Multiple sequence alignment - TraesCS7D01G304000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G304000 chr7D 100.000 3487 0 0 1 3487 385698748 385702234 0.000000e+00 6440.0
1 TraesCS7D01G304000 chr7D 100.000 268 0 0 3736 4003 385702483 385702750 2.780000e-136 496.0
2 TraesCS7D01G304000 chr7D 75.388 516 105 12 51 550 202025187 202024678 3.110000e-56 230.0
3 TraesCS7D01G304000 chr7D 82.877 146 21 4 567 710 42060745 42060888 1.170000e-25 128.0
4 TraesCS7D01G304000 chr7A 93.677 1455 49 13 719 2139 433701055 433702500 0.000000e+00 2137.0
5 TraesCS7D01G304000 chr7A 95.762 1109 42 3 2154 3261 433702485 433703589 0.000000e+00 1783.0
6 TraesCS7D01G304000 chr7A 78.571 364 73 5 191 551 579736161 579735800 6.690000e-58 235.0
7 TraesCS7D01G304000 chr7B 93.333 1440 40 12 736 2139 380060269 380061688 0.000000e+00 2076.0
8 TraesCS7D01G304000 chr7B 95.860 1232 41 5 2154 3376 380061673 380062903 0.000000e+00 1984.0
9 TraesCS7D01G304000 chr2B 88.716 514 45 5 49 552 632699798 632700308 2.040000e-172 616.0
10 TraesCS7D01G304000 chr2B 82.716 162 25 1 551 712 635345906 635345748 1.500000e-29 141.0
11 TraesCS7D01G304000 chr2B 78.378 148 22 8 3339 3483 349926155 349926295 1.980000e-13 87.9
12 TraesCS7D01G304000 chr1B 86.497 511 53 5 49 551 343309133 343309635 7.560000e-152 547.0
13 TraesCS7D01G304000 chr2A 83.984 512 57 9 49 550 59751623 59752119 6.060000e-128 468.0
14 TraesCS7D01G304000 chr2A 81.065 169 21 7 551 710 125906069 125906235 1.510000e-24 124.0
15 TraesCS7D01G304000 chr2D 79.502 522 84 18 46 550 76817977 76818492 2.290000e-92 350.0
16 TraesCS7D01G304000 chr2D 75.048 517 108 11 51 551 318341091 318340580 1.870000e-53 220.0
17 TraesCS7D01G304000 chr2D 84.667 150 22 1 551 700 544568317 544568169 8.960000e-32 148.0
18 TraesCS7D01G304000 chr2D 84.677 124 18 1 591 714 534365286 534365164 5.430000e-24 122.0
19 TraesCS7D01G304000 chr6D 80.000 310 55 7 247 551 232118223 232118530 5.210000e-54 222.0
20 TraesCS7D01G304000 chr5D 75.641 468 94 10 99 551 441114232 441113770 8.710000e-52 215.0
21 TraesCS7D01G304000 chr1D 75.900 361 76 8 175 529 36618656 36619011 1.480000e-39 174.0
22 TraesCS7D01G304000 chr6A 84.028 144 22 1 566 709 210790134 210790276 1.940000e-28 137.0
23 TraesCS7D01G304000 chr6A 80.952 147 25 3 567 712 30037408 30037552 3.270000e-21 113.0
24 TraesCS7D01G304000 chr3D 84.028 144 20 3 567 710 7577462 7577602 6.980000e-28 135.0
25 TraesCS7D01G304000 chr3D 75.664 226 38 12 3757 3970 444799756 444799536 3.290000e-16 97.1
26 TraesCS7D01G304000 chr5A 81.507 146 25 2 567 712 523575446 523575303 7.030000e-23 119.0
27 TraesCS7D01G304000 chr4B 89.474 57 5 1 3738 3794 60420210 60420265 2.000000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G304000 chr7D 385698748 385702750 4002 False 3468 6440 100.0000 1 4003 2 chr7D.!!$F2 4002
1 TraesCS7D01G304000 chr7D 202024678 202025187 509 True 230 230 75.3880 51 550 1 chr7D.!!$R1 499
2 TraesCS7D01G304000 chr7A 433701055 433703589 2534 False 1960 2137 94.7195 719 3261 2 chr7A.!!$F1 2542
3 TraesCS7D01G304000 chr7B 380060269 380062903 2634 False 2030 2076 94.5965 736 3376 2 chr7B.!!$F1 2640
4 TraesCS7D01G304000 chr2B 632699798 632700308 510 False 616 616 88.7160 49 552 1 chr2B.!!$F2 503
5 TraesCS7D01G304000 chr1B 343309133 343309635 502 False 547 547 86.4970 49 551 1 chr1B.!!$F1 502
6 TraesCS7D01G304000 chr2D 76817977 76818492 515 False 350 350 79.5020 46 550 1 chr2D.!!$F1 504
7 TraesCS7D01G304000 chr2D 318340580 318341091 511 True 220 220 75.0480 51 551 1 chr2D.!!$R1 500

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
625 641 0.039074 GGTCGCTCGATGGTCCATAG 60.039 60.0 3.72 4.8 0.00 2.23 F
728 744 0.103208 AGAGAGGCGCGAGGTATTTG 59.897 55.0 12.10 0.0 0.00 2.32 F
1976 2031 0.183014 TTTGGCTTTGGGTGTACCGA 59.817 50.0 0.00 0.0 44.64 4.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1757 1812 1.153549 GCCGGAGACCTAGCTGTTG 60.154 63.158 5.05 0.00 0.00 3.33 R
2721 2784 0.043940 ACCTGGAGGCTCCTCTCATT 59.956 55.000 32.28 9.61 42.38 2.57 R
3352 3418 0.032017 ACCCTACCGAGAGATTGCCT 60.032 55.000 0.00 0.00 0.00 4.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.855105 GGCGGTGCACTCATATCA 57.145 55.556 17.98 0.00 0.00 2.15
18 19 2.609825 GGCGGTGCACTCATATCAG 58.390 57.895 17.98 0.00 0.00 2.90
19 20 0.104855 GGCGGTGCACTCATATCAGA 59.895 55.000 17.98 0.00 0.00 3.27
20 21 1.495878 GCGGTGCACTCATATCAGAG 58.504 55.000 17.98 0.00 41.44 3.35
21 22 1.067669 GCGGTGCACTCATATCAGAGA 59.932 52.381 17.98 0.00 38.98 3.10
22 23 2.736978 CGGTGCACTCATATCAGAGAC 58.263 52.381 17.98 0.00 38.98 3.36
23 24 2.099756 CGGTGCACTCATATCAGAGACA 59.900 50.000 17.98 0.00 38.98 3.41
24 25 3.429410 CGGTGCACTCATATCAGAGACAA 60.429 47.826 17.98 0.00 38.98 3.18
25 26 3.868077 GGTGCACTCATATCAGAGACAAC 59.132 47.826 17.98 0.00 38.98 3.32
26 27 3.868077 GTGCACTCATATCAGAGACAACC 59.132 47.826 10.32 0.00 38.98 3.77
27 28 3.771479 TGCACTCATATCAGAGACAACCT 59.229 43.478 0.00 0.00 38.98 3.50
28 29 4.118410 GCACTCATATCAGAGACAACCTG 58.882 47.826 0.00 0.00 38.98 4.00
29 30 4.118410 CACTCATATCAGAGACAACCTGC 58.882 47.826 0.00 0.00 38.98 4.85
30 31 3.181482 ACTCATATCAGAGACAACCTGCG 60.181 47.826 0.00 0.00 38.98 5.18
31 32 3.023832 TCATATCAGAGACAACCTGCGA 58.976 45.455 0.00 0.00 0.00 5.10
32 33 3.638627 TCATATCAGAGACAACCTGCGAT 59.361 43.478 0.00 0.00 0.00 4.58
33 34 2.306341 ATCAGAGACAACCTGCGATG 57.694 50.000 0.00 0.00 0.00 3.84
34 35 0.969149 TCAGAGACAACCTGCGATGT 59.031 50.000 0.00 0.00 0.00 3.06
35 36 1.067565 TCAGAGACAACCTGCGATGTC 60.068 52.381 0.00 0.00 44.92 3.06
37 38 4.571250 GACAACCTGCGATGTCGA 57.429 55.556 6.60 0.00 43.02 4.20
38 39 2.070861 GACAACCTGCGATGTCGAC 58.929 57.895 9.11 9.11 43.02 4.20
39 40 1.674611 GACAACCTGCGATGTCGACG 61.675 60.000 11.62 0.00 43.02 5.12
85 88 1.135489 GTCAATGCTGATGGTGCTGTG 60.135 52.381 0.00 0.00 33.05 3.66
184 195 0.469331 AGTGTCACAGACCCGGAAGA 60.469 55.000 0.73 0.00 0.00 2.87
212 223 2.157305 TTTTGGCATGCAAGAGGGCG 62.157 55.000 21.36 0.00 36.28 6.13
307 318 1.672881 CAATCAGCCATCGAAGAACCC 59.327 52.381 0.00 0.00 43.58 4.11
338 349 1.308216 CCCCTGGGTGGAGGAGATT 60.308 63.158 12.71 0.00 38.35 2.40
355 367 7.123397 GGAGGAGATTAAAAGCCTCTTGAATTT 59.877 37.037 15.95 0.00 44.91 1.82
417 429 6.749578 CACTAATGTTGCCGCACATAAATTTA 59.250 34.615 0.00 0.00 36.30 1.40
563 579 2.520968 AAAAAGGCCGGCTCCACT 59.479 55.556 28.56 12.32 0.00 4.00
564 580 1.765074 AAAAAGGCCGGCTCCACTA 59.235 52.632 28.56 0.00 0.00 2.74
565 581 0.331616 AAAAAGGCCGGCTCCACTAT 59.668 50.000 28.56 4.63 0.00 2.12
566 582 0.394352 AAAAGGCCGGCTCCACTATG 60.394 55.000 28.56 0.00 0.00 2.23
567 583 1.271840 AAAGGCCGGCTCCACTATGA 61.272 55.000 28.56 0.00 0.00 2.15
568 584 1.972660 AAGGCCGGCTCCACTATGAC 61.973 60.000 28.56 4.97 0.00 3.06
569 585 2.731571 GGCCGGCTCCACTATGACA 61.732 63.158 28.56 0.00 0.00 3.58
570 586 1.227380 GCCGGCTCCACTATGACAG 60.227 63.158 22.15 0.00 0.00 3.51
571 587 1.227380 CCGGCTCCACTATGACAGC 60.227 63.158 0.00 0.00 0.00 4.40
572 588 1.589993 CGGCTCCACTATGACAGCG 60.590 63.158 0.00 0.00 32.26 5.18
573 589 1.227380 GGCTCCACTATGACAGCGG 60.227 63.158 0.00 0.00 32.26 5.52
574 590 1.884926 GCTCCACTATGACAGCGGC 60.885 63.158 0.00 0.00 0.00 6.53
575 591 1.589993 CTCCACTATGACAGCGGCG 60.590 63.158 0.51 0.51 0.00 6.46
576 592 2.004808 CTCCACTATGACAGCGGCGA 62.005 60.000 12.98 0.00 0.00 5.54
577 593 1.878522 CCACTATGACAGCGGCGAC 60.879 63.158 12.98 1.23 0.00 5.19
596 612 4.719369 GCGACGGCTCGTTCTGGT 62.719 66.667 0.00 0.00 41.37 4.00
597 613 2.805353 CGACGGCTCGTTCTGGTG 60.805 66.667 1.80 0.00 41.37 4.17
598 614 2.432628 GACGGCTCGTTCTGGTGG 60.433 66.667 1.80 0.00 41.37 4.61
599 615 3.222354 GACGGCTCGTTCTGGTGGT 62.222 63.158 1.80 0.00 41.37 4.16
600 616 1.870055 GACGGCTCGTTCTGGTGGTA 61.870 60.000 1.80 0.00 41.37 3.25
601 617 1.153823 CGGCTCGTTCTGGTGGTAG 60.154 63.158 0.00 0.00 0.00 3.18
602 618 1.448013 GGCTCGTTCTGGTGGTAGC 60.448 63.158 0.00 0.00 0.00 3.58
603 619 1.292223 GCTCGTTCTGGTGGTAGCA 59.708 57.895 0.00 0.00 0.00 3.49
604 620 0.320421 GCTCGTTCTGGTGGTAGCAA 60.320 55.000 0.00 0.00 0.00 3.91
605 621 1.676014 GCTCGTTCTGGTGGTAGCAAT 60.676 52.381 0.00 0.00 0.00 3.56
606 622 2.002586 CTCGTTCTGGTGGTAGCAATG 58.997 52.381 0.00 0.00 0.00 2.82
607 623 1.086696 CGTTCTGGTGGTAGCAATGG 58.913 55.000 0.00 0.00 0.00 3.16
608 624 1.610624 CGTTCTGGTGGTAGCAATGGT 60.611 52.381 0.00 0.00 0.00 3.55
609 625 2.084546 GTTCTGGTGGTAGCAATGGTC 58.915 52.381 0.00 0.00 0.00 4.02
610 626 0.249120 TCTGGTGGTAGCAATGGTCG 59.751 55.000 0.00 0.00 0.00 4.79
611 627 1.369091 CTGGTGGTAGCAATGGTCGC 61.369 60.000 0.00 0.00 0.00 5.19
612 628 1.078426 GGTGGTAGCAATGGTCGCT 60.078 57.895 0.00 0.00 43.62 4.93
613 629 1.090052 GGTGGTAGCAATGGTCGCTC 61.090 60.000 0.00 0.00 40.96 5.03
614 630 1.153647 TGGTAGCAATGGTCGCTCG 60.154 57.895 0.00 0.00 40.96 5.03
615 631 1.141019 GGTAGCAATGGTCGCTCGA 59.859 57.895 0.00 0.00 40.96 4.04
616 632 0.249489 GGTAGCAATGGTCGCTCGAT 60.249 55.000 0.00 0.00 40.96 3.59
617 633 0.855349 GTAGCAATGGTCGCTCGATG 59.145 55.000 0.00 0.00 40.96 3.84
618 634 0.249447 TAGCAATGGTCGCTCGATGG 60.249 55.000 0.00 0.00 40.96 3.51
619 635 1.815421 GCAATGGTCGCTCGATGGT 60.815 57.895 0.00 0.00 0.00 3.55
620 636 1.766143 GCAATGGTCGCTCGATGGTC 61.766 60.000 0.00 0.00 0.00 4.02
621 637 1.144057 AATGGTCGCTCGATGGTCC 59.856 57.895 0.00 0.00 0.00 4.46
622 638 1.613317 AATGGTCGCTCGATGGTCCA 61.613 55.000 0.00 0.00 0.00 4.02
623 639 1.402896 ATGGTCGCTCGATGGTCCAT 61.403 55.000 3.26 3.26 0.00 3.41
624 640 0.753848 TGGTCGCTCGATGGTCCATA 60.754 55.000 3.72 0.00 0.00 2.74
625 641 0.039074 GGTCGCTCGATGGTCCATAG 60.039 60.000 3.72 4.80 0.00 2.23
626 642 0.952280 GTCGCTCGATGGTCCATAGA 59.048 55.000 13.42 13.42 0.00 1.98
627 643 0.952280 TCGCTCGATGGTCCATAGAC 59.048 55.000 10.39 7.33 42.73 2.59
642 658 7.923414 GTCCATAGACCTCAATGTAGTTTTT 57.077 36.000 0.00 0.00 37.00 1.94
644 660 9.614792 GTCCATAGACCTCAATGTAGTTTTTAT 57.385 33.333 0.00 0.00 37.00 1.40
650 666 9.686683 AGACCTCAATGTAGTTTTTATTATGCT 57.313 29.630 0.00 0.00 0.00 3.79
669 685 9.793252 ATTATGCTTGATGTGATTTGTACTTTC 57.207 29.630 0.00 0.00 0.00 2.62
670 686 5.688823 TGCTTGATGTGATTTGTACTTTCG 58.311 37.500 0.00 0.00 0.00 3.46
671 687 5.468409 TGCTTGATGTGATTTGTACTTTCGA 59.532 36.000 0.00 0.00 0.00 3.71
672 688 6.149308 TGCTTGATGTGATTTGTACTTTCGAT 59.851 34.615 0.00 0.00 0.00 3.59
673 689 6.467047 GCTTGATGTGATTTGTACTTTCGATG 59.533 38.462 0.00 0.00 0.00 3.84
674 690 7.624134 GCTTGATGTGATTTGTACTTTCGATGA 60.624 37.037 0.00 0.00 0.00 2.92
675 691 7.665561 TGATGTGATTTGTACTTTCGATGAA 57.334 32.000 0.00 0.00 0.00 2.57
676 692 8.267620 TGATGTGATTTGTACTTTCGATGAAT 57.732 30.769 0.00 0.00 0.00 2.57
677 693 8.390354 TGATGTGATTTGTACTTTCGATGAATC 58.610 33.333 0.00 0.00 0.00 2.52
678 694 7.905604 TGTGATTTGTACTTTCGATGAATCT 57.094 32.000 0.00 0.00 0.00 2.40
679 695 8.322906 TGTGATTTGTACTTTCGATGAATCTT 57.677 30.769 0.00 0.00 0.00 2.40
680 696 8.783093 TGTGATTTGTACTTTCGATGAATCTTT 58.217 29.630 0.00 0.00 0.00 2.52
722 738 4.285851 AAAAAGAGAGGCGCGAGG 57.714 55.556 12.10 0.00 0.00 4.63
723 739 1.371558 AAAAAGAGAGGCGCGAGGT 59.628 52.632 12.10 0.00 0.00 3.85
724 740 0.606604 AAAAAGAGAGGCGCGAGGTA 59.393 50.000 12.10 0.00 0.00 3.08
725 741 0.824759 AAAAGAGAGGCGCGAGGTAT 59.175 50.000 12.10 0.00 0.00 2.73
726 742 0.824759 AAAGAGAGGCGCGAGGTATT 59.175 50.000 12.10 0.00 0.00 1.89
727 743 0.824759 AAGAGAGGCGCGAGGTATTT 59.175 50.000 12.10 0.00 0.00 1.40
728 744 0.103208 AGAGAGGCGCGAGGTATTTG 59.897 55.000 12.10 0.00 0.00 2.32
729 745 1.491505 GAGAGGCGCGAGGTATTTGC 61.492 60.000 12.10 0.00 0.00 3.68
730 746 2.513897 AGGCGCGAGGTATTTGCC 60.514 61.111 12.10 0.00 46.07 4.52
731 747 3.937062 GGCGCGAGGTATTTGCCG 61.937 66.667 12.10 0.00 35.77 5.69
732 748 3.192922 GCGCGAGGTATTTGCCGT 61.193 61.111 12.10 0.00 32.04 5.68
733 749 3.003478 CGCGAGGTATTTGCCGTC 58.997 61.111 0.00 0.00 32.04 4.79
734 750 2.856346 CGCGAGGTATTTGCCGTCG 61.856 63.158 0.00 0.00 34.59 5.12
775 791 6.126768 TGTTTATGGATAGCTGCCTTCTAACT 60.127 38.462 0.00 0.00 0.00 2.24
817 833 2.676471 GGCCAATCCGCACCAACT 60.676 61.111 0.00 0.00 0.00 3.16
915 932 2.229589 CGCAGCAGAGCAGATCGAC 61.230 63.158 0.00 0.00 0.00 4.20
1106 1123 2.743126 CGTCTCTTACCGTCTCAGTCTT 59.257 50.000 0.00 0.00 0.00 3.01
1310 1359 1.623811 GAGCCCGGGCATCTATTTCTA 59.376 52.381 45.13 0.00 44.88 2.10
1378 1432 4.589908 TCTTGAAATCCAACTAGAAGCCC 58.410 43.478 0.00 0.00 0.00 5.19
1389 1443 4.917906 ACTAGAAGCCCTTGTGAATTCT 57.082 40.909 7.05 0.00 34.71 2.40
1391 1445 3.515602 AGAAGCCCTTGTGAATTCTGT 57.484 42.857 7.05 0.00 0.00 3.41
1507 1562 3.119637 GCTTAATTAGCGTCCTGGCAAAA 60.120 43.478 0.00 0.00 40.71 2.44
1720 1775 5.003692 TGTTTGTGAACATGCAAAAGCTA 57.996 34.783 0.00 0.00 40.71 3.32
1757 1812 5.643379 TCAGAATAAGAAATGTGCAACCC 57.357 39.130 0.00 0.00 34.36 4.11
1873 1928 4.662468 TGATCCTGTCATTGTAGCTCTC 57.338 45.455 0.00 0.00 0.00 3.20
1914 1969 6.494893 TTTAATTTGCGTGTATTCTGCTCT 57.505 33.333 0.00 0.00 0.00 4.09
1976 2031 0.183014 TTTGGCTTTGGGTGTACCGA 59.817 50.000 0.00 0.00 44.64 4.69
2158 2214 2.520500 TTTTTGCGAGGGCCTGCA 60.521 55.556 21.60 21.60 39.81 4.41
2159 2215 2.563798 TTTTTGCGAGGGCCTGCAG 61.564 57.895 23.31 6.78 42.89 4.41
2160 2216 2.974692 TTTTTGCGAGGGCCTGCAGA 62.975 55.000 23.31 18.89 42.89 4.26
2161 2217 2.974692 TTTTGCGAGGGCCTGCAGAA 62.975 55.000 23.31 22.33 42.89 3.02
2162 2218 3.907260 TTGCGAGGGCCTGCAGAAG 62.907 63.158 23.31 0.00 42.89 2.85
2290 2346 6.055588 AGAAAGTTTCAAATCGAGAGGTCAA 58.944 36.000 17.65 0.00 0.00 3.18
2410 2473 9.601217 AGTATTACTAACATGTCATCCTTGAAC 57.399 33.333 0.00 0.00 32.48 3.18
2419 2482 7.215789 ACATGTCATCCTTGAACTATCTCATC 58.784 38.462 0.00 0.00 32.48 2.92
2494 2557 2.232941 CCAGCAAGGCATCAAATCTTGT 59.767 45.455 0.00 0.00 39.80 3.16
2544 2607 6.017687 TGCTCTGCAGTACATAAAAGCATATG 60.018 38.462 15.98 0.00 35.50 1.78
2693 2756 3.470888 CCCAGCTACCCACCTCCG 61.471 72.222 0.00 0.00 0.00 4.63
2721 2784 2.554142 CCTTCGACATGCTCATTGCTA 58.446 47.619 0.00 0.00 43.37 3.49
2742 2805 0.937441 TGAGAGGAGCCTCCAGGTAT 59.063 55.000 14.46 0.00 43.70 2.73
2936 2999 1.237285 GCAGTGGTGCCATTTCGACT 61.237 55.000 0.00 0.00 44.72 4.18
2943 3006 0.107643 TGCCATTTCGACTGGTGTGA 59.892 50.000 13.33 0.00 36.10 3.58
3008 3071 2.548057 CGCCTTTACTTTGTGAGCTTGA 59.452 45.455 0.00 0.00 0.00 3.02
3014 3077 2.923121 ACTTTGTGAGCTTGAGCAGAA 58.077 42.857 5.70 0.00 45.16 3.02
3097 3160 2.599082 GTCTCTACTTCACCGCAATTCG 59.401 50.000 0.00 0.00 38.08 3.34
3141 3205 8.884726 GTGATTTCTGTAAGGACTAAAAGGATC 58.115 37.037 0.00 0.00 0.00 3.36
3169 3233 3.961477 TCAACATTTGTGACAACGAGG 57.039 42.857 0.00 0.00 0.00 4.63
3295 3360 5.236478 AGACAAAACTTACATCGTCCACAAG 59.764 40.000 0.00 0.00 0.00 3.16
3317 3382 5.312079 AGATTAGCAAATAAGCAGCTAGGG 58.688 41.667 0.00 0.00 41.38 3.53
3340 3406 4.939439 GGACATTGTCCCAAGTATAACGTT 59.061 41.667 23.00 5.88 46.19 3.99
3352 3418 6.537301 CCAAGTATAACGTTGGAGCTAAATCA 59.463 38.462 11.99 0.00 45.35 2.57
3369 3435 1.403814 TCAGGCAATCTCTCGGTAGG 58.596 55.000 0.00 0.00 0.00 3.18
3376 3442 3.768878 CAATCTCTCGGTAGGGTATCCT 58.231 50.000 0.00 0.00 46.96 3.24
3377 3443 2.953284 TCTCTCGGTAGGGTATCCTG 57.047 55.000 4.22 0.00 44.61 3.86
3378 3444 1.424302 TCTCTCGGTAGGGTATCCTGG 59.576 57.143 4.22 0.00 44.61 4.45
3379 3445 0.178970 TCTCGGTAGGGTATCCTGGC 60.179 60.000 4.22 0.00 44.61 4.85
3380 3446 0.178958 CTCGGTAGGGTATCCTGGCT 60.179 60.000 4.22 0.00 44.61 4.75
3381 3447 1.075050 CTCGGTAGGGTATCCTGGCTA 59.925 57.143 4.22 0.00 44.61 3.93
3382 3448 1.075050 TCGGTAGGGTATCCTGGCTAG 59.925 57.143 4.22 0.00 44.61 3.42
3383 3449 1.891450 CGGTAGGGTATCCTGGCTAGG 60.891 61.905 10.47 10.47 44.61 3.02
3384 3450 1.268066 GTAGGGTATCCTGGCTAGGC 58.732 60.000 12.10 9.85 44.61 3.93
3385 3451 0.251653 TAGGGTATCCTGGCTAGGCG 60.252 60.000 12.10 6.49 44.61 5.52
3386 3452 1.533273 GGGTATCCTGGCTAGGCGA 60.533 63.158 12.10 4.01 44.22 5.54
3387 3453 0.905337 GGGTATCCTGGCTAGGCGAT 60.905 60.000 12.10 11.33 44.22 4.58
3388 3454 0.977395 GGTATCCTGGCTAGGCGATT 59.023 55.000 12.10 0.00 44.22 3.34
3389 3455 1.338200 GGTATCCTGGCTAGGCGATTG 60.338 57.143 12.10 1.92 44.22 2.67
3390 3456 0.976641 TATCCTGGCTAGGCGATTGG 59.023 55.000 12.10 10.85 44.22 3.16
3391 3457 1.772819 ATCCTGGCTAGGCGATTGGG 61.773 60.000 12.10 8.47 44.22 4.12
3392 3458 2.592861 CTGGCTAGGCGATTGGGC 60.593 66.667 12.19 0.00 42.69 5.36
3399 3465 2.908940 GGCGATTGGGCTGGATGG 60.909 66.667 0.00 0.00 38.40 3.51
3400 3466 2.192979 GCGATTGGGCTGGATGGA 59.807 61.111 0.00 0.00 0.00 3.41
3401 3467 2.189499 GCGATTGGGCTGGATGGAC 61.189 63.158 0.00 0.00 0.00 4.02
3402 3468 1.889105 CGATTGGGCTGGATGGACG 60.889 63.158 0.00 0.00 0.00 4.79
3403 3469 1.526917 GATTGGGCTGGATGGACGG 60.527 63.158 0.00 0.00 0.00 4.79
3404 3470 2.270874 GATTGGGCTGGATGGACGGT 62.271 60.000 0.00 0.00 0.00 4.83
3405 3471 0.986019 ATTGGGCTGGATGGACGGTA 60.986 55.000 0.00 0.00 0.00 4.02
3406 3472 1.202099 TTGGGCTGGATGGACGGTAA 61.202 55.000 0.00 0.00 0.00 2.85
3407 3473 1.153229 GGGCTGGATGGACGGTAAC 60.153 63.158 0.00 0.00 0.00 2.50
3408 3474 1.600107 GGCTGGATGGACGGTAACA 59.400 57.895 0.00 0.00 0.00 2.41
3409 3475 0.743345 GGCTGGATGGACGGTAACAC 60.743 60.000 0.00 0.00 0.00 3.32
3410 3476 0.249398 GCTGGATGGACGGTAACACT 59.751 55.000 0.00 0.00 0.00 3.55
3411 3477 1.479323 GCTGGATGGACGGTAACACTA 59.521 52.381 0.00 0.00 0.00 2.74
3412 3478 2.481449 GCTGGATGGACGGTAACACTAG 60.481 54.545 0.00 0.00 0.00 2.57
3413 3479 2.100916 CTGGATGGACGGTAACACTAGG 59.899 54.545 0.00 0.00 0.00 3.02
3414 3480 1.202498 GGATGGACGGTAACACTAGGC 60.202 57.143 0.00 0.00 0.00 3.93
3415 3481 1.479323 GATGGACGGTAACACTAGGCA 59.521 52.381 0.00 0.00 0.00 4.75
3416 3482 1.340088 TGGACGGTAACACTAGGCAA 58.660 50.000 0.00 0.00 0.00 4.52
3417 3483 1.274167 TGGACGGTAACACTAGGCAAG 59.726 52.381 0.00 0.00 0.00 4.01
3418 3484 1.547372 GGACGGTAACACTAGGCAAGA 59.453 52.381 0.00 0.00 0.00 3.02
3419 3485 2.603953 GACGGTAACACTAGGCAAGAC 58.396 52.381 0.00 0.00 0.00 3.01
3420 3486 2.230750 GACGGTAACACTAGGCAAGACT 59.769 50.000 0.00 0.00 0.00 3.24
3421 3487 2.631545 ACGGTAACACTAGGCAAGACTT 59.368 45.455 0.00 0.00 0.00 3.01
3422 3488 3.070590 ACGGTAACACTAGGCAAGACTTT 59.929 43.478 0.00 0.00 0.00 2.66
3423 3489 4.281688 ACGGTAACACTAGGCAAGACTTTA 59.718 41.667 0.00 0.00 0.00 1.85
3424 3490 4.624452 CGGTAACACTAGGCAAGACTTTAC 59.376 45.833 0.00 0.00 0.00 2.01
3425 3491 4.934001 GGTAACACTAGGCAAGACTTTACC 59.066 45.833 0.00 0.00 33.89 2.85
3426 3492 3.697619 ACACTAGGCAAGACTTTACCC 57.302 47.619 0.00 0.00 0.00 3.69
3427 3493 2.976882 ACACTAGGCAAGACTTTACCCA 59.023 45.455 0.00 0.00 0.00 4.51
3428 3494 3.008049 ACACTAGGCAAGACTTTACCCAG 59.992 47.826 0.00 0.38 0.00 4.45
3429 3495 2.572104 ACTAGGCAAGACTTTACCCAGG 59.428 50.000 0.00 0.00 0.00 4.45
3430 3496 1.446016 AGGCAAGACTTTACCCAGGT 58.554 50.000 0.00 0.00 0.00 4.00
3431 3497 1.780919 AGGCAAGACTTTACCCAGGTT 59.219 47.619 0.00 0.00 0.00 3.50
3432 3498 2.160205 GGCAAGACTTTACCCAGGTTC 58.840 52.381 0.00 0.00 0.00 3.62
3433 3499 1.804748 GCAAGACTTTACCCAGGTTCG 59.195 52.381 0.00 0.00 0.00 3.95
3434 3500 2.423577 CAAGACTTTACCCAGGTTCGG 58.576 52.381 0.00 0.00 0.00 4.30
3442 3508 4.410400 CCAGGTTCGGGCCCTCAC 62.410 72.222 22.43 16.02 0.00 3.51
3443 3509 4.760047 CAGGTTCGGGCCCTCACG 62.760 72.222 22.43 6.49 0.00 4.35
3446 3512 4.754667 GTTCGGGCCCTCACGGTC 62.755 72.222 22.43 0.00 34.35 4.79
3451 3517 3.148279 GGCCCTCACGGTCGAGAT 61.148 66.667 0.00 0.00 34.79 2.75
3452 3518 1.826921 GGCCCTCACGGTCGAGATA 60.827 63.158 0.00 0.00 34.79 1.98
3453 3519 1.389609 GGCCCTCACGGTCGAGATAA 61.390 60.000 0.00 0.00 34.79 1.75
3454 3520 0.674534 GCCCTCACGGTCGAGATAAT 59.325 55.000 8.53 0.00 34.79 1.28
3455 3521 1.884579 GCCCTCACGGTCGAGATAATA 59.115 52.381 8.53 0.00 34.79 0.98
3456 3522 2.351544 GCCCTCACGGTCGAGATAATAC 60.352 54.545 8.53 0.00 34.79 1.89
3457 3523 3.147629 CCCTCACGGTCGAGATAATACT 58.852 50.000 8.53 0.00 34.79 2.12
3458 3524 3.188873 CCCTCACGGTCGAGATAATACTC 59.811 52.174 8.53 0.00 34.79 2.59
3459 3525 4.066490 CCTCACGGTCGAGATAATACTCT 58.934 47.826 8.53 0.00 34.79 3.24
3460 3526 5.236282 CCTCACGGTCGAGATAATACTCTA 58.764 45.833 8.53 0.00 34.79 2.43
3461 3527 5.120519 CCTCACGGTCGAGATAATACTCTAC 59.879 48.000 8.53 0.00 34.79 2.59
3462 3528 5.851720 TCACGGTCGAGATAATACTCTACT 58.148 41.667 0.00 0.00 34.48 2.57
3463 3529 5.925397 TCACGGTCGAGATAATACTCTACTC 59.075 44.000 0.00 0.00 34.48 2.59
3464 3530 5.120519 CACGGTCGAGATAATACTCTACTCC 59.879 48.000 0.00 0.00 34.48 3.85
3465 3531 5.011943 ACGGTCGAGATAATACTCTACTCCT 59.988 44.000 0.00 0.00 34.48 3.69
3466 3532 5.349270 CGGTCGAGATAATACTCTACTCCTG 59.651 48.000 0.00 0.00 34.48 3.86
3467 3533 5.122711 GGTCGAGATAATACTCTACTCCTGC 59.877 48.000 0.00 0.00 34.48 4.85
3468 3534 5.935789 GTCGAGATAATACTCTACTCCTGCT 59.064 44.000 0.00 0.00 35.06 4.24
3469 3535 6.428771 GTCGAGATAATACTCTACTCCTGCTT 59.571 42.308 0.00 0.00 35.06 3.91
3470 3536 6.428465 TCGAGATAATACTCTACTCCTGCTTG 59.572 42.308 0.00 0.00 35.06 4.01
3471 3537 6.205853 CGAGATAATACTCTACTCCTGCTTGT 59.794 42.308 0.00 0.00 35.06 3.16
3472 3538 7.283625 AGATAATACTCTACTCCTGCTTGTG 57.716 40.000 0.00 0.00 0.00 3.33
3473 3539 6.836527 AGATAATACTCTACTCCTGCTTGTGT 59.163 38.462 0.00 0.00 0.00 3.72
3474 3540 7.999545 AGATAATACTCTACTCCTGCTTGTGTA 59.000 37.037 0.00 0.00 0.00 2.90
3475 3541 8.713708 ATAATACTCTACTCCTGCTTGTGTAT 57.286 34.615 0.00 0.00 0.00 2.29
3476 3542 9.809395 ATAATACTCTACTCCTGCTTGTGTATA 57.191 33.333 0.00 0.00 0.00 1.47
3477 3543 8.713708 AATACTCTACTCCTGCTTGTGTATAT 57.286 34.615 0.00 0.00 0.00 0.86
3478 3544 8.713708 ATACTCTACTCCTGCTTGTGTATATT 57.286 34.615 0.00 0.00 0.00 1.28
3479 3545 6.810911 ACTCTACTCCTGCTTGTGTATATTG 58.189 40.000 0.00 0.00 0.00 1.90
3480 3546 5.601662 TCTACTCCTGCTTGTGTATATTGC 58.398 41.667 0.00 0.00 0.00 3.56
3481 3547 3.198068 ACTCCTGCTTGTGTATATTGCG 58.802 45.455 0.00 0.00 0.00 4.85
3482 3548 3.118775 ACTCCTGCTTGTGTATATTGCGA 60.119 43.478 0.00 0.00 0.00 5.10
3483 3549 3.457234 TCCTGCTTGTGTATATTGCGAG 58.543 45.455 0.00 0.00 0.00 5.03
3484 3550 2.545526 CCTGCTTGTGTATATTGCGAGG 59.454 50.000 0.00 0.00 0.00 4.63
3485 3551 2.545526 CTGCTTGTGTATATTGCGAGGG 59.454 50.000 0.00 0.00 0.00 4.30
3486 3552 1.873591 GCTTGTGTATATTGCGAGGGG 59.126 52.381 0.00 0.00 0.00 4.79
3757 3823 4.796110 ACCAAGGGATTGTATGTATGCT 57.204 40.909 0.00 0.00 0.00 3.79
3758 3824 5.904984 ACCAAGGGATTGTATGTATGCTA 57.095 39.130 0.00 0.00 0.00 3.49
3759 3825 6.454223 ACCAAGGGATTGTATGTATGCTAT 57.546 37.500 0.00 0.00 0.00 2.97
3760 3826 6.476378 ACCAAGGGATTGTATGTATGCTATC 58.524 40.000 0.00 0.00 0.00 2.08
3761 3827 5.582269 CCAAGGGATTGTATGTATGCTATCG 59.418 44.000 0.00 0.00 0.00 2.92
3762 3828 6.398095 CAAGGGATTGTATGTATGCTATCGA 58.602 40.000 0.00 0.00 0.00 3.59
3763 3829 5.967088 AGGGATTGTATGTATGCTATCGAC 58.033 41.667 0.00 0.00 0.00 4.20
3764 3830 4.798907 GGGATTGTATGTATGCTATCGACG 59.201 45.833 0.00 0.00 0.00 5.12
3765 3831 5.392703 GGGATTGTATGTATGCTATCGACGA 60.393 44.000 0.00 0.00 0.00 4.20
3766 3832 5.739630 GGATTGTATGTATGCTATCGACGAG 59.260 44.000 3.01 0.00 0.00 4.18
3767 3833 4.079665 TGTATGTATGCTATCGACGAGC 57.920 45.455 13.07 13.07 40.53 5.03
3768 3834 2.638556 ATGTATGCTATCGACGAGCC 57.361 50.000 16.37 4.38 39.30 4.70
3769 3835 0.596577 TGTATGCTATCGACGAGCCC 59.403 55.000 16.37 7.02 39.30 5.19
3770 3836 0.454620 GTATGCTATCGACGAGCCCG 60.455 60.000 16.37 0.00 39.30 6.13
3771 3837 0.604511 TATGCTATCGACGAGCCCGA 60.605 55.000 16.37 1.30 39.30 5.14
3772 3838 2.051166 GCTATCGACGAGCCCGAC 60.051 66.667 9.53 0.00 38.97 4.79
3773 3839 2.638154 CTATCGACGAGCCCGACC 59.362 66.667 3.01 0.00 38.97 4.79
3774 3840 2.903855 TATCGACGAGCCCGACCC 60.904 66.667 3.01 0.00 38.97 4.46
3782 3848 4.733725 AGCCCGACCCCCAGCTTA 62.734 66.667 0.00 0.00 29.27 3.09
3783 3849 3.489513 GCCCGACCCCCAGCTTAT 61.490 66.667 0.00 0.00 0.00 1.73
3784 3850 2.510906 CCCGACCCCCAGCTTATG 59.489 66.667 0.00 0.00 0.00 1.90
3785 3851 2.375345 CCCGACCCCCAGCTTATGT 61.375 63.158 0.00 0.00 0.00 2.29
3786 3852 1.052124 CCCGACCCCCAGCTTATGTA 61.052 60.000 0.00 0.00 0.00 2.29
3787 3853 0.834612 CCGACCCCCAGCTTATGTAA 59.165 55.000 0.00 0.00 0.00 2.41
3788 3854 1.474498 CCGACCCCCAGCTTATGTAAC 60.474 57.143 0.00 0.00 0.00 2.50
3789 3855 1.208535 CGACCCCCAGCTTATGTAACA 59.791 52.381 0.00 0.00 0.00 2.41
3790 3856 2.158813 CGACCCCCAGCTTATGTAACAT 60.159 50.000 0.00 0.00 0.00 2.71
3791 3857 3.070446 CGACCCCCAGCTTATGTAACATA 59.930 47.826 0.00 0.00 0.00 2.29
3792 3858 4.386711 GACCCCCAGCTTATGTAACATAC 58.613 47.826 0.00 0.00 0.00 2.39
3793 3859 3.137728 ACCCCCAGCTTATGTAACATACC 59.862 47.826 0.00 0.00 0.00 2.73
3794 3860 3.497942 CCCCCAGCTTATGTAACATACCC 60.498 52.174 0.00 0.00 0.00 3.69
3795 3861 3.394606 CCCCAGCTTATGTAACATACCCT 59.605 47.826 0.00 0.00 0.00 4.34
3796 3862 4.389374 CCCAGCTTATGTAACATACCCTG 58.611 47.826 0.00 0.00 0.00 4.45
3797 3863 4.389374 CCAGCTTATGTAACATACCCTGG 58.611 47.826 0.75 0.75 0.00 4.45
3798 3864 4.389374 CAGCTTATGTAACATACCCTGGG 58.611 47.826 12.28 12.28 0.00 4.45
3799 3865 3.394606 AGCTTATGTAACATACCCTGGGG 59.605 47.826 18.88 7.87 42.03 4.96
3809 3875 2.126372 CCCTGGGGGTCTGGGTTA 59.874 66.667 4.27 0.00 46.21 2.85
3810 3876 2.306384 CCCTGGGGGTCTGGGTTAC 61.306 68.421 4.27 0.00 46.21 2.50
3811 3877 1.540367 CCTGGGGGTCTGGGTTACA 60.540 63.158 0.00 0.00 0.00 2.41
3812 3878 0.919289 CCTGGGGGTCTGGGTTACAT 60.919 60.000 0.00 0.00 0.00 2.29
3813 3879 1.626913 CCTGGGGGTCTGGGTTACATA 60.627 57.143 0.00 0.00 0.00 2.29
3814 3880 2.418669 CTGGGGGTCTGGGTTACATAT 58.581 52.381 0.00 0.00 0.00 1.78
3815 3881 2.783510 CTGGGGGTCTGGGTTACATATT 59.216 50.000 0.00 0.00 0.00 1.28
3816 3882 2.512056 TGGGGGTCTGGGTTACATATTG 59.488 50.000 0.00 0.00 0.00 1.90
3817 3883 2.512476 GGGGGTCTGGGTTACATATTGT 59.488 50.000 0.00 0.00 0.00 2.71
3818 3884 3.717913 GGGGGTCTGGGTTACATATTGTA 59.282 47.826 0.00 0.00 0.00 2.41
3819 3885 4.202430 GGGGGTCTGGGTTACATATTGTAG 60.202 50.000 0.00 0.00 33.92 2.74
3820 3886 4.411212 GGGGTCTGGGTTACATATTGTAGT 59.589 45.833 0.00 0.00 33.92 2.73
3821 3887 5.454329 GGGGTCTGGGTTACATATTGTAGTC 60.454 48.000 0.00 0.00 33.92 2.59
3822 3888 5.287226 GGTCTGGGTTACATATTGTAGTCG 58.713 45.833 0.00 0.00 33.92 4.18
3823 3889 5.287226 GTCTGGGTTACATATTGTAGTCGG 58.713 45.833 0.00 0.00 33.92 4.79
3824 3890 4.056050 CTGGGTTACATATTGTAGTCGGC 58.944 47.826 0.00 0.00 33.92 5.54
3825 3891 3.707611 TGGGTTACATATTGTAGTCGGCT 59.292 43.478 0.00 0.00 33.92 5.52
3826 3892 4.894705 TGGGTTACATATTGTAGTCGGCTA 59.105 41.667 0.00 0.00 33.92 3.93
3827 3893 5.221303 TGGGTTACATATTGTAGTCGGCTAC 60.221 44.000 20.25 20.25 45.85 3.58
3834 3900 3.546407 GTAGTCGGCTACATCGGTG 57.454 57.895 21.98 0.00 45.18 4.94
3835 3901 1.019673 GTAGTCGGCTACATCGGTGA 58.980 55.000 21.98 0.00 45.18 4.02
3836 3902 1.002684 GTAGTCGGCTACATCGGTGAG 60.003 57.143 21.98 0.00 45.18 3.51
3837 3903 0.680280 AGTCGGCTACATCGGTGAGT 60.680 55.000 0.65 0.00 0.00 3.41
3838 3904 0.248539 GTCGGCTACATCGGTGAGTC 60.249 60.000 0.65 0.00 0.00 3.36
3839 3905 1.065928 CGGCTACATCGGTGAGTCC 59.934 63.158 0.65 0.00 0.00 3.85
3840 3906 1.384989 CGGCTACATCGGTGAGTCCT 61.385 60.000 0.65 0.00 0.00 3.85
3841 3907 0.824759 GGCTACATCGGTGAGTCCTT 59.175 55.000 0.65 0.00 0.00 3.36
3842 3908 1.202428 GGCTACATCGGTGAGTCCTTC 60.202 57.143 0.65 0.00 0.00 3.46
3843 3909 1.476891 GCTACATCGGTGAGTCCTTCA 59.523 52.381 0.65 0.00 0.00 3.02
3849 3915 4.580835 GTGAGTCCTTCACGGCTC 57.419 61.111 0.00 0.00 46.13 4.70
3850 3916 1.968310 GTGAGTCCTTCACGGCTCT 59.032 57.895 0.00 0.00 46.13 4.09
3851 3917 0.389166 GTGAGTCCTTCACGGCTCTG 60.389 60.000 0.00 0.00 46.13 3.35
3852 3918 0.539669 TGAGTCCTTCACGGCTCTGA 60.540 55.000 0.00 0.00 37.06 3.27
3853 3919 0.820871 GAGTCCTTCACGGCTCTGAT 59.179 55.000 0.00 0.00 34.83 2.90
3854 3920 2.025155 GAGTCCTTCACGGCTCTGATA 58.975 52.381 0.00 0.00 34.83 2.15
3855 3921 2.625790 GAGTCCTTCACGGCTCTGATAT 59.374 50.000 0.00 0.00 34.83 1.63
3856 3922 2.625790 AGTCCTTCACGGCTCTGATATC 59.374 50.000 0.00 0.00 0.00 1.63
3857 3923 2.625790 GTCCTTCACGGCTCTGATATCT 59.374 50.000 3.98 0.00 0.00 1.98
3858 3924 3.068873 GTCCTTCACGGCTCTGATATCTT 59.931 47.826 3.98 0.00 0.00 2.40
3859 3925 3.706594 TCCTTCACGGCTCTGATATCTTT 59.293 43.478 3.98 0.00 0.00 2.52
3860 3926 3.806521 CCTTCACGGCTCTGATATCTTTG 59.193 47.826 3.98 0.00 0.00 2.77
3861 3927 3.459232 TCACGGCTCTGATATCTTTGG 57.541 47.619 3.98 0.00 0.00 3.28
3862 3928 2.766263 TCACGGCTCTGATATCTTTGGT 59.234 45.455 3.98 0.00 0.00 3.67
3863 3929 3.197766 TCACGGCTCTGATATCTTTGGTT 59.802 43.478 3.98 0.00 0.00 3.67
3864 3930 3.557595 CACGGCTCTGATATCTTTGGTTC 59.442 47.826 3.98 0.00 0.00 3.62
3865 3931 2.797156 CGGCTCTGATATCTTTGGTTCG 59.203 50.000 3.98 0.00 0.00 3.95
3866 3932 3.738281 CGGCTCTGATATCTTTGGTTCGT 60.738 47.826 3.98 0.00 0.00 3.85
3867 3933 4.499188 CGGCTCTGATATCTTTGGTTCGTA 60.499 45.833 3.98 0.00 0.00 3.43
3868 3934 4.745620 GGCTCTGATATCTTTGGTTCGTAC 59.254 45.833 3.98 0.00 0.00 3.67
3869 3935 5.348986 GCTCTGATATCTTTGGTTCGTACA 58.651 41.667 3.98 0.00 0.00 2.90
3870 3936 5.986135 GCTCTGATATCTTTGGTTCGTACAT 59.014 40.000 3.98 0.00 0.00 2.29
3871 3937 7.145985 GCTCTGATATCTTTGGTTCGTACATA 58.854 38.462 3.98 0.00 0.00 2.29
3872 3938 7.652105 GCTCTGATATCTTTGGTTCGTACATAA 59.348 37.037 3.98 0.00 0.00 1.90
3873 3939 9.186323 CTCTGATATCTTTGGTTCGTACATAAG 57.814 37.037 3.98 0.00 0.00 1.73
3874 3940 8.692710 TCTGATATCTTTGGTTCGTACATAAGT 58.307 33.333 3.98 0.00 0.00 2.24
3875 3941 8.867112 TGATATCTTTGGTTCGTACATAAGTC 57.133 34.615 3.98 0.00 0.00 3.01
3876 3942 8.692710 TGATATCTTTGGTTCGTACATAAGTCT 58.307 33.333 3.98 0.00 0.00 3.24
3877 3943 9.530633 GATATCTTTGGTTCGTACATAAGTCTT 57.469 33.333 0.00 0.00 0.00 3.01
3878 3944 7.829378 ATCTTTGGTTCGTACATAAGTCTTC 57.171 36.000 0.00 0.00 0.00 2.87
3879 3945 6.161381 TCTTTGGTTCGTACATAAGTCTTCC 58.839 40.000 0.00 0.00 0.00 3.46
3880 3946 5.733620 TTGGTTCGTACATAAGTCTTCCT 57.266 39.130 0.00 0.00 0.00 3.36
3881 3947 5.068234 TGGTTCGTACATAAGTCTTCCTG 57.932 43.478 0.00 0.00 0.00 3.86
3882 3948 4.768448 TGGTTCGTACATAAGTCTTCCTGA 59.232 41.667 0.00 0.00 0.00 3.86
3883 3949 5.105877 TGGTTCGTACATAAGTCTTCCTGAG 60.106 44.000 0.00 0.00 0.00 3.35
3884 3950 5.105837 GGTTCGTACATAAGTCTTCCTGAGT 60.106 44.000 0.00 0.00 0.00 3.41
3885 3951 5.814764 TCGTACATAAGTCTTCCTGAGTC 57.185 43.478 0.00 0.00 0.00 3.36
3886 3952 5.498393 TCGTACATAAGTCTTCCTGAGTCT 58.502 41.667 0.00 0.00 0.00 3.24
3887 3953 5.944599 TCGTACATAAGTCTTCCTGAGTCTT 59.055 40.000 0.00 0.00 37.48 3.01
3888 3954 6.093771 TCGTACATAAGTCTTCCTGAGTCTTC 59.906 42.308 0.00 0.00 35.72 2.87
3889 3955 5.317733 ACATAAGTCTTCCTGAGTCTTCG 57.682 43.478 0.00 0.00 35.72 3.79
3890 3956 4.767928 ACATAAGTCTTCCTGAGTCTTCGT 59.232 41.667 0.00 0.00 35.72 3.85
3891 3957 5.944599 ACATAAGTCTTCCTGAGTCTTCGTA 59.055 40.000 0.00 0.00 35.72 3.43
3892 3958 4.769859 AAGTCTTCCTGAGTCTTCGTAC 57.230 45.455 0.00 0.00 29.39 3.67
3893 3959 3.752665 AGTCTTCCTGAGTCTTCGTACA 58.247 45.455 0.00 0.00 0.00 2.90
3894 3960 4.142790 AGTCTTCCTGAGTCTTCGTACAA 58.857 43.478 0.00 0.00 0.00 2.41
3895 3961 4.023021 AGTCTTCCTGAGTCTTCGTACAAC 60.023 45.833 0.00 0.00 0.00 3.32
3896 3962 2.983402 TCCTGAGTCTTCGTACAACG 57.017 50.000 0.00 0.00 44.19 4.10
3897 3963 1.068748 TCCTGAGTCTTCGTACAACGC 60.069 52.381 0.00 0.00 42.21 4.84
3898 3964 0.975544 CTGAGTCTTCGTACAACGCG 59.024 55.000 3.53 3.53 42.21 6.01
3899 3965 0.308684 TGAGTCTTCGTACAACGCGT 59.691 50.000 5.58 5.58 42.21 6.01
3900 3966 0.973423 GAGTCTTCGTACAACGCGTC 59.027 55.000 14.44 0.00 42.21 5.19
3901 3967 0.308684 AGTCTTCGTACAACGCGTCA 59.691 50.000 14.44 0.00 42.21 4.35
3902 3968 1.068748 AGTCTTCGTACAACGCGTCAT 60.069 47.619 14.44 6.29 42.21 3.06
3903 3969 1.057285 GTCTTCGTACAACGCGTCATG 59.943 52.381 14.44 11.42 42.21 3.07
3904 3970 0.365523 CTTCGTACAACGCGTCATGG 59.634 55.000 14.44 5.33 42.21 3.66
3905 3971 1.009903 TTCGTACAACGCGTCATGGG 61.010 55.000 14.44 2.30 42.21 4.00
3906 3972 2.782615 GTACAACGCGTCATGGGC 59.217 61.111 14.44 1.56 0.00 5.36
3907 3973 2.435234 TACAACGCGTCATGGGCC 60.435 61.111 14.44 0.00 0.00 5.80
3910 3976 4.071875 AACGCGTCATGGGCCGTA 62.072 61.111 14.44 0.00 0.00 4.02
3911 3977 4.807039 ACGCGTCATGGGCCGTAC 62.807 66.667 5.58 0.00 0.00 3.67
3912 3978 4.805231 CGCGTCATGGGCCGTACA 62.805 66.667 0.00 0.00 0.00 2.90
3913 3979 2.435234 GCGTCATGGGCCGTACAA 60.435 61.111 0.00 0.00 0.00 2.41
3914 3980 1.817941 GCGTCATGGGCCGTACAAT 60.818 57.895 0.00 0.00 0.00 2.71
3915 3981 2.013807 CGTCATGGGCCGTACAATG 58.986 57.895 0.00 0.00 0.00 2.82
3916 3982 0.742990 CGTCATGGGCCGTACAATGT 60.743 55.000 0.00 0.00 0.00 2.71
3917 3983 0.732571 GTCATGGGCCGTACAATGTG 59.267 55.000 0.00 0.00 0.00 3.21
3918 3984 0.393673 TCATGGGCCGTACAATGTGG 60.394 55.000 0.00 0.00 0.00 4.17
3922 3988 2.360600 GCCGTACAATGTGGCCCA 60.361 61.111 0.00 0.00 43.06 5.36
3923 3989 2.406616 GCCGTACAATGTGGCCCAG 61.407 63.158 0.00 0.00 43.06 4.45
3924 3990 1.748879 CCGTACAATGTGGCCCAGG 60.749 63.158 0.00 0.00 0.00 4.45
3925 3991 1.298340 CGTACAATGTGGCCCAGGA 59.702 57.895 0.00 0.00 0.00 3.86
3926 3992 0.107214 CGTACAATGTGGCCCAGGAT 60.107 55.000 0.00 0.00 0.00 3.24
3927 3993 1.392589 GTACAATGTGGCCCAGGATG 58.607 55.000 0.00 1.96 0.00 3.51
3928 3994 1.064758 GTACAATGTGGCCCAGGATGA 60.065 52.381 0.00 0.00 39.69 2.92
3929 3995 0.409092 ACAATGTGGCCCAGGATGAA 59.591 50.000 0.00 0.00 39.69 2.57
3930 3996 1.203162 ACAATGTGGCCCAGGATGAAA 60.203 47.619 0.00 0.00 39.69 2.69
3931 3997 1.205417 CAATGTGGCCCAGGATGAAAC 59.795 52.381 0.00 0.00 39.69 2.78
3932 3998 0.324645 ATGTGGCCCAGGATGAAACC 60.325 55.000 0.00 0.00 39.69 3.27
3933 3999 2.046285 GTGGCCCAGGATGAAACCG 61.046 63.158 0.00 0.00 39.69 4.44
3934 4000 2.355115 GGCCCAGGATGAAACCGT 59.645 61.111 0.00 0.00 39.69 4.83
3935 4001 1.749258 GGCCCAGGATGAAACCGTC 60.749 63.158 0.00 0.00 39.69 4.79
3936 4002 1.749258 GCCCAGGATGAAACCGTCC 60.749 63.158 0.00 0.00 39.69 4.79
3938 4004 1.200519 CCCAGGATGAAACCGTCCTA 58.799 55.000 5.93 0.00 45.80 2.94
3939 4005 1.768870 CCCAGGATGAAACCGTCCTAT 59.231 52.381 5.93 0.00 45.80 2.57
3940 4006 2.485479 CCCAGGATGAAACCGTCCTATG 60.485 54.545 5.93 1.83 45.80 2.23
3941 4007 2.170607 CCAGGATGAAACCGTCCTATGT 59.829 50.000 5.93 0.00 45.80 2.29
3942 4008 3.198068 CAGGATGAAACCGTCCTATGTG 58.802 50.000 5.93 0.00 45.80 3.21
3943 4009 2.838202 AGGATGAAACCGTCCTATGTGT 59.162 45.455 4.49 0.00 45.73 3.72
3944 4010 3.118738 AGGATGAAACCGTCCTATGTGTC 60.119 47.826 4.49 0.00 45.73 3.67
3945 4011 2.754946 TGAAACCGTCCTATGTGTCC 57.245 50.000 0.00 0.00 0.00 4.02
3946 4012 2.253610 TGAAACCGTCCTATGTGTCCT 58.746 47.619 0.00 0.00 0.00 3.85
3947 4013 2.232941 TGAAACCGTCCTATGTGTCCTC 59.767 50.000 0.00 0.00 0.00 3.71
3948 4014 1.933021 AACCGTCCTATGTGTCCTCA 58.067 50.000 0.00 0.00 0.00 3.86
3949 4015 1.475403 ACCGTCCTATGTGTCCTCAG 58.525 55.000 0.00 0.00 0.00 3.35
3950 4016 0.103208 CCGTCCTATGTGTCCTCAGC 59.897 60.000 0.00 0.00 0.00 4.26
3951 4017 0.103208 CGTCCTATGTGTCCTCAGCC 59.897 60.000 0.00 0.00 0.00 4.85
3952 4018 0.466124 GTCCTATGTGTCCTCAGCCC 59.534 60.000 0.00 0.00 0.00 5.19
3953 4019 0.042581 TCCTATGTGTCCTCAGCCCA 59.957 55.000 0.00 0.00 0.00 5.36
3954 4020 0.467384 CCTATGTGTCCTCAGCCCAG 59.533 60.000 0.00 0.00 0.00 4.45
3955 4021 0.179062 CTATGTGTCCTCAGCCCAGC 60.179 60.000 0.00 0.00 0.00 4.85
3956 4022 1.626356 TATGTGTCCTCAGCCCAGCC 61.626 60.000 0.00 0.00 0.00 4.85
3957 4023 4.416738 GTGTCCTCAGCCCAGCCC 62.417 72.222 0.00 0.00 0.00 5.19
3958 4024 4.980592 TGTCCTCAGCCCAGCCCA 62.981 66.667 0.00 0.00 0.00 5.36
3959 4025 4.416738 GTCCTCAGCCCAGCCCAC 62.417 72.222 0.00 0.00 0.00 4.61
3962 4028 4.421515 CTCAGCCCAGCCCACCAG 62.422 72.222 0.00 0.00 0.00 4.00
3972 4038 3.777556 CCCACCAGGCCAGAAAAC 58.222 61.111 5.01 0.00 0.00 2.43
3973 4039 1.152567 CCCACCAGGCCAGAAAACA 60.153 57.895 5.01 0.00 0.00 2.83
3974 4040 0.758685 CCCACCAGGCCAGAAAACAA 60.759 55.000 5.01 0.00 0.00 2.83
3975 4041 1.341080 CCACCAGGCCAGAAAACAAT 58.659 50.000 5.01 0.00 0.00 2.71
3976 4042 1.001181 CCACCAGGCCAGAAAACAATG 59.999 52.381 5.01 0.00 0.00 2.82
3977 4043 1.688197 CACCAGGCCAGAAAACAATGT 59.312 47.619 5.01 0.00 0.00 2.71
3978 4044 1.688197 ACCAGGCCAGAAAACAATGTG 59.312 47.619 5.01 0.00 0.00 3.21
3979 4045 1.001181 CCAGGCCAGAAAACAATGTGG 59.999 52.381 5.01 0.00 0.00 4.17
3980 4046 1.688197 CAGGCCAGAAAACAATGTGGT 59.312 47.619 5.01 0.00 32.20 4.16
3981 4047 2.102925 CAGGCCAGAAAACAATGTGGTT 59.897 45.455 5.01 0.00 32.20 3.67
3982 4048 3.320541 CAGGCCAGAAAACAATGTGGTTA 59.679 43.478 5.01 0.00 32.20 2.85
3983 4049 3.573967 AGGCCAGAAAACAATGTGGTTAG 59.426 43.478 5.01 0.00 32.20 2.34
3984 4050 3.572255 GGCCAGAAAACAATGTGGTTAGA 59.428 43.478 0.00 0.00 32.20 2.10
3985 4051 4.321230 GGCCAGAAAACAATGTGGTTAGAG 60.321 45.833 0.00 0.00 32.20 2.43
3986 4052 4.518970 GCCAGAAAACAATGTGGTTAGAGA 59.481 41.667 0.00 0.00 32.20 3.10
3987 4053 5.183904 GCCAGAAAACAATGTGGTTAGAGAT 59.816 40.000 0.00 0.00 32.20 2.75
3988 4054 6.374333 GCCAGAAAACAATGTGGTTAGAGATA 59.626 38.462 0.00 0.00 32.20 1.98
3989 4055 7.626452 GCCAGAAAACAATGTGGTTAGAGATAC 60.626 40.741 0.00 0.00 32.20 2.24
3990 4056 7.607991 CCAGAAAACAATGTGGTTAGAGATACT 59.392 37.037 0.00 0.00 0.00 2.12
3991 4057 9.003658 CAGAAAACAATGTGGTTAGAGATACTT 57.996 33.333 0.00 0.00 0.00 2.24
3992 4058 9.003658 AGAAAACAATGTGGTTAGAGATACTTG 57.996 33.333 0.00 0.00 0.00 3.16
3993 4059 7.687941 AAACAATGTGGTTAGAGATACTTGG 57.312 36.000 0.00 0.00 0.00 3.61
3994 4060 5.745227 ACAATGTGGTTAGAGATACTTGGG 58.255 41.667 0.00 0.00 0.00 4.12
3995 4061 5.250774 ACAATGTGGTTAGAGATACTTGGGT 59.749 40.000 0.00 0.00 0.00 4.51
3996 4062 5.615925 ATGTGGTTAGAGATACTTGGGTC 57.384 43.478 0.00 0.00 0.00 4.46
3997 4063 3.446161 TGTGGTTAGAGATACTTGGGTCG 59.554 47.826 0.00 0.00 0.00 4.79
3998 4064 3.028850 TGGTTAGAGATACTTGGGTCGG 58.971 50.000 0.00 0.00 0.00 4.79
3999 4065 2.364647 GGTTAGAGATACTTGGGTCGGG 59.635 54.545 0.00 0.00 0.00 5.14
4000 4066 3.294214 GTTAGAGATACTTGGGTCGGGA 58.706 50.000 0.00 0.00 0.00 5.14
4001 4067 1.777941 AGAGATACTTGGGTCGGGAC 58.222 55.000 0.00 0.00 0.00 4.46
4002 4068 1.006758 AGAGATACTTGGGTCGGGACA 59.993 52.381 0.75 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.104855 TCTGATATGAGTGCACCGCC 59.895 55.000 14.63 3.75 0.00 6.13
6 7 4.118410 CAGGTTGTCTCTGATATGAGTGC 58.882 47.826 0.00 0.00 35.68 4.40
7 8 4.118410 GCAGGTTGTCTCTGATATGAGTG 58.882 47.826 0.00 0.00 35.68 3.51
8 9 3.181482 CGCAGGTTGTCTCTGATATGAGT 60.181 47.826 0.00 0.00 35.68 3.41
9 10 3.067320 TCGCAGGTTGTCTCTGATATGAG 59.933 47.826 0.00 0.00 34.36 2.90
11 12 3.443099 TCGCAGGTTGTCTCTGATATG 57.557 47.619 0.00 0.00 34.36 1.78
12 13 3.386078 ACATCGCAGGTTGTCTCTGATAT 59.614 43.478 0.00 0.00 34.36 1.63
13 14 2.760650 ACATCGCAGGTTGTCTCTGATA 59.239 45.455 0.00 0.00 34.36 2.15
14 15 1.552337 ACATCGCAGGTTGTCTCTGAT 59.448 47.619 0.00 0.00 34.36 2.90
17 18 0.109086 CGACATCGCAGGTTGTCTCT 60.109 55.000 0.00 0.00 38.35 3.10
18 19 0.109272 TCGACATCGCAGGTTGTCTC 60.109 55.000 0.00 0.00 38.35 3.36
19 20 0.388649 GTCGACATCGCAGGTTGTCT 60.389 55.000 11.55 0.00 38.35 3.41
20 21 1.674611 CGTCGACATCGCAGGTTGTC 61.675 60.000 17.16 0.00 39.60 3.18
21 22 1.733041 CGTCGACATCGCAGGTTGT 60.733 57.895 17.16 0.00 39.60 3.32
22 23 3.072598 CGTCGACATCGCAGGTTG 58.927 61.111 17.16 0.00 39.60 3.77
37 38 4.096003 CCATCTTGGACGGGGCGT 62.096 66.667 0.00 0.00 40.96 5.68
39 40 4.115199 AGCCATCTTGGACGGGGC 62.115 66.667 0.00 0.00 40.96 5.80
40 41 2.124570 CAGCCATCTTGGACGGGG 60.125 66.667 0.00 0.00 40.96 5.73
41 42 2.124570 CCAGCCATCTTGGACGGG 60.125 66.667 0.00 0.00 40.96 5.28
42 43 1.002134 AACCAGCCATCTTGGACGG 60.002 57.895 0.00 0.00 40.96 4.79
43 44 0.321564 TGAACCAGCCATCTTGGACG 60.322 55.000 0.00 0.00 40.96 4.79
44 45 1.815003 CTTGAACCAGCCATCTTGGAC 59.185 52.381 0.00 0.00 40.96 4.02
45 46 1.272092 CCTTGAACCAGCCATCTTGGA 60.272 52.381 0.00 0.00 40.96 3.53
46 47 1.180029 CCTTGAACCAGCCATCTTGG 58.820 55.000 0.00 0.00 41.55 3.61
47 48 1.815003 GACCTTGAACCAGCCATCTTG 59.185 52.381 0.00 0.00 0.00 3.02
97 100 0.252467 CTCCACCTCCTCCCTTGTCT 60.252 60.000 0.00 0.00 0.00 3.41
168 179 1.202268 CGTATCTTCCGGGTCTGTGAC 60.202 57.143 0.00 0.00 0.00 3.67
184 195 5.477510 TCTTGCATGCCAAAATTTTCGTAT 58.522 33.333 16.68 0.00 31.94 3.06
212 223 1.593296 CCTCTTTTGCCAGCTCCAGC 61.593 60.000 0.00 0.00 42.49 4.85
355 367 7.093992 CCAAGACACCTTAAAACACTCAAAAA 58.906 34.615 0.00 0.00 0.00 1.94
363 375 6.003859 TCTAACCCAAGACACCTTAAAACA 57.996 37.500 0.00 0.00 0.00 2.83
417 429 8.630037 CAGTTTTTCTCCAACACCTACTTTAAT 58.370 33.333 0.00 0.00 0.00 1.40
437 450 4.081365 CCCAACCAAACCTTACACAGTTTT 60.081 41.667 0.00 0.00 34.02 2.43
438 451 3.449377 CCCAACCAAACCTTACACAGTTT 59.551 43.478 0.00 0.00 36.65 2.66
551 567 2.109181 GTCATAGTGGAGCCGGCC 59.891 66.667 26.15 15.07 0.00 6.13
552 568 1.227380 CTGTCATAGTGGAGCCGGC 60.227 63.158 21.89 21.89 0.00 6.13
553 569 1.227380 GCTGTCATAGTGGAGCCGG 60.227 63.158 0.00 0.00 0.00 6.13
554 570 1.589993 CGCTGTCATAGTGGAGCCG 60.590 63.158 0.00 0.00 33.19 5.52
555 571 4.427394 CGCTGTCATAGTGGAGCC 57.573 61.111 0.00 0.00 33.19 4.70
560 576 2.224217 CGTCGCCGCTGTCATAGTG 61.224 63.158 0.00 0.00 36.65 2.74
561 577 2.102357 CGTCGCCGCTGTCATAGT 59.898 61.111 0.00 0.00 0.00 2.12
562 578 2.655364 CCGTCGCCGCTGTCATAG 60.655 66.667 0.00 0.00 0.00 2.23
563 579 4.865761 GCCGTCGCCGCTGTCATA 62.866 66.667 0.00 0.00 0.00 2.15
581 597 1.870055 TACCACCAGAACGAGCCGTC 61.870 60.000 0.69 0.00 39.99 4.79
582 598 1.874345 CTACCACCAGAACGAGCCGT 61.874 60.000 0.00 0.00 43.97 5.68
583 599 1.153823 CTACCACCAGAACGAGCCG 60.154 63.158 0.00 0.00 0.00 5.52
584 600 1.448013 GCTACCACCAGAACGAGCC 60.448 63.158 0.00 0.00 0.00 4.70
585 601 0.320421 TTGCTACCACCAGAACGAGC 60.320 55.000 0.00 0.00 0.00 5.03
586 602 2.002586 CATTGCTACCACCAGAACGAG 58.997 52.381 0.00 0.00 0.00 4.18
587 603 1.338674 CCATTGCTACCACCAGAACGA 60.339 52.381 0.00 0.00 0.00 3.85
588 604 1.086696 CCATTGCTACCACCAGAACG 58.913 55.000 0.00 0.00 0.00 3.95
589 605 2.084546 GACCATTGCTACCACCAGAAC 58.915 52.381 0.00 0.00 0.00 3.01
590 606 1.338674 CGACCATTGCTACCACCAGAA 60.339 52.381 0.00 0.00 0.00 3.02
591 607 0.249120 CGACCATTGCTACCACCAGA 59.751 55.000 0.00 0.00 0.00 3.86
592 608 1.369091 GCGACCATTGCTACCACCAG 61.369 60.000 0.00 0.00 0.00 4.00
593 609 1.376683 GCGACCATTGCTACCACCA 60.377 57.895 0.00 0.00 0.00 4.17
594 610 1.078426 AGCGACCATTGCTACCACC 60.078 57.895 0.00 0.00 41.87 4.61
595 611 1.421410 CGAGCGACCATTGCTACCAC 61.421 60.000 0.00 0.00 44.18 4.16
596 612 1.153647 CGAGCGACCATTGCTACCA 60.154 57.895 0.00 0.00 44.18 3.25
597 613 0.249489 ATCGAGCGACCATTGCTACC 60.249 55.000 0.00 0.00 44.18 3.18
598 614 0.855349 CATCGAGCGACCATTGCTAC 59.145 55.000 0.00 0.00 44.18 3.58
599 615 0.249447 CCATCGAGCGACCATTGCTA 60.249 55.000 0.00 0.00 44.18 3.49
601 617 1.766143 GACCATCGAGCGACCATTGC 61.766 60.000 0.00 0.00 0.00 3.56
602 618 1.154205 GGACCATCGAGCGACCATTG 61.154 60.000 0.00 0.00 0.00 2.82
603 619 1.144057 GGACCATCGAGCGACCATT 59.856 57.895 0.00 0.00 0.00 3.16
604 620 1.402896 ATGGACCATCGAGCGACCAT 61.403 55.000 0.00 11.12 33.98 3.55
605 621 0.753848 TATGGACCATCGAGCGACCA 60.754 55.000 11.17 7.88 0.00 4.02
606 622 0.039074 CTATGGACCATCGAGCGACC 60.039 60.000 11.17 0.00 0.00 4.79
607 623 0.952280 TCTATGGACCATCGAGCGAC 59.048 55.000 11.17 0.00 0.00 5.19
608 624 0.952280 GTCTATGGACCATCGAGCGA 59.048 55.000 11.17 0.00 36.53 4.93
609 625 3.481009 GTCTATGGACCATCGAGCG 57.519 57.895 11.17 0.00 36.53 5.03
618 634 7.923414 AAAAACTACATTGAGGTCTATGGAC 57.077 36.000 0.00 0.00 41.43 4.02
624 640 9.686683 AGCATAATAAAAACTACATTGAGGTCT 57.313 29.630 0.00 0.00 0.00 3.85
643 659 9.793252 GAAAGTACAAATCACATCAAGCATAAT 57.207 29.630 0.00 0.00 0.00 1.28
644 660 7.962373 CGAAAGTACAAATCACATCAAGCATAA 59.038 33.333 0.00 0.00 0.00 1.90
645 661 7.333174 TCGAAAGTACAAATCACATCAAGCATA 59.667 33.333 0.00 0.00 0.00 3.14
646 662 6.149308 TCGAAAGTACAAATCACATCAAGCAT 59.851 34.615 0.00 0.00 0.00 3.79
647 663 5.468409 TCGAAAGTACAAATCACATCAAGCA 59.532 36.000 0.00 0.00 0.00 3.91
648 664 5.927030 TCGAAAGTACAAATCACATCAAGC 58.073 37.500 0.00 0.00 0.00 4.01
649 665 7.742151 TCATCGAAAGTACAAATCACATCAAG 58.258 34.615 0.00 0.00 0.00 3.02
650 666 7.665561 TCATCGAAAGTACAAATCACATCAA 57.334 32.000 0.00 0.00 0.00 2.57
651 667 7.665561 TTCATCGAAAGTACAAATCACATCA 57.334 32.000 0.00 0.00 0.00 3.07
652 668 8.607459 AGATTCATCGAAAGTACAAATCACATC 58.393 33.333 0.00 0.00 0.00 3.06
653 669 8.498054 AGATTCATCGAAAGTACAAATCACAT 57.502 30.769 0.00 0.00 0.00 3.21
654 670 7.905604 AGATTCATCGAAAGTACAAATCACA 57.094 32.000 0.00 0.00 0.00 3.58
705 721 0.606604 TACCTCGCGCCTCTCTTTTT 59.393 50.000 0.00 0.00 0.00 1.94
706 722 0.824759 ATACCTCGCGCCTCTCTTTT 59.175 50.000 0.00 0.00 0.00 2.27
707 723 0.824759 AATACCTCGCGCCTCTCTTT 59.175 50.000 0.00 0.00 0.00 2.52
708 724 0.824759 AAATACCTCGCGCCTCTCTT 59.175 50.000 0.00 0.00 0.00 2.85
709 725 0.103208 CAAATACCTCGCGCCTCTCT 59.897 55.000 0.00 0.00 0.00 3.10
710 726 1.491505 GCAAATACCTCGCGCCTCTC 61.492 60.000 0.00 0.00 0.00 3.20
711 727 1.521681 GCAAATACCTCGCGCCTCT 60.522 57.895 0.00 0.00 0.00 3.69
712 728 2.534903 GGCAAATACCTCGCGCCTC 61.535 63.158 0.00 0.00 39.73 4.70
713 729 2.513897 GGCAAATACCTCGCGCCT 60.514 61.111 0.00 0.00 39.73 5.52
714 730 3.937062 CGGCAAATACCTCGCGCC 61.937 66.667 0.00 0.00 39.45 6.53
715 731 3.151673 GACGGCAAATACCTCGCGC 62.152 63.158 0.00 0.00 0.00 6.86
716 732 2.856346 CGACGGCAAATACCTCGCG 61.856 63.158 0.00 0.00 0.00 5.87
717 733 2.522638 CCGACGGCAAATACCTCGC 61.523 63.158 0.00 0.00 32.47 5.03
718 734 1.143969 GACCGACGGCAAATACCTCG 61.144 60.000 15.39 0.00 33.14 4.63
719 735 1.143969 CGACCGACGGCAAATACCTC 61.144 60.000 15.39 0.00 38.46 3.85
720 736 1.153706 CGACCGACGGCAAATACCT 60.154 57.895 15.39 0.00 38.46 3.08
721 737 1.153784 TCGACCGACGGCAAATACC 60.154 57.895 15.39 0.00 42.82 2.73
722 738 1.993706 GTCGACCGACGGCAAATAC 59.006 57.895 15.39 1.63 46.56 1.89
723 739 4.481870 GTCGACCGACGGCAAATA 57.518 55.556 15.39 0.00 46.56 1.40
775 791 1.222387 CCCCCGCCGACTATTTTCA 59.778 57.895 0.00 0.00 0.00 2.69
817 833 2.340078 GCTCTCTCCGTGTGTGCA 59.660 61.111 0.00 0.00 0.00 4.57
915 932 1.966451 GCTGGGTGACAACTTCCGG 60.966 63.158 0.00 0.00 0.00 5.14
1161 1207 2.260869 CCAAACACCTGGTCGGCAG 61.261 63.158 0.00 0.00 35.61 4.85
1216 1262 3.458163 CCTCAAGGCCGGCGTCTA 61.458 66.667 23.85 12.46 0.00 2.59
1378 1432 3.627123 TCCACACACACAGAATTCACAAG 59.373 43.478 8.44 0.00 0.00 3.16
1599 1654 3.009033 ACAGCAGCAGAAAATACTGGGTA 59.991 43.478 0.00 0.00 38.22 3.69
1720 1775 8.913487 TCTTATTCTGATACATCAACATGCAT 57.087 30.769 0.00 0.00 36.18 3.96
1757 1812 1.153549 GCCGGAGACCTAGCTGTTG 60.154 63.158 5.05 0.00 0.00 3.33
1897 1952 2.417379 GGAGAGAGCAGAATACACGCAA 60.417 50.000 0.00 0.00 0.00 4.85
1899 1954 1.407258 AGGAGAGAGCAGAATACACGC 59.593 52.381 0.00 0.00 0.00 5.34
1914 1969 3.262660 ACTCTGTTTGCATCATCAGGAGA 59.737 43.478 10.84 0.00 0.00 3.71
1976 2031 8.859090 TGTTACTTGATCATTTCAAAATCAGGT 58.141 29.630 0.00 5.26 43.64 4.00
2007 2062 3.088532 TCATTAACAATCAGCGGCCTTT 58.911 40.909 0.00 0.00 0.00 3.11
2141 2197 2.520500 TGCAGGCCCTCGCAAAAA 60.521 55.556 9.51 0.00 34.59 1.94
2142 2198 2.974692 TTCTGCAGGCCCTCGCAAAA 62.975 55.000 15.13 4.03 37.76 2.44
2143 2199 3.490031 TTCTGCAGGCCCTCGCAAA 62.490 57.895 15.13 7.82 37.76 3.68
2144 2200 3.907260 CTTCTGCAGGCCCTCGCAA 62.907 63.158 15.13 0.00 37.76 4.85
2145 2201 4.399395 CTTCTGCAGGCCCTCGCA 62.399 66.667 15.13 11.27 36.38 5.10
2154 2210 4.319177 AGTAAAGCAACTACCTTCTGCAG 58.681 43.478 7.63 7.63 38.58 4.41
2155 2211 4.351874 AGTAAAGCAACTACCTTCTGCA 57.648 40.909 0.00 0.00 38.58 4.41
2156 2212 7.490000 TCTATAGTAAAGCAACTACCTTCTGC 58.510 38.462 0.00 0.00 34.87 4.26
2157 2213 8.904834 TCTCTATAGTAAAGCAACTACCTTCTG 58.095 37.037 0.00 0.00 34.87 3.02
2158 2214 9.476928 TTCTCTATAGTAAAGCAACTACCTTCT 57.523 33.333 0.00 0.00 34.87 2.85
2159 2215 9.518906 GTTCTCTATAGTAAAGCAACTACCTTC 57.481 37.037 0.00 0.00 34.87 3.46
2160 2216 9.257428 AGTTCTCTATAGTAAAGCAACTACCTT 57.743 33.333 0.00 0.00 34.87 3.50
2161 2217 8.826293 AGTTCTCTATAGTAAAGCAACTACCT 57.174 34.615 0.00 0.00 34.87 3.08
2209 2265 5.103940 TGGGCCTTAAGCTAATTTCAGAGAT 60.104 40.000 4.53 0.00 43.05 2.75
2257 2313 9.144747 CTCGATTTGAAACTTTCTCATCTAAGA 57.855 33.333 3.22 0.00 0.00 2.10
2290 2346 2.170397 CAAGTTTGGGAAAGGTTGGCTT 59.830 45.455 0.00 0.00 0.00 4.35
2410 2473 6.127479 GGCAGGGTTATCTGTAGATGAGATAG 60.127 46.154 4.67 0.00 34.61 2.08
2419 2482 2.628178 TCATCGGCAGGGTTATCTGTAG 59.372 50.000 0.00 0.00 37.12 2.74
2494 2557 5.508567 TGCATCCAAGACCTTGATTATCAA 58.491 37.500 11.06 7.46 42.93 2.57
2721 2784 0.043940 ACCTGGAGGCTCCTCTCATT 59.956 55.000 32.28 9.61 42.38 2.57
2742 2805 2.553602 CTGTGTGGTTCTTGCTATGCAA 59.446 45.455 4.87 4.87 46.80 4.08
2936 2999 0.534877 GTGTCCATGCACTCACACCA 60.535 55.000 11.22 0.00 36.51 4.17
3272 3337 5.235616 TCTTGTGGACGATGTAAGTTTTGTC 59.764 40.000 0.00 0.00 0.00 3.18
3276 3341 6.092259 GCTAATCTTGTGGACGATGTAAGTTT 59.908 38.462 0.00 0.00 0.00 2.66
3295 3360 4.457257 CCCCTAGCTGCTTATTTGCTAATC 59.543 45.833 7.79 0.00 38.59 1.75
3328 3394 7.254455 CCTGATTTAGCTCCAACGTTATACTTG 60.254 40.741 0.00 0.00 0.00 3.16
3330 3396 6.281405 CCTGATTTAGCTCCAACGTTATACT 58.719 40.000 0.00 0.00 0.00 2.12
3337 3403 1.737838 TGCCTGATTTAGCTCCAACG 58.262 50.000 0.00 0.00 0.00 4.10
3340 3406 3.457380 AGAGATTGCCTGATTTAGCTCCA 59.543 43.478 0.00 0.00 0.00 3.86
3352 3418 0.032017 ACCCTACCGAGAGATTGCCT 60.032 55.000 0.00 0.00 0.00 4.75
3369 3435 0.977395 AATCGCCTAGCCAGGATACC 59.023 55.000 0.85 0.00 45.91 2.73
3376 3442 3.089874 AGCCCAATCGCCTAGCCA 61.090 61.111 0.00 0.00 0.00 4.75
3377 3443 2.592861 CAGCCCAATCGCCTAGCC 60.593 66.667 0.00 0.00 0.00 3.93
3378 3444 2.403132 ATCCAGCCCAATCGCCTAGC 62.403 60.000 0.00 0.00 0.00 3.42
3379 3445 0.604780 CATCCAGCCCAATCGCCTAG 60.605 60.000 0.00 0.00 0.00 3.02
3380 3446 1.451504 CATCCAGCCCAATCGCCTA 59.548 57.895 0.00 0.00 0.00 3.93
3381 3447 2.194056 CATCCAGCCCAATCGCCT 59.806 61.111 0.00 0.00 0.00 5.52
3382 3448 2.908940 CCATCCAGCCCAATCGCC 60.909 66.667 0.00 0.00 0.00 5.54
3383 3449 2.189499 GTCCATCCAGCCCAATCGC 61.189 63.158 0.00 0.00 0.00 4.58
3384 3450 1.889105 CGTCCATCCAGCCCAATCG 60.889 63.158 0.00 0.00 0.00 3.34
3385 3451 1.526917 CCGTCCATCCAGCCCAATC 60.527 63.158 0.00 0.00 0.00 2.67
3386 3452 0.986019 TACCGTCCATCCAGCCCAAT 60.986 55.000 0.00 0.00 0.00 3.16
3387 3453 1.202099 TTACCGTCCATCCAGCCCAA 61.202 55.000 0.00 0.00 0.00 4.12
3388 3454 1.613928 TTACCGTCCATCCAGCCCA 60.614 57.895 0.00 0.00 0.00 5.36
3389 3455 1.153229 GTTACCGTCCATCCAGCCC 60.153 63.158 0.00 0.00 0.00 5.19
3390 3456 0.743345 GTGTTACCGTCCATCCAGCC 60.743 60.000 0.00 0.00 0.00 4.85
3391 3457 0.249398 AGTGTTACCGTCCATCCAGC 59.751 55.000 0.00 0.00 0.00 4.85
3392 3458 2.100916 CCTAGTGTTACCGTCCATCCAG 59.899 54.545 0.00 0.00 0.00 3.86
3393 3459 2.104967 CCTAGTGTTACCGTCCATCCA 58.895 52.381 0.00 0.00 0.00 3.41
3394 3460 1.202498 GCCTAGTGTTACCGTCCATCC 60.202 57.143 0.00 0.00 0.00 3.51
3395 3461 1.479323 TGCCTAGTGTTACCGTCCATC 59.521 52.381 0.00 0.00 0.00 3.51
3396 3462 1.563924 TGCCTAGTGTTACCGTCCAT 58.436 50.000 0.00 0.00 0.00 3.41
3397 3463 1.274167 CTTGCCTAGTGTTACCGTCCA 59.726 52.381 0.00 0.00 0.00 4.02
3398 3464 1.547372 TCTTGCCTAGTGTTACCGTCC 59.453 52.381 0.00 0.00 0.00 4.79
3399 3465 2.230750 AGTCTTGCCTAGTGTTACCGTC 59.769 50.000 0.00 0.00 0.00 4.79
3400 3466 2.245582 AGTCTTGCCTAGTGTTACCGT 58.754 47.619 0.00 0.00 0.00 4.83
3401 3467 3.314541 AAGTCTTGCCTAGTGTTACCG 57.685 47.619 0.00 0.00 0.00 4.02
3402 3468 4.934001 GGTAAAGTCTTGCCTAGTGTTACC 59.066 45.833 0.00 0.00 34.62 2.85
3403 3469 4.934001 GGGTAAAGTCTTGCCTAGTGTTAC 59.066 45.833 6.45 0.00 37.46 2.50
3404 3470 4.594062 TGGGTAAAGTCTTGCCTAGTGTTA 59.406 41.667 6.45 0.00 37.46 2.41
3405 3471 3.393278 TGGGTAAAGTCTTGCCTAGTGTT 59.607 43.478 6.45 0.00 37.46 3.32
3406 3472 2.976882 TGGGTAAAGTCTTGCCTAGTGT 59.023 45.455 6.45 0.00 37.46 3.55
3407 3473 3.600388 CTGGGTAAAGTCTTGCCTAGTG 58.400 50.000 10.04 0.00 39.91 2.74
3408 3474 2.572104 CCTGGGTAAAGTCTTGCCTAGT 59.428 50.000 14.50 0.00 42.20 2.57
3409 3475 2.572104 ACCTGGGTAAAGTCTTGCCTAG 59.428 50.000 10.86 10.86 43.02 3.02
3410 3476 2.627933 ACCTGGGTAAAGTCTTGCCTA 58.372 47.619 0.00 0.91 37.46 3.93
3411 3477 1.446016 ACCTGGGTAAAGTCTTGCCT 58.554 50.000 0.00 0.00 37.46 4.75
3412 3478 2.160205 GAACCTGGGTAAAGTCTTGCC 58.840 52.381 0.00 0.00 36.62 4.52
3413 3479 1.804748 CGAACCTGGGTAAAGTCTTGC 59.195 52.381 0.00 0.00 0.00 4.01
3414 3480 2.423577 CCGAACCTGGGTAAAGTCTTG 58.576 52.381 0.00 0.00 0.00 3.02
3415 3481 1.350019 CCCGAACCTGGGTAAAGTCTT 59.650 52.381 0.00 0.00 44.76 3.01
3416 3482 0.981943 CCCGAACCTGGGTAAAGTCT 59.018 55.000 0.00 0.00 44.76 3.24
3417 3483 3.545724 CCCGAACCTGGGTAAAGTC 57.454 57.895 0.00 0.00 44.76 3.01
3425 3491 4.410400 GTGAGGGCCCGAACCTGG 62.410 72.222 18.44 0.00 38.79 4.45
3426 3492 4.760047 CGTGAGGGCCCGAACCTG 62.760 72.222 18.44 3.27 38.79 4.00
3436 3502 5.043370 AGAGTATTATCTCGACCGTGAGGG 61.043 50.000 0.00 0.00 46.65 4.30
3438 3504 5.927689 AGTAGAGTATTATCTCGACCGTGAG 59.072 44.000 0.00 0.00 39.63 3.51
3439 3505 5.851720 AGTAGAGTATTATCTCGACCGTGA 58.148 41.667 0.00 0.00 39.63 4.35
3440 3506 5.120519 GGAGTAGAGTATTATCTCGACCGTG 59.879 48.000 0.00 0.00 39.63 4.94
3441 3507 5.011943 AGGAGTAGAGTATTATCTCGACCGT 59.988 44.000 0.00 0.00 39.63 4.83
3442 3508 5.349270 CAGGAGTAGAGTATTATCTCGACCG 59.651 48.000 0.00 0.00 39.63 4.79
3443 3509 5.122711 GCAGGAGTAGAGTATTATCTCGACC 59.877 48.000 0.00 0.00 39.63 4.79
3444 3510 5.935789 AGCAGGAGTAGAGTATTATCTCGAC 59.064 44.000 0.00 0.00 39.28 4.20
3445 3511 6.116711 AGCAGGAGTAGAGTATTATCTCGA 57.883 41.667 0.00 0.00 39.21 4.04
3446 3512 6.205853 ACAAGCAGGAGTAGAGTATTATCTCG 59.794 42.308 0.00 0.00 39.21 4.04
3447 3513 7.013846 ACACAAGCAGGAGTAGAGTATTATCTC 59.986 40.741 0.00 0.00 34.96 2.75
3448 3514 6.836527 ACACAAGCAGGAGTAGAGTATTATCT 59.163 38.462 0.00 0.00 0.00 1.98
3449 3515 7.045126 ACACAAGCAGGAGTAGAGTATTATC 57.955 40.000 0.00 0.00 0.00 1.75
3450 3516 8.713708 ATACACAAGCAGGAGTAGAGTATTAT 57.286 34.615 0.00 0.00 0.00 1.28
3451 3517 9.809395 ATATACACAAGCAGGAGTAGAGTATTA 57.191 33.333 0.00 0.00 0.00 0.98
3452 3518 8.713708 ATATACACAAGCAGGAGTAGAGTATT 57.286 34.615 0.00 0.00 0.00 1.89
3453 3519 8.580720 CAATATACACAAGCAGGAGTAGAGTAT 58.419 37.037 0.00 0.00 0.00 2.12
3454 3520 7.470147 GCAATATACACAAGCAGGAGTAGAGTA 60.470 40.741 0.00 0.00 0.00 2.59
3455 3521 6.684111 GCAATATACACAAGCAGGAGTAGAGT 60.684 42.308 0.00 0.00 0.00 3.24
3456 3522 5.694006 GCAATATACACAAGCAGGAGTAGAG 59.306 44.000 0.00 0.00 0.00 2.43
3457 3523 5.601662 GCAATATACACAAGCAGGAGTAGA 58.398 41.667 0.00 0.00 0.00 2.59
3458 3524 4.445718 CGCAATATACACAAGCAGGAGTAG 59.554 45.833 0.00 0.00 0.00 2.57
3459 3525 4.098807 TCGCAATATACACAAGCAGGAGTA 59.901 41.667 0.00 0.00 0.00 2.59
3460 3526 3.118775 TCGCAATATACACAAGCAGGAGT 60.119 43.478 0.00 0.00 0.00 3.85
3461 3527 3.457234 TCGCAATATACACAAGCAGGAG 58.543 45.455 0.00 0.00 0.00 3.69
3462 3528 3.457234 CTCGCAATATACACAAGCAGGA 58.543 45.455 0.00 0.00 0.00 3.86
3463 3529 2.545526 CCTCGCAATATACACAAGCAGG 59.454 50.000 0.00 0.00 0.00 4.85
3464 3530 2.545526 CCCTCGCAATATACACAAGCAG 59.454 50.000 0.00 0.00 0.00 4.24
3465 3531 2.560504 CCCTCGCAATATACACAAGCA 58.439 47.619 0.00 0.00 0.00 3.91
3466 3532 1.873591 CCCCTCGCAATATACACAAGC 59.126 52.381 0.00 0.00 0.00 4.01
3735 3801 5.904984 AGCATACATACAATCCCTTGGTA 57.095 39.130 0.00 0.00 36.64 3.25
3736 3802 4.796110 AGCATACATACAATCCCTTGGT 57.204 40.909 0.00 0.00 36.64 3.67
3737 3803 5.582269 CGATAGCATACATACAATCCCTTGG 59.418 44.000 0.00 0.00 36.64 3.61
3738 3804 6.311445 GTCGATAGCATACATACAATCCCTTG 59.689 42.308 0.00 0.00 38.39 3.61
3739 3805 6.398918 GTCGATAGCATACATACAATCCCTT 58.601 40.000 0.00 0.00 0.00 3.95
3740 3806 5.393135 CGTCGATAGCATACATACAATCCCT 60.393 44.000 0.00 0.00 0.00 4.20
3741 3807 4.798907 CGTCGATAGCATACATACAATCCC 59.201 45.833 0.00 0.00 0.00 3.85
3742 3808 5.637809 TCGTCGATAGCATACATACAATCC 58.362 41.667 0.00 0.00 0.00 3.01
3743 3809 5.228220 GCTCGTCGATAGCATACATACAATC 59.772 44.000 15.54 0.00 39.83 2.67
3744 3810 5.096169 GCTCGTCGATAGCATACATACAAT 58.904 41.667 15.54 0.00 39.83 2.71
3745 3811 4.473199 GCTCGTCGATAGCATACATACAA 58.527 43.478 15.54 0.00 39.83 2.41
3746 3812 3.119955 GGCTCGTCGATAGCATACATACA 60.120 47.826 20.26 0.00 41.93 2.29
3747 3813 3.427243 GGCTCGTCGATAGCATACATAC 58.573 50.000 20.26 2.33 41.93 2.39
3748 3814 2.422479 GGGCTCGTCGATAGCATACATA 59.578 50.000 20.26 0.00 41.93 2.29
3749 3815 1.202582 GGGCTCGTCGATAGCATACAT 59.797 52.381 20.26 0.00 41.93 2.29
3750 3816 0.596577 GGGCTCGTCGATAGCATACA 59.403 55.000 20.26 0.00 41.93 2.29
3751 3817 0.454620 CGGGCTCGTCGATAGCATAC 60.455 60.000 20.26 11.17 41.93 2.39
3752 3818 0.604511 TCGGGCTCGTCGATAGCATA 60.605 55.000 20.26 6.10 41.93 3.14
3753 3819 1.897137 TCGGGCTCGTCGATAGCAT 60.897 57.895 20.26 0.00 41.93 3.79
3754 3820 2.515290 TCGGGCTCGTCGATAGCA 60.515 61.111 20.26 2.10 41.93 3.49
3755 3821 2.051166 GTCGGGCTCGTCGATAGC 60.051 66.667 5.57 12.86 38.93 2.97
3756 3822 2.638154 GGTCGGGCTCGTCGATAG 59.362 66.667 5.57 0.00 38.93 2.08
3757 3823 2.903855 GGGTCGGGCTCGTCGATA 60.904 66.667 5.57 0.00 38.93 2.92
3765 3831 4.733725 TAAGCTGGGGGTCGGGCT 62.734 66.667 0.00 0.00 36.53 5.19
3766 3832 3.489513 ATAAGCTGGGGGTCGGGC 61.490 66.667 0.00 0.00 0.00 6.13
3767 3833 1.052124 TACATAAGCTGGGGGTCGGG 61.052 60.000 0.00 0.00 0.00 5.14
3768 3834 0.834612 TTACATAAGCTGGGGGTCGG 59.165 55.000 0.00 0.00 0.00 4.79
3769 3835 1.208535 TGTTACATAAGCTGGGGGTCG 59.791 52.381 0.00 0.00 0.00 4.79
3770 3836 3.577805 ATGTTACATAAGCTGGGGGTC 57.422 47.619 0.00 0.00 0.00 4.46
3771 3837 3.137728 GGTATGTTACATAAGCTGGGGGT 59.862 47.826 6.64 0.00 0.00 4.95
3772 3838 3.497942 GGGTATGTTACATAAGCTGGGGG 60.498 52.174 6.64 0.00 0.00 5.40
3773 3839 3.394606 AGGGTATGTTACATAAGCTGGGG 59.605 47.826 6.64 0.00 0.00 4.96
3774 3840 4.389374 CAGGGTATGTTACATAAGCTGGG 58.611 47.826 6.64 0.00 0.00 4.45
3775 3841 4.389374 CCAGGGTATGTTACATAAGCTGG 58.611 47.826 6.64 0.00 0.00 4.85
3776 3842 4.389374 CCCAGGGTATGTTACATAAGCTG 58.611 47.826 6.64 0.00 0.00 4.24
3777 3843 3.394606 CCCCAGGGTATGTTACATAAGCT 59.605 47.826 6.64 0.00 0.00 3.74
3778 3844 3.497942 CCCCCAGGGTATGTTACATAAGC 60.498 52.174 6.64 1.78 38.25 3.09
3779 3845 4.367039 CCCCCAGGGTATGTTACATAAG 57.633 50.000 6.64 0.00 38.25 1.73
3793 3859 0.919289 ATGTAACCCAGACCCCCAGG 60.919 60.000 0.00 0.00 40.04 4.45
3794 3860 1.887797 TATGTAACCCAGACCCCCAG 58.112 55.000 0.00 0.00 0.00 4.45
3795 3861 2.512056 CAATATGTAACCCAGACCCCCA 59.488 50.000 0.00 0.00 0.00 4.96
3796 3862 2.512476 ACAATATGTAACCCAGACCCCC 59.488 50.000 0.00 0.00 0.00 5.40
3797 3863 3.945640 ACAATATGTAACCCAGACCCC 57.054 47.619 0.00 0.00 0.00 4.95
3798 3864 5.608449 GACTACAATATGTAACCCAGACCC 58.392 45.833 0.00 0.00 31.67 4.46
3799 3865 5.287226 CGACTACAATATGTAACCCAGACC 58.713 45.833 0.00 0.00 31.67 3.85
3800 3866 5.287226 CCGACTACAATATGTAACCCAGAC 58.713 45.833 0.00 0.00 31.67 3.51
3801 3867 4.202182 GCCGACTACAATATGTAACCCAGA 60.202 45.833 0.00 0.00 31.67 3.86
3802 3868 4.056050 GCCGACTACAATATGTAACCCAG 58.944 47.826 0.00 0.00 31.67 4.45
3803 3869 3.707611 AGCCGACTACAATATGTAACCCA 59.292 43.478 0.00 0.00 31.67 4.51
3804 3870 4.332428 AGCCGACTACAATATGTAACCC 57.668 45.455 0.00 0.00 31.67 4.11
3817 3883 1.306148 CTCACCGATGTAGCCGACTA 58.694 55.000 0.00 0.00 0.00 2.59
3818 3884 0.680280 ACTCACCGATGTAGCCGACT 60.680 55.000 0.00 0.00 0.00 4.18
3819 3885 0.248539 GACTCACCGATGTAGCCGAC 60.249 60.000 0.00 0.00 0.00 4.79
3820 3886 1.381928 GGACTCACCGATGTAGCCGA 61.382 60.000 0.00 0.00 0.00 5.54
3821 3887 1.065928 GGACTCACCGATGTAGCCG 59.934 63.158 0.00 0.00 0.00 5.52
3822 3888 0.824759 AAGGACTCACCGATGTAGCC 59.175 55.000 0.00 0.00 44.74 3.93
3823 3889 1.476891 TGAAGGACTCACCGATGTAGC 59.523 52.381 0.00 0.00 44.74 3.58
3833 3899 0.539669 TCAGAGCCGTGAAGGACTCA 60.540 55.000 10.23 0.00 45.00 3.41
3834 3900 0.820871 ATCAGAGCCGTGAAGGACTC 59.179 55.000 0.00 0.00 45.00 3.36
3835 3901 2.145397 TATCAGAGCCGTGAAGGACT 57.855 50.000 0.00 0.00 45.00 3.85
3836 3902 2.625790 AGATATCAGAGCCGTGAAGGAC 59.374 50.000 5.32 0.00 45.00 3.85
3837 3903 2.950781 AGATATCAGAGCCGTGAAGGA 58.049 47.619 5.32 0.00 45.00 3.36
3838 3904 3.742433 AAGATATCAGAGCCGTGAAGG 57.258 47.619 5.32 0.00 44.97 3.46
3839 3905 3.806521 CCAAAGATATCAGAGCCGTGAAG 59.193 47.826 5.32 0.00 0.00 3.02
3840 3906 3.197766 ACCAAAGATATCAGAGCCGTGAA 59.802 43.478 5.32 0.00 0.00 3.18
3841 3907 2.766263 ACCAAAGATATCAGAGCCGTGA 59.234 45.455 5.32 0.00 0.00 4.35
3842 3908 3.185246 ACCAAAGATATCAGAGCCGTG 57.815 47.619 5.32 0.00 0.00 4.94
3843 3909 3.738281 CGAACCAAAGATATCAGAGCCGT 60.738 47.826 5.32 0.00 0.00 5.68
3844 3910 2.797156 CGAACCAAAGATATCAGAGCCG 59.203 50.000 5.32 0.00 0.00 5.52
3845 3911 3.798202 ACGAACCAAAGATATCAGAGCC 58.202 45.455 5.32 0.00 0.00 4.70
3846 3912 5.348986 TGTACGAACCAAAGATATCAGAGC 58.651 41.667 5.32 0.00 0.00 4.09
3847 3913 9.186323 CTTATGTACGAACCAAAGATATCAGAG 57.814 37.037 5.32 0.00 0.00 3.35
3848 3914 8.692710 ACTTATGTACGAACCAAAGATATCAGA 58.307 33.333 5.32 0.00 0.00 3.27
3849 3915 8.873215 ACTTATGTACGAACCAAAGATATCAG 57.127 34.615 5.32 0.00 0.00 2.90
3850 3916 8.692710 AGACTTATGTACGAACCAAAGATATCA 58.307 33.333 5.32 0.00 0.00 2.15
3851 3917 9.530633 AAGACTTATGTACGAACCAAAGATATC 57.469 33.333 0.00 0.00 0.00 1.63
3852 3918 9.530633 GAAGACTTATGTACGAACCAAAGATAT 57.469 33.333 0.00 0.00 0.00 1.63
3853 3919 7.977853 GGAAGACTTATGTACGAACCAAAGATA 59.022 37.037 0.00 0.00 0.00 1.98
3854 3920 6.817140 GGAAGACTTATGTACGAACCAAAGAT 59.183 38.462 0.00 0.00 0.00 2.40
3855 3921 6.014840 AGGAAGACTTATGTACGAACCAAAGA 60.015 38.462 0.00 0.00 0.00 2.52
3856 3922 6.090898 CAGGAAGACTTATGTACGAACCAAAG 59.909 42.308 0.00 0.00 0.00 2.77
3857 3923 5.929992 CAGGAAGACTTATGTACGAACCAAA 59.070 40.000 0.00 0.00 0.00 3.28
3858 3924 5.244402 TCAGGAAGACTTATGTACGAACCAA 59.756 40.000 0.00 0.00 0.00 3.67
3859 3925 4.768448 TCAGGAAGACTTATGTACGAACCA 59.232 41.667 0.00 0.00 0.00 3.67
3860 3926 5.105837 ACTCAGGAAGACTTATGTACGAACC 60.106 44.000 0.00 0.00 0.00 3.62
3861 3927 5.952033 ACTCAGGAAGACTTATGTACGAAC 58.048 41.667 0.00 0.00 0.00 3.95
3862 3928 5.944599 AGACTCAGGAAGACTTATGTACGAA 59.055 40.000 0.00 0.00 0.00 3.85
3863 3929 5.498393 AGACTCAGGAAGACTTATGTACGA 58.502 41.667 0.00 0.00 0.00 3.43
3864 3930 5.821516 AGACTCAGGAAGACTTATGTACG 57.178 43.478 0.00 0.00 0.00 3.67
3865 3931 6.127952 ACGAAGACTCAGGAAGACTTATGTAC 60.128 42.308 0.00 0.00 39.59 2.90
3866 3932 5.944599 ACGAAGACTCAGGAAGACTTATGTA 59.055 40.000 0.00 0.00 39.59 2.29
3867 3933 4.767928 ACGAAGACTCAGGAAGACTTATGT 59.232 41.667 0.00 0.00 39.59 2.29
3868 3934 5.317733 ACGAAGACTCAGGAAGACTTATG 57.682 43.478 0.00 0.00 39.59 1.90
3869 3935 5.944599 TGTACGAAGACTCAGGAAGACTTAT 59.055 40.000 0.00 0.00 39.59 1.73
3870 3936 5.311265 TGTACGAAGACTCAGGAAGACTTA 58.689 41.667 0.00 0.00 39.59 2.24
3871 3937 4.142790 TGTACGAAGACTCAGGAAGACTT 58.857 43.478 0.00 0.00 41.72 3.01
3872 3938 3.752665 TGTACGAAGACTCAGGAAGACT 58.247 45.455 0.00 0.00 0.00 3.24
3873 3939 4.228317 GTTGTACGAAGACTCAGGAAGAC 58.772 47.826 0.00 0.00 0.00 3.01
3874 3940 3.058432 CGTTGTACGAAGACTCAGGAAGA 60.058 47.826 0.00 0.00 46.05 2.87
3875 3941 3.235195 CGTTGTACGAAGACTCAGGAAG 58.765 50.000 0.00 0.00 46.05 3.46
3876 3942 2.606308 GCGTTGTACGAAGACTCAGGAA 60.606 50.000 3.04 0.00 46.05 3.36
3877 3943 1.068748 GCGTTGTACGAAGACTCAGGA 60.069 52.381 3.04 0.00 46.05 3.86
3878 3944 1.337821 GCGTTGTACGAAGACTCAGG 58.662 55.000 3.04 0.00 46.05 3.86
3879 3945 0.975544 CGCGTTGTACGAAGACTCAG 59.024 55.000 0.00 0.00 46.05 3.35
3880 3946 0.308684 ACGCGTTGTACGAAGACTCA 59.691 50.000 5.58 0.00 46.05 3.41
3881 3947 0.973423 GACGCGTTGTACGAAGACTC 59.027 55.000 15.53 0.00 46.05 3.36
3882 3948 0.308684 TGACGCGTTGTACGAAGACT 59.691 50.000 15.53 0.00 46.05 3.24
3883 3949 1.057285 CATGACGCGTTGTACGAAGAC 59.943 52.381 15.53 0.00 46.05 3.01
3884 3950 1.333115 CATGACGCGTTGTACGAAGA 58.667 50.000 15.53 0.00 46.05 2.87
3885 3951 0.365523 CCATGACGCGTTGTACGAAG 59.634 55.000 15.53 0.00 46.05 3.79
3886 3952 1.009903 CCCATGACGCGTTGTACGAA 61.010 55.000 15.53 0.00 46.05 3.85
3887 3953 1.444724 CCCATGACGCGTTGTACGA 60.445 57.895 15.53 0.00 46.05 3.43
3888 3954 3.077705 CCCATGACGCGTTGTACG 58.922 61.111 15.53 0.17 45.88 3.67
3889 3955 2.746803 GGCCCATGACGCGTTGTAC 61.747 63.158 15.53 0.00 0.00 2.90
3890 3956 2.435234 GGCCCATGACGCGTTGTA 60.435 61.111 15.53 3.32 0.00 2.41
3893 3959 4.071875 TACGGCCCATGACGCGTT 62.072 61.111 15.53 0.00 0.00 4.84
3894 3960 4.807039 GTACGGCCCATGACGCGT 62.807 66.667 13.85 13.85 0.00 6.01
3895 3961 4.805231 TGTACGGCCCATGACGCG 62.805 66.667 3.53 3.53 0.00 6.01
3896 3962 1.817941 ATTGTACGGCCCATGACGC 60.818 57.895 0.00 0.00 0.00 5.19
3897 3963 0.742990 ACATTGTACGGCCCATGACG 60.743 55.000 0.00 0.00 0.00 4.35
3898 3964 0.732571 CACATTGTACGGCCCATGAC 59.267 55.000 0.00 0.00 0.00 3.06
3899 3965 0.393673 CCACATTGTACGGCCCATGA 60.394 55.000 0.00 0.00 0.00 3.07
3900 3966 2.003658 GCCACATTGTACGGCCCATG 62.004 60.000 6.85 0.00 40.07 3.66
3901 3967 1.752694 GCCACATTGTACGGCCCAT 60.753 57.895 6.85 0.00 40.07 4.00
3902 3968 2.360600 GCCACATTGTACGGCCCA 60.361 61.111 6.85 0.00 40.07 5.36
3905 3971 2.360600 TGGGCCACATTGTACGGC 60.361 61.111 0.00 9.17 45.47 5.68
3906 3972 1.748879 CCTGGGCCACATTGTACGG 60.749 63.158 0.00 0.00 0.00 4.02
3907 3973 0.107214 ATCCTGGGCCACATTGTACG 60.107 55.000 0.00 0.00 0.00 3.67
3908 3974 1.064758 TCATCCTGGGCCACATTGTAC 60.065 52.381 0.00 0.00 0.00 2.90
3909 3975 1.294041 TCATCCTGGGCCACATTGTA 58.706 50.000 0.00 0.00 0.00 2.41
3910 3976 0.409092 TTCATCCTGGGCCACATTGT 59.591 50.000 0.00 0.00 0.00 2.71
3911 3977 1.205417 GTTTCATCCTGGGCCACATTG 59.795 52.381 0.00 0.00 0.00 2.82
3912 3978 1.560505 GTTTCATCCTGGGCCACATT 58.439 50.000 0.00 0.00 0.00 2.71
3913 3979 0.324645 GGTTTCATCCTGGGCCACAT 60.325 55.000 0.00 0.00 0.00 3.21
3914 3980 1.076549 GGTTTCATCCTGGGCCACA 59.923 57.895 0.00 0.00 0.00 4.17
3915 3981 2.046285 CGGTTTCATCCTGGGCCAC 61.046 63.158 0.00 0.00 0.00 5.01
3916 3982 2.354729 CGGTTTCATCCTGGGCCA 59.645 61.111 5.85 5.85 0.00 5.36
3917 3983 1.749258 GACGGTTTCATCCTGGGCC 60.749 63.158 0.00 0.00 0.00 5.80
3918 3984 1.749258 GGACGGTTTCATCCTGGGC 60.749 63.158 0.00 0.00 31.75 5.36
3919 3985 1.200519 TAGGACGGTTTCATCCTGGG 58.799 55.000 2.98 0.00 45.30 4.45
3920 3986 2.170607 ACATAGGACGGTTTCATCCTGG 59.829 50.000 2.98 0.00 45.30 4.45
3921 3987 3.198068 CACATAGGACGGTTTCATCCTG 58.802 50.000 2.98 0.00 45.30 3.86
3923 3989 3.195661 GACACATAGGACGGTTTCATCC 58.804 50.000 0.00 0.00 34.98 3.51
3924 3990 3.118738 AGGACACATAGGACGGTTTCATC 60.119 47.826 0.00 0.00 0.00 2.92
3925 3991 2.838202 AGGACACATAGGACGGTTTCAT 59.162 45.455 0.00 0.00 0.00 2.57
3926 3992 2.232941 GAGGACACATAGGACGGTTTCA 59.767 50.000 0.00 0.00 0.00 2.69
3927 3993 2.232941 TGAGGACACATAGGACGGTTTC 59.767 50.000 0.00 0.00 0.00 2.78
3928 3994 2.233922 CTGAGGACACATAGGACGGTTT 59.766 50.000 0.00 0.00 0.00 3.27
3929 3995 1.825474 CTGAGGACACATAGGACGGTT 59.175 52.381 0.00 0.00 0.00 4.44
3930 3996 1.475403 CTGAGGACACATAGGACGGT 58.525 55.000 0.00 0.00 0.00 4.83
3931 3997 0.103208 GCTGAGGACACATAGGACGG 59.897 60.000 0.00 0.00 0.00 4.79
3932 3998 0.103208 GGCTGAGGACACATAGGACG 59.897 60.000 0.00 0.00 0.00 4.79
3933 3999 0.466124 GGGCTGAGGACACATAGGAC 59.534 60.000 0.00 0.00 0.00 3.85
3934 4000 0.042581 TGGGCTGAGGACACATAGGA 59.957 55.000 0.00 0.00 0.00 2.94
3935 4001 0.467384 CTGGGCTGAGGACACATAGG 59.533 60.000 0.00 0.00 0.00 2.57
3936 4002 0.179062 GCTGGGCTGAGGACACATAG 60.179 60.000 0.00 0.00 0.00 2.23
3937 4003 1.626356 GGCTGGGCTGAGGACACATA 61.626 60.000 0.00 0.00 0.00 2.29
3938 4004 2.673523 GCTGGGCTGAGGACACAT 59.326 61.111 0.00 0.00 0.00 3.21
3939 4005 3.640407 GGCTGGGCTGAGGACACA 61.640 66.667 0.00 0.00 0.00 3.72
3940 4006 4.416738 GGGCTGGGCTGAGGACAC 62.417 72.222 0.00 0.00 0.00 3.67
3941 4007 4.980592 TGGGCTGGGCTGAGGACA 62.981 66.667 0.00 0.00 0.00 4.02
3942 4008 4.416738 GTGGGCTGGGCTGAGGAC 62.417 72.222 0.00 0.00 0.00 3.85
3945 4011 4.421515 CTGGTGGGCTGGGCTGAG 62.422 72.222 0.00 0.00 0.00 3.35
3955 4021 0.758685 TTGTTTTCTGGCCTGGTGGG 60.759 55.000 10.07 0.00 38.36 4.61
3956 4022 1.001181 CATTGTTTTCTGGCCTGGTGG 59.999 52.381 10.07 0.00 0.00 4.61
3957 4023 1.688197 ACATTGTTTTCTGGCCTGGTG 59.312 47.619 10.07 0.00 0.00 4.17
3958 4024 1.688197 CACATTGTTTTCTGGCCTGGT 59.312 47.619 10.07 0.00 0.00 4.00
3959 4025 1.001181 CCACATTGTTTTCTGGCCTGG 59.999 52.381 10.07 0.00 0.00 4.45
3960 4026 1.688197 ACCACATTGTTTTCTGGCCTG 59.312 47.619 3.32 2.92 0.00 4.85
3961 4027 2.086610 ACCACATTGTTTTCTGGCCT 57.913 45.000 3.32 0.00 0.00 5.19
3962 4028 2.908688 AACCACATTGTTTTCTGGCC 57.091 45.000 0.00 0.00 0.00 5.36
3963 4029 4.518970 TCTCTAACCACATTGTTTTCTGGC 59.481 41.667 0.00 0.00 0.00 4.85
3964 4030 6.824305 ATCTCTAACCACATTGTTTTCTGG 57.176 37.500 0.00 0.00 0.00 3.86
3965 4031 8.553459 AGTATCTCTAACCACATTGTTTTCTG 57.447 34.615 0.00 0.00 0.00 3.02
3966 4032 9.003658 CAAGTATCTCTAACCACATTGTTTTCT 57.996 33.333 0.00 0.00 0.00 2.52
3967 4033 8.237267 CCAAGTATCTCTAACCACATTGTTTTC 58.763 37.037 0.00 0.00 0.00 2.29
3968 4034 7.176690 CCCAAGTATCTCTAACCACATTGTTTT 59.823 37.037 0.00 0.00 0.00 2.43
3969 4035 6.659242 CCCAAGTATCTCTAACCACATTGTTT 59.341 38.462 0.00 0.00 0.00 2.83
3970 4036 6.180472 CCCAAGTATCTCTAACCACATTGTT 58.820 40.000 0.00 0.00 0.00 2.83
3971 4037 5.250774 ACCCAAGTATCTCTAACCACATTGT 59.749 40.000 0.00 0.00 0.00 2.71
3972 4038 5.745227 ACCCAAGTATCTCTAACCACATTG 58.255 41.667 0.00 0.00 0.00 2.82
3973 4039 5.395324 CGACCCAAGTATCTCTAACCACATT 60.395 44.000 0.00 0.00 0.00 2.71
3974 4040 4.099573 CGACCCAAGTATCTCTAACCACAT 59.900 45.833 0.00 0.00 0.00 3.21
3975 4041 3.446161 CGACCCAAGTATCTCTAACCACA 59.554 47.826 0.00 0.00 0.00 4.17
3976 4042 3.181478 CCGACCCAAGTATCTCTAACCAC 60.181 52.174 0.00 0.00 0.00 4.16
3977 4043 3.028850 CCGACCCAAGTATCTCTAACCA 58.971 50.000 0.00 0.00 0.00 3.67
3978 4044 2.364647 CCCGACCCAAGTATCTCTAACC 59.635 54.545 0.00 0.00 0.00 2.85
3979 4045 3.067883 GTCCCGACCCAAGTATCTCTAAC 59.932 52.174 0.00 0.00 0.00 2.34
3980 4046 3.294214 GTCCCGACCCAAGTATCTCTAA 58.706 50.000 0.00 0.00 0.00 2.10
3981 4047 2.242965 TGTCCCGACCCAAGTATCTCTA 59.757 50.000 0.00 0.00 0.00 2.43
3982 4048 1.006758 TGTCCCGACCCAAGTATCTCT 59.993 52.381 0.00 0.00 0.00 3.10
3983 4049 1.481871 TGTCCCGACCCAAGTATCTC 58.518 55.000 0.00 0.00 0.00 2.75
3984 4050 3.703804 TGTCCCGACCCAAGTATCT 57.296 52.632 0.00 0.00 0.00 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.