Multiple sequence alignment - TraesCS7D01G306200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G306200 chr7D 100.000 6388 0 0 1 6388 387340869 387334482 0.000000e+00 11797.0
1 TraesCS7D01G306200 chr7D 96.739 92 3 0 39 130 183226455 183226546 3.080000e-33 154.0
2 TraesCS7D01G306200 chr7A 96.272 2897 66 13 583 3448 437410105 437407220 0.000000e+00 4713.0
3 TraesCS7D01G306200 chr7A 95.222 1214 43 5 3602 4808 437406792 437405587 0.000000e+00 1906.0
4 TraesCS7D01G306200 chr7A 96.000 1050 29 6 5094 6139 437405290 437404250 0.000000e+00 1694.0
5 TraesCS7D01G306200 chr7A 97.640 339 6 1 4810 5146 437405627 437405289 1.190000e-161 580.0
6 TraesCS7D01G306200 chr7A 93.200 250 16 1 6137 6385 437403940 437403691 3.640000e-97 366.0
7 TraesCS7D01G306200 chr7A 90.909 165 7 2 3441 3605 437407181 437407025 1.390000e-51 215.0
8 TraesCS7D01G306200 chr7A 95.652 46 2 0 3 48 657583275 657583320 2.470000e-09 75.0
9 TraesCS7D01G306200 chr7B 95.597 2839 73 22 845 3667 382334891 382332089 0.000000e+00 4503.0
10 TraesCS7D01G306200 chr7B 92.267 1513 62 14 4807 6313 382330838 382329375 0.000000e+00 2095.0
11 TraesCS7D01G306200 chr7B 95.542 1144 43 5 3668 4808 382331933 382330795 0.000000e+00 1823.0
12 TraesCS7D01G306200 chr7B 98.182 275 5 0 605 879 382335167 382334893 1.250000e-131 481.0
13 TraesCS7D01G306200 chr7B 93.013 229 15 1 126 353 57575925 57576153 3.690000e-87 333.0
14 TraesCS7D01G306200 chr7B 95.745 47 2 0 492 538 382340781 382340735 6.870000e-10 76.8
15 TraesCS7D01G306200 chr7B 100.000 35 0 0 522 556 382335203 382335169 1.490000e-06 65.8
16 TraesCS7D01G306200 chr2A 94.760 229 11 1 126 353 585984409 585984637 7.880000e-94 355.0
17 TraesCS7D01G306200 chr2A 93.886 229 13 1 126 353 686011631 686011859 1.710000e-90 344.0
18 TraesCS7D01G306200 chr2D 94.323 229 12 1 126 353 109741608 109741380 3.660000e-92 350.0
19 TraesCS7D01G306200 chr2D 93.043 230 15 1 126 354 557169895 557169666 1.030000e-87 335.0
20 TraesCS7D01G306200 chr2D 93.013 229 15 1 126 353 329144592 329144364 3.690000e-87 333.0
21 TraesCS7D01G306200 chr2D 86.154 260 28 7 5868 6125 172409405 172409658 2.270000e-69 274.0
22 TraesCS7D01G306200 chr2D 92.157 51 3 1 1 50 635101038 635100988 3.200000e-08 71.3
23 TraesCS7D01G306200 chr3D 94.977 219 10 1 126 343 498341046 498341264 6.130000e-90 342.0
24 TraesCS7D01G306200 chr3D 93.074 231 13 3 126 353 416480551 416480781 1.030000e-87 335.0
25 TraesCS7D01G306200 chr3D 96.739 92 3 0 39 130 58427380 58427471 3.080000e-33 154.0
26 TraesCS7D01G306200 chr3D 80.556 180 17 10 5880 6055 606081308 606081473 8.700000e-24 122.0
27 TraesCS7D01G306200 chr3D 100.000 41 0 0 1 41 48637368 48637328 6.870000e-10 76.8
28 TraesCS7D01G306200 chr5A 93.043 230 14 2 126 353 94291225 94290996 1.030000e-87 335.0
29 TraesCS7D01G306200 chr5A 85.537 242 29 5 5884 6122 697876089 697875851 1.380000e-61 248.0
30 TraesCS7D01G306200 chr5A 83.824 272 28 12 5880 6144 369631699 369631437 1.780000e-60 244.0
31 TraesCS7D01G306200 chr5A 79.167 264 47 5 5868 6125 531533114 531533375 6.580000e-40 176.0
32 TraesCS7D01G306200 chr5A 90.400 125 10 1 8 130 662540429 662540553 5.120000e-36 163.0
33 TraesCS7D01G306200 chr5A 96.739 92 3 0 39 130 92212693 92212602 3.080000e-33 154.0
34 TraesCS7D01G306200 chr4D 85.115 262 32 6 5868 6125 416060703 416060961 1.770000e-65 261.0
35 TraesCS7D01G306200 chr4D 96.739 92 3 0 39 130 25403688 25403597 3.080000e-33 154.0
36 TraesCS7D01G306200 chr5B 85.944 249 27 7 5868 6110 316713161 316713407 6.350000e-65 259.0
37 TraesCS7D01G306200 chr5B 84.674 261 31 6 5868 6125 327083533 327083787 1.060000e-62 252.0
38 TraesCS7D01G306200 chr5D 84.351 262 30 9 5868 6125 287823160 287823414 4.950000e-61 246.0
39 TraesCS7D01G306200 chr5D 96.739 92 3 0 39 130 462073392 462073483 3.080000e-33 154.0
40 TraesCS7D01G306200 chr5D 96.739 92 3 0 39 130 470549259 470549168 3.080000e-33 154.0
41 TraesCS7D01G306200 chr5D 87.324 71 5 4 406 473 474550597 474550528 1.910000e-10 78.7
42 TraesCS7D01G306200 chr5D 92.308 52 1 3 1 51 231608437 231608486 3.200000e-08 71.3
43 TraesCS7D01G306200 chr4B 88.780 205 15 8 5882 6083 328113457 328113258 1.780000e-60 244.0
44 TraesCS7D01G306200 chr4B 86.829 205 21 6 5868 6069 512757779 512757980 2.320000e-54 224.0
45 TraesCS7D01G306200 chr4B 97.802 91 2 0 39 129 596330914 596330824 2.380000e-34 158.0
46 TraesCS7D01G306200 chr4A 86.911 191 17 7 5882 6069 352273008 352273193 2.330000e-49 207.0
47 TraesCS7D01G306200 chr4A 95.745 47 2 0 1 47 89601963 89602009 6.870000e-10 76.8
48 TraesCS7D01G306200 chr6D 96.739 92 3 0 39 130 368732953 368732862 3.080000e-33 154.0
49 TraesCS7D01G306200 chr6B 79.051 253 31 16 5875 6125 19140927 19141159 3.080000e-33 154.0
50 TraesCS7D01G306200 chr6B 90.741 54 5 0 1 54 45842001 45841948 8.880000e-09 73.1
51 TraesCS7D01G306200 chr6B 93.878 49 2 1 1 49 632304615 632304662 8.880000e-09 73.1
52 TraesCS7D01G306200 chr1D 94.000 50 1 2 1 49 485912272 485912224 2.470000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G306200 chr7D 387334482 387340869 6387 True 11797.00 11797 100.000000 1 6388 1 chr7D.!!$R1 6387
1 TraesCS7D01G306200 chr7A 437403691 437410105 6414 True 1579.00 4713 94.873833 583 6385 6 chr7A.!!$R1 5802
2 TraesCS7D01G306200 chr7B 382329375 382335203 5828 True 1793.56 4503 96.317600 522 6313 5 chr7B.!!$R2 5791

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
496 497 0.032130 AACTCTCATGTCACGTGCGT 59.968 50.000 11.67 4.71 0.00 5.24 F
561 562 0.035598 TTTCGAAACGAGGGGCATGA 59.964 50.000 6.47 0.00 37.14 3.07 F
564 565 0.174845 CGAAACGAGGGGCATGACTA 59.825 55.000 0.00 0.00 0.00 2.59 F
578 579 0.384309 TGACTATGGATGGACGCGTC 59.616 55.000 30.67 30.67 0.00 5.19 F
1925 1968 1.324383 CAGCCTGATGCCATATTGCA 58.676 50.000 3.65 3.65 46.94 4.08 F
2280 2331 5.833406 TTGTGTGATTGTTCATCAACACT 57.167 34.783 13.67 0.00 43.93 3.55 F
4146 4644 0.750850 TGCCCTTACTGCGTATCTCC 59.249 55.000 0.00 0.00 0.00 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1624 1663 1.228737 GCCTGGGGTTAAGGTGCAA 60.229 57.895 0.00 0.00 37.13 4.08 R
2382 2437 1.336755 ACACTTGCCGGAACATGAAAC 59.663 47.619 5.05 0.00 0.00 2.78 R
2389 2444 2.863401 AAAAGAACACTTGCCGGAAC 57.137 45.000 5.05 0.00 0.00 3.62 R
2796 2852 5.995055 CATGAAGTTGTCTTGGACTCTTTC 58.005 41.667 0.00 1.99 33.64 2.62 R
3717 4215 2.091541 CGTTGGGTGCATCTGGTTAAT 58.908 47.619 0.00 0.00 0.00 1.40 R
4387 4890 2.287788 GCAAGGTGACATGACAAACAGG 60.288 50.000 0.00 0.00 36.29 4.00 R
6293 7169 1.001520 GCCCTTATTGCGGTGGTTTTT 59.998 47.619 0.00 0.00 0.00 1.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 2.048597 CAACGCACGGGCACTCTA 60.049 61.111 11.77 0.00 41.24 2.43
32 33 2.048503 AACGCACGGGCACTCTAC 60.049 61.111 11.77 0.00 41.24 2.59
33 34 2.571216 AACGCACGGGCACTCTACT 61.571 57.895 11.77 0.00 41.24 2.57
34 35 1.246056 AACGCACGGGCACTCTACTA 61.246 55.000 11.77 0.00 41.24 1.82
35 36 1.064296 CGCACGGGCACTCTACTAG 59.936 63.158 11.77 0.00 41.24 2.57
36 37 1.654954 CGCACGGGCACTCTACTAGT 61.655 60.000 11.77 0.00 41.24 2.57
37 38 0.100861 GCACGGGCACTCTACTAGTC 59.899 60.000 3.77 0.00 40.72 2.59
38 39 1.460504 CACGGGCACTCTACTAGTCA 58.539 55.000 0.00 0.00 35.76 3.41
39 40 2.025155 CACGGGCACTCTACTAGTCAT 58.975 52.381 0.00 0.00 35.76 3.06
40 41 2.033550 CACGGGCACTCTACTAGTCATC 59.966 54.545 0.00 0.00 35.76 2.92
41 42 1.264557 CGGGCACTCTACTAGTCATCG 59.735 57.143 0.00 0.00 35.76 3.84
42 43 2.299521 GGGCACTCTACTAGTCATCGT 58.700 52.381 0.00 0.00 35.76 3.73
43 44 3.474600 GGGCACTCTACTAGTCATCGTA 58.525 50.000 0.00 0.00 35.76 3.43
44 45 3.499157 GGGCACTCTACTAGTCATCGTAG 59.501 52.174 0.00 0.00 35.76 3.51
45 46 4.378774 GGCACTCTACTAGTCATCGTAGA 58.621 47.826 0.00 0.00 39.65 2.59
46 47 4.815308 GGCACTCTACTAGTCATCGTAGAA 59.185 45.833 0.00 0.00 40.92 2.10
47 48 5.049954 GGCACTCTACTAGTCATCGTAGAAG 60.050 48.000 0.00 0.00 40.92 2.85
48 49 5.754406 GCACTCTACTAGTCATCGTAGAAGA 59.246 44.000 0.00 0.00 40.92 2.87
49 50 6.073980 GCACTCTACTAGTCATCGTAGAAGAG 60.074 46.154 0.00 5.31 40.92 2.85
50 51 6.422701 CACTCTACTAGTCATCGTAGAAGAGG 59.577 46.154 14.79 4.19 40.92 3.69
51 52 6.324512 ACTCTACTAGTCATCGTAGAAGAGGA 59.675 42.308 14.79 0.00 40.92 3.71
52 53 7.122138 TCTACTAGTCATCGTAGAAGAGGAA 57.878 40.000 0.00 0.00 43.58 3.36
53 54 6.985645 TCTACTAGTCATCGTAGAAGAGGAAC 59.014 42.308 0.00 0.00 43.58 3.62
54 55 4.571580 ACTAGTCATCGTAGAAGAGGAACG 59.428 45.833 0.00 0.00 43.58 3.95
55 56 2.097791 AGTCATCGTAGAAGAGGAACGC 59.902 50.000 0.00 0.00 43.58 4.84
56 57 1.404391 TCATCGTAGAAGAGGAACGCC 59.596 52.381 0.00 0.00 43.58 5.68
57 58 0.745468 ATCGTAGAAGAGGAACGCCC 59.255 55.000 0.00 0.00 43.58 6.13
58 59 1.226603 CGTAGAAGAGGAACGCCCG 60.227 63.158 0.00 0.00 40.87 6.13
59 60 1.141234 GTAGAAGAGGAACGCCCGG 59.859 63.158 0.00 0.00 40.87 5.73
60 61 1.000521 TAGAAGAGGAACGCCCGGA 60.001 57.895 0.73 0.00 40.87 5.14
61 62 0.612732 TAGAAGAGGAACGCCCGGAA 60.613 55.000 0.73 0.00 40.87 4.30
62 63 1.740664 GAAGAGGAACGCCCGGAAC 60.741 63.158 0.73 0.00 40.87 3.62
84 85 3.921677 GTCTGTACGATCAAGGGTTTCA 58.078 45.455 0.00 0.00 0.00 2.69
85 86 3.927142 GTCTGTACGATCAAGGGTTTCAG 59.073 47.826 0.00 0.00 0.00 3.02
86 87 3.576982 TCTGTACGATCAAGGGTTTCAGT 59.423 43.478 0.00 0.00 0.00 3.41
87 88 4.039973 TCTGTACGATCAAGGGTTTCAGTT 59.960 41.667 0.00 0.00 0.00 3.16
88 89 4.710324 TGTACGATCAAGGGTTTCAGTTT 58.290 39.130 0.00 0.00 0.00 2.66
89 90 4.753107 TGTACGATCAAGGGTTTCAGTTTC 59.247 41.667 0.00 0.00 0.00 2.78
90 91 3.815809 ACGATCAAGGGTTTCAGTTTCA 58.184 40.909 0.00 0.00 0.00 2.69
91 92 4.204012 ACGATCAAGGGTTTCAGTTTCAA 58.796 39.130 0.00 0.00 0.00 2.69
92 93 4.275936 ACGATCAAGGGTTTCAGTTTCAAG 59.724 41.667 0.00 0.00 0.00 3.02
93 94 4.320494 CGATCAAGGGTTTCAGTTTCAAGG 60.320 45.833 0.00 0.00 0.00 3.61
94 95 3.976015 TCAAGGGTTTCAGTTTCAAGGT 58.024 40.909 0.00 0.00 0.00 3.50
95 96 3.699038 TCAAGGGTTTCAGTTTCAAGGTG 59.301 43.478 0.00 0.00 0.00 4.00
96 97 3.662759 AGGGTTTCAGTTTCAAGGTGA 57.337 42.857 0.00 0.00 0.00 4.02
97 98 3.555966 AGGGTTTCAGTTTCAAGGTGAG 58.444 45.455 0.00 0.00 0.00 3.51
98 99 3.202151 AGGGTTTCAGTTTCAAGGTGAGA 59.798 43.478 0.00 0.00 0.00 3.27
99 100 3.951680 GGGTTTCAGTTTCAAGGTGAGAA 59.048 43.478 0.00 0.00 0.00 2.87
100 101 4.584743 GGGTTTCAGTTTCAAGGTGAGAAT 59.415 41.667 0.00 0.00 0.00 2.40
101 102 5.507985 GGGTTTCAGTTTCAAGGTGAGAATG 60.508 44.000 0.00 0.00 29.36 2.67
102 103 5.067805 GGTTTCAGTTTCAAGGTGAGAATGT 59.932 40.000 0.00 0.00 30.14 2.71
103 104 6.405842 GGTTTCAGTTTCAAGGTGAGAATGTT 60.406 38.462 0.00 0.00 30.14 2.71
104 105 5.756195 TCAGTTTCAAGGTGAGAATGTTG 57.244 39.130 0.00 0.00 30.14 3.33
105 106 5.192927 TCAGTTTCAAGGTGAGAATGTTGT 58.807 37.500 0.00 0.00 30.14 3.32
106 107 5.066375 TCAGTTTCAAGGTGAGAATGTTGTG 59.934 40.000 0.00 0.00 30.14 3.33
107 108 3.988379 TTCAAGGTGAGAATGTTGTGC 57.012 42.857 0.00 0.00 0.00 4.57
108 109 2.229792 TCAAGGTGAGAATGTTGTGCC 58.770 47.619 0.00 0.00 0.00 5.01
109 110 2.158623 TCAAGGTGAGAATGTTGTGCCT 60.159 45.455 0.00 0.00 0.00 4.75
110 111 1.901591 AGGTGAGAATGTTGTGCCTG 58.098 50.000 0.00 0.00 0.00 4.85
111 112 1.421268 AGGTGAGAATGTTGTGCCTGA 59.579 47.619 0.00 0.00 0.00 3.86
112 113 1.808945 GGTGAGAATGTTGTGCCTGAG 59.191 52.381 0.00 0.00 0.00 3.35
113 114 1.198637 GTGAGAATGTTGTGCCTGAGC 59.801 52.381 0.00 0.00 40.48 4.26
122 123 3.317109 TGCCTGAGCATGGAGGAG 58.683 61.111 0.00 0.00 46.52 3.69
123 124 2.203181 GCCTGAGCATGGAGGAGC 60.203 66.667 0.00 0.00 39.53 4.70
124 125 2.108566 CCTGAGCATGGAGGAGCG 59.891 66.667 0.00 0.00 35.48 5.03
125 126 2.108566 CTGAGCATGGAGGAGCGG 59.891 66.667 0.00 0.00 35.48 5.52
126 127 4.166888 TGAGCATGGAGGAGCGGC 62.167 66.667 0.00 0.00 35.48 6.53
127 128 4.166888 GAGCATGGAGGAGCGGCA 62.167 66.667 1.45 0.00 35.48 5.69
128 129 3.687321 GAGCATGGAGGAGCGGCAA 62.687 63.158 1.45 0.00 35.48 4.52
129 130 3.512516 GCATGGAGGAGCGGCAAC 61.513 66.667 1.45 0.00 0.00 4.17
130 131 2.270205 CATGGAGGAGCGGCAACT 59.730 61.111 1.45 0.00 0.00 3.16
131 132 2.110967 CATGGAGGAGCGGCAACTG 61.111 63.158 1.45 0.00 0.00 3.16
132 133 3.984193 ATGGAGGAGCGGCAACTGC 62.984 63.158 1.45 5.61 41.14 4.40
133 134 4.704833 GGAGGAGCGGCAACTGCA 62.705 66.667 1.45 0.00 44.36 4.41
134 135 2.669569 GAGGAGCGGCAACTGCAA 60.670 61.111 1.45 0.00 44.36 4.08
135 136 2.203337 AGGAGCGGCAACTGCAAA 60.203 55.556 1.45 0.00 44.36 3.68
136 137 1.795170 GAGGAGCGGCAACTGCAAAA 61.795 55.000 1.45 0.00 44.36 2.44
137 138 1.181098 AGGAGCGGCAACTGCAAAAT 61.181 50.000 1.45 0.00 44.36 1.82
138 139 1.010419 GGAGCGGCAACTGCAAAATG 61.010 55.000 1.45 0.00 44.36 2.32
139 140 0.039256 GAGCGGCAACTGCAAAATGA 60.039 50.000 1.45 0.00 44.36 2.57
140 141 0.604578 AGCGGCAACTGCAAAATGAT 59.395 45.000 1.45 0.00 44.36 2.45
141 142 1.001181 AGCGGCAACTGCAAAATGATT 59.999 42.857 1.45 0.00 44.36 2.57
142 143 1.799994 GCGGCAACTGCAAAATGATTT 59.200 42.857 3.76 0.00 44.36 2.17
144 145 2.158058 CGGCAACTGCAAAATGATTTGG 59.842 45.455 3.76 0.00 44.93 3.28
145 146 3.140623 GGCAACTGCAAAATGATTTGGT 58.859 40.909 3.76 0.00 44.93 3.67
146 147 3.565063 GGCAACTGCAAAATGATTTGGTT 59.435 39.130 3.76 0.00 44.93 3.67
147 148 4.529446 GCAACTGCAAAATGATTTGGTTG 58.471 39.130 15.28 15.28 44.93 3.77
148 149 4.272991 GCAACTGCAAAATGATTTGGTTGA 59.727 37.500 19.87 0.00 43.67 3.18
149 150 5.559417 GCAACTGCAAAATGATTTGGTTGAG 60.559 40.000 19.87 7.85 43.67 3.02
150 151 4.060205 ACTGCAAAATGATTTGGTTGAGC 58.940 39.130 0.00 0.00 44.93 4.26
151 152 4.059511 CTGCAAAATGATTTGGTTGAGCA 58.940 39.130 0.00 0.00 44.93 4.26
152 153 4.643463 TGCAAAATGATTTGGTTGAGCAT 58.357 34.783 0.00 0.00 44.93 3.79
153 154 5.791666 TGCAAAATGATTTGGTTGAGCATA 58.208 33.333 0.00 0.00 44.93 3.14
154 155 6.408035 TGCAAAATGATTTGGTTGAGCATAT 58.592 32.000 0.00 0.00 44.93 1.78
155 156 6.314152 TGCAAAATGATTTGGTTGAGCATATG 59.686 34.615 0.00 0.00 44.93 1.78
156 157 6.314400 GCAAAATGATTTGGTTGAGCATATGT 59.686 34.615 4.29 0.00 44.93 2.29
157 158 7.675403 GCAAAATGATTTGGTTGAGCATATGTG 60.675 37.037 4.29 0.00 44.93 3.21
158 159 4.987408 TGATTTGGTTGAGCATATGTGG 57.013 40.909 4.29 0.00 0.00 4.17
159 160 3.700539 TGATTTGGTTGAGCATATGTGGG 59.299 43.478 4.29 0.00 0.00 4.61
160 161 1.473258 TTGGTTGAGCATATGTGGGC 58.527 50.000 4.29 0.00 0.00 5.36
161 162 0.625316 TGGTTGAGCATATGTGGGCT 59.375 50.000 4.29 0.00 44.48 5.19
167 168 2.742428 AGCATATGTGGGCTCATGTT 57.258 45.000 4.29 0.00 34.76 2.71
168 169 2.304092 AGCATATGTGGGCTCATGTTG 58.696 47.619 4.29 0.00 34.76 3.33
169 170 1.338973 GCATATGTGGGCTCATGTTGG 59.661 52.381 4.29 0.00 0.00 3.77
170 171 1.338973 CATATGTGGGCTCATGTTGGC 59.661 52.381 0.00 0.00 0.00 4.52
171 172 0.330941 TATGTGGGCTCATGTTGGCA 59.669 50.000 14.32 0.00 0.00 4.92
172 173 0.542467 ATGTGGGCTCATGTTGGCAA 60.542 50.000 14.32 0.00 0.00 4.52
173 174 1.290009 GTGGGCTCATGTTGGCAAC 59.710 57.895 23.12 23.12 0.00 4.17
174 175 1.907807 TGGGCTCATGTTGGCAACC 60.908 57.895 26.31 10.64 0.00 3.77
175 176 1.907807 GGGCTCATGTTGGCAACCA 60.908 57.895 26.31 15.17 0.00 3.67
176 177 1.470996 GGGCTCATGTTGGCAACCAA 61.471 55.000 26.31 10.36 41.69 3.67
184 185 2.818111 TTGGCAACCAACAGATGCA 58.182 47.368 0.00 0.00 38.75 3.96
185 186 1.340088 TTGGCAACCAACAGATGCAT 58.660 45.000 0.00 0.00 38.75 3.96
186 187 0.889994 TGGCAACCAACAGATGCATC 59.110 50.000 19.37 19.37 41.80 3.91
187 188 1.180029 GGCAACCAACAGATGCATCT 58.820 50.000 23.75 23.75 41.80 2.90
188 189 1.547372 GGCAACCAACAGATGCATCTT 59.453 47.619 26.70 14.90 41.80 2.40
189 190 2.416431 GGCAACCAACAGATGCATCTTC 60.416 50.000 26.70 1.35 41.80 2.87
190 191 2.490903 GCAACCAACAGATGCATCTTCT 59.509 45.455 26.70 13.57 39.81 2.85
191 192 3.057033 GCAACCAACAGATGCATCTTCTT 60.057 43.478 26.70 17.07 39.81 2.52
192 193 4.560108 GCAACCAACAGATGCATCTTCTTT 60.560 41.667 26.70 16.32 39.81 2.52
193 194 5.335897 GCAACCAACAGATGCATCTTCTTTA 60.336 40.000 26.70 0.00 39.81 1.85
194 195 6.626623 GCAACCAACAGATGCATCTTCTTTAT 60.627 38.462 26.70 9.44 39.81 1.40
195 196 7.318141 CAACCAACAGATGCATCTTCTTTATT 58.682 34.615 26.70 13.53 34.22 1.40
196 197 7.093322 ACCAACAGATGCATCTTCTTTATTC 57.907 36.000 26.70 0.00 34.22 1.75
197 198 6.183360 ACCAACAGATGCATCTTCTTTATTCG 60.183 38.462 26.70 14.05 34.22 3.34
198 199 5.998454 ACAGATGCATCTTCTTTATTCGG 57.002 39.130 26.70 13.35 34.22 4.30
199 200 4.274459 ACAGATGCATCTTCTTTATTCGGC 59.726 41.667 26.70 0.00 34.22 5.54
200 201 4.514441 CAGATGCATCTTCTTTATTCGGCT 59.486 41.667 26.70 0.00 34.22 5.52
201 202 5.008415 CAGATGCATCTTCTTTATTCGGCTT 59.992 40.000 26.70 0.00 34.22 4.35
202 203 4.621068 TGCATCTTCTTTATTCGGCTTG 57.379 40.909 0.00 0.00 0.00 4.01
203 204 3.181497 TGCATCTTCTTTATTCGGCTTGC 60.181 43.478 0.00 0.00 0.00 4.01
204 205 3.181497 GCATCTTCTTTATTCGGCTTGCA 60.181 43.478 0.00 0.00 0.00 4.08
205 206 4.675146 GCATCTTCTTTATTCGGCTTGCAA 60.675 41.667 0.00 0.00 0.00 4.08
206 207 5.401550 CATCTTCTTTATTCGGCTTGCAAA 58.598 37.500 0.00 0.00 0.00 3.68
207 208 5.446143 TCTTCTTTATTCGGCTTGCAAAA 57.554 34.783 0.00 0.00 0.00 2.44
208 209 5.219633 TCTTCTTTATTCGGCTTGCAAAAC 58.780 37.500 0.00 0.00 0.00 2.43
209 210 4.846779 TCTTTATTCGGCTTGCAAAACT 57.153 36.364 0.00 0.00 0.00 2.66
210 211 5.950758 TCTTTATTCGGCTTGCAAAACTA 57.049 34.783 0.00 0.00 0.00 2.24
211 212 6.509418 TCTTTATTCGGCTTGCAAAACTAT 57.491 33.333 0.00 0.00 0.00 2.12
212 213 6.321717 TCTTTATTCGGCTTGCAAAACTATG 58.678 36.000 0.00 0.00 0.00 2.23
213 214 5.637006 TTATTCGGCTTGCAAAACTATGT 57.363 34.783 0.00 0.00 0.00 2.29
214 215 2.987413 TCGGCTTGCAAAACTATGTG 57.013 45.000 0.00 0.00 0.00 3.21
215 216 2.499197 TCGGCTTGCAAAACTATGTGA 58.501 42.857 0.00 0.00 0.00 3.58
216 217 2.483877 TCGGCTTGCAAAACTATGTGAG 59.516 45.455 0.00 0.00 0.00 3.51
217 218 2.483877 CGGCTTGCAAAACTATGTGAGA 59.516 45.455 0.00 0.00 0.00 3.27
218 219 3.667960 CGGCTTGCAAAACTATGTGAGAC 60.668 47.826 0.00 0.00 0.00 3.36
219 220 3.253188 GGCTTGCAAAACTATGTGAGACA 59.747 43.478 0.00 0.00 0.00 3.41
220 221 4.082571 GGCTTGCAAAACTATGTGAGACAT 60.083 41.667 0.00 0.00 42.35 3.06
221 222 5.464168 GCTTGCAAAACTATGTGAGACATT 58.536 37.500 0.00 0.00 39.88 2.71
222 223 5.922544 GCTTGCAAAACTATGTGAGACATTT 59.077 36.000 0.00 0.00 39.88 2.32
223 224 6.421801 GCTTGCAAAACTATGTGAGACATTTT 59.578 34.615 0.00 0.00 39.88 1.82
224 225 7.042523 GCTTGCAAAACTATGTGAGACATTTTT 60.043 33.333 0.00 0.00 39.88 1.94
225 226 9.462174 CTTGCAAAACTATGTGAGACATTTTTA 57.538 29.630 0.00 0.00 39.88 1.52
226 227 8.795786 TGCAAAACTATGTGAGACATTTTTAC 57.204 30.769 0.00 0.00 39.88 2.01
227 228 8.629158 TGCAAAACTATGTGAGACATTTTTACT 58.371 29.630 0.00 0.00 39.88 2.24
228 229 9.463443 GCAAAACTATGTGAGACATTTTTACTT 57.537 29.630 0.00 0.00 39.88 2.24
236 237 9.840427 ATGTGAGACATTTTTACTTTTATTCGG 57.160 29.630 0.00 0.00 34.67 4.30
237 238 8.842280 TGTGAGACATTTTTACTTTTATTCGGT 58.158 29.630 0.00 0.00 0.00 4.69
238 239 9.673454 GTGAGACATTTTTACTTTTATTCGGTT 57.327 29.630 0.00 0.00 0.00 4.44
251 252 9.401873 ACTTTTATTCGGTTTGTAAAACTATGC 57.598 29.630 3.14 0.00 0.00 3.14
252 253 9.620660 CTTTTATTCGGTTTGTAAAACTATGCT 57.379 29.630 3.14 0.00 0.00 3.79
304 305 9.979578 TTTGACTATATGTTTCAATGCAAAAGT 57.020 25.926 0.00 0.00 0.00 2.66
305 306 9.979578 TTGACTATATGTTTCAATGCAAAAGTT 57.020 25.926 0.00 0.00 0.00 2.66
306 307 9.409312 TGACTATATGTTTCAATGCAAAAGTTG 57.591 29.630 0.00 0.00 0.00 3.16
307 308 9.410556 GACTATATGTTTCAATGCAAAAGTTGT 57.589 29.630 0.00 0.00 0.00 3.32
308 309 9.195411 ACTATATGTTTCAATGCAAAAGTTGTG 57.805 29.630 0.00 0.00 0.00 3.33
309 310 9.195411 CTATATGTTTCAATGCAAAAGTTGTGT 57.805 29.630 0.00 0.00 0.00 3.72
310 311 5.527511 TGTTTCAATGCAAAAGTTGTGTG 57.472 34.783 0.00 0.00 0.00 3.82
311 312 4.993584 TGTTTCAATGCAAAAGTTGTGTGT 59.006 33.333 0.00 0.00 0.00 3.72
312 313 5.107182 TGTTTCAATGCAAAAGTTGTGTGTG 60.107 36.000 0.00 0.00 0.00 3.82
313 314 4.446994 TCAATGCAAAAGTTGTGTGTGA 57.553 36.364 0.00 0.00 0.00 3.58
314 315 4.814147 TCAATGCAAAAGTTGTGTGTGAA 58.186 34.783 0.00 0.00 0.00 3.18
315 316 5.233225 TCAATGCAAAAGTTGTGTGTGAAA 58.767 33.333 0.00 0.00 0.00 2.69
316 317 5.119898 TCAATGCAAAAGTTGTGTGTGAAAC 59.880 36.000 0.00 0.00 37.35 2.78
350 351 8.525290 AATGACTATTTCTTGAAATAGGGTGG 57.475 34.615 30.41 16.67 43.56 4.61
351 352 5.885912 TGACTATTTCTTGAAATAGGGTGGC 59.114 40.000 30.41 20.11 43.56 5.01
352 353 5.201243 ACTATTTCTTGAAATAGGGTGGCC 58.799 41.667 30.41 0.00 43.56 5.36
353 354 3.825908 TTTCTTGAAATAGGGTGGCCT 57.174 42.857 3.32 0.00 0.00 5.19
354 355 3.366052 TTCTTGAAATAGGGTGGCCTC 57.634 47.619 3.32 0.00 0.00 4.70
355 356 1.209504 TCTTGAAATAGGGTGGCCTCG 59.790 52.381 3.32 0.00 0.00 4.63
356 357 0.988832 TTGAAATAGGGTGGCCTCGT 59.011 50.000 3.32 0.28 0.00 4.18
357 358 0.251916 TGAAATAGGGTGGCCTCGTG 59.748 55.000 3.32 0.00 0.00 4.35
358 359 0.252197 GAAATAGGGTGGCCTCGTGT 59.748 55.000 3.32 0.00 0.00 4.49
359 360 0.696501 AAATAGGGTGGCCTCGTGTT 59.303 50.000 3.32 0.00 0.00 3.32
360 361 1.575419 AATAGGGTGGCCTCGTGTTA 58.425 50.000 3.32 0.00 0.00 2.41
361 362 1.120530 ATAGGGTGGCCTCGTGTTAG 58.879 55.000 3.32 0.00 0.00 2.34
362 363 0.040058 TAGGGTGGCCTCGTGTTAGA 59.960 55.000 3.32 0.00 0.00 2.10
363 364 1.079336 GGGTGGCCTCGTGTTAGAC 60.079 63.158 3.32 0.00 0.00 2.59
364 365 1.669440 GGTGGCCTCGTGTTAGACA 59.331 57.895 3.32 0.00 0.00 3.41
365 366 0.669625 GGTGGCCTCGTGTTAGACAC 60.670 60.000 3.32 1.21 45.26 3.67
376 377 1.888512 TGTTAGACACACTACCGACCC 59.111 52.381 0.00 0.00 0.00 4.46
377 378 1.888512 GTTAGACACACTACCGACCCA 59.111 52.381 0.00 0.00 0.00 4.51
378 379 2.291209 TAGACACACTACCGACCCAA 57.709 50.000 0.00 0.00 0.00 4.12
379 380 1.416243 AGACACACTACCGACCCAAA 58.584 50.000 0.00 0.00 0.00 3.28
380 381 1.975680 AGACACACTACCGACCCAAAT 59.024 47.619 0.00 0.00 0.00 2.32
381 382 3.167485 AGACACACTACCGACCCAAATA 58.833 45.455 0.00 0.00 0.00 1.40
382 383 3.056322 AGACACACTACCGACCCAAATAC 60.056 47.826 0.00 0.00 0.00 1.89
383 384 2.633967 ACACACTACCGACCCAAATACA 59.366 45.455 0.00 0.00 0.00 2.29
384 385 3.071312 ACACACTACCGACCCAAATACAA 59.929 43.478 0.00 0.00 0.00 2.41
385 386 4.066490 CACACTACCGACCCAAATACAAA 58.934 43.478 0.00 0.00 0.00 2.83
386 387 4.515944 CACACTACCGACCCAAATACAAAA 59.484 41.667 0.00 0.00 0.00 2.44
387 388 4.516321 ACACTACCGACCCAAATACAAAAC 59.484 41.667 0.00 0.00 0.00 2.43
388 389 4.515944 CACTACCGACCCAAATACAAAACA 59.484 41.667 0.00 0.00 0.00 2.83
389 390 4.758165 ACTACCGACCCAAATACAAAACAG 59.242 41.667 0.00 0.00 0.00 3.16
390 391 3.822940 ACCGACCCAAATACAAAACAGA 58.177 40.909 0.00 0.00 0.00 3.41
391 392 4.208746 ACCGACCCAAATACAAAACAGAA 58.791 39.130 0.00 0.00 0.00 3.02
392 393 4.037089 ACCGACCCAAATACAAAACAGAAC 59.963 41.667 0.00 0.00 0.00 3.01
393 394 4.215965 CGACCCAAATACAAAACAGAACG 58.784 43.478 0.00 0.00 0.00 3.95
394 395 4.542735 GACCCAAATACAAAACAGAACGG 58.457 43.478 0.00 0.00 0.00 4.44
395 396 4.208746 ACCCAAATACAAAACAGAACGGA 58.791 39.130 0.00 0.00 0.00 4.69
396 397 4.830600 ACCCAAATACAAAACAGAACGGAT 59.169 37.500 0.00 0.00 0.00 4.18
397 398 5.160641 CCCAAATACAAAACAGAACGGATG 58.839 41.667 0.00 0.00 0.00 3.51
398 399 4.621034 CCAAATACAAAACAGAACGGATGC 59.379 41.667 0.00 0.00 0.00 3.91
399 400 4.434713 AATACAAAACAGAACGGATGCC 57.565 40.909 0.00 0.00 0.00 4.40
423 424 4.992511 CCGGCCGACCCAAACGAA 62.993 66.667 30.73 0.00 0.00 3.85
424 425 3.719144 CGGCCGACCCAAACGAAC 61.719 66.667 24.07 0.00 0.00 3.95
425 426 2.592287 GGCCGACCCAAACGAACA 60.592 61.111 0.00 0.00 0.00 3.18
426 427 2.188161 GGCCGACCCAAACGAACAA 61.188 57.895 0.00 0.00 0.00 2.83
427 428 1.726533 GGCCGACCCAAACGAACAAA 61.727 55.000 0.00 0.00 0.00 2.83
428 429 0.100861 GCCGACCCAAACGAACAAAA 59.899 50.000 0.00 0.00 0.00 2.44
429 430 1.469423 GCCGACCCAAACGAACAAAAA 60.469 47.619 0.00 0.00 0.00 1.94
448 449 5.952526 AAAAAGATAAAATGACCGTCCGT 57.047 34.783 0.00 0.00 0.00 4.69
449 450 5.952526 AAAAGATAAAATGACCGTCCGTT 57.047 34.783 0.00 0.00 0.00 4.44
450 451 5.952526 AAAGATAAAATGACCGTCCGTTT 57.047 34.783 0.00 0.00 0.00 3.60
451 452 4.939509 AGATAAAATGACCGTCCGTTTG 57.060 40.909 0.00 0.00 0.00 2.93
452 453 4.571919 AGATAAAATGACCGTCCGTTTGA 58.428 39.130 0.00 0.00 0.00 2.69
453 454 4.998672 AGATAAAATGACCGTCCGTTTGAA 59.001 37.500 0.00 0.00 0.00 2.69
454 455 5.646360 AGATAAAATGACCGTCCGTTTGAAT 59.354 36.000 0.00 0.00 0.00 2.57
455 456 3.824414 AAATGACCGTCCGTTTGAATC 57.176 42.857 0.00 0.00 0.00 2.52
456 457 1.734163 ATGACCGTCCGTTTGAATCC 58.266 50.000 0.00 0.00 0.00 3.01
457 458 0.320946 TGACCGTCCGTTTGAATCCC 60.321 55.000 0.00 0.00 0.00 3.85
458 459 1.002990 ACCGTCCGTTTGAATCCCC 60.003 57.895 0.00 0.00 0.00 4.81
459 460 1.298667 CCGTCCGTTTGAATCCCCT 59.701 57.895 0.00 0.00 0.00 4.79
460 461 1.024579 CCGTCCGTTTGAATCCCCTG 61.025 60.000 0.00 0.00 0.00 4.45
461 462 0.321298 CGTCCGTTTGAATCCCCTGT 60.321 55.000 0.00 0.00 0.00 4.00
462 463 1.880646 CGTCCGTTTGAATCCCCTGTT 60.881 52.381 0.00 0.00 0.00 3.16
463 464 1.539827 GTCCGTTTGAATCCCCTGTTG 59.460 52.381 0.00 0.00 0.00 3.33
464 465 0.887933 CCGTTTGAATCCCCTGTTGG 59.112 55.000 0.00 0.00 0.00 3.77
465 466 1.546773 CCGTTTGAATCCCCTGTTGGA 60.547 52.381 0.00 0.00 39.18 3.53
466 467 1.812571 CGTTTGAATCCCCTGTTGGAG 59.187 52.381 0.00 0.00 37.96 3.86
467 468 2.814097 CGTTTGAATCCCCTGTTGGAGT 60.814 50.000 0.00 0.00 37.96 3.85
468 469 3.230976 GTTTGAATCCCCTGTTGGAGTT 58.769 45.455 0.00 0.00 37.96 3.01
469 470 2.584835 TGAATCCCCTGTTGGAGTTG 57.415 50.000 0.00 0.00 37.96 3.16
470 471 1.177401 GAATCCCCTGTTGGAGTTGC 58.823 55.000 0.00 0.00 37.96 4.17
471 472 0.779997 AATCCCCTGTTGGAGTTGCT 59.220 50.000 0.00 0.00 37.96 3.91
472 473 0.329596 ATCCCCTGTTGGAGTTGCTC 59.670 55.000 0.00 0.00 37.96 4.26
484 485 3.393089 GAGTTGCTCCAAGAACTCTCA 57.607 47.619 0.00 0.00 43.18 3.27
485 486 3.936564 GAGTTGCTCCAAGAACTCTCAT 58.063 45.455 0.00 0.00 43.18 2.90
486 487 3.672808 AGTTGCTCCAAGAACTCTCATG 58.327 45.455 0.00 0.00 0.00 3.07
487 488 3.072184 AGTTGCTCCAAGAACTCTCATGT 59.928 43.478 0.00 0.00 0.00 3.21
488 489 3.325293 TGCTCCAAGAACTCTCATGTC 57.675 47.619 0.00 0.00 0.00 3.06
489 490 2.634453 TGCTCCAAGAACTCTCATGTCA 59.366 45.455 0.00 0.00 0.00 3.58
490 491 2.999355 GCTCCAAGAACTCTCATGTCAC 59.001 50.000 0.00 0.00 0.00 3.67
491 492 3.249091 CTCCAAGAACTCTCATGTCACG 58.751 50.000 0.00 0.00 0.00 4.35
492 493 2.628178 TCCAAGAACTCTCATGTCACGT 59.372 45.455 0.00 0.00 0.00 4.49
493 494 2.733552 CCAAGAACTCTCATGTCACGTG 59.266 50.000 9.94 9.94 0.00 4.49
494 495 2.071688 AGAACTCTCATGTCACGTGC 57.928 50.000 11.67 6.86 0.00 5.34
495 496 0.710567 GAACTCTCATGTCACGTGCG 59.289 55.000 11.67 0.00 0.00 5.34
496 497 0.032130 AACTCTCATGTCACGTGCGT 59.968 50.000 11.67 4.71 0.00 5.24
497 498 0.387367 ACTCTCATGTCACGTGCGTC 60.387 55.000 11.67 4.50 0.00 5.19
498 499 1.398762 CTCTCATGTCACGTGCGTCG 61.399 60.000 11.67 0.00 46.00 5.12
499 500 1.442017 CTCATGTCACGTGCGTCGA 60.442 57.895 11.67 4.08 42.86 4.20
500 501 0.798389 CTCATGTCACGTGCGTCGAT 60.798 55.000 11.67 0.00 42.86 3.59
501 502 1.070471 TCATGTCACGTGCGTCGATG 61.070 55.000 11.67 8.03 42.86 3.84
502 503 1.070471 CATGTCACGTGCGTCGATGA 61.070 55.000 11.67 0.00 42.86 2.92
503 504 0.388006 ATGTCACGTGCGTCGATGAA 60.388 50.000 11.67 0.00 42.86 2.57
504 505 1.272784 TGTCACGTGCGTCGATGAAC 61.273 55.000 11.67 7.35 42.86 3.18
505 506 1.002250 GTCACGTGCGTCGATGAACT 61.002 55.000 11.67 0.00 42.86 3.01
506 507 0.518195 TCACGTGCGTCGATGAACTA 59.482 50.000 11.67 0.00 42.86 2.24
507 508 0.633733 CACGTGCGTCGATGAACTAC 59.366 55.000 13.90 3.45 42.86 2.73
508 509 0.455633 ACGTGCGTCGATGAACTACC 60.456 55.000 13.90 0.00 42.86 3.18
509 510 0.179171 CGTGCGTCGATGAACTACCT 60.179 55.000 13.90 0.00 42.86 3.08
510 511 1.063027 CGTGCGTCGATGAACTACCTA 59.937 52.381 13.90 0.00 42.86 3.08
511 512 2.448219 GTGCGTCGATGAACTACCTAC 58.552 52.381 9.31 0.00 0.00 3.18
512 513 1.063027 TGCGTCGATGAACTACCTACG 59.937 52.381 9.31 0.00 0.00 3.51
513 514 1.739618 CGTCGATGAACTACCTACGC 58.260 55.000 0.00 0.00 0.00 4.42
514 515 1.329906 CGTCGATGAACTACCTACGCT 59.670 52.381 0.00 0.00 0.00 5.07
515 516 2.717530 GTCGATGAACTACCTACGCTG 58.282 52.381 0.00 0.00 0.00 5.18
516 517 2.097142 GTCGATGAACTACCTACGCTGT 59.903 50.000 0.00 0.00 0.00 4.40
517 518 2.751259 TCGATGAACTACCTACGCTGTT 59.249 45.455 0.00 0.00 0.00 3.16
518 519 3.192001 TCGATGAACTACCTACGCTGTTT 59.808 43.478 0.00 0.00 0.00 2.83
519 520 3.924686 CGATGAACTACCTACGCTGTTTT 59.075 43.478 0.00 0.00 0.00 2.43
520 521 4.387862 CGATGAACTACCTACGCTGTTTTT 59.612 41.667 0.00 0.00 0.00 1.94
556 557 0.533308 TGTGGTTTCGAAACGAGGGG 60.533 55.000 29.23 0.00 39.77 4.79
557 558 1.598685 TGGTTTCGAAACGAGGGGC 60.599 57.895 29.23 17.42 39.77 5.80
558 559 1.598685 GGTTTCGAAACGAGGGGCA 60.599 57.895 29.23 0.00 39.77 5.36
559 560 0.958876 GGTTTCGAAACGAGGGGCAT 60.959 55.000 29.23 0.00 39.77 4.40
560 561 0.168128 GTTTCGAAACGAGGGGCATG 59.832 55.000 24.02 0.00 37.14 4.06
561 562 0.035598 TTTCGAAACGAGGGGCATGA 59.964 50.000 6.47 0.00 37.14 3.07
562 563 0.672401 TTCGAAACGAGGGGCATGAC 60.672 55.000 0.00 0.00 37.14 3.06
563 564 1.079127 CGAAACGAGGGGCATGACT 60.079 57.895 0.00 0.00 0.00 3.41
564 565 0.174845 CGAAACGAGGGGCATGACTA 59.825 55.000 0.00 0.00 0.00 2.59
565 566 1.202533 CGAAACGAGGGGCATGACTAT 60.203 52.381 0.00 0.00 0.00 2.12
566 567 2.213499 GAAACGAGGGGCATGACTATG 58.787 52.381 0.00 0.00 37.36 2.23
567 568 0.469917 AACGAGGGGCATGACTATGG 59.530 55.000 0.00 0.00 34.79 2.74
568 569 0.398522 ACGAGGGGCATGACTATGGA 60.399 55.000 0.00 0.00 34.79 3.41
569 570 0.979665 CGAGGGGCATGACTATGGAT 59.020 55.000 0.00 0.00 34.79 3.41
570 571 1.338484 CGAGGGGCATGACTATGGATG 60.338 57.143 0.00 0.00 34.79 3.51
571 572 1.004044 GAGGGGCATGACTATGGATGG 59.996 57.143 0.00 0.00 34.79 3.51
572 573 1.067295 GGGGCATGACTATGGATGGA 58.933 55.000 0.00 0.00 34.79 3.41
573 574 1.271597 GGGGCATGACTATGGATGGAC 60.272 57.143 0.00 0.00 34.79 4.02
574 575 1.609061 GGGCATGACTATGGATGGACG 60.609 57.143 0.00 0.00 34.79 4.79
575 576 1.151668 GCATGACTATGGATGGACGC 58.848 55.000 0.00 0.00 34.79 5.19
576 577 1.422388 CATGACTATGGATGGACGCG 58.578 55.000 3.53 3.53 0.00 6.01
577 578 1.040646 ATGACTATGGATGGACGCGT 58.959 50.000 13.85 13.85 0.00 6.01
578 579 0.384309 TGACTATGGATGGACGCGTC 59.616 55.000 30.67 30.67 0.00 5.19
1158 1197 1.990060 ATCCTCCACCGACCACCTG 60.990 63.158 0.00 0.00 0.00 4.00
1201 1240 1.541118 TCCTCCTCCAATGCCACCA 60.541 57.895 0.00 0.00 0.00 4.17
1624 1663 1.536662 GAGGACCCGCCCAGGATAT 60.537 63.158 0.00 0.00 45.00 1.63
1925 1968 1.324383 CAGCCTGATGCCATATTGCA 58.676 50.000 3.65 3.65 46.94 4.08
1937 1980 7.868922 TGATGCCATATTGCAATGTTTCTATTC 59.131 33.333 22.27 9.48 45.84 1.75
2280 2331 5.833406 TTGTGTGATTGTTCATCAACACT 57.167 34.783 13.67 0.00 43.93 3.55
2308 2359 6.478512 TGTCTACCATATGTAACTGCATGA 57.521 37.500 0.00 0.00 0.00 3.07
2382 2437 7.699391 CACATAGCAATTGTCTTTATTGGTGAG 59.301 37.037 7.40 5.56 42.01 3.51
2389 2444 8.918658 CAATTGTCTTTATTGGTGAGTTTCATG 58.081 33.333 0.00 0.00 31.00 3.07
3245 3302 9.778993 GTTTACCTTTTTATCGGAATACTTTCC 57.221 33.333 0.00 0.00 46.85 3.13
3555 3660 6.026513 GTCTCTGAAATTTCTTGTATGCAGC 58.973 40.000 18.64 0.00 0.00 5.25
3580 3685 6.116126 GGATTCTGTTGGCTATCTACTGTTT 58.884 40.000 0.00 0.00 0.00 2.83
3636 3977 7.395772 TGAATTATTTGACATAGCTCCACCAAA 59.604 33.333 0.00 0.00 0.00 3.28
3645 3986 7.498900 TGACATAGCTCCACCAAACTTATATTG 59.501 37.037 0.00 0.00 0.00 1.90
3717 4215 5.651139 AGCACCGAGTCTACTTATTAACTCA 59.349 40.000 0.00 0.00 38.41 3.41
3736 4234 3.088532 TCATTAACCAGATGCACCCAAC 58.911 45.455 0.00 0.00 0.00 3.77
3898 4396 6.488006 TGCTGAAGAAAGAAGCTGAATACTTT 59.512 34.615 0.00 0.00 37.82 2.66
4004 4502 3.182967 CACTCTTGCCGTCACTATCTTC 58.817 50.000 0.00 0.00 0.00 2.87
4090 4588 5.475719 AGAAGTTGTAAGCGTGCACTTATA 58.524 37.500 16.19 3.27 34.76 0.98
4146 4644 0.750850 TGCCCTTACTGCGTATCTCC 59.249 55.000 0.00 0.00 0.00 3.71
4154 4652 1.107114 CTGCGTATCTCCACAGAGGT 58.893 55.000 0.00 0.00 40.83 3.85
4387 4890 8.448615 GTGTGGACTAAATAATGAACCTAACAC 58.551 37.037 0.00 0.00 0.00 3.32
4394 4897 9.840427 CTAAATAATGAACCTAACACCTGTTTG 57.160 33.333 0.00 0.00 39.31 2.93
4578 5081 1.427368 ACTGGGAAATGGGCAGTTACA 59.573 47.619 0.00 0.00 0.00 2.41
4789 5293 2.493278 CTGAATGGCCAACTTTAGGGTG 59.507 50.000 10.96 0.00 0.00 4.61
4800 5304 6.068473 CAACTTTAGGGTGGTAACTCAAAC 57.932 41.667 0.00 0.00 37.61 2.93
4801 5305 5.376756 ACTTTAGGGTGGTAACTCAAACA 57.623 39.130 0.00 0.00 37.61 2.83
4802 5306 5.948842 ACTTTAGGGTGGTAACTCAAACAT 58.051 37.500 0.00 0.00 37.61 2.71
4803 5307 7.081857 ACTTTAGGGTGGTAACTCAAACATA 57.918 36.000 0.00 0.00 37.61 2.29
4804 5308 7.166167 ACTTTAGGGTGGTAACTCAAACATAG 58.834 38.462 0.00 0.00 37.61 2.23
4805 5309 4.569719 AGGGTGGTAACTCAAACATAGG 57.430 45.455 0.00 0.00 37.61 2.57
4806 5310 4.172807 AGGGTGGTAACTCAAACATAGGA 58.827 43.478 0.00 0.00 37.61 2.94
4807 5311 4.600111 AGGGTGGTAACTCAAACATAGGAA 59.400 41.667 0.00 0.00 37.61 3.36
4808 5312 4.941873 GGGTGGTAACTCAAACATAGGAAG 59.058 45.833 0.00 0.00 37.61 3.46
4878 5382 2.888212 TCTTGCTAAAAGCCCACCATT 58.112 42.857 0.00 0.00 41.51 3.16
4968 5472 1.605710 CATTGCTCGCCTTAATCCCTG 59.394 52.381 0.00 0.00 0.00 4.45
5045 5549 5.396660 GGACCCGGTTATGTAATTTCTGGTA 60.397 44.000 0.00 0.00 0.00 3.25
5154 5713 8.456471 ACTTGAATCATGTTATGTCAATCACTG 58.544 33.333 0.00 0.00 0.00 3.66
5160 5719 8.479313 TCATGTTATGTCAATCACTGTACTTC 57.521 34.615 0.00 0.00 0.00 3.01
5381 5940 1.335145 GCCCATCCTGCTGCAATTAT 58.665 50.000 3.02 0.00 0.00 1.28
5391 5950 7.066307 TCCTGCTGCAATTATAGATAGTGAA 57.934 36.000 3.02 0.00 0.00 3.18
5465 6024 1.708993 TTGGCTGGCTGGTGTTCTCT 61.709 55.000 2.00 0.00 0.00 3.10
5512 6071 2.348888 GCTGCTGCTCCATTGGCTT 61.349 57.895 8.53 0.00 36.03 4.35
5754 6317 7.718753 AGAAAATGATCACAACTTGTCTCTCTT 59.281 33.333 0.00 0.00 0.00 2.85
5860 6423 3.457610 AGTTGTGGCTCCAAATTTGTG 57.542 42.857 16.73 10.13 0.00 3.33
5900 6463 6.208797 TCAGTCCAGAATATAAGGTGTATCGG 59.791 42.308 0.00 0.00 0.00 4.18
5906 6469 7.095774 CCAGAATATAAGGTGTATCGGTTTTCG 60.096 40.741 0.00 0.00 40.90 3.46
6221 7097 3.168271 CACGGATTGTGTGCGGAG 58.832 61.111 0.00 0.00 46.92 4.63
6269 7145 2.811431 TGTCTTGTCTGGCGTTAAATGG 59.189 45.455 0.00 0.00 0.00 3.16
6272 7148 2.799126 TGTCTGGCGTTAAATGGGAT 57.201 45.000 0.00 0.00 0.00 3.85
6293 7169 5.353123 GGATTGCGACCAGAGTTAAATACAA 59.647 40.000 0.00 0.00 0.00 2.41
6366 7243 5.065090 CAGGTTTGCATAAATCACTGATCGA 59.935 40.000 0.00 0.00 31.92 3.59
6368 7245 4.777140 TTGCATAAATCACTGATCGACG 57.223 40.909 0.00 0.00 0.00 5.12
6385 7262 2.538512 ACGGAGTAGGGTGTTTTGAC 57.461 50.000 0.00 0.00 41.94 3.18
6386 7263 1.269936 ACGGAGTAGGGTGTTTTGACG 60.270 52.381 0.00 0.00 41.94 4.35
6387 7264 1.804601 GGAGTAGGGTGTTTTGACGG 58.195 55.000 0.00 0.00 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 2.048597 TAGAGTGCCCGTGCGTTG 60.049 61.111 0.00 0.00 41.78 4.10
15 16 1.246056 TAGTAGAGTGCCCGTGCGTT 61.246 55.000 0.00 0.00 41.78 4.84
16 17 1.654954 CTAGTAGAGTGCCCGTGCGT 61.655 60.000 0.00 0.00 41.78 5.24
17 18 1.064296 CTAGTAGAGTGCCCGTGCG 59.936 63.158 0.00 0.00 41.78 5.34
18 19 0.100861 GACTAGTAGAGTGCCCGTGC 59.899 60.000 3.59 0.00 39.06 5.34
19 20 1.460504 TGACTAGTAGAGTGCCCGTG 58.539 55.000 3.59 0.00 39.06 4.94
20 21 2.299521 GATGACTAGTAGAGTGCCCGT 58.700 52.381 3.59 0.00 39.06 5.28
21 22 1.264557 CGATGACTAGTAGAGTGCCCG 59.735 57.143 3.59 0.00 39.06 6.13
22 23 2.299521 ACGATGACTAGTAGAGTGCCC 58.700 52.381 3.59 0.00 39.06 5.36
23 24 4.378774 TCTACGATGACTAGTAGAGTGCC 58.621 47.826 3.59 0.00 42.86 5.01
24 25 5.754406 TCTTCTACGATGACTAGTAGAGTGC 59.246 44.000 3.59 0.00 46.59 4.40
25 26 6.422701 CCTCTTCTACGATGACTAGTAGAGTG 59.577 46.154 3.59 4.28 46.59 3.51
26 27 6.324512 TCCTCTTCTACGATGACTAGTAGAGT 59.675 42.308 3.59 5.70 46.59 3.24
27 28 6.751157 TCCTCTTCTACGATGACTAGTAGAG 58.249 44.000 3.59 0.81 46.59 2.43
28 29 6.728089 TCCTCTTCTACGATGACTAGTAGA 57.272 41.667 3.59 1.66 45.11 2.59
29 30 6.074195 CGTTCCTCTTCTACGATGACTAGTAG 60.074 46.154 0.00 0.00 41.08 2.57
30 31 5.752472 CGTTCCTCTTCTACGATGACTAGTA 59.248 44.000 0.00 0.00 37.47 1.82
31 32 4.571580 CGTTCCTCTTCTACGATGACTAGT 59.428 45.833 0.00 0.00 37.47 2.57
32 33 4.553156 GCGTTCCTCTTCTACGATGACTAG 60.553 50.000 0.00 0.00 37.47 2.57
33 34 3.311871 GCGTTCCTCTTCTACGATGACTA 59.688 47.826 0.00 0.00 37.47 2.59
34 35 2.097791 GCGTTCCTCTTCTACGATGACT 59.902 50.000 0.00 0.00 37.47 3.41
35 36 2.452105 GCGTTCCTCTTCTACGATGAC 58.548 52.381 0.00 0.00 37.47 3.06
36 37 1.404391 GGCGTTCCTCTTCTACGATGA 59.596 52.381 0.00 0.00 37.47 2.92
37 38 1.536284 GGGCGTTCCTCTTCTACGATG 60.536 57.143 0.00 0.00 37.47 3.84
38 39 0.745468 GGGCGTTCCTCTTCTACGAT 59.255 55.000 0.00 0.00 37.47 3.73
39 40 1.651240 CGGGCGTTCCTCTTCTACGA 61.651 60.000 0.00 0.00 37.47 3.43
40 41 1.226603 CGGGCGTTCCTCTTCTACG 60.227 63.158 0.00 0.00 38.26 3.51
41 42 1.141234 CCGGGCGTTCCTCTTCTAC 59.859 63.158 0.00 0.00 0.00 2.59
42 43 0.612732 TTCCGGGCGTTCCTCTTCTA 60.613 55.000 0.00 0.00 0.00 2.10
43 44 1.911766 TTCCGGGCGTTCCTCTTCT 60.912 57.895 0.00 0.00 0.00 2.85
44 45 1.740664 GTTCCGGGCGTTCCTCTTC 60.741 63.158 0.00 0.00 0.00 2.87
45 46 2.346365 GTTCCGGGCGTTCCTCTT 59.654 61.111 0.00 0.00 0.00 2.85
46 47 4.065281 CGTTCCGGGCGTTCCTCT 62.065 66.667 0.00 0.00 0.00 3.69
47 48 4.368543 ACGTTCCGGGCGTTCCTC 62.369 66.667 16.94 0.00 39.79 3.71
48 49 4.368543 GACGTTCCGGGCGTTCCT 62.369 66.667 21.88 3.69 43.04 3.36
49 50 4.368543 AGACGTTCCGGGCGTTCC 62.369 66.667 21.88 12.68 43.04 3.62
50 51 2.476534 TACAGACGTTCCGGGCGTTC 62.477 60.000 21.88 15.74 43.04 3.95
51 52 2.563798 TACAGACGTTCCGGGCGTT 61.564 57.895 21.88 11.73 43.04 4.84
52 53 2.985282 TACAGACGTTCCGGGCGT 60.985 61.111 21.33 21.33 45.86 5.68
53 54 2.505557 GTACAGACGTTCCGGGCG 60.506 66.667 15.75 15.75 0.00 6.13
54 55 2.505557 CGTACAGACGTTCCGGGC 60.506 66.667 0.00 0.00 44.31 6.13
63 64 3.921677 TGAAACCCTTGATCGTACAGAC 58.078 45.455 0.00 0.00 0.00 3.51
64 65 3.576982 ACTGAAACCCTTGATCGTACAGA 59.423 43.478 0.00 0.00 0.00 3.41
65 66 3.926616 ACTGAAACCCTTGATCGTACAG 58.073 45.455 0.00 0.00 0.00 2.74
66 67 4.345859 AACTGAAACCCTTGATCGTACA 57.654 40.909 0.00 0.00 0.00 2.90
67 68 4.753107 TGAAACTGAAACCCTTGATCGTAC 59.247 41.667 0.00 0.00 0.00 3.67
68 69 4.963373 TGAAACTGAAACCCTTGATCGTA 58.037 39.130 0.00 0.00 0.00 3.43
69 70 3.815809 TGAAACTGAAACCCTTGATCGT 58.184 40.909 0.00 0.00 0.00 3.73
70 71 4.320494 CCTTGAAACTGAAACCCTTGATCG 60.320 45.833 0.00 0.00 0.00 3.69
71 72 4.584743 ACCTTGAAACTGAAACCCTTGATC 59.415 41.667 0.00 0.00 0.00 2.92
72 73 4.342092 CACCTTGAAACTGAAACCCTTGAT 59.658 41.667 0.00 0.00 0.00 2.57
73 74 3.699038 CACCTTGAAACTGAAACCCTTGA 59.301 43.478 0.00 0.00 0.00 3.02
74 75 3.699038 TCACCTTGAAACTGAAACCCTTG 59.301 43.478 0.00 0.00 0.00 3.61
75 76 3.954258 CTCACCTTGAAACTGAAACCCTT 59.046 43.478 0.00 0.00 0.00 3.95
76 77 3.202151 TCTCACCTTGAAACTGAAACCCT 59.798 43.478 0.00 0.00 0.00 4.34
77 78 3.551846 TCTCACCTTGAAACTGAAACCC 58.448 45.455 0.00 0.00 0.00 4.11
78 79 5.067805 ACATTCTCACCTTGAAACTGAAACC 59.932 40.000 0.00 0.00 0.00 3.27
79 80 6.136541 ACATTCTCACCTTGAAACTGAAAC 57.863 37.500 0.00 0.00 0.00 2.78
80 81 6.152661 ACAACATTCTCACCTTGAAACTGAAA 59.847 34.615 0.00 0.00 0.00 2.69
81 82 5.652014 ACAACATTCTCACCTTGAAACTGAA 59.348 36.000 0.00 0.00 0.00 3.02
82 83 5.066375 CACAACATTCTCACCTTGAAACTGA 59.934 40.000 0.00 0.00 0.00 3.41
83 84 5.276270 CACAACATTCTCACCTTGAAACTG 58.724 41.667 0.00 0.00 0.00 3.16
84 85 4.202050 GCACAACATTCTCACCTTGAAACT 60.202 41.667 0.00 0.00 0.00 2.66
85 86 4.044426 GCACAACATTCTCACCTTGAAAC 58.956 43.478 0.00 0.00 0.00 2.78
86 87 3.068024 GGCACAACATTCTCACCTTGAAA 59.932 43.478 0.00 0.00 0.00 2.69
87 88 2.622942 GGCACAACATTCTCACCTTGAA 59.377 45.455 0.00 0.00 0.00 2.69
88 89 2.158623 AGGCACAACATTCTCACCTTGA 60.159 45.455 0.00 0.00 0.00 3.02
89 90 2.030540 CAGGCACAACATTCTCACCTTG 60.031 50.000 0.00 0.00 0.00 3.61
90 91 2.158623 TCAGGCACAACATTCTCACCTT 60.159 45.455 0.00 0.00 0.00 3.50
91 92 1.421268 TCAGGCACAACATTCTCACCT 59.579 47.619 0.00 0.00 0.00 4.00
92 93 1.808945 CTCAGGCACAACATTCTCACC 59.191 52.381 0.00 0.00 0.00 4.02
93 94 1.198637 GCTCAGGCACAACATTCTCAC 59.801 52.381 0.00 0.00 38.54 3.51
94 95 1.202794 TGCTCAGGCACAACATTCTCA 60.203 47.619 0.00 0.00 44.28 3.27
95 96 1.527034 TGCTCAGGCACAACATTCTC 58.473 50.000 0.00 0.00 44.28 2.87
96 97 3.731716 TGCTCAGGCACAACATTCT 57.268 47.368 0.00 0.00 44.28 2.40
106 107 2.203181 GCTCCTCCATGCTCAGGC 60.203 66.667 0.00 0.00 39.26 4.85
107 108 2.108566 CGCTCCTCCATGCTCAGG 59.891 66.667 0.00 0.00 0.00 3.86
108 109 2.108566 CCGCTCCTCCATGCTCAG 59.891 66.667 0.00 0.00 0.00 3.35
109 110 4.166888 GCCGCTCCTCCATGCTCA 62.167 66.667 0.00 0.00 0.00 4.26
110 111 3.687321 TTGCCGCTCCTCCATGCTC 62.687 63.158 0.00 0.00 0.00 4.26
111 112 3.720601 TTGCCGCTCCTCCATGCT 61.721 61.111 0.00 0.00 0.00 3.79
112 113 3.512516 GTTGCCGCTCCTCCATGC 61.513 66.667 0.00 0.00 0.00 4.06
113 114 2.110967 CAGTTGCCGCTCCTCCATG 61.111 63.158 0.00 0.00 0.00 3.66
114 115 2.270205 CAGTTGCCGCTCCTCCAT 59.730 61.111 0.00 0.00 0.00 3.41
115 116 4.704833 GCAGTTGCCGCTCCTCCA 62.705 66.667 0.00 0.00 34.31 3.86
116 117 4.704833 TGCAGTTGCCGCTCCTCC 62.705 66.667 1.06 0.00 41.18 4.30
117 118 1.795170 TTTTGCAGTTGCCGCTCCTC 61.795 55.000 1.06 0.00 41.18 3.71
118 119 1.181098 ATTTTGCAGTTGCCGCTCCT 61.181 50.000 1.06 0.00 41.18 3.69
119 120 1.010419 CATTTTGCAGTTGCCGCTCC 61.010 55.000 1.06 0.00 41.18 4.70
120 121 0.039256 TCATTTTGCAGTTGCCGCTC 60.039 50.000 1.06 0.00 41.18 5.03
121 122 0.604578 ATCATTTTGCAGTTGCCGCT 59.395 45.000 1.06 0.00 41.18 5.52
122 123 1.431496 AATCATTTTGCAGTTGCCGC 58.569 45.000 1.06 0.00 41.18 6.53
123 124 2.158058 CCAAATCATTTTGCAGTTGCCG 59.842 45.455 1.06 0.00 40.77 5.69
124 125 3.140623 ACCAAATCATTTTGCAGTTGCC 58.859 40.909 1.06 0.00 40.77 4.52
125 126 4.272991 TCAACCAAATCATTTTGCAGTTGC 59.727 37.500 12.05 0.00 40.72 4.17
126 127 5.559417 GCTCAACCAAATCATTTTGCAGTTG 60.559 40.000 11.23 11.23 41.43 3.16
127 128 4.512571 GCTCAACCAAATCATTTTGCAGTT 59.487 37.500 0.00 0.00 40.77 3.16
128 129 4.060205 GCTCAACCAAATCATTTTGCAGT 58.940 39.130 0.00 0.00 40.77 4.40
129 130 4.059511 TGCTCAACCAAATCATTTTGCAG 58.940 39.130 0.00 0.00 40.77 4.41
130 131 4.069300 TGCTCAACCAAATCATTTTGCA 57.931 36.364 0.00 0.00 40.77 4.08
131 132 6.314400 ACATATGCTCAACCAAATCATTTTGC 59.686 34.615 1.58 0.00 40.77 3.68
132 133 7.201574 CCACATATGCTCAACCAAATCATTTTG 60.202 37.037 1.58 0.00 41.59 2.44
133 134 6.819649 CCACATATGCTCAACCAAATCATTTT 59.180 34.615 1.58 0.00 0.00 1.82
134 135 6.342906 CCACATATGCTCAACCAAATCATTT 58.657 36.000 1.58 0.00 0.00 2.32
135 136 5.163385 CCCACATATGCTCAACCAAATCATT 60.163 40.000 1.58 0.00 0.00 2.57
136 137 4.342951 CCCACATATGCTCAACCAAATCAT 59.657 41.667 1.58 0.00 0.00 2.45
137 138 3.700539 CCCACATATGCTCAACCAAATCA 59.299 43.478 1.58 0.00 0.00 2.57
138 139 3.491447 GCCCACATATGCTCAACCAAATC 60.491 47.826 1.58 0.00 0.00 2.17
139 140 2.431782 GCCCACATATGCTCAACCAAAT 59.568 45.455 1.58 0.00 0.00 2.32
140 141 1.824230 GCCCACATATGCTCAACCAAA 59.176 47.619 1.58 0.00 0.00 3.28
141 142 1.005805 AGCCCACATATGCTCAACCAA 59.994 47.619 1.58 0.00 30.33 3.67
142 143 0.625316 AGCCCACATATGCTCAACCA 59.375 50.000 1.58 0.00 30.33 3.67
143 144 3.502164 AGCCCACATATGCTCAACC 57.498 52.632 1.58 0.00 30.33 3.77
148 149 2.304092 CAACATGAGCCCACATATGCT 58.696 47.619 1.58 0.00 41.42 3.79
149 150 1.338973 CCAACATGAGCCCACATATGC 59.661 52.381 1.58 0.00 0.00 3.14
150 151 1.338973 GCCAACATGAGCCCACATATG 59.661 52.381 0.00 0.00 0.00 1.78
151 152 1.063792 TGCCAACATGAGCCCACATAT 60.064 47.619 0.00 0.00 0.00 1.78
152 153 0.330941 TGCCAACATGAGCCCACATA 59.669 50.000 0.00 0.00 0.00 2.29
153 154 0.542467 TTGCCAACATGAGCCCACAT 60.542 50.000 0.00 0.00 0.00 3.21
154 155 1.152589 TTGCCAACATGAGCCCACA 60.153 52.632 0.00 0.00 0.00 4.17
155 156 1.290009 GTTGCCAACATGAGCCCAC 59.710 57.895 1.91 0.00 0.00 4.61
156 157 1.907807 GGTTGCCAACATGAGCCCA 60.908 57.895 10.18 0.00 0.00 5.36
157 158 1.470996 TTGGTTGCCAACATGAGCCC 61.471 55.000 10.18 0.00 38.75 5.19
158 159 2.048601 TTGGTTGCCAACATGAGCC 58.951 52.632 10.18 0.00 38.75 4.70
166 167 1.273048 GATGCATCTGTTGGTTGCCAA 59.727 47.619 19.70 0.00 41.69 4.52
167 168 0.889994 GATGCATCTGTTGGTTGCCA 59.110 50.000 19.70 0.00 39.24 4.92
168 169 1.180029 AGATGCATCTGTTGGTTGCC 58.820 50.000 28.21 0.00 39.24 4.52
169 170 2.490903 AGAAGATGCATCTGTTGGTTGC 59.509 45.455 29.34 4.82 40.11 4.17
170 171 4.778534 AAGAAGATGCATCTGTTGGTTG 57.221 40.909 29.34 0.00 37.19 3.77
171 172 7.472334 AATAAAGAAGATGCATCTGTTGGTT 57.528 32.000 29.34 19.39 37.19 3.67
172 173 6.183360 CGAATAAAGAAGATGCATCTGTTGGT 60.183 38.462 29.34 13.76 37.19 3.67
173 174 6.197276 CGAATAAAGAAGATGCATCTGTTGG 58.803 40.000 29.34 13.96 37.19 3.77
174 175 6.197276 CCGAATAAAGAAGATGCATCTGTTG 58.803 40.000 29.34 12.88 37.19 3.33
175 176 5.220931 GCCGAATAAAGAAGATGCATCTGTT 60.221 40.000 29.34 23.12 37.19 3.16
176 177 4.274459 GCCGAATAAAGAAGATGCATCTGT 59.726 41.667 29.34 18.60 37.19 3.41
177 178 4.514441 AGCCGAATAAAGAAGATGCATCTG 59.486 41.667 29.34 13.61 37.19 2.90
178 179 4.712476 AGCCGAATAAAGAAGATGCATCT 58.288 39.130 23.75 23.75 39.22 2.90
179 180 5.210715 CAAGCCGAATAAAGAAGATGCATC 58.789 41.667 19.37 19.37 0.00 3.91
180 181 4.498682 GCAAGCCGAATAAAGAAGATGCAT 60.499 41.667 0.00 0.00 0.00 3.96
181 182 3.181497 GCAAGCCGAATAAAGAAGATGCA 60.181 43.478 0.00 0.00 0.00 3.96
182 183 3.181497 TGCAAGCCGAATAAAGAAGATGC 60.181 43.478 0.00 0.00 0.00 3.91
183 184 4.621068 TGCAAGCCGAATAAAGAAGATG 57.379 40.909 0.00 0.00 0.00 2.90
184 185 5.643379 TTTGCAAGCCGAATAAAGAAGAT 57.357 34.783 0.00 0.00 0.00 2.40
185 186 5.009610 AGTTTTGCAAGCCGAATAAAGAAGA 59.990 36.000 0.00 0.00 0.00 2.87
186 187 5.222631 AGTTTTGCAAGCCGAATAAAGAAG 58.777 37.500 0.00 0.00 0.00 2.85
187 188 5.195001 AGTTTTGCAAGCCGAATAAAGAA 57.805 34.783 0.00 0.00 0.00 2.52
188 189 4.846779 AGTTTTGCAAGCCGAATAAAGA 57.153 36.364 0.00 0.00 0.00 2.52
189 190 6.033831 CACATAGTTTTGCAAGCCGAATAAAG 59.966 38.462 0.00 0.00 0.00 1.85
190 191 5.861251 CACATAGTTTTGCAAGCCGAATAAA 59.139 36.000 0.00 0.00 0.00 1.40
191 192 5.182190 TCACATAGTTTTGCAAGCCGAATAA 59.818 36.000 0.00 0.00 0.00 1.40
192 193 4.697828 TCACATAGTTTTGCAAGCCGAATA 59.302 37.500 0.00 0.00 0.00 1.75
193 194 3.505680 TCACATAGTTTTGCAAGCCGAAT 59.494 39.130 0.00 0.00 0.00 3.34
194 195 2.881513 TCACATAGTTTTGCAAGCCGAA 59.118 40.909 0.00 0.00 0.00 4.30
195 196 2.483877 CTCACATAGTTTTGCAAGCCGA 59.516 45.455 0.00 0.00 0.00 5.54
196 197 2.483877 TCTCACATAGTTTTGCAAGCCG 59.516 45.455 0.00 0.00 0.00 5.52
197 198 3.253188 TGTCTCACATAGTTTTGCAAGCC 59.747 43.478 0.00 0.00 0.00 4.35
198 199 4.488126 TGTCTCACATAGTTTTGCAAGC 57.512 40.909 0.00 0.00 0.00 4.01
199 200 7.935338 AAAATGTCTCACATAGTTTTGCAAG 57.065 32.000 0.00 0.00 37.97 4.01
200 201 9.243637 GTAAAAATGTCTCACATAGTTTTGCAA 57.756 29.630 0.00 0.00 37.97 4.08
201 202 8.629158 AGTAAAAATGTCTCACATAGTTTTGCA 58.371 29.630 12.87 0.00 37.97 4.08
202 203 9.463443 AAGTAAAAATGTCTCACATAGTTTTGC 57.537 29.630 8.38 7.45 37.97 3.68
210 211 9.840427 CCGAATAAAAGTAAAAATGTCTCACAT 57.160 29.630 0.00 0.00 41.31 3.21
211 212 8.842280 ACCGAATAAAAGTAAAAATGTCTCACA 58.158 29.630 0.00 0.00 0.00 3.58
212 213 9.673454 AACCGAATAAAAGTAAAAATGTCTCAC 57.327 29.630 0.00 0.00 0.00 3.51
225 226 9.401873 GCATAGTTTTACAAACCGAATAAAAGT 57.598 29.630 0.00 0.00 36.15 2.66
226 227 9.620660 AGCATAGTTTTACAAACCGAATAAAAG 57.379 29.630 0.00 0.00 30.51 2.27
278 279 9.979578 ACTTTTGCATTGAAACATATAGTCAAA 57.020 25.926 0.00 0.00 35.07 2.69
279 280 9.979578 AACTTTTGCATTGAAACATATAGTCAA 57.020 25.926 0.00 0.00 35.83 3.18
280 281 9.409312 CAACTTTTGCATTGAAACATATAGTCA 57.591 29.630 0.00 0.00 0.00 3.41
281 282 9.410556 ACAACTTTTGCATTGAAACATATAGTC 57.589 29.630 4.82 0.00 0.00 2.59
282 283 9.195411 CACAACTTTTGCATTGAAACATATAGT 57.805 29.630 4.82 0.00 0.00 2.12
283 284 9.195411 ACACAACTTTTGCATTGAAACATATAG 57.805 29.630 4.82 0.00 0.00 1.31
284 285 8.976471 CACACAACTTTTGCATTGAAACATATA 58.024 29.630 4.82 0.00 0.00 0.86
285 286 7.495279 ACACACAACTTTTGCATTGAAACATAT 59.505 29.630 4.82 0.00 0.00 1.78
286 287 6.815641 ACACACAACTTTTGCATTGAAACATA 59.184 30.769 4.82 0.00 0.00 2.29
287 288 5.642919 ACACACAACTTTTGCATTGAAACAT 59.357 32.000 4.82 0.00 0.00 2.71
288 289 4.993584 ACACACAACTTTTGCATTGAAACA 59.006 33.333 4.82 0.00 0.00 2.83
289 290 5.119898 TCACACACAACTTTTGCATTGAAAC 59.880 36.000 4.82 0.00 0.00 2.78
290 291 5.233225 TCACACACAACTTTTGCATTGAAA 58.767 33.333 4.82 0.00 0.00 2.69
291 292 4.814147 TCACACACAACTTTTGCATTGAA 58.186 34.783 4.82 0.00 0.00 2.69
292 293 4.446994 TCACACACAACTTTTGCATTGA 57.553 36.364 4.82 0.00 0.00 2.57
293 294 5.107182 TGTTTCACACACAACTTTTGCATTG 60.107 36.000 0.00 0.00 0.00 2.82
294 295 4.993584 TGTTTCACACACAACTTTTGCATT 59.006 33.333 0.00 0.00 0.00 3.56
295 296 4.564041 TGTTTCACACACAACTTTTGCAT 58.436 34.783 0.00 0.00 0.00 3.96
296 297 3.982475 TGTTTCACACACAACTTTTGCA 58.018 36.364 0.00 0.00 0.00 4.08
297 298 4.981389 TTGTTTCACACACAACTTTTGC 57.019 36.364 0.00 0.00 33.98 3.68
298 299 7.573916 TGTATTGTTTCACACACAACTTTTG 57.426 32.000 0.00 0.00 36.97 2.44
299 300 8.594881 TTTGTATTGTTTCACACACAACTTTT 57.405 26.923 3.75 0.00 36.97 2.27
300 301 8.594881 TTTTGTATTGTTTCACACACAACTTT 57.405 26.923 3.75 0.00 36.97 2.66
301 302 8.594881 TTTTTGTATTGTTTCACACACAACTT 57.405 26.923 3.75 0.00 36.97 2.66
302 303 8.655092 CATTTTTGTATTGTTTCACACACAACT 58.345 29.630 3.75 0.00 36.97 3.16
303 304 8.651588 TCATTTTTGTATTGTTTCACACACAAC 58.348 29.630 3.75 0.00 36.97 3.32
304 305 8.651588 GTCATTTTTGTATTGTTTCACACACAA 58.348 29.630 0.00 0.00 38.49 3.33
305 306 8.031864 AGTCATTTTTGTATTGTTTCACACACA 58.968 29.630 0.00 0.00 33.98 3.72
306 307 8.406172 AGTCATTTTTGTATTGTTTCACACAC 57.594 30.769 0.00 0.00 33.98 3.82
331 332 5.445964 GAGGCCACCCTATTTCAAGAAATA 58.554 41.667 5.01 13.04 43.12 1.40
332 333 4.281657 GAGGCCACCCTATTTCAAGAAAT 58.718 43.478 5.01 12.21 43.12 2.17
333 334 3.697166 GAGGCCACCCTATTTCAAGAAA 58.303 45.455 5.01 0.00 43.12 2.52
334 335 2.355716 CGAGGCCACCCTATTTCAAGAA 60.356 50.000 5.01 0.00 43.12 2.52
335 336 1.209504 CGAGGCCACCCTATTTCAAGA 59.790 52.381 5.01 0.00 43.12 3.02
336 337 1.065418 ACGAGGCCACCCTATTTCAAG 60.065 52.381 5.01 0.00 43.12 3.02
337 338 0.988832 ACGAGGCCACCCTATTTCAA 59.011 50.000 5.01 0.00 43.12 2.69
338 339 0.251916 CACGAGGCCACCCTATTTCA 59.748 55.000 5.01 0.00 43.12 2.69
339 340 0.252197 ACACGAGGCCACCCTATTTC 59.748 55.000 5.01 0.00 43.12 2.17
340 341 0.696501 AACACGAGGCCACCCTATTT 59.303 50.000 5.01 0.00 43.12 1.40
341 342 1.485066 CTAACACGAGGCCACCCTATT 59.515 52.381 5.01 0.00 43.12 1.73
342 343 1.120530 CTAACACGAGGCCACCCTAT 58.879 55.000 5.01 0.00 43.12 2.57
343 344 0.040058 TCTAACACGAGGCCACCCTA 59.960 55.000 5.01 0.00 43.12 3.53
344 345 1.229082 TCTAACACGAGGCCACCCT 60.229 57.895 5.01 0.00 46.74 4.34
345 346 1.079336 GTCTAACACGAGGCCACCC 60.079 63.158 5.01 0.00 0.00 4.61
346 347 0.669625 GTGTCTAACACGAGGCCACC 60.670 60.000 5.01 0.00 39.53 4.61
347 348 2.823628 GTGTCTAACACGAGGCCAC 58.176 57.895 5.01 0.00 39.53 5.01
356 357 1.888512 GGGTCGGTAGTGTGTCTAACA 59.111 52.381 0.00 0.00 36.20 2.41
357 358 1.888512 TGGGTCGGTAGTGTGTCTAAC 59.111 52.381 0.00 0.00 33.31 2.34
358 359 2.291209 TGGGTCGGTAGTGTGTCTAA 57.709 50.000 0.00 0.00 0.00 2.10
359 360 2.291209 TTGGGTCGGTAGTGTGTCTA 57.709 50.000 0.00 0.00 0.00 2.59
360 361 1.416243 TTTGGGTCGGTAGTGTGTCT 58.584 50.000 0.00 0.00 0.00 3.41
361 362 2.467566 ATTTGGGTCGGTAGTGTGTC 57.532 50.000 0.00 0.00 0.00 3.67
362 363 2.633967 TGTATTTGGGTCGGTAGTGTGT 59.366 45.455 0.00 0.00 0.00 3.72
363 364 3.322211 TGTATTTGGGTCGGTAGTGTG 57.678 47.619 0.00 0.00 0.00 3.82
364 365 4.354893 TTTGTATTTGGGTCGGTAGTGT 57.645 40.909 0.00 0.00 0.00 3.55
365 366 4.515944 TGTTTTGTATTTGGGTCGGTAGTG 59.484 41.667 0.00 0.00 0.00 2.74
366 367 4.716794 TGTTTTGTATTTGGGTCGGTAGT 58.283 39.130 0.00 0.00 0.00 2.73
367 368 4.998672 TCTGTTTTGTATTTGGGTCGGTAG 59.001 41.667 0.00 0.00 0.00 3.18
368 369 4.970711 TCTGTTTTGTATTTGGGTCGGTA 58.029 39.130 0.00 0.00 0.00 4.02
369 370 3.822940 TCTGTTTTGTATTTGGGTCGGT 58.177 40.909 0.00 0.00 0.00 4.69
370 371 4.542735 GTTCTGTTTTGTATTTGGGTCGG 58.457 43.478 0.00 0.00 0.00 4.79
371 372 4.215965 CGTTCTGTTTTGTATTTGGGTCG 58.784 43.478 0.00 0.00 0.00 4.79
372 373 4.276431 TCCGTTCTGTTTTGTATTTGGGTC 59.724 41.667 0.00 0.00 0.00 4.46
373 374 4.208746 TCCGTTCTGTTTTGTATTTGGGT 58.791 39.130 0.00 0.00 0.00 4.51
374 375 4.839668 TCCGTTCTGTTTTGTATTTGGG 57.160 40.909 0.00 0.00 0.00 4.12
375 376 4.621034 GCATCCGTTCTGTTTTGTATTTGG 59.379 41.667 0.00 0.00 0.00 3.28
376 377 4.621034 GGCATCCGTTCTGTTTTGTATTTG 59.379 41.667 0.00 0.00 0.00 2.32
377 378 4.614993 CGGCATCCGTTCTGTTTTGTATTT 60.615 41.667 0.00 0.00 42.73 1.40
378 379 3.119990 CGGCATCCGTTCTGTTTTGTATT 60.120 43.478 0.00 0.00 42.73 1.89
379 380 2.418628 CGGCATCCGTTCTGTTTTGTAT 59.581 45.455 0.00 0.00 42.73 2.29
380 381 1.801771 CGGCATCCGTTCTGTTTTGTA 59.198 47.619 0.00 0.00 42.73 2.41
381 382 0.591170 CGGCATCCGTTCTGTTTTGT 59.409 50.000 0.00 0.00 42.73 2.83
382 383 0.109781 CCGGCATCCGTTCTGTTTTG 60.110 55.000 4.47 0.00 46.80 2.44
383 384 1.241315 CCCGGCATCCGTTCTGTTTT 61.241 55.000 0.00 0.00 46.80 2.43
384 385 1.674322 CCCGGCATCCGTTCTGTTT 60.674 57.895 0.00 0.00 46.80 2.83
385 386 2.046314 CCCGGCATCCGTTCTGTT 60.046 61.111 0.00 0.00 46.80 3.16
386 387 4.778143 GCCCGGCATCCGTTCTGT 62.778 66.667 3.91 0.00 46.80 3.41
406 407 4.992511 TTCGTTTGGGTCGGCCGG 62.993 66.667 27.83 6.34 34.97 6.13
407 408 3.719144 GTTCGTTTGGGTCGGCCG 61.719 66.667 22.12 22.12 34.97 6.13
408 409 1.726533 TTTGTTCGTTTGGGTCGGCC 61.727 55.000 0.00 0.00 0.00 6.13
409 410 0.100861 TTTTGTTCGTTTGGGTCGGC 59.899 50.000 0.00 0.00 0.00 5.54
410 411 2.563471 TTTTTGTTCGTTTGGGTCGG 57.437 45.000 0.00 0.00 0.00 4.79
426 427 5.952526 ACGGACGGTCATTTTATCTTTTT 57.047 34.783 10.76 0.00 0.00 1.94
427 428 5.952526 AACGGACGGTCATTTTATCTTTT 57.047 34.783 10.76 0.00 0.00 2.27
428 429 5.470777 TCAAACGGACGGTCATTTTATCTTT 59.529 36.000 10.76 0.00 0.00 2.52
429 430 4.998672 TCAAACGGACGGTCATTTTATCTT 59.001 37.500 10.76 0.00 0.00 2.40
430 431 4.571919 TCAAACGGACGGTCATTTTATCT 58.428 39.130 10.76 0.00 0.00 1.98
431 432 4.932268 TCAAACGGACGGTCATTTTATC 57.068 40.909 10.76 0.00 0.00 1.75
432 433 5.163693 GGATTCAAACGGACGGTCATTTTAT 60.164 40.000 10.76 6.00 0.00 1.40
433 434 4.154556 GGATTCAAACGGACGGTCATTTTA 59.845 41.667 10.76 0.00 0.00 1.52
434 435 3.057806 GGATTCAAACGGACGGTCATTTT 60.058 43.478 10.76 5.51 0.00 1.82
435 436 2.486592 GGATTCAAACGGACGGTCATTT 59.513 45.455 10.76 7.09 0.00 2.32
436 437 2.081462 GGATTCAAACGGACGGTCATT 58.919 47.619 10.76 0.71 0.00 2.57
437 438 1.677820 GGGATTCAAACGGACGGTCAT 60.678 52.381 10.76 0.00 0.00 3.06
438 439 0.320946 GGGATTCAAACGGACGGTCA 60.321 55.000 10.76 0.00 0.00 4.02
439 440 1.022982 GGGGATTCAAACGGACGGTC 61.023 60.000 0.00 0.00 0.00 4.79
440 441 1.002990 GGGGATTCAAACGGACGGT 60.003 57.895 0.00 0.00 0.00 4.83
441 442 1.024579 CAGGGGATTCAAACGGACGG 61.025 60.000 0.00 0.00 0.00 4.79
442 443 0.321298 ACAGGGGATTCAAACGGACG 60.321 55.000 0.00 0.00 0.00 4.79
443 444 1.539827 CAACAGGGGATTCAAACGGAC 59.460 52.381 0.00 0.00 0.00 4.79
444 445 1.546773 CCAACAGGGGATTCAAACGGA 60.547 52.381 0.00 0.00 0.00 4.69
445 446 0.887933 CCAACAGGGGATTCAAACGG 59.112 55.000 0.00 0.00 0.00 4.44
446 447 1.812571 CTCCAACAGGGGATTCAAACG 59.187 52.381 0.00 0.00 36.09 3.60
447 448 2.876581 ACTCCAACAGGGGATTCAAAC 58.123 47.619 0.00 0.00 36.09 2.93
448 449 3.230134 CAACTCCAACAGGGGATTCAAA 58.770 45.455 0.00 0.00 36.09 2.69
449 450 2.875296 CAACTCCAACAGGGGATTCAA 58.125 47.619 0.00 0.00 36.09 2.69
450 451 1.547675 GCAACTCCAACAGGGGATTCA 60.548 52.381 0.00 0.00 36.09 2.57
451 452 1.177401 GCAACTCCAACAGGGGATTC 58.823 55.000 0.00 0.00 36.09 2.52
452 453 0.779997 AGCAACTCCAACAGGGGATT 59.220 50.000 0.00 0.00 36.09 3.01
453 454 0.329596 GAGCAACTCCAACAGGGGAT 59.670 55.000 0.00 0.00 36.09 3.85
454 455 1.761174 GAGCAACTCCAACAGGGGA 59.239 57.895 0.00 0.00 37.22 4.81
455 456 4.404691 GAGCAACTCCAACAGGGG 57.595 61.111 0.00 0.00 37.22 4.79
464 465 3.393089 TGAGAGTTCTTGGAGCAACTC 57.607 47.619 4.60 4.60 46.10 3.01
465 466 3.072184 ACATGAGAGTTCTTGGAGCAACT 59.928 43.478 0.00 0.00 35.48 3.16
466 467 3.406764 ACATGAGAGTTCTTGGAGCAAC 58.593 45.455 0.00 0.00 33.88 4.17
467 468 3.071457 TGACATGAGAGTTCTTGGAGCAA 59.929 43.478 0.00 0.00 33.88 3.91
468 469 2.634453 TGACATGAGAGTTCTTGGAGCA 59.366 45.455 0.00 0.00 33.88 4.26
469 470 2.999355 GTGACATGAGAGTTCTTGGAGC 59.001 50.000 0.00 0.00 33.88 4.70
470 471 3.249091 CGTGACATGAGAGTTCTTGGAG 58.751 50.000 0.00 0.00 33.88 3.86
471 472 2.628178 ACGTGACATGAGAGTTCTTGGA 59.372 45.455 0.00 0.00 33.88 3.53
472 473 2.733552 CACGTGACATGAGAGTTCTTGG 59.266 50.000 10.90 0.00 33.88 3.61
473 474 2.156504 GCACGTGACATGAGAGTTCTTG 59.843 50.000 22.23 0.00 35.28 3.02
474 475 2.408050 GCACGTGACATGAGAGTTCTT 58.592 47.619 22.23 0.00 0.00 2.52
475 476 1.667177 CGCACGTGACATGAGAGTTCT 60.667 52.381 22.23 0.00 0.00 3.01
476 477 0.710567 CGCACGTGACATGAGAGTTC 59.289 55.000 22.23 0.00 0.00 3.01
477 478 0.032130 ACGCACGTGACATGAGAGTT 59.968 50.000 22.23 0.00 0.00 3.01
478 479 0.387367 GACGCACGTGACATGAGAGT 60.387 55.000 22.23 1.01 0.00 3.24
479 480 1.398762 CGACGCACGTGACATGAGAG 61.399 60.000 22.23 0.00 37.22 3.20
480 481 1.442017 CGACGCACGTGACATGAGA 60.442 57.895 22.23 0.00 37.22 3.27
481 482 0.798389 ATCGACGCACGTGACATGAG 60.798 55.000 22.23 4.79 43.13 2.90
482 483 1.070471 CATCGACGCACGTGACATGA 61.070 55.000 22.23 11.50 43.13 3.07
483 484 1.070471 TCATCGACGCACGTGACATG 61.070 55.000 22.23 12.28 43.13 3.21
484 485 0.388006 TTCATCGACGCACGTGACAT 60.388 50.000 22.23 2.49 43.13 3.06
485 486 1.008309 TTCATCGACGCACGTGACA 60.008 52.632 22.23 0.00 43.13 3.58
486 487 1.002250 AGTTCATCGACGCACGTGAC 61.002 55.000 22.23 9.90 43.13 3.67
487 488 0.518195 TAGTTCATCGACGCACGTGA 59.482 50.000 22.23 0.00 43.13 4.35
488 489 0.633733 GTAGTTCATCGACGCACGTG 59.366 55.000 12.28 12.28 43.13 4.49
489 490 0.455633 GGTAGTTCATCGACGCACGT 60.456 55.000 0.00 0.00 43.13 4.49
490 491 0.179171 AGGTAGTTCATCGACGCACG 60.179 55.000 0.00 0.00 44.09 5.34
491 492 2.448219 GTAGGTAGTTCATCGACGCAC 58.552 52.381 0.00 0.00 0.00 5.34
492 493 1.063027 CGTAGGTAGTTCATCGACGCA 59.937 52.381 0.00 0.00 0.00 5.24
493 494 1.739618 CGTAGGTAGTTCATCGACGC 58.260 55.000 0.00 0.00 0.00 5.19
494 495 1.329906 AGCGTAGGTAGTTCATCGACG 59.670 52.381 0.00 0.00 35.08 5.12
495 496 2.097142 ACAGCGTAGGTAGTTCATCGAC 59.903 50.000 0.00 0.00 35.08 4.20
496 497 2.362736 ACAGCGTAGGTAGTTCATCGA 58.637 47.619 0.00 0.00 35.08 3.59
497 498 2.846039 ACAGCGTAGGTAGTTCATCG 57.154 50.000 0.00 0.00 35.08 3.84
498 499 5.857822 AAAAACAGCGTAGGTAGTTCATC 57.142 39.130 0.00 0.00 35.08 2.92
499 500 6.128742 CGTTAAAAACAGCGTAGGTAGTTCAT 60.129 38.462 0.00 0.00 35.08 2.57
500 501 5.175491 CGTTAAAAACAGCGTAGGTAGTTCA 59.825 40.000 0.00 0.00 35.08 3.18
501 502 5.175673 ACGTTAAAAACAGCGTAGGTAGTTC 59.824 40.000 0.00 0.00 35.08 3.01
502 503 5.049828 ACGTTAAAAACAGCGTAGGTAGTT 58.950 37.500 0.00 0.00 35.08 2.24
503 504 4.620982 ACGTTAAAAACAGCGTAGGTAGT 58.379 39.130 0.00 0.00 35.08 2.73
504 505 5.368374 CAACGTTAAAAACAGCGTAGGTAG 58.632 41.667 0.00 0.00 34.07 3.18
505 506 4.318689 GCAACGTTAAAAACAGCGTAGGTA 60.319 41.667 0.00 0.00 34.07 3.08
506 507 3.546616 GCAACGTTAAAAACAGCGTAGGT 60.547 43.478 0.00 0.00 34.07 3.08
507 508 2.968655 GCAACGTTAAAAACAGCGTAGG 59.031 45.455 0.00 0.00 34.07 3.18
508 509 3.609475 TGCAACGTTAAAAACAGCGTAG 58.391 40.909 0.00 0.00 34.07 3.51
509 510 3.670311 TGCAACGTTAAAAACAGCGTA 57.330 38.095 0.00 0.00 34.07 4.42
510 511 2.546195 TGCAACGTTAAAAACAGCGT 57.454 40.000 0.00 0.00 36.91 5.07
511 512 2.152868 CCATGCAACGTTAAAAACAGCG 59.847 45.455 0.00 0.00 0.00 5.18
512 513 3.376540 TCCATGCAACGTTAAAAACAGC 58.623 40.909 0.00 0.00 0.00 4.40
513 514 7.328249 ACAATATCCATGCAACGTTAAAAACAG 59.672 33.333 0.00 0.00 0.00 3.16
514 515 7.115520 CACAATATCCATGCAACGTTAAAAACA 59.884 33.333 0.00 0.00 0.00 2.83
515 516 7.411372 CCACAATATCCATGCAACGTTAAAAAC 60.411 37.037 0.00 0.00 0.00 2.43
516 517 6.587990 CCACAATATCCATGCAACGTTAAAAA 59.412 34.615 0.00 0.00 0.00 1.94
517 518 6.096036 CCACAATATCCATGCAACGTTAAAA 58.904 36.000 0.00 0.00 0.00 1.52
518 519 5.184096 ACCACAATATCCATGCAACGTTAAA 59.816 36.000 0.00 0.00 0.00 1.52
519 520 4.702612 ACCACAATATCCATGCAACGTTAA 59.297 37.500 0.00 0.00 0.00 2.01
520 521 4.265893 ACCACAATATCCATGCAACGTTA 58.734 39.130 0.00 0.00 0.00 3.18
556 557 1.151668 GCGTCCATCCATAGTCATGC 58.848 55.000 0.00 0.00 0.00 4.06
557 558 1.269778 ACGCGTCCATCCATAGTCATG 60.270 52.381 5.58 0.00 0.00 3.07
558 559 1.000163 GACGCGTCCATCCATAGTCAT 60.000 52.381 28.61 0.00 0.00 3.06
559 560 0.384309 GACGCGTCCATCCATAGTCA 59.616 55.000 28.61 0.00 0.00 3.41
560 561 3.180984 GACGCGTCCATCCATAGTC 57.819 57.895 28.61 0.00 0.00 2.59
575 576 4.752879 AATGTGACCCCGCGGACG 62.753 66.667 30.73 19.09 39.67 4.79
576 577 2.359478 AAATGTGACCCCGCGGAC 60.359 61.111 30.73 17.95 0.00 4.79
577 578 2.359354 CAAATGTGACCCCGCGGA 60.359 61.111 30.73 5.29 0.00 5.54
578 579 4.114997 GCAAATGTGACCCCGCGG 62.115 66.667 21.04 21.04 0.00 6.46
579 580 3.326889 CTGCAAATGTGACCCCGCG 62.327 63.158 0.00 0.00 0.00 6.46
580 581 2.568090 CTGCAAATGTGACCCCGC 59.432 61.111 0.00 0.00 0.00 6.13
581 582 1.973281 AGCTGCAAATGTGACCCCG 60.973 57.895 1.02 0.00 0.00 5.73
582 583 1.181098 ACAGCTGCAAATGTGACCCC 61.181 55.000 15.27 0.00 0.00 4.95
583 584 1.470098 CTACAGCTGCAAATGTGACCC 59.530 52.381 15.27 0.00 0.00 4.46
584 585 2.426522 TCTACAGCTGCAAATGTGACC 58.573 47.619 15.27 0.00 0.00 4.02
585 586 3.730061 GCATCTACAGCTGCAAATGTGAC 60.730 47.826 15.27 0.00 37.16 3.67
586 587 2.421073 GCATCTACAGCTGCAAATGTGA 59.579 45.455 15.27 8.79 37.16 3.58
587 588 2.422479 AGCATCTACAGCTGCAAATGTG 59.578 45.455 15.27 6.83 41.61 3.21
588 589 2.719739 AGCATCTACAGCTGCAAATGT 58.280 42.857 15.27 8.38 41.61 2.71
630 631 1.153686 GGTTTAGTCCGGTCGAGCC 60.154 63.158 9.39 1.35 0.00 4.70
827 834 4.547367 GTGGAATCGGAGGCGGGG 62.547 72.222 0.00 0.00 0.00 5.73
828 835 4.891727 CGTGGAATCGGAGGCGGG 62.892 72.222 0.00 0.00 0.00 6.13
831 838 4.162690 AGGCGTGGAATCGGAGGC 62.163 66.667 0.00 0.00 0.00 4.70
832 839 2.107141 GAGGCGTGGAATCGGAGG 59.893 66.667 0.00 0.00 0.00 4.30
907 946 3.114616 CTCTGTGGTCAAGCGCGG 61.115 66.667 8.83 0.00 0.00 6.46
1201 1240 1.142688 AAGGGCTGGACCTGGAACAT 61.143 55.000 0.00 0.00 40.87 2.71
1624 1663 1.228737 GCCTGGGGTTAAGGTGCAA 60.229 57.895 0.00 0.00 37.13 4.08
1870 1913 6.092122 CGATTTACCTCTGCACTAATTTGACA 59.908 38.462 0.00 0.00 0.00 3.58
1937 1980 8.440833 GCTGTAATGGTTAACTAGTAAGTTGTG 58.559 37.037 5.42 0.00 45.63 3.33
2280 2331 7.334858 TGCAGTTACATATGGTAGACATCAAA 58.665 34.615 7.80 0.00 41.03 2.69
2382 2437 1.336755 ACACTTGCCGGAACATGAAAC 59.663 47.619 5.05 0.00 0.00 2.78
2389 2444 2.863401 AAAAGAACACTTGCCGGAAC 57.137 45.000 5.05 0.00 0.00 3.62
2796 2852 5.995055 CATGAAGTTGTCTTGGACTCTTTC 58.005 41.667 0.00 1.99 33.64 2.62
3054 3111 4.041567 TGCATCTTCAAGAGTGAAACCCTA 59.958 41.667 0.00 0.00 43.18 3.53
3059 3116 4.276678 CCTGTTGCATCTTCAAGAGTGAAA 59.723 41.667 0.00 0.00 43.18 2.69
3444 3549 6.914215 CCAAACTACACAATGATCATGCATAC 59.086 38.462 9.46 0.00 0.00 2.39
3446 3551 5.163488 CCCAAACTACACAATGATCATGCAT 60.163 40.000 9.46 0.00 0.00 3.96
3555 3660 4.202161 ACAGTAGATAGCCAACAGAATCCG 60.202 45.833 0.00 0.00 0.00 4.18
3580 3685 4.144297 AGCACTCAAAAAGCATGAAGGTA 58.856 39.130 0.00 0.00 0.00 3.08
3622 3963 7.807977 ACAATATAAGTTTGGTGGAGCTATG 57.192 36.000 0.00 0.00 0.00 2.23
3717 4215 2.091541 CGTTGGGTGCATCTGGTTAAT 58.908 47.619 0.00 0.00 0.00 1.40
3736 4234 5.775686 ACATGCAAATGATATTTCCCATCG 58.224 37.500 0.00 0.00 0.00 3.84
3751 4249 9.187996 TCCTTTATGAGATGATAAACATGCAAA 57.812 29.630 0.00 0.00 39.56 3.68
3804 4302 6.028987 TGAACAACATTATGACATGCATTCG 58.971 36.000 0.00 0.00 38.44 3.34
3898 4396 6.795144 AATGGCAAAATGACAATATCTCCA 57.205 33.333 0.00 0.00 39.86 3.86
4028 4526 7.415765 CGAACCATAACAAATTACCAATAGGCA 60.416 37.037 0.00 0.00 39.06 4.75
4146 4644 3.883830 AACAGCTCTATCACCTCTGTG 57.116 47.619 0.00 0.00 44.18 3.66
4154 4652 5.643777 GGCTTAAGTTCAAACAGCTCTATCA 59.356 40.000 4.02 0.00 0.00 2.15
4387 4890 2.287788 GCAAGGTGACATGACAAACAGG 60.288 50.000 0.00 0.00 36.29 4.00
4578 5081 9.907229 CTTTGTTTTAAGGATAATACCTCCTCT 57.093 33.333 0.00 0.00 42.42 3.69
4658 5162 4.785346 AGACTAACTCATGGGATTGCAT 57.215 40.909 0.00 0.00 0.00 3.96
4773 5277 1.447099 TACCACCCTAAAGTTGGCCA 58.553 50.000 0.00 0.00 0.00 5.36
4789 5293 4.636206 CAGCCTTCCTATGTTTGAGTTACC 59.364 45.833 0.00 0.00 0.00 2.85
4790 5294 5.488341 TCAGCCTTCCTATGTTTGAGTTAC 58.512 41.667 0.00 0.00 0.00 2.50
4791 5295 5.755409 TCAGCCTTCCTATGTTTGAGTTA 57.245 39.130 0.00 0.00 0.00 2.24
4792 5296 4.640771 TCAGCCTTCCTATGTTTGAGTT 57.359 40.909 0.00 0.00 0.00 3.01
4793 5297 4.327680 GTTCAGCCTTCCTATGTTTGAGT 58.672 43.478 0.00 0.00 0.00 3.41
4794 5298 3.372206 CGTTCAGCCTTCCTATGTTTGAG 59.628 47.826 0.00 0.00 0.00 3.02
4795 5299 3.334691 CGTTCAGCCTTCCTATGTTTGA 58.665 45.455 0.00 0.00 0.00 2.69
4796 5300 2.420022 CCGTTCAGCCTTCCTATGTTTG 59.580 50.000 0.00 0.00 0.00 2.93
4797 5301 2.711542 CCGTTCAGCCTTCCTATGTTT 58.288 47.619 0.00 0.00 0.00 2.83
4798 5302 1.679032 GCCGTTCAGCCTTCCTATGTT 60.679 52.381 0.00 0.00 0.00 2.71
4799 5303 0.107654 GCCGTTCAGCCTTCCTATGT 60.108 55.000 0.00 0.00 0.00 2.29
4800 5304 2.695314 GCCGTTCAGCCTTCCTATG 58.305 57.895 0.00 0.00 0.00 2.23
4968 5472 3.252701 CCACTCCTGCATTCATTATGAGC 59.747 47.826 0.00 0.00 36.26 4.26
5045 5549 4.216257 AGACACAACGAATTTTGCTATGCT 59.784 37.500 0.00 0.00 0.00 3.79
5062 5566 1.271488 TGATTGGCATGCTGAGACACA 60.271 47.619 18.92 1.60 0.00 3.72
5154 5713 4.143986 AGCCAAATAGCCAGAGAAGTAC 57.856 45.455 0.00 0.00 0.00 2.73
5160 5719 1.404391 CTGCAAGCCAAATAGCCAGAG 59.596 52.381 0.00 0.00 0.00 3.35
5381 5940 8.893219 AATGAAAGATCGCATTTCACTATCTA 57.107 30.769 9.94 0.00 46.33 1.98
5391 5950 4.526970 CGAGTGAATGAAAGATCGCATT 57.473 40.909 10.06 10.06 37.43 3.56
5401 5960 1.270252 TGCTGACTGCGAGTGAATGAA 60.270 47.619 0.00 0.00 46.63 2.57
5512 6071 3.943381 CCTCAGCAATGTAAGCTCAATCA 59.057 43.478 0.00 0.00 41.14 2.57
5754 6317 2.714250 ACTTTAACACCATGGGGAGACA 59.286 45.455 24.27 0.26 38.05 3.41
5818 6381 3.826524 TGTAAAGGTGACAAGATTGGCA 58.173 40.909 0.00 0.00 45.70 4.92
5860 6423 3.117888 TGGACTGAAGGGAATAGCATTCC 60.118 47.826 15.57 15.57 37.86 3.01
5900 6463 1.822581 AGTTTGACTTGCGCGAAAAC 58.177 45.000 12.10 13.31 0.00 2.43
6118 6682 5.968676 ACTACCAAACATATTGCTCCCTA 57.031 39.130 0.00 0.00 0.00 3.53
6209 7085 2.851263 TTTAGACCTCCGCACACAAT 57.149 45.000 0.00 0.00 0.00 2.71
6221 7097 1.199097 CGTTGCACCCACATTTAGACC 59.801 52.381 0.00 0.00 0.00 3.85
6248 7124 2.811431 CCATTTAACGCCAGACAAGACA 59.189 45.455 0.00 0.00 0.00 3.41
6269 7145 4.873827 TGTATTTAACTCTGGTCGCAATCC 59.126 41.667 0.00 0.00 0.00 3.01
6272 7148 6.621316 TTTTGTATTTAACTCTGGTCGCAA 57.379 33.333 0.00 0.00 0.00 4.85
6293 7169 1.001520 GCCCTTATTGCGGTGGTTTTT 59.998 47.619 0.00 0.00 0.00 1.94
6366 7243 1.269936 CGTCAAAACACCCTACTCCGT 60.270 52.381 0.00 0.00 0.00 4.69
6368 7245 1.804601 CCGTCAAAACACCCTACTCC 58.195 55.000 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.