 0.00 44.22 4.18
7982 9155 1.194772 CGCTTCCCGAAACTGAAAGTC 59.805 52.381 0.00 0.00 44.22 3.01
7983 9156 1.226746 CGCTTCCCGAAACTGAAAGT 58.773 50.000 0.00 0.00 46.49 2.66
7984 9157 0.110192 GCGCTTCCCGAAACTGAAAG 60.110 55.000 0.00 0.00 40.02 2.62
7985 9158 0.534203 AGCGCTTCCCGAAACTGAAA 60.534 50.000 2.64 0.00 40.02 2.69
7986 9159 1.070786 AGCGCTTCCCGAAACTGAA 59.929 52.632 2.64 0.00 40.02 3.02
7987 9160 1.667830 CAGCGCTTCCCGAAACTGA 60.668 57.895 7.50 0.00 40.02 3.41
7988 9161 2.863153 CAGCGCTTCCCGAAACTG 59.137 61.111 7.50 0.00 40.02 3.16
7989 9162 3.050275 GCAGCGCTTCCCGAAACT 61.050 61.111 7.50 0.00 40.02 2.66
7990 9163 2.617274 AAGCAGCGCTTCCCGAAAC 61.617 57.895 7.50 0.00 46.77 2.78
7991 9164 2.281484 AAGCAGCGCTTCCCGAAA 60.281 55.556 7.50 0.00 46.77 3.46
7999 9172 3.539604 AGAAAATATCAGAAGCAGCGCT 58.460 40.909 2.64 2.64 42.56 5.92
8000 9173 3.303659 GGAGAAAATATCAGAAGCAGCGC 60.304 47.826 0.00 0.00 0.00 5.92
8001 9174 4.025061 CAGGAGAAAATATCAGAAGCAGCG 60.025 45.833 0.00 0.00 0.00 5.18
8002 9175 5.121811 TCAGGAGAAAATATCAGAAGCAGC 58.878 41.667 0.00 0.00 0.00 5.25
8003 9176 6.990939 TCATCAGGAGAAAATATCAGAAGCAG 59.009 38.462 0.00 0.00 0.00 4.24
8004 9177 6.892485 TCATCAGGAGAAAATATCAGAAGCA 58.108 36.000 0.00 0.00 0.00 3.91
8005 9178 7.798596 TTCATCAGGAGAAAATATCAGAAGC 57.201 36.000 0.00 0.00 0.00 3.86
8007 9180 9.481340 CGTATTCATCAGGAGAAAATATCAGAA 57.519 33.333 0.00 0.00 0.00 3.02
8008 9181 7.600375 GCGTATTCATCAGGAGAAAATATCAGA 59.400 37.037 0.00 0.00 0.00 3.27
8009 9182 7.411264 CGCGTATTCATCAGGAGAAAATATCAG 60.411 40.741 0.00 0.00 0.00 2.90
8010 9183 6.366061 CGCGTATTCATCAGGAGAAAATATCA 59.634 38.462 0.00 0.00 0.00 2.15
8011 9184 6.366332 ACGCGTATTCATCAGGAGAAAATATC 59.634 38.462 11.67 0.00 0.00 1.63
8012 9185 6.223852 ACGCGTATTCATCAGGAGAAAATAT 58.776 36.000 11.67 0.00 0.00 1.28
8013 9186 5.597806 ACGCGTATTCATCAGGAGAAAATA 58.402 37.500 11.67 0.00 0.00 1.40
8014 9187 4.442706 ACGCGTATTCATCAGGAGAAAAT 58.557 39.130 11.67 0.00 0.00 1.82
8015 9188 3.857052 ACGCGTATTCATCAGGAGAAAA 58.143 40.909 11.67 0.00 0.00 2.29
8016 9189 3.520290 ACGCGTATTCATCAGGAGAAA 57.480 42.857 11.67 0.00 0.00 2.52
8017 9190 3.520290 AACGCGTATTCATCAGGAGAA 57.480 42.857 14.46 0.00 0.00 2.87
8018 9191 3.520290 AAACGCGTATTCATCAGGAGA 57.480 42.857 14.46 0.00 0.00 3.71
8019 9192 3.370978 ACAAAACGCGTATTCATCAGGAG 59.629 43.478 14.46 0.00 0.00 3.69
8020 9193 3.331150 ACAAAACGCGTATTCATCAGGA 58.669 40.909 14.46 0.00 0.00 3.86
8021 9194 3.740044 ACAAAACGCGTATTCATCAGG 57.260 42.857 14.46 0.00 0.00 3.86
8022 9195 4.320690 CCAAACAAAACGCGTATTCATCAG 59.679 41.667 14.46 0.00 0.00 2.90
8023 9196 4.023963 TCCAAACAAAACGCGTATTCATCA 60.024 37.500 14.46 0.00 0.00 3.07
8024 9197 4.468643 TCCAAACAAAACGCGTATTCATC 58.531 39.130 14.46 0.00 0.00 2.92
8025 9198 4.491234 TCCAAACAAAACGCGTATTCAT 57.509 36.364 14.46 0.00 0.00 2.57
8026 9199 3.965292 TCCAAACAAAACGCGTATTCA 57.035 38.095 14.46 0.00 0.00 2.57
8027 9200 3.536837 CGATCCAAACAAAACGCGTATTC 59.463 43.478 14.46 0.00 0.00 1.75
8028 9201 3.484683 CGATCCAAACAAAACGCGTATT 58.515 40.909 14.46 6.51 0.00 1.89
8029 9202 2.159626 CCGATCCAAACAAAACGCGTAT 60.160 45.455 14.46 0.69 0.00 3.06
8030 9203 1.194997 CCGATCCAAACAAAACGCGTA 59.805 47.619 14.46 0.00 0.00 4.42
8031 9204 0.040781 CCGATCCAAACAAAACGCGT 60.041 50.000 5.58 5.58 0.00 6.01
8032 9205 0.727793 CCCGATCCAAACAAAACGCG 60.728 55.000 3.53 3.53 0.00 6.01
8033 9206 1.006825 GCCCGATCCAAACAAAACGC 61.007 55.000 0.00 0.00 0.00 4.84
8034 9207 0.727793 CGCCCGATCCAAACAAAACG 60.728 55.000 0.00 0.00 0.00 3.60
8035 9208 1.006825 GCGCCCGATCCAAACAAAAC 61.007 55.000 0.00 0.00 0.00 2.43
8036 9209 1.287503 GCGCCCGATCCAAACAAAA 59.712 52.632 0.00 0.00 0.00 2.44
8037 9210 2.958576 GCGCCCGATCCAAACAAA 59.041 55.556 0.00 0.00 0.00 2.83
8038 9211 3.427425 CGCGCCCGATCCAAACAA 61.427 61.111 0.00 0.00 36.29 2.83
8039 9212 3.885538 TTCGCGCCCGATCCAAACA 62.886 57.895 0.00 0.00 43.97 2.83
8040 9213 3.122323 TTCGCGCCCGATCCAAAC 61.122 61.111 0.00 0.00 43.97 2.93
8041 9214 3.122323 GTTCGCGCCCGATCCAAA 61.122 61.111 0.00 0.00 43.97 3.28
8045 9218 2.960129 ATTCGTTCGCGCCCGATC 60.960 61.111 18.12 0.00 43.97 3.69
8046 9219 3.261951 CATTCGTTCGCGCCCGAT 61.262 61.111 18.12 8.06 43.97 4.18
8053 9226 2.395690 CAGTCCGCATTCGTTCGC 59.604 61.111 0.00 0.00 0.00 4.70
8054 9227 0.806102 ATCCAGTCCGCATTCGTTCG 60.806 55.000 0.00 0.00 0.00 3.95
8055 9228 0.652592 CATCCAGTCCGCATTCGTTC 59.347 55.000 0.00 0.00 0.00 3.95
8056 9229 0.744414 CCATCCAGTCCGCATTCGTT 60.744 55.000 0.00 0.00 0.00 3.85
8057 9230 1.153369 CCATCCAGTCCGCATTCGT 60.153 57.895 0.00 0.00 0.00 3.85
8058 9231 1.889105 CCCATCCAGTCCGCATTCG 60.889 63.158 0.00 0.00 0.00 3.34
8059 9232 0.109342 ATCCCATCCAGTCCGCATTC 59.891 55.000 0.00 0.00 0.00 2.67
8060 9233 0.552848 AATCCCATCCAGTCCGCATT 59.447 50.000 0.00 0.00 0.00 3.56
8061 9234 0.109342 GAATCCCATCCAGTCCGCAT 59.891 55.000 0.00 0.00 0.00 4.73
8062 9235 0.982852 AGAATCCCATCCAGTCCGCA 60.983 55.000 0.00 0.00 0.00 5.69
8063 9236 0.533755 CAGAATCCCATCCAGTCCGC 60.534 60.000 0.00 0.00 0.00 5.54
8064 9237 0.833287 ACAGAATCCCATCCAGTCCG 59.167 55.000 0.00 0.00 0.00 4.79
8065 9238 3.906846 AGATACAGAATCCCATCCAGTCC 59.093 47.826 0.00 0.00 34.90 3.85
8066 9239 4.321601 CGAGATACAGAATCCCATCCAGTC 60.322 50.000 0.00 0.00 34.90 3.51
8067 9240 3.576118 CGAGATACAGAATCCCATCCAGT 59.424 47.826 0.00 0.00 34.90 4.00
8068 9241 3.616076 GCGAGATACAGAATCCCATCCAG 60.616 52.174 0.00 0.00 34.90 3.86
8069 9242 2.300152 GCGAGATACAGAATCCCATCCA 59.700 50.000 0.00 0.00 34.90 3.41
8070 9243 2.564947 AGCGAGATACAGAATCCCATCC 59.435 50.000 0.00 0.00 34.90 3.51
8071 9244 3.583806 CAGCGAGATACAGAATCCCATC 58.416 50.000 0.00 0.00 34.90 3.51
8072 9245 2.301296 CCAGCGAGATACAGAATCCCAT 59.699 50.000 0.00 0.00 34.90 4.00
8073 9246 1.688735 CCAGCGAGATACAGAATCCCA 59.311 52.381 0.00 0.00 34.90 4.37
8074 9247 1.001406 CCCAGCGAGATACAGAATCCC 59.999 57.143 0.00 0.00 34.90 3.85
8075 9248 1.964223 TCCCAGCGAGATACAGAATCC 59.036 52.381 0.00 0.00 34.90 3.01
8076 9249 3.367910 GGATCCCAGCGAGATACAGAATC 60.368 52.174 0.00 0.00 34.52 2.52
8077 9250 2.564947 GGATCCCAGCGAGATACAGAAT 59.435 50.000 0.00 0.00 0.00 2.40
8078 9251 1.964223 GGATCCCAGCGAGATACAGAA 59.036 52.381 0.00 0.00 0.00 3.02
8079 9252 1.621992 GGATCCCAGCGAGATACAGA 58.378 55.000 0.00 0.00 0.00 3.41
8080 9253 0.242286 CGGATCCCAGCGAGATACAG 59.758 60.000 6.06 0.00 0.00 2.74
8081 9254 0.179001 TCGGATCCCAGCGAGATACA 60.179 55.000 6.06 0.00 0.00 2.29
8082 9255 0.241481 GTCGGATCCCAGCGAGATAC 59.759 60.000 6.06 0.00 0.00 2.24
8083 9256 1.235281 CGTCGGATCCCAGCGAGATA 61.235 60.000 6.06 0.00 0.00 1.98
8084 9257 2.556459 CGTCGGATCCCAGCGAGAT 61.556 63.158 6.06 0.00 0.00 2.75
8085 9258 3.209812 CGTCGGATCCCAGCGAGA 61.210 66.667 6.06 0.00 0.00 4.04
8086 9259 2.558554 AAACGTCGGATCCCAGCGAG 62.559 60.000 19.67 0.54 0.00 5.03
8087 9260 2.162338 AAAACGTCGGATCCCAGCGA 62.162 55.000 19.67 6.05 0.00 4.93
8088 9261 1.296056 AAAAACGTCGGATCCCAGCG 61.296 55.000 6.06 10.70 0.00 5.18
8097 9270 1.600013 TCACATCCACAAAAACGTCGG 59.400 47.619 0.00 0.00 0.00 4.79
8128 9302 6.650807 GGACATTCTGTTTTCTGTCAGATACA 59.349 38.462 2.68 10.18 39.77 2.29
8129 9303 6.183360 CGGACATTCTGTTTTCTGTCAGATAC 60.183 42.308 2.68 6.08 39.77 2.24
8153 9327 0.229247 TTACGACGCGTTTTGGTTCG 59.771 50.000 15.53 13.35 41.54 3.95
8189 9422 6.043127 TGCCATAGCTGATCAGGAGTAAATAA 59.957 38.462 23.89 0.00 40.80 1.40
8198 9431 1.602311 GGTTGCCATAGCTGATCAGG 58.398 55.000 23.89 9.16 40.80 3.86
8267 9501 6.460953 GCAACAAAAAGGATTCTACTGGAACA 60.461 38.462 0.00 0.00 36.70 3.18
8269 9503 5.833131 AGCAACAAAAAGGATTCTACTGGAA 59.167 36.000 0.00 0.00 38.41 3.53
8270 9504 5.385198 AGCAACAAAAAGGATTCTACTGGA 58.615 37.500 0.00 0.00 0.00 3.86
8271 9505 5.712152 AGCAACAAAAAGGATTCTACTGG 57.288 39.130 0.00 0.00 0.00 4.00
8272 9506 6.418819 CACAAGCAACAAAAAGGATTCTACTG 59.581 38.462 0.00 0.00 0.00 2.74
8273 9507 6.461509 CCACAAGCAACAAAAAGGATTCTACT 60.462 38.462 0.00 0.00 0.00 2.57
8274 9508 5.691754 CCACAAGCAACAAAAAGGATTCTAC 59.308 40.000 0.00 0.00 0.00 2.59
8275 9509 5.362430 ACCACAAGCAACAAAAAGGATTCTA 59.638 36.000 0.00 0.00 0.00 2.10
8276 9510 4.162131 ACCACAAGCAACAAAAAGGATTCT 59.838 37.500 0.00 0.00 0.00 2.40
8277 9511 4.270808 CACCACAAGCAACAAAAAGGATTC 59.729 41.667 0.00 0.00 0.00 2.52
8279 9513 3.197549 ACACCACAAGCAACAAAAAGGAT 59.802 39.130 0.00 0.00 0.00 3.24
8280 9514 2.564947 ACACCACAAGCAACAAAAAGGA 59.435 40.909 0.00 0.00 0.00 3.36
8281 9515 2.672381 CACACCACAAGCAACAAAAAGG 59.328 45.455 0.00 0.00 0.00 3.11
8282 9516 2.672381 CCACACCACAAGCAACAAAAAG 59.328 45.455 0.00 0.00 0.00 2.27
8305 9542 1.154197 AAACTTAAACTCGCGGGCTC 58.846 50.000 5.51 0.00 0.00 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.