Multiple sequence alignment - TraesCS7D01G306300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G306300 chr7D 100.000 3671 0 0 1 3671 387493509 387497179 0.000000e+00 6780.0
1 TraesCS7D01G306300 chr7D 97.414 116 2 1 1 115 255419715 255419830 2.890000e-46 196.0
2 TraesCS7D01G306300 chr7D 96.552 116 3 1 1 116 255417176 255417062 1.350000e-44 191.0
3 TraesCS7D01G306300 chr7A 96.083 3115 84 14 207 3310 437608355 437611442 0.000000e+00 5042.0
4 TraesCS7D01G306300 chr7A 94.134 358 20 1 3314 3671 437611759 437612115 8.970000e-151 544.0
5 TraesCS7D01G306300 chr7B 96.507 2176 44 13 580 2751 382519033 382521180 0.000000e+00 3568.0
6 TraesCS7D01G306300 chr7B 91.131 451 36 2 3190 3640 395247544 395247990 3.130000e-170 608.0
7 TraesCS7D01G306300 chr7B 93.384 393 24 2 207 598 382518623 382519014 6.830000e-162 580.0
8 TraesCS7D01G306300 chr7B 95.169 207 10 0 2796 3002 382521180 382521386 9.830000e-86 327.0
9 TraesCS7D01G306300 chr7B 98.039 51 0 1 3006 3055 382521492 382521542 1.820000e-13 87.9
10 TraesCS7D01G306300 chr6D 84.311 1415 212 10 1226 2635 318350671 318349262 0.000000e+00 1375.0
11 TraesCS7D01G306300 chr6A 84.251 1416 211 12 1226 2635 455941935 455940526 0.000000e+00 1369.0
12 TraesCS7D01G306300 chr6B 83.675 1415 221 9 1226 2635 505798621 505800030 0.000000e+00 1325.0
13 TraesCS7D01G306300 chr2D 100.000 107 0 0 1 107 529697448 529697554 8.040000e-47 198.0
14 TraesCS7D01G306300 chr2D 95.690 116 4 1 1 115 71609795 71609680 6.260000e-43 185.0
15 TraesCS7D01G306300 chr3D 99.083 109 1 0 1 109 84656567 84656459 2.890000e-46 196.0
16 TraesCS7D01G306300 chr3D 97.297 111 3 0 1 111 388439033 388438923 4.840000e-44 189.0
17 TraesCS7D01G306300 chr2A 99.057 106 1 0 3 108 391356211 391356316 1.350000e-44 191.0
18 TraesCS7D01G306300 chr1B 97.273 110 3 0 3 112 537326091 537325982 1.740000e-43 187.0
19 TraesCS7D01G306300 chr5B 95.614 114 5 0 3 116 38017479 38017366 2.250000e-42 183.0
20 TraesCS7D01G306300 chr4A 88.525 61 4 3 127 185 497027340 497027399 1.830000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G306300 chr7D 387493509 387497179 3670 False 6780.000 6780 100.00000 1 3671 1 chr7D.!!$F2 3670
1 TraesCS7D01G306300 chr7A 437608355 437612115 3760 False 2793.000 5042 95.10850 207 3671 2 chr7A.!!$F1 3464
2 TraesCS7D01G306300 chr7B 382518623 382521542 2919 False 1140.725 3568 95.77475 207 3055 4 chr7B.!!$F2 2848
3 TraesCS7D01G306300 chr6D 318349262 318350671 1409 True 1375.000 1375 84.31100 1226 2635 1 chr6D.!!$R1 1409
4 TraesCS7D01G306300 chr6A 455940526 455941935 1409 True 1369.000 1369 84.25100 1226 2635 1 chr6A.!!$R1 1409
5 TraesCS7D01G306300 chr6B 505798621 505800030 1409 False 1325.000 1325 83.67500 1226 2635 1 chr6B.!!$F1 1409


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
147 148 0.107945 GAAGATTGCGGCTCCAGAGT 60.108 55.0 0.0 0.0 0.0 3.24 F
177 178 0.320771 AGGGACACATGCACGAAGAC 60.321 55.0 0.0 0.0 0.0 3.01 F
178 179 0.320771 GGGACACATGCACGAAGACT 60.321 55.0 0.0 0.0 0.0 3.24 F
800 842 0.528249 CAGCAGTGCAACCAACCAAC 60.528 55.0 19.2 0.0 37.8 3.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1848 1890 1.003355 CGGGAAGAAGAGCTGCCAA 60.003 57.895 0.00 0.00 45.26 4.52 R
2067 2109 4.598894 CCGATGCGGCTGAGGAGG 62.599 72.222 0.00 0.00 41.17 4.30 R
2414 2456 0.179108 CTGGAAGTAGTACGGGCTGC 60.179 60.000 0.00 0.00 0.00 5.25 R
2929 2977 2.955461 GCCACAGTAGGATCTACTGGGT 60.955 54.545 28.02 13.35 45.02 4.51 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 4.106925 GGCTCTGGTGCCCTCCTG 62.107 72.222 2.60 0.00 46.82 3.86
35 36 3.325753 GCTCTGGTGCCCTCCTGT 61.326 66.667 0.00 0.00 0.00 4.00
36 37 1.990060 GCTCTGGTGCCCTCCTGTA 60.990 63.158 0.00 0.00 0.00 2.74
37 38 1.901085 CTCTGGTGCCCTCCTGTAC 59.099 63.158 0.00 0.00 0.00 2.90
38 39 1.949847 CTCTGGTGCCCTCCTGTACG 61.950 65.000 0.00 0.00 0.00 3.67
39 40 2.203728 TGGTGCCCTCCTGTACGT 60.204 61.111 0.00 0.00 0.00 3.57
40 41 2.264794 GGTGCCCTCCTGTACGTG 59.735 66.667 0.00 0.00 0.00 4.49
41 42 2.434359 GTGCCCTCCTGTACGTGC 60.434 66.667 0.00 0.00 0.00 5.34
42 43 4.063967 TGCCCTCCTGTACGTGCG 62.064 66.667 0.00 0.00 0.00 5.34
44 45 3.760035 CCCTCCTGTACGTGCGCT 61.760 66.667 9.73 0.00 0.00 5.92
45 46 2.507102 CCTCCTGTACGTGCGCTG 60.507 66.667 9.73 3.37 0.00 5.18
46 47 3.181967 CTCCTGTACGTGCGCTGC 61.182 66.667 9.73 0.00 0.00 5.25
60 61 3.452786 CTGCGCGAGGAAGAGGGA 61.453 66.667 12.10 0.00 0.00 4.20
61 62 3.423162 CTGCGCGAGGAAGAGGGAG 62.423 68.421 12.10 0.00 0.00 4.30
62 63 3.141488 GCGCGAGGAAGAGGGAGA 61.141 66.667 12.10 0.00 0.00 3.71
63 64 2.802106 CGCGAGGAAGAGGGAGAC 59.198 66.667 0.00 0.00 0.00 3.36
74 75 4.587189 GGGAGACCGGCCGAATCG 62.587 72.222 30.73 12.89 43.64 3.34
75 76 3.834799 GGAGACCGGCCGAATCGT 61.835 66.667 30.73 16.76 0.00 3.73
76 77 2.183555 GAGACCGGCCGAATCGTT 59.816 61.111 30.73 8.83 0.00 3.85
77 78 1.877165 GAGACCGGCCGAATCGTTC 60.877 63.158 30.73 14.08 0.00 3.95
78 79 2.889018 GACCGGCCGAATCGTTCC 60.889 66.667 30.73 0.48 0.00 3.62
79 80 4.807039 ACCGGCCGAATCGTTCCG 62.807 66.667 30.73 20.95 39.46 4.30
84 85 4.807039 CCGAATCGTTCCGCCGGT 62.807 66.667 1.63 0.00 35.83 5.28
85 86 3.550992 CGAATCGTTCCGCCGGTG 61.551 66.667 8.42 8.42 0.00 4.94
86 87 3.861263 GAATCGTTCCGCCGGTGC 61.861 66.667 10.27 0.00 0.00 5.01
104 105 3.676605 CCCGGCCCCAAACGTTTC 61.677 66.667 11.37 0.00 0.00 2.78
105 106 3.676605 CCGGCCCCAAACGTTTCC 61.677 66.667 11.37 8.47 0.00 3.13
106 107 3.676605 CGGCCCCAAACGTTTCCC 61.677 66.667 11.37 8.33 0.00 3.97
107 108 2.522193 GGCCCCAAACGTTTCCCA 60.522 61.111 11.37 0.00 0.00 4.37
108 109 1.911269 GGCCCCAAACGTTTCCCAT 60.911 57.895 11.37 0.00 0.00 4.00
109 110 1.476845 GGCCCCAAACGTTTCCCATT 61.477 55.000 11.37 0.00 0.00 3.16
110 111 1.258676 GCCCCAAACGTTTCCCATTA 58.741 50.000 11.37 0.00 0.00 1.90
111 112 1.828595 GCCCCAAACGTTTCCCATTAT 59.171 47.619 11.37 0.00 0.00 1.28
112 113 2.235155 GCCCCAAACGTTTCCCATTATT 59.765 45.455 11.37 0.00 0.00 1.40
113 114 3.447944 GCCCCAAACGTTTCCCATTATTA 59.552 43.478 11.37 0.00 0.00 0.98
114 115 4.081586 GCCCCAAACGTTTCCCATTATTAA 60.082 41.667 11.37 0.00 0.00 1.40
115 116 5.569026 GCCCCAAACGTTTCCCATTATTAAA 60.569 40.000 11.37 0.00 0.00 1.52
116 117 6.103330 CCCCAAACGTTTCCCATTATTAAAG 58.897 40.000 11.37 0.00 0.00 1.85
117 118 6.103330 CCCAAACGTTTCCCATTATTAAAGG 58.897 40.000 11.37 4.45 0.00 3.11
118 119 6.103330 CCAAACGTTTCCCATTATTAAAGGG 58.897 40.000 11.37 9.99 44.22 3.95
119 120 6.295405 CCAAACGTTTCCCATTATTAAAGGGT 60.295 38.462 11.37 0.00 43.31 4.34
120 121 6.921486 AACGTTTCCCATTATTAAAGGGTT 57.079 33.333 14.74 1.30 43.31 4.11
121 122 6.519679 ACGTTTCCCATTATTAAAGGGTTC 57.480 37.500 14.74 7.27 43.31 3.62
122 123 6.011481 ACGTTTCCCATTATTAAAGGGTTCA 58.989 36.000 14.74 0.76 43.31 3.18
123 124 6.152154 ACGTTTCCCATTATTAAAGGGTTCAG 59.848 38.462 14.74 9.02 43.31 3.02
124 125 6.338146 GTTTCCCATTATTAAAGGGTTCAGC 58.662 40.000 14.74 2.04 43.31 4.26
125 126 4.204012 TCCCATTATTAAAGGGTTCAGCG 58.796 43.478 14.74 0.00 43.31 5.18
126 127 3.317993 CCCATTATTAAAGGGTTCAGCGG 59.682 47.826 8.33 0.00 34.64 5.52
127 128 3.951680 CCATTATTAAAGGGTTCAGCGGT 59.048 43.478 0.00 0.00 31.72 5.68
128 129 4.202010 CCATTATTAAAGGGTTCAGCGGTG 60.202 45.833 8.67 8.67 31.72 4.94
129 130 2.871096 ATTAAAGGGTTCAGCGGTGA 57.129 45.000 14.39 14.39 0.00 4.02
130 131 2.642154 TTAAAGGGTTCAGCGGTGAA 57.358 45.000 25.16 25.16 40.55 3.18
131 132 2.178912 TAAAGGGTTCAGCGGTGAAG 57.821 50.000 28.94 0.00 43.55 3.02
132 133 0.472471 AAAGGGTTCAGCGGTGAAGA 59.528 50.000 28.94 7.66 43.55 2.87
133 134 0.693049 AAGGGTTCAGCGGTGAAGAT 59.307 50.000 28.94 15.39 43.55 2.40
134 135 0.693049 AGGGTTCAGCGGTGAAGATT 59.307 50.000 28.94 14.65 43.55 2.40
135 136 0.804989 GGGTTCAGCGGTGAAGATTG 59.195 55.000 28.94 0.00 43.55 2.67
136 137 0.169009 GGTTCAGCGGTGAAGATTGC 59.831 55.000 28.94 16.84 43.55 3.56
137 138 0.179215 GTTCAGCGGTGAAGATTGCG 60.179 55.000 28.94 0.00 43.55 4.85
138 139 1.298157 TTCAGCGGTGAAGATTGCGG 61.298 55.000 25.16 0.00 37.79 5.69
139 140 3.127533 AGCGGTGAAGATTGCGGC 61.128 61.111 0.00 0.00 0.00 6.53
140 141 3.127533 GCGGTGAAGATTGCGGCT 61.128 61.111 0.00 0.00 0.00 5.52
141 142 3.093278 CGGTGAAGATTGCGGCTC 58.907 61.111 0.00 0.00 0.00 4.70
142 143 2.464459 CGGTGAAGATTGCGGCTCC 61.464 63.158 0.00 0.00 0.00 4.70
143 144 1.377202 GGTGAAGATTGCGGCTCCA 60.377 57.895 0.00 0.00 0.00 3.86
144 145 1.372087 GGTGAAGATTGCGGCTCCAG 61.372 60.000 0.00 0.00 0.00 3.86
145 146 0.391661 GTGAAGATTGCGGCTCCAGA 60.392 55.000 0.00 0.00 0.00 3.86
146 147 0.107993 TGAAGATTGCGGCTCCAGAG 60.108 55.000 0.00 0.00 0.00 3.35
147 148 0.107945 GAAGATTGCGGCTCCAGAGT 60.108 55.000 0.00 0.00 0.00 3.24
148 149 0.392193 AAGATTGCGGCTCCAGAGTG 60.392 55.000 0.00 0.00 0.00 3.51
149 150 2.437359 ATTGCGGCTCCAGAGTGC 60.437 61.111 0.00 6.97 34.20 4.40
150 151 2.866085 GATTGCGGCTCCAGAGTGCT 62.866 60.000 0.00 0.00 34.53 4.40
151 152 3.889134 TTGCGGCTCCAGAGTGCTG 62.889 63.158 0.00 0.00 40.99 4.41
161 162 2.393271 CAGAGTGCTGGTTCTTAGGG 57.607 55.000 0.00 0.00 38.51 3.53
162 163 1.902508 CAGAGTGCTGGTTCTTAGGGA 59.097 52.381 0.00 0.00 38.51 4.20
163 164 1.903183 AGAGTGCTGGTTCTTAGGGAC 59.097 52.381 0.00 0.00 0.00 4.46
164 165 1.623811 GAGTGCTGGTTCTTAGGGACA 59.376 52.381 0.00 0.00 0.00 4.02
165 166 1.348036 AGTGCTGGTTCTTAGGGACAC 59.652 52.381 0.00 0.00 0.00 3.67
166 167 1.071699 GTGCTGGTTCTTAGGGACACA 59.928 52.381 0.00 0.00 0.00 3.72
167 168 1.985159 TGCTGGTTCTTAGGGACACAT 59.015 47.619 0.00 0.00 0.00 3.21
168 169 2.290260 TGCTGGTTCTTAGGGACACATG 60.290 50.000 0.00 0.00 0.00 3.21
169 170 2.359900 CTGGTTCTTAGGGACACATGC 58.640 52.381 0.00 0.00 0.00 4.06
170 171 1.702401 TGGTTCTTAGGGACACATGCA 59.298 47.619 0.00 0.00 0.00 3.96
171 172 2.084546 GGTTCTTAGGGACACATGCAC 58.915 52.381 0.00 0.00 0.00 4.57
172 173 1.732259 GTTCTTAGGGACACATGCACG 59.268 52.381 0.00 0.00 0.00 5.34
173 174 1.262417 TCTTAGGGACACATGCACGA 58.738 50.000 0.00 0.00 0.00 4.35
174 175 1.621317 TCTTAGGGACACATGCACGAA 59.379 47.619 0.00 0.00 0.00 3.85
175 176 2.002586 CTTAGGGACACATGCACGAAG 58.997 52.381 0.00 0.00 0.00 3.79
176 177 1.262417 TAGGGACACATGCACGAAGA 58.738 50.000 0.00 0.00 0.00 2.87
177 178 0.320771 AGGGACACATGCACGAAGAC 60.321 55.000 0.00 0.00 0.00 3.01
178 179 0.320771 GGGACACATGCACGAAGACT 60.321 55.000 0.00 0.00 0.00 3.24
179 180 1.512926 GGACACATGCACGAAGACTT 58.487 50.000 0.00 0.00 0.00 3.01
180 181 1.873591 GGACACATGCACGAAGACTTT 59.126 47.619 0.00 0.00 0.00 2.66
181 182 2.096218 GGACACATGCACGAAGACTTTC 60.096 50.000 0.00 0.00 0.00 2.62
198 199 9.141400 GAAGACTTTCGACTATATTTGACAAGT 57.859 33.333 0.00 7.20 0.00 3.16
199 200 9.490379 AAGACTTTCGACTATATTTGACAAGTT 57.510 29.630 0.00 0.00 0.00 2.66
200 201 9.141400 AGACTTTCGACTATATTTGACAAGTTC 57.859 33.333 0.00 0.00 0.00 3.01
201 202 8.827177 ACTTTCGACTATATTTGACAAGTTCA 57.173 30.769 0.00 0.00 0.00 3.18
202 203 8.926710 ACTTTCGACTATATTTGACAAGTTCAG 58.073 33.333 0.00 0.00 34.94 3.02
203 204 7.827819 TTCGACTATATTTGACAAGTTCAGG 57.172 36.000 0.00 0.00 34.94 3.86
204 205 6.931838 TCGACTATATTTGACAAGTTCAGGT 58.068 36.000 0.00 0.00 34.94 4.00
205 206 7.033791 TCGACTATATTTGACAAGTTCAGGTC 58.966 38.462 0.00 0.00 34.94 3.85
239 240 5.125578 GGTTCAGGGACCTTGATGTAATTTC 59.874 44.000 7.20 0.00 36.73 2.17
259 260 8.762481 AATTTCCATTATACTTGGGGTACTTC 57.238 34.615 0.00 0.00 34.85 3.01
308 310 8.918202 TTAGATCAGAGCCTCTTTTGTTAAAA 57.082 30.769 0.00 0.00 0.00 1.52
335 337 2.536928 GCATTGGACGATTTGCGAGTAC 60.537 50.000 0.00 0.00 44.57 2.73
377 379 7.715657 TCAGCATTGCCTCGAAAATTAAATAT 58.284 30.769 4.70 0.00 0.00 1.28
409 412 2.853731 AAACCGCAATTGTTTCACGA 57.146 40.000 7.40 0.00 30.34 4.35
410 413 2.113910 AACCGCAATTGTTTCACGAC 57.886 45.000 7.40 0.00 0.00 4.34
411 414 1.018148 ACCGCAATTGTTTCACGACA 58.982 45.000 7.40 0.00 0.00 4.35
435 438 4.582701 AATTTTCAACGTGATCCAAGCA 57.417 36.364 0.00 0.00 0.00 3.91
453 456 5.152097 CAAGCAGTTGATGACTTTGATGTC 58.848 41.667 0.00 0.00 36.10 3.06
478 481 2.401017 TGATTCCGAGCGTATCTTCG 57.599 50.000 0.00 0.00 0.00 3.79
619 659 8.948631 ATCTGTGGTGATACATTTTAGTACTG 57.051 34.615 5.39 0.00 0.00 2.74
620 660 7.903145 TCTGTGGTGATACATTTTAGTACTGT 58.097 34.615 5.39 0.00 0.00 3.55
621 661 9.027202 TCTGTGGTGATACATTTTAGTACTGTA 57.973 33.333 5.39 0.00 0.00 2.74
622 662 9.817809 CTGTGGTGATACATTTTAGTACTGTAT 57.182 33.333 5.39 5.03 38.46 2.29
681 721 1.280421 GGAAGATGGCCACAGTCTCTT 59.720 52.381 16.64 16.64 0.00 2.85
754 796 3.915437 ACGAATTTGATCTTTTGCCGT 57.085 38.095 0.00 0.00 0.00 5.68
799 841 1.674764 CCAGCAGTGCAACCAACCAA 61.675 55.000 19.20 0.00 37.80 3.67
800 842 0.528249 CAGCAGTGCAACCAACCAAC 60.528 55.000 19.20 0.00 37.80 3.77
801 843 1.227234 GCAGTGCAACCAACCAACC 60.227 57.895 11.09 0.00 37.80 3.77
802 844 1.954362 GCAGTGCAACCAACCAACCA 61.954 55.000 11.09 0.00 37.80 3.67
936 978 0.836400 TCTCGTTCCTTCCCCTGCTT 60.836 55.000 0.00 0.00 0.00 3.91
938 980 1.377333 CGTTCCTTCCCCTGCTTCC 60.377 63.158 0.00 0.00 0.00 3.46
939 981 1.377333 GTTCCTTCCCCTGCTTCCG 60.377 63.158 0.00 0.00 0.00 4.30
940 982 3.268103 TTCCTTCCCCTGCTTCCGC 62.268 63.158 0.00 0.00 0.00 5.54
942 984 2.352805 CTTCCCCTGCTTCCGCTT 59.647 61.111 0.00 0.00 36.97 4.68
943 985 1.746991 CTTCCCCTGCTTCCGCTTC 60.747 63.158 0.00 0.00 36.97 3.86
944 986 3.268103 TTCCCCTGCTTCCGCTTCC 62.268 63.158 0.00 0.00 36.97 3.46
1731 1773 1.361668 GCATCCGCAAGCTCGAGAAA 61.362 55.000 18.75 0.00 38.36 2.52
1911 1953 1.449601 GTCGACGGTGGCCATCAAT 60.450 57.895 18.15 2.45 0.00 2.57
2115 2157 1.604378 CAGGGTCCTCGCCATCTTT 59.396 57.895 0.00 0.00 0.00 2.52
2672 2714 5.536916 GTGCCACTTCATACTCCTACTAGAT 59.463 44.000 0.00 0.00 0.00 1.98
2929 2977 5.638657 ACGGTAGTATTTGTGCGTGAATTTA 59.361 36.000 0.00 0.00 0.00 1.40
2950 2998 1.689273 CCCAGTAGATCCTACTGTGGC 59.311 57.143 24.21 0.00 42.37 5.01
3060 3211 4.270808 CAGGCCTCATTTGTTTGTTTGTTC 59.729 41.667 0.00 0.00 0.00 3.18
3084 3235 8.970691 TCTACTGTAAAACCGTAGAACAATAC 57.029 34.615 8.36 0.00 40.39 1.89
3215 3366 7.886629 TGTTATGTTCTACCTAACTACGGAT 57.113 36.000 0.00 0.00 32.65 4.18
3259 3410 3.578282 TGCCTTGATCTGAGTAGTTCACA 59.422 43.478 0.00 0.00 33.53 3.58
3260 3411 4.223700 TGCCTTGATCTGAGTAGTTCACAT 59.776 41.667 0.00 0.00 33.53 3.21
3282 3433 7.917505 CACATTCCTTCCTGTAAATAATGCTTC 59.082 37.037 0.00 0.00 0.00 3.86
3310 3461 2.290197 TGAATGTGTGGTGCAGCTGATA 60.290 45.455 20.43 1.74 0.00 2.15
3312 3463 1.741528 TGTGTGGTGCAGCTGATATG 58.258 50.000 20.43 0.00 0.00 1.78
3370 3834 4.002982 GCATCACACTGTTAGAATGTCCA 58.997 43.478 0.00 0.00 0.00 4.02
3385 3849 6.802608 AGAATGTCCAATGCAATATCTTGTG 58.197 36.000 0.00 0.00 34.69 3.33
3397 3861 5.123820 GCAATATCTTGTGGCAGTTGAAGTA 59.876 40.000 0.00 0.00 34.69 2.24
3407 3871 1.808945 CAGTTGAAGTAGGGCAAGCTG 59.191 52.381 0.00 0.00 0.00 4.24
3413 3877 2.134789 AGTAGGGCAAGCTGGAATTG 57.865 50.000 0.00 0.00 0.00 2.32
3416 3880 3.459598 AGTAGGGCAAGCTGGAATTGATA 59.540 43.478 0.00 0.00 0.00 2.15
3423 3887 7.071572 AGGGCAAGCTGGAATTGATAAAATATT 59.928 33.333 0.00 0.00 0.00 1.28
3511 3975 5.872070 CAGAAGAGATGTAGAAGTGTTTCCC 59.128 44.000 0.00 0.00 33.64 3.97
3516 3980 3.485463 TGTAGAAGTGTTTCCCCTGTG 57.515 47.619 0.00 0.00 33.64 3.66
3523 3987 5.546499 AGAAGTGTTTCCCCTGTGTTATCTA 59.454 40.000 0.00 0.00 33.64 1.98
3542 4006 9.093970 GTTATCTACACACAATGCACAGTTATA 57.906 33.333 0.00 0.00 0.00 0.98
3567 4031 1.171308 CCAGGTGCATGGTCTTTCTG 58.829 55.000 0.00 0.00 35.47 3.02
3575 4039 3.817084 TGCATGGTCTTTCTGTTGAGAAG 59.183 43.478 0.00 0.00 39.44 2.85
3609 4073 2.928036 TCCTGTCATGGAGAAGGAGA 57.072 50.000 0.00 0.00 32.30 3.71
3614 4078 3.095332 TGTCATGGAGAAGGAGACAGAG 58.905 50.000 0.00 0.00 34.59 3.35
3615 4079 2.430332 GTCATGGAGAAGGAGACAGAGG 59.570 54.545 0.00 0.00 0.00 3.69
3616 4080 1.761784 CATGGAGAAGGAGACAGAGGG 59.238 57.143 0.00 0.00 0.00 4.30
3635 4099 2.172293 GGGAGATCTTGTGCCTCAATCT 59.828 50.000 0.00 0.00 35.35 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 2.434359 GCACGTACAGGAGGGCAC 60.434 66.667 0.00 0.00 0.00 5.01
25 26 4.063967 CGCACGTACAGGAGGGCA 62.064 66.667 0.00 0.00 0.00 5.36
27 28 3.760035 AGCGCACGTACAGGAGGG 61.760 66.667 11.47 0.00 0.00 4.30
28 29 2.507102 CAGCGCACGTACAGGAGG 60.507 66.667 11.47 0.00 0.00 4.30
29 30 3.181967 GCAGCGCACGTACAGGAG 61.182 66.667 11.47 0.00 0.00 3.69
43 44 3.423162 CTCCCTCTTCCTCGCGCAG 62.423 68.421 8.75 3.84 0.00 5.18
44 45 3.452786 CTCCCTCTTCCTCGCGCA 61.453 66.667 8.75 0.00 0.00 6.09
45 46 3.141488 TCTCCCTCTTCCTCGCGC 61.141 66.667 0.00 0.00 0.00 6.86
46 47 2.776913 GGTCTCCCTCTTCCTCGCG 61.777 68.421 0.00 0.00 0.00 5.87
47 48 2.776913 CGGTCTCCCTCTTCCTCGC 61.777 68.421 0.00 0.00 0.00 5.03
48 49 2.122167 CCGGTCTCCCTCTTCCTCG 61.122 68.421 0.00 0.00 0.00 4.63
49 50 2.428085 GCCGGTCTCCCTCTTCCTC 61.428 68.421 1.90 0.00 0.00 3.71
50 51 2.364448 GCCGGTCTCCCTCTTCCT 60.364 66.667 1.90 0.00 0.00 3.36
51 52 3.471806 GGCCGGTCTCCCTCTTCC 61.472 72.222 1.90 0.00 0.00 3.46
52 53 3.839432 CGGCCGGTCTCCCTCTTC 61.839 72.222 20.10 0.00 0.00 2.87
53 54 3.899545 TTCGGCCGGTCTCCCTCTT 62.900 63.158 27.83 0.00 0.00 2.85
54 55 3.680920 ATTCGGCCGGTCTCCCTCT 62.681 63.158 27.83 0.00 0.00 3.69
55 56 3.153270 GATTCGGCCGGTCTCCCTC 62.153 68.421 27.83 7.92 0.00 4.30
56 57 3.155167 GATTCGGCCGGTCTCCCT 61.155 66.667 27.83 1.75 0.00 4.20
57 58 4.587189 CGATTCGGCCGGTCTCCC 62.587 72.222 27.83 7.99 0.00 4.30
58 59 3.366739 AACGATTCGGCCGGTCTCC 62.367 63.158 27.83 9.47 0.00 3.71
59 60 1.877165 GAACGATTCGGCCGGTCTC 60.877 63.158 27.83 17.86 40.30 3.36
60 61 2.183555 GAACGATTCGGCCGGTCT 59.816 61.111 27.83 10.31 40.30 3.85
61 62 2.889018 GGAACGATTCGGCCGGTC 60.889 66.667 27.83 21.93 42.50 4.79
87 88 3.676605 GAAACGTTTGGGGCCGGG 61.677 66.667 20.10 0.00 0.00 5.73
88 89 3.676605 GGAAACGTTTGGGGCCGG 61.677 66.667 20.10 0.00 0.00 6.13
89 90 3.676605 GGGAAACGTTTGGGGCCG 61.677 66.667 20.10 0.00 0.00 6.13
90 91 1.476845 AATGGGAAACGTTTGGGGCC 61.477 55.000 20.10 12.96 0.00 5.80
91 92 1.258676 TAATGGGAAACGTTTGGGGC 58.741 50.000 20.10 3.37 0.00 5.80
92 93 5.662674 TTAATAATGGGAAACGTTTGGGG 57.337 39.130 20.10 0.00 0.00 4.96
93 94 6.103330 CCTTTAATAATGGGAAACGTTTGGG 58.897 40.000 20.10 0.00 0.00 4.12
94 95 6.103330 CCCTTTAATAATGGGAAACGTTTGG 58.897 40.000 20.10 8.17 46.23 3.28
95 96 6.693466 ACCCTTTAATAATGGGAAACGTTTG 58.307 36.000 25.30 0.18 46.23 2.93
96 97 6.921486 ACCCTTTAATAATGGGAAACGTTT 57.079 33.333 25.30 14.57 46.23 3.60
97 98 6.494146 TGAACCCTTTAATAATGGGAAACGTT 59.506 34.615 25.30 12.05 46.23 3.99
98 99 6.011481 TGAACCCTTTAATAATGGGAAACGT 58.989 36.000 25.30 4.93 46.23 3.99
99 100 6.518208 TGAACCCTTTAATAATGGGAAACG 57.482 37.500 25.30 4.34 46.23 3.60
100 101 6.338146 GCTGAACCCTTTAATAATGGGAAAC 58.662 40.000 25.30 16.65 46.23 2.78
101 102 5.126384 CGCTGAACCCTTTAATAATGGGAAA 59.874 40.000 25.30 12.09 46.23 3.13
102 103 4.642885 CGCTGAACCCTTTAATAATGGGAA 59.357 41.667 25.30 12.36 46.23 3.97
103 104 4.204012 CGCTGAACCCTTTAATAATGGGA 58.796 43.478 25.30 7.18 46.23 4.37
105 106 3.951680 ACCGCTGAACCCTTTAATAATGG 59.048 43.478 0.00 0.00 0.00 3.16
106 107 4.638421 TCACCGCTGAACCCTTTAATAATG 59.362 41.667 0.00 0.00 0.00 1.90
107 108 4.850680 TCACCGCTGAACCCTTTAATAAT 58.149 39.130 0.00 0.00 0.00 1.28
108 109 4.289238 TCACCGCTGAACCCTTTAATAA 57.711 40.909 0.00 0.00 0.00 1.40
109 110 3.985019 TCACCGCTGAACCCTTTAATA 57.015 42.857 0.00 0.00 0.00 0.98
110 111 2.871096 TCACCGCTGAACCCTTTAAT 57.129 45.000 0.00 0.00 0.00 1.40
111 112 2.105134 TCTTCACCGCTGAACCCTTTAA 59.895 45.455 0.00 0.00 32.68 1.52
112 113 1.695242 TCTTCACCGCTGAACCCTTTA 59.305 47.619 0.00 0.00 32.68 1.85
113 114 0.472471 TCTTCACCGCTGAACCCTTT 59.528 50.000 0.00 0.00 32.68 3.11
114 115 0.693049 ATCTTCACCGCTGAACCCTT 59.307 50.000 0.00 0.00 32.68 3.95
115 116 0.693049 AATCTTCACCGCTGAACCCT 59.307 50.000 0.00 0.00 32.68 4.34
116 117 0.804989 CAATCTTCACCGCTGAACCC 59.195 55.000 0.00 0.00 32.68 4.11
117 118 0.169009 GCAATCTTCACCGCTGAACC 59.831 55.000 0.00 0.00 32.68 3.62
118 119 0.179215 CGCAATCTTCACCGCTGAAC 60.179 55.000 0.00 0.00 32.68 3.18
119 120 1.298157 CCGCAATCTTCACCGCTGAA 61.298 55.000 0.00 0.00 35.04 3.02
120 121 1.741401 CCGCAATCTTCACCGCTGA 60.741 57.895 0.00 0.00 0.00 4.26
121 122 2.787249 CCGCAATCTTCACCGCTG 59.213 61.111 0.00 0.00 0.00 5.18
122 123 3.127533 GCCGCAATCTTCACCGCT 61.128 61.111 0.00 0.00 0.00 5.52
123 124 3.100862 GAGCCGCAATCTTCACCGC 62.101 63.158 0.00 0.00 0.00 5.68
124 125 2.464459 GGAGCCGCAATCTTCACCG 61.464 63.158 0.00 0.00 0.00 4.94
125 126 1.372087 CTGGAGCCGCAATCTTCACC 61.372 60.000 0.00 0.00 0.00 4.02
126 127 0.391661 TCTGGAGCCGCAATCTTCAC 60.392 55.000 0.00 0.00 0.00 3.18
127 128 0.107993 CTCTGGAGCCGCAATCTTCA 60.108 55.000 0.00 0.00 0.00 3.02
128 129 0.107945 ACTCTGGAGCCGCAATCTTC 60.108 55.000 0.00 0.00 0.00 2.87
129 130 0.392193 CACTCTGGAGCCGCAATCTT 60.392 55.000 0.00 0.00 0.00 2.40
130 131 1.220206 CACTCTGGAGCCGCAATCT 59.780 57.895 0.00 0.00 0.00 2.40
131 132 2.467826 GCACTCTGGAGCCGCAATC 61.468 63.158 7.46 0.00 32.33 2.67
132 133 2.437359 GCACTCTGGAGCCGCAAT 60.437 61.111 7.46 0.00 32.33 3.56
133 134 3.630013 AGCACTCTGGAGCCGCAA 61.630 61.111 12.81 0.00 33.90 4.85
134 135 4.383861 CAGCACTCTGGAGCCGCA 62.384 66.667 12.81 0.00 36.68 5.69
142 143 1.902508 TCCCTAAGAACCAGCACTCTG 59.097 52.381 0.00 0.00 40.02 3.35
143 144 1.903183 GTCCCTAAGAACCAGCACTCT 59.097 52.381 0.00 0.00 0.00 3.24
144 145 1.623811 TGTCCCTAAGAACCAGCACTC 59.376 52.381 0.00 0.00 0.00 3.51
145 146 1.348036 GTGTCCCTAAGAACCAGCACT 59.652 52.381 0.00 0.00 0.00 4.40
146 147 1.071699 TGTGTCCCTAAGAACCAGCAC 59.928 52.381 0.00 0.00 0.00 4.40
147 148 1.429930 TGTGTCCCTAAGAACCAGCA 58.570 50.000 0.00 0.00 0.00 4.41
148 149 2.359900 CATGTGTCCCTAAGAACCAGC 58.640 52.381 0.00 0.00 0.00 4.85
149 150 2.290260 TGCATGTGTCCCTAAGAACCAG 60.290 50.000 0.00 0.00 0.00 4.00
150 151 1.702401 TGCATGTGTCCCTAAGAACCA 59.298 47.619 0.00 0.00 0.00 3.67
151 152 2.084546 GTGCATGTGTCCCTAAGAACC 58.915 52.381 0.00 0.00 0.00 3.62
152 153 1.732259 CGTGCATGTGTCCCTAAGAAC 59.268 52.381 0.00 0.00 0.00 3.01
153 154 1.621317 TCGTGCATGTGTCCCTAAGAA 59.379 47.619 5.68 0.00 0.00 2.52
154 155 1.262417 TCGTGCATGTGTCCCTAAGA 58.738 50.000 5.68 0.00 0.00 2.10
155 156 2.002586 CTTCGTGCATGTGTCCCTAAG 58.997 52.381 5.68 0.00 0.00 2.18
156 157 1.621317 TCTTCGTGCATGTGTCCCTAA 59.379 47.619 5.68 0.00 0.00 2.69
157 158 1.067142 GTCTTCGTGCATGTGTCCCTA 60.067 52.381 5.68 0.00 0.00 3.53
158 159 0.320771 GTCTTCGTGCATGTGTCCCT 60.321 55.000 5.68 0.00 0.00 4.20
159 160 0.320771 AGTCTTCGTGCATGTGTCCC 60.321 55.000 5.68 0.00 0.00 4.46
160 161 1.512926 AAGTCTTCGTGCATGTGTCC 58.487 50.000 5.68 0.00 0.00 4.02
161 162 3.174799 GAAAGTCTTCGTGCATGTGTC 57.825 47.619 5.68 0.00 0.00 3.67
172 173 9.141400 ACTTGTCAAATATAGTCGAAAGTCTTC 57.859 33.333 0.00 0.00 0.00 2.87
173 174 9.490379 AACTTGTCAAATATAGTCGAAAGTCTT 57.510 29.630 0.00 0.00 0.00 3.01
174 175 9.141400 GAACTTGTCAAATATAGTCGAAAGTCT 57.859 33.333 0.00 0.00 0.00 3.24
175 176 8.922676 TGAACTTGTCAAATATAGTCGAAAGTC 58.077 33.333 0.00 0.00 31.51 3.01
176 177 8.827177 TGAACTTGTCAAATATAGTCGAAAGT 57.173 30.769 0.00 0.00 31.51 2.66
177 178 8.383619 CCTGAACTTGTCAAATATAGTCGAAAG 58.616 37.037 0.00 0.00 35.22 2.62
178 179 7.876068 ACCTGAACTTGTCAAATATAGTCGAAA 59.124 33.333 0.00 0.00 35.22 3.46
179 180 7.383687 ACCTGAACTTGTCAAATATAGTCGAA 58.616 34.615 0.00 0.00 35.22 3.71
180 181 6.931838 ACCTGAACTTGTCAAATATAGTCGA 58.068 36.000 0.00 0.00 35.22 4.20
181 182 7.036220 AGACCTGAACTTGTCAAATATAGTCG 58.964 38.462 0.00 0.00 35.22 4.18
182 183 8.660373 CAAGACCTGAACTTGTCAAATATAGTC 58.340 37.037 0.00 0.00 39.57 2.59
183 184 8.553459 CAAGACCTGAACTTGTCAAATATAGT 57.447 34.615 0.00 0.00 39.57 2.12
194 195 3.313526 CCACTGAACAAGACCTGAACTTG 59.686 47.826 0.00 0.00 46.69 3.16
195 196 3.054361 ACCACTGAACAAGACCTGAACTT 60.054 43.478 0.00 0.00 0.00 2.66
196 197 2.505819 ACCACTGAACAAGACCTGAACT 59.494 45.455 0.00 0.00 0.00 3.01
197 198 2.919228 ACCACTGAACAAGACCTGAAC 58.081 47.619 0.00 0.00 0.00 3.18
198 199 3.054728 TGAACCACTGAACAAGACCTGAA 60.055 43.478 0.00 0.00 0.00 3.02
199 200 2.503765 TGAACCACTGAACAAGACCTGA 59.496 45.455 0.00 0.00 0.00 3.86
200 201 2.874701 CTGAACCACTGAACAAGACCTG 59.125 50.000 0.00 0.00 0.00 4.00
201 202 2.158755 CCTGAACCACTGAACAAGACCT 60.159 50.000 0.00 0.00 0.00 3.85
202 203 2.222027 CCTGAACCACTGAACAAGACC 58.778 52.381 0.00 0.00 0.00 3.85
203 204 2.158813 TCCCTGAACCACTGAACAAGAC 60.159 50.000 0.00 0.00 0.00 3.01
204 205 2.123589 TCCCTGAACCACTGAACAAGA 58.876 47.619 0.00 0.00 0.00 3.02
205 206 2.222027 GTCCCTGAACCACTGAACAAG 58.778 52.381 0.00 0.00 0.00 3.16
239 240 5.286267 ACGAAGTACCCCAAGTATAATGG 57.714 43.478 0.00 0.00 41.94 3.16
285 286 7.823745 TTTTTAACAAAAGAGGCTCTGATCT 57.176 32.000 19.53 0.00 0.00 2.75
308 310 3.066380 GCAAATCGTCCAATGCCTTTTT 58.934 40.909 0.00 0.00 32.73 1.94
313 315 0.248215 CTCGCAAATCGTCCAATGCC 60.248 55.000 0.00 0.00 39.67 4.40
319 321 3.673809 GGATATGTACTCGCAAATCGTCC 59.326 47.826 0.00 0.00 39.67 4.79
377 379 4.920640 TTGCGGTTTTCTAATTTGACCA 57.079 36.364 0.00 0.00 0.00 4.02
409 412 5.255710 TGGATCACGTTGAAAATTTGTGT 57.744 34.783 0.00 0.00 31.22 3.72
410 413 5.332506 GCTTGGATCACGTTGAAAATTTGTG 60.333 40.000 0.00 0.00 0.00 3.33
411 414 4.744631 GCTTGGATCACGTTGAAAATTTGT 59.255 37.500 0.00 0.00 0.00 2.83
453 456 2.331809 TACGCTCGGAATCATCGATG 57.668 50.000 19.61 19.61 36.01 3.84
478 481 2.894387 GCGCTCTGCTCCATCCAC 60.894 66.667 0.00 0.00 41.73 4.02
799 841 2.943978 CGAGGAGCCGAAACCTGGT 61.944 63.158 0.00 0.00 36.57 4.00
800 842 2.125512 CGAGGAGCCGAAACCTGG 60.126 66.667 0.00 0.00 36.57 4.45
801 843 2.125512 CCGAGGAGCCGAAACCTG 60.126 66.667 0.00 0.00 36.57 4.00
802 844 2.283676 TCCGAGGAGCCGAAACCT 60.284 61.111 0.00 0.00 39.41 3.50
1800 1842 2.731571 CGAGAGGATGGGCCCGAAA 61.732 63.158 19.37 0.00 37.37 3.46
1848 1890 1.003355 CGGGAAGAAGAGCTGCCAA 60.003 57.895 0.00 0.00 45.26 4.52
2067 2109 4.598894 CCGATGCGGCTGAGGAGG 62.599 72.222 0.00 0.00 41.17 4.30
2414 2456 0.179108 CTGGAAGTAGTACGGGCTGC 60.179 60.000 0.00 0.00 0.00 5.25
2672 2714 5.042463 TGTAGTGTCATTCTGAAACCCAA 57.958 39.130 0.00 0.00 35.19 4.12
2717 2759 8.290325 GCACTTTCTTGTTTGCTTATTAGTAGT 58.710 33.333 0.00 0.00 32.00 2.73
2718 2760 7.750903 GGCACTTTCTTGTTTGCTTATTAGTAG 59.249 37.037 0.00 0.00 35.24 2.57
2719 2761 7.447238 AGGCACTTTCTTGTTTGCTTATTAGTA 59.553 33.333 0.00 0.00 27.25 1.82
2777 2825 8.465999 CCACTGTTTGGCTGATTAATAAATGTA 58.534 33.333 0.00 0.00 39.07 2.29
2906 2954 4.593597 AATTCACGCACAAATACTACCG 57.406 40.909 0.00 0.00 0.00 4.02
2929 2977 2.955461 GCCACAGTAGGATCTACTGGGT 60.955 54.545 28.02 13.35 45.02 4.51
2950 2998 3.829886 AAAATACATGCAGTCCACACG 57.170 42.857 0.00 0.00 0.00 4.49
3060 3211 8.976986 AGTATTGTTCTACGGTTTTACAGTAG 57.023 34.615 9.82 9.82 44.58 2.57
3195 3346 7.657023 AAAGATCCGTAGTTAGGTAGAACAT 57.343 36.000 0.00 0.00 0.00 2.71
3199 3350 6.888632 ACAGAAAAGATCCGTAGTTAGGTAGA 59.111 38.462 0.00 0.00 0.00 2.59
3212 3363 4.051237 GCACACCAAAACAGAAAAGATCC 58.949 43.478 0.00 0.00 0.00 3.36
3215 3366 4.799564 AAGCACACCAAAACAGAAAAGA 57.200 36.364 0.00 0.00 0.00 2.52
3259 3410 7.125391 TGGAAGCATTATTTACAGGAAGGAAT 58.875 34.615 0.00 0.00 0.00 3.01
3260 3411 6.489603 TGGAAGCATTATTTACAGGAAGGAA 58.510 36.000 0.00 0.00 0.00 3.36
3282 3433 0.528924 CACCACACATTCATGGCTGG 59.471 55.000 0.00 4.25 39.84 4.85
3310 3461 5.297776 CCATAAGAAACGGCAAGATCTTCAT 59.702 40.000 4.57 0.00 33.81 2.57
3312 3463 4.876107 TCCATAAGAAACGGCAAGATCTTC 59.124 41.667 4.57 0.75 33.81 2.87
3370 3834 4.463539 TCAACTGCCACAAGATATTGCATT 59.536 37.500 0.00 0.00 0.00 3.56
3385 3849 1.168714 CTTGCCCTACTTCAACTGCC 58.831 55.000 0.00 0.00 0.00 4.85
3397 3861 3.386932 TTATCAATTCCAGCTTGCCCT 57.613 42.857 0.00 0.00 0.00 5.19
3416 3880 8.995027 TTGGCACAGAGGTATATCAATATTTT 57.005 30.769 0.00 0.00 42.39 1.82
3423 3887 5.104151 TCCATTTTGGCACAGAGGTATATCA 60.104 40.000 0.00 0.00 42.39 2.15
3440 3904 4.322953 GCTGGGACAACATCATTCCATTTT 60.323 41.667 0.00 0.00 38.70 1.82
3516 3980 5.862924 ACTGTGCATTGTGTGTAGATAAC 57.137 39.130 0.00 0.00 0.00 1.89
3523 3987 7.065803 GGATAACTATAACTGTGCATTGTGTGT 59.934 37.037 0.00 0.00 0.00 3.72
3542 4006 2.200081 AGACCATGCACCTGGATAACT 58.800 47.619 13.35 4.35 39.73 2.24
3567 4031 9.118300 AGGATCAATACAATGAATCTTCTCAAC 57.882 33.333 0.00 0.00 32.06 3.18
3575 4039 7.446319 TCCATGACAGGATCAATACAATGAATC 59.554 37.037 0.00 0.00 41.93 2.52
3609 4073 0.908198 GGCACAAGATCTCCCTCTGT 59.092 55.000 0.00 0.00 0.00 3.41
3614 4078 2.172293 AGATTGAGGCACAAGATCTCCC 59.828 50.000 3.33 0.00 42.02 4.30
3615 4079 3.204526 CAGATTGAGGCACAAGATCTCC 58.795 50.000 3.33 0.00 42.02 3.71
3616 4080 2.613133 GCAGATTGAGGCACAAGATCTC 59.387 50.000 3.33 0.00 42.02 2.75
3635 4099 7.884257 TCAATACATCTGAAAAACATCTTGCA 58.116 30.769 0.00 0.00 0.00 4.08
3648 4112 5.241403 ACCACCACTTTCAATACATCTGA 57.759 39.130 0.00 0.00 0.00 3.27



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.