Multiple sequence alignment - TraesCS7D01G313200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G313200 chr7D 100.000 3592 0 0 1 3592 396984068 396987659 0.000000e+00 6634.0
1 TraesCS7D01G313200 chr7D 81.073 634 96 19 1075 1698 397195589 397196208 5.390000e-133 484.0
2 TraesCS7D01G313200 chr7D 98.013 151 3 0 3441 3591 7943306 7943456 2.750000e-66 263.0
3 TraesCS7D01G313200 chr7D 98.013 151 3 0 3441 3591 495703203 495703053 2.750000e-66 263.0
4 TraesCS7D01G313200 chr7A 91.527 2750 130 37 172 2896 450964920 450967591 0.000000e+00 3692.0
5 TraesCS7D01G313200 chr7A 81.417 635 91 20 1075 1698 452757019 452756401 8.960000e-136 494.0
6 TraesCS7D01G313200 chr7A 92.994 157 10 1 1 156 450964776 450964932 1.000000e-55 228.0
7 TraesCS7D01G313200 chr7A 87.234 94 11 1 2949 3041 450974126 450974219 4.900000e-19 106.0
8 TraesCS7D01G313200 chr7B 93.829 1669 76 12 737 2381 400637229 400638894 0.000000e+00 2486.0
9 TraesCS7D01G313200 chr7B 97.655 469 7 2 2437 2905 400638893 400639357 0.000000e+00 802.0
10 TraesCS7D01G313200 chr7B 89.834 482 33 4 172 653 400636637 400637102 3.970000e-169 604.0
11 TraesCS7D01G313200 chr7B 81.447 636 90 22 1075 1698 400925328 400925947 2.490000e-136 496.0
12 TraesCS7D01G313200 chr7B 97.351 151 4 0 3441 3591 606439453 606439303 1.280000e-64 257.0
13 TraesCS7D01G313200 chr7B 94.872 156 8 0 1 156 400636494 400636649 9.960000e-61 244.0
14 TraesCS7D01G313200 chr7B 87.442 215 18 7 3228 3434 584798773 584798986 4.630000e-59 239.0
15 TraesCS7D01G313200 chr7B 96.923 65 2 0 3036 3100 400639614 400639678 3.790000e-20 110.0
16 TraesCS7D01G313200 chr7B 92.063 63 5 0 2950 3012 400639385 400639447 4.940000e-14 89.8
17 TraesCS7D01G313200 chr5A 98.675 151 2 0 3441 3591 616101829 616101679 5.910000e-68 268.0
18 TraesCS7D01G313200 chr3D 98.013 151 3 0 3441 3591 66882057 66882207 2.750000e-66 263.0
19 TraesCS7D01G313200 chr3D 97.351 151 4 0 3441 3591 91782439 91782289 1.280000e-64 257.0
20 TraesCS7D01G313200 chr3D 87.500 224 16 7 3220 3434 514675356 514675136 7.700000e-62 248.0
21 TraesCS7D01G313200 chr3D 80.226 354 41 14 3104 3435 136768812 136768466 4.630000e-59 239.0
22 TraesCS7D01G313200 chr3D 87.288 118 14 1 3104 3221 136755662 136755546 2.250000e-27 134.0
23 TraesCS7D01G313200 chr1B 98.013 151 3 0 3441 3591 583413485 583413635 2.750000e-66 263.0
24 TraesCS7D01G313200 chr1D 98.013 151 2 1 3441 3591 2214259 2214110 9.890000e-66 261.0
25 TraesCS7D01G313200 chr1D 88.341 223 17 7 3220 3434 382212940 382212719 3.560000e-65 259.0
26 TraesCS7D01G313200 chr2D 97.351 151 4 0 3441 3591 647130783 647130633 1.280000e-64 257.0
27 TraesCS7D01G313200 chr2D 87.054 224 17 7 3220 3434 595549499 595549719 3.580000e-60 243.0
28 TraesCS7D01G313200 chr5B 88.889 207 13 3 3220 3420 650981597 650981395 2.770000e-61 246.0
29 TraesCS7D01G313200 chr5D 87.054 224 17 7 3220 3434 368736323 368736543 3.580000e-60 243.0
30 TraesCS7D01G313200 chr4D 86.878 221 21 4 3220 3433 20409825 20410044 1.290000e-59 241.0
31 TraesCS7D01G313200 chr6D 86.607 224 18 7 3220 3434 433638092 433637872 1.670000e-58 237.0
32 TraesCS7D01G313200 chr2A 86.087 230 21 7 3220 3442 191392070 191392295 1.670000e-58 237.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G313200 chr7D 396984068 396987659 3591 False 6634.000000 6634 100.0000 1 3592 1 chr7D.!!$F2 3591
1 TraesCS7D01G313200 chr7D 397195589 397196208 619 False 484.000000 484 81.0730 1075 1698 1 chr7D.!!$F3 623
2 TraesCS7D01G313200 chr7A 450964776 450967591 2815 False 1960.000000 3692 92.2605 1 2896 2 chr7A.!!$F2 2895
3 TraesCS7D01G313200 chr7A 452756401 452757019 618 True 494.000000 494 81.4170 1075 1698 1 chr7A.!!$R1 623
4 TraesCS7D01G313200 chr7B 400636494 400639678 3184 False 722.633333 2486 94.1960 1 3100 6 chr7B.!!$F3 3099
5 TraesCS7D01G313200 chr7B 400925328 400925947 619 False 496.000000 496 81.4470 1075 1698 1 chr7B.!!$F1 623

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
897 967 0.538746 CCAAAACCCTAACCCGCACT 60.539 55.0 0.0 0.0 0.00 4.40 F
900 970 1.131928 AAACCCTAACCCGCACTCCT 61.132 55.0 0.0 0.0 0.00 3.69 F
1734 1847 0.034059 CCTTAGCCAGGGATACTGCG 59.966 60.0 0.0 0.0 46.14 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1720 1833 0.106708 TCAATCGCAGTATCCCTGGC 59.893 55.0 0.0 0.0 41.81 4.85 R
2237 2364 0.401738 AGTTGCACACACCAGCCTAT 59.598 50.0 0.0 0.0 0.00 2.57 R
2950 3081 0.108585 TCCGCTGACAGGAAGCTTTT 59.891 50.0 0.0 0.0 38.57 2.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
64 66 2.795329 GGTGAAGGGTGACATTGTGAT 58.205 47.619 0.00 0.00 32.27 3.06
65 67 3.618752 CGGTGAAGGGTGACATTGTGATA 60.619 47.826 0.00 0.00 32.27 2.15
100 102 0.653636 TGAAACGCTTTGGTGACGTC 59.346 50.000 9.11 9.11 39.49 4.34
152 154 6.219302 CTGGAAAATGCAGTTGATGTTTTC 57.781 37.500 0.00 5.55 37.80 2.29
153 155 5.916318 TGGAAAATGCAGTTGATGTTTTCT 58.084 33.333 15.33 0.00 38.30 2.52
154 156 7.048629 TGGAAAATGCAGTTGATGTTTTCTA 57.951 32.000 15.33 9.37 38.30 2.10
155 157 7.669427 TGGAAAATGCAGTTGATGTTTTCTAT 58.331 30.769 15.33 0.00 38.30 1.98
156 158 8.149647 TGGAAAATGCAGTTGATGTTTTCTATT 58.850 29.630 15.33 0.00 38.30 1.73
157 159 8.992073 GGAAAATGCAGTTGATGTTTTCTATTT 58.008 29.630 15.33 0.00 38.30 1.40
238 241 1.543429 CCCTCACCAGTGTTTCCTGAC 60.543 57.143 0.00 0.00 34.23 3.51
254 257 2.368875 CCTGACTGAAACCTACACACCT 59.631 50.000 0.00 0.00 0.00 4.00
258 263 2.224305 ACTGAAACCTACACACCTGAGC 60.224 50.000 0.00 0.00 0.00 4.26
285 290 1.226802 CGACTGGATCTGCGTGGAG 60.227 63.158 0.00 0.00 0.00 3.86
308 313 5.998981 AGATTGGCATCTCAGATGAAAGATC 59.001 40.000 19.53 13.87 34.26 2.75
317 322 7.186570 TCTCAGATGAAAGATCACAACCATA 57.813 36.000 0.00 0.00 38.69 2.74
346 351 4.518970 TCCATGCAAACTCTAACAAACTCC 59.481 41.667 0.00 0.00 0.00 3.85
351 356 4.022849 GCAAACTCTAACAAACTCCTGCAT 60.023 41.667 0.00 0.00 0.00 3.96
365 370 2.502947 TCCTGCATAGCTGATGTTCTGT 59.497 45.455 0.00 0.00 37.90 3.41
381 386 5.680619 TGTTCTGTGTTTTCCATGTACTCT 58.319 37.500 0.00 0.00 0.00 3.24
391 396 7.656137 TGTTTTCCATGTACTCTCTCTGTAAAC 59.344 37.037 0.00 0.00 0.00 2.01
394 399 8.645814 TTCCATGTACTCTCTCTGTAAACTAA 57.354 34.615 0.00 0.00 0.00 2.24
395 400 8.824756 TCCATGTACTCTCTCTGTAAACTAAT 57.175 34.615 0.00 0.00 0.00 1.73
438 444 8.506168 TCACAGTTTATGACCATTCTAATTCC 57.494 34.615 0.00 0.00 0.00 3.01
507 513 9.463443 GTCAGTATTTCTAAACTTGCAACAATT 57.537 29.630 0.00 0.00 0.00 2.32
539 545 3.410631 TCTTCCGAGCCACAAATAACA 57.589 42.857 0.00 0.00 0.00 2.41
563 569 6.797995 CAGCGCAAAAGATTTGCAAATAAAAT 59.202 30.769 24.15 9.10 45.14 1.82
613 619 3.787785 TCACACGCGACAATATACCATT 58.212 40.909 15.93 0.00 0.00 3.16
641 647 5.051891 ACTGTGCAAATGAGCTTAATGAC 57.948 39.130 0.00 0.00 34.99 3.06
653 659 4.072131 AGCTTAATGACGCCTGAAAAGAA 58.928 39.130 0.00 0.00 0.00 2.52
654 660 4.154918 AGCTTAATGACGCCTGAAAAGAAG 59.845 41.667 0.00 0.00 0.00 2.85
655 661 4.672801 GCTTAATGACGCCTGAAAAGAAGG 60.673 45.833 0.00 0.00 37.91 3.46
656 662 2.859165 ATGACGCCTGAAAAGAAGGA 57.141 45.000 0.00 0.00 36.91 3.36
657 663 2.859165 TGACGCCTGAAAAGAAGGAT 57.141 45.000 0.00 0.00 36.91 3.24
659 665 3.486383 TGACGCCTGAAAAGAAGGATTT 58.514 40.909 0.00 0.00 36.91 2.17
660 666 4.647611 TGACGCCTGAAAAGAAGGATTTA 58.352 39.130 0.00 0.00 36.91 1.40
661 667 4.695455 TGACGCCTGAAAAGAAGGATTTAG 59.305 41.667 0.00 0.00 36.91 1.85
662 668 4.906618 ACGCCTGAAAAGAAGGATTTAGA 58.093 39.130 0.00 0.00 36.91 2.10
663 669 4.938226 ACGCCTGAAAAGAAGGATTTAGAG 59.062 41.667 0.00 0.00 36.91 2.43
666 672 6.594159 CGCCTGAAAAGAAGGATTTAGAGTAA 59.406 38.462 0.00 0.00 36.91 2.24
667 673 7.119262 CGCCTGAAAAGAAGGATTTAGAGTAAA 59.881 37.037 0.00 0.00 36.91 2.01
668 674 8.961634 GCCTGAAAAGAAGGATTTAGAGTAAAT 58.038 33.333 0.00 0.00 40.84 1.40
756 826 9.765795 TTAGACAAAGAAGAAGAAACTCTAAGG 57.234 33.333 0.00 0.00 0.00 2.69
897 967 0.538746 CCAAAACCCTAACCCGCACT 60.539 55.000 0.00 0.00 0.00 4.40
900 970 1.131928 AAACCCTAACCCGCACTCCT 61.132 55.000 0.00 0.00 0.00 3.69
1059 1138 2.884894 GGTCTCCCGTATCATCGTTT 57.115 50.000 0.00 0.00 0.00 3.60
1073 1152 2.218953 TCGTTTCTTCGCTTCAGTGT 57.781 45.000 0.00 0.00 0.00 3.55
1109 1188 4.664677 GGCTCCGCGACTGTGTGT 62.665 66.667 8.23 0.00 0.00 3.72
1110 1189 3.406361 GCTCCGCGACTGTGTGTG 61.406 66.667 8.23 0.00 0.00 3.82
1211 1311 2.592993 CCCCCTTCGGTTGCTCTCA 61.593 63.158 0.00 0.00 0.00 3.27
1701 1813 5.185249 CCTGGAAGTAGTAAGTTACTCTGCA 59.815 44.000 18.77 14.07 40.14 4.41
1718 1831 5.056553 TCTGCACCTTTACCTTTTACCTT 57.943 39.130 0.00 0.00 0.00 3.50
1719 1832 6.183361 ACTCTGCACCTTTACCTTTTACCTTA 60.183 38.462 0.00 0.00 0.00 2.69
1720 1833 6.235664 TCTGCACCTTTACCTTTTACCTTAG 58.764 40.000 0.00 0.00 0.00 2.18
1721 1834 4.763279 TGCACCTTTACCTTTTACCTTAGC 59.237 41.667 0.00 0.00 0.00 3.09
1722 1835 4.157289 GCACCTTTACCTTTTACCTTAGCC 59.843 45.833 0.00 0.00 0.00 3.93
1723 1836 5.318630 CACCTTTACCTTTTACCTTAGCCA 58.681 41.667 0.00 0.00 0.00 4.75
1734 1847 0.034059 CCTTAGCCAGGGATACTGCG 59.966 60.000 0.00 0.00 46.14 5.18
1735 1848 1.040646 CTTAGCCAGGGATACTGCGA 58.959 55.000 0.00 0.00 46.14 5.10
1736 1849 1.620819 CTTAGCCAGGGATACTGCGAT 59.379 52.381 0.00 0.00 46.14 4.58
1771 1884 2.833794 TGCCAGTGCTAATCGGTTATC 58.166 47.619 0.00 0.00 38.71 1.75
1787 1903 8.828688 ATCGGTTATCTTAGTACCTATTTTGC 57.171 34.615 0.00 0.00 0.00 3.68
1888 2006 4.454728 TGCCATTTTATGTGGAAAGCTC 57.545 40.909 0.00 0.00 39.12 4.09
1904 2022 0.105039 GCTCCCTGTCCTGTTATCCG 59.895 60.000 0.00 0.00 0.00 4.18
1918 2036 9.080915 GTCCTGTTATCCGTTAAAGTAACTAAG 57.919 37.037 0.00 0.00 36.54 2.18
1924 2042 7.689953 ATCCGTTAAAGTAACTAAGTATGCG 57.310 36.000 0.00 0.00 36.54 4.73
1997 2115 7.123697 GCTATCTTGGTTTTTATGGGTTTAGGT 59.876 37.037 0.00 0.00 0.00 3.08
2148 2275 3.581755 GTCCATACAAGAGTACGCAACA 58.418 45.455 0.00 0.00 31.96 3.33
2230 2357 7.743749 TGGTTGTGGTATTAGTTGTTAGGTTA 58.256 34.615 0.00 0.00 0.00 2.85
2237 2364 9.491406 TGGTATTAGTTGTTAGGTTAGGTATGA 57.509 33.333 0.00 0.00 0.00 2.15
2315 2444 9.118300 TGTAATTTTCAAGCATTCCAACAAATT 57.882 25.926 0.00 0.00 0.00 1.82
2350 2481 6.432581 TGGTGTGATACTTCCATACTCTAGT 58.567 40.000 0.00 0.00 0.00 2.57
2375 2506 1.372087 GCAGAAGTGGAGAATGGGCG 61.372 60.000 0.00 0.00 0.00 6.13
2404 2535 9.647797 TTTTAGTTTAACAATCTCTAGCATCGA 57.352 29.630 0.00 0.00 0.00 3.59
2429 2560 8.305441 ACTTTGTTGAACTTTAAAACCTGTTG 57.695 30.769 0.00 0.00 0.00 3.33
2463 2594 1.868469 TCTGTGCTTGCATTTTTGCC 58.132 45.000 0.00 0.00 0.00 4.52
2838 2969 2.354109 TCGTGTTGTCTGATCTGAGC 57.646 50.000 2.02 0.00 0.00 4.26
2905 3036 6.836242 TGACTATATGGTTATTGCACATCCA 58.164 36.000 0.00 0.00 0.00 3.41
2908 3039 1.846007 TGGTTATTGCACATCCACCC 58.154 50.000 0.00 0.00 0.00 4.61
2909 3040 1.076187 TGGTTATTGCACATCCACCCA 59.924 47.619 0.00 0.00 0.00 4.51
2910 3041 1.476488 GGTTATTGCACATCCACCCAC 59.524 52.381 0.00 0.00 0.00 4.61
2911 3042 2.166829 GTTATTGCACATCCACCCACA 58.833 47.619 0.00 0.00 0.00 4.17
2912 3043 2.760092 GTTATTGCACATCCACCCACAT 59.240 45.455 0.00 0.00 0.00 3.21
2913 3044 1.477553 ATTGCACATCCACCCACATC 58.522 50.000 0.00 0.00 0.00 3.06
2914 3045 0.405198 TTGCACATCCACCCACATCT 59.595 50.000 0.00 0.00 0.00 2.90
2915 3046 0.405198 TGCACATCCACCCACATCTT 59.595 50.000 0.00 0.00 0.00 2.40
2916 3047 1.203038 TGCACATCCACCCACATCTTT 60.203 47.619 0.00 0.00 0.00 2.52
2917 3048 1.895131 GCACATCCACCCACATCTTTT 59.105 47.619 0.00 0.00 0.00 2.27
2918 3049 3.088532 GCACATCCACCCACATCTTTTA 58.911 45.455 0.00 0.00 0.00 1.52
2919 3050 3.701040 GCACATCCACCCACATCTTTTAT 59.299 43.478 0.00 0.00 0.00 1.40
2920 3051 4.887071 GCACATCCACCCACATCTTTTATA 59.113 41.667 0.00 0.00 0.00 0.98
2921 3052 5.536161 GCACATCCACCCACATCTTTTATAT 59.464 40.000 0.00 0.00 0.00 0.86
2922 3053 6.294176 GCACATCCACCCACATCTTTTATATC 60.294 42.308 0.00 0.00 0.00 1.63
2923 3054 6.207417 CACATCCACCCACATCTTTTATATCC 59.793 42.308 0.00 0.00 0.00 2.59
2924 3055 6.103205 ACATCCACCCACATCTTTTATATCCT 59.897 38.462 0.00 0.00 0.00 3.24
2925 3056 6.590656 TCCACCCACATCTTTTATATCCTT 57.409 37.500 0.00 0.00 0.00 3.36
2926 3057 7.699709 TCCACCCACATCTTTTATATCCTTA 57.300 36.000 0.00 0.00 0.00 2.69
2927 3058 8.287904 TCCACCCACATCTTTTATATCCTTAT 57.712 34.615 0.00 0.00 0.00 1.73
2928 3059 8.732854 TCCACCCACATCTTTTATATCCTTATT 58.267 33.333 0.00 0.00 0.00 1.40
2929 3060 8.796475 CCACCCACATCTTTTATATCCTTATTG 58.204 37.037 0.00 0.00 0.00 1.90
2930 3061 8.796475 CACCCACATCTTTTATATCCTTATTGG 58.204 37.037 0.00 0.00 37.10 3.16
2931 3062 7.950124 ACCCACATCTTTTATATCCTTATTGGG 59.050 37.037 0.00 0.00 42.71 4.12
2932 3063 8.170061 CCCACATCTTTTATATCCTTATTGGGA 58.830 37.037 0.00 0.00 39.97 4.37
2933 3064 9.759473 CCACATCTTTTATATCCTTATTGGGAT 57.241 33.333 0.00 0.00 46.60 3.85
2996 3137 6.196353 CCAACGTATAATGTGTGCTATTTTGC 59.804 38.462 0.00 0.00 0.00 3.68
2997 3138 6.429791 ACGTATAATGTGTGCTATTTTGCA 57.570 33.333 0.00 0.00 41.05 4.08
2998 3139 6.847400 ACGTATAATGTGTGCTATTTTGCAA 58.153 32.000 0.00 0.00 45.12 4.08
3012 3153 7.286546 TGCTATTTTGCAACCAGCCTAATATAA 59.713 33.333 18.46 0.00 44.83 0.98
3013 3154 7.595130 GCTATTTTGCAACCAGCCTAATATAAC 59.405 37.037 12.84 0.00 44.83 1.89
3014 3155 6.842437 TTTTGCAACCAGCCTAATATAACA 57.158 33.333 0.00 0.00 44.83 2.41
3015 3156 6.842437 TTTGCAACCAGCCTAATATAACAA 57.158 33.333 0.00 0.00 44.83 2.83
3016 3157 7.416964 TTTGCAACCAGCCTAATATAACAAT 57.583 32.000 0.00 0.00 44.83 2.71
3017 3158 7.416964 TTGCAACCAGCCTAATATAACAATT 57.583 32.000 0.00 0.00 44.83 2.32
3018 3159 6.804677 TGCAACCAGCCTAATATAACAATTG 58.195 36.000 3.24 3.24 44.83 2.32
3085 3376 5.181056 TGTTGTGACGATTATGCAGAAACAT 59.819 36.000 0.00 0.00 0.00 2.71
3100 3391 4.574013 CAGAAACATACAGATCTGGCCTTC 59.426 45.833 26.08 18.42 36.50 3.46
3101 3392 3.567478 AACATACAGATCTGGCCTTCC 57.433 47.619 26.08 0.00 34.19 3.46
3102 3393 2.481441 ACATACAGATCTGGCCTTCCA 58.519 47.619 26.08 3.29 40.85 3.53
3111 3402 3.786656 TGGCCTTCCAGATCGATTG 57.213 52.632 3.32 0.00 37.47 2.67
3112 3403 1.203237 TGGCCTTCCAGATCGATTGA 58.797 50.000 3.32 0.00 37.47 2.57
3113 3404 1.139654 TGGCCTTCCAGATCGATTGAG 59.860 52.381 3.32 0.00 37.47 3.02
3114 3405 1.414181 GGCCTTCCAGATCGATTGAGA 59.586 52.381 0.00 0.00 0.00 3.27
3115 3406 2.547642 GGCCTTCCAGATCGATTGAGAG 60.548 54.545 0.00 2.27 0.00 3.20
3116 3407 2.102252 GCCTTCCAGATCGATTGAGAGT 59.898 50.000 0.00 0.00 0.00 3.24
3117 3408 3.319405 GCCTTCCAGATCGATTGAGAGTA 59.681 47.826 0.00 0.00 0.00 2.59
3118 3409 4.021544 GCCTTCCAGATCGATTGAGAGTAT 60.022 45.833 0.00 0.00 0.00 2.12
3119 3410 5.184096 GCCTTCCAGATCGATTGAGAGTATA 59.816 44.000 0.00 0.00 0.00 1.47
3120 3411 6.294787 GCCTTCCAGATCGATTGAGAGTATAA 60.295 42.308 0.00 0.00 0.00 0.98
3121 3412 7.087639 CCTTCCAGATCGATTGAGAGTATAAC 58.912 42.308 0.00 0.00 0.00 1.89
3122 3413 7.040062 CCTTCCAGATCGATTGAGAGTATAACT 60.040 40.741 0.00 0.00 0.00 2.24
3123 3414 7.825331 TCCAGATCGATTGAGAGTATAACTT 57.175 36.000 0.00 0.00 0.00 2.66
3124 3415 8.919777 TCCAGATCGATTGAGAGTATAACTTA 57.080 34.615 0.00 0.00 0.00 2.24
3125 3416 9.350951 TCCAGATCGATTGAGAGTATAACTTAA 57.649 33.333 0.00 0.00 0.00 1.85
3126 3417 9.400638 CCAGATCGATTGAGAGTATAACTTAAC 57.599 37.037 0.00 0.00 0.00 2.01
3136 3427 9.803315 TGAGAGTATAACTTAACTTATGTGCTG 57.197 33.333 0.00 0.00 0.00 4.41
3137 3428 9.250624 GAGAGTATAACTTAACTTATGTGCTGG 57.749 37.037 0.00 0.00 0.00 4.85
3138 3429 8.978472 AGAGTATAACTTAACTTATGTGCTGGA 58.022 33.333 0.00 0.00 0.00 3.86
3139 3430 9.250624 GAGTATAACTTAACTTATGTGCTGGAG 57.749 37.037 0.00 0.00 0.00 3.86
3140 3431 8.978472 AGTATAACTTAACTTATGTGCTGGAGA 58.022 33.333 0.00 0.00 0.00 3.71
3141 3432 9.032420 GTATAACTTAACTTATGTGCTGGAGAC 57.968 37.037 0.00 0.00 0.00 3.36
3142 3433 5.483685 ACTTAACTTATGTGCTGGAGACA 57.516 39.130 0.00 0.00 39.59 3.41
3143 3434 5.238583 ACTTAACTTATGTGCTGGAGACAC 58.761 41.667 0.00 0.00 38.55 3.67
3144 3435 2.370281 ACTTATGTGCTGGAGACACG 57.630 50.000 0.00 0.00 41.03 4.49
3145 3436 1.618837 ACTTATGTGCTGGAGACACGT 59.381 47.619 0.00 0.00 41.03 4.49
3146 3437 1.995484 CTTATGTGCTGGAGACACGTG 59.005 52.381 15.48 15.48 41.03 4.49
3147 3438 1.253100 TATGTGCTGGAGACACGTGA 58.747 50.000 25.01 0.00 41.03 4.35
3148 3439 0.319900 ATGTGCTGGAGACACGTGAC 60.320 55.000 25.01 17.23 41.03 3.67
3149 3440 2.016704 GTGCTGGAGACACGTGACG 61.017 63.158 25.01 2.24 35.60 4.35
3150 3441 2.190841 TGCTGGAGACACGTGACGA 61.191 57.895 25.01 9.33 35.60 4.20
3151 3442 1.213013 GCTGGAGACACGTGACGAT 59.787 57.895 25.01 0.07 35.60 3.73
3152 3443 0.798771 GCTGGAGACACGTGACGATC 60.799 60.000 25.01 9.35 35.60 3.69
3153 3444 0.521735 CTGGAGACACGTGACGATCA 59.478 55.000 25.01 15.13 35.60 2.92
3154 3445 0.955905 TGGAGACACGTGACGATCAA 59.044 50.000 25.01 0.99 33.40 2.57
3155 3446 1.068541 TGGAGACACGTGACGATCAAG 60.069 52.381 25.01 0.00 33.40 3.02
3156 3447 1.199327 GGAGACACGTGACGATCAAGA 59.801 52.381 25.01 0.00 30.40 3.02
3157 3448 2.510874 GAGACACGTGACGATCAAGAG 58.489 52.381 25.01 0.00 30.40 2.85
3158 3449 1.200252 AGACACGTGACGATCAAGAGG 59.800 52.381 25.01 0.00 30.40 3.69
3159 3450 0.243907 ACACGTGACGATCAAGAGGG 59.756 55.000 25.01 0.00 30.40 4.30
3160 3451 0.526211 CACGTGACGATCAAGAGGGA 59.474 55.000 13.70 0.00 30.40 4.20
3161 3452 1.135139 CACGTGACGATCAAGAGGGAT 59.865 52.381 13.70 0.00 30.40 3.85
3162 3453 1.135139 ACGTGACGATCAAGAGGGATG 59.865 52.381 13.70 0.00 30.40 3.51
3163 3454 1.576356 GTGACGATCAAGAGGGATGC 58.424 55.000 0.00 0.00 0.00 3.91
3164 3455 0.465705 TGACGATCAAGAGGGATGCC 59.534 55.000 0.00 0.00 0.00 4.40
3165 3456 0.755686 GACGATCAAGAGGGATGCCT 59.244 55.000 4.97 4.97 0.00 4.75
3166 3457 0.755686 ACGATCAAGAGGGATGCCTC 59.244 55.000 24.94 24.94 37.11 4.70
3167 3458 0.319383 CGATCAAGAGGGATGCCTCG 60.319 60.000 25.71 13.97 41.31 4.63
3168 3459 0.034616 GATCAAGAGGGATGCCTCGG 59.965 60.000 25.71 21.42 41.31 4.63
3169 3460 0.692419 ATCAAGAGGGATGCCTCGGT 60.692 55.000 25.71 16.03 41.31 4.69
3170 3461 0.909610 TCAAGAGGGATGCCTCGGTT 60.910 55.000 25.71 14.07 41.31 4.44
3171 3462 0.462759 CAAGAGGGATGCCTCGGTTC 60.463 60.000 25.71 4.44 41.31 3.62
3172 3463 1.961180 AAGAGGGATGCCTCGGTTCG 61.961 60.000 25.71 0.00 41.31 3.95
3173 3464 2.363795 AGGGATGCCTCGGTTCGA 60.364 61.111 0.00 0.00 0.00 3.71
3182 3473 4.639776 TCGGTTCGAGGAGAGAGG 57.360 61.111 0.00 0.00 0.00 3.69
3183 3474 1.749638 TCGGTTCGAGGAGAGAGGC 60.750 63.158 0.00 0.00 0.00 4.70
3184 3475 2.802106 GGTTCGAGGAGAGAGGCG 59.198 66.667 0.00 0.00 0.00 5.52
3185 3476 2.047443 GGTTCGAGGAGAGAGGCGT 61.047 63.158 0.00 0.00 0.00 5.68
3186 3477 1.430228 GTTCGAGGAGAGAGGCGTC 59.570 63.158 0.00 0.00 0.00 5.19
3187 3478 2.107292 TTCGAGGAGAGAGGCGTCG 61.107 63.158 0.00 0.00 42.86 5.12
3188 3479 3.578272 CGAGGAGAGAGGCGTCGG 61.578 72.222 0.00 0.00 39.25 4.79
3189 3480 2.438795 GAGGAGAGAGGCGTCGGT 60.439 66.667 0.00 0.00 0.00 4.69
3190 3481 2.035940 AGGAGAGAGGCGTCGGTT 59.964 61.111 0.00 0.00 0.00 4.44
3191 3482 2.182030 GGAGAGAGGCGTCGGTTG 59.818 66.667 0.00 0.00 0.00 3.77
3192 3483 2.507324 GAGAGAGGCGTCGGTTGC 60.507 66.667 0.00 0.00 0.00 4.17
3193 3484 4.421479 AGAGAGGCGTCGGTTGCG 62.421 66.667 0.00 0.00 0.00 4.85
3196 3487 4.424566 GAGGCGTCGGTTGCGGTA 62.425 66.667 0.00 0.00 0.00 4.02
3197 3488 4.430765 AGGCGTCGGTTGCGGTAG 62.431 66.667 0.00 0.00 0.00 3.18
3208 3499 2.260434 GCGGTAGCAACCTCACGA 59.740 61.111 0.00 0.00 44.35 4.35
3209 3500 1.153628 GCGGTAGCAACCTCACGAT 60.154 57.895 0.00 0.00 44.35 3.73
3210 3501 1.146358 GCGGTAGCAACCTCACGATC 61.146 60.000 0.00 0.00 44.35 3.69
3211 3502 0.866061 CGGTAGCAACCTCACGATCG 60.866 60.000 14.88 14.88 44.35 3.69
3212 3503 0.172803 GGTAGCAACCTCACGATCGT 59.827 55.000 16.60 16.60 43.08 3.73
3213 3504 1.403780 GGTAGCAACCTCACGATCGTT 60.404 52.381 20.14 0.05 43.08 3.85
3214 3505 1.918609 GTAGCAACCTCACGATCGTTC 59.081 52.381 20.14 2.04 0.00 3.95
3225 3516 1.282817 CGATCGTTCGGGCAATTACA 58.717 50.000 7.03 0.00 41.74 2.41
3226 3517 1.864711 CGATCGTTCGGGCAATTACAT 59.135 47.619 7.03 0.00 41.74 2.29
3227 3518 3.054166 CGATCGTTCGGGCAATTACATA 58.946 45.455 7.03 0.00 41.74 2.29
3228 3519 3.678072 CGATCGTTCGGGCAATTACATAT 59.322 43.478 7.03 0.00 41.74 1.78
3229 3520 4.860352 CGATCGTTCGGGCAATTACATATA 59.140 41.667 7.03 0.00 41.74 0.86
3230 3521 5.004440 CGATCGTTCGGGCAATTACATATAG 59.996 44.000 7.03 0.00 41.74 1.31
3231 3522 5.204409 TCGTTCGGGCAATTACATATAGT 57.796 39.130 0.00 0.00 0.00 2.12
3232 3523 6.330004 TCGTTCGGGCAATTACATATAGTA 57.670 37.500 0.00 0.00 0.00 1.82
3233 3524 6.747125 TCGTTCGGGCAATTACATATAGTAA 58.253 36.000 0.00 0.00 46.10 2.24
3253 3544 7.766736 AGTAATTAATTCTAACACTCCCCCT 57.233 36.000 3.39 0.00 0.00 4.79
3254 3545 8.865244 AGTAATTAATTCTAACACTCCCCCTA 57.135 34.615 3.39 0.00 0.00 3.53
3255 3546 9.287818 AGTAATTAATTCTAACACTCCCCCTAA 57.712 33.333 3.39 0.00 0.00 2.69
3258 3549 8.582891 ATTAATTCTAACACTCCCCCTAATCT 57.417 34.615 0.00 0.00 0.00 2.40
3259 3550 9.684702 ATTAATTCTAACACTCCCCCTAATCTA 57.315 33.333 0.00 0.00 0.00 1.98
3260 3551 6.997942 ATTCTAACACTCCCCCTAATCTAC 57.002 41.667 0.00 0.00 0.00 2.59
3261 3552 5.476950 TCTAACACTCCCCCTAATCTACA 57.523 43.478 0.00 0.00 0.00 2.74
3262 3553 5.206587 TCTAACACTCCCCCTAATCTACAC 58.793 45.833 0.00 0.00 0.00 2.90
3263 3554 3.778622 ACACTCCCCCTAATCTACACT 57.221 47.619 0.00 0.00 0.00 3.55
3264 3555 4.076175 ACACTCCCCCTAATCTACACTT 57.924 45.455 0.00 0.00 0.00 3.16
3265 3556 3.775316 ACACTCCCCCTAATCTACACTTG 59.225 47.826 0.00 0.00 0.00 3.16
3266 3557 4.030913 CACTCCCCCTAATCTACACTTGA 58.969 47.826 0.00 0.00 0.00 3.02
3267 3558 4.031611 ACTCCCCCTAATCTACACTTGAC 58.968 47.826 0.00 0.00 0.00 3.18
3268 3559 3.381335 TCCCCCTAATCTACACTTGACC 58.619 50.000 0.00 0.00 0.00 4.02
3269 3560 3.112263 CCCCCTAATCTACACTTGACCA 58.888 50.000 0.00 0.00 0.00 4.02
3270 3561 3.716872 CCCCCTAATCTACACTTGACCAT 59.283 47.826 0.00 0.00 0.00 3.55
3271 3562 4.905456 CCCCCTAATCTACACTTGACCATA 59.095 45.833 0.00 0.00 0.00 2.74
3272 3563 5.548056 CCCCCTAATCTACACTTGACCATAT 59.452 44.000 0.00 0.00 0.00 1.78
3273 3564 6.729100 CCCCCTAATCTACACTTGACCATATA 59.271 42.308 0.00 0.00 0.00 0.86
3274 3565 7.093289 CCCCCTAATCTACACTTGACCATATAG 60.093 44.444 0.00 0.00 0.00 1.31
3275 3566 7.674348 CCCCTAATCTACACTTGACCATATAGA 59.326 40.741 0.00 0.00 0.00 1.98
3276 3567 8.744652 CCCTAATCTACACTTGACCATATAGAG 58.255 40.741 0.00 0.00 0.00 2.43
3277 3568 9.303116 CCTAATCTACACTTGACCATATAGAGT 57.697 37.037 0.00 0.00 0.00 3.24
3279 3570 8.768501 AATCTACACTTGACCATATAGAGTCA 57.231 34.615 4.01 4.01 41.13 3.41
3280 3571 8.948401 ATCTACACTTGACCATATAGAGTCAT 57.052 34.615 8.09 0.00 42.32 3.06
3281 3572 8.397575 TCTACACTTGACCATATAGAGTCATC 57.602 38.462 8.09 0.00 42.32 2.92
3282 3573 8.221251 TCTACACTTGACCATATAGAGTCATCT 58.779 37.037 8.09 0.00 42.32 2.90
3283 3574 7.667575 ACACTTGACCATATAGAGTCATCTT 57.332 36.000 8.09 0.00 42.32 2.40
3284 3575 7.721402 ACACTTGACCATATAGAGTCATCTTC 58.279 38.462 8.09 0.00 42.32 2.87
3285 3576 7.343057 ACACTTGACCATATAGAGTCATCTTCA 59.657 37.037 8.09 0.00 42.32 3.02
3286 3577 7.651304 CACTTGACCATATAGAGTCATCTTCAC 59.349 40.741 8.09 0.00 42.32 3.18
3287 3578 6.319141 TGACCATATAGAGTCATCTTCACG 57.681 41.667 4.01 0.00 38.07 4.35
3288 3579 6.062095 TGACCATATAGAGTCATCTTCACGA 58.938 40.000 4.01 0.00 38.07 4.35
3289 3580 6.717084 TGACCATATAGAGTCATCTTCACGAT 59.283 38.462 4.01 0.00 38.07 3.73
3290 3581 7.231519 TGACCATATAGAGTCATCTTCACGATT 59.768 37.037 4.01 0.00 38.07 3.34
3291 3582 8.637196 ACCATATAGAGTCATCTTCACGATTA 57.363 34.615 0.00 0.00 36.96 1.75
3292 3583 9.249053 ACCATATAGAGTCATCTTCACGATTAT 57.751 33.333 0.00 0.00 36.96 1.28
3293 3584 9.729023 CCATATAGAGTCATCTTCACGATTATC 57.271 37.037 0.00 0.00 36.96 1.75
3294 3585 9.729023 CATATAGAGTCATCTTCACGATTATCC 57.271 37.037 0.00 0.00 36.96 2.59
3295 3586 5.114785 AGAGTCATCTTCACGATTATCCG 57.885 43.478 0.00 0.00 28.57 4.18
3296 3587 4.022762 AGAGTCATCTTCACGATTATCCGG 60.023 45.833 0.00 0.00 28.57 5.14
3297 3588 3.005897 AGTCATCTTCACGATTATCCGGG 59.994 47.826 0.00 0.00 0.00 5.73
3298 3589 3.005472 GTCATCTTCACGATTATCCGGGA 59.995 47.826 0.00 0.00 40.59 5.14
3302 3593 3.899052 TTCACGATTATCCGGGAAGTT 57.101 42.857 0.00 0.00 45.68 2.66
3303 3594 3.447918 TCACGATTATCCGGGAAGTTC 57.552 47.619 0.00 0.00 39.23 3.01
3304 3595 2.101917 TCACGATTATCCGGGAAGTTCC 59.898 50.000 13.99 13.99 39.23 3.62
3318 3609 4.945246 GGAAGTTCCCTCAAAAAGGTTTC 58.055 43.478 11.17 0.00 44.56 2.78
3319 3610 4.649674 GGAAGTTCCCTCAAAAAGGTTTCT 59.350 41.667 11.17 0.00 44.56 2.52
3320 3611 5.221263 GGAAGTTCCCTCAAAAAGGTTTCTC 60.221 44.000 11.17 0.00 44.56 2.87
3321 3612 4.215908 AGTTCCCTCAAAAAGGTTTCTCC 58.784 43.478 0.00 0.00 44.56 3.71
3332 3623 3.404224 AGGTTTCTCCTCCGAAAGTTC 57.596 47.619 0.00 0.00 44.42 3.01
3333 3624 2.973406 AGGTTTCTCCTCCGAAAGTTCT 59.027 45.455 0.00 0.00 44.42 3.01
3334 3625 3.391626 AGGTTTCTCCTCCGAAAGTTCTT 59.608 43.478 0.00 0.00 44.42 2.52
3335 3626 3.747010 GGTTTCTCCTCCGAAAGTTCTTC 59.253 47.826 0.00 0.00 33.88 2.87
3336 3627 4.377897 GTTTCTCCTCCGAAAGTTCTTCA 58.622 43.478 0.00 0.00 33.88 3.02
3337 3628 4.891992 TTCTCCTCCGAAAGTTCTTCAT 57.108 40.909 0.00 0.00 0.00 2.57
3338 3629 5.995565 TTCTCCTCCGAAAGTTCTTCATA 57.004 39.130 0.00 0.00 0.00 2.15
3339 3630 5.995565 TCTCCTCCGAAAGTTCTTCATAA 57.004 39.130 0.00 0.00 0.00 1.90
3340 3631 5.721232 TCTCCTCCGAAAGTTCTTCATAAC 58.279 41.667 0.00 0.00 0.00 1.89
3341 3632 5.245301 TCTCCTCCGAAAGTTCTTCATAACA 59.755 40.000 0.00 0.00 0.00 2.41
3342 3633 6.049955 TCCTCCGAAAGTTCTTCATAACAT 57.950 37.500 0.00 0.00 0.00 2.71
3343 3634 7.123697 TCTCCTCCGAAAGTTCTTCATAACATA 59.876 37.037 0.00 0.00 0.00 2.29
3344 3635 7.792032 TCCTCCGAAAGTTCTTCATAACATAT 58.208 34.615 0.00 0.00 0.00 1.78
3345 3636 8.265055 TCCTCCGAAAGTTCTTCATAACATATT 58.735 33.333 0.00 0.00 0.00 1.28
3346 3637 8.893727 CCTCCGAAAGTTCTTCATAACATATTT 58.106 33.333 0.00 0.00 0.00 1.40
3347 3638 9.708222 CTCCGAAAGTTCTTCATAACATATTTG 57.292 33.333 0.00 0.00 0.00 2.32
3348 3639 9.443323 TCCGAAAGTTCTTCATAACATATTTGA 57.557 29.630 0.00 0.00 0.00 2.69
3372 3663 9.770097 TGATGAGATCCTGAAATATAAACTCAC 57.230 33.333 0.00 0.00 35.31 3.51
3373 3664 9.770097 GATGAGATCCTGAAATATAAACTCACA 57.230 33.333 0.00 0.00 35.31 3.58
3375 3666 9.958180 TGAGATCCTGAAATATAAACTCACAAA 57.042 29.630 0.00 0.00 0.00 2.83
3377 3668 9.401058 AGATCCTGAAATATAAACTCACAAAGG 57.599 33.333 0.00 0.00 0.00 3.11
3378 3669 7.938140 TCCTGAAATATAAACTCACAAAGGG 57.062 36.000 0.00 0.00 0.00 3.95
3379 3670 7.695055 TCCTGAAATATAAACTCACAAAGGGA 58.305 34.615 0.00 0.00 0.00 4.20
3380 3671 8.336235 TCCTGAAATATAAACTCACAAAGGGAT 58.664 33.333 0.00 0.00 0.00 3.85
3381 3672 9.627123 CCTGAAATATAAACTCACAAAGGGATA 57.373 33.333 0.00 0.00 0.00 2.59
3383 3674 9.120538 TGAAATATAAACTCACAAAGGGATAGC 57.879 33.333 0.00 0.00 0.00 2.97
3384 3675 9.120538 GAAATATAAACTCACAAAGGGATAGCA 57.879 33.333 0.00 0.00 0.00 3.49
3385 3676 9.646522 AAATATAAACTCACAAAGGGATAGCAT 57.353 29.630 0.00 0.00 0.00 3.79
3388 3679 6.759497 AAACTCACAAAGGGATAGCATAAC 57.241 37.500 0.00 0.00 0.00 1.89
3389 3680 4.442706 ACTCACAAAGGGATAGCATAACG 58.557 43.478 0.00 0.00 0.00 3.18
3390 3681 4.081087 ACTCACAAAGGGATAGCATAACGT 60.081 41.667 0.00 0.00 0.00 3.99
3391 3682 4.188462 TCACAAAGGGATAGCATAACGTG 58.812 43.478 0.00 0.00 0.00 4.49
3392 3683 4.081365 TCACAAAGGGATAGCATAACGTGA 60.081 41.667 0.00 0.00 0.00 4.35
3393 3684 4.816385 CACAAAGGGATAGCATAACGTGAT 59.184 41.667 0.00 0.00 0.00 3.06
3394 3685 4.816385 ACAAAGGGATAGCATAACGTGATG 59.184 41.667 8.69 8.69 0.00 3.07
3395 3686 4.689612 AAGGGATAGCATAACGTGATGT 57.310 40.909 14.49 4.28 0.00 3.06
3396 3687 4.258702 AGGGATAGCATAACGTGATGTC 57.741 45.455 14.49 6.95 34.08 3.06
3397 3688 3.898123 AGGGATAGCATAACGTGATGTCT 59.102 43.478 14.49 13.38 35.07 3.41
3398 3689 4.345257 AGGGATAGCATAACGTGATGTCTT 59.655 41.667 14.49 3.75 35.07 3.01
3399 3690 5.057149 GGGATAGCATAACGTGATGTCTTT 58.943 41.667 14.49 7.25 35.07 2.52
3400 3691 6.041637 AGGGATAGCATAACGTGATGTCTTTA 59.958 38.462 14.49 3.48 35.07 1.85
3401 3692 6.704493 GGGATAGCATAACGTGATGTCTTTAA 59.296 38.462 14.49 0.00 35.07 1.52
3402 3693 7.225931 GGGATAGCATAACGTGATGTCTTTAAA 59.774 37.037 14.49 0.00 35.07 1.52
3403 3694 8.062448 GGATAGCATAACGTGATGTCTTTAAAC 58.938 37.037 14.49 0.00 35.07 2.01
3404 3695 6.795098 AGCATAACGTGATGTCTTTAAACA 57.205 33.333 14.49 0.00 0.00 2.83
3405 3696 7.197071 AGCATAACGTGATGTCTTTAAACAA 57.803 32.000 14.49 0.00 31.81 2.83
3406 3697 7.298122 AGCATAACGTGATGTCTTTAAACAAG 58.702 34.615 14.49 0.00 31.81 3.16
3407 3698 7.172532 AGCATAACGTGATGTCTTTAAACAAGA 59.827 33.333 14.49 0.00 31.81 3.02
3408 3699 7.801315 GCATAACGTGATGTCTTTAAACAAGAA 59.199 33.333 14.49 0.00 31.81 2.52
3409 3700 9.825972 CATAACGTGATGTCTTTAAACAAGAAT 57.174 29.630 4.56 0.00 31.81 2.40
3413 3704 9.436957 ACGTGATGTCTTTAAACAAGAATATCT 57.563 29.630 0.00 0.00 31.81 1.98
3414 3705 9.907576 CGTGATGTCTTTAAACAAGAATATCTC 57.092 33.333 9.62 6.76 31.81 2.75
3432 3723 1.944177 TCAAGAAGAGACTCCCCCTG 58.056 55.000 0.00 0.00 0.00 4.45
3433 3724 1.433199 TCAAGAAGAGACTCCCCCTGA 59.567 52.381 0.00 0.00 0.00 3.86
3434 3725 2.045047 TCAAGAAGAGACTCCCCCTGAT 59.955 50.000 0.00 0.00 0.00 2.90
3435 3726 2.843113 CAAGAAGAGACTCCCCCTGATT 59.157 50.000 0.00 0.00 0.00 2.57
3436 3727 2.758130 AGAAGAGACTCCCCCTGATTC 58.242 52.381 0.00 0.00 0.00 2.52
3437 3728 2.317594 AGAAGAGACTCCCCCTGATTCT 59.682 50.000 0.00 0.00 35.83 2.40
3438 3729 2.959421 AGAGACTCCCCCTGATTCTT 57.041 50.000 0.00 0.00 33.48 2.52
3439 3730 2.476199 AGAGACTCCCCCTGATTCTTG 58.524 52.381 0.00 0.00 33.48 3.02
3440 3731 0.915364 AGACTCCCCCTGATTCTTGC 59.085 55.000 0.00 0.00 29.23 4.01
3441 3732 0.620556 GACTCCCCCTGATTCTTGCA 59.379 55.000 0.00 0.00 0.00 4.08
3442 3733 1.213926 GACTCCCCCTGATTCTTGCAT 59.786 52.381 0.00 0.00 0.00 3.96
3443 3734 2.439507 GACTCCCCCTGATTCTTGCATA 59.560 50.000 0.00 0.00 0.00 3.14
3444 3735 3.059097 ACTCCCCCTGATTCTTGCATAT 58.941 45.455 0.00 0.00 0.00 1.78
3445 3736 3.073650 ACTCCCCCTGATTCTTGCATATC 59.926 47.826 0.00 0.00 0.00 1.63
3446 3737 3.330110 CTCCCCCTGATTCTTGCATATCT 59.670 47.826 0.00 0.00 0.00 1.98
3447 3738 3.073503 TCCCCCTGATTCTTGCATATCTG 59.926 47.826 0.00 0.00 0.00 2.90
3448 3739 3.418995 CCCCTGATTCTTGCATATCTGG 58.581 50.000 16.44 16.44 38.74 3.86
3449 3740 3.073503 CCCCTGATTCTTGCATATCTGGA 59.926 47.826 21.30 0.73 40.41 3.86
3450 3741 4.446745 CCCCTGATTCTTGCATATCTGGAA 60.447 45.833 21.30 7.78 40.41 3.53
3451 3742 4.518211 CCCTGATTCTTGCATATCTGGAAC 59.482 45.833 21.30 4.81 40.41 3.62
3452 3743 5.128205 CCTGATTCTTGCATATCTGGAACA 58.872 41.667 17.62 0.00 40.41 3.18
3453 3744 5.768662 CCTGATTCTTGCATATCTGGAACAT 59.231 40.000 17.62 0.00 40.41 2.71
3454 3745 6.938596 CCTGATTCTTGCATATCTGGAACATA 59.061 38.462 17.62 0.00 40.41 2.29
3455 3746 7.119407 CCTGATTCTTGCATATCTGGAACATAG 59.881 40.741 17.62 0.00 40.41 2.23
3456 3747 7.738847 TGATTCTTGCATATCTGGAACATAGA 58.261 34.615 0.00 0.00 38.20 1.98
3457 3748 8.212995 TGATTCTTGCATATCTGGAACATAGAA 58.787 33.333 0.00 0.00 38.20 2.10
3458 3749 8.618702 ATTCTTGCATATCTGGAACATAGAAG 57.381 34.615 0.00 0.00 38.20 2.85
3459 3750 7.129457 TCTTGCATATCTGGAACATAGAAGT 57.871 36.000 0.00 0.00 38.20 3.01
3460 3751 7.568349 TCTTGCATATCTGGAACATAGAAGTT 58.432 34.615 0.00 0.00 38.20 2.66
3461 3752 7.496920 TCTTGCATATCTGGAACATAGAAGTTG 59.503 37.037 0.00 0.00 38.20 3.16
3462 3753 6.057533 TGCATATCTGGAACATAGAAGTTGG 58.942 40.000 0.00 0.00 38.20 3.77
3463 3754 6.058183 GCATATCTGGAACATAGAAGTTGGT 58.942 40.000 0.00 0.00 38.20 3.67
3464 3755 7.147567 TGCATATCTGGAACATAGAAGTTGGTA 60.148 37.037 0.00 0.00 38.20 3.25
3465 3756 7.386299 GCATATCTGGAACATAGAAGTTGGTAG 59.614 40.741 0.00 0.00 38.20 3.18
3466 3757 8.642432 CATATCTGGAACATAGAAGTTGGTAGA 58.358 37.037 0.00 0.00 38.20 2.59
3467 3758 6.531503 TCTGGAACATAGAAGTTGGTAGAG 57.468 41.667 0.00 0.00 38.20 2.43
3468 3759 6.253758 TCTGGAACATAGAAGTTGGTAGAGA 58.746 40.000 0.00 0.00 38.20 3.10
3469 3760 6.153000 TCTGGAACATAGAAGTTGGTAGAGAC 59.847 42.308 0.00 0.00 38.20 3.36
3470 3761 6.628398 CTGGAACATAGAAGTTGGTAGAGACC 60.628 46.154 0.00 0.00 42.33 3.85
3471 3762 8.722177 CTGGAACATAGAAGTTGGTAGAGACCT 61.722 44.444 0.00 0.00 42.43 3.85
3481 3772 3.764237 GGTAGAGACCTGGTGAACAAA 57.236 47.619 2.82 0.00 43.16 2.83
3482 3773 4.287766 GGTAGAGACCTGGTGAACAAAT 57.712 45.455 2.82 0.00 43.16 2.32
3483 3774 4.254492 GGTAGAGACCTGGTGAACAAATC 58.746 47.826 2.82 0.00 43.16 2.17
3484 3775 4.262894 GGTAGAGACCTGGTGAACAAATCA 60.263 45.833 2.82 0.00 43.16 2.57
3485 3776 4.013267 AGAGACCTGGTGAACAAATCAG 57.987 45.455 2.82 0.00 39.19 2.90
3486 3777 3.392616 AGAGACCTGGTGAACAAATCAGT 59.607 43.478 2.82 0.00 39.19 3.41
3487 3778 3.744660 AGACCTGGTGAACAAATCAGTC 58.255 45.455 2.82 0.00 39.19 3.51
3488 3779 2.480419 GACCTGGTGAACAAATCAGTCG 59.520 50.000 2.82 0.00 39.19 4.18
3489 3780 1.197721 CCTGGTGAACAAATCAGTCGC 59.802 52.381 0.00 0.00 39.19 5.19
3490 3781 1.872952 CTGGTGAACAAATCAGTCGCA 59.127 47.619 0.00 0.00 39.19 5.10
3491 3782 2.485426 CTGGTGAACAAATCAGTCGCAT 59.515 45.455 0.00 0.00 39.19 4.73
3492 3783 2.226200 TGGTGAACAAATCAGTCGCATG 59.774 45.455 0.00 0.00 39.19 4.06
3493 3784 2.483877 GGTGAACAAATCAGTCGCATGA 59.516 45.455 0.00 0.00 39.19 3.07
3494 3785 3.127548 GGTGAACAAATCAGTCGCATGAT 59.872 43.478 0.00 0.00 41.72 2.45
3502 3793 4.611310 ATCAGTCGCATGATTTGACTTG 57.389 40.909 0.00 0.10 40.83 3.16
3503 3794 2.160219 TCAGTCGCATGATTTGACTTGC 59.840 45.455 0.00 0.00 40.83 4.01
3504 3795 2.095617 CAGTCGCATGATTTGACTTGCA 60.096 45.455 0.00 0.00 40.83 4.08
3505 3796 2.553602 AGTCGCATGATTTGACTTGCAA 59.446 40.909 0.00 0.00 39.87 4.08
3506 3797 2.912967 GTCGCATGATTTGACTTGCAAG 59.087 45.455 24.84 24.84 39.71 4.01
3507 3798 2.813172 TCGCATGATTTGACTTGCAAGA 59.187 40.909 32.50 10.88 39.71 3.02
3508 3799 3.441222 TCGCATGATTTGACTTGCAAGAT 59.559 39.130 32.50 15.48 39.71 2.40
3509 3800 4.635324 TCGCATGATTTGACTTGCAAGATA 59.365 37.500 32.50 17.21 39.71 1.98
3510 3801 5.297527 TCGCATGATTTGACTTGCAAGATAT 59.702 36.000 32.50 17.81 39.71 1.63
3511 3802 5.398416 CGCATGATTTGACTTGCAAGATATG 59.602 40.000 32.50 21.40 39.71 1.78
3552 3843 8.682710 TGCTTATTATGTAACCTGTTTTCATCC 58.317 33.333 0.00 0.00 0.00 3.51
3553 3844 7.855904 GCTTATTATGTAACCTGTTTTCATCCG 59.144 37.037 0.00 0.00 0.00 4.18
3554 3845 6.693315 ATTATGTAACCTGTTTTCATCCGG 57.307 37.500 0.00 0.00 0.00 5.14
3555 3846 2.785562 TGTAACCTGTTTTCATCCGGG 58.214 47.619 0.00 0.00 0.00 5.73
3556 3847 1.471287 GTAACCTGTTTTCATCCGGGC 59.529 52.381 0.00 0.00 0.00 6.13
3557 3848 0.178975 AACCTGTTTTCATCCGGGCA 60.179 50.000 0.00 0.00 0.00 5.36
3558 3849 0.178975 ACCTGTTTTCATCCGGGCAA 60.179 50.000 0.00 0.00 0.00 4.52
3559 3850 0.243636 CCTGTTTTCATCCGGGCAAC 59.756 55.000 0.00 0.00 0.00 4.17
3560 3851 0.958091 CTGTTTTCATCCGGGCAACA 59.042 50.000 0.00 3.25 39.74 3.33
3561 3852 0.671251 TGTTTTCATCCGGGCAACAC 59.329 50.000 0.00 0.00 39.74 3.32
3562 3853 0.671251 GTTTTCATCCGGGCAACACA 59.329 50.000 0.00 0.00 39.74 3.72
3563 3854 1.067821 GTTTTCATCCGGGCAACACAA 59.932 47.619 0.00 0.00 39.74 3.33
3564 3855 0.958091 TTTCATCCGGGCAACACAAG 59.042 50.000 0.00 0.00 39.74 3.16
3565 3856 0.109532 TTCATCCGGGCAACACAAGA 59.890 50.000 0.00 0.00 39.74 3.02
3566 3857 0.109532 TCATCCGGGCAACACAAGAA 59.890 50.000 0.00 0.00 39.74 2.52
3567 3858 0.958091 CATCCGGGCAACACAAGAAA 59.042 50.000 0.00 0.00 39.74 2.52
3568 3859 0.958822 ATCCGGGCAACACAAGAAAC 59.041 50.000 0.00 0.00 39.74 2.78
3569 3860 0.394488 TCCGGGCAACACAAGAAACA 60.394 50.000 0.00 0.00 39.74 2.83
3570 3861 0.673437 CCGGGCAACACAAGAAACAT 59.327 50.000 0.00 0.00 39.74 2.71
3571 3862 1.068434 CCGGGCAACACAAGAAACATT 59.932 47.619 0.00 0.00 39.74 2.71
3572 3863 2.294791 CCGGGCAACACAAGAAACATTA 59.705 45.455 0.00 0.00 39.74 1.90
3573 3864 3.056891 CCGGGCAACACAAGAAACATTAT 60.057 43.478 0.00 0.00 39.74 1.28
3574 3865 4.165779 CGGGCAACACAAGAAACATTATC 58.834 43.478 0.00 0.00 39.74 1.75
3575 3866 4.165779 GGGCAACACAAGAAACATTATCG 58.834 43.478 0.00 0.00 39.74 2.92
3576 3867 4.320935 GGGCAACACAAGAAACATTATCGT 60.321 41.667 0.00 0.00 39.74 3.73
3577 3868 5.219633 GGCAACACAAGAAACATTATCGTT 58.780 37.500 0.00 0.00 0.00 3.85
3578 3869 5.116983 GGCAACACAAGAAACATTATCGTTG 59.883 40.000 0.00 0.00 35.49 4.10
3579 3870 5.912396 GCAACACAAGAAACATTATCGTTGA 59.088 36.000 0.00 0.00 34.57 3.18
3580 3871 6.086765 GCAACACAAGAAACATTATCGTTGAG 59.913 38.462 0.00 0.00 34.57 3.02
3581 3872 7.351981 CAACACAAGAAACATTATCGTTGAGA 58.648 34.615 0.00 0.00 34.57 3.27
3582 3873 7.672983 ACACAAGAAACATTATCGTTGAGAT 57.327 32.000 0.00 0.00 43.19 2.75
3583 3874 8.771920 ACACAAGAAACATTATCGTTGAGATA 57.228 30.769 0.00 0.00 40.66 1.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
86 88 3.411351 CCCGACGTCACCAAAGCG 61.411 66.667 17.16 0.00 0.00 4.68
100 102 0.669318 TAGAAACTTGAGCGTGCCCG 60.669 55.000 0.00 0.00 37.07 6.13
161 163 3.810310 AGAAAACATCACCCGCAAAAA 57.190 38.095 0.00 0.00 0.00 1.94
162 164 4.279671 ACATAGAAAACATCACCCGCAAAA 59.720 37.500 0.00 0.00 0.00 2.44
163 165 3.823873 ACATAGAAAACATCACCCGCAAA 59.176 39.130 0.00 0.00 0.00 3.68
164 166 3.417101 ACATAGAAAACATCACCCGCAA 58.583 40.909 0.00 0.00 0.00 4.85
165 167 3.066291 ACATAGAAAACATCACCCGCA 57.934 42.857 0.00 0.00 0.00 5.69
166 168 5.353123 TCTTAACATAGAAAACATCACCCGC 59.647 40.000 0.00 0.00 0.00 6.13
167 169 6.978343 TCTTAACATAGAAAACATCACCCG 57.022 37.500 0.00 0.00 0.00 5.28
168 170 7.682021 GCCATCTTAACATAGAAAACATCACCC 60.682 40.741 0.00 0.00 0.00 4.61
169 171 7.067494 AGCCATCTTAACATAGAAAACATCACC 59.933 37.037 0.00 0.00 0.00 4.02
170 172 7.989826 AGCCATCTTAACATAGAAAACATCAC 58.010 34.615 0.00 0.00 0.00 3.06
171 173 9.851686 ATAGCCATCTTAACATAGAAAACATCA 57.148 29.630 0.00 0.00 0.00 3.07
173 175 9.632638 ACATAGCCATCTTAACATAGAAAACAT 57.367 29.630 0.00 0.00 0.00 2.71
174 176 9.461312 AACATAGCCATCTTAACATAGAAAACA 57.539 29.630 0.00 0.00 0.00 2.83
238 241 2.417719 GCTCAGGTGTGTAGGTTTCAG 58.582 52.381 0.00 0.00 0.00 3.02
254 257 0.318699 CCAGTCGTTCTGTTCGCTCA 60.319 55.000 8.83 0.00 42.19 4.26
258 263 2.254459 CAGATCCAGTCGTTCTGTTCG 58.746 52.381 8.83 0.00 42.19 3.95
285 290 5.763698 TGATCTTTCATCTGAGATGCCAATC 59.236 40.000 17.38 15.54 32.96 2.67
297 302 8.489489 AGTATGTATGGTTGTGATCTTTCATCT 58.511 33.333 0.00 0.00 33.56 2.90
308 313 4.198530 TGCATGGAGTATGTATGGTTGTG 58.801 43.478 0.00 0.00 39.08 3.33
317 322 5.804639 TGTTAGAGTTTGCATGGAGTATGT 58.195 37.500 0.00 0.00 39.08 2.29
346 351 3.268330 ACACAGAACATCAGCTATGCAG 58.732 45.455 0.00 0.00 39.39 4.41
351 356 4.713553 TGGAAAACACAGAACATCAGCTA 58.286 39.130 0.00 0.00 0.00 3.32
365 370 5.808366 ACAGAGAGAGTACATGGAAAACA 57.192 39.130 0.00 0.00 0.00 2.83
418 424 7.929785 TCCTACGGAATTAGAATGGTCATAAAC 59.070 37.037 0.00 0.00 0.00 2.01
438 444 7.282675 TCAGTCCTTTTATCTCTTAGTCCTACG 59.717 40.741 0.00 0.00 0.00 3.51
478 484 7.497579 TGTTGCAAGTTTAGAAATACTGACTCA 59.502 33.333 0.00 0.00 0.00 3.41
507 513 2.615493 GCTCGGAAGATGGGAAGACAAA 60.615 50.000 0.00 0.00 40.84 2.83
577 583 1.154338 GTGAGTGTGAGCATTGCGC 60.154 57.895 0.00 0.00 42.91 6.09
579 585 0.110509 CGTGTGAGTGTGAGCATTGC 60.111 55.000 0.00 0.00 0.00 3.56
613 619 4.389890 AGCTCATTTGCACAGTTTTTCA 57.610 36.364 0.00 0.00 34.99 2.69
641 647 4.938226 ACTCTAAATCCTTCTTTTCAGGCG 59.062 41.667 0.00 0.00 0.00 5.52
752 822 1.210967 CCCATTGGACGCCTTACCTTA 59.789 52.381 3.62 0.00 0.00 2.69
756 826 2.119029 GGCCCATTGGACGCCTTAC 61.119 63.158 13.94 0.00 39.70 2.34
1008 1087 3.020237 TTACCCGCGGCTGTGCATA 62.020 57.895 22.85 0.00 34.15 3.14
1056 1135 6.575201 CAGATAAAACACTGAAGCGAAGAAAC 59.425 38.462 0.00 0.00 36.38 2.78
1059 1138 4.690748 CCAGATAAAACACTGAAGCGAAGA 59.309 41.667 0.00 0.00 36.38 2.87
1073 1152 3.118038 AGCCGCCATTAGACCAGATAAAA 60.118 43.478 0.00 0.00 0.00 1.52
1109 1188 0.325296 ACGAGATACCCTTCCTGCCA 60.325 55.000 0.00 0.00 0.00 4.92
1110 1189 0.389757 GACGAGATACCCTTCCTGCC 59.610 60.000 0.00 0.00 0.00 4.85
1211 1311 0.253327 GGAAGAAATCCGCCAGGTCT 59.747 55.000 0.00 0.00 38.79 3.85
1701 1813 5.516062 CCTGGCTAAGGTAAAAGGTAAAGGT 60.516 44.000 0.00 0.00 41.74 3.50
1718 1831 1.344438 CAATCGCAGTATCCCTGGCTA 59.656 52.381 0.00 0.00 41.81 3.93
1719 1832 0.107456 CAATCGCAGTATCCCTGGCT 59.893 55.000 0.00 0.00 41.81 4.75
1720 1833 0.106708 TCAATCGCAGTATCCCTGGC 59.893 55.000 0.00 0.00 41.81 4.85
1721 1834 2.213499 GTTCAATCGCAGTATCCCTGG 58.787 52.381 0.00 0.00 41.81 4.45
1722 1835 1.860950 CGTTCAATCGCAGTATCCCTG 59.139 52.381 0.00 0.00 44.53 4.45
1723 1836 1.480954 ACGTTCAATCGCAGTATCCCT 59.519 47.619 0.00 0.00 0.00 4.20
1725 1838 2.535984 CTCACGTTCAATCGCAGTATCC 59.464 50.000 0.00 0.00 0.00 2.59
1726 1839 3.435566 TCTCACGTTCAATCGCAGTATC 58.564 45.455 0.00 0.00 0.00 2.24
1727 1840 3.503827 TCTCACGTTCAATCGCAGTAT 57.496 42.857 0.00 0.00 0.00 2.12
1728 1841 2.984471 GTTCTCACGTTCAATCGCAGTA 59.016 45.455 0.00 0.00 0.00 2.74
1729 1842 1.792949 GTTCTCACGTTCAATCGCAGT 59.207 47.619 0.00 0.00 0.00 4.40
1730 1843 2.061773 AGTTCTCACGTTCAATCGCAG 58.938 47.619 0.00 0.00 0.00 5.18
1731 1844 2.148916 AGTTCTCACGTTCAATCGCA 57.851 45.000 0.00 0.00 0.00 5.10
1732 1845 2.827555 CAAGTTCTCACGTTCAATCGC 58.172 47.619 0.00 0.00 0.00 4.58
1733 1846 2.411547 GGCAAGTTCTCACGTTCAATCG 60.412 50.000 0.00 0.00 0.00 3.34
1734 1847 2.548057 TGGCAAGTTCTCACGTTCAATC 59.452 45.455 0.00 0.00 0.00 2.67
1735 1848 2.549754 CTGGCAAGTTCTCACGTTCAAT 59.450 45.455 0.00 0.00 0.00 2.57
1736 1849 1.939934 CTGGCAAGTTCTCACGTTCAA 59.060 47.619 0.00 0.00 0.00 2.69
1787 1903 5.661458 AGGACTGAATCAACTGGTATAACG 58.339 41.667 0.00 0.00 0.00 3.18
1792 1908 4.532126 ACATGAGGACTGAATCAACTGGTA 59.468 41.667 0.00 0.00 0.00 3.25
1888 2006 3.899052 TTAACGGATAACAGGACAGGG 57.101 47.619 0.00 0.00 0.00 4.45
1918 2036 2.872245 AGCATCCACATGTTACGCATAC 59.128 45.455 0.00 0.00 35.74 2.39
1924 2042 3.753272 AGAACACAGCATCCACATGTTAC 59.247 43.478 0.00 0.00 33.76 2.50
1997 2115 1.950216 TGAGTGGCATGCGTTTACAAA 59.050 42.857 12.44 0.00 0.00 2.83
2185 2312 9.411189 ACAACCAAGTAAAACTTAAATCCTACA 57.589 29.630 0.00 0.00 36.03 2.74
2230 2357 2.435805 CACACACCAGCCTATCATACCT 59.564 50.000 0.00 0.00 0.00 3.08
2237 2364 0.401738 AGTTGCACACACCAGCCTAT 59.598 50.000 0.00 0.00 0.00 2.57
2315 2444 6.599244 GGAAGTATCACACCAAGATGAAATGA 59.401 38.462 0.00 0.00 0.00 2.57
2350 2481 4.162320 CCCATTCTCCACTTCTGCTACTAA 59.838 45.833 0.00 0.00 0.00 2.24
2402 2533 6.804783 ACAGGTTTTAAAGTTCAACAAAGTCG 59.195 34.615 0.00 0.00 0.00 4.18
2404 2535 8.145122 TCAACAGGTTTTAAAGTTCAACAAAGT 58.855 29.630 0.00 0.00 0.00 2.66
2429 2560 6.471519 GCAAGCACAGATGAATGAATTACTTC 59.528 38.462 0.00 0.00 0.00 3.01
2838 2969 1.992667 TGAAAGCAGCGATTACACTCG 59.007 47.619 0.00 0.00 41.54 4.18
2905 3036 7.950124 CCCAATAAGGATATAAAAGATGTGGGT 59.050 37.037 0.00 0.00 41.22 4.51
2949 3080 1.346395 TCCGCTGACAGGAAGCTTTTA 59.654 47.619 0.00 0.00 38.57 1.52
2950 3081 0.108585 TCCGCTGACAGGAAGCTTTT 59.891 50.000 0.00 0.00 38.57 2.27
2951 3082 0.108585 TTCCGCTGACAGGAAGCTTT 59.891 50.000 0.00 0.00 42.33 3.51
2952 3083 1.754745 TTCCGCTGACAGGAAGCTT 59.245 52.632 0.00 0.00 42.33 3.74
2953 3084 3.471620 TTCCGCTGACAGGAAGCT 58.528 55.556 4.26 0.00 42.33 3.74
2958 3089 2.317609 CGTTGGTTCCGCTGACAGG 61.318 63.158 4.26 0.00 0.00 4.00
3027 3168 7.520453 GCGACCAAAAGATTGCATCTATATTGA 60.520 37.037 14.02 0.00 39.08 2.57
3051 3342 2.324860 TCGTCACAACATTGTCTAGCG 58.675 47.619 0.00 0.00 39.91 4.26
3100 3391 9.400638 GTTAAGTTATACTCTCAATCGATCTGG 57.599 37.037 0.00 0.00 0.00 3.86
3110 3401 9.803315 CAGCACATAAGTTAAGTTATACTCTCA 57.197 33.333 13.91 0.00 0.00 3.27
3111 3402 9.250624 CCAGCACATAAGTTAAGTTATACTCTC 57.749 37.037 13.91 4.39 0.00 3.20
3112 3403 8.978472 TCCAGCACATAAGTTAAGTTATACTCT 58.022 33.333 13.91 8.87 0.00 3.24
3113 3404 9.250624 CTCCAGCACATAAGTTAAGTTATACTC 57.749 37.037 13.91 7.16 0.00 2.59
3114 3405 8.978472 TCTCCAGCACATAAGTTAAGTTATACT 58.022 33.333 13.91 9.77 0.00 2.12
3115 3406 9.032420 GTCTCCAGCACATAAGTTAAGTTATAC 57.968 37.037 13.91 8.02 0.00 1.47
3116 3407 8.755028 TGTCTCCAGCACATAAGTTAAGTTATA 58.245 33.333 13.91 0.00 0.00 0.98
3117 3408 7.549488 GTGTCTCCAGCACATAAGTTAAGTTAT 59.451 37.037 9.37 9.37 36.88 1.89
3118 3409 6.872020 GTGTCTCCAGCACATAAGTTAAGTTA 59.128 38.462 5.24 5.24 36.88 2.24
3119 3410 5.701290 GTGTCTCCAGCACATAAGTTAAGTT 59.299 40.000 0.37 0.37 36.88 2.66
3120 3411 5.238583 GTGTCTCCAGCACATAAGTTAAGT 58.761 41.667 0.00 0.00 36.88 2.24
3121 3412 4.327357 CGTGTCTCCAGCACATAAGTTAAG 59.673 45.833 0.00 0.00 36.71 1.85
3122 3413 4.242475 CGTGTCTCCAGCACATAAGTTAA 58.758 43.478 0.00 0.00 36.71 2.01
3123 3414 3.257375 ACGTGTCTCCAGCACATAAGTTA 59.743 43.478 0.00 0.00 36.71 2.24
3124 3415 2.037251 ACGTGTCTCCAGCACATAAGTT 59.963 45.455 0.00 0.00 36.71 2.66
3125 3416 1.618837 ACGTGTCTCCAGCACATAAGT 59.381 47.619 0.00 0.00 36.71 2.24
3126 3417 1.995484 CACGTGTCTCCAGCACATAAG 59.005 52.381 7.58 0.00 36.71 1.73
3127 3418 1.616374 TCACGTGTCTCCAGCACATAA 59.384 47.619 16.51 0.00 36.71 1.90
3128 3419 1.067846 GTCACGTGTCTCCAGCACATA 60.068 52.381 16.51 0.00 36.71 2.29
3129 3420 0.319900 GTCACGTGTCTCCAGCACAT 60.320 55.000 16.51 0.00 36.71 3.21
3130 3421 1.067416 GTCACGTGTCTCCAGCACA 59.933 57.895 16.51 0.00 36.71 4.57
3131 3422 2.016704 CGTCACGTGTCTCCAGCAC 61.017 63.158 16.51 2.42 0.00 4.40
3132 3423 1.524008 ATCGTCACGTGTCTCCAGCA 61.524 55.000 16.51 0.00 0.00 4.41
3133 3424 0.798771 GATCGTCACGTGTCTCCAGC 60.799 60.000 16.51 0.00 0.00 4.85
3134 3425 0.521735 TGATCGTCACGTGTCTCCAG 59.478 55.000 16.51 2.23 0.00 3.86
3135 3426 0.955905 TTGATCGTCACGTGTCTCCA 59.044 50.000 16.51 5.93 0.00 3.86
3136 3427 1.199327 TCTTGATCGTCACGTGTCTCC 59.801 52.381 16.51 3.34 0.00 3.71
3137 3428 2.510874 CTCTTGATCGTCACGTGTCTC 58.489 52.381 16.51 5.31 0.00 3.36
3138 3429 1.200252 CCTCTTGATCGTCACGTGTCT 59.800 52.381 16.51 0.00 0.00 3.41
3139 3430 1.618861 CCTCTTGATCGTCACGTGTC 58.381 55.000 16.51 9.31 0.00 3.67
3140 3431 0.243907 CCCTCTTGATCGTCACGTGT 59.756 55.000 16.51 0.00 0.00 4.49
3141 3432 0.526211 TCCCTCTTGATCGTCACGTG 59.474 55.000 9.94 9.94 0.00 4.49
3142 3433 1.135139 CATCCCTCTTGATCGTCACGT 59.865 52.381 0.00 0.00 0.00 4.49
3143 3434 1.845266 CATCCCTCTTGATCGTCACG 58.155 55.000 0.00 0.00 0.00 4.35
3144 3435 1.576356 GCATCCCTCTTGATCGTCAC 58.424 55.000 0.00 0.00 0.00 3.67
3145 3436 0.465705 GGCATCCCTCTTGATCGTCA 59.534 55.000 0.00 0.00 0.00 4.35
3146 3437 0.755686 AGGCATCCCTCTTGATCGTC 59.244 55.000 0.00 0.00 36.46 4.20
3147 3438 2.922162 AGGCATCCCTCTTGATCGT 58.078 52.632 0.00 0.00 36.46 3.73
3156 3447 2.363795 TCGAACCGAGGCATCCCT 60.364 61.111 0.00 0.00 46.74 4.20
3165 3456 1.749638 GCCTCTCTCCTCGAACCGA 60.750 63.158 0.00 0.00 0.00 4.69
3166 3457 2.802106 GCCTCTCTCCTCGAACCG 59.198 66.667 0.00 0.00 0.00 4.44
3167 3458 1.995646 GACGCCTCTCTCCTCGAACC 61.996 65.000 0.00 0.00 0.00 3.62
3168 3459 1.430228 GACGCCTCTCTCCTCGAAC 59.570 63.158 0.00 0.00 0.00 3.95
3169 3460 2.107292 CGACGCCTCTCTCCTCGAA 61.107 63.158 0.00 0.00 0.00 3.71
3170 3461 2.511829 CGACGCCTCTCTCCTCGA 60.512 66.667 0.00 0.00 0.00 4.04
3171 3462 3.578272 CCGACGCCTCTCTCCTCG 61.578 72.222 0.00 0.00 0.00 4.63
3172 3463 2.047443 AACCGACGCCTCTCTCCTC 61.047 63.158 0.00 0.00 0.00 3.71
3173 3464 2.035940 AACCGACGCCTCTCTCCT 59.964 61.111 0.00 0.00 0.00 3.69
3174 3465 2.182030 CAACCGACGCCTCTCTCC 59.818 66.667 0.00 0.00 0.00 3.71
3175 3466 2.507324 GCAACCGACGCCTCTCTC 60.507 66.667 0.00 0.00 0.00 3.20
3176 3467 4.421479 CGCAACCGACGCCTCTCT 62.421 66.667 0.00 0.00 36.29 3.10
3179 3470 4.424566 TACCGCAACCGACGCCTC 62.425 66.667 0.00 0.00 36.29 4.70
3180 3471 4.430765 CTACCGCAACCGACGCCT 62.431 66.667 0.00 0.00 36.29 5.52
3193 3484 0.172803 ACGATCGTGAGGTTGCTACC 59.827 55.000 22.06 9.54 45.39 3.18
3194 3485 1.918609 GAACGATCGTGAGGTTGCTAC 59.081 52.381 23.51 0.25 0.00 3.58
3195 3486 1.466866 CGAACGATCGTGAGGTTGCTA 60.467 52.381 23.51 0.00 44.06 3.49
3196 3487 0.732880 CGAACGATCGTGAGGTTGCT 60.733 55.000 23.51 2.45 44.06 3.91
3197 3488 1.702299 CGAACGATCGTGAGGTTGC 59.298 57.895 23.51 4.75 44.06 4.17
3207 3498 5.867716 ACTATATGTAATTGCCCGAACGATC 59.132 40.000 0.00 0.00 0.00 3.69
3208 3499 5.790593 ACTATATGTAATTGCCCGAACGAT 58.209 37.500 0.00 0.00 0.00 3.73
3209 3500 5.204409 ACTATATGTAATTGCCCGAACGA 57.796 39.130 0.00 0.00 0.00 3.85
3210 3501 7.591006 ATTACTATATGTAATTGCCCGAACG 57.409 36.000 0.00 0.00 46.40 3.95
3227 3518 9.461734 AGGGGGAGTGTTAGAATTAATTACTAT 57.538 33.333 0.00 0.00 0.00 2.12
3228 3519 8.865244 AGGGGGAGTGTTAGAATTAATTACTA 57.135 34.615 0.00 2.52 0.00 1.82
3229 3520 7.766736 AGGGGGAGTGTTAGAATTAATTACT 57.233 36.000 0.00 0.37 0.00 2.24
3232 3523 9.015146 AGATTAGGGGGAGTGTTAGAATTAATT 57.985 33.333 0.00 0.00 0.00 1.40
3233 3524 8.582891 AGATTAGGGGGAGTGTTAGAATTAAT 57.417 34.615 0.00 0.00 0.00 1.40
3234 3525 8.931568 GTAGATTAGGGGGAGTGTTAGAATTAA 58.068 37.037 0.00 0.00 0.00 1.40
3235 3526 8.069356 TGTAGATTAGGGGGAGTGTTAGAATTA 58.931 37.037 0.00 0.00 0.00 1.40
3236 3527 6.906901 TGTAGATTAGGGGGAGTGTTAGAATT 59.093 38.462 0.00 0.00 0.00 2.17
3237 3528 6.326843 GTGTAGATTAGGGGGAGTGTTAGAAT 59.673 42.308 0.00 0.00 0.00 2.40
3238 3529 5.659971 GTGTAGATTAGGGGGAGTGTTAGAA 59.340 44.000 0.00 0.00 0.00 2.10
3239 3530 5.043582 AGTGTAGATTAGGGGGAGTGTTAGA 60.044 44.000 0.00 0.00 0.00 2.10
3240 3531 5.209659 AGTGTAGATTAGGGGGAGTGTTAG 58.790 45.833 0.00 0.00 0.00 2.34
3241 3532 5.216665 AGTGTAGATTAGGGGGAGTGTTA 57.783 43.478 0.00 0.00 0.00 2.41
3242 3533 4.076175 AGTGTAGATTAGGGGGAGTGTT 57.924 45.455 0.00 0.00 0.00 3.32
3243 3534 3.775316 CAAGTGTAGATTAGGGGGAGTGT 59.225 47.826 0.00 0.00 0.00 3.55
3244 3535 4.030913 TCAAGTGTAGATTAGGGGGAGTG 58.969 47.826 0.00 0.00 0.00 3.51
3245 3536 4.031611 GTCAAGTGTAGATTAGGGGGAGT 58.968 47.826 0.00 0.00 0.00 3.85
3246 3537 3.388350 GGTCAAGTGTAGATTAGGGGGAG 59.612 52.174 0.00 0.00 0.00 4.30
3247 3538 3.246203 TGGTCAAGTGTAGATTAGGGGGA 60.246 47.826 0.00 0.00 0.00 4.81
3248 3539 3.112263 TGGTCAAGTGTAGATTAGGGGG 58.888 50.000 0.00 0.00 0.00 5.40
3249 3540 6.688073 ATATGGTCAAGTGTAGATTAGGGG 57.312 41.667 0.00 0.00 0.00 4.79
3250 3541 8.651589 TCTATATGGTCAAGTGTAGATTAGGG 57.348 38.462 0.00 0.00 0.00 3.53
3251 3542 9.303116 ACTCTATATGGTCAAGTGTAGATTAGG 57.697 37.037 0.00 0.00 0.00 2.69
3253 3544 9.862149 TGACTCTATATGGTCAAGTGTAGATTA 57.138 33.333 5.72 0.00 39.16 1.75
3254 3545 8.768501 TGACTCTATATGGTCAAGTGTAGATT 57.231 34.615 5.72 0.00 39.16 2.40
3255 3546 8.948401 ATGACTCTATATGGTCAAGTGTAGAT 57.052 34.615 10.55 0.00 44.10 1.98
3256 3547 8.221251 AGATGACTCTATATGGTCAAGTGTAGA 58.779 37.037 10.55 0.00 44.10 2.59
3257 3548 8.402798 AGATGACTCTATATGGTCAAGTGTAG 57.597 38.462 10.55 0.00 44.10 2.74
3258 3549 8.768501 AAGATGACTCTATATGGTCAAGTGTA 57.231 34.615 10.55 0.00 44.10 2.90
3259 3550 7.343057 TGAAGATGACTCTATATGGTCAAGTGT 59.657 37.037 10.55 0.00 44.10 3.55
3260 3551 7.651304 GTGAAGATGACTCTATATGGTCAAGTG 59.349 40.741 10.55 0.00 44.10 3.16
3261 3552 7.469318 CGTGAAGATGACTCTATATGGTCAAGT 60.469 40.741 10.55 0.00 44.10 3.16
3262 3553 6.860539 CGTGAAGATGACTCTATATGGTCAAG 59.139 42.308 10.55 0.00 44.10 3.02
3263 3554 6.546034 TCGTGAAGATGACTCTATATGGTCAA 59.454 38.462 10.55 0.00 44.10 3.18
3264 3555 6.062095 TCGTGAAGATGACTCTATATGGTCA 58.938 40.000 9.38 9.38 44.84 4.02
3265 3556 6.561737 TCGTGAAGATGACTCTATATGGTC 57.438 41.667 0.00 0.00 0.00 4.02
3266 3557 7.531857 AATCGTGAAGATGACTCTATATGGT 57.468 36.000 0.00 0.00 40.02 3.55
3267 3558 9.729023 GATAATCGTGAAGATGACTCTATATGG 57.271 37.037 0.00 0.00 40.02 2.74
3268 3559 9.729023 GGATAATCGTGAAGATGACTCTATATG 57.271 37.037 0.00 0.00 40.02 1.78
3269 3560 8.616942 CGGATAATCGTGAAGATGACTCTATAT 58.383 37.037 0.00 0.00 40.02 0.86
3270 3561 7.065923 CCGGATAATCGTGAAGATGACTCTATA 59.934 40.741 0.00 0.00 40.02 1.31
3271 3562 6.127869 CCGGATAATCGTGAAGATGACTCTAT 60.128 42.308 0.00 0.00 40.02 1.98
3272 3563 5.181433 CCGGATAATCGTGAAGATGACTCTA 59.819 44.000 0.00 0.00 40.02 2.43
3273 3564 4.022762 CCGGATAATCGTGAAGATGACTCT 60.023 45.833 0.00 0.00 40.02 3.24
3274 3565 4.230657 CCGGATAATCGTGAAGATGACTC 58.769 47.826 0.00 0.00 40.02 3.36
3275 3566 3.005897 CCCGGATAATCGTGAAGATGACT 59.994 47.826 0.73 0.00 40.02 3.41
3276 3567 3.005472 TCCCGGATAATCGTGAAGATGAC 59.995 47.826 0.73 0.00 40.02 3.06
3277 3568 3.227614 TCCCGGATAATCGTGAAGATGA 58.772 45.455 0.73 0.00 40.02 2.92
3278 3569 3.660501 TCCCGGATAATCGTGAAGATG 57.339 47.619 0.73 0.00 40.02 2.90
3279 3570 3.641906 ACTTCCCGGATAATCGTGAAGAT 59.358 43.478 16.54 2.47 43.69 2.40
3280 3571 3.028850 ACTTCCCGGATAATCGTGAAGA 58.971 45.455 16.54 0.00 43.69 2.87
3281 3572 3.454371 ACTTCCCGGATAATCGTGAAG 57.546 47.619 0.73 7.18 45.42 3.02
3282 3573 3.431207 GGAACTTCCCGGATAATCGTGAA 60.431 47.826 0.73 0.00 0.00 3.18
3283 3574 2.101917 GGAACTTCCCGGATAATCGTGA 59.898 50.000 0.73 0.00 0.00 4.35
3284 3575 2.480845 GGAACTTCCCGGATAATCGTG 58.519 52.381 0.73 0.00 0.00 4.35
3285 3576 2.904697 GGAACTTCCCGGATAATCGT 57.095 50.000 0.73 0.00 0.00 3.73
3313 3604 3.404224 AGAACTTTCGGAGGAGAAACC 57.596 47.619 0.00 0.00 35.44 3.27
3314 3605 4.377897 TGAAGAACTTTCGGAGGAGAAAC 58.622 43.478 0.00 0.00 35.44 2.78
3315 3606 4.682778 TGAAGAACTTTCGGAGGAGAAA 57.317 40.909 0.00 0.00 37.74 2.52
3316 3607 4.891992 ATGAAGAACTTTCGGAGGAGAA 57.108 40.909 0.00 0.00 0.00 2.87
3317 3608 5.245301 TGTTATGAAGAACTTTCGGAGGAGA 59.755 40.000 0.00 0.00 0.00 3.71
3318 3609 5.479306 TGTTATGAAGAACTTTCGGAGGAG 58.521 41.667 0.00 0.00 0.00 3.69
3319 3610 5.477607 TGTTATGAAGAACTTTCGGAGGA 57.522 39.130 0.00 0.00 0.00 3.71
3320 3611 8.438676 AATATGTTATGAAGAACTTTCGGAGG 57.561 34.615 0.00 0.00 0.00 4.30
3321 3612 9.708222 CAAATATGTTATGAAGAACTTTCGGAG 57.292 33.333 0.00 0.00 0.00 4.63
3322 3613 9.443323 TCAAATATGTTATGAAGAACTTTCGGA 57.557 29.630 0.00 0.00 0.00 4.55
3346 3637 9.770097 GTGAGTTTATATTTCAGGATCTCATCA 57.230 33.333 0.00 0.00 33.22 3.07
3347 3638 9.770097 TGTGAGTTTATATTTCAGGATCTCATC 57.230 33.333 0.00 0.00 33.22 2.92
3349 3640 9.958180 TTTGTGAGTTTATATTTCAGGATCTCA 57.042 29.630 0.00 0.00 0.00 3.27
3351 3642 9.401058 CCTTTGTGAGTTTATATTTCAGGATCT 57.599 33.333 0.00 0.00 0.00 2.75
3352 3643 8.624776 CCCTTTGTGAGTTTATATTTCAGGATC 58.375 37.037 0.00 0.00 0.00 3.36
3353 3644 8.336235 TCCCTTTGTGAGTTTATATTTCAGGAT 58.664 33.333 0.00 0.00 0.00 3.24
3354 3645 7.695055 TCCCTTTGTGAGTTTATATTTCAGGA 58.305 34.615 0.00 0.00 0.00 3.86
3355 3646 7.938140 TCCCTTTGTGAGTTTATATTTCAGG 57.062 36.000 0.00 0.00 0.00 3.86
3357 3648 9.120538 GCTATCCCTTTGTGAGTTTATATTTCA 57.879 33.333 0.00 0.00 0.00 2.69
3358 3649 9.120538 TGCTATCCCTTTGTGAGTTTATATTTC 57.879 33.333 0.00 0.00 0.00 2.17
3359 3650 9.646522 ATGCTATCCCTTTGTGAGTTTATATTT 57.353 29.630 0.00 0.00 0.00 1.40
3362 3653 9.555727 GTTATGCTATCCCTTTGTGAGTTTATA 57.444 33.333 0.00 0.00 0.00 0.98
3363 3654 7.226720 CGTTATGCTATCCCTTTGTGAGTTTAT 59.773 37.037 0.00 0.00 0.00 1.40
3364 3655 6.537301 CGTTATGCTATCCCTTTGTGAGTTTA 59.463 38.462 0.00 0.00 0.00 2.01
3365 3656 5.354234 CGTTATGCTATCCCTTTGTGAGTTT 59.646 40.000 0.00 0.00 0.00 2.66
3366 3657 4.876107 CGTTATGCTATCCCTTTGTGAGTT 59.124 41.667 0.00 0.00 0.00 3.01
3367 3658 4.081087 ACGTTATGCTATCCCTTTGTGAGT 60.081 41.667 0.00 0.00 0.00 3.41
3368 3659 4.271049 CACGTTATGCTATCCCTTTGTGAG 59.729 45.833 0.00 0.00 0.00 3.51
3369 3660 4.081365 TCACGTTATGCTATCCCTTTGTGA 60.081 41.667 0.00 0.00 0.00 3.58
3370 3661 4.188462 TCACGTTATGCTATCCCTTTGTG 58.812 43.478 0.00 0.00 0.00 3.33
3371 3662 4.481368 TCACGTTATGCTATCCCTTTGT 57.519 40.909 0.00 0.00 0.00 2.83
3372 3663 4.816385 ACATCACGTTATGCTATCCCTTTG 59.184 41.667 9.62 0.00 0.00 2.77
3373 3664 5.036117 ACATCACGTTATGCTATCCCTTT 57.964 39.130 9.62 0.00 0.00 3.11
3374 3665 4.345257 AGACATCACGTTATGCTATCCCTT 59.655 41.667 9.62 0.00 0.00 3.95
3375 3666 3.898123 AGACATCACGTTATGCTATCCCT 59.102 43.478 9.62 0.00 0.00 4.20
3376 3667 4.258702 AGACATCACGTTATGCTATCCC 57.741 45.455 9.62 0.00 0.00 3.85
3377 3668 7.709269 TTAAAGACATCACGTTATGCTATCC 57.291 36.000 9.62 0.00 0.00 2.59
3378 3669 8.600625 TGTTTAAAGACATCACGTTATGCTATC 58.399 33.333 9.62 0.70 0.00 2.08
3379 3670 8.487313 TGTTTAAAGACATCACGTTATGCTAT 57.513 30.769 9.62 0.00 0.00 2.97
3380 3671 7.892778 TGTTTAAAGACATCACGTTATGCTA 57.107 32.000 9.62 0.00 0.00 3.49
3381 3672 6.795098 TGTTTAAAGACATCACGTTATGCT 57.205 33.333 9.62 5.43 0.00 3.79
3382 3673 7.295201 TCTTGTTTAAAGACATCACGTTATGC 58.705 34.615 9.62 3.29 0.00 3.14
3383 3674 9.825972 ATTCTTGTTTAAAGACATCACGTTATG 57.174 29.630 8.17 8.17 0.00 1.90
3387 3678 9.436957 AGATATTCTTGTTTAAAGACATCACGT 57.563 29.630 0.00 0.00 0.00 4.49
3388 3679 9.907576 GAGATATTCTTGTTTAAAGACATCACG 57.092 33.333 0.00 0.00 0.00 4.35
3412 3703 1.830477 CAGGGGGAGTCTCTTCTTGAG 59.170 57.143 0.00 0.00 43.96 3.02
3413 3704 1.433199 TCAGGGGGAGTCTCTTCTTGA 59.567 52.381 0.00 2.34 0.00 3.02
3414 3705 1.944177 TCAGGGGGAGTCTCTTCTTG 58.056 55.000 0.00 0.04 0.00 3.02
3415 3706 2.959421 ATCAGGGGGAGTCTCTTCTT 57.041 50.000 0.00 0.00 0.00 2.52
3416 3707 2.758130 GAATCAGGGGGAGTCTCTTCT 58.242 52.381 0.00 0.00 37.62 2.85
3422 3713 0.620556 TGCAAGAATCAGGGGGAGTC 59.379 55.000 0.00 0.00 40.86 3.36
3423 3714 1.302907 ATGCAAGAATCAGGGGGAGT 58.697 50.000 0.00 0.00 0.00 3.85
3424 3715 3.330110 AGATATGCAAGAATCAGGGGGAG 59.670 47.826 0.00 0.00 0.00 4.30
3425 3716 3.073503 CAGATATGCAAGAATCAGGGGGA 59.926 47.826 0.00 0.00 0.00 4.81
3426 3717 3.418995 CAGATATGCAAGAATCAGGGGG 58.581 50.000 0.00 0.00 0.00 5.40
3427 3718 3.073503 TCCAGATATGCAAGAATCAGGGG 59.926 47.826 14.47 10.23 31.53 4.79
3428 3719 4.362470 TCCAGATATGCAAGAATCAGGG 57.638 45.455 14.47 11.94 31.53 4.45
3429 3720 5.128205 TGTTCCAGATATGCAAGAATCAGG 58.872 41.667 10.47 10.47 31.78 3.86
3430 3721 6.879276 ATGTTCCAGATATGCAAGAATCAG 57.121 37.500 0.00 0.00 0.00 2.90
3431 3722 7.738847 TCTATGTTCCAGATATGCAAGAATCA 58.261 34.615 0.00 0.00 0.00 2.57
3432 3723 8.613060 TTCTATGTTCCAGATATGCAAGAATC 57.387 34.615 0.00 0.00 0.00 2.52
3433 3724 8.216423 ACTTCTATGTTCCAGATATGCAAGAAT 58.784 33.333 0.00 0.00 0.00 2.40
3434 3725 7.568349 ACTTCTATGTTCCAGATATGCAAGAA 58.432 34.615 0.00 0.00 0.00 2.52
3435 3726 7.129457 ACTTCTATGTTCCAGATATGCAAGA 57.871 36.000 0.00 0.00 0.00 3.02
3436 3727 7.255035 CCAACTTCTATGTTCCAGATATGCAAG 60.255 40.741 0.00 0.00 0.00 4.01
3437 3728 6.543465 CCAACTTCTATGTTCCAGATATGCAA 59.457 38.462 0.00 0.00 0.00 4.08
3438 3729 6.057533 CCAACTTCTATGTTCCAGATATGCA 58.942 40.000 0.00 0.00 0.00 3.96
3439 3730 6.058183 ACCAACTTCTATGTTCCAGATATGC 58.942 40.000 0.00 0.00 0.00 3.14
3440 3731 8.642432 TCTACCAACTTCTATGTTCCAGATATG 58.358 37.037 0.00 0.00 0.00 1.78
3441 3732 8.783660 TCTACCAACTTCTATGTTCCAGATAT 57.216 34.615 0.00 0.00 0.00 1.63
3442 3733 8.059461 TCTCTACCAACTTCTATGTTCCAGATA 58.941 37.037 0.00 0.00 0.00 1.98
3443 3734 6.897966 TCTCTACCAACTTCTATGTTCCAGAT 59.102 38.462 0.00 0.00 0.00 2.90
3444 3735 6.153000 GTCTCTACCAACTTCTATGTTCCAGA 59.847 42.308 0.00 0.00 0.00 3.86
3445 3736 6.334202 GTCTCTACCAACTTCTATGTTCCAG 58.666 44.000 0.00 0.00 0.00 3.86
3446 3737 5.187186 GGTCTCTACCAACTTCTATGTTCCA 59.813 44.000 0.00 0.00 45.98 3.53
3447 3738 5.662456 GGTCTCTACCAACTTCTATGTTCC 58.338 45.833 0.00 0.00 45.98 3.62
3462 3753 4.894784 TGATTTGTTCACCAGGTCTCTAC 58.105 43.478 0.00 0.00 0.00 2.59
3463 3754 4.593206 ACTGATTTGTTCACCAGGTCTCTA 59.407 41.667 0.00 0.00 0.00 2.43
3464 3755 3.392616 ACTGATTTGTTCACCAGGTCTCT 59.607 43.478 0.00 0.00 0.00 3.10
3465 3756 3.744660 ACTGATTTGTTCACCAGGTCTC 58.255 45.455 0.00 0.00 0.00 3.36
3466 3757 3.744660 GACTGATTTGTTCACCAGGTCT 58.255 45.455 0.00 0.00 0.00 3.85
3467 3758 2.480419 CGACTGATTTGTTCACCAGGTC 59.520 50.000 0.00 0.00 0.00 3.85
3468 3759 2.494059 CGACTGATTTGTTCACCAGGT 58.506 47.619 0.00 0.00 0.00 4.00
3469 3760 1.197721 GCGACTGATTTGTTCACCAGG 59.802 52.381 0.00 0.00 0.00 4.45
3470 3761 1.872952 TGCGACTGATTTGTTCACCAG 59.127 47.619 0.00 0.00 0.00 4.00
3471 3762 1.960417 TGCGACTGATTTGTTCACCA 58.040 45.000 0.00 0.00 0.00 4.17
3472 3763 2.483877 TCATGCGACTGATTTGTTCACC 59.516 45.455 0.00 0.00 0.00 4.02
3473 3764 3.811722 TCATGCGACTGATTTGTTCAC 57.188 42.857 0.00 0.00 0.00 3.18
3480 3771 4.673580 GCAAGTCAAATCATGCGACTGATT 60.674 41.667 6.97 6.97 45.48 2.57
3481 3772 3.181503 GCAAGTCAAATCATGCGACTGAT 60.182 43.478 7.41 0.00 39.86 2.90
3482 3773 2.160219 GCAAGTCAAATCATGCGACTGA 59.840 45.455 7.41 0.00 39.86 3.41
3483 3774 2.095617 TGCAAGTCAAATCATGCGACTG 60.096 45.455 7.41 4.66 39.86 3.51
3484 3775 2.153645 TGCAAGTCAAATCATGCGACT 58.846 42.857 0.00 0.00 41.70 4.18
3485 3776 2.617250 TGCAAGTCAAATCATGCGAC 57.383 45.000 0.00 0.00 41.61 5.19
3486 3777 2.813172 TCTTGCAAGTCAAATCATGCGA 59.187 40.909 25.19 0.00 41.61 5.10
3487 3778 3.206034 TCTTGCAAGTCAAATCATGCG 57.794 42.857 25.19 0.00 41.61 4.73
3488 3779 6.749216 CATATCTTGCAAGTCAAATCATGC 57.251 37.500 25.19 0.00 39.22 4.06
3526 3817 8.682710 GGATGAAAACAGGTTACATAATAAGCA 58.317 33.333 0.00 0.00 0.00 3.91
3527 3818 7.855904 CGGATGAAAACAGGTTACATAATAAGC 59.144 37.037 5.28 0.00 0.00 3.09
3528 3819 8.342634 CCGGATGAAAACAGGTTACATAATAAG 58.657 37.037 0.00 0.00 0.00 1.73
3529 3820 7.283580 CCCGGATGAAAACAGGTTACATAATAA 59.716 37.037 0.73 0.00 0.00 1.40
3530 3821 6.768861 CCCGGATGAAAACAGGTTACATAATA 59.231 38.462 0.73 0.00 0.00 0.98
3531 3822 5.592688 CCCGGATGAAAACAGGTTACATAAT 59.407 40.000 0.73 0.00 0.00 1.28
3532 3823 4.944930 CCCGGATGAAAACAGGTTACATAA 59.055 41.667 0.73 0.00 0.00 1.90
3533 3824 4.519213 CCCGGATGAAAACAGGTTACATA 58.481 43.478 0.73 0.00 0.00 2.29
3534 3825 3.352648 CCCGGATGAAAACAGGTTACAT 58.647 45.455 0.73 5.06 0.00 2.29
3535 3826 2.785562 CCCGGATGAAAACAGGTTACA 58.214 47.619 0.73 0.00 0.00 2.41
3536 3827 1.471287 GCCCGGATGAAAACAGGTTAC 59.529 52.381 0.73 0.00 0.00 2.50
3537 3828 1.074084 TGCCCGGATGAAAACAGGTTA 59.926 47.619 0.73 0.00 0.00 2.85
3538 3829 0.178975 TGCCCGGATGAAAACAGGTT 60.179 50.000 0.73 0.00 0.00 3.50
3539 3830 0.178975 TTGCCCGGATGAAAACAGGT 60.179 50.000 0.73 0.00 0.00 4.00
3540 3831 0.243636 GTTGCCCGGATGAAAACAGG 59.756 55.000 0.73 0.00 0.00 4.00
3541 3832 0.958091 TGTTGCCCGGATGAAAACAG 59.042 50.000 0.73 0.00 0.00 3.16
3542 3833 0.671251 GTGTTGCCCGGATGAAAACA 59.329 50.000 0.73 3.03 0.00 2.83
3543 3834 0.671251 TGTGTTGCCCGGATGAAAAC 59.329 50.000 0.73 0.00 0.00 2.43
3544 3835 1.339610 CTTGTGTTGCCCGGATGAAAA 59.660 47.619 0.73 0.00 0.00 2.29
3545 3836 0.958091 CTTGTGTTGCCCGGATGAAA 59.042 50.000 0.73 0.00 0.00 2.69
3546 3837 0.109532 TCTTGTGTTGCCCGGATGAA 59.890 50.000 0.73 0.00 0.00 2.57
3547 3838 0.109532 TTCTTGTGTTGCCCGGATGA 59.890 50.000 0.73 0.00 0.00 2.92
3548 3839 0.958091 TTTCTTGTGTTGCCCGGATG 59.042 50.000 0.73 0.00 0.00 3.51
3549 3840 0.958822 GTTTCTTGTGTTGCCCGGAT 59.041 50.000 0.73 0.00 0.00 4.18
3550 3841 0.394488 TGTTTCTTGTGTTGCCCGGA 60.394 50.000 0.73 0.00 0.00 5.14
3551 3842 0.673437 ATGTTTCTTGTGTTGCCCGG 59.327 50.000 0.00 0.00 0.00 5.73
3552 3843 2.507339 AATGTTTCTTGTGTTGCCCG 57.493 45.000 0.00 0.00 0.00 6.13
3553 3844 4.165779 CGATAATGTTTCTTGTGTTGCCC 58.834 43.478 0.00 0.00 0.00 5.36
3554 3845 4.794169 ACGATAATGTTTCTTGTGTTGCC 58.206 39.130 0.00 0.00 0.00 4.52
3555 3846 5.912396 TCAACGATAATGTTTCTTGTGTTGC 59.088 36.000 0.00 0.00 35.42 4.17
3556 3847 7.351981 TCTCAACGATAATGTTTCTTGTGTTG 58.648 34.615 0.00 0.00 36.44 3.33
3557 3848 7.490962 TCTCAACGATAATGTTTCTTGTGTT 57.509 32.000 0.00 0.00 0.00 3.32
3558 3849 7.672983 ATCTCAACGATAATGTTTCTTGTGT 57.327 32.000 0.00 0.00 0.00 3.72


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.