Multiple sequence alignment - TraesCS7D01G307200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G307200 chr7D 100.000 6883 0 0 1 6883 389000739 388993857 0.000000e+00 12711.0
1 TraesCS7D01G307200 chr7D 80.342 468 83 5 4274 4733 3103954 3103488 5.110000e-91 346.0
2 TraesCS7D01G307200 chr7D 80.952 441 81 3 4274 4712 3159814 3160253 5.110000e-91 346.0
3 TraesCS7D01G307200 chr7D 96.629 178 6 0 6090 6267 367574407 367574230 5.220000e-76 296.0
4 TraesCS7D01G307200 chr7D 100.000 28 0 0 74 101 554197296 554197323 1.200000e-02 52.8
5 TraesCS7D01G307200 chr7B 92.347 3306 180 28 836 4076 384203607 384200310 0.000000e+00 4636.0
6 TraesCS7D01G307200 chr7B 93.508 1910 75 21 4137 6007 384193305 384191406 0.000000e+00 2795.0
7 TraesCS7D01G307200 chr7B 82.201 927 116 13 1532 2431 510763587 510762683 0.000000e+00 752.0
8 TraesCS7D01G307200 chr7B 94.977 219 11 0 6273 6491 384191428 384191210 1.840000e-90 344.0
9 TraesCS7D01G307200 chr7B 96.629 178 6 0 6090 6267 237570224 237570401 5.220000e-76 296.0
10 TraesCS7D01G307200 chr7B 97.647 85 2 0 4057 4141 384200130 384200046 5.560000e-31 147.0
11 TraesCS7D01G307200 chr7A 95.420 2511 65 18 2570 5037 439634046 439631543 0.000000e+00 3954.0
12 TraesCS7D01G307200 chr7A 93.687 2487 124 18 1 2465 439636512 439634037 0.000000e+00 3692.0
13 TraesCS7D01G307200 chr7A 96.950 754 18 5 5259 6008 439631415 439630663 0.000000e+00 1260.0
14 TraesCS7D01G307200 chr7A 81.809 1017 146 26 1622 2616 556487252 556486253 0.000000e+00 817.0
15 TraesCS7D01G307200 chr7A 85.956 413 44 11 6273 6674 439630686 439630277 4.930000e-116 429.0
16 TraesCS7D01G307200 chr7A 90.698 43 4 0 2716 2758 17689962 17690004 2.680000e-04 58.4
17 TraesCS7D01G307200 chr4A 83.005 1218 138 31 1532 2713 574846777 574847961 0.000000e+00 1038.0
18 TraesCS7D01G307200 chr4A 95.377 411 13 4 6473 6883 456448938 456448534 0.000000e+00 649.0
19 TraesCS7D01G307200 chr3D 82.091 1234 141 36 1528 2711 570142853 570144056 0.000000e+00 981.0
20 TraesCS7D01G307200 chr3D 83.129 978 126 18 1532 2481 108838436 108837470 0.000000e+00 856.0
21 TraesCS7D01G307200 chr3D 79.457 1032 174 27 1528 2546 572183573 572184579 0.000000e+00 697.0
22 TraesCS7D01G307200 chr3D 81.807 830 96 23 1532 2346 393010447 393009658 0.000000e+00 645.0
23 TraesCS7D01G307200 chr3D 79.588 534 92 10 4231 4753 525756296 525755769 3.920000e-97 366.0
24 TraesCS7D01G307200 chr2A 81.907 1227 134 27 1521 2714 771348850 771350021 0.000000e+00 955.0
25 TraesCS7D01G307200 chr2A 89.385 179 18 1 3550 3728 203280021 203279844 2.500000e-54 224.0
26 TraesCS7D01G307200 chr6A 81.276 1223 187 29 1524 2714 115336714 115337926 0.000000e+00 952.0
27 TraesCS7D01G307200 chr6A 78.067 538 93 17 4235 4757 554781748 554782275 4.010000e-82 316.0
28 TraesCS7D01G307200 chr6A 84.825 257 35 3 3087 3340 577867687 577867432 8.860000e-64 255.0
29 TraesCS7D01G307200 chr6A 97.500 40 1 0 2717 2756 614852464 614852503 1.240000e-07 69.4
30 TraesCS7D01G307200 chr1D 79.572 1214 182 36 1532 2705 479597288 479598475 0.000000e+00 808.0
31 TraesCS7D01G307200 chr1D 78.937 489 91 6 4274 4753 387422503 387422988 8.610000e-84 322.0
32 TraesCS7D01G307200 chr1D 78.969 485 89 7 4231 4712 234749127 234749601 1.110000e-82 318.0
33 TraesCS7D01G307200 chr1D 97.191 178 5 0 6090 6267 204023445 204023268 1.120000e-77 302.0
34 TraesCS7D01G307200 chr1D 78.465 469 91 6 4274 4733 396886474 396886007 1.450000e-76 298.0
35 TraesCS7D01G307200 chr1D 96.629 178 6 0 6090 6267 245199011 245199188 5.220000e-76 296.0
36 TraesCS7D01G307200 chr1D 87.395 238 26 3 3087 3321 366857401 366857637 3.160000e-68 270.0
37 TraesCS7D01G307200 chr1D 94.737 38 2 0 2716 2753 401438728 401438765 7.460000e-05 60.2
38 TraesCS7D01G307200 chr2D 83.607 793 110 12 1940 2714 318582048 318582838 0.000000e+00 726.0
39 TraesCS7D01G307200 chr2D 97.722 395 6 3 6489 6882 20920481 20920089 0.000000e+00 676.0
40 TraesCS7D01G307200 chr2D 84.597 422 45 14 4936 5350 70636506 70636914 1.080000e-107 401.0
41 TraesCS7D01G307200 chr2D 84.123 359 37 13 4937 5291 628591563 628591221 5.150000e-86 329.0
42 TraesCS7D01G307200 chr2D 97.191 178 5 0 6090 6267 620684978 620685155 1.120000e-77 302.0
43 TraesCS7D01G307200 chr2D 89.268 205 20 2 3550 3754 189370066 189369864 8.860000e-64 255.0
44 TraesCS7D01G307200 chr2D 96.875 32 0 1 71 101 298943792 298943761 1.200000e-02 52.8
45 TraesCS7D01G307200 chr5D 98.473 393 4 2 6491 6883 435585209 435585599 0.000000e+00 691.0
46 TraesCS7D01G307200 chr5D 78.297 1198 146 57 1533 2713 11211378 11210278 0.000000e+00 667.0
47 TraesCS7D01G307200 chr5D 97.194 392 10 1 6492 6883 59938417 59938027 0.000000e+00 662.0
48 TraesCS7D01G307200 chr5D 84.742 426 45 12 4936 5353 511950730 511950317 6.430000e-110 409.0
49 TraesCS7D01G307200 chr5D 84.419 430 38 17 4935 5352 258256037 258256449 5.000000e-106 396.0
50 TraesCS7D01G307200 chr5D 96.629 178 6 0 6090 6267 370224883 370224706 5.220000e-76 296.0
51 TraesCS7D01G307200 chr5D 88.186 237 25 2 3087 3321 4030140 4029905 5.260000e-71 279.0
52 TraesCS7D01G307200 chr5D 97.500 40 1 0 2716 2755 11210247 11210208 1.240000e-07 69.4
53 TraesCS7D01G307200 chr4D 97.449 392 8 2 6492 6883 307814743 307814354 0.000000e+00 667.0
54 TraesCS7D01G307200 chr4D 97.449 392 7 2 6492 6883 383855346 383854958 0.000000e+00 665.0
55 TraesCS7D01G307200 chr4D 74.549 1108 213 43 1584 2658 505703515 505702444 2.970000e-113 420.0
56 TraesCS7D01G307200 chr4D 78.014 423 88 5 4274 4693 221430687 221430267 1.900000e-65 261.0
57 TraesCS7D01G307200 chr4D 81.293 294 42 10 4422 4712 417812547 417812830 6.950000e-55 226.0
58 TraesCS7D01G307200 chr6D 97.906 382 8 0 6502 6883 61768477 61768096 0.000000e+00 662.0
59 TraesCS7D01G307200 chr6D 95.707 396 14 3 6489 6883 411996680 411997073 9.740000e-178 634.0
60 TraesCS7D01G307200 chr6D 81.231 666 105 13 1532 2184 373825006 373824348 2.850000e-143 520.0
61 TraesCS7D01G307200 chr6D 80.112 538 93 8 4231 4757 394210084 394209550 8.370000e-104 388.0
62 TraesCS7D01G307200 chr6D 81.148 488 78 8 4274 4752 422193931 422194413 5.040000e-101 379.0
63 TraesCS7D01G307200 chr6D 79.848 526 95 5 4235 4751 423480232 423479709 2.340000e-99 374.0
64 TraesCS7D01G307200 chr6D 77.938 485 104 3 4231 4713 391922651 391923134 4.040000e-77 300.0
65 TraesCS7D01G307200 chr6D 78.280 465 92 4 4274 4730 62884230 62884693 2.430000e-74 291.0
66 TraesCS7D01G307200 chr6D 72.803 478 111 15 4242 4712 462353791 462353326 2.000000e-30 145.0
67 TraesCS7D01G307200 chr6D 73.098 368 85 11 4267 4624 470029360 470029723 1.210000e-22 119.0
68 TraesCS7D01G307200 chr6D 83.333 60 9 1 43 101 99848494 99848553 3.000000e-03 54.7
69 TraesCS7D01G307200 chr3A 96.173 392 14 1 6492 6883 74212703 74212313 2.090000e-179 640.0
70 TraesCS7D01G307200 chr3A 96.774 31 1 0 71 101 576602762 576602792 1.200000e-02 52.8
71 TraesCS7D01G307200 chr2B 78.998 938 145 29 1808 2714 165109701 165110617 1.650000e-165 593.0
72 TraesCS7D01G307200 chr2B 82.438 484 80 5 4231 4712 5475414 5474934 1.070000e-112 418.0
73 TraesCS7D01G307200 chr2B 83.452 423 54 10 4936 5353 96104735 96104324 5.040000e-101 379.0
74 TraesCS7D01G307200 chr2B 87.402 254 26 4 3074 3321 273869753 273870006 3.140000e-73 287.0
75 TraesCS7D01G307200 chr2B 88.780 205 22 1 3550 3754 245686812 245686609 4.120000e-62 250.0
76 TraesCS7D01G307200 chr2B 97.368 38 1 0 2716 2753 751313092 751313129 1.600000e-06 65.8
77 TraesCS7D01G307200 chr2B 100.000 28 0 0 74 101 738510370 738510343 1.200000e-02 52.8
78 TraesCS7D01G307200 chr4B 79.135 925 141 24 1852 2749 41191029 41190130 5.940000e-165 592.0
79 TraesCS7D01G307200 chr4B 75.652 690 130 23 2053 2711 661246915 661246233 6.700000e-80 309.0
80 TraesCS7D01G307200 chr4B 88.186 237 26 1 3087 3321 183524986 183525222 1.460000e-71 281.0
81 TraesCS7D01G307200 chr3B 81.202 782 103 21 1938 2712 160278624 160277880 2.140000e-164 590.0
82 TraesCS7D01G307200 chr3B 100.000 32 0 0 2726 2757 521116174 521116143 7.460000e-05 60.2
83 TraesCS7D01G307200 chr5A 86.385 426 38 12 4935 5354 343063422 343063011 1.360000e-121 448.0
84 TraesCS7D01G307200 chr5A 79.208 505 94 5 4256 4750 684314614 684315117 2.380000e-89 340.0
85 TraesCS7D01G307200 chr5A 88.235 238 26 1 3086 3321 589296693 589296930 4.060000e-72 283.0
86 TraesCS7D01G307200 chr5B 86.052 423 38 12 4935 5354 292485812 292486216 1.060000e-117 435.0
87 TraesCS7D01G307200 chr5B 96.685 181 6 0 6087 6267 38170215 38170395 1.120000e-77 302.0
88 TraesCS7D01G307200 chr5B 97.191 178 5 0 6090 6267 300379944 300380121 1.120000e-77 302.0
89 TraesCS7D01G307200 chr1A 84.524 420 48 8 1532 1951 575873498 575873900 3.870000e-107 399.0
90 TraesCS7D01G307200 chr1A 94.595 37 1 1 2727 2762 550214931 550214967 1.000000e-03 56.5
91 TraesCS7D01G307200 chr6B 83.529 425 44 17 4936 5353 68294706 68295111 2.340000e-99 374.0
92 TraesCS7D01G307200 chr6B 79.764 509 90 7 4235 4733 348687466 348686961 2.360000e-94 357.0
93 TraesCS7D01G307200 chr6B 79.492 512 92 7 4232 4733 348659090 348659598 1.100000e-92 351.0
94 TraesCS7D01G307200 chr6B 85.551 263 34 3 3063 3321 650791171 650790909 8.800000e-69 272.0
95 TraesCS7D01G307200 chr1B 79.184 490 88 8 4274 4752 573579966 573580452 1.850000e-85 327.0
96 TraesCS7D01G307200 chr1B 78.344 157 29 5 4950 5104 394875667 394875820 5.680000e-16 97.1
97 TraesCS7D01G307200 chrUn 97.191 178 5 0 6090 6267 81295160 81294983 1.120000e-77 302.0
98 TraesCS7D01G307200 chrUn 76.790 405 80 5 4310 4712 30338114 30337722 1.500000e-51 215.0
99 TraesCS7D01G307200 chrUn 75.221 339 67 12 4269 4601 217828202 217827875 2.000000e-30 145.0
100 TraesCS7D01G307200 chrUn 75.221 339 67 12 4269 4601 227092470 227092143 2.000000e-30 145.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G307200 chr7D 388993857 389000739 6882 True 12711.00 12711 100.00000 1 6883 1 chr7D.!!$R3 6882
1 TraesCS7D01G307200 chr7B 384200046 384203607 3561 True 2391.50 4636 94.99700 836 4141 2 chr7B.!!$R3 3305
2 TraesCS7D01G307200 chr7B 384191210 384193305 2095 True 1569.50 2795 94.24250 4137 6491 2 chr7B.!!$R2 2354
3 TraesCS7D01G307200 chr7B 510762683 510763587 904 True 752.00 752 82.20100 1532 2431 1 chr7B.!!$R1 899
4 TraesCS7D01G307200 chr7A 439630277 439636512 6235 True 2333.75 3954 93.00325 1 6674 4 chr7A.!!$R2 6673
5 TraesCS7D01G307200 chr7A 556486253 556487252 999 True 817.00 817 81.80900 1622 2616 1 chr7A.!!$R1 994
6 TraesCS7D01G307200 chr4A 574846777 574847961 1184 False 1038.00 1038 83.00500 1532 2713 1 chr4A.!!$F1 1181
7 TraesCS7D01G307200 chr3D 570142853 570144056 1203 False 981.00 981 82.09100 1528 2711 1 chr3D.!!$F1 1183
8 TraesCS7D01G307200 chr3D 108837470 108838436 966 True 856.00 856 83.12900 1532 2481 1 chr3D.!!$R1 949
9 TraesCS7D01G307200 chr3D 572183573 572184579 1006 False 697.00 697 79.45700 1528 2546 1 chr3D.!!$F2 1018
10 TraesCS7D01G307200 chr3D 393009658 393010447 789 True 645.00 645 81.80700 1532 2346 1 chr3D.!!$R2 814
11 TraesCS7D01G307200 chr3D 525755769 525756296 527 True 366.00 366 79.58800 4231 4753 1 chr3D.!!$R3 522
12 TraesCS7D01G307200 chr2A 771348850 771350021 1171 False 955.00 955 81.90700 1521 2714 1 chr2A.!!$F1 1193
13 TraesCS7D01G307200 chr6A 115336714 115337926 1212 False 952.00 952 81.27600 1524 2714 1 chr6A.!!$F1 1190
14 TraesCS7D01G307200 chr6A 554781748 554782275 527 False 316.00 316 78.06700 4235 4757 1 chr6A.!!$F2 522
15 TraesCS7D01G307200 chr1D 479597288 479598475 1187 False 808.00 808 79.57200 1532 2705 1 chr1D.!!$F6 1173
16 TraesCS7D01G307200 chr2D 318582048 318582838 790 False 726.00 726 83.60700 1940 2714 1 chr2D.!!$F2 774
17 TraesCS7D01G307200 chr5D 11210208 11211378 1170 True 368.20 667 87.89850 1533 2755 2 chr5D.!!$R5 1222
18 TraesCS7D01G307200 chr4D 505702444 505703515 1071 True 420.00 420 74.54900 1584 2658 1 chr4D.!!$R4 1074
19 TraesCS7D01G307200 chr6D 373824348 373825006 658 True 520.00 520 81.23100 1532 2184 1 chr6D.!!$R2 652
20 TraesCS7D01G307200 chr6D 394209550 394210084 534 True 388.00 388 80.11200 4231 4757 1 chr6D.!!$R3 526
21 TraesCS7D01G307200 chr6D 423479709 423480232 523 True 374.00 374 79.84800 4235 4751 1 chr6D.!!$R4 516
22 TraesCS7D01G307200 chr2B 165109701 165110617 916 False 593.00 593 78.99800 1808 2714 1 chr2B.!!$F1 906
23 TraesCS7D01G307200 chr4B 41190130 41191029 899 True 592.00 592 79.13500 1852 2749 1 chr4B.!!$R1 897
24 TraesCS7D01G307200 chr4B 661246233 661246915 682 True 309.00 309 75.65200 2053 2711 1 chr4B.!!$R2 658
25 TraesCS7D01G307200 chr3B 160277880 160278624 744 True 590.00 590 81.20200 1938 2712 1 chr3B.!!$R1 774
26 TraesCS7D01G307200 chr5A 684314614 684315117 503 False 340.00 340 79.20800 4256 4750 1 chr5A.!!$F2 494
27 TraesCS7D01G307200 chr6B 348686961 348687466 505 True 357.00 357 79.76400 4235 4733 1 chr6B.!!$R1 498
28 TraesCS7D01G307200 chr6B 348659090 348659598 508 False 351.00 351 79.49200 4232 4733 1 chr6B.!!$F2 501

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
209 211 1.066573 AGCGACAGAGTGATTTCCCTG 60.067 52.381 0.0 0.0 0.00 4.45 F
1311 1351 0.815615 CATCTCTTACGCCTTGGCCC 60.816 60.000 0.0 0.0 0.00 5.80 F
1909 1989 1.218316 GTCGCAGTCGGGGAAGATT 59.782 57.895 0.0 0.0 40.51 2.40 F
2329 2491 2.203294 ATATCCCCCGCAAACGCC 60.203 61.111 0.0 0.0 38.22 5.68 F
4161 4646 0.112412 GTTGGCTTTCCTTCCCCTCA 59.888 55.000 0.0 0.0 0.00 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1909 1989 2.750637 GTCGAGGAGTGGCGGAGA 60.751 66.667 0.00 0.00 0.00 3.71 R
2378 2558 1.522806 CGATCCGCCGATTTCCCAA 60.523 57.895 0.00 0.00 0.00 4.12 R
2714 2955 3.120108 TCCCCAATAACTGGTTAGAGGG 58.880 50.000 18.30 18.30 44.76 4.30 R
4182 4667 1.830477 GCAGAGATTGAGTGAGGAGGT 59.170 52.381 0.00 0.00 0.00 3.85 R
6010 6549 0.034059 CCGGTCTATCATGAGCACCC 59.966 60.000 12.65 5.01 34.46 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 2.608268 CGCATTGTCCAAATTGATGCA 58.392 42.857 14.75 0.00 42.31 3.96
27 28 4.439057 GCATTGTCCAAATTGATGCAGAT 58.561 39.130 11.07 0.00 41.92 2.90
31 32 5.777850 TGTCCAAATTGATGCAGATATGG 57.222 39.130 0.00 0.00 0.00 2.74
33 34 3.575256 TCCAAATTGATGCAGATATGGGC 59.425 43.478 0.00 0.00 0.00 5.36
40 41 3.138098 TGATGCAGATATGGGCCAAACTA 59.862 43.478 11.89 0.00 0.00 2.24
42 43 1.882623 GCAGATATGGGCCAAACTAGC 59.117 52.381 11.89 9.23 0.00 3.42
52 53 1.156736 CCAAACTAGCGACCCAACAG 58.843 55.000 0.00 0.00 0.00 3.16
83 85 5.713025 AGATCAAATTCATGTTCGTTTGGG 58.287 37.500 0.00 0.00 33.55 4.12
88 90 1.209127 CATGTTCGTTTGGGTCGGC 59.791 57.895 0.00 0.00 0.00 5.54
143 145 4.164258 AGTGGACAACTTGCCTGC 57.836 55.556 4.52 0.00 34.57 4.85
160 162 3.618997 GCCTGCTGTGCCTAGTTTACTTA 60.619 47.826 0.00 0.00 0.00 2.24
191 193 4.684703 TCTTCTTCAACTACAACGCTAAGC 59.315 41.667 0.00 0.00 0.00 3.09
209 211 1.066573 AGCGACAGAGTGATTTCCCTG 60.067 52.381 0.00 0.00 0.00 4.45
220 222 4.584743 AGTGATTTCCCTGTTTGGTTTCTC 59.415 41.667 0.00 0.00 0.00 2.87
225 227 5.592104 TTCCCTGTTTGGTTTCTCTTTTC 57.408 39.130 0.00 0.00 0.00 2.29
227 229 5.269189 TCCCTGTTTGGTTTCTCTTTTCTT 58.731 37.500 0.00 0.00 0.00 2.52
228 230 5.719563 TCCCTGTTTGGTTTCTCTTTTCTTT 59.280 36.000 0.00 0.00 0.00 2.52
253 255 1.289066 GCTTGCCCGGGTTTTCTTC 59.711 57.895 24.63 3.28 0.00 2.87
275 277 9.981114 TCTTCTGTGTTTTTCTTTTTCTTTTCT 57.019 25.926 0.00 0.00 0.00 2.52
277 279 9.981114 TTCTGTGTTTTTCTTTTTCTTTTCTCT 57.019 25.926 0.00 0.00 0.00 3.10
367 369 8.922931 ACCTTTTGAATGCTTTTTAAATCCAT 57.077 26.923 0.00 0.00 0.00 3.41
527 531 7.961827 TGAACTTGTTTTTCAAAATTGATGCAC 59.038 29.630 0.00 0.00 37.00 4.57
530 534 8.513774 ACTTGTTTTTCAAAATTGATGCACTTT 58.486 25.926 0.00 0.00 37.00 2.66
666 670 5.872963 AGTTTTCTAAATTACCGTGGACCT 58.127 37.500 0.00 0.00 0.00 3.85
676 680 6.997239 ATTACCGTGGACCTTTTCTAATTC 57.003 37.500 0.00 0.00 0.00 2.17
678 682 4.918588 ACCGTGGACCTTTTCTAATTCAT 58.081 39.130 0.00 0.00 0.00 2.57
683 687 6.621613 GTGGACCTTTTCTAATTCATGAACC 58.378 40.000 11.07 3.39 0.00 3.62
877 897 1.531748 CCATGATACTGGGCCGGTT 59.468 57.895 25.61 11.62 32.28 4.44
989 1029 1.123861 TCCACTGCTTGTCTCCAGCT 61.124 55.000 0.00 0.00 32.37 4.24
1311 1351 0.815615 CATCTCTTACGCCTTGGCCC 60.816 60.000 0.00 0.00 0.00 5.80
1446 1487 4.520874 TCTCCGGCATGTGTTTTAATCAAA 59.479 37.500 0.00 0.00 0.00 2.69
1454 1495 7.393327 GCATGTGTTTTAATCAAATGATTCGG 58.607 34.615 11.69 0.00 43.17 4.30
1720 1769 8.599055 TGCATGCATTTAAACATAAGTTCAAA 57.401 26.923 18.46 0.00 36.84 2.69
1909 1989 1.218316 GTCGCAGTCGGGGAAGATT 59.782 57.895 0.00 0.00 40.51 2.40
2321 2483 2.829384 CCACCACCCATATCCCCCG 61.829 68.421 0.00 0.00 0.00 5.73
2329 2491 2.203294 ATATCCCCCGCAAACGCC 60.203 61.111 0.00 0.00 38.22 5.68
2541 2742 2.308722 GGCCATTGGGAGGTGAGGA 61.309 63.158 4.53 0.00 35.59 3.71
2652 2882 3.877508 GCCGAGCAGTGGAGTAAAAATAT 59.122 43.478 0.00 0.00 0.00 1.28
2827 3096 2.849942 TGGGTACTCGCGCTAGTATTA 58.150 47.619 22.73 10.86 34.59 0.98
2830 3099 3.120373 GGGTACTCGCGCTAGTATTACTC 60.120 52.174 22.73 10.83 34.59 2.59
2870 3139 2.965831 ACTGACTCAGCCTTGTTGTCTA 59.034 45.455 5.92 0.00 34.37 2.59
3844 4130 8.993121 ACATGGAAATACGCAGATTAAGATAAG 58.007 33.333 0.00 0.00 0.00 1.73
3889 4175 3.009033 TCCAGCAAACCATAGTTGCTACT 59.991 43.478 11.02 6.00 37.88 2.57
3906 4192 1.366319 ACTCTGGGTTCTCCAATGCT 58.634 50.000 0.00 0.00 46.51 3.79
4161 4646 0.112412 GTTGGCTTTCCTTCCCCTCA 59.888 55.000 0.00 0.00 0.00 3.86
4182 4667 1.079405 CAAGGCGAGTAGGGCGAAA 60.079 57.895 0.00 0.00 37.59 3.46
4225 4711 1.443828 GAGCCCGTGGAATCTCCTC 59.556 63.158 0.00 0.00 37.46 3.71
4604 5109 2.358737 GTCAGGCTGGTTCCGGTG 60.359 66.667 15.73 0.00 0.00 4.94
4784 5298 0.537188 TTGGCCCTTTTGTTTGCGAA 59.463 45.000 0.00 0.00 0.00 4.70
4933 5448 1.002366 CAGTATTGAGAGGCACACGC 58.998 55.000 0.00 0.00 37.44 5.34
5079 5598 8.728088 ATACTTTCGTGTGAAATTTCATGAAC 57.272 30.769 23.05 18.83 42.90 3.18
5099 5619 6.469410 TGAACAAATACCAGGAAACGTATCT 58.531 36.000 0.00 0.00 0.00 1.98
5228 5748 8.665643 TTTTTCTACGGAACTTCATAACTTCA 57.334 30.769 0.00 0.00 0.00 3.02
5274 5794 7.362401 CCCAAGTTTGATAGTCCAAGATTTCAG 60.362 40.741 0.00 0.00 0.00 3.02
5492 6015 7.579589 TTCTGAATTGAACTTTGTGTTGTTG 57.420 32.000 0.00 0.00 39.30 3.33
5514 6037 7.541783 TGTTGTTTTTCTCTGCATGTATATTGC 59.458 33.333 0.00 4.19 40.55 3.56
5565 6088 8.958043 GTCGTGAATTTTATGAAATTATGCCTC 58.042 33.333 8.07 0.00 43.61 4.70
5575 6098 9.693739 TTATGAAATTATGCCTCTTGGTTTCTA 57.306 29.630 0.00 0.00 35.27 2.10
5682 6205 4.802039 GTGTTAGCGCTAAACATGCTACTA 59.198 41.667 30.26 1.91 40.65 1.82
5749 6272 4.067972 ACTGGTGTTACAAGTGGTACTG 57.932 45.455 0.00 0.00 0.00 2.74
6005 6544 8.634444 CCTGAGTAAGCTACACTGTAGAAATAT 58.366 37.037 18.78 2.59 0.00 1.28
6006 6545 9.457110 CTGAGTAAGCTACACTGTAGAAATATG 57.543 37.037 18.78 0.00 0.00 1.78
6007 6546 8.967918 TGAGTAAGCTACACTGTAGAAATATGT 58.032 33.333 18.78 0.00 0.00 2.29
6012 6551 7.671302 AGCTACACTGTAGAAATATGTATGGG 58.329 38.462 18.78 0.00 0.00 4.00
6013 6552 7.290248 AGCTACACTGTAGAAATATGTATGGGT 59.710 37.037 18.78 0.00 0.00 4.51
6014 6553 7.385205 GCTACACTGTAGAAATATGTATGGGTG 59.615 40.741 18.78 0.00 0.00 4.61
6015 6554 6.055588 ACACTGTAGAAATATGTATGGGTGC 58.944 40.000 0.00 0.00 0.00 5.01
6016 6555 6.126768 ACACTGTAGAAATATGTATGGGTGCT 60.127 38.462 0.00 0.00 0.00 4.40
6017 6556 6.425114 CACTGTAGAAATATGTATGGGTGCTC 59.575 42.308 0.00 0.00 0.00 4.26
6018 6557 6.099701 ACTGTAGAAATATGTATGGGTGCTCA 59.900 38.462 0.00 0.00 0.00 4.26
6019 6558 7.078249 TGTAGAAATATGTATGGGTGCTCAT 57.922 36.000 0.00 0.00 0.00 2.90
6020 6559 6.936335 TGTAGAAATATGTATGGGTGCTCATG 59.064 38.462 0.00 0.00 0.00 3.07
6021 6560 6.191657 AGAAATATGTATGGGTGCTCATGA 57.808 37.500 0.00 0.00 0.00 3.07
6022 6561 6.787170 AGAAATATGTATGGGTGCTCATGAT 58.213 36.000 0.00 0.00 0.00 2.45
6023 6562 7.921304 AGAAATATGTATGGGTGCTCATGATA 58.079 34.615 0.00 0.00 0.00 2.15
6024 6563 8.045507 AGAAATATGTATGGGTGCTCATGATAG 58.954 37.037 0.00 0.00 0.00 2.08
6025 6564 7.500629 AATATGTATGGGTGCTCATGATAGA 57.499 36.000 0.00 0.00 0.00 1.98
6026 6565 4.607293 TGTATGGGTGCTCATGATAGAC 57.393 45.455 0.00 0.00 0.00 2.59
6027 6566 3.324846 TGTATGGGTGCTCATGATAGACC 59.675 47.826 0.00 2.57 0.00 3.85
6028 6567 0.752658 TGGGTGCTCATGATAGACCG 59.247 55.000 0.00 0.00 0.00 4.79
6029 6568 0.034059 GGGTGCTCATGATAGACCGG 59.966 60.000 0.00 0.00 0.00 5.28
6030 6569 1.040646 GGTGCTCATGATAGACCGGA 58.959 55.000 9.46 0.00 0.00 5.14
6031 6570 1.000283 GGTGCTCATGATAGACCGGAG 60.000 57.143 9.46 0.00 0.00 4.63
6032 6571 1.683917 GTGCTCATGATAGACCGGAGT 59.316 52.381 9.46 0.00 0.00 3.85
6033 6572 2.885266 GTGCTCATGATAGACCGGAGTA 59.115 50.000 9.46 0.00 0.00 2.59
6034 6573 3.318275 GTGCTCATGATAGACCGGAGTAA 59.682 47.826 9.46 0.00 0.00 2.24
6035 6574 3.570125 TGCTCATGATAGACCGGAGTAAG 59.430 47.826 9.46 0.00 0.00 2.34
6036 6575 3.612955 GCTCATGATAGACCGGAGTAAGC 60.613 52.174 9.46 0.55 0.00 3.09
6037 6576 3.823873 CTCATGATAGACCGGAGTAAGCT 59.176 47.826 9.46 0.00 0.00 3.74
6038 6577 4.981812 TCATGATAGACCGGAGTAAGCTA 58.018 43.478 9.46 0.00 0.00 3.32
6039 6578 4.760715 TCATGATAGACCGGAGTAAGCTAC 59.239 45.833 9.46 0.00 0.00 3.58
6040 6579 4.160642 TGATAGACCGGAGTAAGCTACA 57.839 45.455 9.46 0.00 0.00 2.74
6041 6580 3.881688 TGATAGACCGGAGTAAGCTACAC 59.118 47.826 9.46 0.00 0.00 2.90
6042 6581 2.510928 AGACCGGAGTAAGCTACACT 57.489 50.000 9.46 0.64 0.00 3.55
6043 6582 2.093106 AGACCGGAGTAAGCTACACTG 58.907 52.381 9.46 0.36 0.00 3.66
6044 6583 1.817447 GACCGGAGTAAGCTACACTGT 59.183 52.381 9.46 0.00 0.00 3.55
6045 6584 3.012518 GACCGGAGTAAGCTACACTGTA 58.987 50.000 9.46 0.00 0.00 2.74
6046 6585 3.015327 ACCGGAGTAAGCTACACTGTAG 58.985 50.000 9.46 11.37 0.00 2.74
6047 6586 3.276857 CCGGAGTAAGCTACACTGTAGA 58.723 50.000 18.78 0.00 0.00 2.59
6048 6587 3.693085 CCGGAGTAAGCTACACTGTAGAA 59.307 47.826 18.78 2.05 0.00 2.10
6049 6588 4.157289 CCGGAGTAAGCTACACTGTAGAAA 59.843 45.833 18.78 1.73 0.00 2.52
6050 6589 5.163540 CCGGAGTAAGCTACACTGTAGAAAT 60.164 44.000 18.78 7.10 0.00 2.17
6051 6590 6.039047 CCGGAGTAAGCTACACTGTAGAAATA 59.961 42.308 18.78 6.26 0.00 1.40
6052 6591 7.255520 CCGGAGTAAGCTACACTGTAGAAATAT 60.256 40.741 18.78 2.59 0.00 1.28
6053 6592 7.591795 CGGAGTAAGCTACACTGTAGAAATATG 59.408 40.741 18.78 0.00 0.00 1.78
6054 6593 8.414778 GGAGTAAGCTACACTGTAGAAATATGT 58.585 37.037 18.78 0.00 0.00 2.29
6055 6594 9.804758 GAGTAAGCTACACTGTAGAAATATGTT 57.195 33.333 18.78 4.02 0.00 2.71
6058 6597 7.849804 AGCTACACTGTAGAAATATGTTTGG 57.150 36.000 18.78 0.00 0.00 3.28
6059 6598 6.823689 AGCTACACTGTAGAAATATGTTTGGG 59.176 38.462 18.78 0.00 0.00 4.12
6060 6599 6.598064 GCTACACTGTAGAAATATGTTTGGGT 59.402 38.462 18.78 0.00 0.00 4.51
6061 6600 6.817765 ACACTGTAGAAATATGTTTGGGTG 57.182 37.500 0.00 0.00 0.00 4.61
6062 6601 5.183140 ACACTGTAGAAATATGTTTGGGTGC 59.817 40.000 0.00 0.00 0.00 5.01
6063 6602 5.415701 CACTGTAGAAATATGTTTGGGTGCT 59.584 40.000 0.00 0.00 0.00 4.40
6064 6603 5.648092 ACTGTAGAAATATGTTTGGGTGCTC 59.352 40.000 0.00 0.00 0.00 4.26
6065 6604 5.565509 TGTAGAAATATGTTTGGGTGCTCA 58.434 37.500 0.00 0.00 0.00 4.26
6066 6605 6.186957 TGTAGAAATATGTTTGGGTGCTCAT 58.813 36.000 0.00 0.00 0.00 2.90
6067 6606 5.587388 AGAAATATGTTTGGGTGCTCATG 57.413 39.130 0.00 0.00 0.00 3.07
6068 6607 5.263599 AGAAATATGTTTGGGTGCTCATGA 58.736 37.500 0.00 0.00 0.00 3.07
6069 6608 5.895534 AGAAATATGTTTGGGTGCTCATGAT 59.104 36.000 0.00 0.00 0.00 2.45
6070 6609 7.062322 AGAAATATGTTTGGGTGCTCATGATA 58.938 34.615 0.00 0.00 0.00 2.15
6071 6610 6.889301 AATATGTTTGGGTGCTCATGATAG 57.111 37.500 0.00 0.00 0.00 2.08
6072 6611 3.998913 TGTTTGGGTGCTCATGATAGA 57.001 42.857 0.00 0.00 0.00 1.98
6073 6612 3.609853 TGTTTGGGTGCTCATGATAGAC 58.390 45.455 0.00 0.00 0.00 2.59
6074 6613 2.945668 GTTTGGGTGCTCATGATAGACC 59.054 50.000 0.00 2.57 0.00 3.85
6075 6614 2.180946 TGGGTGCTCATGATAGACCT 57.819 50.000 14.41 0.00 0.00 3.85
6076 6615 1.764723 TGGGTGCTCATGATAGACCTG 59.235 52.381 14.41 0.00 0.00 4.00
6077 6616 2.042464 GGGTGCTCATGATAGACCTGA 58.958 52.381 14.41 0.00 0.00 3.86
6078 6617 2.036992 GGGTGCTCATGATAGACCTGAG 59.963 54.545 14.41 0.00 41.79 3.35
6079 6618 2.697751 GGTGCTCATGATAGACCTGAGT 59.302 50.000 0.00 0.00 41.24 3.41
6080 6619 3.492309 GGTGCTCATGATAGACCTGAGTG 60.492 52.174 0.00 0.00 41.24 3.51
6081 6620 2.102084 TGCTCATGATAGACCTGAGTGC 59.898 50.000 0.00 0.00 41.24 4.40
6082 6621 2.364970 GCTCATGATAGACCTGAGTGCT 59.635 50.000 0.00 0.00 41.24 4.40
6083 6622 3.552684 GCTCATGATAGACCTGAGTGCTC 60.553 52.174 0.00 0.00 41.24 4.26
6084 6623 3.635591 TCATGATAGACCTGAGTGCTCA 58.364 45.455 1.69 1.69 38.06 4.26
6085 6624 4.221530 TCATGATAGACCTGAGTGCTCAT 58.778 43.478 2.06 0.00 39.13 2.90
6086 6625 4.038883 TCATGATAGACCTGAGTGCTCATG 59.961 45.833 2.06 2.86 39.13 3.07
6087 6626 3.635591 TGATAGACCTGAGTGCTCATGA 58.364 45.455 10.62 0.00 39.13 3.07
6088 6627 4.221530 TGATAGACCTGAGTGCTCATGAT 58.778 43.478 10.62 3.08 39.13 2.45
6089 6628 4.652881 TGATAGACCTGAGTGCTCATGATT 59.347 41.667 10.62 2.58 39.13 2.57
6090 6629 5.835280 TGATAGACCTGAGTGCTCATGATTA 59.165 40.000 10.62 4.27 39.13 1.75
6091 6630 4.669206 AGACCTGAGTGCTCATGATTAG 57.331 45.455 10.62 0.00 39.13 1.73
6092 6631 4.029520 AGACCTGAGTGCTCATGATTAGT 58.970 43.478 10.62 0.00 39.13 2.24
6093 6632 4.099266 AGACCTGAGTGCTCATGATTAGTC 59.901 45.833 10.62 1.64 39.13 2.59
6094 6633 3.133721 ACCTGAGTGCTCATGATTAGTCC 59.866 47.826 10.62 0.00 39.13 3.85
6095 6634 3.387374 CCTGAGTGCTCATGATTAGTCCT 59.613 47.826 0.00 0.00 39.13 3.85
6096 6635 4.370049 CTGAGTGCTCATGATTAGTCCTG 58.630 47.826 0.00 0.00 39.13 3.86
6097 6636 3.133542 TGAGTGCTCATGATTAGTCCTGG 59.866 47.826 0.00 0.00 34.14 4.45
6098 6637 2.158842 AGTGCTCATGATTAGTCCTGGC 60.159 50.000 0.00 0.00 0.00 4.85
6099 6638 1.141657 TGCTCATGATTAGTCCTGGCC 59.858 52.381 0.00 0.00 0.00 5.36
6100 6639 1.141657 GCTCATGATTAGTCCTGGCCA 59.858 52.381 4.71 4.71 0.00 5.36
6101 6640 2.224719 GCTCATGATTAGTCCTGGCCAT 60.225 50.000 5.51 0.00 0.00 4.40
6102 6641 3.672808 CTCATGATTAGTCCTGGCCATC 58.327 50.000 5.51 0.00 0.00 3.51
6103 6642 3.321039 TCATGATTAGTCCTGGCCATCT 58.679 45.455 5.51 8.22 0.00 2.90
6104 6643 3.326006 TCATGATTAGTCCTGGCCATCTC 59.674 47.826 5.51 0.00 0.00 2.75
6105 6644 2.050144 TGATTAGTCCTGGCCATCTCC 58.950 52.381 5.51 0.00 0.00 3.71
6106 6645 1.001406 GATTAGTCCTGGCCATCTCCG 59.999 57.143 5.51 0.00 0.00 4.63
6107 6646 1.048724 TTAGTCCTGGCCATCTCCGG 61.049 60.000 5.51 3.08 0.00 5.14
6123 6662 2.520982 GGCCCGGCCCTAAAATCC 60.521 66.667 18.83 0.00 44.06 3.01
6124 6663 2.277404 GCCCGGCCCTAAAATCCA 59.723 61.111 0.00 0.00 0.00 3.41
6125 6664 1.828224 GCCCGGCCCTAAAATCCAG 60.828 63.158 0.00 0.00 0.00 3.86
6126 6665 1.152756 CCCGGCCCTAAAATCCAGG 60.153 63.158 0.00 0.00 0.00 4.45
6133 6672 3.229697 CCCTAAAATCCAGGGCTTAGG 57.770 52.381 12.22 12.22 46.27 2.69
6134 6673 2.587522 CCTAAAATCCAGGGCTTAGGC 58.412 52.381 0.00 0.00 35.36 3.93
6177 6716 2.732289 GCTTGGGCCTGAGTTTTGA 58.268 52.632 4.53 0.00 0.00 2.69
6178 6717 0.600057 GCTTGGGCCTGAGTTTTGAG 59.400 55.000 4.53 0.00 0.00 3.02
6179 6718 0.600057 CTTGGGCCTGAGTTTTGAGC 59.400 55.000 4.53 0.00 0.00 4.26
6180 6719 0.827507 TTGGGCCTGAGTTTTGAGCC 60.828 55.000 4.53 0.00 43.09 4.70
6181 6720 3.686760 GGCCTGAGTTTTGAGCCC 58.313 61.111 0.00 0.00 37.66 5.19
6182 6721 1.228552 GGCCTGAGTTTTGAGCCCA 60.229 57.895 0.00 0.00 37.66 5.36
6183 6722 1.527433 GGCCTGAGTTTTGAGCCCAC 61.527 60.000 0.00 0.00 37.66 4.61
6184 6723 1.527433 GCCTGAGTTTTGAGCCCACC 61.527 60.000 0.00 0.00 0.00 4.61
6185 6724 0.178992 CCTGAGTTTTGAGCCCACCA 60.179 55.000 0.00 0.00 0.00 4.17
6186 6725 1.242076 CTGAGTTTTGAGCCCACCAG 58.758 55.000 0.00 0.00 0.00 4.00
6187 6726 0.823356 TGAGTTTTGAGCCCACCAGC 60.823 55.000 0.00 0.00 0.00 4.85
6188 6727 0.823356 GAGTTTTGAGCCCACCAGCA 60.823 55.000 0.00 0.00 34.23 4.41
6189 6728 0.825010 AGTTTTGAGCCCACCAGCAG 60.825 55.000 0.00 0.00 34.23 4.24
6190 6729 1.531365 TTTTGAGCCCACCAGCAGG 60.531 57.895 0.00 0.00 42.21 4.85
6210 6749 4.351054 CTGGACGGGCTTGGGCTT 62.351 66.667 0.00 0.00 38.73 4.35
6211 6750 4.659172 TGGACGGGCTTGGGCTTG 62.659 66.667 0.00 0.00 38.73 4.01
6216 6755 2.043046 GGGCTTGGGCTTGGCATA 60.043 61.111 0.00 0.00 38.73 3.14
6217 6756 1.458209 GGGCTTGGGCTTGGCATAT 60.458 57.895 0.00 0.00 38.73 1.78
6218 6757 1.050421 GGGCTTGGGCTTGGCATATT 61.050 55.000 0.00 0.00 38.73 1.28
6219 6758 0.105408 GGCTTGGGCTTGGCATATTG 59.895 55.000 0.00 0.00 38.73 1.90
6220 6759 0.105408 GCTTGGGCTTGGCATATTGG 59.895 55.000 0.00 0.00 35.22 3.16
6221 6760 0.105408 CTTGGGCTTGGCATATTGGC 59.895 55.000 0.00 0.00 44.03 4.52
6234 6773 6.160576 GGCATATTGGCATTTTAAGGAAGA 57.839 37.500 0.00 0.00 43.14 2.87
6235 6774 6.218746 GGCATATTGGCATTTTAAGGAAGAG 58.781 40.000 0.00 0.00 43.14 2.85
6236 6775 6.218746 GCATATTGGCATTTTAAGGAAGAGG 58.781 40.000 0.00 0.00 0.00 3.69
6237 6776 4.743057 ATTGGCATTTTAAGGAAGAGGC 57.257 40.909 0.00 0.00 0.00 4.70
6238 6777 2.456577 TGGCATTTTAAGGAAGAGGCC 58.543 47.619 0.00 0.00 40.51 5.19
6239 6778 1.757118 GGCATTTTAAGGAAGAGGCCC 59.243 52.381 0.00 0.00 34.17 5.80
6240 6779 1.405463 GCATTTTAAGGAAGAGGCCCG 59.595 52.381 0.00 0.00 0.00 6.13
6241 6780 2.024414 CATTTTAAGGAAGAGGCCCGG 58.976 52.381 0.00 0.00 0.00 5.73
6242 6781 0.323087 TTTTAAGGAAGAGGCCCGGC 60.323 55.000 0.00 0.00 0.00 6.13
6276 6815 3.821421 CCCTAAGGGCTACACTGTAAG 57.179 52.381 0.00 0.00 35.35 2.34
6277 6816 2.158943 CCCTAAGGGCTACACTGTAAGC 60.159 54.545 5.91 5.91 33.84 3.09
6278 6817 2.766828 CCTAAGGGCTACACTGTAAGCT 59.233 50.000 12.38 0.00 37.60 3.74
6279 6818 3.958798 CCTAAGGGCTACACTGTAAGCTA 59.041 47.826 12.38 0.21 37.60 3.32
6280 6819 3.889520 AAGGGCTACACTGTAAGCTAC 57.110 47.619 12.38 7.48 37.60 3.58
6281 6820 2.816411 AGGGCTACACTGTAAGCTACA 58.184 47.619 12.38 0.00 37.60 2.74
6282 6821 2.496470 AGGGCTACACTGTAAGCTACAC 59.504 50.000 12.38 0.00 37.60 2.90
6283 6822 2.496470 GGGCTACACTGTAAGCTACACT 59.504 50.000 12.38 0.00 37.60 3.55
6284 6823 3.512680 GGCTACACTGTAAGCTACACTG 58.487 50.000 12.38 0.00 37.60 3.66
6285 6824 3.056749 GGCTACACTGTAAGCTACACTGT 60.057 47.826 12.38 5.42 38.59 3.55
6286 6825 4.157289 GGCTACACTGTAAGCTACACTGTA 59.843 45.833 12.38 10.69 37.11 2.74
6287 6826 5.333513 GCTACACTGTAAGCTACACTGTAG 58.666 45.833 21.80 21.80 46.83 2.74
6288 6827 5.123502 GCTACACTGTAAGCTACACTGTAGA 59.876 44.000 25.54 13.40 46.94 2.59
6289 6828 6.349115 GCTACACTGTAAGCTACACTGTAGAA 60.349 42.308 25.54 2.05 46.94 2.10
6290 6829 6.401047 ACACTGTAAGCTACACTGTAGAAA 57.599 37.500 18.78 1.73 37.60 2.52
6291 6830 6.994221 ACACTGTAAGCTACACTGTAGAAAT 58.006 36.000 18.78 7.10 37.60 2.17
6292 6831 8.118976 ACACTGTAAGCTACACTGTAGAAATA 57.881 34.615 18.78 6.26 37.60 1.40
6322 6861 7.696035 CGATGGATTTCGATAGTCTGAATCTAG 59.304 40.741 4.31 0.00 41.62 2.43
6413 6952 2.859032 GCATCTAGCGACTCGGTTTAGG 60.859 54.545 8.69 0.78 38.83 2.69
6500 7039 6.173339 AGGGTATATAATGTTGAGAATGGCG 58.827 40.000 0.00 0.00 0.00 5.69
6501 7040 5.938125 GGGTATATAATGTTGAGAATGGCGT 59.062 40.000 0.00 0.00 0.00 5.68
6545 7084 8.389779 TGGAGCCCTTTATTTTTGAAAAATTC 57.610 30.769 19.57 9.97 0.00 2.17
6546 7085 7.995488 TGGAGCCCTTTATTTTTGAAAAATTCA 59.005 29.630 19.57 6.12 38.04 2.57
6610 7161 9.595823 AATATGCGTATATGTAAGGATGTAACC 57.404 33.333 6.78 0.00 30.00 2.85
6626 7177 6.716934 ATGTAACCCACATGTGTGTAAAAA 57.283 33.333 23.79 7.03 46.41 1.94
6631 7182 6.418057 ACCCACATGTGTGTAAAAATTCAT 57.582 33.333 23.79 0.00 44.21 2.57
6633 7184 6.041409 ACCCACATGTGTGTAAAAATTCATGA 59.959 34.615 23.79 0.00 44.21 3.07
6634 7185 7.098477 CCCACATGTGTGTAAAAATTCATGAT 58.902 34.615 23.79 0.00 44.21 2.45
6635 7186 7.063662 CCCACATGTGTGTAAAAATTCATGATG 59.936 37.037 23.79 2.46 44.21 3.07
6651 7202 8.882415 ATTCATGATGAAATACCTTGAATTGC 57.118 30.769 12.36 0.00 40.12 3.56
6653 7204 6.318396 TCATGATGAAATACCTTGAATTGCGA 59.682 34.615 0.00 0.00 0.00 5.10
6654 7205 5.879237 TGATGAAATACCTTGAATTGCGAC 58.121 37.500 0.00 0.00 0.00 5.19
6659 7210 2.851263 ACCTTGAATTGCGACCTGTA 57.149 45.000 0.00 0.00 0.00 2.74
6684 7235 5.549742 AAAAAGACAAATTCATGGCCTGA 57.450 34.783 3.32 2.06 0.00 3.86
6685 7236 4.796038 AAAGACAAATTCATGGCCTGAG 57.204 40.909 3.32 0.00 34.68 3.35
6686 7237 3.726557 AGACAAATTCATGGCCTGAGA 57.273 42.857 3.32 0.00 34.68 3.27
6687 7238 3.618351 AGACAAATTCATGGCCTGAGAG 58.382 45.455 3.32 0.00 34.68 3.20
6688 7239 3.265221 AGACAAATTCATGGCCTGAGAGA 59.735 43.478 3.32 0.00 34.68 3.10
6689 7240 4.012374 GACAAATTCATGGCCTGAGAGAA 58.988 43.478 3.32 1.18 34.68 2.87
6690 7241 4.607239 ACAAATTCATGGCCTGAGAGAAT 58.393 39.130 3.32 3.67 34.68 2.40
6691 7242 4.401519 ACAAATTCATGGCCTGAGAGAATG 59.598 41.667 3.32 0.00 34.68 2.67
6692 7243 4.515028 AATTCATGGCCTGAGAGAATGA 57.485 40.909 3.32 0.00 34.68 2.57
6693 7244 4.515028 ATTCATGGCCTGAGAGAATGAA 57.485 40.909 13.08 13.08 40.45 2.57
6694 7245 4.515028 TTCATGGCCTGAGAGAATGAAT 57.485 40.909 3.32 0.00 33.50 2.57
6695 7246 5.635278 TTCATGGCCTGAGAGAATGAATA 57.365 39.130 3.32 0.00 33.50 1.75
6696 7247 5.224821 TCATGGCCTGAGAGAATGAATAG 57.775 43.478 3.32 0.00 0.00 1.73
6697 7248 4.657504 TCATGGCCTGAGAGAATGAATAGT 59.342 41.667 3.32 0.00 0.00 2.12
6698 7249 5.840693 TCATGGCCTGAGAGAATGAATAGTA 59.159 40.000 3.32 0.00 0.00 1.82
6699 7250 6.499699 TCATGGCCTGAGAGAATGAATAGTAT 59.500 38.462 3.32 0.00 0.00 2.12
6700 7251 6.352016 TGGCCTGAGAGAATGAATAGTATC 57.648 41.667 3.32 0.00 0.00 2.24
6701 7252 5.840693 TGGCCTGAGAGAATGAATAGTATCA 59.159 40.000 3.32 0.00 0.00 2.15
6702 7253 6.499699 TGGCCTGAGAGAATGAATAGTATCAT 59.500 38.462 3.32 0.00 41.74 2.45
6703 7254 6.817641 GGCCTGAGAGAATGAATAGTATCATG 59.182 42.308 0.00 0.00 39.90 3.07
6704 7255 7.385267 GCCTGAGAGAATGAATAGTATCATGT 58.615 38.462 0.00 0.00 39.90 3.21
6705 7256 7.331440 GCCTGAGAGAATGAATAGTATCATGTG 59.669 40.741 0.00 0.00 39.90 3.21
6706 7257 8.366401 CCTGAGAGAATGAATAGTATCATGTGT 58.634 37.037 0.00 0.00 39.90 3.72
6707 7258 9.761504 CTGAGAGAATGAATAGTATCATGTGTT 57.238 33.333 0.00 0.00 39.90 3.32
6715 7266 8.208718 TGAATAGTATCATGTGTTAAACAGCC 57.791 34.615 0.00 0.00 43.64 4.85
6716 7267 7.282224 TGAATAGTATCATGTGTTAAACAGCCC 59.718 37.037 0.00 0.00 43.64 5.19
6717 7268 5.179452 AGTATCATGTGTTAAACAGCCCT 57.821 39.130 0.00 0.00 43.64 5.19
6718 7269 6.308015 AGTATCATGTGTTAAACAGCCCTA 57.692 37.500 0.00 0.00 43.64 3.53
6719 7270 6.349300 AGTATCATGTGTTAAACAGCCCTAG 58.651 40.000 0.00 0.00 43.64 3.02
6720 7271 4.901197 TCATGTGTTAAACAGCCCTAGA 57.099 40.909 0.00 0.00 43.64 2.43
6721 7272 5.435686 TCATGTGTTAAACAGCCCTAGAT 57.564 39.130 0.00 0.00 43.64 1.98
6722 7273 5.815581 TCATGTGTTAAACAGCCCTAGATT 58.184 37.500 0.00 0.00 43.64 2.40
6723 7274 6.245408 TCATGTGTTAAACAGCCCTAGATTT 58.755 36.000 0.00 0.00 43.64 2.17
6724 7275 5.957842 TGTGTTAAACAGCCCTAGATTTG 57.042 39.130 0.00 0.00 33.78 2.32
6725 7276 5.381757 TGTGTTAAACAGCCCTAGATTTGT 58.618 37.500 0.00 0.00 33.78 2.83
6726 7277 5.472137 TGTGTTAAACAGCCCTAGATTTGTC 59.528 40.000 0.00 0.00 33.78 3.18
6727 7278 5.705905 GTGTTAAACAGCCCTAGATTTGTCT 59.294 40.000 0.00 0.00 0.00 3.41
6728 7279 6.206829 GTGTTAAACAGCCCTAGATTTGTCTT 59.793 38.462 0.00 0.00 0.00 3.01
6729 7280 6.775629 TGTTAAACAGCCCTAGATTTGTCTTT 59.224 34.615 0.00 0.00 0.00 2.52
6730 7281 7.286775 TGTTAAACAGCCCTAGATTTGTCTTTT 59.713 33.333 0.00 0.00 0.00 2.27
6731 7282 6.731292 AAACAGCCCTAGATTTGTCTTTTT 57.269 33.333 0.00 0.00 0.00 1.94
6748 7299 2.818130 TTTTGCACAGCCCTCATTTC 57.182 45.000 0.00 0.00 0.00 2.17
6749 7300 1.702182 TTTGCACAGCCCTCATTTCA 58.298 45.000 0.00 0.00 0.00 2.69
6750 7301 1.702182 TTGCACAGCCCTCATTTCAA 58.298 45.000 0.00 0.00 0.00 2.69
6751 7302 0.961019 TGCACAGCCCTCATTTCAAC 59.039 50.000 0.00 0.00 0.00 3.18
6752 7303 0.109597 GCACAGCCCTCATTTCAACG 60.110 55.000 0.00 0.00 0.00 4.10
6753 7304 1.238439 CACAGCCCTCATTTCAACGT 58.762 50.000 0.00 0.00 0.00 3.99
6754 7305 2.422597 CACAGCCCTCATTTCAACGTA 58.577 47.619 0.00 0.00 0.00 3.57
6755 7306 3.009723 CACAGCCCTCATTTCAACGTAT 58.990 45.455 0.00 0.00 0.00 3.06
6756 7307 3.440173 CACAGCCCTCATTTCAACGTATT 59.560 43.478 0.00 0.00 0.00 1.89
6757 7308 4.079253 ACAGCCCTCATTTCAACGTATTT 58.921 39.130 0.00 0.00 0.00 1.40
6758 7309 4.522789 ACAGCCCTCATTTCAACGTATTTT 59.477 37.500 0.00 0.00 0.00 1.82
6759 7310 4.858692 CAGCCCTCATTTCAACGTATTTTG 59.141 41.667 0.00 0.00 0.00 2.44
6760 7311 3.612423 GCCCTCATTTCAACGTATTTTGC 59.388 43.478 0.00 0.00 0.00 3.68
6761 7312 4.173256 CCCTCATTTCAACGTATTTTGCC 58.827 43.478 0.00 0.00 0.00 4.52
6762 7313 4.173256 CCTCATTTCAACGTATTTTGCCC 58.827 43.478 0.00 0.00 0.00 5.36
6763 7314 4.082245 CCTCATTTCAACGTATTTTGCCCT 60.082 41.667 0.00 0.00 0.00 5.19
6764 7315 4.804108 TCATTTCAACGTATTTTGCCCTG 58.196 39.130 0.00 0.00 0.00 4.45
6765 7316 4.520874 TCATTTCAACGTATTTTGCCCTGA 59.479 37.500 0.00 0.00 0.00 3.86
6766 7317 4.920640 TTTCAACGTATTTTGCCCTGAA 57.079 36.364 0.00 0.00 0.00 3.02
6767 7318 4.920640 TTCAACGTATTTTGCCCTGAAA 57.079 36.364 0.00 0.00 0.00 2.69
6768 7319 4.920640 TCAACGTATTTTGCCCTGAAAA 57.079 36.364 0.00 0.00 0.00 2.29
6769 7320 5.461032 TCAACGTATTTTGCCCTGAAAAT 57.539 34.783 0.00 0.00 38.69 1.82
6770 7321 5.848406 TCAACGTATTTTGCCCTGAAAATT 58.152 33.333 0.00 0.00 36.94 1.82
6771 7322 6.284459 TCAACGTATTTTGCCCTGAAAATTT 58.716 32.000 0.00 0.00 36.94 1.82
6772 7323 7.434492 TCAACGTATTTTGCCCTGAAAATTTA 58.566 30.769 0.00 0.00 36.94 1.40
6773 7324 7.382759 TCAACGTATTTTGCCCTGAAAATTTAC 59.617 33.333 0.00 0.00 36.94 2.01
6774 7325 6.750148 ACGTATTTTGCCCTGAAAATTTACA 58.250 32.000 0.00 0.00 36.94 2.41
6775 7326 6.643360 ACGTATTTTGCCCTGAAAATTTACAC 59.357 34.615 0.00 0.00 36.94 2.90
6776 7327 6.642950 CGTATTTTGCCCTGAAAATTTACACA 59.357 34.615 0.00 0.00 36.94 3.72
6777 7328 6.859420 ATTTTGCCCTGAAAATTTACACAC 57.141 33.333 0.00 0.00 32.70 3.82
6778 7329 5.344743 TTTGCCCTGAAAATTTACACACA 57.655 34.783 0.00 0.00 0.00 3.72
6779 7330 5.543507 TTGCCCTGAAAATTTACACACAT 57.456 34.783 0.00 0.00 0.00 3.21
6780 7331 4.880759 TGCCCTGAAAATTTACACACATG 58.119 39.130 0.00 0.00 0.00 3.21
6781 7332 4.343526 TGCCCTGAAAATTTACACACATGT 59.656 37.500 0.00 0.00 43.30 3.21
6796 7347 4.707030 CACATGTGTGTTATGCCTTCAT 57.293 40.909 18.03 0.00 40.96 2.57
6797 7348 4.417506 CACATGTGTGTTATGCCTTCATG 58.582 43.478 18.03 0.00 40.96 3.07
6798 7349 4.081406 ACATGTGTGTTATGCCTTCATGT 58.919 39.130 0.00 0.00 39.25 3.21
6799 7350 5.123661 CACATGTGTGTTATGCCTTCATGTA 59.876 40.000 18.03 0.00 41.14 2.29
6800 7351 5.887598 ACATGTGTGTTATGCCTTCATGTAT 59.112 36.000 0.00 0.00 41.23 2.29
6801 7352 7.012232 CACATGTGTGTTATGCCTTCATGTATA 59.988 37.037 18.03 0.00 41.14 1.47
6802 7353 7.227314 ACATGTGTGTTATGCCTTCATGTATAG 59.773 37.037 0.00 0.00 41.23 1.31
6803 7354 5.527214 TGTGTGTTATGCCTTCATGTATAGC 59.473 40.000 0.00 0.00 34.22 2.97
6804 7355 5.760253 GTGTGTTATGCCTTCATGTATAGCT 59.240 40.000 0.00 0.00 34.22 3.32
6805 7356 5.759763 TGTGTTATGCCTTCATGTATAGCTG 59.240 40.000 0.00 0.00 34.22 4.24
6806 7357 5.760253 GTGTTATGCCTTCATGTATAGCTGT 59.240 40.000 0.00 0.00 34.22 4.40
6807 7358 5.759763 TGTTATGCCTTCATGTATAGCTGTG 59.240 40.000 0.00 0.00 34.22 3.66
6808 7359 3.912496 TGCCTTCATGTATAGCTGTGT 57.088 42.857 0.00 0.00 0.00 3.72
6809 7360 4.220693 TGCCTTCATGTATAGCTGTGTT 57.779 40.909 0.00 0.00 0.00 3.32
6810 7361 4.588899 TGCCTTCATGTATAGCTGTGTTT 58.411 39.130 0.00 0.00 0.00 2.83
6811 7362 5.009631 TGCCTTCATGTATAGCTGTGTTTT 58.990 37.500 0.00 0.00 0.00 2.43
6812 7363 5.476599 TGCCTTCATGTATAGCTGTGTTTTT 59.523 36.000 0.00 0.00 0.00 1.94
6877 7428 8.351461 TGAAATTTGAAATTTGAATTTGGAGGC 58.649 29.630 19.47 2.72 38.64 4.70
6878 7429 6.822667 ATTTGAAATTTGAATTTGGAGGCC 57.177 33.333 6.44 0.00 38.64 5.19
6879 7430 5.565455 TTGAAATTTGAATTTGGAGGCCT 57.435 34.783 3.86 3.86 38.64 5.19
6880 7431 5.151297 TGAAATTTGAATTTGGAGGCCTC 57.849 39.130 25.59 25.59 38.64 4.70
6881 7432 4.592351 TGAAATTTGAATTTGGAGGCCTCA 59.408 37.500 33.29 17.15 38.64 3.86
6882 7433 5.248934 TGAAATTTGAATTTGGAGGCCTCAT 59.751 36.000 33.29 16.40 38.64 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 5.069383 CCCATATCTGCATCAATTTGGACAA 59.931 40.000 12.10 0.00 0.00 3.18
9 10 4.585581 CCCATATCTGCATCAATTTGGACA 59.414 41.667 12.10 0.00 0.00 4.02
11 12 3.575256 GCCCATATCTGCATCAATTTGGA 59.425 43.478 12.10 0.00 0.00 3.53
24 25 2.047061 TCGCTAGTTTGGCCCATATCT 58.953 47.619 0.00 0.00 0.00 1.98
27 28 0.179468 GGTCGCTAGTTTGGCCCATA 59.821 55.000 0.00 0.00 0.00 2.74
31 32 1.302993 TTGGGTCGCTAGTTTGGCC 60.303 57.895 0.00 0.00 0.00 5.36
33 34 1.156736 CTGTTGGGTCGCTAGTTTGG 58.843 55.000 0.00 0.00 0.00 3.28
40 41 1.757682 TTTTTGTCTGTTGGGTCGCT 58.242 45.000 0.00 0.00 0.00 4.93
83 85 4.072088 CAACTCCAACGCGCCGAC 62.072 66.667 5.73 0.00 0.00 4.79
88 90 1.635663 CTAAGGCCAACTCCAACGCG 61.636 60.000 5.01 3.53 0.00 6.01
91 93 3.412237 TGTACTAAGGCCAACTCCAAC 57.588 47.619 5.01 0.00 0.00 3.77
166 168 6.292703 GCTTAGCGTTGTAGTTGAAGAAGAAA 60.293 38.462 0.00 0.00 0.00 2.52
191 193 2.751166 ACAGGGAAATCACTCTGTCG 57.249 50.000 0.00 0.00 35.83 4.35
196 198 4.584743 AGAAACCAAACAGGGAAATCACTC 59.415 41.667 0.00 0.00 43.89 3.51
199 201 4.803452 AGAGAAACCAAACAGGGAAATCA 58.197 39.130 0.00 0.00 43.89 2.57
209 211 7.576750 AAACGAAAGAAAAGAGAAACCAAAC 57.423 32.000 0.00 0.00 0.00 2.93
220 222 3.001228 GGGCAAGCAAAACGAAAGAAAAG 59.999 43.478 0.00 0.00 0.00 2.27
225 227 0.939106 CCGGGCAAGCAAAACGAAAG 60.939 55.000 0.00 0.00 0.00 2.62
227 229 2.725008 CCGGGCAAGCAAAACGAA 59.275 55.556 0.00 0.00 0.00 3.85
228 230 3.291383 CCCGGGCAAGCAAAACGA 61.291 61.111 8.08 0.00 0.00 3.85
343 345 9.001542 TCATGGATTTAAAAAGCATTCAAAAGG 57.998 29.630 0.00 0.00 0.00 3.11
367 369 9.487790 AAGTTTGTCAAATTTGAAAAGAGTTCA 57.512 25.926 22.07 10.58 39.21 3.18
499 503 7.162385 GCATCAATTTTGAAAAACAAGTTCACG 59.838 33.333 0.00 0.00 41.13 4.35
644 648 6.564709 AAGGTCCACGGTAATTTAGAAAAC 57.435 37.500 0.00 0.00 0.00 2.43
648 652 6.117975 AGAAAAGGTCCACGGTAATTTAGA 57.882 37.500 0.00 0.00 0.00 2.10
649 653 7.910441 TTAGAAAAGGTCCACGGTAATTTAG 57.090 36.000 0.00 0.00 0.00 1.85
650 654 8.866970 AATTAGAAAAGGTCCACGGTAATTTA 57.133 30.769 0.00 0.00 0.00 1.40
815 835 1.580893 CATTGGTTCGCATCGCACG 60.581 57.895 0.00 0.00 0.00 5.34
877 897 0.170561 GCTTCCTAGTCGCGTTCTGA 59.829 55.000 5.77 0.00 0.00 3.27
1311 1351 3.236632 GCAGGGAGCAAGTAAATTTGG 57.763 47.619 0.00 0.00 44.79 3.28
1503 1544 7.550597 AGATCAGTCAGATGCCATATCTAAA 57.449 36.000 0.00 0.00 37.00 1.85
1505 1546 7.148171 CGTTAGATCAGTCAGATGCCATATCTA 60.148 40.741 0.00 0.00 37.00 1.98
1909 1989 2.750637 GTCGAGGAGTGGCGGAGA 60.751 66.667 0.00 0.00 0.00 3.71
2329 2491 2.490217 CTACCTCAGCGTCCGGTG 59.510 66.667 12.31 12.31 44.11 4.94
2378 2558 1.522806 CGATCCGCCGATTTCCCAA 60.523 57.895 0.00 0.00 0.00 4.12
2652 2882 1.609635 TTACTCGGCCGCAATCTCCA 61.610 55.000 23.51 0.00 0.00 3.86
2714 2955 3.120108 TCCCCAATAACTGGTTAGAGGG 58.880 50.000 18.30 18.30 44.76 4.30
2724 2993 5.703730 TTTCTAACCGATCCCCAATAACT 57.296 39.130 0.00 0.00 0.00 2.24
2827 3096 7.038302 TCAGTACCAGAATGACCATAAAAGAGT 60.038 37.037 0.00 0.00 39.69 3.24
2830 3099 7.106239 AGTCAGTACCAGAATGACCATAAAAG 58.894 38.462 8.20 0.00 43.47 2.27
2870 3139 7.392393 ACGGAAAAATACCATTAACTACTGCTT 59.608 33.333 0.00 0.00 0.00 3.91
2914 3184 8.591940 AGCATGAGCATCTCTACAATAAGAATA 58.408 33.333 0.00 0.00 45.49 1.75
3844 4130 5.501156 ACCAAATCTTCCTCAATCAGGTAC 58.499 41.667 0.00 0.00 43.95 3.34
4182 4667 1.830477 GCAGAGATTGAGTGAGGAGGT 59.170 52.381 0.00 0.00 0.00 3.85
4753 5267 1.115326 AGGGCCAAAAACCTGCACTC 61.115 55.000 6.18 0.00 31.95 3.51
4767 5281 0.387565 TCTTCGCAAACAAAAGGGCC 59.612 50.000 0.00 0.00 0.00 5.80
4933 5448 2.280628 GTGCTACAAATCCTCTTCCCG 58.719 52.381 0.00 0.00 0.00 5.14
5016 5535 7.288621 AGGTTTCATATTCCAAAATCCCAGATC 59.711 37.037 0.00 0.00 0.00 2.75
5079 5598 5.064707 CCACAGATACGTTTCCTGGTATTTG 59.935 44.000 13.52 0.00 37.30 2.32
5213 5733 6.338937 ACTCCCGTATGAAGTTATGAAGTTC 58.661 40.000 0.00 0.00 40.47 3.01
5221 5741 4.885907 CCAGTCTACTCCCGTATGAAGTTA 59.114 45.833 0.00 0.00 0.00 2.24
5222 5742 3.700038 CCAGTCTACTCCCGTATGAAGTT 59.300 47.826 0.00 0.00 0.00 2.66
5223 5743 3.288964 CCAGTCTACTCCCGTATGAAGT 58.711 50.000 0.00 0.00 0.00 3.01
5224 5744 2.623889 CCCAGTCTACTCCCGTATGAAG 59.376 54.545 0.00 0.00 0.00 3.02
5225 5745 2.662866 CCCAGTCTACTCCCGTATGAA 58.337 52.381 0.00 0.00 0.00 2.57
5226 5746 1.753141 GCCCAGTCTACTCCCGTATGA 60.753 57.143 0.00 0.00 0.00 2.15
5227 5747 0.674534 GCCCAGTCTACTCCCGTATG 59.325 60.000 0.00 0.00 0.00 2.39
5228 5748 0.260816 TGCCCAGTCTACTCCCGTAT 59.739 55.000 0.00 0.00 0.00 3.06
5250 5770 8.103948 ACTGAAATCTTGGACTATCAAACTTG 57.896 34.615 0.00 0.00 0.00 3.16
5251 5771 8.697507 AACTGAAATCTTGGACTATCAAACTT 57.302 30.769 0.00 0.00 0.00 2.66
5492 6015 8.693542 AAAGCAATATACATGCAGAGAAAAAC 57.306 30.769 13.22 0.00 46.22 2.43
5514 6037 5.174395 CACAGGGAGAGTATGAGTTGAAAG 58.826 45.833 0.00 0.00 0.00 2.62
5565 6088 6.146347 GCTTGTCTAGTTCTGTAGAAACCAAG 59.854 42.308 0.00 5.99 35.61 3.61
5575 6098 5.717178 TCTCCAATAGCTTGTCTAGTTCTGT 59.283 40.000 0.00 0.00 0.00 3.41
5682 6205 7.598759 ATCTATACGTCTTTGTATGGACCTT 57.401 36.000 0.00 0.00 42.64 3.50
5837 6360 4.093998 ACACGAGATGAATGATCTGCAAAC 59.906 41.667 0.00 0.00 41.91 2.93
5940 6479 7.147759 ACCCATACATATATCAGCTGAGATGAC 60.148 40.741 29.55 0.00 0.00 3.06
6005 6544 3.324846 GGTCTATCATGAGCACCCATACA 59.675 47.826 0.09 0.00 34.88 2.29
6006 6545 3.615110 CGGTCTATCATGAGCACCCATAC 60.615 52.174 12.65 0.00 34.46 2.39
6007 6546 2.562738 CGGTCTATCATGAGCACCCATA 59.437 50.000 12.65 0.00 34.46 2.74
6008 6547 1.345741 CGGTCTATCATGAGCACCCAT 59.654 52.381 12.65 0.00 34.46 4.00
6009 6548 0.752658 CGGTCTATCATGAGCACCCA 59.247 55.000 12.65 0.00 34.46 4.51
6010 6549 0.034059 CCGGTCTATCATGAGCACCC 59.966 60.000 12.65 5.01 34.46 4.61
6011 6550 1.000283 CTCCGGTCTATCATGAGCACC 60.000 57.143 0.00 6.02 34.46 5.01
6012 6551 1.683917 ACTCCGGTCTATCATGAGCAC 59.316 52.381 0.00 0.00 34.46 4.40
6013 6552 2.073252 ACTCCGGTCTATCATGAGCA 57.927 50.000 0.00 0.00 34.46 4.26
6014 6553 3.612955 GCTTACTCCGGTCTATCATGAGC 60.613 52.174 0.00 0.00 0.00 4.26
6015 6554 3.823873 AGCTTACTCCGGTCTATCATGAG 59.176 47.826 0.00 0.00 0.00 2.90
6016 6555 3.833732 AGCTTACTCCGGTCTATCATGA 58.166 45.455 0.00 0.00 0.00 3.07
6017 6556 4.519350 TGTAGCTTACTCCGGTCTATCATG 59.481 45.833 0.00 0.00 0.00 3.07
6018 6557 4.519730 GTGTAGCTTACTCCGGTCTATCAT 59.480 45.833 0.00 0.00 0.00 2.45
6019 6558 3.881688 GTGTAGCTTACTCCGGTCTATCA 59.118 47.826 0.00 0.00 0.00 2.15
6020 6559 4.023878 CAGTGTAGCTTACTCCGGTCTATC 60.024 50.000 0.00 0.00 0.00 2.08
6021 6560 3.884091 CAGTGTAGCTTACTCCGGTCTAT 59.116 47.826 0.00 0.00 0.00 1.98
6022 6561 3.276857 CAGTGTAGCTTACTCCGGTCTA 58.723 50.000 0.00 0.00 0.00 2.59
6023 6562 2.093106 CAGTGTAGCTTACTCCGGTCT 58.907 52.381 0.00 0.00 0.00 3.85
6024 6563 1.817447 ACAGTGTAGCTTACTCCGGTC 59.183 52.381 0.00 0.00 0.00 4.79
6025 6564 1.920610 ACAGTGTAGCTTACTCCGGT 58.079 50.000 0.00 0.00 0.00 5.28
6026 6565 3.276857 TCTACAGTGTAGCTTACTCCGG 58.723 50.000 23.14 0.00 0.00 5.14
6027 6566 4.959596 TTCTACAGTGTAGCTTACTCCG 57.040 45.455 23.14 0.16 0.00 4.63
6028 6567 8.414778 ACATATTTCTACAGTGTAGCTTACTCC 58.585 37.037 23.14 0.00 0.00 3.85
6029 6568 9.804758 AACATATTTCTACAGTGTAGCTTACTC 57.195 33.333 23.14 0.00 0.00 2.59
6032 6571 9.378551 CCAAACATATTTCTACAGTGTAGCTTA 57.621 33.333 23.14 14.68 0.00 3.09
6033 6572 7.336931 CCCAAACATATTTCTACAGTGTAGCTT 59.663 37.037 23.14 13.20 0.00 3.74
6034 6573 6.823689 CCCAAACATATTTCTACAGTGTAGCT 59.176 38.462 23.14 13.36 0.00 3.32
6035 6574 6.598064 ACCCAAACATATTTCTACAGTGTAGC 59.402 38.462 23.14 0.00 0.00 3.58
6036 6575 7.414098 GCACCCAAACATATTTCTACAGTGTAG 60.414 40.741 22.16 22.16 0.00 2.74
6037 6576 6.373216 GCACCCAAACATATTTCTACAGTGTA 59.627 38.462 2.36 2.36 0.00 2.90
6038 6577 5.183140 GCACCCAAACATATTTCTACAGTGT 59.817 40.000 0.00 0.00 0.00 3.55
6039 6578 5.415701 AGCACCCAAACATATTTCTACAGTG 59.584 40.000 0.00 0.00 0.00 3.66
6040 6579 5.570320 AGCACCCAAACATATTTCTACAGT 58.430 37.500 0.00 0.00 0.00 3.55
6041 6580 5.647658 TGAGCACCCAAACATATTTCTACAG 59.352 40.000 0.00 0.00 0.00 2.74
6042 6581 5.565509 TGAGCACCCAAACATATTTCTACA 58.434 37.500 0.00 0.00 0.00 2.74
6043 6582 6.318648 TCATGAGCACCCAAACATATTTCTAC 59.681 38.462 0.00 0.00 0.00 2.59
6044 6583 6.422333 TCATGAGCACCCAAACATATTTCTA 58.578 36.000 0.00 0.00 0.00 2.10
6045 6584 5.263599 TCATGAGCACCCAAACATATTTCT 58.736 37.500 0.00 0.00 0.00 2.52
6046 6585 5.581126 TCATGAGCACCCAAACATATTTC 57.419 39.130 0.00 0.00 0.00 2.17
6047 6586 7.013655 GTCTATCATGAGCACCCAAACATATTT 59.986 37.037 0.09 0.00 0.00 1.40
6048 6587 6.488006 GTCTATCATGAGCACCCAAACATATT 59.512 38.462 0.09 0.00 0.00 1.28
6049 6588 6.000219 GTCTATCATGAGCACCCAAACATAT 59.000 40.000 0.09 0.00 0.00 1.78
6050 6589 5.368145 GTCTATCATGAGCACCCAAACATA 58.632 41.667 0.09 0.00 0.00 2.29
6051 6590 4.202441 GTCTATCATGAGCACCCAAACAT 58.798 43.478 0.09 0.00 0.00 2.71
6052 6591 3.609853 GTCTATCATGAGCACCCAAACA 58.390 45.455 0.09 0.00 0.00 2.83
6053 6592 2.945668 GGTCTATCATGAGCACCCAAAC 59.054 50.000 0.09 0.00 34.88 2.93
6054 6593 2.846206 AGGTCTATCATGAGCACCCAAA 59.154 45.455 14.17 0.00 36.97 3.28
6055 6594 2.171237 CAGGTCTATCATGAGCACCCAA 59.829 50.000 14.17 0.00 36.97 4.12
6056 6595 1.764723 CAGGTCTATCATGAGCACCCA 59.235 52.381 14.17 0.00 36.97 4.51
6057 6596 2.036992 CTCAGGTCTATCATGAGCACCC 59.963 54.545 14.17 6.54 45.59 4.61
6058 6597 3.383620 CTCAGGTCTATCATGAGCACC 57.616 52.381 11.07 11.07 45.59 5.01
6063 6602 3.635591 TGAGCACTCAGGTCTATCATGA 58.364 45.455 0.00 0.00 44.98 3.07
6064 6603 4.038883 TCATGAGCACTCAGGTCTATCATG 59.961 45.833 11.64 6.03 44.98 3.07
6065 6604 4.221530 TCATGAGCACTCAGGTCTATCAT 58.778 43.478 11.64 0.00 44.98 2.45
6066 6605 3.635591 TCATGAGCACTCAGGTCTATCA 58.364 45.455 11.64 0.00 44.98 2.15
6067 6606 4.870123 ATCATGAGCACTCAGGTCTATC 57.130 45.455 11.64 0.00 44.98 2.08
6068 6607 5.837979 ACTAATCATGAGCACTCAGGTCTAT 59.162 40.000 11.64 0.00 44.98 1.98
6069 6608 5.204292 ACTAATCATGAGCACTCAGGTCTA 58.796 41.667 11.64 4.64 44.98 2.59
6070 6609 4.029520 ACTAATCATGAGCACTCAGGTCT 58.970 43.478 11.64 3.80 44.98 3.85
6071 6610 4.367450 GACTAATCATGAGCACTCAGGTC 58.633 47.826 11.64 6.57 43.61 3.85
6072 6611 3.133721 GGACTAATCATGAGCACTCAGGT 59.866 47.826 11.64 0.00 43.61 4.00
6073 6612 3.387374 AGGACTAATCATGAGCACTCAGG 59.613 47.826 5.98 5.98 43.61 3.86
6074 6613 4.370049 CAGGACTAATCATGAGCACTCAG 58.630 47.826 6.50 0.00 43.61 3.35
6075 6614 3.133542 CCAGGACTAATCATGAGCACTCA 59.866 47.826 2.25 2.25 39.01 3.41
6076 6615 3.726607 CCAGGACTAATCATGAGCACTC 58.273 50.000 0.09 0.00 39.01 3.51
6077 6616 2.158842 GCCAGGACTAATCATGAGCACT 60.159 50.000 0.09 0.00 39.01 4.40
6078 6617 2.216898 GCCAGGACTAATCATGAGCAC 58.783 52.381 0.09 0.00 39.01 4.40
6079 6618 1.141657 GGCCAGGACTAATCATGAGCA 59.858 52.381 0.09 0.00 39.01 4.26
6080 6619 1.141657 TGGCCAGGACTAATCATGAGC 59.858 52.381 0.00 0.00 39.01 4.26
6081 6620 3.327172 AGATGGCCAGGACTAATCATGAG 59.673 47.826 13.05 0.00 39.01 2.90
6082 6621 3.321039 AGATGGCCAGGACTAATCATGA 58.679 45.455 13.05 0.00 39.01 3.07
6083 6622 3.558746 GGAGATGGCCAGGACTAATCATG 60.559 52.174 13.05 0.00 36.36 3.07
6084 6623 2.641815 GGAGATGGCCAGGACTAATCAT 59.358 50.000 13.05 0.00 0.00 2.45
6085 6624 2.050144 GGAGATGGCCAGGACTAATCA 58.950 52.381 13.05 0.00 0.00 2.57
6086 6625 1.001406 CGGAGATGGCCAGGACTAATC 59.999 57.143 13.05 1.02 0.00 1.75
6087 6626 1.051812 CGGAGATGGCCAGGACTAAT 58.948 55.000 13.05 0.00 0.00 1.73
6088 6627 1.048724 CCGGAGATGGCCAGGACTAA 61.049 60.000 13.05 0.00 0.00 2.24
6089 6628 1.457643 CCGGAGATGGCCAGGACTA 60.458 63.158 13.05 0.00 0.00 2.59
6090 6629 2.765807 CCGGAGATGGCCAGGACT 60.766 66.667 13.05 10.74 0.00 3.85
6107 6646 1.828224 CTGGATTTTAGGGCCGGGC 60.828 63.158 22.00 22.00 0.00 6.13
6108 6647 1.152756 CCTGGATTTTAGGGCCGGG 60.153 63.158 2.18 0.00 41.55 5.73
6109 6648 4.579127 CCTGGATTTTAGGGCCGG 57.421 61.111 0.00 0.00 0.00 6.13
6114 6653 2.587522 GCCTAAGCCCTGGATTTTAGG 58.412 52.381 18.60 18.60 43.17 2.69
6159 6698 0.600057 CTCAAAACTCAGGCCCAAGC 59.400 55.000 0.00 0.00 38.76 4.01
6160 6699 0.600057 GCTCAAAACTCAGGCCCAAG 59.400 55.000 0.00 0.00 0.00 3.61
6161 6700 0.827507 GGCTCAAAACTCAGGCCCAA 60.828 55.000 0.00 0.00 37.12 4.12
6162 6701 1.228552 GGCTCAAAACTCAGGCCCA 60.229 57.895 0.00 0.00 37.12 5.36
6163 6702 3.686760 GGCTCAAAACTCAGGCCC 58.313 61.111 0.00 0.00 37.12 5.80
6165 6704 1.527433 GGTGGGCTCAAAACTCAGGC 61.527 60.000 0.00 0.00 34.44 4.85
6166 6705 0.178992 TGGTGGGCTCAAAACTCAGG 60.179 55.000 0.00 0.00 0.00 3.86
6167 6706 1.242076 CTGGTGGGCTCAAAACTCAG 58.758 55.000 0.00 0.00 0.00 3.35
6168 6707 0.823356 GCTGGTGGGCTCAAAACTCA 60.823 55.000 0.00 0.00 0.00 3.41
6169 6708 0.823356 TGCTGGTGGGCTCAAAACTC 60.823 55.000 0.00 0.00 0.00 3.01
6170 6709 0.825010 CTGCTGGTGGGCTCAAAACT 60.825 55.000 0.00 0.00 0.00 2.66
6171 6710 1.662044 CTGCTGGTGGGCTCAAAAC 59.338 57.895 0.00 0.00 0.00 2.43
6172 6711 1.531365 CCTGCTGGTGGGCTCAAAA 60.531 57.895 0.51 0.00 0.00 2.44
6173 6712 2.115910 CCTGCTGGTGGGCTCAAA 59.884 61.111 0.51 0.00 0.00 2.69
6174 6713 3.970410 CCCTGCTGGTGGGCTCAA 61.970 66.667 9.00 0.00 37.99 3.02
6181 6720 4.729918 GTCCAGGCCCTGCTGGTG 62.730 72.222 4.81 0.37 41.28 4.17
6193 6732 4.351054 AAGCCCAAGCCCGTCCAG 62.351 66.667 0.00 0.00 41.25 3.86
6194 6733 4.659172 CAAGCCCAAGCCCGTCCA 62.659 66.667 0.00 0.00 41.25 4.02
6199 6738 1.050421 AATATGCCAAGCCCAAGCCC 61.050 55.000 0.00 0.00 41.25 5.19
6200 6739 0.105408 CAATATGCCAAGCCCAAGCC 59.895 55.000 0.00 0.00 41.25 4.35
6201 6740 0.105408 CCAATATGCCAAGCCCAAGC 59.895 55.000 0.00 0.00 40.32 4.01
6202 6741 0.105408 GCCAATATGCCAAGCCCAAG 59.895 55.000 0.00 0.00 0.00 3.61
6203 6742 0.616964 TGCCAATATGCCAAGCCCAA 60.617 50.000 0.00 0.00 0.00 4.12
6204 6743 0.398806 ATGCCAATATGCCAAGCCCA 60.399 50.000 0.00 0.00 0.00 5.36
6205 6744 0.760572 AATGCCAATATGCCAAGCCC 59.239 50.000 0.00 0.00 0.00 5.19
6206 6745 2.625695 AAATGCCAATATGCCAAGCC 57.374 45.000 0.00 0.00 0.00 4.35
6207 6746 4.512571 CCTTAAAATGCCAATATGCCAAGC 59.487 41.667 0.00 0.00 0.00 4.01
6208 6747 5.916318 TCCTTAAAATGCCAATATGCCAAG 58.084 37.500 0.00 0.00 0.00 3.61
6209 6748 5.946942 TCCTTAAAATGCCAATATGCCAA 57.053 34.783 0.00 0.00 0.00 4.52
6210 6749 5.660417 TCTTCCTTAAAATGCCAATATGCCA 59.340 36.000 0.00 0.00 0.00 4.92
6211 6750 6.160576 TCTTCCTTAAAATGCCAATATGCC 57.839 37.500 0.00 0.00 0.00 4.40
6212 6751 6.218746 CCTCTTCCTTAAAATGCCAATATGC 58.781 40.000 0.00 0.00 0.00 3.14
6213 6752 6.218746 GCCTCTTCCTTAAAATGCCAATATG 58.781 40.000 0.00 0.00 0.00 1.78
6214 6753 5.305386 GGCCTCTTCCTTAAAATGCCAATAT 59.695 40.000 0.00 0.00 37.58 1.28
6215 6754 4.649218 GGCCTCTTCCTTAAAATGCCAATA 59.351 41.667 0.00 0.00 37.58 1.90
6216 6755 3.452264 GGCCTCTTCCTTAAAATGCCAAT 59.548 43.478 0.00 0.00 37.58 3.16
6217 6756 2.831526 GGCCTCTTCCTTAAAATGCCAA 59.168 45.455 0.00 0.00 37.58 4.52
6218 6757 2.456577 GGCCTCTTCCTTAAAATGCCA 58.543 47.619 0.00 0.00 37.58 4.92
6219 6758 1.757118 GGGCCTCTTCCTTAAAATGCC 59.243 52.381 0.84 0.00 36.92 4.40
6220 6759 1.405463 CGGGCCTCTTCCTTAAAATGC 59.595 52.381 0.84 0.00 0.00 3.56
6221 6760 2.024414 CCGGGCCTCTTCCTTAAAATG 58.976 52.381 0.84 0.00 0.00 2.32
6222 6761 1.685180 GCCGGGCCTCTTCCTTAAAAT 60.685 52.381 8.12 0.00 0.00 1.82
6223 6762 0.323087 GCCGGGCCTCTTCCTTAAAA 60.323 55.000 8.12 0.00 0.00 1.52
6224 6763 1.301954 GCCGGGCCTCTTCCTTAAA 59.698 57.895 8.12 0.00 0.00 1.52
6225 6764 2.676265 GGCCGGGCCTCTTCCTTAA 61.676 63.158 30.86 0.00 46.69 1.85
6226 6765 3.087906 GGCCGGGCCTCTTCCTTA 61.088 66.667 30.86 0.00 46.69 2.69
6257 6796 2.766828 AGCTTACAGTGTAGCCCTTAGG 59.233 50.000 16.32 0.00 38.14 2.69
6258 6797 4.401519 TGTAGCTTACAGTGTAGCCCTTAG 59.598 45.833 16.32 6.97 38.14 2.18
6259 6798 4.159135 GTGTAGCTTACAGTGTAGCCCTTA 59.841 45.833 16.32 5.27 39.77 2.69
6260 6799 3.056035 GTGTAGCTTACAGTGTAGCCCTT 60.056 47.826 16.32 5.97 39.77 3.95
6261 6800 2.496470 GTGTAGCTTACAGTGTAGCCCT 59.504 50.000 16.32 10.92 39.77 5.19
6262 6801 2.496470 AGTGTAGCTTACAGTGTAGCCC 59.504 50.000 16.32 10.69 40.64 5.19
6263 6802 3.870633 AGTGTAGCTTACAGTGTAGCC 57.129 47.619 16.32 7.37 40.64 3.93
6269 6808 8.750298 ACATATTTCTACAGTGTAGCTTACAGT 58.250 33.333 23.14 14.76 42.82 3.55
6270 6809 9.239002 GACATATTTCTACAGTGTAGCTTACAG 57.761 37.037 23.14 14.22 39.77 2.74
6271 6810 7.913821 CGACATATTTCTACAGTGTAGCTTACA 59.086 37.037 23.14 5.09 36.08 2.41
6272 6811 8.127327 TCGACATATTTCTACAGTGTAGCTTAC 58.873 37.037 23.14 9.26 0.00 2.34
6273 6812 8.217131 TCGACATATTTCTACAGTGTAGCTTA 57.783 34.615 23.14 14.68 0.00 3.09
6274 6813 7.096884 TCGACATATTTCTACAGTGTAGCTT 57.903 36.000 23.14 13.20 0.00 3.74
6275 6814 6.694877 TCGACATATTTCTACAGTGTAGCT 57.305 37.500 23.14 13.36 0.00 3.32
6276 6815 6.363626 CCATCGACATATTTCTACAGTGTAGC 59.636 42.308 23.14 7.63 0.00 3.58
6277 6816 7.649057 TCCATCGACATATTTCTACAGTGTAG 58.351 38.462 22.16 22.16 0.00 2.74
6278 6817 7.576861 TCCATCGACATATTTCTACAGTGTA 57.423 36.000 2.36 2.36 0.00 2.90
6279 6818 6.465439 TCCATCGACATATTTCTACAGTGT 57.535 37.500 0.00 0.00 0.00 3.55
6280 6819 7.953158 AATCCATCGACATATTTCTACAGTG 57.047 36.000 0.00 0.00 0.00 3.66
6281 6820 7.382488 CGAAATCCATCGACATATTTCTACAGT 59.618 37.037 18.46 0.00 45.48 3.55
6282 6821 7.595130 TCGAAATCCATCGACATATTTCTACAG 59.405 37.037 18.46 8.97 46.12 2.74
6283 6822 7.430441 TCGAAATCCATCGACATATTTCTACA 58.570 34.615 18.46 6.81 46.12 2.74
6284 6823 7.869016 TCGAAATCCATCGACATATTTCTAC 57.131 36.000 18.46 2.95 46.12 2.59
6401 6940 7.724305 TGCATTTATAATCCTAAACCGAGTC 57.276 36.000 0.00 0.00 0.00 3.36
6492 7031 1.250840 GGCCTCCAAAACGCCATTCT 61.251 55.000 0.00 0.00 42.52 2.40
6493 7032 1.215382 GGCCTCCAAAACGCCATTC 59.785 57.895 0.00 0.00 42.52 2.67
6494 7033 2.635443 CGGCCTCCAAAACGCCATT 61.635 57.895 0.00 0.00 43.17 3.16
6497 7036 3.431725 CTCGGCCTCCAAAACGCC 61.432 66.667 0.00 0.00 39.41 5.68
6499 7038 2.358737 AGCTCGGCCTCCAAAACG 60.359 61.111 0.00 0.00 0.00 3.60
6500 7039 3.579685 GAGCTCGGCCTCCAAAAC 58.420 61.111 0.00 0.00 0.00 2.43
6586 7137 7.178805 TGGGTTACATCCTTACATATACGCATA 59.821 37.037 0.00 0.00 0.00 3.14
6588 7139 5.304871 TGGGTTACATCCTTACATATACGCA 59.695 40.000 0.00 0.00 0.00 5.24
6589 7140 5.636543 GTGGGTTACATCCTTACATATACGC 59.363 44.000 0.00 0.00 0.00 4.42
6597 7148 6.033707 ACACACATGTGGGTTACATCCTTAC 61.034 44.000 28.06 0.00 46.70 2.34
6599 7150 3.181434 ACACACATGTGGGTTACATCCTT 60.181 43.478 28.06 1.71 46.70 3.36
6601 7152 2.790433 ACACACATGTGGGTTACATCC 58.210 47.619 28.06 0.00 46.70 3.51
6603 7154 6.716934 TTTTTACACACATGTGGGTTACAT 57.283 33.333 36.81 15.86 46.70 2.29
6604 7155 6.716934 ATTTTTACACACATGTGGGTTACA 57.283 33.333 36.81 19.88 46.70 2.41
6605 7156 7.203910 TGAATTTTTACACACATGTGGGTTAC 58.796 34.615 36.81 16.85 46.70 2.50
6625 7176 9.321562 GCAATTCAAGGTATTTCATCATGAATT 57.678 29.630 0.00 0.16 43.15 2.17
6626 7177 7.650504 CGCAATTCAAGGTATTTCATCATGAAT 59.349 33.333 0.00 0.00 36.11 2.57
6631 7182 5.163663 GGTCGCAATTCAAGGTATTTCATCA 60.164 40.000 0.00 0.00 0.00 3.07
6633 7184 4.949856 AGGTCGCAATTCAAGGTATTTCAT 59.050 37.500 0.00 0.00 0.00 2.57
6634 7185 4.155826 CAGGTCGCAATTCAAGGTATTTCA 59.844 41.667 0.00 0.00 0.00 2.69
6635 7186 4.156008 ACAGGTCGCAATTCAAGGTATTTC 59.844 41.667 0.00 0.00 0.00 2.17
6641 7192 2.422597 TGTACAGGTCGCAATTCAAGG 58.577 47.619 0.00 0.00 0.00 3.61
6642 7193 4.481930 TTTGTACAGGTCGCAATTCAAG 57.518 40.909 0.00 0.00 0.00 3.02
6674 7225 4.657504 ACTATTCATTCTCTCAGGCCATGA 59.342 41.667 5.01 5.02 36.21 3.07
6675 7226 4.970711 ACTATTCATTCTCTCAGGCCATG 58.029 43.478 5.01 0.00 0.00 3.66
6676 7227 6.499699 TGATACTATTCATTCTCTCAGGCCAT 59.500 38.462 5.01 0.00 0.00 4.40
6677 7228 5.840693 TGATACTATTCATTCTCTCAGGCCA 59.159 40.000 5.01 0.00 0.00 5.36
6678 7229 6.352016 TGATACTATTCATTCTCTCAGGCC 57.648 41.667 0.00 0.00 0.00 5.19
6679 7230 7.331440 CACATGATACTATTCATTCTCTCAGGC 59.669 40.741 0.00 0.00 34.09 4.85
6680 7231 8.366401 ACACATGATACTATTCATTCTCTCAGG 58.634 37.037 0.00 0.00 34.09 3.86
6681 7232 9.761504 AACACATGATACTATTCATTCTCTCAG 57.238 33.333 0.00 0.00 34.09 3.35
6689 7240 8.840321 GGCTGTTTAACACATGATACTATTCAT 58.160 33.333 0.00 0.00 36.79 2.57
6690 7241 7.282224 GGGCTGTTTAACACATGATACTATTCA 59.718 37.037 0.00 0.00 33.76 2.57
6691 7242 7.499232 AGGGCTGTTTAACACATGATACTATTC 59.501 37.037 0.00 0.00 33.76 1.75
6692 7243 7.346471 AGGGCTGTTTAACACATGATACTATT 58.654 34.615 0.00 0.00 33.76 1.73
6693 7244 6.900194 AGGGCTGTTTAACACATGATACTAT 58.100 36.000 0.00 0.00 33.76 2.12
6694 7245 6.308015 AGGGCTGTTTAACACATGATACTA 57.692 37.500 0.00 0.00 33.76 1.82
6695 7246 5.179452 AGGGCTGTTTAACACATGATACT 57.821 39.130 0.00 0.00 33.76 2.12
6696 7247 6.346096 TCTAGGGCTGTTTAACACATGATAC 58.654 40.000 0.00 0.00 33.76 2.24
6697 7248 6.553953 TCTAGGGCTGTTTAACACATGATA 57.446 37.500 0.00 0.00 33.76 2.15
6698 7249 5.435686 TCTAGGGCTGTTTAACACATGAT 57.564 39.130 0.00 0.00 33.76 2.45
6699 7250 4.901197 TCTAGGGCTGTTTAACACATGA 57.099 40.909 0.00 0.00 33.76 3.07
6700 7251 6.071952 ACAAATCTAGGGCTGTTTAACACATG 60.072 38.462 0.00 0.00 33.76 3.21
6701 7252 6.010219 ACAAATCTAGGGCTGTTTAACACAT 58.990 36.000 0.00 0.00 33.76 3.21
6702 7253 5.381757 ACAAATCTAGGGCTGTTTAACACA 58.618 37.500 0.00 0.00 0.00 3.72
6703 7254 5.705905 AGACAAATCTAGGGCTGTTTAACAC 59.294 40.000 0.00 0.00 31.46 3.32
6704 7255 5.876357 AGACAAATCTAGGGCTGTTTAACA 58.124 37.500 0.00 0.00 31.46 2.41
6705 7256 6.819397 AAGACAAATCTAGGGCTGTTTAAC 57.181 37.500 0.00 0.00 33.57 2.01
6706 7257 7.833285 AAAAGACAAATCTAGGGCTGTTTAA 57.167 32.000 0.00 0.00 33.57 1.52
6707 7258 7.833285 AAAAAGACAAATCTAGGGCTGTTTA 57.167 32.000 0.00 0.00 33.57 2.01
6708 7259 6.731292 AAAAAGACAAATCTAGGGCTGTTT 57.269 33.333 0.00 0.00 33.57 2.83
6728 7279 2.433604 TGAAATGAGGGCTGTGCAAAAA 59.566 40.909 0.00 0.00 0.00 1.94
6729 7280 2.037901 TGAAATGAGGGCTGTGCAAAA 58.962 42.857 0.00 0.00 0.00 2.44
6730 7281 1.702182 TGAAATGAGGGCTGTGCAAA 58.298 45.000 0.00 0.00 0.00 3.68
6731 7282 1.340889 GTTGAAATGAGGGCTGTGCAA 59.659 47.619 0.00 0.00 0.00 4.08
6732 7283 0.961019 GTTGAAATGAGGGCTGTGCA 59.039 50.000 0.00 0.00 0.00 4.57
6733 7284 0.109597 CGTTGAAATGAGGGCTGTGC 60.110 55.000 0.00 0.00 0.00 4.57
6734 7285 1.238439 ACGTTGAAATGAGGGCTGTG 58.762 50.000 0.00 0.00 0.00 3.66
6735 7286 2.851263 TACGTTGAAATGAGGGCTGT 57.149 45.000 0.00 0.00 0.00 4.40
6736 7287 4.701956 AAATACGTTGAAATGAGGGCTG 57.298 40.909 0.00 0.00 0.00 4.85
6737 7288 4.618227 GCAAAATACGTTGAAATGAGGGCT 60.618 41.667 0.00 0.00 0.00 5.19
6738 7289 3.612423 GCAAAATACGTTGAAATGAGGGC 59.388 43.478 0.00 0.00 0.00 5.19
6739 7290 4.173256 GGCAAAATACGTTGAAATGAGGG 58.827 43.478 0.00 0.00 0.00 4.30
6740 7291 4.082245 AGGGCAAAATACGTTGAAATGAGG 60.082 41.667 0.00 0.00 0.00 3.86
6741 7292 4.858692 CAGGGCAAAATACGTTGAAATGAG 59.141 41.667 0.00 0.00 0.00 2.90
6742 7293 4.520874 TCAGGGCAAAATACGTTGAAATGA 59.479 37.500 0.00 0.00 0.00 2.57
6743 7294 4.804108 TCAGGGCAAAATACGTTGAAATG 58.196 39.130 0.00 0.00 0.00 2.32
6744 7295 5.461032 TTCAGGGCAAAATACGTTGAAAT 57.539 34.783 0.00 0.00 0.00 2.17
6745 7296 4.920640 TTCAGGGCAAAATACGTTGAAA 57.079 36.364 0.00 0.00 0.00 2.69
6746 7297 4.920640 TTTCAGGGCAAAATACGTTGAA 57.079 36.364 0.00 0.00 0.00 2.69
6747 7298 4.920640 TTTTCAGGGCAAAATACGTTGA 57.079 36.364 0.00 0.00 0.00 3.18
6748 7299 6.538189 AAATTTTCAGGGCAAAATACGTTG 57.462 33.333 0.00 0.00 35.35 4.10
6749 7300 7.170151 GTGTAAATTTTCAGGGCAAAATACGTT 59.830 33.333 0.00 0.00 35.35 3.99
6750 7301 6.643360 GTGTAAATTTTCAGGGCAAAATACGT 59.357 34.615 0.00 0.00 35.35 3.57
6751 7302 6.642950 TGTGTAAATTTTCAGGGCAAAATACG 59.357 34.615 0.00 0.00 35.35 3.06
6752 7303 7.439655 TGTGTGTAAATTTTCAGGGCAAAATAC 59.560 33.333 0.00 0.00 35.35 1.89
6753 7304 7.500992 TGTGTGTAAATTTTCAGGGCAAAATA 58.499 30.769 0.00 0.00 35.35 1.40
6754 7305 6.352516 TGTGTGTAAATTTTCAGGGCAAAAT 58.647 32.000 0.00 0.00 37.53 1.82
6755 7306 5.734720 TGTGTGTAAATTTTCAGGGCAAAA 58.265 33.333 0.00 0.00 0.00 2.44
6756 7307 5.344743 TGTGTGTAAATTTTCAGGGCAAA 57.655 34.783 0.00 0.00 0.00 3.68
6757 7308 5.163364 ACATGTGTGTAAATTTTCAGGGCAA 60.163 36.000 0.00 0.00 36.63 4.52
6758 7309 4.343526 ACATGTGTGTAAATTTTCAGGGCA 59.656 37.500 0.00 0.00 36.63 5.36
6759 7310 4.685628 CACATGTGTGTAAATTTTCAGGGC 59.314 41.667 18.03 0.00 40.96 5.19
6773 7324 6.126914 CATGAAGGCATAACACACATGTGTG 61.127 44.000 43.01 43.01 44.88 3.82
6774 7325 4.082625 CATGAAGGCATAACACACATGTGT 60.083 41.667 25.76 25.76 46.35 3.72
6775 7326 4.082625 ACATGAAGGCATAACACACATGTG 60.083 41.667 24.25 24.25 42.90 3.21
6776 7327 4.081406 ACATGAAGGCATAACACACATGT 58.919 39.130 0.00 0.00 40.84 3.21
6777 7328 4.707030 ACATGAAGGCATAACACACATG 57.293 40.909 0.00 0.00 39.27 3.21
6778 7329 6.205464 GCTATACATGAAGGCATAACACACAT 59.795 38.462 0.00 0.00 32.27 3.21
6779 7330 5.527214 GCTATACATGAAGGCATAACACACA 59.473 40.000 0.00 0.00 32.27 3.72
6780 7331 5.760253 AGCTATACATGAAGGCATAACACAC 59.240 40.000 0.00 0.00 32.27 3.82
6781 7332 5.759763 CAGCTATACATGAAGGCATAACACA 59.240 40.000 0.00 0.00 32.27 3.72
6782 7333 5.760253 ACAGCTATACATGAAGGCATAACAC 59.240 40.000 0.00 0.00 32.27 3.32
6783 7334 5.759763 CACAGCTATACATGAAGGCATAACA 59.240 40.000 0.00 0.00 32.27 2.41
6784 7335 5.760253 ACACAGCTATACATGAAGGCATAAC 59.240 40.000 0.00 0.00 32.27 1.89
6785 7336 5.928976 ACACAGCTATACATGAAGGCATAA 58.071 37.500 0.00 0.00 32.27 1.90
6786 7337 5.551305 ACACAGCTATACATGAAGGCATA 57.449 39.130 0.00 0.00 32.27 3.14
6787 7338 4.428294 ACACAGCTATACATGAAGGCAT 57.572 40.909 0.00 0.00 34.29 4.40
6788 7339 3.912496 ACACAGCTATACATGAAGGCA 57.088 42.857 0.00 0.00 0.00 4.75
6789 7340 5.567138 AAAACACAGCTATACATGAAGGC 57.433 39.130 0.00 0.00 0.00 4.35
6851 7402 8.351461 GCCTCCAAATTCAAATTTCAAATTTCA 58.649 29.630 5.04 0.00 36.52 2.69
6852 7403 7.809331 GGCCTCCAAATTCAAATTTCAAATTTC 59.191 33.333 5.04 6.61 36.52 2.17
6853 7404 7.506599 AGGCCTCCAAATTCAAATTTCAAATTT 59.493 29.630 0.00 1.98 36.52 1.82
6854 7405 7.005902 AGGCCTCCAAATTCAAATTTCAAATT 58.994 30.769 0.00 0.00 36.52 1.82
6855 7406 6.545567 AGGCCTCCAAATTCAAATTTCAAAT 58.454 32.000 0.00 0.00 36.52 2.32
6856 7407 5.939447 AGGCCTCCAAATTCAAATTTCAAA 58.061 33.333 0.00 0.00 36.52 2.69
6857 7408 5.071519 TGAGGCCTCCAAATTCAAATTTCAA 59.928 36.000 29.95 1.51 36.52 2.69
6858 7409 4.592351 TGAGGCCTCCAAATTCAAATTTCA 59.408 37.500 29.95 2.98 36.52 2.69
6859 7410 5.151297 TGAGGCCTCCAAATTCAAATTTC 57.849 39.130 29.95 0.00 36.52 2.17
6860 7411 5.767277 ATGAGGCCTCCAAATTCAAATTT 57.233 34.783 29.95 0.00 39.07 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.