Multiple sequence alignment - TraesCS7D01G306600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G306600 chr7D 100.000 4372 0 0 1 4372 388020772 388025143 0.000000e+00 8074.0
1 TraesCS7D01G306600 chr7D 92.225 836 51 7 3 833 186435087 186434261 0.000000e+00 1171.0
2 TraesCS7D01G306600 chr7D 87.262 840 91 10 3 836 29812924 29812095 0.000000e+00 944.0
3 TraesCS7D01G306600 chr7D 91.705 217 16 2 1860 2075 387346130 387346345 2.560000e-77 300.0
4 TraesCS7D01G306600 chr7D 81.661 289 41 8 549 832 557571463 557571744 3.400000e-56 230.0
5 TraesCS7D01G306600 chr7D 97.436 39 1 0 3704 3742 388024435 388024473 2.820000e-07 67.6
6 TraesCS7D01G306600 chr7D 97.436 39 1 0 3664 3702 388024475 388024513 2.820000e-07 67.6
7 TraesCS7D01G306600 chr7A 92.088 2692 173 20 834 3505 438168325 438170996 0.000000e+00 3755.0
8 TraesCS7D01G306600 chr7A 85.764 288 15 12 4006 4292 438179545 438179807 9.260000e-72 281.0
9 TraesCS7D01G306600 chr7B 91.531 1960 116 22 834 2776 383502123 383504049 0.000000e+00 2654.0
10 TraesCS7D01G306600 chr7B 88.170 896 56 21 2825 3673 383504222 383505114 0.000000e+00 1022.0
11 TraesCS7D01G306600 chr7B 79.526 591 105 11 2106 2690 403563910 403563330 1.460000e-109 407.0
12 TraesCS7D01G306600 chr7B 79.492 590 108 11 2106 2690 407940564 407939983 1.460000e-109 407.0
13 TraesCS7D01G306600 chr7B 79.019 591 108 12 2106 2690 403729761 403729181 1.470000e-104 390.0
14 TraesCS7D01G306600 chr7B 78.716 592 107 14 2106 2690 408111500 408110921 1.150000e-100 377.0
15 TraesCS7D01G306600 chr7B 91.163 215 9 6 4067 4275 383506191 383506401 2.570000e-72 283.0
16 TraesCS7D01G306600 chr7B 78.610 187 38 2 1176 1361 403732324 403732139 5.940000e-24 122.0
17 TraesCS7D01G306600 chr7B 78.075 187 39 2 1176 1361 407943167 407942982 2.760000e-22 117.0
18 TraesCS7D01G306600 chr7B 91.250 80 7 0 1472 1551 403732005 403731926 4.620000e-20 110.0
19 TraesCS7D01G306600 chr7B 77.005 187 41 2 1176 1361 403566477 403566292 5.980000e-19 106.0
20 TraesCS7D01G306600 chr7B 90.000 80 8 0 1472 1551 407942848 407942769 2.150000e-18 104.0
21 TraesCS7D01G306600 chr7B 90.000 80 8 0 1472 1551 408113785 408113706 2.150000e-18 104.0
22 TraesCS7D01G306600 chr7B 94.286 35 2 0 4329 4363 562387549 562387515 2.000000e-03 54.7
23 TraesCS7D01G306600 chr5B 91.776 1143 86 7 1860 2997 674737981 674736842 0.000000e+00 1583.0
24 TraesCS7D01G306600 chr5B 88.540 733 57 7 1900 2629 674746809 674746101 0.000000e+00 863.0
25 TraesCS7D01G306600 chr5B 81.926 841 140 10 3 839 137053911 137053079 0.000000e+00 701.0
26 TraesCS7D01G306600 chr5B 89.625 347 28 8 2625 2967 674738651 674738309 6.720000e-118 435.0
27 TraesCS7D01G306600 chr3D 91.646 826 56 8 10 833 105145726 105144912 0.000000e+00 1131.0
28 TraesCS7D01G306600 chr6A 87.966 831 93 4 3 831 583985536 583986361 0.000000e+00 974.0
29 TraesCS7D01G306600 chr2A 88.243 808 86 6 30 833 385358034 385357232 0.000000e+00 957.0
30 TraesCS7D01G306600 chr1A 86.148 823 107 3 10 830 514637569 514636752 0.000000e+00 881.0
31 TraesCS7D01G306600 chr6D 89.873 553 49 3 278 829 6342025 6342571 0.000000e+00 704.0
32 TraesCS7D01G306600 chr5D 82.399 767 119 10 61 823 370445491 370444737 0.000000e+00 654.0
33 TraesCS7D01G306600 chr5D 91.705 217 16 2 1860 2075 133274562 133274347 2.560000e-77 300.0
34 TraesCS7D01G306600 chr5D 91.705 217 16 2 1860 2075 324711994 324712209 2.560000e-77 300.0
35 TraesCS7D01G306600 chr5D 91.244 217 17 2 1860 2075 46641596 46641381 1.190000e-75 294.0
36 TraesCS7D01G306600 chr5D 89.362 235 22 3 2663 2896 327294974 327294742 4.280000e-75 292.0
37 TraesCS7D01G306600 chr5D 84.950 299 34 5 538 832 457021370 457021661 4.280000e-75 292.0
38 TraesCS7D01G306600 chr2D 91.244 217 17 2 1860 2075 486374001 486373786 1.190000e-75 294.0
39 TraesCS7D01G306600 chr4D 90.783 217 18 2 1860 2075 502962181 502961966 5.530000e-74 289.0
40 TraesCS7D01G306600 chr4D 93.671 79 5 0 1472 1550 84779022 84778944 7.680000e-23 119.0
41 TraesCS7D01G306600 chr4A 87.288 236 27 3 2663 2897 708848116 708847883 2.590000e-67 267.0
42 TraesCS7D01G306600 chr4A 91.250 80 7 0 1472 1551 497909031 497908952 4.620000e-20 110.0
43 TraesCS7D01G306600 chr4B 93.671 79 5 0 1472 1550 121590714 121590792 7.680000e-23 119.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G306600 chr7D 388020772 388025143 4371 False 2736.400000 8074 98.290667 1 4372 3 chr7D.!!$F3 4371
1 TraesCS7D01G306600 chr7D 186434261 186435087 826 True 1171.000000 1171 92.225000 3 833 1 chr7D.!!$R2 830
2 TraesCS7D01G306600 chr7D 29812095 29812924 829 True 944.000000 944 87.262000 3 836 1 chr7D.!!$R1 833
3 TraesCS7D01G306600 chr7A 438168325 438170996 2671 False 3755.000000 3755 92.088000 834 3505 1 chr7A.!!$F1 2671
4 TraesCS7D01G306600 chr7B 383502123 383506401 4278 False 1319.666667 2654 90.288000 834 4275 3 chr7B.!!$F1 3441
5 TraesCS7D01G306600 chr7B 403563330 403566477 3147 True 256.500000 407 78.265500 1176 2690 2 chr7B.!!$R2 1514
6 TraesCS7D01G306600 chr7B 408110921 408113785 2864 True 240.500000 377 84.358000 1472 2690 2 chr7B.!!$R5 1218
7 TraesCS7D01G306600 chr7B 407939983 407943167 3184 True 209.333333 407 82.522333 1176 2690 3 chr7B.!!$R4 1514
8 TraesCS7D01G306600 chr7B 403729181 403732324 3143 True 207.333333 390 82.959667 1176 2690 3 chr7B.!!$R3 1514
9 TraesCS7D01G306600 chr5B 674736842 674738651 1809 True 1009.000000 1583 90.700500 1860 2997 2 chr5B.!!$R3 1137
10 TraesCS7D01G306600 chr5B 674746101 674746809 708 True 863.000000 863 88.540000 1900 2629 1 chr5B.!!$R2 729
11 TraesCS7D01G306600 chr5B 137053079 137053911 832 True 701.000000 701 81.926000 3 839 1 chr5B.!!$R1 836
12 TraesCS7D01G306600 chr3D 105144912 105145726 814 True 1131.000000 1131 91.646000 10 833 1 chr3D.!!$R1 823
13 TraesCS7D01G306600 chr6A 583985536 583986361 825 False 974.000000 974 87.966000 3 831 1 chr6A.!!$F1 828
14 TraesCS7D01G306600 chr2A 385357232 385358034 802 True 957.000000 957 88.243000 30 833 1 chr2A.!!$R1 803
15 TraesCS7D01G306600 chr1A 514636752 514637569 817 True 881.000000 881 86.148000 10 830 1 chr1A.!!$R1 820
16 TraesCS7D01G306600 chr6D 6342025 6342571 546 False 704.000000 704 89.873000 278 829 1 chr6D.!!$F1 551
17 TraesCS7D01G306600 chr5D 370444737 370445491 754 True 654.000000 654 82.399000 61 823 1 chr5D.!!$R4 762

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
674 685 0.031994 AACACGGCAGGTTTTGATGC 59.968 50.0 0.00 0.0 0.00 3.91 F
1133 1150 0.101399 CGTCCATCTCGTAGCTGCTT 59.899 55.0 7.79 0.0 0.00 3.91 F
1426 1443 0.605589 CTCGTCCCCCGCTTTTCTTT 60.606 55.0 0.00 0.0 36.19 2.52 F
2931 5147 0.599991 TGCGGTGTGTGAGATGTGTC 60.600 55.0 0.00 0.0 0.00 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2589 4678 0.523072 ATGCGTTGAGGAACATGTGC 59.477 50.000 0.00 0.0 31.78 4.57 R
2897 5112 2.811431 CACCGCAAGATTACACAAAGGA 59.189 45.455 0.00 0.0 43.02 3.36 R
3279 5509 1.594331 AAACTGGCGACTTGAAGGAC 58.406 50.000 0.00 0.0 0.00 3.85 R
4343 7385 0.028770 TTATGCGCGGCAACATTAGC 59.971 50.000 8.83 0.0 43.62 3.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 3.310307 CCCCAACCTTTTGCCCCG 61.310 66.667 0.00 0.00 0.00 5.73
274 276 1.998315 CTCAAGAACAGATGCTGGACG 59.002 52.381 0.00 0.00 35.51 4.79
328 330 1.005215 CAGGATTCCTGCCCTCTTTGT 59.995 52.381 19.49 0.00 45.13 2.83
386 388 2.146342 GCTGTGTCTTTGCTAAGCAGA 58.854 47.619 14.67 9.03 40.61 4.26
405 412 1.690352 GATTTGGCATTGGATGGGGAG 59.310 52.381 0.00 0.00 0.00 4.30
414 421 2.111878 GATGGGGAGCATCACGGG 59.888 66.667 0.00 0.00 41.82 5.28
657 668 3.017265 CCTCATGAAAGGCAACACAAC 57.983 47.619 0.00 0.00 41.41 3.32
658 669 2.361757 CCTCATGAAAGGCAACACAACA 59.638 45.455 0.00 0.00 41.41 3.33
659 670 3.374745 CTCATGAAAGGCAACACAACAC 58.625 45.455 0.00 0.00 41.41 3.32
660 671 2.118683 CATGAAAGGCAACACAACACG 58.881 47.619 0.00 0.00 41.41 4.49
661 672 0.453793 TGAAAGGCAACACAACACGG 59.546 50.000 0.00 0.00 41.41 4.94
662 673 0.869880 GAAAGGCAACACAACACGGC 60.870 55.000 0.00 0.00 41.41 5.68
672 683 1.066908 CACAACACGGCAGGTTTTGAT 59.933 47.619 11.51 0.00 38.33 2.57
674 685 0.031994 AACACGGCAGGTTTTGATGC 59.968 50.000 0.00 0.00 0.00 3.91
708 719 3.133721 GGCCAGATCATGAGTAGTGACTT 59.866 47.826 0.09 0.00 35.45 3.01
710 721 4.382470 GCCAGATCATGAGTAGTGACTTGT 60.382 45.833 0.09 0.00 35.45 3.16
751 766 5.835113 AATCCCGGCATGTAATTATATGC 57.165 39.130 29.20 29.20 46.15 3.14
884 901 2.120909 CCGAAGCGCCCATCCATTT 61.121 57.895 2.29 0.00 0.00 2.32
1102 1119 2.611292 CACACAGGCTTAGCAATCTAGC 59.389 50.000 6.53 0.00 0.00 3.42
1133 1150 0.101399 CGTCCATCTCGTAGCTGCTT 59.899 55.000 7.79 0.00 0.00 3.91
1426 1443 0.605589 CTCGTCCCCCGCTTTTCTTT 60.606 55.000 0.00 0.00 36.19 2.52
1456 1499 1.067199 GCCGCGAATTTTGTGCTGAG 61.067 55.000 8.23 0.00 0.00 3.35
1572 1615 2.581354 AGACCGGATCTGCTGTGC 59.419 61.111 9.46 0.00 35.81 4.57
1579 1622 1.520342 GATCTGCTGTGCCCTCGAC 60.520 63.158 0.00 0.00 0.00 4.20
1587 1630 2.544685 CTGTGCCCTCGACTTATTCTG 58.455 52.381 0.00 0.00 0.00 3.02
1588 1631 1.291132 GTGCCCTCGACTTATTCTGC 58.709 55.000 0.00 0.00 0.00 4.26
1589 1632 1.134670 GTGCCCTCGACTTATTCTGCT 60.135 52.381 0.00 0.00 0.00 4.24
1613 1656 4.518278 ATTATGTGGTGGATTGCTGGTA 57.482 40.909 0.00 0.00 0.00 3.25
1640 1684 4.585955 TGCGGTTAATGGAGAGAGATAC 57.414 45.455 0.00 0.00 0.00 2.24
1658 1702 1.065928 CCCTACGTCCGTGATGAGC 59.934 63.158 1.98 0.00 0.00 4.26
1735 1789 2.824689 TTGATGATGCCCTTGCCTAA 57.175 45.000 0.00 0.00 36.33 2.69
1859 1914 9.706691 AGTACCATTGTATTATTACCGAATCAG 57.293 33.333 0.00 0.00 0.00 2.90
1862 1917 9.793259 ACCATTGTATTATTACCGAATCAGAAT 57.207 29.630 0.00 0.00 0.00 2.40
1871 3402 1.001706 CCGAATCAGAATGCTGCCATG 60.002 52.381 0.00 0.00 42.01 3.66
1898 3429 7.405469 TTTATGTGTGCAATTTAGCTGTTTG 57.595 32.000 0.00 0.00 34.99 2.93
1932 3463 8.729756 CAAGTATGTATGTCAAAGTTCCATTCA 58.270 33.333 0.00 0.00 0.00 2.57
1966 3497 8.776376 AATTGGCAAGTTTAGATAACAAATGG 57.224 30.769 5.96 0.00 0.00 3.16
2095 4133 8.154649 TCTGAGGTTAATTCTTGTCTTGTTTC 57.845 34.615 0.00 0.00 0.00 2.78
2101 4140 9.166126 GGTTAATTCTTGTCTTGTTTCTTTACG 57.834 33.333 0.00 0.00 0.00 3.18
2103 4142 4.446857 TCTTGTCTTGTTTCTTTACGCG 57.553 40.909 3.53 3.53 0.00 6.01
2112 4189 1.847890 TTCTTTACGCGCAGGTTGGC 61.848 55.000 5.73 0.00 0.00 4.52
2247 4326 3.044986 CGTTTCAGTGGATGCTTTTGTG 58.955 45.455 0.00 0.00 0.00 3.33
2661 4750 4.039730 ACAGACTACTCATATGACCATGCC 59.960 45.833 0.00 0.00 0.00 4.40
2708 4797 6.681777 AGGTAATTCTTGTTCTGCAATGTTC 58.318 36.000 0.00 0.00 36.36 3.18
2713 4802 6.691754 TTCTTGTTCTGCAATGTTCTGTTA 57.308 33.333 0.00 0.00 36.36 2.41
2714 4803 6.304356 TCTTGTTCTGCAATGTTCTGTTAG 57.696 37.500 0.00 0.00 36.36 2.34
2723 4812 5.882000 TGCAATGTTCTGTTAGCACTATGAT 59.118 36.000 0.00 0.00 0.00 2.45
2724 4813 6.037500 TGCAATGTTCTGTTAGCACTATGATC 59.962 38.462 0.00 0.00 0.00 2.92
2761 4851 8.752766 AACATGCATTAGAATTTGTCTTGAAG 57.247 30.769 0.00 0.00 37.84 3.02
2827 5042 2.158652 AGCTACTGATCAGCATGCCATT 60.159 45.455 22.83 3.03 41.66 3.16
2829 5044 3.817084 GCTACTGATCAGCATGCCATTTA 59.183 43.478 22.83 3.38 38.93 1.40
2863 5078 5.876357 ACCAATTCTGGAGCTTAACAAGTA 58.124 37.500 0.00 0.00 46.92 2.24
2864 5079 5.705905 ACCAATTCTGGAGCTTAACAAGTAC 59.294 40.000 0.00 0.00 46.92 2.73
2897 5112 2.609747 TGTGTTAGCCTCTTCCTGTCT 58.390 47.619 0.00 0.00 0.00 3.41
2915 5131 3.745975 TGTCTCCTTTGTGTAATCTTGCG 59.254 43.478 0.00 0.00 0.00 4.85
2931 5147 0.599991 TGCGGTGTGTGAGATGTGTC 60.600 55.000 0.00 0.00 0.00 3.67
3023 5252 2.159476 AGCAACTGCATCATTGTTAGCG 60.159 45.455 4.22 0.00 45.16 4.26
3024 5253 2.414559 GCAACTGCATCATTGTTAGCGT 60.415 45.455 0.00 0.00 41.59 5.07
3057 5286 4.588951 TGATCGCATGGTTCTTCCTACTAT 59.411 41.667 0.00 0.00 37.07 2.12
3067 5296 8.562949 TGGTTCTTCCTACTATAGCCTAATTT 57.437 34.615 0.00 0.00 37.07 1.82
3279 5509 1.344942 GACGACTAAGCTGTGTGCCG 61.345 60.000 0.00 0.00 44.23 5.69
3417 5661 5.579511 ACGTTATGTCATGCACTTAGTTACC 59.420 40.000 0.00 0.00 0.00 2.85
3508 5753 3.798202 AGGCTTGTTTATCGATGTCTCC 58.202 45.455 8.54 0.29 0.00 3.71
3523 5784 2.210116 GTCTCCGTTCAGACAGCAAAA 58.790 47.619 2.40 0.00 42.25 2.44
3537 5798 7.066163 TCAGACAGCAAAATAATGGTATCTGTG 59.934 37.037 12.68 0.00 46.86 3.66
3573 5834 1.305219 TTTTTGGGATCGAGCGCTGG 61.305 55.000 18.48 15.88 0.00 4.85
3589 5850 1.876497 CTGGTTTGGCCGTTGGATGG 61.876 60.000 0.00 0.00 41.21 3.51
3595 5856 2.051518 GGCCGTTGGATGGAATGCA 61.052 57.895 0.00 0.00 45.47 3.96
3601 5862 3.099002 TGGATGGAATGCACCGATG 57.901 52.632 0.00 0.00 40.85 3.84
3618 5879 2.260743 GCTGAAGCAAGCCTTGGC 59.739 61.111 6.57 2.97 41.59 4.52
3619 5880 2.564975 CTGAAGCAAGCCTTGGCG 59.435 61.111 6.57 0.00 32.78 5.69
3621 5882 2.256461 GAAGCAAGCCTTGGCGTG 59.744 61.111 20.30 20.30 32.78 5.34
3628 5889 2.594592 GCCTTGGCGTGTCAACCT 60.595 61.111 0.00 0.00 0.00 3.50
3650 5911 1.005557 GCGAGCGATTTCTGTGACATC 60.006 52.381 0.00 0.00 0.00 3.06
3651 5912 1.253800 CGAGCGATTTCTGTGACATCG 59.746 52.381 10.55 10.55 42.70 3.84
3663 5927 4.277423 TCTGTGACATCGTGTACTCTTTCA 59.723 41.667 0.00 0.00 0.00 2.69
3664 5928 4.939271 TGTGACATCGTGTACTCTTTCAA 58.061 39.130 0.00 0.00 0.00 2.69
3666 5930 4.743151 GTGACATCGTGTACTCTTTCAACA 59.257 41.667 0.00 0.00 0.00 3.33
3670 5934 3.450578 TCGTGTACTCTTTCAACACCAC 58.549 45.455 0.00 0.00 40.28 4.16
3671 5935 3.131577 TCGTGTACTCTTTCAACACCACT 59.868 43.478 0.00 0.00 40.28 4.00
3672 5936 3.489785 CGTGTACTCTTTCAACACCACTC 59.510 47.826 0.00 0.00 40.28 3.51
3673 5937 3.808174 GTGTACTCTTTCAACACCACTCC 59.192 47.826 0.00 0.00 38.02 3.85
3674 5938 3.709653 TGTACTCTTTCAACACCACTCCT 59.290 43.478 0.00 0.00 0.00 3.69
3675 5939 3.477210 ACTCTTTCAACACCACTCCTC 57.523 47.619 0.00 0.00 0.00 3.71
3676 5940 3.041946 ACTCTTTCAACACCACTCCTCT 58.958 45.455 0.00 0.00 0.00 3.69
3677 5941 4.223953 ACTCTTTCAACACCACTCCTCTA 58.776 43.478 0.00 0.00 0.00 2.43
3678 5942 4.039366 ACTCTTTCAACACCACTCCTCTAC 59.961 45.833 0.00 0.00 0.00 2.59
3679 5943 3.323979 TCTTTCAACACCACTCCTCTACC 59.676 47.826 0.00 0.00 0.00 3.18
3680 5944 2.391926 TCAACACCACTCCTCTACCA 57.608 50.000 0.00 0.00 0.00 3.25
3681 5945 2.902608 TCAACACCACTCCTCTACCAT 58.097 47.619 0.00 0.00 0.00 3.55
3682 5946 2.832129 TCAACACCACTCCTCTACCATC 59.168 50.000 0.00 0.00 0.00 3.51
3683 5947 2.567169 CAACACCACTCCTCTACCATCA 59.433 50.000 0.00 0.00 0.00 3.07
3684 5948 2.180276 ACACCACTCCTCTACCATCAC 58.820 52.381 0.00 0.00 0.00 3.06
3685 5949 1.135139 CACCACTCCTCTACCATCACG 59.865 57.143 0.00 0.00 0.00 4.35
3686 5950 1.272536 ACCACTCCTCTACCATCACGT 60.273 52.381 0.00 0.00 0.00 4.49
3687 5951 1.405821 CCACTCCTCTACCATCACGTC 59.594 57.143 0.00 0.00 0.00 4.34
3688 5952 1.405821 CACTCCTCTACCATCACGTCC 59.594 57.143 0.00 0.00 0.00 4.79
3689 5953 1.285373 ACTCCTCTACCATCACGTCCT 59.715 52.381 0.00 0.00 0.00 3.85
3690 5954 1.678627 CTCCTCTACCATCACGTCCTG 59.321 57.143 0.00 0.00 0.00 3.86
3691 5955 0.747255 CCTCTACCATCACGTCCTGG 59.253 60.000 10.66 10.66 38.55 4.45
3692 5956 0.103208 CTCTACCATCACGTCCTGGC 59.897 60.000 11.89 0.00 35.88 4.85
3693 5957 1.226974 CTACCATCACGTCCTGGCG 60.227 63.158 11.89 8.60 35.88 5.69
3694 5958 1.663379 CTACCATCACGTCCTGGCGA 61.663 60.000 15.53 1.55 35.88 5.54
3695 5959 1.252215 TACCATCACGTCCTGGCGAA 61.252 55.000 15.53 5.52 35.88 4.70
3696 5960 2.100631 CCATCACGTCCTGGCGAAC 61.101 63.158 15.53 0.00 35.59 3.95
3697 5961 1.079819 CATCACGTCCTGGCGAACT 60.080 57.895 15.53 0.00 35.59 3.01
3698 5962 1.078759 CATCACGTCCTGGCGAACTC 61.079 60.000 15.53 0.00 35.59 3.01
3699 5963 2.543687 ATCACGTCCTGGCGAACTCG 62.544 60.000 15.53 0.00 43.27 4.18
3700 5964 2.981909 ACGTCCTGGCGAACTCGA 60.982 61.111 15.53 0.00 43.02 4.04
3708 5972 2.734379 GGCGAACTCGACTAACACC 58.266 57.895 2.69 0.00 45.57 4.16
3709 5973 0.038892 GGCGAACTCGACTAACACCA 60.039 55.000 2.69 0.00 45.57 4.17
3710 5974 1.058404 GCGAACTCGACTAACACCAC 58.942 55.000 2.69 0.00 43.02 4.16
3711 5975 1.335689 GCGAACTCGACTAACACCACT 60.336 52.381 2.69 0.00 43.02 4.00
3712 5976 2.582687 CGAACTCGACTAACACCACTC 58.417 52.381 0.00 0.00 43.02 3.51
3717 5981 3.008813 ACTCGACTAACACCACTCCTCTA 59.991 47.826 0.00 0.00 0.00 2.43
3720 5984 3.428532 GACTAACACCACTCCTCTACCA 58.571 50.000 0.00 0.00 0.00 3.25
3724 5988 2.180276 ACACCACTCCTCTACCATCAC 58.820 52.381 0.00 0.00 0.00 3.06
3725 5989 1.135139 CACCACTCCTCTACCATCACG 59.865 57.143 0.00 0.00 0.00 4.35
3731 5995 0.747255 CCTCTACCATCACGTCCTGG 59.253 60.000 10.66 10.66 38.55 4.45
3732 5996 0.103208 CTCTACCATCACGTCCTGGC 59.897 60.000 11.89 0.00 35.88 4.85
3736 6000 2.887568 CATCACGTCCTGGCGAGC 60.888 66.667 15.53 0.00 35.59 5.03
3797 6061 3.461773 CGGAGGCGTGTGAGGGAT 61.462 66.667 0.00 0.00 0.00 3.85
3798 6062 2.990479 GGAGGCGTGTGAGGGATT 59.010 61.111 0.00 0.00 0.00 3.01
3799 6063 1.450312 GGAGGCGTGTGAGGGATTG 60.450 63.158 0.00 0.00 0.00 2.67
3800 6064 1.596934 GAGGCGTGTGAGGGATTGA 59.403 57.895 0.00 0.00 0.00 2.57
3801 6065 0.741221 GAGGCGTGTGAGGGATTGAC 60.741 60.000 0.00 0.00 0.00 3.18
3802 6066 1.003839 GGCGTGTGAGGGATTGACA 60.004 57.895 0.00 0.00 0.00 3.58
3803 6067 1.021390 GGCGTGTGAGGGATTGACAG 61.021 60.000 0.00 0.00 0.00 3.51
3806 6070 0.036732 GTGTGAGGGATTGACAGGCA 59.963 55.000 0.00 0.00 0.00 4.75
3808 6072 0.393537 GTGAGGGATTGACAGGCAGG 60.394 60.000 0.00 0.00 0.00 4.85
3809 6073 1.225704 GAGGGATTGACAGGCAGGG 59.774 63.158 0.00 0.00 0.00 4.45
3810 6074 1.229951 AGGGATTGACAGGCAGGGA 60.230 57.895 0.00 0.00 0.00 4.20
3811 6075 0.625683 AGGGATTGACAGGCAGGGAT 60.626 55.000 0.00 0.00 0.00 3.85
3812 6076 0.466922 GGGATTGACAGGCAGGGATG 60.467 60.000 0.00 0.00 0.00 3.51
3813 6077 0.548031 GGATTGACAGGCAGGGATGA 59.452 55.000 0.00 0.00 0.00 2.92
3815 6079 1.211457 GATTGACAGGCAGGGATGAGT 59.789 52.381 0.00 0.00 0.00 3.41
3816 6080 1.951209 TTGACAGGCAGGGATGAGTA 58.049 50.000 0.00 0.00 0.00 2.59
3817 6081 1.195115 TGACAGGCAGGGATGAGTAC 58.805 55.000 0.00 0.00 0.00 2.73
3820 6084 1.001760 AGGCAGGGATGAGTACCGT 59.998 57.895 0.00 0.00 31.46 4.83
3821 6085 1.043673 AGGCAGGGATGAGTACCGTC 61.044 60.000 0.00 0.00 31.46 4.79
3822 6086 1.327690 GGCAGGGATGAGTACCGTCA 61.328 60.000 0.00 0.00 31.46 4.35
3823 6087 0.179108 GCAGGGATGAGTACCGTCAC 60.179 60.000 0.00 0.00 34.36 3.67
3824 6088 0.460311 CAGGGATGAGTACCGTCACC 59.540 60.000 3.11 0.00 34.70 4.02
3825 6089 0.040646 AGGGATGAGTACCGTCACCA 59.959 55.000 3.11 0.00 34.70 4.17
3826 6090 0.175073 GGGATGAGTACCGTCACCAC 59.825 60.000 0.00 0.00 32.38 4.16
3827 6091 0.179145 GGATGAGTACCGTCACCACG 60.179 60.000 0.00 0.00 46.29 4.94
3836 6100 3.398920 GTCACCACGATCGCCATG 58.601 61.111 16.60 10.79 0.00 3.66
3837 6101 2.511373 TCACCACGATCGCCATGC 60.511 61.111 16.60 0.00 0.00 4.06
3840 6104 2.969238 CCACGATCGCCATGCTCC 60.969 66.667 16.60 0.00 0.00 4.70
3842 6106 1.815003 CACGATCGCCATGCTCCAA 60.815 57.895 16.60 0.00 0.00 3.53
3843 6107 1.522355 ACGATCGCCATGCTCCAAG 60.522 57.895 16.60 0.00 0.00 3.61
3844 6108 1.522355 CGATCGCCATGCTCCAAGT 60.522 57.895 0.26 0.00 0.00 3.16
3845 6109 1.493950 CGATCGCCATGCTCCAAGTC 61.494 60.000 0.26 0.00 0.00 3.01
3846 6110 1.493950 GATCGCCATGCTCCAAGTCG 61.494 60.000 0.00 0.00 0.00 4.18
3848 6112 2.825836 GCCATGCTCCAAGTCGGG 60.826 66.667 0.00 0.00 34.36 5.14
3849 6113 2.989639 CCATGCTCCAAGTCGGGA 59.010 61.111 0.00 0.00 34.36 5.14
3850 6114 1.299648 CCATGCTCCAAGTCGGGAA 59.700 57.895 0.00 0.00 36.27 3.97
3851 6115 1.026718 CCATGCTCCAAGTCGGGAAC 61.027 60.000 0.00 0.00 36.27 3.62
3852 6116 0.036010 CATGCTCCAAGTCGGGAACT 60.036 55.000 0.00 0.00 41.10 3.01
3853 6117 0.036010 ATGCTCCAAGTCGGGAACTG 60.036 55.000 0.00 0.00 38.58 3.16
3854 6118 1.118965 TGCTCCAAGTCGGGAACTGA 61.119 55.000 0.00 0.00 44.24 3.41
3861 6125 3.362262 TCGGGAACTGACACCTCG 58.638 61.111 0.00 0.00 39.80 4.63
3862 6126 1.529948 TCGGGAACTGACACCTCGT 60.530 57.895 0.00 0.00 39.80 4.18
3863 6127 0.250858 TCGGGAACTGACACCTCGTA 60.251 55.000 0.00 0.00 39.80 3.43
3864 6128 0.599558 CGGGAACTGACACCTCGTAA 59.400 55.000 0.00 0.00 36.31 3.18
3865 6129 1.203994 CGGGAACTGACACCTCGTAAT 59.796 52.381 0.00 0.00 36.31 1.89
3866 6130 2.424601 CGGGAACTGACACCTCGTAATA 59.575 50.000 0.00 0.00 36.31 0.98
3867 6131 3.067742 CGGGAACTGACACCTCGTAATAT 59.932 47.826 0.00 0.00 36.31 1.28
3868 6132 4.369182 GGGAACTGACACCTCGTAATATG 58.631 47.826 0.00 0.00 0.00 1.78
3869 6133 4.098960 GGGAACTGACACCTCGTAATATGA 59.901 45.833 0.00 0.00 0.00 2.15
3870 6134 5.221461 GGGAACTGACACCTCGTAATATGAT 60.221 44.000 0.00 0.00 0.00 2.45
3871 6135 5.692204 GGAACTGACACCTCGTAATATGATG 59.308 44.000 0.00 0.00 0.00 3.07
3872 6136 5.201713 ACTGACACCTCGTAATATGATGG 57.798 43.478 0.00 0.00 0.00 3.51
3873 6137 4.039245 ACTGACACCTCGTAATATGATGGG 59.961 45.833 0.00 0.00 0.00 4.00
3874 6138 4.219919 TGACACCTCGTAATATGATGGGA 58.780 43.478 0.00 0.00 0.00 4.37
3875 6139 4.038763 TGACACCTCGTAATATGATGGGAC 59.961 45.833 0.00 0.00 0.00 4.46
3876 6140 3.005472 ACACCTCGTAATATGATGGGACG 59.995 47.826 0.00 0.00 34.90 4.79
3877 6141 2.029290 ACCTCGTAATATGATGGGACGC 60.029 50.000 0.00 0.00 33.64 5.19
3878 6142 2.231478 CCTCGTAATATGATGGGACGCT 59.769 50.000 0.00 0.00 33.64 5.07
3879 6143 3.306088 CCTCGTAATATGATGGGACGCTT 60.306 47.826 0.00 0.00 33.64 4.68
3880 6144 3.909430 TCGTAATATGATGGGACGCTTC 58.091 45.455 0.00 0.00 33.64 3.86
3881 6145 2.661675 CGTAATATGATGGGACGCTTCG 59.338 50.000 1.71 0.00 0.00 3.79
3912 6176 3.430862 GCCGTGCAGCCGATTTCA 61.431 61.111 4.99 0.00 0.00 2.69
3915 6179 0.523968 CCGTGCAGCCGATTTCATTG 60.524 55.000 4.99 0.00 0.00 2.82
3920 6184 0.179129 CAGCCGATTTCATTGTGCCC 60.179 55.000 0.00 0.00 0.00 5.36
3921 6185 0.323725 AGCCGATTTCATTGTGCCCT 60.324 50.000 0.00 0.00 0.00 5.19
3922 6186 0.179129 GCCGATTTCATTGTGCCCTG 60.179 55.000 0.00 0.00 0.00 4.45
3926 6190 1.547372 GATTTCATTGTGCCCTGCTGT 59.453 47.619 0.00 0.00 0.00 4.40
3927 6191 1.412079 TTTCATTGTGCCCTGCTGTT 58.588 45.000 0.00 0.00 0.00 3.16
3930 6194 1.068895 TCATTGTGCCCTGCTGTTTTG 59.931 47.619 0.00 0.00 0.00 2.44
3931 6195 0.393820 ATTGTGCCCTGCTGTTTTGG 59.606 50.000 0.00 0.00 0.00 3.28
3932 6196 0.685785 TTGTGCCCTGCTGTTTTGGA 60.686 50.000 0.00 0.00 0.00 3.53
3933 6197 1.108727 TGTGCCCTGCTGTTTTGGAG 61.109 55.000 0.00 0.00 0.00 3.86
3934 6198 1.531365 TGCCCTGCTGTTTTGGAGG 60.531 57.895 0.00 0.00 43.93 4.30
3936 6200 4.102113 CCTGCTGTTTTGGAGGGG 57.898 61.111 0.00 0.00 41.15 4.79
3937 6201 1.460255 CCTGCTGTTTTGGAGGGGA 59.540 57.895 0.00 0.00 41.15 4.81
3938 6202 0.178964 CCTGCTGTTTTGGAGGGGAA 60.179 55.000 0.00 0.00 41.15 3.97
3939 6203 1.703411 CTGCTGTTTTGGAGGGGAAA 58.297 50.000 0.00 0.00 0.00 3.13
3940 6204 1.615392 CTGCTGTTTTGGAGGGGAAAG 59.385 52.381 0.00 0.00 0.00 2.62
3941 6205 0.969149 GCTGTTTTGGAGGGGAAAGG 59.031 55.000 0.00 0.00 0.00 3.11
3942 6206 1.632589 CTGTTTTGGAGGGGAAAGGG 58.367 55.000 0.00 0.00 0.00 3.95
3943 6207 0.189822 TGTTTTGGAGGGGAAAGGGG 59.810 55.000 0.00 0.00 0.00 4.79
3944 6208 0.485543 GTTTTGGAGGGGAAAGGGGA 59.514 55.000 0.00 0.00 0.00 4.81
3945 6209 1.078823 GTTTTGGAGGGGAAAGGGGAT 59.921 52.381 0.00 0.00 0.00 3.85
3946 6210 1.007607 TTTGGAGGGGAAAGGGGATC 58.992 55.000 0.00 0.00 0.00 3.36
3947 6211 0.123266 TTGGAGGGGAAAGGGGATCT 59.877 55.000 0.00 0.00 0.00 2.75
3948 6212 0.624500 TGGAGGGGAAAGGGGATCTG 60.625 60.000 0.00 0.00 0.00 2.90
3949 6213 1.356494 GGAGGGGAAAGGGGATCTGG 61.356 65.000 0.00 0.00 0.00 3.86
3967 6231 3.071580 GAGGAGCTCCAAATCCACG 57.928 57.895 33.90 0.00 38.12 4.94
3990 6255 1.298041 CCGCTGCAACGTCGTTTTT 60.298 52.632 8.15 0.00 0.00 1.94
4006 6271 2.472695 TTTTGGGGATCACAGACTCG 57.527 50.000 0.00 0.00 0.00 4.18
4007 6272 0.613260 TTTGGGGATCACAGACTCGG 59.387 55.000 0.00 0.00 0.00 4.63
4008 6273 0.544357 TTGGGGATCACAGACTCGGT 60.544 55.000 0.00 0.00 0.00 4.69
4016 6281 1.067565 TCACAGACTCGGTGAGATTGC 60.068 52.381 7.83 0.00 40.16 3.56
4019 6284 0.108424 AGACTCGGTGAGATTGCTGC 60.108 55.000 0.00 0.00 33.32 5.25
4021 6286 0.108424 ACTCGGTGAGATTGCTGCTC 60.108 55.000 0.00 0.00 33.32 4.26
4025 6290 1.086634 GGTGAGATTGCTGCTCGTCC 61.087 60.000 0.00 0.00 35.15 4.79
4026 6291 0.108424 GTGAGATTGCTGCTCGTCCT 60.108 55.000 0.00 0.00 35.15 3.85
4027 6292 0.108472 TGAGATTGCTGCTCGTCCTG 60.108 55.000 0.00 0.00 35.15 3.86
4028 6293 0.108424 GAGATTGCTGCTCGTCCTGT 60.108 55.000 0.00 0.00 0.00 4.00
4030 6295 0.723981 GATTGCTGCTCGTCCTGTTC 59.276 55.000 0.00 0.00 0.00 3.18
4031 6296 0.035317 ATTGCTGCTCGTCCTGTTCA 59.965 50.000 0.00 0.00 0.00 3.18
4032 6297 0.880278 TTGCTGCTCGTCCTGTTCAC 60.880 55.000 0.00 0.00 0.00 3.18
4033 6298 1.300931 GCTGCTCGTCCTGTTCACA 60.301 57.895 0.00 0.00 0.00 3.58
4034 6299 1.560860 GCTGCTCGTCCTGTTCACAC 61.561 60.000 0.00 0.00 0.00 3.82
4035 6300 0.249447 CTGCTCGTCCTGTTCACACA 60.249 55.000 0.00 0.00 0.00 3.72
4036 6301 0.529773 TGCTCGTCCTGTTCACACAC 60.530 55.000 0.00 0.00 0.00 3.82
4037 6302 1.222115 GCTCGTCCTGTTCACACACC 61.222 60.000 0.00 0.00 0.00 4.16
4038 6303 0.389391 CTCGTCCTGTTCACACACCT 59.611 55.000 0.00 0.00 0.00 4.00
4039 6304 1.611977 CTCGTCCTGTTCACACACCTA 59.388 52.381 0.00 0.00 0.00 3.08
4040 6305 1.338973 TCGTCCTGTTCACACACCTAC 59.661 52.381 0.00 0.00 0.00 3.18
4041 6306 1.340248 CGTCCTGTTCACACACCTACT 59.660 52.381 0.00 0.00 0.00 2.57
4042 6307 2.223971 CGTCCTGTTCACACACCTACTT 60.224 50.000 0.00 0.00 0.00 2.24
4043 6308 3.391049 GTCCTGTTCACACACCTACTTC 58.609 50.000 0.00 0.00 0.00 3.01
4044 6309 3.035363 TCCTGTTCACACACCTACTTCA 58.965 45.455 0.00 0.00 0.00 3.02
4047 6312 4.929808 CCTGTTCACACACCTACTTCATAC 59.070 45.833 0.00 0.00 0.00 2.39
4048 6313 5.279506 CCTGTTCACACACCTACTTCATACT 60.280 44.000 0.00 0.00 0.00 2.12
4049 6314 5.538118 TGTTCACACACCTACTTCATACTG 58.462 41.667 0.00 0.00 0.00 2.74
4050 6315 4.188247 TCACACACCTACTTCATACTGC 57.812 45.455 0.00 0.00 0.00 4.40
4051 6316 3.832490 TCACACACCTACTTCATACTGCT 59.168 43.478 0.00 0.00 0.00 4.24
4052 6317 3.928992 CACACACCTACTTCATACTGCTG 59.071 47.826 0.00 0.00 0.00 4.41
4053 6318 3.832490 ACACACCTACTTCATACTGCTGA 59.168 43.478 0.00 0.00 0.00 4.26
4056 6321 5.877012 CACACCTACTTCATACTGCTGAAAT 59.123 40.000 0.00 0.00 34.86 2.17
4057 6322 5.877012 ACACCTACTTCATACTGCTGAAATG 59.123 40.000 0.00 1.26 34.86 2.32
4058 6323 4.878397 ACCTACTTCATACTGCTGAAATGC 59.122 41.667 0.00 0.00 34.86 3.56
4059 6324 4.274459 CCTACTTCATACTGCTGAAATGCC 59.726 45.833 0.00 0.00 34.86 4.40
4060 6325 3.960571 ACTTCATACTGCTGAAATGCCT 58.039 40.909 0.00 0.00 34.86 4.75
4062 6327 3.632643 TCATACTGCTGAAATGCCTGA 57.367 42.857 0.00 0.00 0.00 3.86
4064 6329 4.529897 TCATACTGCTGAAATGCCTGAAT 58.470 39.130 0.00 0.00 0.00 2.57
4065 6330 4.951715 TCATACTGCTGAAATGCCTGAATT 59.048 37.500 0.00 0.00 0.00 2.17
4101 7138 4.396166 GTGTATCCATGACAACCTTCAAGG 59.604 45.833 0.22 0.22 42.49 3.61
4133 7170 7.773489 TTAGATGGAAATGGATGTCACAAAA 57.227 32.000 0.00 0.00 0.00 2.44
4135 7172 4.255833 TGGAAATGGATGTCACAAAAGC 57.744 40.909 0.00 0.00 0.00 3.51
4155 7192 3.495001 AGCTCAGACGTTGTTTAAGCTTC 59.505 43.478 0.00 0.00 35.17 3.86
4164 7201 4.664188 GTTGTTTAAGCTTCGTTGGTTCA 58.336 39.130 0.00 0.00 0.00 3.18
4171 7208 1.379527 CTTCGTTGGTTCATAGGCCC 58.620 55.000 0.00 0.00 0.00 5.80
4179 7216 2.441750 TGGTTCATAGGCCCCAGAATAC 59.558 50.000 0.00 0.00 0.00 1.89
4182 7219 2.684943 TCATAGGCCCCAGAATACGAA 58.315 47.619 0.00 0.00 0.00 3.85
4184 7221 3.650942 TCATAGGCCCCAGAATACGAATT 59.349 43.478 0.00 0.00 0.00 2.17
4185 7222 2.640316 AGGCCCCAGAATACGAATTC 57.360 50.000 0.00 0.00 41.65 2.17
4242 7284 5.598005 TCAACCTTTTGTCAGATGGTCAAAT 59.402 36.000 1.85 0.00 34.02 2.32
4248 7290 7.925483 CCTTTTGTCAGATGGTCAAATTTTACA 59.075 33.333 4.96 0.00 32.41 2.41
4249 7291 8.641499 TTTTGTCAGATGGTCAAATTTTACAC 57.359 30.769 4.96 0.00 32.41 2.90
4250 7292 7.581213 TTGTCAGATGGTCAAATTTTACACT 57.419 32.000 4.96 0.00 0.00 3.55
4275 7317 4.944619 TTTTTGTAATGTCCACATGGCA 57.055 36.364 0.00 0.00 36.56 4.92
4276 7318 4.944619 TTTTGTAATGTCCACATGGCAA 57.055 36.364 0.00 0.00 36.56 4.52
4277 7319 4.944619 TTTGTAATGTCCACATGGCAAA 57.055 36.364 13.50 13.50 37.88 3.68
4278 7320 4.944619 TTGTAATGTCCACATGGCAAAA 57.055 36.364 0.00 0.00 36.56 2.44
4279 7321 4.250116 TGTAATGTCCACATGGCAAAAC 57.750 40.909 0.00 0.00 36.56 2.43
4280 7322 3.638627 TGTAATGTCCACATGGCAAAACA 59.361 39.130 0.00 2.07 36.56 2.83
4281 7323 3.834489 AATGTCCACATGGCAAAACAA 57.166 38.095 0.00 0.00 36.56 2.83
4282 7324 4.354893 AATGTCCACATGGCAAAACAAT 57.645 36.364 0.00 0.00 36.56 2.71
4283 7325 3.383620 TGTCCACATGGCAAAACAATC 57.616 42.857 0.00 0.00 34.44 2.67
4284 7326 2.697229 TGTCCACATGGCAAAACAATCA 59.303 40.909 0.00 0.00 34.44 2.57
4285 7327 3.324268 TGTCCACATGGCAAAACAATCAT 59.676 39.130 0.00 0.00 34.44 2.45
4286 7328 3.680937 GTCCACATGGCAAAACAATCATG 59.319 43.478 0.00 0.00 41.74 3.07
4288 7330 4.202336 TCCACATGGCAAAACAATCATGTT 60.202 37.500 5.23 0.00 45.19 2.71
4289 7331 5.011431 TCCACATGGCAAAACAATCATGTTA 59.989 36.000 5.23 0.00 45.19 2.41
4290 7332 6.463472 TCCACATGGCAAAACAATCATGTTAA 60.463 34.615 5.23 0.00 45.19 2.01
4291 7333 8.217381 TCCACATGGCAAAACAATCATGTTAAG 61.217 37.037 5.23 0.00 45.19 1.85
4303 7345 8.225603 ACAATCATGTTAAGTCTTTGTTGAGT 57.774 30.769 0.00 0.00 35.91 3.41
4304 7346 8.686334 ACAATCATGTTAAGTCTTTGTTGAGTT 58.314 29.630 0.00 0.00 35.91 3.01
4305 7347 9.173939 CAATCATGTTAAGTCTTTGTTGAGTTC 57.826 33.333 0.00 0.00 32.52 3.01
4306 7348 7.259290 TCATGTTAAGTCTTTGTTGAGTTCC 57.741 36.000 0.00 0.00 32.52 3.62
4307 7349 7.054124 TCATGTTAAGTCTTTGTTGAGTTCCT 58.946 34.615 0.00 0.00 32.52 3.36
4308 7350 7.556275 TCATGTTAAGTCTTTGTTGAGTTCCTT 59.444 33.333 0.00 0.00 32.52 3.36
4309 7351 7.316544 TGTTAAGTCTTTGTTGAGTTCCTTC 57.683 36.000 0.00 0.00 32.52 3.46
4310 7352 7.110155 TGTTAAGTCTTTGTTGAGTTCCTTCT 58.890 34.615 0.00 0.00 32.52 2.85
4311 7353 7.280205 TGTTAAGTCTTTGTTGAGTTCCTTCTC 59.720 37.037 0.00 0.00 32.52 2.87
4312 7354 5.359194 AGTCTTTGTTGAGTTCCTTCTCA 57.641 39.130 0.00 0.00 41.85 3.27
4313 7355 5.363939 AGTCTTTGTTGAGTTCCTTCTCAG 58.636 41.667 0.00 0.00 43.85 3.35
4314 7356 5.129485 AGTCTTTGTTGAGTTCCTTCTCAGA 59.871 40.000 0.00 0.00 43.85 3.27
4315 7357 5.994668 GTCTTTGTTGAGTTCCTTCTCAGAT 59.005 40.000 0.00 0.00 43.85 2.90
4316 7358 6.484977 GTCTTTGTTGAGTTCCTTCTCAGATT 59.515 38.462 0.00 0.00 43.85 2.40
4317 7359 7.012799 GTCTTTGTTGAGTTCCTTCTCAGATTT 59.987 37.037 0.00 0.00 43.85 2.17
4318 7360 6.867662 TTGTTGAGTTCCTTCTCAGATTTC 57.132 37.500 0.00 0.00 43.85 2.17
4319 7361 5.928976 TGTTGAGTTCCTTCTCAGATTTCA 58.071 37.500 0.00 0.00 43.85 2.69
4320 7362 5.994054 TGTTGAGTTCCTTCTCAGATTTCAG 59.006 40.000 0.00 0.00 43.85 3.02
4321 7363 6.183361 TGTTGAGTTCCTTCTCAGATTTCAGA 60.183 38.462 0.00 0.00 43.85 3.27
4322 7364 6.035368 TGAGTTCCTTCTCAGATTTCAGAG 57.965 41.667 0.00 0.00 39.20 3.35
4323 7365 5.541868 TGAGTTCCTTCTCAGATTTCAGAGT 59.458 40.000 0.68 0.00 39.20 3.24
4324 7366 5.792741 AGTTCCTTCTCAGATTTCAGAGTG 58.207 41.667 0.68 0.00 32.20 3.51
4325 7367 4.815533 TCCTTCTCAGATTTCAGAGTGG 57.184 45.455 0.68 4.83 32.20 4.00
4326 7368 4.420206 TCCTTCTCAGATTTCAGAGTGGA 58.580 43.478 10.67 10.67 34.25 4.02
4327 7369 5.028802 TCCTTCTCAGATTTCAGAGTGGAT 58.971 41.667 10.67 0.00 33.03 3.41
4328 7370 5.486775 TCCTTCTCAGATTTCAGAGTGGATT 59.513 40.000 10.67 0.00 33.03 3.01
4329 7371 5.585445 CCTTCTCAGATTTCAGAGTGGATTG 59.415 44.000 0.68 0.00 31.70 2.67
4330 7372 5.095145 TCTCAGATTTCAGAGTGGATTGG 57.905 43.478 0.68 0.00 32.20 3.16
4331 7373 4.779489 TCTCAGATTTCAGAGTGGATTGGA 59.221 41.667 0.68 0.00 32.20 3.53
4332 7374 5.427806 TCTCAGATTTCAGAGTGGATTGGAT 59.572 40.000 0.68 0.00 32.20 3.41
4333 7375 6.069789 TCTCAGATTTCAGAGTGGATTGGATT 60.070 38.462 0.68 0.00 32.20 3.01
4334 7376 6.487828 TCAGATTTCAGAGTGGATTGGATTT 58.512 36.000 0.00 0.00 0.00 2.17
4335 7377 6.376299 TCAGATTTCAGAGTGGATTGGATTTG 59.624 38.462 0.00 0.00 0.00 2.32
4336 7378 6.152323 CAGATTTCAGAGTGGATTGGATTTGT 59.848 38.462 0.00 0.00 0.00 2.83
4337 7379 7.337689 CAGATTTCAGAGTGGATTGGATTTGTA 59.662 37.037 0.00 0.00 0.00 2.41
4338 7380 7.555554 AGATTTCAGAGTGGATTGGATTTGTAG 59.444 37.037 0.00 0.00 0.00 2.74
4339 7381 5.102953 TCAGAGTGGATTGGATTTGTAGG 57.897 43.478 0.00 0.00 0.00 3.18
4340 7382 4.536090 TCAGAGTGGATTGGATTTGTAGGT 59.464 41.667 0.00 0.00 0.00 3.08
4341 7383 4.878397 CAGAGTGGATTGGATTTGTAGGTC 59.122 45.833 0.00 0.00 0.00 3.85
4342 7384 4.785376 AGAGTGGATTGGATTTGTAGGTCT 59.215 41.667 0.00 0.00 0.00 3.85
4343 7385 4.848357 AGTGGATTGGATTTGTAGGTCTG 58.152 43.478 0.00 0.00 0.00 3.51
4344 7386 3.378427 GTGGATTGGATTTGTAGGTCTGC 59.622 47.826 0.00 0.00 0.00 4.26
4345 7387 3.266772 TGGATTGGATTTGTAGGTCTGCT 59.733 43.478 0.00 0.00 0.00 4.24
4346 7388 4.473196 TGGATTGGATTTGTAGGTCTGCTA 59.527 41.667 0.00 0.00 0.00 3.49
4347 7389 5.045213 TGGATTGGATTTGTAGGTCTGCTAA 60.045 40.000 0.00 0.00 0.00 3.09
4348 7390 6.064717 GGATTGGATTTGTAGGTCTGCTAAT 58.935 40.000 0.00 0.00 0.00 1.73
4349 7391 6.016777 GGATTGGATTTGTAGGTCTGCTAATG 60.017 42.308 1.42 0.00 0.00 1.90
4350 7392 5.435686 TGGATTTGTAGGTCTGCTAATGT 57.564 39.130 1.42 0.00 0.00 2.71
4351 7393 5.815581 TGGATTTGTAGGTCTGCTAATGTT 58.184 37.500 1.42 0.00 0.00 2.71
4352 7394 5.647658 TGGATTTGTAGGTCTGCTAATGTTG 59.352 40.000 1.42 0.00 0.00 3.33
4353 7395 5.449177 GGATTTGTAGGTCTGCTAATGTTGC 60.449 44.000 1.42 0.00 0.00 4.17
4354 7396 2.985896 TGTAGGTCTGCTAATGTTGCC 58.014 47.619 0.00 0.00 0.00 4.52
4355 7397 1.933853 GTAGGTCTGCTAATGTTGCCG 59.066 52.381 0.00 0.00 0.00 5.69
4356 7398 1.026718 AGGTCTGCTAATGTTGCCGC 61.027 55.000 0.00 0.00 0.00 6.53
4357 7399 1.060937 GTCTGCTAATGTTGCCGCG 59.939 57.895 0.00 0.00 0.00 6.46
4358 7400 2.277501 CTGCTAATGTTGCCGCGC 60.278 61.111 0.00 0.00 0.00 6.86
4359 7401 3.037992 CTGCTAATGTTGCCGCGCA 62.038 57.895 8.75 0.00 36.47 6.09
4360 7402 2.327002 CTGCTAATGTTGCCGCGCAT 62.327 55.000 8.75 0.00 38.76 4.73
4361 7403 1.092345 TGCTAATGTTGCCGCGCATA 61.092 50.000 8.75 0.00 38.76 3.14
4362 7404 0.028770 GCTAATGTTGCCGCGCATAA 59.971 50.000 8.75 0.00 38.76 1.90
4363 7405 1.532921 GCTAATGTTGCCGCGCATAAA 60.533 47.619 8.75 0.00 38.76 1.40
4364 7406 2.858260 GCTAATGTTGCCGCGCATAAAT 60.858 45.455 8.75 0.00 38.76 1.40
4365 7407 1.838913 AATGTTGCCGCGCATAAATC 58.161 45.000 8.75 0.00 38.76 2.17
4366 7408 1.024271 ATGTTGCCGCGCATAAATCT 58.976 45.000 8.75 0.00 38.76 2.40
4367 7409 0.098552 TGTTGCCGCGCATAAATCTG 59.901 50.000 8.75 0.00 38.76 2.90
4368 7410 1.063972 TTGCCGCGCATAAATCTGC 59.936 52.632 8.75 0.00 38.76 4.26
4369 7411 1.652167 TTGCCGCGCATAAATCTGCA 61.652 50.000 8.75 0.00 42.40 4.41
4370 7412 1.063972 GCCGCGCATAAATCTGCAA 59.936 52.632 8.75 0.00 42.40 4.08
4371 7413 0.525242 GCCGCGCATAAATCTGCAAA 60.525 50.000 8.75 0.00 42.40 3.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
322 324 5.220892 GGTTTCGTCATGTTGGTTACAAAGA 60.221 40.000 0.00 0.00 40.89 2.52
328 330 4.822350 TGAATGGTTTCGTCATGTTGGTTA 59.178 37.500 0.00 0.00 34.39 2.85
386 388 1.797320 CTCCCCATCCAATGCCAAAT 58.203 50.000 0.00 0.00 0.00 2.32
416 423 4.821589 GGGCTCGAAGTCAGGCCG 62.822 72.222 0.00 0.00 45.87 6.13
657 668 0.387622 CTGCATCAAAACCTGCCGTG 60.388 55.000 0.00 0.00 37.59 4.94
658 669 0.537143 TCTGCATCAAAACCTGCCGT 60.537 50.000 0.00 0.00 37.59 5.68
659 670 0.169672 CTCTGCATCAAAACCTGCCG 59.830 55.000 0.00 0.00 37.59 5.69
660 671 0.529378 CCTCTGCATCAAAACCTGCC 59.471 55.000 0.00 0.00 37.59 4.85
661 672 1.200948 GTCCTCTGCATCAAAACCTGC 59.799 52.381 0.00 0.00 38.87 4.85
662 673 1.466167 CGTCCTCTGCATCAAAACCTG 59.534 52.381 0.00 0.00 0.00 4.00
674 685 4.087892 CTGGCCCACCGTCCTCTG 62.088 72.222 0.00 0.00 39.70 3.35
690 701 5.641209 GCAAACAAGTCACTACTCATGATCT 59.359 40.000 0.00 0.00 33.75 2.75
708 719 1.821759 CGACACCACCAGGCAAACA 60.822 57.895 0.00 0.00 39.06 2.83
710 721 0.180642 TTACGACACCACCAGGCAAA 59.819 50.000 0.00 0.00 39.06 3.68
751 766 3.871594 GACTCCCAAATCCACGATTACAG 59.128 47.826 0.00 0.00 31.46 2.74
908 925 2.837883 CGATGCTGAAATGGGCCGG 61.838 63.158 0.00 0.00 0.00 6.13
1088 1105 2.154007 CGCTAACGCTAGATTGCTAAGC 59.846 50.000 0.00 0.00 0.00 3.09
1102 1119 3.426117 ATGGACGGAGGCGCTAACG 62.426 63.158 7.64 11.99 44.07 3.18
1417 1434 2.284150 GCGGAACCAACAAAAGAAAAGC 59.716 45.455 0.00 0.00 0.00 3.51
1426 1443 4.912485 TCGCGGCGGAACCAACAA 62.912 61.111 23.46 0.00 39.03 2.83
1468 1511 3.263937 AGGCCAACGTTACCCTACAAATA 59.736 43.478 15.13 0.00 0.00 1.40
1568 1611 1.405526 GCAGAATAAGTCGAGGGCACA 60.406 52.381 0.00 0.00 0.00 4.57
1569 1612 1.134670 AGCAGAATAAGTCGAGGGCAC 60.135 52.381 0.00 0.00 0.00 5.01
1572 1615 7.657761 ACATAATAAAGCAGAATAAGTCGAGGG 59.342 37.037 0.00 0.00 0.00 4.30
1579 1622 8.450578 TCCACCACATAATAAAGCAGAATAAG 57.549 34.615 0.00 0.00 0.00 1.73
1587 1630 5.284079 CAGCAATCCACCACATAATAAAGC 58.716 41.667 0.00 0.00 0.00 3.51
1588 1631 5.360714 ACCAGCAATCCACCACATAATAAAG 59.639 40.000 0.00 0.00 0.00 1.85
1589 1632 5.268387 ACCAGCAATCCACCACATAATAAA 58.732 37.500 0.00 0.00 0.00 1.40
1613 1656 7.482169 TCTCTCTCCATTAACCGCAATATAT 57.518 36.000 0.00 0.00 0.00 0.86
1640 1684 1.065928 GCTCATCACGGACGTAGGG 59.934 63.158 0.00 0.00 0.00 3.53
1658 1702 6.346919 GGCTACATTTCTAGCGATACATGTTG 60.347 42.308 2.30 0.00 40.21 3.33
1688 1732 6.828785 ACAGGAATAATAAACAGACCACATCC 59.171 38.462 0.00 0.00 0.00 3.51
1720 1774 2.603075 AAACTTAGGCAAGGGCATCA 57.397 45.000 0.00 0.00 43.71 3.07
1724 1778 6.321435 ACAATATTCTAAACTTAGGCAAGGGC 59.679 38.462 0.00 0.00 35.97 5.19
1859 1914 3.554324 CACATAAAAGCATGGCAGCATTC 59.446 43.478 10.71 0.00 36.85 2.67
1862 1917 1.894466 ACACATAAAAGCATGGCAGCA 59.106 42.857 10.71 0.00 36.85 4.41
1871 3402 5.634859 ACAGCTAAATTGCACACATAAAAGC 59.365 36.000 0.00 0.00 34.99 3.51
1898 3429 6.662414 TTGACATACATACTTGTTGCTAGC 57.338 37.500 8.10 8.10 37.28 3.42
1932 3463 7.288810 TCTAAACTTGCCAATTTGACAGAAT 57.711 32.000 0.00 0.00 0.00 2.40
2095 4133 2.175811 GCCAACCTGCGCGTAAAG 59.824 61.111 8.43 3.06 0.00 1.85
2227 4306 4.044426 GACACAAAAGCATCCACTGAAAC 58.956 43.478 0.00 0.00 0.00 2.78
2466 4555 0.687354 GAACCTCAGGGCTGAAGACA 59.313 55.000 0.00 0.00 39.39 3.41
2493 4582 3.245622 TGTCCATCAGGTCTTCCTCAGTA 60.246 47.826 0.00 0.00 43.07 2.74
2589 4678 0.523072 ATGCGTTGAGGAACATGTGC 59.477 50.000 0.00 0.00 31.78 4.57
2733 4822 8.579006 TCAAGACAAATTCTAATGCATGTTTCT 58.421 29.630 0.00 0.00 32.51 2.52
2761 4851 8.970691 AAATAAACACACAGTTCATGCTATTC 57.029 30.769 0.00 0.00 40.26 1.75
2765 4855 7.510549 ACTAAATAAACACACAGTTCATGCT 57.489 32.000 0.00 0.00 40.26 3.79
2827 5042 8.739972 GCTCCAGAATTGGTTAGAAAAGAATAA 58.260 33.333 0.00 0.00 45.26 1.40
2829 5044 6.950619 AGCTCCAGAATTGGTTAGAAAAGAAT 59.049 34.615 0.00 0.00 45.26 2.40
2863 5078 5.951747 AGGCTAACACAATCCAAACATATGT 59.048 36.000 1.41 1.41 0.00 2.29
2864 5079 6.319658 AGAGGCTAACACAATCCAAACATATG 59.680 38.462 0.00 0.00 0.00 1.78
2897 5112 2.811431 CACCGCAAGATTACACAAAGGA 59.189 45.455 0.00 0.00 43.02 3.36
2915 5131 4.632153 ACTAAAGACACATCTCACACACC 58.368 43.478 0.00 0.00 32.34 4.16
2998 5227 6.038356 GCTAACAATGATGCAGTTGCTAATT 58.962 36.000 5.62 0.57 42.66 1.40
3001 5230 3.063861 CGCTAACAATGATGCAGTTGCTA 59.936 43.478 5.62 2.11 42.66 3.49
3036 5265 5.336849 GCTATAGTAGGAAGAACCATGCGAT 60.337 44.000 0.84 0.00 42.04 4.58
3057 5286 7.927629 GGAAATGCATGATTCAAAATTAGGCTA 59.072 33.333 12.09 0.00 0.00 3.93
3067 5296 5.186215 ACTGACATGGAAATGCATGATTCAA 59.814 36.000 19.83 2.53 33.38 2.69
3105 5335 3.474942 TGCACAGCAGAAGAACACA 57.525 47.368 0.00 0.00 33.32 3.72
3193 5423 3.625211 CGTCCTTCTTCTCCTCCTCCTTA 60.625 52.174 0.00 0.00 0.00 2.69
3279 5509 1.594331 AAACTGGCGACTTGAAGGAC 58.406 50.000 0.00 0.00 0.00 3.85
3325 5568 8.801882 TTGTTCAAGGTAATAATAGGACTTGG 57.198 34.615 0.00 0.00 36.78 3.61
3381 5625 6.790350 GCATGACATAACGTTAACATATTCGG 59.210 38.462 12.81 7.47 0.00 4.30
3508 5753 5.046910 ACCATTATTTTGCTGTCTGAACG 57.953 39.130 0.00 0.00 0.00 3.95
3519 5764 7.537715 TGACTTGCACAGATACCATTATTTTG 58.462 34.615 0.00 0.00 0.00 2.44
3523 5784 6.239217 TCTGACTTGCACAGATACCATTAT 57.761 37.500 1.56 0.00 39.10 1.28
3537 5798 6.983890 TCCCAAAAACTTAAAATCTGACTTGC 59.016 34.615 0.00 0.00 0.00 4.01
3573 5834 0.894835 ATTCCATCCAACGGCCAAAC 59.105 50.000 2.24 0.00 0.00 2.93
3582 5843 1.391577 CATCGGTGCATTCCATCCAA 58.608 50.000 0.00 0.00 0.00 3.53
3601 5862 2.260743 GCCAAGGCTTGCTTCAGC 59.739 61.111 21.77 14.89 39.28 4.26
3618 5879 2.152699 CGCTCGCTAGGTTGACACG 61.153 63.158 0.00 0.00 0.00 4.49
3619 5880 0.179134 ATCGCTCGCTAGGTTGACAC 60.179 55.000 0.00 0.00 0.00 3.67
3621 5882 1.588861 GAAATCGCTCGCTAGGTTGAC 59.411 52.381 0.00 0.00 0.00 3.18
3628 5889 1.201414 TGTCACAGAAATCGCTCGCTA 59.799 47.619 0.00 0.00 0.00 4.26
3650 5911 3.454375 AGTGGTGTTGAAAGAGTACACG 58.546 45.455 0.00 0.00 42.29 4.49
3651 5912 3.808174 GGAGTGGTGTTGAAAGAGTACAC 59.192 47.826 0.00 0.00 41.01 2.90
3663 5927 2.567615 GTGATGGTAGAGGAGTGGTGTT 59.432 50.000 0.00 0.00 0.00 3.32
3664 5928 2.180276 GTGATGGTAGAGGAGTGGTGT 58.820 52.381 0.00 0.00 0.00 4.16
3666 5930 1.272536 ACGTGATGGTAGAGGAGTGGT 60.273 52.381 0.00 0.00 0.00 4.16
3670 5934 1.678627 CAGGACGTGATGGTAGAGGAG 59.321 57.143 0.00 0.00 0.00 3.69
3671 5935 1.685180 CCAGGACGTGATGGTAGAGGA 60.685 57.143 0.00 0.00 0.00 3.71
3672 5936 0.747255 CCAGGACGTGATGGTAGAGG 59.253 60.000 0.00 0.00 0.00 3.69
3673 5937 0.103208 GCCAGGACGTGATGGTAGAG 59.897 60.000 15.18 0.00 38.91 2.43
3674 5938 1.663379 CGCCAGGACGTGATGGTAGA 61.663 60.000 15.18 0.00 38.91 2.59
3675 5939 1.226974 CGCCAGGACGTGATGGTAG 60.227 63.158 15.18 7.78 38.91 3.18
3676 5940 1.252215 TTCGCCAGGACGTGATGGTA 61.252 55.000 15.18 3.85 38.91 3.25
3677 5941 2.579657 TTCGCCAGGACGTGATGGT 61.580 57.895 15.18 0.00 38.91 3.55
3678 5942 2.100631 GTTCGCCAGGACGTGATGG 61.101 63.158 10.63 10.63 39.73 3.51
3679 5943 1.078759 GAGTTCGCCAGGACGTGATG 61.079 60.000 0.00 0.00 0.00 3.07
3680 5944 1.215647 GAGTTCGCCAGGACGTGAT 59.784 57.895 0.00 0.00 0.00 3.06
3681 5945 2.649034 GAGTTCGCCAGGACGTGA 59.351 61.111 0.00 0.00 0.00 4.35
3682 5946 2.805353 CGAGTTCGCCAGGACGTG 60.805 66.667 0.00 0.00 0.00 4.49
3683 5947 2.981909 TCGAGTTCGCCAGGACGT 60.982 61.111 0.00 0.00 39.60 4.34
3684 5948 1.642037 TAGTCGAGTTCGCCAGGACG 61.642 60.000 0.00 0.00 39.60 4.79
3685 5949 0.524862 TTAGTCGAGTTCGCCAGGAC 59.475 55.000 0.00 0.00 39.60 3.85
3686 5950 0.524862 GTTAGTCGAGTTCGCCAGGA 59.475 55.000 0.00 0.00 39.60 3.86
3687 5951 0.242825 TGTTAGTCGAGTTCGCCAGG 59.757 55.000 0.00 0.00 39.60 4.45
3688 5952 1.337821 GTGTTAGTCGAGTTCGCCAG 58.662 55.000 0.00 0.00 39.60 4.85
3689 5953 0.038892 GGTGTTAGTCGAGTTCGCCA 60.039 55.000 17.19 1.39 39.60 5.69
3690 5954 0.038892 TGGTGTTAGTCGAGTTCGCC 60.039 55.000 15.98 15.98 39.60 5.54
3691 5955 1.058404 GTGGTGTTAGTCGAGTTCGC 58.942 55.000 0.00 0.00 39.60 4.70
3692 5956 2.582687 GAGTGGTGTTAGTCGAGTTCG 58.417 52.381 0.00 0.00 41.45 3.95
3693 5957 2.557490 AGGAGTGGTGTTAGTCGAGTTC 59.443 50.000 0.00 0.00 0.00 3.01
3694 5958 2.557490 GAGGAGTGGTGTTAGTCGAGTT 59.443 50.000 0.00 0.00 0.00 3.01
3695 5959 2.161030 GAGGAGTGGTGTTAGTCGAGT 58.839 52.381 0.00 0.00 0.00 4.18
3696 5960 2.438411 AGAGGAGTGGTGTTAGTCGAG 58.562 52.381 0.00 0.00 0.00 4.04
3697 5961 2.581216 AGAGGAGTGGTGTTAGTCGA 57.419 50.000 0.00 0.00 0.00 4.20
3698 5962 2.422832 GGTAGAGGAGTGGTGTTAGTCG 59.577 54.545 0.00 0.00 0.00 4.18
3699 5963 3.428532 TGGTAGAGGAGTGGTGTTAGTC 58.571 50.000 0.00 0.00 0.00 2.59
3700 5964 3.537795 TGGTAGAGGAGTGGTGTTAGT 57.462 47.619 0.00 0.00 0.00 2.24
3701 5965 4.023980 TGATGGTAGAGGAGTGGTGTTAG 58.976 47.826 0.00 0.00 0.00 2.34
3702 5966 3.767673 GTGATGGTAGAGGAGTGGTGTTA 59.232 47.826 0.00 0.00 0.00 2.41
3703 5967 2.567615 GTGATGGTAGAGGAGTGGTGTT 59.432 50.000 0.00 0.00 0.00 3.32
3704 5968 2.180276 GTGATGGTAGAGGAGTGGTGT 58.820 52.381 0.00 0.00 0.00 4.16
3705 5969 1.135139 CGTGATGGTAGAGGAGTGGTG 59.865 57.143 0.00 0.00 0.00 4.17
3706 5970 1.272536 ACGTGATGGTAGAGGAGTGGT 60.273 52.381 0.00 0.00 0.00 4.16
3707 5971 1.405821 GACGTGATGGTAGAGGAGTGG 59.594 57.143 0.00 0.00 0.00 4.00
3708 5972 1.405821 GGACGTGATGGTAGAGGAGTG 59.594 57.143 0.00 0.00 0.00 3.51
3709 5973 1.285373 AGGACGTGATGGTAGAGGAGT 59.715 52.381 0.00 0.00 0.00 3.85
3710 5974 1.678627 CAGGACGTGATGGTAGAGGAG 59.321 57.143 0.00 0.00 0.00 3.69
3711 5975 1.685180 CCAGGACGTGATGGTAGAGGA 60.685 57.143 0.00 0.00 0.00 3.71
3712 5976 0.747255 CCAGGACGTGATGGTAGAGG 59.253 60.000 0.00 0.00 0.00 3.69
3717 5981 2.994995 TCGCCAGGACGTGATGGT 60.995 61.111 15.18 0.00 38.91 3.55
3720 5984 3.069980 GAGCTCGCCAGGACGTGAT 62.070 63.158 0.00 3.40 0.00 3.06
3724 5988 4.838486 GTCGAGCTCGCCAGGACG 62.838 72.222 30.97 6.00 39.60 4.79
3725 5989 4.838486 CGTCGAGCTCGCCAGGAC 62.838 72.222 30.97 21.26 39.60 3.85
3786 6050 1.021390 GCCTGTCAATCCCTCACACG 61.021 60.000 0.00 0.00 0.00 4.49
3787 6051 0.036732 TGCCTGTCAATCCCTCACAC 59.963 55.000 0.00 0.00 0.00 3.82
3790 6054 1.565390 CCCTGCCTGTCAATCCCTCA 61.565 60.000 0.00 0.00 0.00 3.86
3793 6057 0.466922 CATCCCTGCCTGTCAATCCC 60.467 60.000 0.00 0.00 0.00 3.85
3797 6061 1.555075 GTACTCATCCCTGCCTGTCAA 59.445 52.381 0.00 0.00 0.00 3.18
3798 6062 1.195115 GTACTCATCCCTGCCTGTCA 58.805 55.000 0.00 0.00 0.00 3.58
3799 6063 0.466124 GGTACTCATCCCTGCCTGTC 59.534 60.000 0.00 0.00 0.00 3.51
3800 6064 1.330655 CGGTACTCATCCCTGCCTGT 61.331 60.000 0.00 0.00 0.00 4.00
3801 6065 1.330655 ACGGTACTCATCCCTGCCTG 61.331 60.000 0.00 0.00 0.00 4.85
3802 6066 1.001760 ACGGTACTCATCCCTGCCT 59.998 57.895 0.00 0.00 0.00 4.75
3803 6067 1.327690 TGACGGTACTCATCCCTGCC 61.328 60.000 0.00 0.00 0.00 4.85
3806 6070 0.040646 TGGTGACGGTACTCATCCCT 59.959 55.000 0.00 0.00 0.00 4.20
3808 6072 0.179145 CGTGGTGACGGTACTCATCC 60.179 60.000 0.00 0.00 42.18 3.51
3809 6073 0.806868 TCGTGGTGACGGTACTCATC 59.193 55.000 0.00 0.00 46.11 2.92
3810 6074 1.404391 GATCGTGGTGACGGTACTCAT 59.596 52.381 0.00 0.00 46.11 2.90
3811 6075 0.806868 GATCGTGGTGACGGTACTCA 59.193 55.000 0.00 0.00 46.11 3.41
3812 6076 0.247974 CGATCGTGGTGACGGTACTC 60.248 60.000 7.03 0.00 46.11 2.59
3813 6077 1.798735 CGATCGTGGTGACGGTACT 59.201 57.895 7.03 0.00 46.11 2.73
3815 6079 2.486504 GCGATCGTGGTGACGGTA 59.513 61.111 17.81 0.00 46.11 4.02
3816 6080 4.430765 GGCGATCGTGGTGACGGT 62.431 66.667 17.81 0.00 46.11 4.83
3817 6081 3.716539 ATGGCGATCGTGGTGACGG 62.717 63.158 17.81 0.00 46.11 4.79
3820 6084 2.511373 GCATGGCGATCGTGGTGA 60.511 61.111 17.81 0.00 33.10 4.02
3821 6085 2.512286 AGCATGGCGATCGTGGTG 60.512 61.111 17.81 13.25 41.10 4.17
3822 6086 2.202932 GAGCATGGCGATCGTGGT 60.203 61.111 17.81 12.71 44.83 4.16
3823 6087 2.969238 GGAGCATGGCGATCGTGG 60.969 66.667 17.81 5.11 33.10 4.94
3824 6088 1.769098 CTTGGAGCATGGCGATCGTG 61.769 60.000 17.81 8.44 35.53 4.35
3825 6089 1.522355 CTTGGAGCATGGCGATCGT 60.522 57.895 17.81 0.00 0.00 3.73
3826 6090 1.493950 GACTTGGAGCATGGCGATCG 61.494 60.000 11.69 11.69 0.00 3.69
3827 6091 1.493950 CGACTTGGAGCATGGCGATC 61.494 60.000 0.00 0.00 41.58 3.69
3828 6092 1.522355 CGACTTGGAGCATGGCGAT 60.522 57.895 0.00 0.00 41.58 4.58
3829 6093 2.125552 CGACTTGGAGCATGGCGA 60.126 61.111 0.00 0.00 41.58 5.54
3830 6094 3.197790 CCGACTTGGAGCATGGCG 61.198 66.667 0.00 0.00 42.00 5.69
3831 6095 2.819984 TTCCCGACTTGGAGCATGGC 62.820 60.000 0.00 0.00 42.00 4.40
3832 6096 1.026718 GTTCCCGACTTGGAGCATGG 61.027 60.000 0.00 0.00 42.00 3.66
3833 6097 0.036010 AGTTCCCGACTTGGAGCATG 60.036 55.000 0.00 0.00 42.00 4.06
3834 6098 0.036010 CAGTTCCCGACTTGGAGCAT 60.036 55.000 0.00 0.00 42.00 3.79
3836 6100 0.670854 GTCAGTTCCCGACTTGGAGC 60.671 60.000 0.00 0.00 42.00 4.70
3837 6101 0.679505 TGTCAGTTCCCGACTTGGAG 59.320 55.000 0.00 0.00 42.00 3.86
3840 6104 0.393077 AGGTGTCAGTTCCCGACTTG 59.607 55.000 0.00 0.00 36.10 3.16
3842 6106 1.524863 CGAGGTGTCAGTTCCCGACT 61.525 60.000 0.00 0.00 39.89 4.18
3843 6107 1.080705 CGAGGTGTCAGTTCCCGAC 60.081 63.158 0.00 0.00 0.00 4.79
3844 6108 0.250858 TACGAGGTGTCAGTTCCCGA 60.251 55.000 0.00 0.00 0.00 5.14
3845 6109 0.599558 TTACGAGGTGTCAGTTCCCG 59.400 55.000 0.00 0.00 0.00 5.14
3846 6110 4.098960 TCATATTACGAGGTGTCAGTTCCC 59.901 45.833 0.00 0.00 0.00 3.97
3848 6112 5.692204 CCATCATATTACGAGGTGTCAGTTC 59.308 44.000 0.00 0.00 0.00 3.01
3849 6113 5.453339 CCCATCATATTACGAGGTGTCAGTT 60.453 44.000 0.00 0.00 0.00 3.16
3850 6114 4.039245 CCCATCATATTACGAGGTGTCAGT 59.961 45.833 0.00 0.00 0.00 3.41
3851 6115 4.280929 TCCCATCATATTACGAGGTGTCAG 59.719 45.833 0.00 0.00 0.00 3.51
3852 6116 4.038763 GTCCCATCATATTACGAGGTGTCA 59.961 45.833 0.00 0.00 0.00 3.58
3853 6117 4.557205 GTCCCATCATATTACGAGGTGTC 58.443 47.826 0.00 0.00 0.00 3.67
3854 6118 3.005472 CGTCCCATCATATTACGAGGTGT 59.995 47.826 0.00 0.00 35.66 4.16
3855 6119 3.575630 CGTCCCATCATATTACGAGGTG 58.424 50.000 0.00 0.00 35.66 4.00
3856 6120 2.029290 GCGTCCCATCATATTACGAGGT 60.029 50.000 0.00 0.00 35.66 3.85
3857 6121 2.231478 AGCGTCCCATCATATTACGAGG 59.769 50.000 0.00 0.00 35.66 4.63
3858 6122 3.577649 AGCGTCCCATCATATTACGAG 57.422 47.619 0.00 0.00 35.66 4.18
3859 6123 3.610821 CGAAGCGTCCCATCATATTACGA 60.611 47.826 0.00 0.00 35.66 3.43
3860 6124 2.661675 CGAAGCGTCCCATCATATTACG 59.338 50.000 0.00 0.00 36.67 3.18
3861 6125 3.650139 ACGAAGCGTCCCATCATATTAC 58.350 45.455 0.00 0.00 33.69 1.89
3863 6127 2.910688 ACGAAGCGTCCCATCATATT 57.089 45.000 0.00 0.00 33.69 1.28
3905 6169 0.813184 AGCAGGGCACAATGAAATCG 59.187 50.000 0.00 0.00 0.00 3.34
3910 6174 1.068895 CAAAACAGCAGGGCACAATGA 59.931 47.619 0.00 0.00 0.00 2.57
3912 6176 0.393820 CCAAAACAGCAGGGCACAAT 59.606 50.000 0.00 0.00 0.00 2.71
3915 6179 1.662044 CTCCAAAACAGCAGGGCAC 59.338 57.895 0.00 0.00 0.00 5.01
3920 6184 1.615392 CTTTCCCCTCCAAAACAGCAG 59.385 52.381 0.00 0.00 0.00 4.24
3921 6185 1.703411 CTTTCCCCTCCAAAACAGCA 58.297 50.000 0.00 0.00 0.00 4.41
3922 6186 0.969149 CCTTTCCCCTCCAAAACAGC 59.031 55.000 0.00 0.00 0.00 4.40
3926 6190 1.361197 GATCCCCTTTCCCCTCCAAAA 59.639 52.381 0.00 0.00 0.00 2.44
3927 6191 1.007607 GATCCCCTTTCCCCTCCAAA 58.992 55.000 0.00 0.00 0.00 3.28
3930 6194 1.356494 CCAGATCCCCTTTCCCCTCC 61.356 65.000 0.00 0.00 0.00 4.30
3931 6195 0.327576 TCCAGATCCCCTTTCCCCTC 60.328 60.000 0.00 0.00 0.00 4.30
3932 6196 0.327964 CTCCAGATCCCCTTTCCCCT 60.328 60.000 0.00 0.00 0.00 4.79
3933 6197 1.356494 CCTCCAGATCCCCTTTCCCC 61.356 65.000 0.00 0.00 0.00 4.81
3934 6198 0.327576 TCCTCCAGATCCCCTTTCCC 60.328 60.000 0.00 0.00 0.00 3.97
3935 6199 1.135960 CTCCTCCAGATCCCCTTTCC 58.864 60.000 0.00 0.00 0.00 3.13
3936 6200 0.472044 GCTCCTCCAGATCCCCTTTC 59.528 60.000 0.00 0.00 0.00 2.62
3937 6201 0.045469 AGCTCCTCCAGATCCCCTTT 59.955 55.000 0.00 0.00 0.00 3.11
3938 6202 0.399806 GAGCTCCTCCAGATCCCCTT 60.400 60.000 0.87 0.00 30.52 3.95
3939 6203 1.235696 GAGCTCCTCCAGATCCCCT 59.764 63.158 0.87 0.00 30.52 4.79
3940 6204 3.884318 GAGCTCCTCCAGATCCCC 58.116 66.667 0.87 0.00 30.52 4.81
3949 6213 0.462759 CCGTGGATTTGGAGCTCCTC 60.463 60.000 32.28 21.41 36.82 3.71
3990 6255 1.078528 ACCGAGTCTGTGATCCCCA 59.921 57.895 0.00 0.00 0.00 4.96
4006 6271 1.086634 GGACGAGCAGCAATCTCACC 61.087 60.000 0.00 0.00 0.00 4.02
4007 6272 0.108424 AGGACGAGCAGCAATCTCAC 60.108 55.000 0.00 0.00 0.00 3.51
4008 6273 0.108472 CAGGACGAGCAGCAATCTCA 60.108 55.000 0.00 0.00 0.00 3.27
4010 6275 0.322975 AACAGGACGAGCAGCAATCT 59.677 50.000 0.00 0.00 0.00 2.40
4011 6276 0.723981 GAACAGGACGAGCAGCAATC 59.276 55.000 0.00 0.00 0.00 2.67
4012 6277 0.035317 TGAACAGGACGAGCAGCAAT 59.965 50.000 0.00 0.00 0.00 3.56
4014 6279 1.300931 GTGAACAGGACGAGCAGCA 60.301 57.895 0.00 0.00 0.00 4.41
4015 6280 1.300931 TGTGAACAGGACGAGCAGC 60.301 57.895 0.00 0.00 0.00 5.25
4016 6281 0.249447 TGTGTGAACAGGACGAGCAG 60.249 55.000 0.00 0.00 0.00 4.24
4019 6284 0.389391 AGGTGTGTGAACAGGACGAG 59.611 55.000 0.00 0.00 0.00 4.18
4021 6286 1.340248 AGTAGGTGTGTGAACAGGACG 59.660 52.381 0.00 0.00 0.00 4.79
4025 6290 5.635280 CAGTATGAAGTAGGTGTGTGAACAG 59.365 44.000 0.00 0.00 39.69 3.16
4026 6291 5.538118 CAGTATGAAGTAGGTGTGTGAACA 58.462 41.667 0.00 0.00 39.69 3.18
4027 6292 4.389077 GCAGTATGAAGTAGGTGTGTGAAC 59.611 45.833 0.00 0.00 39.69 3.18
4028 6293 4.283467 AGCAGTATGAAGTAGGTGTGTGAA 59.717 41.667 0.00 0.00 39.69 3.18
4030 6295 3.928992 CAGCAGTATGAAGTAGGTGTGTG 59.071 47.826 0.00 0.00 39.69 3.82
4031 6296 3.832490 TCAGCAGTATGAAGTAGGTGTGT 59.168 43.478 0.00 0.00 39.69 3.72
4032 6297 4.456280 TCAGCAGTATGAAGTAGGTGTG 57.544 45.455 0.00 0.00 39.69 3.82
4033 6298 5.483685 TTTCAGCAGTATGAAGTAGGTGT 57.516 39.130 0.00 0.00 40.16 4.16
4034 6299 5.220739 GCATTTCAGCAGTATGAAGTAGGTG 60.221 44.000 0.00 0.00 40.16 4.00
4035 6300 4.878397 GCATTTCAGCAGTATGAAGTAGGT 59.122 41.667 0.00 0.00 40.16 3.08
4036 6301 4.274459 GGCATTTCAGCAGTATGAAGTAGG 59.726 45.833 0.00 0.00 40.16 3.18
4037 6302 5.007430 CAGGCATTTCAGCAGTATGAAGTAG 59.993 44.000 0.00 0.00 40.16 2.57
4038 6303 4.877823 CAGGCATTTCAGCAGTATGAAGTA 59.122 41.667 0.00 0.00 40.16 2.24
4039 6304 3.693085 CAGGCATTTCAGCAGTATGAAGT 59.307 43.478 0.00 0.00 40.16 3.01
4040 6305 3.943381 TCAGGCATTTCAGCAGTATGAAG 59.057 43.478 0.00 0.00 40.16 3.02
4041 6306 3.954200 TCAGGCATTTCAGCAGTATGAA 58.046 40.909 0.00 0.00 39.69 2.57
4042 6307 3.632643 TCAGGCATTTCAGCAGTATGA 57.367 42.857 0.00 0.00 39.69 2.15
4043 6308 4.913335 ATTCAGGCATTTCAGCAGTATG 57.087 40.909 0.00 0.00 40.87 2.39
4044 6309 5.927281 AAATTCAGGCATTTCAGCAGTAT 57.073 34.783 0.00 0.00 35.83 2.12
4047 6312 5.063060 GCTAAAAATTCAGGCATTTCAGCAG 59.937 40.000 8.93 0.00 35.80 4.24
4048 6313 4.931002 GCTAAAAATTCAGGCATTTCAGCA 59.069 37.500 8.93 0.00 35.80 4.41
4049 6314 5.173664 AGCTAAAAATTCAGGCATTTCAGC 58.826 37.500 0.00 0.00 35.88 4.26
4050 6315 7.662604 AAAGCTAAAAATTCAGGCATTTCAG 57.337 32.000 0.00 0.00 0.00 3.02
4051 6316 7.498570 ACAAAAGCTAAAAATTCAGGCATTTCA 59.501 29.630 0.00 0.00 0.00 2.69
4052 6317 7.799914 CACAAAAGCTAAAAATTCAGGCATTTC 59.200 33.333 0.00 0.00 0.00 2.17
4053 6318 7.282901 ACACAAAAGCTAAAAATTCAGGCATTT 59.717 29.630 0.00 0.00 0.00 2.32
4056 6321 5.523188 CACACAAAAGCTAAAAATTCAGGCA 59.477 36.000 0.00 0.00 0.00 4.75
4057 6322 5.523552 ACACACAAAAGCTAAAAATTCAGGC 59.476 36.000 0.00 0.00 0.00 4.85
4058 6323 8.816640 ATACACACAAAAGCTAAAAATTCAGG 57.183 30.769 0.00 0.00 0.00 3.86
4059 6324 8.915654 GGATACACACAAAAGCTAAAAATTCAG 58.084 33.333 0.00 0.00 0.00 3.02
4060 6325 8.417106 TGGATACACACAAAAGCTAAAAATTCA 58.583 29.630 0.00 0.00 46.17 2.57
4101 7138 7.439381 ACATCCATTTCCATCTAATGATTTGC 58.561 34.615 0.00 0.00 35.49 3.68
4133 7170 3.113260 AGCTTAAACAACGTCTGAGCT 57.887 42.857 0.00 0.00 34.43 4.09
4135 7172 3.489785 ACGAAGCTTAAACAACGTCTGAG 59.510 43.478 0.00 0.00 0.00 3.35
4155 7192 0.748005 CTGGGGCCTATGAACCAACG 60.748 60.000 0.84 0.00 31.63 4.10
4164 7201 3.910627 AGAATTCGTATTCTGGGGCCTAT 59.089 43.478 15.53 0.00 46.76 2.57
4258 7300 3.638627 TGTTTTGCCATGTGGACATTACA 59.361 39.130 2.55 5.49 37.39 2.41
4275 7317 9.868277 TCAACAAAGACTTAACATGATTGTTTT 57.132 25.926 0.00 0.00 43.57 2.43
4276 7318 9.520204 CTCAACAAAGACTTAACATGATTGTTT 57.480 29.630 0.00 0.00 43.57 2.83
4278 7320 8.225603 ACTCAACAAAGACTTAACATGATTGT 57.774 30.769 0.00 0.00 37.82 2.71
4279 7321 9.173939 GAACTCAACAAAGACTTAACATGATTG 57.826 33.333 0.00 0.00 0.00 2.67
4280 7322 8.352942 GGAACTCAACAAAGACTTAACATGATT 58.647 33.333 0.00 0.00 0.00 2.57
4281 7323 7.721399 AGGAACTCAACAAAGACTTAACATGAT 59.279 33.333 0.00 0.00 0.00 2.45
4282 7324 7.054124 AGGAACTCAACAAAGACTTAACATGA 58.946 34.615 0.00 0.00 0.00 3.07
4283 7325 7.264373 AGGAACTCAACAAAGACTTAACATG 57.736 36.000 0.00 0.00 0.00 3.21
4284 7326 7.775561 AGAAGGAACTCAACAAAGACTTAACAT 59.224 33.333 0.00 0.00 38.49 2.71
4285 7327 7.110155 AGAAGGAACTCAACAAAGACTTAACA 58.890 34.615 0.00 0.00 38.49 2.41
4286 7328 7.280205 TGAGAAGGAACTCAACAAAGACTTAAC 59.720 37.037 0.00 0.00 42.79 2.01
4287 7329 7.335627 TGAGAAGGAACTCAACAAAGACTTAA 58.664 34.615 0.00 0.00 42.79 1.85
4288 7330 6.884832 TGAGAAGGAACTCAACAAAGACTTA 58.115 36.000 0.00 0.00 42.79 2.24
4289 7331 5.745227 TGAGAAGGAACTCAACAAAGACTT 58.255 37.500 0.00 0.00 42.79 3.01
4290 7332 5.129485 TCTGAGAAGGAACTCAACAAAGACT 59.871 40.000 0.00 0.00 44.62 3.24
4291 7333 5.360591 TCTGAGAAGGAACTCAACAAAGAC 58.639 41.667 0.00 0.00 44.62 3.01
4292 7334 5.614324 TCTGAGAAGGAACTCAACAAAGA 57.386 39.130 0.00 0.00 44.62 2.52
4293 7335 6.874288 AATCTGAGAAGGAACTCAACAAAG 57.126 37.500 0.00 0.00 44.62 2.77
4294 7336 6.828273 TGAAATCTGAGAAGGAACTCAACAAA 59.172 34.615 0.00 0.00 44.62 2.83
4295 7337 6.356556 TGAAATCTGAGAAGGAACTCAACAA 58.643 36.000 0.00 0.00 44.62 2.83
4296 7338 5.928976 TGAAATCTGAGAAGGAACTCAACA 58.071 37.500 0.00 0.00 44.62 3.33
4297 7339 6.226787 TCTGAAATCTGAGAAGGAACTCAAC 58.773 40.000 0.00 0.00 44.62 3.18
4298 7340 6.042552 ACTCTGAAATCTGAGAAGGAACTCAA 59.957 38.462 20.05 0.00 44.62 3.02
4299 7341 5.541868 ACTCTGAAATCTGAGAAGGAACTCA 59.458 40.000 20.05 0.00 42.37 3.41
4300 7342 5.868801 CACTCTGAAATCTGAGAAGGAACTC 59.131 44.000 20.05 0.00 42.37 3.01
4301 7343 5.279910 CCACTCTGAAATCTGAGAAGGAACT 60.280 44.000 20.05 0.00 42.37 3.01
4302 7344 4.934602 CCACTCTGAAATCTGAGAAGGAAC 59.065 45.833 20.05 0.00 42.37 3.62
4303 7345 4.840680 TCCACTCTGAAATCTGAGAAGGAA 59.159 41.667 20.05 10.51 42.37 3.36
4304 7346 4.420206 TCCACTCTGAAATCTGAGAAGGA 58.580 43.478 20.05 20.34 42.37 3.36
4305 7347 4.815533 TCCACTCTGAAATCTGAGAAGG 57.184 45.455 20.05 18.94 42.37 3.46
4306 7348 5.585445 CCAATCCACTCTGAAATCTGAGAAG 59.415 44.000 20.05 12.94 42.37 2.85
4307 7349 5.249163 TCCAATCCACTCTGAAATCTGAGAA 59.751 40.000 20.05 8.50 42.37 2.87
4308 7350 4.779489 TCCAATCCACTCTGAAATCTGAGA 59.221 41.667 20.05 3.14 42.37 3.27
4309 7351 5.095145 TCCAATCCACTCTGAAATCTGAG 57.905 43.478 13.74 13.74 44.40 3.35
4310 7352 5.705397 ATCCAATCCACTCTGAAATCTGA 57.295 39.130 0.00 0.00 0.00 3.27
4311 7353 6.152323 ACAAATCCAATCCACTCTGAAATCTG 59.848 38.462 0.00 0.00 0.00 2.90
4312 7354 6.251471 ACAAATCCAATCCACTCTGAAATCT 58.749 36.000 0.00 0.00 0.00 2.40
4313 7355 6.521151 ACAAATCCAATCCACTCTGAAATC 57.479 37.500 0.00 0.00 0.00 2.17
4314 7356 6.604795 CCTACAAATCCAATCCACTCTGAAAT 59.395 38.462 0.00 0.00 0.00 2.17
4315 7357 5.945784 CCTACAAATCCAATCCACTCTGAAA 59.054 40.000 0.00 0.00 0.00 2.69
4316 7358 5.014123 ACCTACAAATCCAATCCACTCTGAA 59.986 40.000 0.00 0.00 0.00 3.02
4317 7359 4.536090 ACCTACAAATCCAATCCACTCTGA 59.464 41.667 0.00 0.00 0.00 3.27
4318 7360 4.848357 ACCTACAAATCCAATCCACTCTG 58.152 43.478 0.00 0.00 0.00 3.35
4319 7361 4.785376 AGACCTACAAATCCAATCCACTCT 59.215 41.667 0.00 0.00 0.00 3.24
4320 7362 4.878397 CAGACCTACAAATCCAATCCACTC 59.122 45.833 0.00 0.00 0.00 3.51
4321 7363 4.848357 CAGACCTACAAATCCAATCCACT 58.152 43.478 0.00 0.00 0.00 4.00
4322 7364 3.378427 GCAGACCTACAAATCCAATCCAC 59.622 47.826 0.00 0.00 0.00 4.02
4323 7365 3.266772 AGCAGACCTACAAATCCAATCCA 59.733 43.478 0.00 0.00 0.00 3.41
4324 7366 3.891049 AGCAGACCTACAAATCCAATCC 58.109 45.455 0.00 0.00 0.00 3.01
4325 7367 6.543831 ACATTAGCAGACCTACAAATCCAATC 59.456 38.462 0.00 0.00 0.00 2.67
4326 7368 6.426587 ACATTAGCAGACCTACAAATCCAAT 58.573 36.000 0.00 0.00 0.00 3.16
4327 7369 5.815581 ACATTAGCAGACCTACAAATCCAA 58.184 37.500 0.00 0.00 0.00 3.53
4328 7370 5.435686 ACATTAGCAGACCTACAAATCCA 57.564 39.130 0.00 0.00 0.00 3.41
4329 7371 5.449177 GCAACATTAGCAGACCTACAAATCC 60.449 44.000 0.00 0.00 0.00 3.01
4330 7372 5.449177 GGCAACATTAGCAGACCTACAAATC 60.449 44.000 0.00 0.00 0.00 2.17
4331 7373 4.399303 GGCAACATTAGCAGACCTACAAAT 59.601 41.667 0.00 0.00 0.00 2.32
4332 7374 3.756434 GGCAACATTAGCAGACCTACAAA 59.244 43.478 0.00 0.00 0.00 2.83
4333 7375 3.343617 GGCAACATTAGCAGACCTACAA 58.656 45.455 0.00 0.00 0.00 2.41
4334 7376 2.676750 CGGCAACATTAGCAGACCTACA 60.677 50.000 0.00 0.00 0.00 2.74
4335 7377 1.933853 CGGCAACATTAGCAGACCTAC 59.066 52.381 0.00 0.00 0.00 3.18
4336 7378 1.742411 GCGGCAACATTAGCAGACCTA 60.742 52.381 0.00 0.00 0.00 3.08
4337 7379 1.026718 GCGGCAACATTAGCAGACCT 61.027 55.000 0.00 0.00 0.00 3.85
4338 7380 1.429423 GCGGCAACATTAGCAGACC 59.571 57.895 0.00 0.00 0.00 3.85
4339 7381 1.060937 CGCGGCAACATTAGCAGAC 59.939 57.895 0.00 0.00 0.00 3.51
4340 7382 2.749865 GCGCGGCAACATTAGCAGA 61.750 57.895 8.83 0.00 0.00 4.26
4341 7383 2.277501 GCGCGGCAACATTAGCAG 60.278 61.111 8.83 0.00 0.00 4.24
4342 7384 1.092345 TATGCGCGGCAACATTAGCA 61.092 50.000 8.83 5.01 43.62 3.49
4343 7385 0.028770 TTATGCGCGGCAACATTAGC 59.971 50.000 8.83 0.00 43.62 3.09
4344 7386 2.466870 TTTATGCGCGGCAACATTAG 57.533 45.000 8.83 0.00 43.62 1.73
4345 7387 2.616376 AGATTTATGCGCGGCAACATTA 59.384 40.909 8.83 0.00 43.62 1.90
4346 7388 1.405105 AGATTTATGCGCGGCAACATT 59.595 42.857 8.83 0.00 43.62 2.71
4347 7389 1.024271 AGATTTATGCGCGGCAACAT 58.976 45.000 8.83 5.08 43.62 2.71
4348 7390 0.098552 CAGATTTATGCGCGGCAACA 59.901 50.000 8.83 0.00 43.62 3.33
4349 7391 1.202348 GCAGATTTATGCGCGGCAAC 61.202 55.000 8.83 0.00 43.62 4.17
4350 7392 1.063972 GCAGATTTATGCGCGGCAA 59.936 52.632 8.83 0.00 43.62 4.52
4351 7393 2.715005 GCAGATTTATGCGCGGCA 59.285 55.556 8.83 7.01 44.86 5.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.