Multiple sequence alignment - TraesCS7D01G306300
Loading Multiple Alignment...
BLAST Results
BLAST Results - Input Sequence
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this
to extract flanking regions for cloning. If the result of the multiple sequence alignment is
not as expected, these results could be used for further investigation.
qseqid
sseqid
percentage.identical
alignment.length
no.mismatch
no.gap.openings
qstart
qend
sstart
send
evalue
bitscore
0
TraesCS7D01G306300
chr7D
100.000
3671
0
0
1
3671
387493509
387497179
0.000000e+00
6780.0
1
TraesCS7D01G306300
chr7D
97.414
116
2
1
1
115
255419715
255419830
2.890000e-46
196.0
2
TraesCS7D01G306300
chr7D
96.552
116
3
1
1
116
255417176
255417062
1.350000e-44
191.0
3
TraesCS7D01G306300
chr7A
96.083
3115
84
14
207
3310
437608355
437611442
0.000000e+00
5042.0
4
TraesCS7D01G306300
chr7A
94.134
358
20
1
3314
3671
437611759
437612115
8.970000e-151
544.0
5
TraesCS7D01G306300
chr7B
96.507
2176
44
13
580
2751
382519033
382521180
0.000000e+00
3568.0
6
TraesCS7D01G306300
chr7B
91.131
451
36
2
3190
3640
395247544
395247990
3.130000e-170
608.0
7
TraesCS7D01G306300
chr7B
93.384
393
24
2
207
598
382518623
382519014
6.830000e-162
580.0
8
TraesCS7D01G306300
chr7B
95.169
207
10
0
2796
3002
382521180
382521386
9.830000e-86
327.0
9
TraesCS7D01G306300
chr7B
98.039
51
0
1
3006
3055
382521492
382521542
1.820000e-13
87.9
10
TraesCS7D01G306300
chr6D
84.311
1415
212
10
1226
2635
318350671
318349262
0.000000e+00
1375.0
11
TraesCS7D01G306300
chr6A
84.251
1416
211
12
1226
2635
455941935
455940526
0.000000e+00
1369.0
12
TraesCS7D01G306300
chr6B
83.675
1415
221
9
1226
2635
505798621
505800030
0.000000e+00
1325.0
13
TraesCS7D01G306300
chr2D
100.000
107
0
0
1
107
529697448
529697554
8.040000e-47
198.0
14
TraesCS7D01G306300
chr2D
95.690
116
4
1
1
115
71609795
71609680
6.260000e-43
185.0
15
TraesCS7D01G306300
chr3D
99.083
109
1
0
1
109
84656567
84656459
2.890000e-46
196.0
16
TraesCS7D01G306300
chr3D
97.297
111
3
0
1
111
388439033
388438923
4.840000e-44
189.0
17
TraesCS7D01G306300
chr2A
99.057
106
1
0
3
108
391356211
391356316
1.350000e-44
191.0
18
TraesCS7D01G306300
chr1B
97.273
110
3
0
3
112
537326091
537325982
1.740000e-43
187.0
19
TraesCS7D01G306300
chr5B
95.614
114
5
0
3
116
38017479
38017366
2.250000e-42
183.0
20
TraesCS7D01G306300
chr4A
88.525
61
4
3
127
185
497027340
497027399
1.830000e-08
71.3
BLAST Results - HSPs grouped
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the
BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are
purely upstream or downstream may be removed if they don't overlap both primers.
query
scaffold
start
end
length
rev.comp
avg.bitscore
max.bitscore
avg.percent.identical
query.start
query.end
num_hsp
groupid
homo_length
0
TraesCS7D01G306300
chr7D
387493509
387497179
3670
False
6780.000
6780
100.00000
1
3671
1
chr7D.!!$F2
3670
1
TraesCS7D01G306300
chr7A
437608355
437612115
3760
False
2793.000
5042
95.10850
207
3671
2
chr7A.!!$F1
3464
2
TraesCS7D01G306300
chr7B
382518623
382521542
2919
False
1140.725
3568
95.77475
207
3055
4
chr7B.!!$F2
2848
3
TraesCS7D01G306300
chr6D
318349262
318350671
1409
True
1375.000
1375
84.31100
1226
2635
1
chr6D.!!$R1
1409
4
TraesCS7D01G306300
chr6A
455940526
455941935
1409
True
1369.000
1369
84.25100
1226
2635
1
chr6A.!!$R1
1409
5
TraesCS7D01G306300
chr6B
505798621
505800030
1409
False
1325.000
1325
83.67500
1226
2635
1
chr6B.!!$F1
1409
AutoCloner calculated primer pairs
These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3),
whilst remaining within the specified product range where possible.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
147
148
0.107945
GAAGATTGCGGCTCCAGAGT
60.108
55.0
0.0
0.0
0.0
3.24
F
177
178
0.320771
AGGGACACATGCACGAAGAC
60.321
55.0
0.0
0.0
0.0
3.01
F
178
179
0.320771
GGGACACATGCACGAAGACT
60.321
55.0
0.0
0.0
0.0
3.24
F
800
842
0.528249
CAGCAGTGCAACCAACCAAC
60.528
55.0
19.2
0.0
37.8
3.77
F
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
1848
1890
1.003355
CGGGAAGAAGAGCTGCCAA
60.003
57.895
0.00
0.00
45.26
4.52
R
2067
2109
4.598894
CCGATGCGGCTGAGGAGG
62.599
72.222
0.00
0.00
41.17
4.30
R
2414
2456
0.179108
CTGGAAGTAGTACGGGCTGC
60.179
60.000
0.00
0.00
0.00
5.25
R
2929
2977
2.955461
GCCACAGTAGGATCTACTGGGT
60.955
54.545
28.02
13.35
45.02
4.51
R
All possible primers
Listed here are all possible primers based on the multiple sequence alignment and SNPs generated
previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work
during PCR or sequencing,
these could be used as alternatives.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
34
35
4.106925
GGCTCTGGTGCCCTCCTG
62.107
72.222
2.60
0.00
46.82
3.86
35
36
3.325753
GCTCTGGTGCCCTCCTGT
61.326
66.667
0.00
0.00
0.00
4.00
36
37
1.990060
GCTCTGGTGCCCTCCTGTA
60.990
63.158
0.00
0.00
0.00
2.74
37
38
1.901085
CTCTGGTGCCCTCCTGTAC
59.099
63.158
0.00
0.00
0.00
2.90
38
39
1.949847
CTCTGGTGCCCTCCTGTACG
61.950
65.000
0.00
0.00
0.00
3.67
39
40
2.203728
TGGTGCCCTCCTGTACGT
60.204
61.111
0.00
0.00
0.00
3.57
40
41
2.264794
GGTGCCCTCCTGTACGTG
59.735
66.667
0.00
0.00
0.00
4.49
41
42
2.434359
GTGCCCTCCTGTACGTGC
60.434
66.667
0.00
0.00
0.00
5.34
42
43
4.063967
TGCCCTCCTGTACGTGCG
62.064
66.667
0.00
0.00
0.00
5.34
44
45
3.760035
CCCTCCTGTACGTGCGCT
61.760
66.667
9.73
0.00
0.00
5.92
45
46
2.507102
CCTCCTGTACGTGCGCTG
60.507
66.667
9.73
3.37
0.00
5.18
46
47
3.181967
CTCCTGTACGTGCGCTGC
61.182
66.667
9.73
0.00
0.00
5.25
60
61
3.452786
CTGCGCGAGGAAGAGGGA
61.453
66.667
12.10
0.00
0.00
4.20
61
62
3.423162
CTGCGCGAGGAAGAGGGAG
62.423
68.421
12.10
0.00
0.00
4.30
62
63
3.141488
GCGCGAGGAAGAGGGAGA
61.141
66.667
12.10
0.00
0.00
3.71
63
64
2.802106
CGCGAGGAAGAGGGAGAC
59.198
66.667
0.00
0.00
0.00
3.36
74
75
4.587189
GGGAGACCGGCCGAATCG
62.587
72.222
30.73
12.89
43.64
3.34
75
76
3.834799
GGAGACCGGCCGAATCGT
61.835
66.667
30.73
16.76
0.00
3.73
76
77
2.183555
GAGACCGGCCGAATCGTT
59.816
61.111
30.73
8.83
0.00
3.85
77
78
1.877165
GAGACCGGCCGAATCGTTC
60.877
63.158
30.73
14.08
0.00
3.95
78
79
2.889018
GACCGGCCGAATCGTTCC
60.889
66.667
30.73
0.48
0.00
3.62
79
80
4.807039
ACCGGCCGAATCGTTCCG
62.807
66.667
30.73
20.95
39.46
4.30
84
85
4.807039
CCGAATCGTTCCGCCGGT
62.807
66.667
1.63
0.00
35.83
5.28
85
86
3.550992
CGAATCGTTCCGCCGGTG
61.551
66.667
8.42
8.42
0.00
4.94
86
87
3.861263
GAATCGTTCCGCCGGTGC
61.861
66.667
10.27
0.00
0.00
5.01
104
105
3.676605
CCCGGCCCCAAACGTTTC
61.677
66.667
11.37
0.00
0.00
2.78
105
106
3.676605
CCGGCCCCAAACGTTTCC
61.677
66.667
11.37
8.47
0.00
3.13
106
107
3.676605
CGGCCCCAAACGTTTCCC
61.677
66.667
11.37
8.33
0.00
3.97
107
108
2.522193
GGCCCCAAACGTTTCCCA
60.522
61.111
11.37
0.00
0.00
4.37
108
109
1.911269
GGCCCCAAACGTTTCCCAT
60.911
57.895
11.37
0.00
0.00
4.00
109
110
1.476845
GGCCCCAAACGTTTCCCATT
61.477
55.000
11.37
0.00
0.00
3.16
110
111
1.258676
GCCCCAAACGTTTCCCATTA
58.741
50.000
11.37
0.00
0.00
1.90
111
112
1.828595
GCCCCAAACGTTTCCCATTAT
59.171
47.619
11.37
0.00
0.00
1.28
112
113
2.235155
GCCCCAAACGTTTCCCATTATT
59.765
45.455
11.37
0.00
0.00
1.40
113
114
3.447944
GCCCCAAACGTTTCCCATTATTA
59.552
43.478
11.37
0.00
0.00
0.98
114
115
4.081586
GCCCCAAACGTTTCCCATTATTAA
60.082
41.667
11.37
0.00
0.00
1.40
115
116
5.569026
GCCCCAAACGTTTCCCATTATTAAA
60.569
40.000
11.37
0.00
0.00
1.52
116
117
6.103330
CCCCAAACGTTTCCCATTATTAAAG
58.897
40.000
11.37
0.00
0.00
1.85
117
118
6.103330
CCCAAACGTTTCCCATTATTAAAGG
58.897
40.000
11.37
4.45
0.00
3.11
118
119
6.103330
CCAAACGTTTCCCATTATTAAAGGG
58.897
40.000
11.37
9.99
44.22
3.95
119
120
6.295405
CCAAACGTTTCCCATTATTAAAGGGT
60.295
38.462
11.37
0.00
43.31
4.34
120
121
6.921486
AACGTTTCCCATTATTAAAGGGTT
57.079
33.333
14.74
1.30
43.31
4.11
121
122
6.519679
ACGTTTCCCATTATTAAAGGGTTC
57.480
37.500
14.74
7.27
43.31
3.62
122
123
6.011481
ACGTTTCCCATTATTAAAGGGTTCA
58.989
36.000
14.74
0.76
43.31
3.18
123
124
6.152154
ACGTTTCCCATTATTAAAGGGTTCAG
59.848
38.462
14.74
9.02
43.31
3.02
124
125
6.338146
GTTTCCCATTATTAAAGGGTTCAGC
58.662
40.000
14.74
2.04
43.31
4.26
125
126
4.204012
TCCCATTATTAAAGGGTTCAGCG
58.796
43.478
14.74
0.00
43.31
5.18
126
127
3.317993
CCCATTATTAAAGGGTTCAGCGG
59.682
47.826
8.33
0.00
34.64
5.52
127
128
3.951680
CCATTATTAAAGGGTTCAGCGGT
59.048
43.478
0.00
0.00
31.72
5.68
128
129
4.202010
CCATTATTAAAGGGTTCAGCGGTG
60.202
45.833
8.67
8.67
31.72
4.94
129
130
2.871096
ATTAAAGGGTTCAGCGGTGA
57.129
45.000
14.39
14.39
0.00
4.02
130
131
2.642154
TTAAAGGGTTCAGCGGTGAA
57.358
45.000
25.16
25.16
40.55
3.18
131
132
2.178912
TAAAGGGTTCAGCGGTGAAG
57.821
50.000
28.94
0.00
43.55
3.02
132
133
0.472471
AAAGGGTTCAGCGGTGAAGA
59.528
50.000
28.94
7.66
43.55
2.87
133
134
0.693049
AAGGGTTCAGCGGTGAAGAT
59.307
50.000
28.94
15.39
43.55
2.40
134
135
0.693049
AGGGTTCAGCGGTGAAGATT
59.307
50.000
28.94
14.65
43.55
2.40
135
136
0.804989
GGGTTCAGCGGTGAAGATTG
59.195
55.000
28.94
0.00
43.55
2.67
136
137
0.169009
GGTTCAGCGGTGAAGATTGC
59.831
55.000
28.94
16.84
43.55
3.56
137
138
0.179215
GTTCAGCGGTGAAGATTGCG
60.179
55.000
28.94
0.00
43.55
4.85
138
139
1.298157
TTCAGCGGTGAAGATTGCGG
61.298
55.000
25.16
0.00
37.79
5.69
139
140
3.127533
AGCGGTGAAGATTGCGGC
61.128
61.111
0.00
0.00
0.00
6.53
140
141
3.127533
GCGGTGAAGATTGCGGCT
61.128
61.111
0.00
0.00
0.00
5.52
141
142
3.093278
CGGTGAAGATTGCGGCTC
58.907
61.111
0.00
0.00
0.00
4.70
142
143
2.464459
CGGTGAAGATTGCGGCTCC
61.464
63.158
0.00
0.00
0.00
4.70
143
144
1.377202
GGTGAAGATTGCGGCTCCA
60.377
57.895
0.00
0.00
0.00
3.86
144
145
1.372087
GGTGAAGATTGCGGCTCCAG
61.372
60.000
0.00
0.00
0.00
3.86
145
146
0.391661
GTGAAGATTGCGGCTCCAGA
60.392
55.000
0.00
0.00
0.00
3.86
146
147
0.107993
TGAAGATTGCGGCTCCAGAG
60.108
55.000
0.00
0.00
0.00
3.35
147
148
0.107945
GAAGATTGCGGCTCCAGAGT
60.108
55.000
0.00
0.00
0.00
3.24
148
149
0.392193
AAGATTGCGGCTCCAGAGTG
60.392
55.000
0.00
0.00
0.00
3.51
149
150
2.437359
ATTGCGGCTCCAGAGTGC
60.437
61.111
0.00
6.97
34.20
4.40
150
151
2.866085
GATTGCGGCTCCAGAGTGCT
62.866
60.000
0.00
0.00
34.53
4.40
151
152
3.889134
TTGCGGCTCCAGAGTGCTG
62.889
63.158
0.00
0.00
40.99
4.41
161
162
2.393271
CAGAGTGCTGGTTCTTAGGG
57.607
55.000
0.00
0.00
38.51
3.53
162
163
1.902508
CAGAGTGCTGGTTCTTAGGGA
59.097
52.381
0.00
0.00
38.51
4.20
163
164
1.903183
AGAGTGCTGGTTCTTAGGGAC
59.097
52.381
0.00
0.00
0.00
4.46
164
165
1.623811
GAGTGCTGGTTCTTAGGGACA
59.376
52.381
0.00
0.00
0.00
4.02
165
166
1.348036
AGTGCTGGTTCTTAGGGACAC
59.652
52.381
0.00
0.00
0.00
3.67
166
167
1.071699
GTGCTGGTTCTTAGGGACACA
59.928
52.381
0.00
0.00
0.00
3.72
167
168
1.985159
TGCTGGTTCTTAGGGACACAT
59.015
47.619
0.00
0.00
0.00
3.21
168
169
2.290260
TGCTGGTTCTTAGGGACACATG
60.290
50.000
0.00
0.00
0.00
3.21
169
170
2.359900
CTGGTTCTTAGGGACACATGC
58.640
52.381
0.00
0.00
0.00
4.06
170
171
1.702401
TGGTTCTTAGGGACACATGCA
59.298
47.619
0.00
0.00
0.00
3.96
171
172
2.084546
GGTTCTTAGGGACACATGCAC
58.915
52.381
0.00
0.00
0.00
4.57
172
173
1.732259
GTTCTTAGGGACACATGCACG
59.268
52.381
0.00
0.00
0.00
5.34
173
174
1.262417
TCTTAGGGACACATGCACGA
58.738
50.000
0.00
0.00
0.00
4.35
174
175
1.621317
TCTTAGGGACACATGCACGAA
59.379
47.619
0.00
0.00
0.00
3.85
175
176
2.002586
CTTAGGGACACATGCACGAAG
58.997
52.381
0.00
0.00
0.00
3.79
176
177
1.262417
TAGGGACACATGCACGAAGA
58.738
50.000
0.00
0.00
0.00
2.87
177
178
0.320771
AGGGACACATGCACGAAGAC
60.321
55.000
0.00
0.00
0.00
3.01
178
179
0.320771
GGGACACATGCACGAAGACT
60.321
55.000
0.00
0.00
0.00
3.24
179
180
1.512926
GGACACATGCACGAAGACTT
58.487
50.000
0.00
0.00
0.00
3.01
180
181
1.873591
GGACACATGCACGAAGACTTT
59.126
47.619
0.00
0.00
0.00
2.66
181
182
2.096218
GGACACATGCACGAAGACTTTC
60.096
50.000
0.00
0.00
0.00
2.62
198
199
9.141400
GAAGACTTTCGACTATATTTGACAAGT
57.859
33.333
0.00
7.20
0.00
3.16
199
200
9.490379
AAGACTTTCGACTATATTTGACAAGTT
57.510
29.630
0.00
0.00
0.00
2.66
200
201
9.141400
AGACTTTCGACTATATTTGACAAGTTC
57.859
33.333
0.00
0.00
0.00
3.01
201
202
8.827177
ACTTTCGACTATATTTGACAAGTTCA
57.173
30.769
0.00
0.00
0.00
3.18
202
203
8.926710
ACTTTCGACTATATTTGACAAGTTCAG
58.073
33.333
0.00
0.00
34.94
3.02
203
204
7.827819
TTCGACTATATTTGACAAGTTCAGG
57.172
36.000
0.00
0.00
34.94
3.86
204
205
6.931838
TCGACTATATTTGACAAGTTCAGGT
58.068
36.000
0.00
0.00
34.94
4.00
205
206
7.033791
TCGACTATATTTGACAAGTTCAGGTC
58.966
38.462
0.00
0.00
34.94
3.85
239
240
5.125578
GGTTCAGGGACCTTGATGTAATTTC
59.874
44.000
7.20
0.00
36.73
2.17
259
260
8.762481
AATTTCCATTATACTTGGGGTACTTC
57.238
34.615
0.00
0.00
34.85
3.01
308
310
8.918202
TTAGATCAGAGCCTCTTTTGTTAAAA
57.082
30.769
0.00
0.00
0.00
1.52
335
337
2.536928
GCATTGGACGATTTGCGAGTAC
60.537
50.000
0.00
0.00
44.57
2.73
377
379
7.715657
TCAGCATTGCCTCGAAAATTAAATAT
58.284
30.769
4.70
0.00
0.00
1.28
409
412
2.853731
AAACCGCAATTGTTTCACGA
57.146
40.000
7.40
0.00
30.34
4.35
410
413
2.113910
AACCGCAATTGTTTCACGAC
57.886
45.000
7.40
0.00
0.00
4.34
411
414
1.018148
ACCGCAATTGTTTCACGACA
58.982
45.000
7.40
0.00
0.00
4.35
435
438
4.582701
AATTTTCAACGTGATCCAAGCA
57.417
36.364
0.00
0.00
0.00
3.91
453
456
5.152097
CAAGCAGTTGATGACTTTGATGTC
58.848
41.667
0.00
0.00
36.10
3.06
478
481
2.401017
TGATTCCGAGCGTATCTTCG
57.599
50.000
0.00
0.00
0.00
3.79
619
659
8.948631
ATCTGTGGTGATACATTTTAGTACTG
57.051
34.615
5.39
0.00
0.00
2.74
620
660
7.903145
TCTGTGGTGATACATTTTAGTACTGT
58.097
34.615
5.39
0.00
0.00
3.55
621
661
9.027202
TCTGTGGTGATACATTTTAGTACTGTA
57.973
33.333
5.39
0.00
0.00
2.74
622
662
9.817809
CTGTGGTGATACATTTTAGTACTGTAT
57.182
33.333
5.39
5.03
38.46
2.29
681
721
1.280421
GGAAGATGGCCACAGTCTCTT
59.720
52.381
16.64
16.64
0.00
2.85
754
796
3.915437
ACGAATTTGATCTTTTGCCGT
57.085
38.095
0.00
0.00
0.00
5.68
799
841
1.674764
CCAGCAGTGCAACCAACCAA
61.675
55.000
19.20
0.00
37.80
3.67
800
842
0.528249
CAGCAGTGCAACCAACCAAC
60.528
55.000
19.20
0.00
37.80
3.77
801
843
1.227234
GCAGTGCAACCAACCAACC
60.227
57.895
11.09
0.00
37.80
3.77
802
844
1.954362
GCAGTGCAACCAACCAACCA
61.954
55.000
11.09
0.00
37.80
3.67
936
978
0.836400
TCTCGTTCCTTCCCCTGCTT
60.836
55.000
0.00
0.00
0.00
3.91
938
980
1.377333
CGTTCCTTCCCCTGCTTCC
60.377
63.158
0.00
0.00
0.00
3.46
939
981
1.377333
GTTCCTTCCCCTGCTTCCG
60.377
63.158
0.00
0.00
0.00
4.30
940
982
3.268103
TTCCTTCCCCTGCTTCCGC
62.268
63.158
0.00
0.00
0.00
5.54
942
984
2.352805
CTTCCCCTGCTTCCGCTT
59.647
61.111
0.00
0.00
36.97
4.68
943
985
1.746991
CTTCCCCTGCTTCCGCTTC
60.747
63.158
0.00
0.00
36.97
3.86
944
986
3.268103
TTCCCCTGCTTCCGCTTCC
62.268
63.158
0.00
0.00
36.97
3.46
1731
1773
1.361668
GCATCCGCAAGCTCGAGAAA
61.362
55.000
18.75
0.00
38.36
2.52
1911
1953
1.449601
GTCGACGGTGGCCATCAAT
60.450
57.895
18.15
2.45
0.00
2.57
2115
2157
1.604378
CAGGGTCCTCGCCATCTTT
59.396
57.895
0.00
0.00
0.00
2.52
2672
2714
5.536916
GTGCCACTTCATACTCCTACTAGAT
59.463
44.000
0.00
0.00
0.00
1.98
2929
2977
5.638657
ACGGTAGTATTTGTGCGTGAATTTA
59.361
36.000
0.00
0.00
0.00
1.40
2950
2998
1.689273
CCCAGTAGATCCTACTGTGGC
59.311
57.143
24.21
0.00
42.37
5.01
3060
3211
4.270808
CAGGCCTCATTTGTTTGTTTGTTC
59.729
41.667
0.00
0.00
0.00
3.18
3084
3235
8.970691
TCTACTGTAAAACCGTAGAACAATAC
57.029
34.615
8.36
0.00
40.39
1.89
3215
3366
7.886629
TGTTATGTTCTACCTAACTACGGAT
57.113
36.000
0.00
0.00
32.65
4.18
3259
3410
3.578282
TGCCTTGATCTGAGTAGTTCACA
59.422
43.478
0.00
0.00
33.53
3.58
3260
3411
4.223700
TGCCTTGATCTGAGTAGTTCACAT
59.776
41.667
0.00
0.00
33.53
3.21
3282
3433
7.917505
CACATTCCTTCCTGTAAATAATGCTTC
59.082
37.037
0.00
0.00
0.00
3.86
3310
3461
2.290197
TGAATGTGTGGTGCAGCTGATA
60.290
45.455
20.43
1.74
0.00
2.15
3312
3463
1.741528
TGTGTGGTGCAGCTGATATG
58.258
50.000
20.43
0.00
0.00
1.78
3370
3834
4.002982
GCATCACACTGTTAGAATGTCCA
58.997
43.478
0.00
0.00
0.00
4.02
3385
3849
6.802608
AGAATGTCCAATGCAATATCTTGTG
58.197
36.000
0.00
0.00
34.69
3.33
3397
3861
5.123820
GCAATATCTTGTGGCAGTTGAAGTA
59.876
40.000
0.00
0.00
34.69
2.24
3407
3871
1.808945
CAGTTGAAGTAGGGCAAGCTG
59.191
52.381
0.00
0.00
0.00
4.24
3413
3877
2.134789
AGTAGGGCAAGCTGGAATTG
57.865
50.000
0.00
0.00
0.00
2.32
3416
3880
3.459598
AGTAGGGCAAGCTGGAATTGATA
59.540
43.478
0.00
0.00
0.00
2.15
3423
3887
7.071572
AGGGCAAGCTGGAATTGATAAAATATT
59.928
33.333
0.00
0.00
0.00
1.28
3511
3975
5.872070
CAGAAGAGATGTAGAAGTGTTTCCC
59.128
44.000
0.00
0.00
33.64
3.97
3516
3980
3.485463
TGTAGAAGTGTTTCCCCTGTG
57.515
47.619
0.00
0.00
33.64
3.66
3523
3987
5.546499
AGAAGTGTTTCCCCTGTGTTATCTA
59.454
40.000
0.00
0.00
33.64
1.98
3542
4006
9.093970
GTTATCTACACACAATGCACAGTTATA
57.906
33.333
0.00
0.00
0.00
0.98
3567
4031
1.171308
CCAGGTGCATGGTCTTTCTG
58.829
55.000
0.00
0.00
35.47
3.02
3575
4039
3.817084
TGCATGGTCTTTCTGTTGAGAAG
59.183
43.478
0.00
0.00
39.44
2.85
3609
4073
2.928036
TCCTGTCATGGAGAAGGAGA
57.072
50.000
0.00
0.00
32.30
3.71
3614
4078
3.095332
TGTCATGGAGAAGGAGACAGAG
58.905
50.000
0.00
0.00
34.59
3.35
3615
4079
2.430332
GTCATGGAGAAGGAGACAGAGG
59.570
54.545
0.00
0.00
0.00
3.69
3616
4080
1.761784
CATGGAGAAGGAGACAGAGGG
59.238
57.143
0.00
0.00
0.00
4.30
3635
4099
2.172293
GGGAGATCTTGTGCCTCAATCT
59.828
50.000
0.00
0.00
35.35
2.40
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
24
25
2.434359
GCACGTACAGGAGGGCAC
60.434
66.667
0.00
0.00
0.00
5.01
25
26
4.063967
CGCACGTACAGGAGGGCA
62.064
66.667
0.00
0.00
0.00
5.36
27
28
3.760035
AGCGCACGTACAGGAGGG
61.760
66.667
11.47
0.00
0.00
4.30
28
29
2.507102
CAGCGCACGTACAGGAGG
60.507
66.667
11.47
0.00
0.00
4.30
29
30
3.181967
GCAGCGCACGTACAGGAG
61.182
66.667
11.47
0.00
0.00
3.69
43
44
3.423162
CTCCCTCTTCCTCGCGCAG
62.423
68.421
8.75
3.84
0.00
5.18
44
45
3.452786
CTCCCTCTTCCTCGCGCA
61.453
66.667
8.75
0.00
0.00
6.09
45
46
3.141488
TCTCCCTCTTCCTCGCGC
61.141
66.667
0.00
0.00
0.00
6.86
46
47
2.776913
GGTCTCCCTCTTCCTCGCG
61.777
68.421
0.00
0.00
0.00
5.87
47
48
2.776913
CGGTCTCCCTCTTCCTCGC
61.777
68.421
0.00
0.00
0.00
5.03
48
49
2.122167
CCGGTCTCCCTCTTCCTCG
61.122
68.421
0.00
0.00
0.00
4.63
49
50
2.428085
GCCGGTCTCCCTCTTCCTC
61.428
68.421
1.90
0.00
0.00
3.71
50
51
2.364448
GCCGGTCTCCCTCTTCCT
60.364
66.667
1.90
0.00
0.00
3.36
51
52
3.471806
GGCCGGTCTCCCTCTTCC
61.472
72.222
1.90
0.00
0.00
3.46
52
53
3.839432
CGGCCGGTCTCCCTCTTC
61.839
72.222
20.10
0.00
0.00
2.87
53
54
3.899545
TTCGGCCGGTCTCCCTCTT
62.900
63.158
27.83
0.00
0.00
2.85
54
55
3.680920
ATTCGGCCGGTCTCCCTCT
62.681
63.158
27.83
0.00
0.00
3.69
55
56
3.153270
GATTCGGCCGGTCTCCCTC
62.153
68.421
27.83
7.92
0.00
4.30
56
57
3.155167
GATTCGGCCGGTCTCCCT
61.155
66.667
27.83
1.75
0.00
4.20
57
58
4.587189
CGATTCGGCCGGTCTCCC
62.587
72.222
27.83
7.99
0.00
4.30
58
59
3.366739
AACGATTCGGCCGGTCTCC
62.367
63.158
27.83
9.47
0.00
3.71
59
60
1.877165
GAACGATTCGGCCGGTCTC
60.877
63.158
27.83
17.86
40.30
3.36
60
61
2.183555
GAACGATTCGGCCGGTCT
59.816
61.111
27.83
10.31
40.30
3.85
61
62
2.889018
GGAACGATTCGGCCGGTC
60.889
66.667
27.83
21.93
42.50
4.79
87
88
3.676605
GAAACGTTTGGGGCCGGG
61.677
66.667
20.10
0.00
0.00
5.73
88
89
3.676605
GGAAACGTTTGGGGCCGG
61.677
66.667
20.10
0.00
0.00
6.13
89
90
3.676605
GGGAAACGTTTGGGGCCG
61.677
66.667
20.10
0.00
0.00
6.13
90
91
1.476845
AATGGGAAACGTTTGGGGCC
61.477
55.000
20.10
12.96
0.00
5.80
91
92
1.258676
TAATGGGAAACGTTTGGGGC
58.741
50.000
20.10
3.37
0.00
5.80
92
93
5.662674
TTAATAATGGGAAACGTTTGGGG
57.337
39.130
20.10
0.00
0.00
4.96
93
94
6.103330
CCTTTAATAATGGGAAACGTTTGGG
58.897
40.000
20.10
0.00
0.00
4.12
94
95
6.103330
CCCTTTAATAATGGGAAACGTTTGG
58.897
40.000
20.10
8.17
46.23
3.28
95
96
6.693466
ACCCTTTAATAATGGGAAACGTTTG
58.307
36.000
25.30
0.18
46.23
2.93
96
97
6.921486
ACCCTTTAATAATGGGAAACGTTT
57.079
33.333
25.30
14.57
46.23
3.60
97
98
6.494146
TGAACCCTTTAATAATGGGAAACGTT
59.506
34.615
25.30
12.05
46.23
3.99
98
99
6.011481
TGAACCCTTTAATAATGGGAAACGT
58.989
36.000
25.30
4.93
46.23
3.99
99
100
6.518208
TGAACCCTTTAATAATGGGAAACG
57.482
37.500
25.30
4.34
46.23
3.60
100
101
6.338146
GCTGAACCCTTTAATAATGGGAAAC
58.662
40.000
25.30
16.65
46.23
2.78
101
102
5.126384
CGCTGAACCCTTTAATAATGGGAAA
59.874
40.000
25.30
12.09
46.23
3.13
102
103
4.642885
CGCTGAACCCTTTAATAATGGGAA
59.357
41.667
25.30
12.36
46.23
3.97
103
104
4.204012
CGCTGAACCCTTTAATAATGGGA
58.796
43.478
25.30
7.18
46.23
4.37
105
106
3.951680
ACCGCTGAACCCTTTAATAATGG
59.048
43.478
0.00
0.00
0.00
3.16
106
107
4.638421
TCACCGCTGAACCCTTTAATAATG
59.362
41.667
0.00
0.00
0.00
1.90
107
108
4.850680
TCACCGCTGAACCCTTTAATAAT
58.149
39.130
0.00
0.00
0.00
1.28
108
109
4.289238
TCACCGCTGAACCCTTTAATAA
57.711
40.909
0.00
0.00
0.00
1.40
109
110
3.985019
TCACCGCTGAACCCTTTAATA
57.015
42.857
0.00
0.00
0.00
0.98
110
111
2.871096
TCACCGCTGAACCCTTTAAT
57.129
45.000
0.00
0.00
0.00
1.40
111
112
2.105134
TCTTCACCGCTGAACCCTTTAA
59.895
45.455
0.00
0.00
32.68
1.52
112
113
1.695242
TCTTCACCGCTGAACCCTTTA
59.305
47.619
0.00
0.00
32.68
1.85
113
114
0.472471
TCTTCACCGCTGAACCCTTT
59.528
50.000
0.00
0.00
32.68
3.11
114
115
0.693049
ATCTTCACCGCTGAACCCTT
59.307
50.000
0.00
0.00
32.68
3.95
115
116
0.693049
AATCTTCACCGCTGAACCCT
59.307
50.000
0.00
0.00
32.68
4.34
116
117
0.804989
CAATCTTCACCGCTGAACCC
59.195
55.000
0.00
0.00
32.68
4.11
117
118
0.169009
GCAATCTTCACCGCTGAACC
59.831
55.000
0.00
0.00
32.68
3.62
118
119
0.179215
CGCAATCTTCACCGCTGAAC
60.179
55.000
0.00
0.00
32.68
3.18
119
120
1.298157
CCGCAATCTTCACCGCTGAA
61.298
55.000
0.00
0.00
35.04
3.02
120
121
1.741401
CCGCAATCTTCACCGCTGA
60.741
57.895
0.00
0.00
0.00
4.26
121
122
2.787249
CCGCAATCTTCACCGCTG
59.213
61.111
0.00
0.00
0.00
5.18
122
123
3.127533
GCCGCAATCTTCACCGCT
61.128
61.111
0.00
0.00
0.00
5.52
123
124
3.100862
GAGCCGCAATCTTCACCGC
62.101
63.158
0.00
0.00
0.00
5.68
124
125
2.464459
GGAGCCGCAATCTTCACCG
61.464
63.158
0.00
0.00
0.00
4.94
125
126
1.372087
CTGGAGCCGCAATCTTCACC
61.372
60.000
0.00
0.00
0.00
4.02
126
127
0.391661
TCTGGAGCCGCAATCTTCAC
60.392
55.000
0.00
0.00
0.00
3.18
127
128
0.107993
CTCTGGAGCCGCAATCTTCA
60.108
55.000
0.00
0.00
0.00
3.02
128
129
0.107945
ACTCTGGAGCCGCAATCTTC
60.108
55.000
0.00
0.00
0.00
2.87
129
130
0.392193
CACTCTGGAGCCGCAATCTT
60.392
55.000
0.00
0.00
0.00
2.40
130
131
1.220206
CACTCTGGAGCCGCAATCT
59.780
57.895
0.00
0.00
0.00
2.40
131
132
2.467826
GCACTCTGGAGCCGCAATC
61.468
63.158
7.46
0.00
32.33
2.67
132
133
2.437359
GCACTCTGGAGCCGCAAT
60.437
61.111
7.46
0.00
32.33
3.56
133
134
3.630013
AGCACTCTGGAGCCGCAA
61.630
61.111
12.81
0.00
33.90
4.85
134
135
4.383861
CAGCACTCTGGAGCCGCA
62.384
66.667
12.81
0.00
36.68
5.69
142
143
1.902508
TCCCTAAGAACCAGCACTCTG
59.097
52.381
0.00
0.00
40.02
3.35
143
144
1.903183
GTCCCTAAGAACCAGCACTCT
59.097
52.381
0.00
0.00
0.00
3.24
144
145
1.623811
TGTCCCTAAGAACCAGCACTC
59.376
52.381
0.00
0.00
0.00
3.51
145
146
1.348036
GTGTCCCTAAGAACCAGCACT
59.652
52.381
0.00
0.00
0.00
4.40
146
147
1.071699
TGTGTCCCTAAGAACCAGCAC
59.928
52.381
0.00
0.00
0.00
4.40
147
148
1.429930
TGTGTCCCTAAGAACCAGCA
58.570
50.000
0.00
0.00
0.00
4.41
148
149
2.359900
CATGTGTCCCTAAGAACCAGC
58.640
52.381
0.00
0.00
0.00
4.85
149
150
2.290260
TGCATGTGTCCCTAAGAACCAG
60.290
50.000
0.00
0.00
0.00
4.00
150
151
1.702401
TGCATGTGTCCCTAAGAACCA
59.298
47.619
0.00
0.00
0.00
3.67
151
152
2.084546
GTGCATGTGTCCCTAAGAACC
58.915
52.381
0.00
0.00
0.00
3.62
152
153
1.732259
CGTGCATGTGTCCCTAAGAAC
59.268
52.381
0.00
0.00
0.00
3.01
153
154
1.621317
TCGTGCATGTGTCCCTAAGAA
59.379
47.619
5.68
0.00
0.00
2.52
154
155
1.262417
TCGTGCATGTGTCCCTAAGA
58.738
50.000
5.68
0.00
0.00
2.10
155
156
2.002586
CTTCGTGCATGTGTCCCTAAG
58.997
52.381
5.68
0.00
0.00
2.18
156
157
1.621317
TCTTCGTGCATGTGTCCCTAA
59.379
47.619
5.68
0.00
0.00
2.69
157
158
1.067142
GTCTTCGTGCATGTGTCCCTA
60.067
52.381
5.68
0.00
0.00
3.53
158
159
0.320771
GTCTTCGTGCATGTGTCCCT
60.321
55.000
5.68
0.00
0.00
4.20
159
160
0.320771
AGTCTTCGTGCATGTGTCCC
60.321
55.000
5.68
0.00
0.00
4.46
160
161
1.512926
AAGTCTTCGTGCATGTGTCC
58.487
50.000
5.68
0.00
0.00
4.02
161
162
3.174799
GAAAGTCTTCGTGCATGTGTC
57.825
47.619
5.68
0.00
0.00
3.67
172
173
9.141400
ACTTGTCAAATATAGTCGAAAGTCTTC
57.859
33.333
0.00
0.00
0.00
2.87
173
174
9.490379
AACTTGTCAAATATAGTCGAAAGTCTT
57.510
29.630
0.00
0.00
0.00
3.01
174
175
9.141400
GAACTTGTCAAATATAGTCGAAAGTCT
57.859
33.333
0.00
0.00
0.00
3.24
175
176
8.922676
TGAACTTGTCAAATATAGTCGAAAGTC
58.077
33.333
0.00
0.00
31.51
3.01
176
177
8.827177
TGAACTTGTCAAATATAGTCGAAAGT
57.173
30.769
0.00
0.00
31.51
2.66
177
178
8.383619
CCTGAACTTGTCAAATATAGTCGAAAG
58.616
37.037
0.00
0.00
35.22
2.62
178
179
7.876068
ACCTGAACTTGTCAAATATAGTCGAAA
59.124
33.333
0.00
0.00
35.22
3.46
179
180
7.383687
ACCTGAACTTGTCAAATATAGTCGAA
58.616
34.615
0.00
0.00
35.22
3.71
180
181
6.931838
ACCTGAACTTGTCAAATATAGTCGA
58.068
36.000
0.00
0.00
35.22
4.20
181
182
7.036220
AGACCTGAACTTGTCAAATATAGTCG
58.964
38.462
0.00
0.00
35.22
4.18
182
183
8.660373
CAAGACCTGAACTTGTCAAATATAGTC
58.340
37.037
0.00
0.00
39.57
2.59
183
184
8.553459
CAAGACCTGAACTTGTCAAATATAGT
57.447
34.615
0.00
0.00
39.57
2.12
194
195
3.313526
CCACTGAACAAGACCTGAACTTG
59.686
47.826
0.00
0.00
46.69
3.16
195
196
3.054361
ACCACTGAACAAGACCTGAACTT
60.054
43.478
0.00
0.00
0.00
2.66
196
197
2.505819
ACCACTGAACAAGACCTGAACT
59.494
45.455
0.00
0.00
0.00
3.01
197
198
2.919228
ACCACTGAACAAGACCTGAAC
58.081
47.619
0.00
0.00
0.00
3.18
198
199
3.054728
TGAACCACTGAACAAGACCTGAA
60.055
43.478
0.00
0.00
0.00
3.02
199
200
2.503765
TGAACCACTGAACAAGACCTGA
59.496
45.455
0.00
0.00
0.00
3.86
200
201
2.874701
CTGAACCACTGAACAAGACCTG
59.125
50.000
0.00
0.00
0.00
4.00
201
202
2.158755
CCTGAACCACTGAACAAGACCT
60.159
50.000
0.00
0.00
0.00
3.85
202
203
2.222027
CCTGAACCACTGAACAAGACC
58.778
52.381
0.00
0.00
0.00
3.85
203
204
2.158813
TCCCTGAACCACTGAACAAGAC
60.159
50.000
0.00
0.00
0.00
3.01
204
205
2.123589
TCCCTGAACCACTGAACAAGA
58.876
47.619
0.00
0.00
0.00
3.02
205
206
2.222027
GTCCCTGAACCACTGAACAAG
58.778
52.381
0.00
0.00
0.00
3.16
239
240
5.286267
ACGAAGTACCCCAAGTATAATGG
57.714
43.478
0.00
0.00
41.94
3.16
285
286
7.823745
TTTTTAACAAAAGAGGCTCTGATCT
57.176
32.000
19.53
0.00
0.00
2.75
308
310
3.066380
GCAAATCGTCCAATGCCTTTTT
58.934
40.909
0.00
0.00
32.73
1.94
313
315
0.248215
CTCGCAAATCGTCCAATGCC
60.248
55.000
0.00
0.00
39.67
4.40
319
321
3.673809
GGATATGTACTCGCAAATCGTCC
59.326
47.826
0.00
0.00
39.67
4.79
377
379
4.920640
TTGCGGTTTTCTAATTTGACCA
57.079
36.364
0.00
0.00
0.00
4.02
409
412
5.255710
TGGATCACGTTGAAAATTTGTGT
57.744
34.783
0.00
0.00
31.22
3.72
410
413
5.332506
GCTTGGATCACGTTGAAAATTTGTG
60.333
40.000
0.00
0.00
0.00
3.33
411
414
4.744631
GCTTGGATCACGTTGAAAATTTGT
59.255
37.500
0.00
0.00
0.00
2.83
453
456
2.331809
TACGCTCGGAATCATCGATG
57.668
50.000
19.61
19.61
36.01
3.84
478
481
2.894387
GCGCTCTGCTCCATCCAC
60.894
66.667
0.00
0.00
41.73
4.02
799
841
2.943978
CGAGGAGCCGAAACCTGGT
61.944
63.158
0.00
0.00
36.57
4.00
800
842
2.125512
CGAGGAGCCGAAACCTGG
60.126
66.667
0.00
0.00
36.57
4.45
801
843
2.125512
CCGAGGAGCCGAAACCTG
60.126
66.667
0.00
0.00
36.57
4.00
802
844
2.283676
TCCGAGGAGCCGAAACCT
60.284
61.111
0.00
0.00
39.41
3.50
1800
1842
2.731571
CGAGAGGATGGGCCCGAAA
61.732
63.158
19.37
0.00
37.37
3.46
1848
1890
1.003355
CGGGAAGAAGAGCTGCCAA
60.003
57.895
0.00
0.00
45.26
4.52
2067
2109
4.598894
CCGATGCGGCTGAGGAGG
62.599
72.222
0.00
0.00
41.17
4.30
2414
2456
0.179108
CTGGAAGTAGTACGGGCTGC
60.179
60.000
0.00
0.00
0.00
5.25
2672
2714
5.042463
TGTAGTGTCATTCTGAAACCCAA
57.958
39.130
0.00
0.00
35.19
4.12
2717
2759
8.290325
GCACTTTCTTGTTTGCTTATTAGTAGT
58.710
33.333
0.00
0.00
32.00
2.73
2718
2760
7.750903
GGCACTTTCTTGTTTGCTTATTAGTAG
59.249
37.037
0.00
0.00
35.24
2.57
2719
2761
7.447238
AGGCACTTTCTTGTTTGCTTATTAGTA
59.553
33.333
0.00
0.00
27.25
1.82
2777
2825
8.465999
CCACTGTTTGGCTGATTAATAAATGTA
58.534
33.333
0.00
0.00
39.07
2.29
2906
2954
4.593597
AATTCACGCACAAATACTACCG
57.406
40.909
0.00
0.00
0.00
4.02
2929
2977
2.955461
GCCACAGTAGGATCTACTGGGT
60.955
54.545
28.02
13.35
45.02
4.51
2950
2998
3.829886
AAAATACATGCAGTCCACACG
57.170
42.857
0.00
0.00
0.00
4.49
3060
3211
8.976986
AGTATTGTTCTACGGTTTTACAGTAG
57.023
34.615
9.82
9.82
44.58
2.57
3195
3346
7.657023
AAAGATCCGTAGTTAGGTAGAACAT
57.343
36.000
0.00
0.00
0.00
2.71
3199
3350
6.888632
ACAGAAAAGATCCGTAGTTAGGTAGA
59.111
38.462
0.00
0.00
0.00
2.59
3212
3363
4.051237
GCACACCAAAACAGAAAAGATCC
58.949
43.478
0.00
0.00
0.00
3.36
3215
3366
4.799564
AAGCACACCAAAACAGAAAAGA
57.200
36.364
0.00
0.00
0.00
2.52
3259
3410
7.125391
TGGAAGCATTATTTACAGGAAGGAAT
58.875
34.615
0.00
0.00
0.00
3.01
3260
3411
6.489603
TGGAAGCATTATTTACAGGAAGGAA
58.510
36.000
0.00
0.00
0.00
3.36
3282
3433
0.528924
CACCACACATTCATGGCTGG
59.471
55.000
0.00
4.25
39.84
4.85
3310
3461
5.297776
CCATAAGAAACGGCAAGATCTTCAT
59.702
40.000
4.57
0.00
33.81
2.57
3312
3463
4.876107
TCCATAAGAAACGGCAAGATCTTC
59.124
41.667
4.57
0.75
33.81
2.87
3370
3834
4.463539
TCAACTGCCACAAGATATTGCATT
59.536
37.500
0.00
0.00
0.00
3.56
3385
3849
1.168714
CTTGCCCTACTTCAACTGCC
58.831
55.000
0.00
0.00
0.00
4.85
3397
3861
3.386932
TTATCAATTCCAGCTTGCCCT
57.613
42.857
0.00
0.00
0.00
5.19
3416
3880
8.995027
TTGGCACAGAGGTATATCAATATTTT
57.005
30.769
0.00
0.00
42.39
1.82
3423
3887
5.104151
TCCATTTTGGCACAGAGGTATATCA
60.104
40.000
0.00
0.00
42.39
2.15
3440
3904
4.322953
GCTGGGACAACATCATTCCATTTT
60.323
41.667
0.00
0.00
38.70
1.82
3516
3980
5.862924
ACTGTGCATTGTGTGTAGATAAC
57.137
39.130
0.00
0.00
0.00
1.89
3523
3987
7.065803
GGATAACTATAACTGTGCATTGTGTGT
59.934
37.037
0.00
0.00
0.00
3.72
3542
4006
2.200081
AGACCATGCACCTGGATAACT
58.800
47.619
13.35
4.35
39.73
2.24
3567
4031
9.118300
AGGATCAATACAATGAATCTTCTCAAC
57.882
33.333
0.00
0.00
32.06
3.18
3575
4039
7.446319
TCCATGACAGGATCAATACAATGAATC
59.554
37.037
0.00
0.00
41.93
2.52
3609
4073
0.908198
GGCACAAGATCTCCCTCTGT
59.092
55.000
0.00
0.00
0.00
3.41
3614
4078
2.172293
AGATTGAGGCACAAGATCTCCC
59.828
50.000
3.33
0.00
42.02
4.30
3615
4079
3.204526
CAGATTGAGGCACAAGATCTCC
58.795
50.000
3.33
0.00
42.02
3.71
3616
4080
2.613133
GCAGATTGAGGCACAAGATCTC
59.387
50.000
3.33
0.00
42.02
2.75
3635
4099
7.884257
TCAATACATCTGAAAAACATCTTGCA
58.116
30.769
0.00
0.00
0.00
4.08
3648
4112
5.241403
ACCACCACTTTCAATACATCTGA
57.759
39.130
0.00
0.00
0.00
3.27
Based at the University of Bristol with support from BBSRC .
AutoCloner maintained by Alex Coulton.