Multiple sequence alignment - TraesCS7D01G299400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G299400 chr7D 100.000 6361 0 0 1 6361 379317814 379311454 0.000000e+00 11747.0
1 TraesCS7D01G299400 chr7D 94.474 380 17 3 1 376 219836638 219837017 3.310000e-162 582.0
2 TraesCS7D01G299400 chr7D 98.425 127 1 1 5657 5783 379312095 379311970 8.300000e-54 222.0
3 TraesCS7D01G299400 chr7D 98.425 127 1 1 5720 5845 379312158 379312032 8.300000e-54 222.0
4 TraesCS7D01G299400 chr7D 96.875 64 1 1 5657 5720 379312032 379311970 8.720000e-19 106.0
5 TraesCS7D01G299400 chr7D 96.875 64 1 1 5783 5845 379312158 379312095 8.720000e-19 106.0
6 TraesCS7D01G299400 chr7A 88.447 2415 168 45 2045 4416 427618777 427616431 0.000000e+00 2811.0
7 TraesCS7D01G299400 chr7A 91.852 1620 70 16 463 2046 427620440 427618847 0.000000e+00 2204.0
8 TraesCS7D01G299400 chr7A 90.000 1360 79 20 4409 5720 427616260 427614910 0.000000e+00 1705.0
9 TraesCS7D01G299400 chr7A 93.915 493 27 3 5783 6273 427614973 427614482 0.000000e+00 741.0
10 TraesCS7D01G299400 chr7A 100.000 64 0 0 5720 5783 427614973 427614910 1.120000e-22 119.0
11 TraesCS7D01G299400 chr7B 88.859 1472 82 26 2045 3487 374565213 374563795 0.000000e+00 1735.0
12 TraesCS7D01G299400 chr7B 91.612 1061 60 15 4677 5720 374561649 374560601 0.000000e+00 1439.0
13 TraesCS7D01G299400 chr7B 91.741 1005 61 14 3648 4644 374562638 374561648 0.000000e+00 1376.0
14 TraesCS7D01G299400 chr7B 91.035 792 36 15 1267 2046 374566047 374565279 0.000000e+00 1037.0
15 TraesCS7D01G299400 chr7B 89.076 714 38 12 377 1063 374566955 374566255 0.000000e+00 850.0
16 TraesCS7D01G299400 chr7B 97.551 245 5 1 5783 6026 374560664 374560420 9.860000e-113 418.0
17 TraesCS7D01G299400 chr7B 90.395 177 5 4 3488 3663 374562821 374562656 8.300000e-54 222.0
18 TraesCS7D01G299400 chr7B 98.438 64 1 0 5720 5783 374560664 374560601 5.210000e-21 113.0
19 TraesCS7D01G299400 chr7B 91.358 81 6 1 6219 6299 379068493 379068572 6.740000e-20 110.0
20 TraesCS7D01G299400 chr7B 98.039 51 1 0 6052 6102 374560422 374560372 8.780000e-14 89.8
21 TraesCS7D01G299400 chr3D 95.503 378 15 2 1 376 519301694 519301317 2.540000e-168 603.0
22 TraesCS7D01G299400 chr3B 95.251 379 16 2 1 377 690854309 690854687 3.280000e-167 599.0
23 TraesCS7D01G299400 chr3B 89.286 84 8 1 6216 6299 36124773 36124855 3.140000e-18 104.0
24 TraesCS7D01G299400 chr6A 94.531 384 18 2 1 381 105536657 105536274 1.980000e-164 590.0
25 TraesCS7D01G299400 chr3A 94.709 378 17 2 1 375 209407767 209408144 9.190000e-163 584.0
26 TraesCS7D01G299400 chr4B 94.681 376 19 1 1 375 385954486 385954111 3.310000e-162 582.0
27 TraesCS7D01G299400 chr4B 90.123 81 7 1 6219 6299 197729927 197729848 3.140000e-18 104.0
28 TraesCS7D01G299400 chr4B 90.123 81 7 1 6219 6299 205384179 205384258 3.140000e-18 104.0
29 TraesCS7D01G299400 chr4B 90.123 81 7 1 6219 6299 294942726 294942647 3.140000e-18 104.0
30 TraesCS7D01G299400 chr4B 90.123 81 7 1 6219 6299 315092548 315092627 3.140000e-18 104.0
31 TraesCS7D01G299400 chr4B 90.123 81 7 1 6219 6299 323572865 323572944 3.140000e-18 104.0
32 TraesCS7D01G299400 chr5A 94.241 382 17 4 1 377 16416219 16415838 4.280000e-161 579.0
33 TraesCS7D01G299400 chr4A 94.195 379 22 0 1 379 588511806 588511428 4.280000e-161 579.0
34 TraesCS7D01G299400 chr5D 94.195 379 21 1 1 379 355101960 355102337 1.540000e-160 577.0
35 TraesCS7D01G299400 chr4D 90.123 81 7 1 6219 6299 248125598 248125519 3.140000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G299400 chr7D 379311454 379317814 6360 True 11747.000000 11747 100.000000 1 6361 1 chr7D.!!$R1 6360
1 TraesCS7D01G299400 chr7A 427614482 427620440 5958 True 1516.000000 2811 92.842800 463 6273 5 chr7A.!!$R1 5810
2 TraesCS7D01G299400 chr7B 374560372 374566955 6583 True 808.866667 1735 92.971778 377 6102 9 chr7B.!!$R1 5725

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
209 210 0.040425 GTGCTAAACAGGCCAACGTG 60.040 55.000 5.01 0.00 37.69 4.49 F
991 1019 0.257039 GAGCACAGATGAACCCCCAT 59.743 55.000 0.00 0.00 0.00 4.00 F
2453 2618 0.034380 GGAAGGCCTACTTGGTTCCC 60.034 60.000 5.16 0.00 40.21 3.97 F
2558 2724 0.041535 TACCCCAGTGATACACCGGT 59.958 55.000 0.00 0.00 34.49 5.28 F
2715 2882 0.401395 AGACAACCCCTTCCTGGACA 60.401 55.000 0.00 0.00 38.35 4.02 F
3218 3406 0.887933 CACTGTTGGTGGCCAATACC 59.112 55.000 7.24 5.19 45.80 2.73 F
4634 6031 1.349688 TCCCATGTCAACACAGGTACC 59.650 52.381 2.73 2.73 35.41 3.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1946 2031 0.329261 ATGCCCTGAGTTAGCTGCAA 59.671 50.000 1.02 0.0 36.60 4.08 R
2744 2911 0.321919 GCCCTGACTGAATGCTCACA 60.322 55.000 0.00 0.0 0.00 3.58 R
3348 3536 1.338484 ACGACGTGCTAGTGGTCTCTA 60.338 52.381 0.00 0.0 0.00 2.43 R
3949 5150 2.231235 ACCCTAAATGCAAAAGCCTTCG 59.769 45.455 0.00 0.0 0.00 3.79 R
4329 5542 2.760634 TAGGAAGCACGCAATCAAGA 57.239 45.000 0.00 0.0 0.00 3.02 R
5025 6432 2.489329 ACTGCCACATGATGCAACTAAC 59.511 45.455 13.35 0.0 36.98 2.34 R
6038 7480 0.108851 CCCGCCAGCAAACATTAACC 60.109 55.000 0.00 0.0 0.00 2.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 4.087892 CCGTGTCTGGGCCTGGAG 62.088 72.222 10.79 0.00 0.00 3.86
53 54 4.087892 CGTGTCTGGGCCTGGAGG 62.088 72.222 10.79 0.21 38.53 4.30
91 92 2.203153 GGCACGGCCCGATTACAT 60.203 61.111 11.71 0.00 44.06 2.29
92 93 1.822186 GGCACGGCCCGATTACATT 60.822 57.895 11.71 0.00 44.06 2.71
93 94 1.381165 GGCACGGCCCGATTACATTT 61.381 55.000 11.71 0.00 44.06 2.32
94 95 0.454196 GCACGGCCCGATTACATTTT 59.546 50.000 11.71 0.00 0.00 1.82
95 96 1.135228 GCACGGCCCGATTACATTTTT 60.135 47.619 11.71 0.00 0.00 1.94
130 131 6.392911 ACATCTATATATGGCCCAACATGT 57.607 37.500 0.00 0.00 32.39 3.21
131 132 7.509236 ACATCTATATATGGCCCAACATGTA 57.491 36.000 0.00 0.00 32.39 2.29
132 133 7.927788 ACATCTATATATGGCCCAACATGTAA 58.072 34.615 0.00 0.00 30.02 2.41
133 134 8.390143 ACATCTATATATGGCCCAACATGTAAA 58.610 33.333 0.00 0.00 30.02 2.01
134 135 9.241919 CATCTATATATGGCCCAACATGTAAAA 57.758 33.333 0.00 0.00 30.02 1.52
135 136 9.821240 ATCTATATATGGCCCAACATGTAAAAA 57.179 29.630 0.00 0.00 30.02 1.94
136 137 9.821240 TCTATATATGGCCCAACATGTAAAAAT 57.179 29.630 0.00 0.00 30.02 1.82
139 140 5.612725 ATGGCCCAACATGTAAAAATAGG 57.387 39.130 0.00 0.00 0.00 2.57
140 141 3.196685 TGGCCCAACATGTAAAAATAGGC 59.803 43.478 0.00 4.05 37.14 3.93
141 142 3.450817 GGCCCAACATGTAAAAATAGGCT 59.549 43.478 0.00 0.00 37.98 4.58
142 143 4.647399 GGCCCAACATGTAAAAATAGGCTA 59.353 41.667 0.00 0.00 37.98 3.93
143 144 5.128008 GGCCCAACATGTAAAAATAGGCTAA 59.872 40.000 0.00 0.00 37.98 3.09
144 145 6.351456 GGCCCAACATGTAAAAATAGGCTAAA 60.351 38.462 0.00 0.00 37.98 1.85
145 146 7.100409 GCCCAACATGTAAAAATAGGCTAAAA 58.900 34.615 0.00 0.00 35.00 1.52
146 147 7.604545 GCCCAACATGTAAAAATAGGCTAAAAA 59.395 33.333 0.00 0.00 35.00 1.94
147 148 8.931775 CCCAACATGTAAAAATAGGCTAAAAAC 58.068 33.333 0.00 0.00 0.00 2.43
148 149 8.643752 CCAACATGTAAAAATAGGCTAAAAACG 58.356 33.333 0.00 0.00 0.00 3.60
149 150 7.806149 ACATGTAAAAATAGGCTAAAAACGC 57.194 32.000 0.00 0.00 0.00 4.84
150 151 7.599171 ACATGTAAAAATAGGCTAAAAACGCT 58.401 30.769 0.00 0.00 0.00 5.07
151 152 7.753580 ACATGTAAAAATAGGCTAAAAACGCTC 59.246 33.333 0.00 0.00 0.00 5.03
152 153 7.204496 TGTAAAAATAGGCTAAAAACGCTCA 57.796 32.000 0.00 0.00 0.00 4.26
153 154 7.302524 TGTAAAAATAGGCTAAAAACGCTCAG 58.697 34.615 0.00 0.00 0.00 3.35
154 155 5.959618 AAAATAGGCTAAAAACGCTCAGT 57.040 34.783 0.00 0.00 0.00 3.41
155 156 4.946784 AATAGGCTAAAAACGCTCAGTG 57.053 40.909 0.00 0.00 0.00 3.66
156 157 0.875059 AGGCTAAAAACGCTCAGTGC 59.125 50.000 0.00 0.00 38.57 4.40
168 169 3.536158 GCTCAGTGCGTCAAATAACAA 57.464 42.857 0.00 0.00 0.00 2.83
169 170 3.482786 GCTCAGTGCGTCAAATAACAAG 58.517 45.455 0.00 0.00 0.00 3.16
170 171 3.482786 CTCAGTGCGTCAAATAACAAGC 58.517 45.455 0.00 0.00 0.00 4.01
171 172 3.138304 TCAGTGCGTCAAATAACAAGCT 58.862 40.909 0.00 0.00 0.00 3.74
172 173 3.058983 TCAGTGCGTCAAATAACAAGCTG 60.059 43.478 0.00 0.00 0.00 4.24
173 174 3.058983 CAGTGCGTCAAATAACAAGCTGA 60.059 43.478 0.00 0.00 0.00 4.26
174 175 3.563808 AGTGCGTCAAATAACAAGCTGAA 59.436 39.130 0.00 0.00 0.00 3.02
175 176 4.036262 AGTGCGTCAAATAACAAGCTGAAA 59.964 37.500 0.00 0.00 0.00 2.69
176 177 4.737765 GTGCGTCAAATAACAAGCTGAAAA 59.262 37.500 0.00 0.00 0.00 2.29
177 178 5.402270 GTGCGTCAAATAACAAGCTGAAAAT 59.598 36.000 0.00 0.00 0.00 1.82
178 179 6.580791 GTGCGTCAAATAACAAGCTGAAAATA 59.419 34.615 0.00 0.00 0.00 1.40
179 180 7.273381 GTGCGTCAAATAACAAGCTGAAAATAT 59.727 33.333 0.00 0.00 0.00 1.28
180 181 7.273164 TGCGTCAAATAACAAGCTGAAAATATG 59.727 33.333 0.00 0.00 0.00 1.78
181 182 7.603515 CGTCAAATAACAAGCTGAAAATATGC 58.396 34.615 0.00 0.00 0.00 3.14
182 183 7.511965 CGTCAAATAACAAGCTGAAAATATGCG 60.512 37.037 0.00 0.00 0.00 4.73
183 184 6.751425 TCAAATAACAAGCTGAAAATATGCGG 59.249 34.615 0.00 0.00 0.00 5.69
184 185 2.566952 ACAAGCTGAAAATATGCGGC 57.433 45.000 0.00 0.00 36.66 6.53
185 186 1.134946 ACAAGCTGAAAATATGCGGCC 59.865 47.619 0.00 0.00 37.09 6.13
186 187 0.746659 AAGCTGAAAATATGCGGCCC 59.253 50.000 0.00 0.00 37.09 5.80
187 188 0.395586 AGCTGAAAATATGCGGCCCA 60.396 50.000 0.00 0.00 37.09 5.36
188 189 0.249031 GCTGAAAATATGCGGCCCAC 60.249 55.000 0.00 0.00 0.00 4.61
189 190 0.385390 CTGAAAATATGCGGCCCACC 59.615 55.000 0.00 0.00 0.00 4.61
199 200 2.281900 GGCCCACCGTGCTAAACA 60.282 61.111 0.00 0.00 0.00 2.83
200 201 2.332654 GGCCCACCGTGCTAAACAG 61.333 63.158 0.00 0.00 0.00 3.16
201 202 2.332654 GCCCACCGTGCTAAACAGG 61.333 63.158 0.00 0.00 0.00 4.00
202 203 2.332654 CCCACCGTGCTAAACAGGC 61.333 63.158 0.00 0.00 32.66 4.85
203 204 2.332654 CCACCGTGCTAAACAGGCC 61.333 63.158 0.00 0.00 32.66 5.19
204 205 1.599518 CACCGTGCTAAACAGGCCA 60.600 57.895 5.01 0.00 32.66 5.36
205 206 1.149627 ACCGTGCTAAACAGGCCAA 59.850 52.632 5.01 0.00 32.66 4.52
206 207 1.170290 ACCGTGCTAAACAGGCCAAC 61.170 55.000 5.01 0.00 32.66 3.77
207 208 1.206578 CGTGCTAAACAGGCCAACG 59.793 57.895 5.01 0.00 0.00 4.10
208 209 1.503818 CGTGCTAAACAGGCCAACGT 61.504 55.000 5.01 0.00 0.00 3.99
209 210 0.040425 GTGCTAAACAGGCCAACGTG 60.040 55.000 5.01 0.00 37.69 4.49
210 211 1.081442 GCTAAACAGGCCAACGTGC 60.081 57.895 5.01 0.00 35.01 5.34
220 221 3.591835 CAACGTGCCGGCCTGTTT 61.592 61.111 26.77 9.04 0.00 2.83
221 222 2.111460 AACGTGCCGGCCTGTTTA 59.889 55.556 26.77 0.00 0.00 2.01
222 223 2.255881 AACGTGCCGGCCTGTTTAC 61.256 57.895 26.77 13.53 0.00 2.01
223 224 2.358247 CGTGCCGGCCTGTTTACT 60.358 61.111 26.77 0.00 0.00 2.24
224 225 1.079681 CGTGCCGGCCTGTTTACTA 60.080 57.895 26.77 0.00 0.00 1.82
225 226 0.671163 CGTGCCGGCCTGTTTACTAA 60.671 55.000 26.77 0.00 0.00 2.24
226 227 0.800631 GTGCCGGCCTGTTTACTAAC 59.199 55.000 26.77 7.29 34.75 2.34
227 228 0.688487 TGCCGGCCTGTTTACTAACT 59.312 50.000 26.77 0.00 35.24 2.24
228 229 1.084289 GCCGGCCTGTTTACTAACTG 58.916 55.000 18.11 0.00 35.24 3.16
233 234 1.734163 CCTGTTTACTAACTGGGCCG 58.266 55.000 0.00 0.00 44.96 6.13
234 235 1.002773 CCTGTTTACTAACTGGGCCGT 59.997 52.381 0.00 0.00 44.96 5.68
235 236 2.073816 CTGTTTACTAACTGGGCCGTG 58.926 52.381 0.00 0.00 35.24 4.94
236 237 0.800631 GTTTACTAACTGGGCCGTGC 59.199 55.000 0.00 0.00 0.00 5.34
283 284 4.807039 GCACGACACGGCCCGTAT 62.807 66.667 9.25 0.00 38.32 3.06
284 285 2.800053 CACGACACGGCCCGTATA 59.200 61.111 9.25 0.00 38.32 1.47
285 286 1.298863 CACGACACGGCCCGTATAG 60.299 63.158 9.25 0.00 38.32 1.31
286 287 1.750399 ACGACACGGCCCGTATAGT 60.750 57.895 9.25 0.00 38.32 2.12
287 288 0.463654 ACGACACGGCCCGTATAGTA 60.464 55.000 9.25 0.00 38.32 1.82
288 289 0.662619 CGACACGGCCCGTATAGTAA 59.337 55.000 9.25 0.00 38.32 2.24
289 290 1.267806 CGACACGGCCCGTATAGTAAT 59.732 52.381 9.25 0.00 38.32 1.89
290 291 2.666619 CGACACGGCCCGTATAGTAATC 60.667 54.545 9.25 0.00 38.32 1.75
291 292 2.294233 GACACGGCCCGTATAGTAATCA 59.706 50.000 9.25 0.00 38.32 2.57
292 293 2.895404 ACACGGCCCGTATAGTAATCAT 59.105 45.455 9.25 0.00 38.32 2.45
293 294 3.250744 CACGGCCCGTATAGTAATCATG 58.749 50.000 9.25 0.00 38.32 3.07
294 295 2.268298 CGGCCCGTATAGTAATCATGC 58.732 52.381 0.00 0.00 0.00 4.06
295 296 2.629051 GGCCCGTATAGTAATCATGCC 58.371 52.381 0.00 0.00 0.00 4.40
296 297 2.236395 GGCCCGTATAGTAATCATGCCT 59.764 50.000 0.00 0.00 33.64 4.75
297 298 3.307480 GGCCCGTATAGTAATCATGCCTT 60.307 47.826 0.00 0.00 33.64 4.35
298 299 3.684788 GCCCGTATAGTAATCATGCCTTG 59.315 47.826 0.00 0.00 0.00 3.61
299 300 4.253685 CCCGTATAGTAATCATGCCTTGG 58.746 47.826 0.00 0.00 0.00 3.61
300 301 3.684788 CCGTATAGTAATCATGCCTTGGC 59.315 47.826 4.43 4.43 0.00 4.52
301 302 3.367932 CGTATAGTAATCATGCCTTGGCG 59.632 47.826 7.18 0.00 0.00 5.69
302 303 2.254546 TAGTAATCATGCCTTGGCGG 57.745 50.000 7.18 2.14 0.00 6.13
303 304 0.466189 AGTAATCATGCCTTGGCGGG 60.466 55.000 7.18 1.78 0.00 6.13
325 326 4.171103 GCCGGGCCAGGTACGATT 62.171 66.667 23.81 0.00 0.00 3.34
326 327 2.799452 GCCGGGCCAGGTACGATTA 61.799 63.158 23.81 0.00 0.00 1.75
327 328 1.068585 CCGGGCCAGGTACGATTAC 59.931 63.158 14.74 0.00 0.00 1.89
328 329 1.299620 CGGGCCAGGTACGATTACG 60.300 63.158 4.39 0.00 45.75 3.18
329 330 1.727511 CGGGCCAGGTACGATTACGA 61.728 60.000 4.39 0.00 42.66 3.43
330 331 0.677842 GGGCCAGGTACGATTACGAT 59.322 55.000 4.39 0.00 42.66 3.73
331 332 1.604693 GGGCCAGGTACGATTACGATG 60.605 57.143 4.39 0.00 42.66 3.84
332 333 1.604693 GGCCAGGTACGATTACGATGG 60.605 57.143 0.00 0.00 42.66 3.51
333 334 1.604693 GCCAGGTACGATTACGATGGG 60.605 57.143 0.00 0.00 42.66 4.00
334 335 1.604693 CCAGGTACGATTACGATGGGC 60.605 57.143 0.00 0.00 42.66 5.36
335 336 0.677842 AGGTACGATTACGATGGGCC 59.322 55.000 0.00 0.00 42.66 5.80
336 337 0.665369 GGTACGATTACGATGGGCCG 60.665 60.000 0.00 0.00 42.66 6.13
337 338 0.665369 GTACGATTACGATGGGCCGG 60.665 60.000 0.00 0.00 42.66 6.13
338 339 1.808531 TACGATTACGATGGGCCGGG 61.809 60.000 2.18 0.00 42.66 5.73
339 340 2.668550 GATTACGATGGGCCGGGC 60.669 66.667 22.00 22.00 0.00 6.13
375 376 3.918544 CCCGTTTGGCCAGGTATG 58.081 61.111 5.11 0.95 0.00 2.39
407 408 6.016610 CCAGATAATGTTTATAACCCCAACCG 60.017 42.308 0.00 0.00 0.00 4.44
420 421 1.674322 CAACCGATCCGTTTGGGCT 60.674 57.895 0.00 0.00 35.24 5.19
444 446 5.022122 TGAACATGATTTGCCCTAATGGAA 58.978 37.500 0.00 0.00 35.39 3.53
456 458 4.423732 CCCTAATGGAATGAACAAAAGCG 58.576 43.478 0.00 0.00 35.39 4.68
659 686 3.182341 TCTTTTTCTTCCGACCGTTCA 57.818 42.857 0.00 0.00 0.00 3.18
681 708 1.078528 CCCCTCAAAACCCCCTTCC 59.921 63.158 0.00 0.00 0.00 3.46
798 825 2.025510 CCAAATCTGCCTCTCCTTCCTT 60.026 50.000 0.00 0.00 0.00 3.36
799 826 3.277715 CAAATCTGCCTCTCCTTCCTTC 58.722 50.000 0.00 0.00 0.00 3.46
800 827 2.566708 ATCTGCCTCTCCTTCCTTCT 57.433 50.000 0.00 0.00 0.00 2.85
801 828 3.697190 ATCTGCCTCTCCTTCCTTCTA 57.303 47.619 0.00 0.00 0.00 2.10
802 829 3.025322 TCTGCCTCTCCTTCCTTCTAG 57.975 52.381 0.00 0.00 0.00 2.43
806 833 2.624557 GCCTCTCCTTCCTTCTAGTCCA 60.625 54.545 0.00 0.00 0.00 4.02
817 844 3.429547 CCTTCTAGTCCATCCAGTTCGTG 60.430 52.174 0.00 0.00 0.00 4.35
856 883 3.100671 GTGGTGGAGTAGAGACCAGAAT 58.899 50.000 0.00 0.00 40.46 2.40
857 884 3.515901 GTGGTGGAGTAGAGACCAGAATT 59.484 47.826 0.00 0.00 40.46 2.17
915 943 2.828549 CATGCCCCCACGTTAGCC 60.829 66.667 0.00 0.00 0.00 3.93
921 949 2.267961 CCCACGTTAGCCAGGTCC 59.732 66.667 0.00 0.00 0.00 4.46
988 1016 1.077429 GGGAGCACAGATGAACCCC 60.077 63.158 0.00 0.00 36.99 4.95
991 1019 0.257039 GAGCACAGATGAACCCCCAT 59.743 55.000 0.00 0.00 0.00 4.00
998 1026 3.723681 ACAGATGAACCCCCATCATGTAT 59.276 43.478 0.00 0.00 43.99 2.29
1206 1270 1.302907 AGGGGGCAGACTCATGATTT 58.697 50.000 0.00 0.00 0.00 2.17
1293 1358 5.017294 TCGTGTAAATGCAGACCATGATA 57.983 39.130 0.00 0.00 33.49 2.15
1433 1498 6.183360 CCAGTAATCATCTTGATTTGGGTGTC 60.183 42.308 7.94 0.00 44.03 3.67
1454 1519 2.219458 CCTCTCATGGCTTGCACATAG 58.781 52.381 0.00 0.00 0.00 2.23
1465 1530 3.187058 CACATAGGTGCGTTGCCC 58.813 61.111 0.00 0.00 38.37 5.36
1481 1546 3.281727 TGCCCCTTATAGCTTTCAGTG 57.718 47.619 0.00 0.00 0.00 3.66
1759 1826 2.852413 CGTGCTGATTAGAGTGGTAACG 59.148 50.000 0.00 0.00 42.51 3.18
1779 1855 8.898792 GGTAACGTAATTTGAATTGTTCTCAAC 58.101 33.333 0.00 0.00 36.33 3.18
1813 1889 3.275999 GTTGTCAAGTGTGTACAGGGTT 58.724 45.455 0.00 0.00 0.00 4.11
1827 1903 1.003118 CAGGGTTACCAGCTGCTTGTA 59.997 52.381 8.66 9.30 40.13 2.41
1854 1931 1.208776 TCTGATCTGTGCATCACCCTG 59.791 52.381 0.00 0.00 32.73 4.45
1868 1945 1.212688 CACCCTGGCATCAGAATACCA 59.787 52.381 0.00 0.00 43.49 3.25
1916 1999 5.186215 TGAGTATATGACGTTGAAGTTGGGA 59.814 40.000 0.00 0.00 0.00 4.37
1920 2003 1.418264 TGACGTTGAAGTTGGGATGGA 59.582 47.619 0.00 0.00 0.00 3.41
1921 2004 2.039746 TGACGTTGAAGTTGGGATGGAT 59.960 45.455 0.00 0.00 0.00 3.41
1946 2031 3.679389 CATCCTTAGGTGTGAGCTTGTT 58.321 45.455 0.00 0.00 0.00 2.83
1976 2061 1.955778 CTCAGGGCATGTGTGTTTTGA 59.044 47.619 0.00 0.00 0.00 2.69
1980 2065 4.128643 CAGGGCATGTGTGTTTTGAATTT 58.871 39.130 0.00 0.00 0.00 1.82
2019 2104 4.616802 GCATAAACACAACGAAACATCCTG 59.383 41.667 0.00 0.00 0.00 3.86
2037 2122 1.531149 CTGTGACCGCACCTACAAAAG 59.469 52.381 0.00 0.00 44.51 2.27
2050 2206 5.534654 CACCTACAAAAGTTCTCATTTGGGA 59.465 40.000 3.63 0.00 40.09 4.37
2105 2261 8.999431 TGTTTGACACTTTCTATGTATCCTTTC 58.001 33.333 0.00 0.00 0.00 2.62
2121 2277 7.676043 TGTATCCTTTCCCCAATGTATTCAAAA 59.324 33.333 0.00 0.00 0.00 2.44
2155 2311 7.139392 CACATTTGATGCTTATGATCTGAAGG 58.861 38.462 8.63 0.00 0.00 3.46
2178 2334 5.301555 GGACCTCAGATATGAAGTAAAGGC 58.698 45.833 0.00 0.00 0.00 4.35
2285 2442 8.588290 AAAAATCCTGTTGTTACTGGCATATA 57.412 30.769 0.00 0.00 41.70 0.86
2286 2443 7.807977 AAATCCTGTTGTTACTGGCATATAG 57.192 36.000 0.00 0.00 41.70 1.31
2287 2444 5.290493 TCCTGTTGTTACTGGCATATAGG 57.710 43.478 0.00 0.00 41.70 2.57
2367 2532 6.435164 AGGCTTTCTCATGTTTATACCCAAT 58.565 36.000 0.00 0.00 0.00 3.16
2450 2615 0.477795 AGGGGAAGGCCTACTTGGTT 60.478 55.000 5.16 0.00 40.21 3.67
2453 2618 0.034380 GGAAGGCCTACTTGGTTCCC 60.034 60.000 5.16 0.00 40.21 3.97
2454 2619 0.992695 GAAGGCCTACTTGGTTCCCT 59.007 55.000 5.16 0.00 40.21 4.20
2455 2620 1.354705 GAAGGCCTACTTGGTTCCCTT 59.645 52.381 5.16 0.00 40.21 3.95
2456 2621 1.456919 AGGCCTACTTGGTTCCCTTT 58.543 50.000 1.29 0.00 38.35 3.11
2554 2720 3.039011 AGGTCATACCCCAGTGATACAC 58.961 50.000 0.00 0.00 39.75 2.90
2558 2724 0.041535 TACCCCAGTGATACACCGGT 59.958 55.000 0.00 0.00 34.49 5.28
2559 2725 1.262640 ACCCCAGTGATACACCGGTC 61.263 60.000 2.59 0.00 34.49 4.79
2581 2747 5.420739 GTCTCTAACTTCCTCATCTCCACTT 59.579 44.000 0.00 0.00 0.00 3.16
2608 2774 2.445682 AACAACACACTTAAGCCCCA 57.554 45.000 1.29 0.00 0.00 4.96
2683 2850 0.551131 AGGGAGGGGCAAAGACTCAT 60.551 55.000 0.00 0.00 32.98 2.90
2689 2856 1.680249 GGGGCAAAGACTCATGAGACC 60.680 57.143 29.27 18.61 0.00 3.85
2691 2858 1.363744 GCAAAGACTCATGAGACCGG 58.636 55.000 29.27 15.12 0.00 5.28
2715 2882 0.401395 AGACAACCCCTTCCTGGACA 60.401 55.000 0.00 0.00 38.35 4.02
2812 2979 1.297689 CTGCTTGTAGCCTCTGCCA 59.702 57.895 0.00 0.00 41.51 4.92
2879 3046 4.017126 GTTTGGAGGGGAGAATTAGTTGG 58.983 47.826 0.00 0.00 0.00 3.77
2886 3053 3.370633 GGGGAGAATTAGTTGGACCAGTC 60.371 52.174 0.00 0.00 0.00 3.51
2912 3081 4.082845 TGGTTTGGACTTTGTGTGAAAGA 58.917 39.130 0.00 0.00 0.00 2.52
2913 3082 4.157656 TGGTTTGGACTTTGTGTGAAAGAG 59.842 41.667 0.00 0.00 0.00 2.85
2930 3099 3.930634 AGAGCAAAAATGTCTTCTGGC 57.069 42.857 0.00 0.00 0.00 4.85
2943 3112 1.421646 CTTCTGGCGGGGATTAAGGAT 59.578 52.381 0.00 0.00 0.00 3.24
2952 3121 4.687769 GCGGGGATTAAGGATGGAAAGTTA 60.688 45.833 0.00 0.00 0.00 2.24
2971 3140 8.998558 AAAGTTAAAGAAGTAACGGAAAATCG 57.001 30.769 0.00 0.00 38.71 3.34
2978 3147 4.985044 AGTAACGGAAAATCGTGAACAG 57.015 40.909 0.00 0.00 43.07 3.16
2990 3159 9.393249 GAAAATCGTGAACAGATTACATTGAAA 57.607 29.630 0.00 0.00 37.34 2.69
3072 3242 4.655649 GGAGGGCAAATAATTGATTTCCCT 59.344 41.667 12.79 12.79 46.78 4.20
3126 3314 7.058525 TCTGAGCAATAACTGATGAATTCCAT 58.941 34.615 2.27 0.00 38.43 3.41
3127 3315 7.012989 TCTGAGCAATAACTGATGAATTCCATG 59.987 37.037 2.27 0.00 35.17 3.66
3149 3337 6.861065 TGTATTTTTCAGTCAGAACAGGTC 57.139 37.500 0.00 0.00 35.56 3.85
3178 3366 4.061596 GACCTGGACTTTCAGTTTCTCAG 58.938 47.826 0.00 0.00 33.14 3.35
3187 3375 8.091449 GGACTTTCAGTTTCTCAGAAGATCTTA 58.909 37.037 8.25 0.00 0.00 2.10
3218 3406 0.887933 CACTGTTGGTGGCCAATACC 59.112 55.000 7.24 5.19 45.80 2.73
3335 3523 9.638176 ATCCTTTTTGATCATGCTAATAACTCT 57.362 29.630 0.00 0.00 0.00 3.24
3434 3622 7.059945 GCTGTTTCATTCTTTAATCTGTTGTCG 59.940 37.037 0.00 0.00 0.00 4.35
3568 4734 7.990886 TGAGGAACAGTTTTAGTATTGTGAACT 59.009 33.333 0.00 0.00 0.00 3.01
3575 4741 8.730680 CAGTTTTAGTATTGTGAACTTAGGCAT 58.269 33.333 0.00 0.00 0.00 4.40
3586 4752 6.116126 GTGAACTTAGGCATTCCACTAAGAT 58.884 40.000 15.88 6.26 45.63 2.40
3587 4753 6.599638 GTGAACTTAGGCATTCCACTAAGATT 59.400 38.462 15.88 8.10 45.63 2.40
3588 4754 7.769044 GTGAACTTAGGCATTCCACTAAGATTA 59.231 37.037 15.88 1.46 45.63 1.75
3589 4755 7.987458 TGAACTTAGGCATTCCACTAAGATTAG 59.013 37.037 15.88 0.00 45.63 1.73
3669 4869 9.467796 GGCTAGCCATTTAAGATTTTATAGGAT 57.532 33.333 29.33 0.00 35.81 3.24
3680 4880 5.944599 AGATTTTATAGGATCATGCTGCTGG 59.055 40.000 0.27 0.00 0.00 4.85
3681 4881 4.712051 TTTATAGGATCATGCTGCTGGT 57.288 40.909 0.27 0.00 0.00 4.00
3904 5105 8.079211 TCTGACAAATAGCTGGTAACTAGAAT 57.921 34.615 0.00 0.00 37.61 2.40
3992 5193 6.035843 GGTATGCAAAATGACACCTTACATG 58.964 40.000 0.00 0.00 0.00 3.21
4155 5357 8.737168 TTCTACTCTAGCGGTAAATGTAGTTA 57.263 34.615 18.83 11.25 0.00 2.24
4234 5436 6.716934 ACGGATGTATCACTTCTCTGTAAT 57.283 37.500 0.00 0.00 0.00 1.89
4329 5542 9.023962 TGCTAGTCTTAAAATGTTTGATGGAAT 57.976 29.630 0.00 0.00 0.00 3.01
4339 5552 4.735985 TGTTTGATGGAATCTTGATTGCG 58.264 39.130 9.61 0.00 45.81 4.85
4352 5565 3.266510 TGATTGCGTGCTTCCTATTCT 57.733 42.857 0.00 0.00 0.00 2.40
4354 5567 3.118629 TGATTGCGTGCTTCCTATTCTCT 60.119 43.478 0.00 0.00 0.00 3.10
4358 5571 3.384789 TGCGTGCTTCCTATTCTCTATGT 59.615 43.478 0.00 0.00 0.00 2.29
4507 5904 4.383552 CCCCTCTTAAACTCATCCTCAGTG 60.384 50.000 0.00 0.00 0.00 3.66
4519 5916 4.020751 TCATCCTCAGTGAAGAAGTTCCTG 60.021 45.833 0.00 0.00 34.63 3.86
4634 6031 1.349688 TCCCATGTCAACACAGGTACC 59.650 52.381 2.73 2.73 35.41 3.34
4656 6053 4.384647 CCCTGCTTCTTATTGCCTCTAGTT 60.385 45.833 0.00 0.00 0.00 2.24
4693 6090 5.605564 TTCCGTTTGTGATACAGTTGATG 57.394 39.130 0.00 0.00 0.00 3.07
4696 6093 4.397382 CGTTTGTGATACAGTTGATGCAG 58.603 43.478 0.00 0.00 0.00 4.41
4711 6108 6.987992 AGTTGATGCAGTTGTTTGATTTCATT 59.012 30.769 0.00 0.00 0.00 2.57
4715 6112 7.494952 TGATGCAGTTGTTTGATTTCATTTTGA 59.505 29.630 0.00 0.00 0.00 2.69
4780 6178 2.586425 CACTTCACCTTTGGGTCACAT 58.414 47.619 0.00 0.00 45.41 3.21
4781 6179 3.750371 CACTTCACCTTTGGGTCACATA 58.250 45.455 0.00 0.00 45.41 2.29
4782 6180 4.335416 CACTTCACCTTTGGGTCACATAT 58.665 43.478 0.00 0.00 45.41 1.78
4869 6269 1.601903 CACGTTTTAGCCAGAAGTGCA 59.398 47.619 0.00 0.00 0.00 4.57
4876 6276 6.487103 GTTTTAGCCAGAAGTGCATACATAC 58.513 40.000 0.00 0.00 0.00 2.39
4942 6342 6.987992 CAGCCAGGCATTGATGTTAAATTTAT 59.012 34.615 15.80 0.00 0.00 1.40
5025 6432 4.040461 TCTTGTCTTGAGGTTGGTCTTAGG 59.960 45.833 0.00 0.00 0.00 2.69
5033 6440 4.001652 GAGGTTGGTCTTAGGTTAGTTGC 58.998 47.826 0.00 0.00 0.00 4.17
5034 6441 3.393278 AGGTTGGTCTTAGGTTAGTTGCA 59.607 43.478 0.00 0.00 0.00 4.08
5062 6469 0.447801 CAGTATTTGCTCGTGGCCAC 59.552 55.000 26.78 26.78 40.92 5.01
5065 6472 1.305219 TATTTGCTCGTGGCCACAGC 61.305 55.000 34.58 34.58 40.92 4.40
5108 6515 2.336945 TCATATGAGGCAGCACTTGG 57.663 50.000 0.00 0.00 0.00 3.61
5187 6594 4.795469 TGTCACCTTGATCATTATGCCAT 58.205 39.130 0.00 0.00 0.00 4.40
5207 6614 6.317140 TGCCATTCTTCTTGTATCTCAACATC 59.683 38.462 0.00 0.00 32.18 3.06
5228 6635 7.918643 ACATCTTTTATGTTGGCTTTTTGTTG 58.081 30.769 0.00 0.00 0.00 3.33
5276 6683 8.836268 TTAGGTATTGTTATTATTGCCTACGG 57.164 34.615 0.00 0.00 0.00 4.02
5311 6718 6.159293 CAGCTACAAGTTCTTACAGATGTGA 58.841 40.000 0.00 0.00 0.00 3.58
5333 6740 1.654105 CGCTGTAATGAGGTTGTCGTC 59.346 52.381 0.00 0.00 0.00 4.20
5474 6882 7.847711 AGCTCCAGTCTACATATTATTGACT 57.152 36.000 0.00 0.00 38.36 3.41
5519 6927 3.698289 TGGAAACTGGTGGTGTAAAACA 58.302 40.909 0.00 0.00 0.00 2.83
5574 6983 2.365617 GCGAGATGGAATTCTGGGTCTA 59.634 50.000 5.23 0.00 0.00 2.59
5577 6986 4.039730 CGAGATGGAATTCTGGGTCTATGT 59.960 45.833 5.23 0.00 0.00 2.29
5578 6987 5.453903 CGAGATGGAATTCTGGGTCTATGTT 60.454 44.000 5.23 0.00 0.00 2.71
5579 6988 5.934781 AGATGGAATTCTGGGTCTATGTTC 58.065 41.667 5.23 0.00 0.00 3.18
5591 7015 6.539173 TGGGTCTATGTTCTTTTAGAGCAAA 58.461 36.000 10.28 0.00 42.15 3.68
5652 7094 2.229784 GCTGATTTGCAGTTTAGCTGGT 59.770 45.455 0.00 0.00 46.62 4.00
5653 7095 3.440173 GCTGATTTGCAGTTTAGCTGGTA 59.560 43.478 0.00 0.00 46.62 3.25
5654 7096 4.672801 GCTGATTTGCAGTTTAGCTGGTAC 60.673 45.833 0.00 0.00 46.62 3.34
5655 7097 4.651778 TGATTTGCAGTTTAGCTGGTACT 58.348 39.130 0.00 0.00 45.14 2.73
5656 7098 4.455533 TGATTTGCAGTTTAGCTGGTACTG 59.544 41.667 16.07 16.07 45.14 2.74
5657 7099 3.485463 TTGCAGTTTAGCTGGTACTGT 57.515 42.857 19.39 0.00 45.14 3.55
5658 7100 4.610605 TTGCAGTTTAGCTGGTACTGTA 57.389 40.909 19.39 14.97 45.14 2.74
5659 7101 4.610605 TGCAGTTTAGCTGGTACTGTAA 57.389 40.909 19.39 10.28 45.14 2.41
5660 7102 4.963373 TGCAGTTTAGCTGGTACTGTAAA 58.037 39.130 19.39 8.56 45.14 2.01
5661 7103 5.556915 TGCAGTTTAGCTGGTACTGTAAAT 58.443 37.500 19.39 0.00 45.14 1.40
5662 7104 6.001460 TGCAGTTTAGCTGGTACTGTAAATT 58.999 36.000 19.39 0.00 45.14 1.82
5663 7105 6.488683 TGCAGTTTAGCTGGTACTGTAAATTT 59.511 34.615 19.39 0.00 45.14 1.82
5664 7106 7.013846 TGCAGTTTAGCTGGTACTGTAAATTTT 59.986 33.333 19.39 0.00 45.14 1.82
5665 7107 7.865889 GCAGTTTAGCTGGTACTGTAAATTTTT 59.134 33.333 19.39 0.00 45.14 1.94
5670 7112 6.863275 AGCTGGTACTGTAAATTTTTATGGC 58.137 36.000 0.00 0.00 0.00 4.40
5671 7113 6.435904 AGCTGGTACTGTAAATTTTTATGGCA 59.564 34.615 0.00 0.00 0.00 4.92
5672 7114 7.039363 AGCTGGTACTGTAAATTTTTATGGCAA 60.039 33.333 0.00 0.00 0.00 4.52
5673 7115 7.275560 GCTGGTACTGTAAATTTTTATGGCAAG 59.724 37.037 0.00 0.00 0.00 4.01
5674 7116 8.410673 TGGTACTGTAAATTTTTATGGCAAGA 57.589 30.769 0.00 0.00 0.00 3.02
5675 7117 8.519526 TGGTACTGTAAATTTTTATGGCAAGAG 58.480 33.333 0.00 0.00 0.00 2.85
5676 7118 7.488150 GGTACTGTAAATTTTTATGGCAAGAGC 59.512 37.037 0.00 0.00 41.10 4.09
5688 7130 2.481289 GCAAGAGCCAAGAGGTACTT 57.519 50.000 0.00 0.00 39.70 2.24
5689 7131 2.351455 GCAAGAGCCAAGAGGTACTTC 58.649 52.381 0.00 0.00 36.61 3.01
5690 7132 2.289694 GCAAGAGCCAAGAGGTACTTCA 60.290 50.000 7.82 0.00 36.61 3.02
5691 7133 3.807209 GCAAGAGCCAAGAGGTACTTCAA 60.807 47.826 7.82 0.00 36.61 2.69
5692 7134 4.389374 CAAGAGCCAAGAGGTACTTCAAA 58.611 43.478 7.82 0.00 41.55 2.69
5693 7135 4.917906 AGAGCCAAGAGGTACTTCAAAT 57.082 40.909 7.82 0.00 41.55 2.32
5694 7136 5.248380 AGAGCCAAGAGGTACTTCAAATT 57.752 39.130 7.82 0.00 41.55 1.82
5695 7137 5.006386 AGAGCCAAGAGGTACTTCAAATTG 58.994 41.667 7.82 3.44 41.55 2.32
5696 7138 4.729868 AGCCAAGAGGTACTTCAAATTGT 58.270 39.130 7.82 0.00 41.55 2.71
5697 7139 5.876357 AGCCAAGAGGTACTTCAAATTGTA 58.124 37.500 7.82 0.00 41.55 2.41
5698 7140 5.705905 AGCCAAGAGGTACTTCAAATTGTAC 59.294 40.000 7.82 0.00 41.55 2.90
5706 7148 6.161911 GTACTTCAAATTGTACCCGAAGTC 57.838 41.667 6.38 0.00 43.82 3.01
5707 7149 4.070009 ACTTCAAATTGTACCCGAAGTCC 58.930 43.478 0.00 0.00 41.81 3.85
5708 7150 3.062122 TCAAATTGTACCCGAAGTCCC 57.938 47.619 0.00 0.00 0.00 4.46
5709 7151 2.640826 TCAAATTGTACCCGAAGTCCCT 59.359 45.455 0.00 0.00 0.00 4.20
5710 7152 3.839490 TCAAATTGTACCCGAAGTCCCTA 59.161 43.478 0.00 0.00 0.00 3.53
5711 7153 4.081309 TCAAATTGTACCCGAAGTCCCTAG 60.081 45.833 0.00 0.00 0.00 3.02
5712 7154 2.905415 TTGTACCCGAAGTCCCTAGA 57.095 50.000 0.00 0.00 0.00 2.43
5713 7155 2.905415 TGTACCCGAAGTCCCTAGAA 57.095 50.000 0.00 0.00 0.00 2.10
5714 7156 2.731572 TGTACCCGAAGTCCCTAGAAG 58.268 52.381 0.00 0.00 0.00 2.85
5715 7157 1.408340 GTACCCGAAGTCCCTAGAAGC 59.592 57.143 0.00 0.00 0.00 3.86
5716 7158 0.976590 ACCCGAAGTCCCTAGAAGCC 60.977 60.000 0.00 0.00 0.00 4.35
5717 7159 1.437986 CCGAAGTCCCTAGAAGCCG 59.562 63.158 0.00 0.00 0.00 5.52
5718 7160 1.227002 CGAAGTCCCTAGAAGCCGC 60.227 63.158 0.00 0.00 0.00 6.53
5769 7211 6.161911 GTACTTCAAATTGTACCCGAAGTC 57.838 41.667 6.38 0.00 43.82 3.01
5770 7212 4.070009 ACTTCAAATTGTACCCGAAGTCC 58.930 43.478 0.00 0.00 41.81 3.85
5771 7213 3.062122 TCAAATTGTACCCGAAGTCCC 57.938 47.619 0.00 0.00 0.00 4.46
5772 7214 2.640826 TCAAATTGTACCCGAAGTCCCT 59.359 45.455 0.00 0.00 0.00 4.20
5773 7215 3.839490 TCAAATTGTACCCGAAGTCCCTA 59.161 43.478 0.00 0.00 0.00 3.53
5774 7216 4.081309 TCAAATTGTACCCGAAGTCCCTAG 60.081 45.833 0.00 0.00 0.00 3.02
5775 7217 2.905415 TTGTACCCGAAGTCCCTAGA 57.095 50.000 0.00 0.00 0.00 2.43
5776 7218 2.905415 TGTACCCGAAGTCCCTAGAA 57.095 50.000 0.00 0.00 0.00 2.10
5777 7219 2.731572 TGTACCCGAAGTCCCTAGAAG 58.268 52.381 0.00 0.00 0.00 2.85
5778 7220 1.408340 GTACCCGAAGTCCCTAGAAGC 59.592 57.143 0.00 0.00 0.00 3.86
5779 7221 0.976590 ACCCGAAGTCCCTAGAAGCC 60.977 60.000 0.00 0.00 0.00 4.35
5780 7222 1.437986 CCGAAGTCCCTAGAAGCCG 59.562 63.158 0.00 0.00 0.00 5.52
5781 7223 1.227002 CGAAGTCCCTAGAAGCCGC 60.227 63.158 0.00 0.00 0.00 6.53
5782 7224 1.227002 GAAGTCCCTAGAAGCCGCG 60.227 63.158 0.00 0.00 0.00 6.46
5783 7225 1.946475 GAAGTCCCTAGAAGCCGCGT 61.946 60.000 4.92 0.00 0.00 6.01
5784 7226 0.682209 AAGTCCCTAGAAGCCGCGTA 60.682 55.000 4.92 0.00 0.00 4.42
5785 7227 0.467659 AGTCCCTAGAAGCCGCGTAT 60.468 55.000 4.92 0.00 0.00 3.06
5786 7228 1.202855 AGTCCCTAGAAGCCGCGTATA 60.203 52.381 4.92 0.00 0.00 1.47
5787 7229 1.817447 GTCCCTAGAAGCCGCGTATAT 59.183 52.381 4.92 0.00 0.00 0.86
5788 7230 2.230750 GTCCCTAGAAGCCGCGTATATT 59.769 50.000 4.92 0.00 0.00 1.28
5789 7231 2.895404 TCCCTAGAAGCCGCGTATATTT 59.105 45.455 4.92 0.00 0.00 1.40
5790 7232 3.322828 TCCCTAGAAGCCGCGTATATTTT 59.677 43.478 4.92 0.00 0.00 1.82
5791 7233 4.062991 CCCTAGAAGCCGCGTATATTTTT 58.937 43.478 4.92 0.00 0.00 1.94
5792 7234 5.010922 TCCCTAGAAGCCGCGTATATTTTTA 59.989 40.000 4.92 0.00 0.00 1.52
5793 7235 5.873164 CCCTAGAAGCCGCGTATATTTTTAT 59.127 40.000 4.92 0.00 0.00 1.40
5794 7236 6.183360 CCCTAGAAGCCGCGTATATTTTTATG 60.183 42.308 4.92 0.00 0.00 1.90
5795 7237 5.607119 AGAAGCCGCGTATATTTTTATGG 57.393 39.130 4.92 0.00 0.00 2.74
5796 7238 3.824414 AGCCGCGTATATTTTTATGGC 57.176 42.857 4.92 0.00 41.50 4.40
5797 7239 3.142951 AGCCGCGTATATTTTTATGGCA 58.857 40.909 4.92 0.00 43.59 4.92
5798 7240 3.566322 AGCCGCGTATATTTTTATGGCAA 59.434 39.130 4.92 0.00 43.59 4.52
5799 7241 3.911964 GCCGCGTATATTTTTATGGCAAG 59.088 43.478 4.92 0.00 40.88 4.01
5800 7242 4.319911 GCCGCGTATATTTTTATGGCAAGA 60.320 41.667 4.92 0.00 40.88 3.02
5801 7243 5.382303 CCGCGTATATTTTTATGGCAAGAG 58.618 41.667 4.92 0.00 0.00 2.85
5802 7244 4.846137 CGCGTATATTTTTATGGCAAGAGC 59.154 41.667 0.00 0.00 41.10 4.09
5814 7256 2.481289 GCAAGAGCCAAGAGGTACTT 57.519 50.000 0.00 0.00 39.70 2.24
5815 7257 2.351455 GCAAGAGCCAAGAGGTACTTC 58.649 52.381 0.00 0.00 36.61 3.01
5816 7258 2.289694 GCAAGAGCCAAGAGGTACTTCA 60.290 50.000 7.82 0.00 36.61 3.02
5817 7259 3.807209 GCAAGAGCCAAGAGGTACTTCAA 60.807 47.826 7.82 0.00 36.61 2.69
5818 7260 4.389374 CAAGAGCCAAGAGGTACTTCAAA 58.611 43.478 7.82 0.00 41.55 2.69
5819 7261 4.917906 AGAGCCAAGAGGTACTTCAAAT 57.082 40.909 7.82 0.00 41.55 2.32
5820 7262 5.248380 AGAGCCAAGAGGTACTTCAAATT 57.752 39.130 7.82 0.00 41.55 1.82
5821 7263 5.006386 AGAGCCAAGAGGTACTTCAAATTG 58.994 41.667 7.82 3.44 41.55 2.32
5822 7264 4.729868 AGCCAAGAGGTACTTCAAATTGT 58.270 39.130 7.82 0.00 41.55 2.71
5823 7265 5.876357 AGCCAAGAGGTACTTCAAATTGTA 58.124 37.500 7.82 0.00 41.55 2.41
5901 7343 4.703645 GGTTTAGAAGCCACTGGAATTC 57.296 45.455 0.00 0.00 0.00 2.17
5983 7425 1.829222 CTCAGCATTTTCTGGCCCATT 59.171 47.619 0.00 0.00 34.91 3.16
6029 7471 6.279513 TGTATGATGAACAATTTTGGACCC 57.720 37.500 0.00 0.00 0.00 4.46
6030 7472 5.777223 TGTATGATGAACAATTTTGGACCCA 59.223 36.000 0.00 0.00 0.00 4.51
6031 7473 4.599047 TGATGAACAATTTTGGACCCAC 57.401 40.909 0.00 0.00 0.00 4.61
6032 7474 3.963374 TGATGAACAATTTTGGACCCACA 59.037 39.130 0.00 0.00 0.00 4.17
6033 7475 4.592351 TGATGAACAATTTTGGACCCACAT 59.408 37.500 0.00 0.00 0.00 3.21
6034 7476 5.777223 TGATGAACAATTTTGGACCCACATA 59.223 36.000 0.00 0.00 0.00 2.29
6035 7477 6.268617 TGATGAACAATTTTGGACCCACATAA 59.731 34.615 0.00 0.00 0.00 1.90
6036 7478 5.848406 TGAACAATTTTGGACCCACATAAC 58.152 37.500 0.00 0.00 0.00 1.89
6037 7479 5.600484 TGAACAATTTTGGACCCACATAACT 59.400 36.000 0.00 0.00 0.00 2.24
6038 7480 5.467035 ACAATTTTGGACCCACATAACTG 57.533 39.130 0.00 0.00 0.00 3.16
6039 7481 4.283212 ACAATTTTGGACCCACATAACTGG 59.717 41.667 0.00 0.00 0.00 4.00
6040 7482 3.603965 TTTTGGACCCACATAACTGGT 57.396 42.857 0.00 0.00 34.33 4.00
6041 7483 3.603965 TTTGGACCCACATAACTGGTT 57.396 42.857 0.00 0.00 30.97 3.67
6042 7484 4.726035 TTTGGACCCACATAACTGGTTA 57.274 40.909 0.00 0.00 30.97 2.85
6043 7485 4.726035 TTGGACCCACATAACTGGTTAA 57.274 40.909 0.00 0.00 30.97 2.01
6044 7486 4.938575 TGGACCCACATAACTGGTTAAT 57.061 40.909 0.00 0.00 30.97 1.40
6045 7487 4.594970 TGGACCCACATAACTGGTTAATG 58.405 43.478 0.00 0.56 30.97 1.90
6046 7488 4.043561 TGGACCCACATAACTGGTTAATGT 59.956 41.667 0.00 1.46 30.97 2.71
6047 7489 5.014202 GGACCCACATAACTGGTTAATGTT 58.986 41.667 0.00 0.00 30.97 2.71
6048 7490 5.479027 GGACCCACATAACTGGTTAATGTTT 59.521 40.000 0.00 0.00 30.97 2.83
6049 7491 6.339587 ACCCACATAACTGGTTAATGTTTG 57.660 37.500 0.00 0.00 0.00 2.93
6050 7492 5.167845 CCCACATAACTGGTTAATGTTTGC 58.832 41.667 0.00 0.00 0.00 3.68
6051 7493 5.047377 CCCACATAACTGGTTAATGTTTGCT 60.047 40.000 0.00 0.00 0.00 3.91
6107 7577 7.467623 GCTGAGGATGACAATTTTAGTTAGTG 58.532 38.462 0.00 0.00 0.00 2.74
6114 7584 7.144722 TGACAATTTTAGTTAGTGAGCATGG 57.855 36.000 0.00 0.00 0.00 3.66
6171 7642 4.789784 TGCCGTACTTGCAAACTAAAATC 58.210 39.130 0.00 0.00 35.40 2.17
6175 7646 5.107220 CCGTACTTGCAAACTAAAATCGTCT 60.107 40.000 0.00 0.00 0.00 4.18
6184 7655 3.504863 ACTAAAATCGTCTTTAGCGCGA 58.495 40.909 12.10 0.00 40.91 5.87
6227 7698 5.948992 AAATGTTTGCAAGTACTCTCTCC 57.051 39.130 0.00 0.00 0.00 3.71
6246 7717 6.934645 TCTCTCCGTTTCAAATTACTTGTCAT 59.065 34.615 0.00 0.00 36.34 3.06
6320 7791 8.331931 ACATATAGTAATTCTGGACAAAGGGA 57.668 34.615 0.00 0.00 0.00 4.20
6321 7792 8.432805 ACATATAGTAATTCTGGACAAAGGGAG 58.567 37.037 0.00 0.00 0.00 4.30
6322 7793 6.893020 ATAGTAATTCTGGACAAAGGGAGT 57.107 37.500 0.00 0.00 0.00 3.85
6323 7794 7.989947 ATAGTAATTCTGGACAAAGGGAGTA 57.010 36.000 0.00 0.00 0.00 2.59
6324 7795 6.051179 AGTAATTCTGGACAAAGGGAGTAC 57.949 41.667 0.00 0.00 0.00 2.73
6325 7796 4.302559 AATTCTGGACAAAGGGAGTACC 57.697 45.455 0.00 0.00 40.67 3.34
6326 7797 2.409064 TCTGGACAAAGGGAGTACCA 57.591 50.000 0.00 0.00 43.89 3.25
6327 7798 2.915869 TCTGGACAAAGGGAGTACCAT 58.084 47.619 0.00 0.00 43.89 3.55
6328 7799 2.838202 TCTGGACAAAGGGAGTACCATC 59.162 50.000 0.00 0.00 43.89 3.51
6329 7800 2.840651 CTGGACAAAGGGAGTACCATCT 59.159 50.000 0.00 0.00 43.89 2.90
6330 7801 2.838202 TGGACAAAGGGAGTACCATCTC 59.162 50.000 0.00 0.00 43.89 2.75
6331 7802 3.108376 GGACAAAGGGAGTACCATCTCT 58.892 50.000 0.00 0.00 43.89 3.10
6332 7803 3.133183 GGACAAAGGGAGTACCATCTCTC 59.867 52.174 0.00 0.00 43.89 3.20
6333 7804 3.108376 ACAAAGGGAGTACCATCTCTCC 58.892 50.000 0.00 2.96 46.62 3.71
6337 7808 1.044611 GGAGTACCATCTCTCCCAGC 58.955 60.000 0.00 0.00 42.96 4.85
6338 7809 0.671251 GAGTACCATCTCTCCCAGCG 59.329 60.000 0.00 0.00 0.00 5.18
6339 7810 0.259065 AGTACCATCTCTCCCAGCGA 59.741 55.000 0.00 0.00 0.00 4.93
6340 7811 1.112113 GTACCATCTCTCCCAGCGAA 58.888 55.000 0.00 0.00 0.00 4.70
6341 7812 1.689273 GTACCATCTCTCCCAGCGAAT 59.311 52.381 0.00 0.00 0.00 3.34
6342 7813 0.467384 ACCATCTCTCCCAGCGAATG 59.533 55.000 0.00 0.00 0.00 2.67
6343 7814 0.467384 CCATCTCTCCCAGCGAATGT 59.533 55.000 0.00 0.00 0.00 2.71
6344 7815 1.539929 CCATCTCTCCCAGCGAATGTC 60.540 57.143 0.00 0.00 0.00 3.06
6345 7816 1.137675 CATCTCTCCCAGCGAATGTCA 59.862 52.381 0.00 0.00 0.00 3.58
6346 7817 0.820226 TCTCTCCCAGCGAATGTCAG 59.180 55.000 0.00 0.00 0.00 3.51
6347 7818 0.809241 CTCTCCCAGCGAATGTCAGC 60.809 60.000 0.00 0.00 0.00 4.26
6348 7819 1.220206 CTCCCAGCGAATGTCAGCT 59.780 57.895 0.00 0.00 45.74 4.24
6349 7820 0.461548 CTCCCAGCGAATGTCAGCTA 59.538 55.000 0.00 0.00 42.52 3.32
6350 7821 0.901827 TCCCAGCGAATGTCAGCTAA 59.098 50.000 0.00 0.00 42.52 3.09
6351 7822 1.277842 TCCCAGCGAATGTCAGCTAAA 59.722 47.619 0.00 0.00 42.52 1.85
6352 7823 2.092968 TCCCAGCGAATGTCAGCTAAAT 60.093 45.455 0.00 0.00 42.52 1.40
6353 7824 3.133901 TCCCAGCGAATGTCAGCTAAATA 59.866 43.478 0.00 0.00 42.52 1.40
6354 7825 3.496130 CCCAGCGAATGTCAGCTAAATAG 59.504 47.826 0.00 0.00 42.52 1.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 4.087892 CTCCAGGCCCAGACACGG 62.088 72.222 0.00 0.00 0.00 4.94
36 37 4.087892 CCTCCAGGCCCAGACACG 62.088 72.222 0.00 0.00 0.00 4.49
75 76 0.454196 AAAATGTAATCGGGCCGTGC 59.546 50.000 27.32 11.97 0.00 5.34
76 77 2.931512 AAAAATGTAATCGGGCCGTG 57.068 45.000 27.32 0.00 0.00 4.94
104 105 9.224486 ACATGTTGGGCCATATATAGATGTATA 57.776 33.333 14.29 0.00 0.00 1.47
105 106 8.106017 ACATGTTGGGCCATATATAGATGTAT 57.894 34.615 14.29 0.00 0.00 2.29
106 107 7.509236 ACATGTTGGGCCATATATAGATGTA 57.491 36.000 14.29 0.00 0.00 2.29
107 108 6.392911 ACATGTTGGGCCATATATAGATGT 57.607 37.500 7.26 9.71 0.00 3.06
108 109 8.806429 TTTACATGTTGGGCCATATATAGATG 57.194 34.615 7.26 8.99 0.00 2.90
109 110 9.821240 TTTTTACATGTTGGGCCATATATAGAT 57.179 29.630 7.26 0.00 0.00 1.98
110 111 9.821240 ATTTTTACATGTTGGGCCATATATAGA 57.179 29.630 7.26 0.00 0.00 1.98
113 114 9.034800 CCTATTTTTACATGTTGGGCCATATAT 57.965 33.333 7.26 0.00 0.00 0.86
114 115 7.039363 GCCTATTTTTACATGTTGGGCCATATA 60.039 37.037 7.26 0.00 0.00 0.86
115 116 6.239572 GCCTATTTTTACATGTTGGGCCATAT 60.240 38.462 7.26 1.89 0.00 1.78
116 117 5.069781 GCCTATTTTTACATGTTGGGCCATA 59.930 40.000 7.26 0.00 0.00 2.74
117 118 4.141733 GCCTATTTTTACATGTTGGGCCAT 60.142 41.667 7.26 0.00 0.00 4.40
118 119 3.196685 GCCTATTTTTACATGTTGGGCCA 59.803 43.478 0.00 0.00 0.00 5.36
119 120 3.450817 AGCCTATTTTTACATGTTGGGCC 59.549 43.478 15.83 0.00 37.98 5.80
120 121 4.736126 AGCCTATTTTTACATGTTGGGC 57.264 40.909 12.57 12.57 37.57 5.36
121 122 8.931775 GTTTTTAGCCTATTTTTACATGTTGGG 58.068 33.333 2.30 0.00 0.00 4.12
122 123 8.643752 CGTTTTTAGCCTATTTTTACATGTTGG 58.356 33.333 2.30 0.00 0.00 3.77
123 124 8.159709 GCGTTTTTAGCCTATTTTTACATGTTG 58.840 33.333 2.30 0.00 0.00 3.33
124 125 8.085909 AGCGTTTTTAGCCTATTTTTACATGTT 58.914 29.630 2.30 0.00 34.64 2.71
125 126 7.599171 AGCGTTTTTAGCCTATTTTTACATGT 58.401 30.769 2.69 2.69 34.64 3.21
126 127 7.753132 TGAGCGTTTTTAGCCTATTTTTACATG 59.247 33.333 0.00 0.00 34.64 3.21
127 128 7.822658 TGAGCGTTTTTAGCCTATTTTTACAT 58.177 30.769 0.00 0.00 34.64 2.29
128 129 7.040961 ACTGAGCGTTTTTAGCCTATTTTTACA 60.041 33.333 0.00 0.00 34.64 2.41
129 130 7.270579 CACTGAGCGTTTTTAGCCTATTTTTAC 59.729 37.037 0.00 0.00 34.64 2.01
130 131 7.302524 CACTGAGCGTTTTTAGCCTATTTTTA 58.697 34.615 0.00 0.00 34.64 1.52
131 132 6.149633 CACTGAGCGTTTTTAGCCTATTTTT 58.850 36.000 0.00 0.00 34.64 1.94
132 133 5.699839 CACTGAGCGTTTTTAGCCTATTTT 58.300 37.500 0.00 0.00 34.64 1.82
133 134 4.379499 GCACTGAGCGTTTTTAGCCTATTT 60.379 41.667 0.00 0.00 34.64 1.40
134 135 3.127030 GCACTGAGCGTTTTTAGCCTATT 59.873 43.478 0.00 0.00 34.64 1.73
135 136 2.678336 GCACTGAGCGTTTTTAGCCTAT 59.322 45.455 0.00 0.00 34.64 2.57
136 137 2.073816 GCACTGAGCGTTTTTAGCCTA 58.926 47.619 0.00 0.00 34.64 3.93
137 138 0.875059 GCACTGAGCGTTTTTAGCCT 59.125 50.000 0.00 0.00 34.64 4.58
138 139 3.384702 GCACTGAGCGTTTTTAGCC 57.615 52.632 0.00 0.00 34.64 3.93
148 149 3.482786 CTTGTTATTTGACGCACTGAGC 58.517 45.455 0.00 0.00 40.87 4.26
149 150 3.187227 AGCTTGTTATTTGACGCACTGAG 59.813 43.478 0.00 0.00 0.00 3.35
150 151 3.058983 CAGCTTGTTATTTGACGCACTGA 60.059 43.478 0.00 0.00 0.00 3.41
151 152 3.058983 TCAGCTTGTTATTTGACGCACTG 60.059 43.478 0.00 0.00 0.00 3.66
152 153 3.138304 TCAGCTTGTTATTTGACGCACT 58.862 40.909 0.00 0.00 0.00 4.40
153 154 3.536158 TCAGCTTGTTATTTGACGCAC 57.464 42.857 0.00 0.00 0.00 5.34
154 155 4.560136 TTTCAGCTTGTTATTTGACGCA 57.440 36.364 0.00 0.00 0.00 5.24
155 156 7.603515 CATATTTTCAGCTTGTTATTTGACGC 58.396 34.615 0.00 0.00 0.00 5.19
156 157 7.511965 CGCATATTTTCAGCTTGTTATTTGACG 60.512 37.037 0.00 0.00 0.00 4.35
157 158 7.253750 CCGCATATTTTCAGCTTGTTATTTGAC 60.254 37.037 0.00 0.00 0.00 3.18
158 159 6.751425 CCGCATATTTTCAGCTTGTTATTTGA 59.249 34.615 0.00 0.00 0.00 2.69
159 160 6.508404 GCCGCATATTTTCAGCTTGTTATTTG 60.508 38.462 0.00 0.00 0.00 2.32
160 161 5.519927 GCCGCATATTTTCAGCTTGTTATTT 59.480 36.000 0.00 0.00 0.00 1.40
161 162 5.043248 GCCGCATATTTTCAGCTTGTTATT 58.957 37.500 0.00 0.00 0.00 1.40
162 163 4.499696 GGCCGCATATTTTCAGCTTGTTAT 60.500 41.667 0.00 0.00 0.00 1.89
163 164 3.181491 GGCCGCATATTTTCAGCTTGTTA 60.181 43.478 0.00 0.00 0.00 2.41
164 165 2.417243 GGCCGCATATTTTCAGCTTGTT 60.417 45.455 0.00 0.00 0.00 2.83
165 166 1.134946 GGCCGCATATTTTCAGCTTGT 59.865 47.619 0.00 0.00 0.00 3.16
166 167 1.536709 GGGCCGCATATTTTCAGCTTG 60.537 52.381 0.00 0.00 0.00 4.01
167 168 0.746659 GGGCCGCATATTTTCAGCTT 59.253 50.000 0.00 0.00 0.00 3.74
168 169 0.395586 TGGGCCGCATATTTTCAGCT 60.396 50.000 0.00 0.00 0.00 4.24
169 170 0.249031 GTGGGCCGCATATTTTCAGC 60.249 55.000 13.30 0.00 0.00 4.26
170 171 0.385390 GGTGGGCCGCATATTTTCAG 59.615 55.000 20.39 0.00 0.00 3.02
171 172 2.499214 GGTGGGCCGCATATTTTCA 58.501 52.632 20.39 0.00 0.00 2.69
182 183 2.281900 TGTTTAGCACGGTGGGCC 60.282 61.111 10.60 0.00 0.00 5.80
183 184 2.332654 CCTGTTTAGCACGGTGGGC 61.333 63.158 10.60 0.00 0.00 5.36
184 185 2.332654 GCCTGTTTAGCACGGTGGG 61.333 63.158 10.60 1.67 0.00 4.61
185 186 2.332654 GGCCTGTTTAGCACGGTGG 61.333 63.158 10.60 0.00 0.00 4.61
186 187 1.169661 TTGGCCTGTTTAGCACGGTG 61.170 55.000 3.32 3.15 0.00 4.94
187 188 1.149627 TTGGCCTGTTTAGCACGGT 59.850 52.632 3.32 0.00 0.00 4.83
188 189 1.579429 GTTGGCCTGTTTAGCACGG 59.421 57.895 3.32 0.00 0.00 4.94
189 190 1.206578 CGTTGGCCTGTTTAGCACG 59.793 57.895 3.32 0.00 0.00 5.34
190 191 0.040425 CACGTTGGCCTGTTTAGCAC 60.040 55.000 3.32 0.00 0.00 4.40
191 192 1.791103 GCACGTTGGCCTGTTTAGCA 61.791 55.000 3.32 0.00 0.00 3.49
192 193 1.081442 GCACGTTGGCCTGTTTAGC 60.081 57.895 3.32 0.00 0.00 3.09
206 207 2.854945 GTTAGTAAACAGGCCGGCACG 61.855 57.143 30.85 20.95 43.34 5.34
207 208 0.800631 GTTAGTAAACAGGCCGGCAC 59.199 55.000 30.85 16.91 35.56 5.01
208 209 0.688487 AGTTAGTAAACAGGCCGGCA 59.312 50.000 30.85 2.40 38.12 5.69
209 210 1.084289 CAGTTAGTAAACAGGCCGGC 58.916 55.000 21.18 21.18 38.12 6.13
210 211 1.677820 CCCAGTTAGTAAACAGGCCGG 60.678 57.143 0.00 0.00 40.13 6.13
211 212 1.734163 CCCAGTTAGTAAACAGGCCG 58.266 55.000 0.00 0.00 40.13 6.13
212 213 1.460504 GCCCAGTTAGTAAACAGGCC 58.539 55.000 0.00 0.00 45.06 5.19
214 215 1.002773 ACGGCCCAGTTAGTAAACAGG 59.997 52.381 0.00 0.00 40.91 4.00
215 216 2.073816 CACGGCCCAGTTAGTAAACAG 58.926 52.381 0.00 0.00 38.12 3.16
216 217 1.878948 GCACGGCCCAGTTAGTAAACA 60.879 52.381 0.00 0.00 38.12 2.83
217 218 0.800631 GCACGGCCCAGTTAGTAAAC 59.199 55.000 0.00 0.00 35.72 2.01
218 219 0.321830 GGCACGGCCCAGTTAGTAAA 60.322 55.000 0.00 0.00 44.06 2.01
219 220 1.297364 GGCACGGCCCAGTTAGTAA 59.703 57.895 0.00 0.00 44.06 2.24
220 221 2.983791 GGCACGGCCCAGTTAGTA 59.016 61.111 0.00 0.00 44.06 1.82
266 267 3.414343 TATACGGGCCGTGTCGTGC 62.414 63.158 39.80 0.00 41.39 5.34
267 268 1.298863 CTATACGGGCCGTGTCGTG 60.299 63.158 39.80 22.36 41.39 4.35
268 269 0.463654 TACTATACGGGCCGTGTCGT 60.464 55.000 39.80 34.12 41.39 4.34
269 270 0.662619 TTACTATACGGGCCGTGTCG 59.337 55.000 39.80 30.60 41.39 4.35
270 271 2.294233 TGATTACTATACGGGCCGTGTC 59.706 50.000 39.80 23.33 41.39 3.67
271 272 2.309613 TGATTACTATACGGGCCGTGT 58.690 47.619 39.80 35.09 41.39 4.49
272 273 3.250744 CATGATTACTATACGGGCCGTG 58.749 50.000 39.80 26.05 41.39 4.94
273 274 2.353406 GCATGATTACTATACGGGCCGT 60.353 50.000 35.91 35.91 44.35 5.68
274 275 2.268298 GCATGATTACTATACGGGCCG 58.732 52.381 27.06 27.06 0.00 6.13
275 276 2.236395 AGGCATGATTACTATACGGGCC 59.764 50.000 0.00 0.00 39.14 5.80
276 277 3.611766 AGGCATGATTACTATACGGGC 57.388 47.619 0.00 0.00 0.00 6.13
277 278 4.253685 CCAAGGCATGATTACTATACGGG 58.746 47.826 0.00 0.00 0.00 5.28
278 279 3.684788 GCCAAGGCATGATTACTATACGG 59.315 47.826 6.14 0.00 41.49 4.02
279 280 3.367932 CGCCAAGGCATGATTACTATACG 59.632 47.826 12.19 0.00 42.06 3.06
280 281 3.684788 CCGCCAAGGCATGATTACTATAC 59.315 47.826 12.19 0.00 42.06 1.47
281 282 3.307410 CCCGCCAAGGCATGATTACTATA 60.307 47.826 12.19 0.00 42.06 1.31
282 283 2.553028 CCCGCCAAGGCATGATTACTAT 60.553 50.000 12.19 0.00 42.06 2.12
283 284 1.202758 CCCGCCAAGGCATGATTACTA 60.203 52.381 12.19 0.00 42.06 1.82
284 285 0.466189 CCCGCCAAGGCATGATTACT 60.466 55.000 12.19 0.00 42.06 2.24
285 286 2.032981 CCCGCCAAGGCATGATTAC 58.967 57.895 12.19 0.00 42.06 1.89
286 287 4.577152 CCCGCCAAGGCATGATTA 57.423 55.556 12.19 0.00 42.06 1.75
308 309 2.799452 TAATCGTACCTGGCCCGGC 61.799 63.158 14.06 0.00 0.00 6.13
309 310 1.068585 GTAATCGTACCTGGCCCGG 59.931 63.158 12.40 12.40 0.00 5.73
310 311 1.299620 CGTAATCGTACCTGGCCCG 60.300 63.158 0.00 0.00 0.00 6.13
311 312 0.677842 ATCGTAATCGTACCTGGCCC 59.322 55.000 0.00 0.00 38.33 5.80
312 313 1.604693 CCATCGTAATCGTACCTGGCC 60.605 57.143 0.00 0.00 38.33 5.36
313 314 1.604693 CCCATCGTAATCGTACCTGGC 60.605 57.143 0.00 0.00 38.33 4.85
314 315 1.604693 GCCCATCGTAATCGTACCTGG 60.605 57.143 0.00 0.00 38.33 4.45
315 316 1.604693 GGCCCATCGTAATCGTACCTG 60.605 57.143 0.00 0.00 38.33 4.00
316 317 0.677842 GGCCCATCGTAATCGTACCT 59.322 55.000 0.00 0.00 38.33 3.08
317 318 0.665369 CGGCCCATCGTAATCGTACC 60.665 60.000 0.00 0.00 38.33 3.34
318 319 0.665369 CCGGCCCATCGTAATCGTAC 60.665 60.000 0.00 0.00 38.33 3.67
319 320 1.661480 CCGGCCCATCGTAATCGTA 59.339 57.895 0.00 0.00 38.33 3.43
320 321 2.420043 CCGGCCCATCGTAATCGT 59.580 61.111 0.00 0.00 38.33 3.73
321 322 2.357034 CCCGGCCCATCGTAATCG 60.357 66.667 0.00 0.00 38.55 3.34
322 323 2.668550 GCCCGGCCCATCGTAATC 60.669 66.667 0.00 0.00 0.00 1.75
323 324 4.265056 GGCCCGGCCCATCGTAAT 62.265 66.667 18.83 0.00 44.06 1.89
358 359 1.752694 CCATACCTGGCCAAACGGG 60.753 63.158 7.01 7.12 42.81 5.28
359 360 3.918544 CCATACCTGGCCAAACGG 58.081 61.111 7.01 7.56 35.23 4.44
366 367 1.304879 TGGGCAAACCATACCTGGC 60.305 57.895 0.00 0.00 46.80 4.85
375 376 7.207383 GGTTATAAACATTATCTGGGCAAACC 58.793 38.462 0.00 0.00 40.81 3.27
388 389 4.891168 GGATCGGTTGGGGTTATAAACATT 59.109 41.667 2.32 0.00 0.00 2.71
390 391 3.682155 CGGATCGGTTGGGGTTATAAACA 60.682 47.826 2.32 0.00 0.00 2.83
407 408 1.243902 TGTTCAAGCCCAAACGGATC 58.756 50.000 0.00 0.00 0.00 3.36
420 421 5.022122 TCCATTAGGGCAAATCATGTTCAA 58.978 37.500 0.00 0.00 36.21 2.69
444 446 2.094545 GCAGGGATTCGCTTTTGTTCAT 60.095 45.455 0.00 0.00 0.00 2.57
456 458 2.035321 TGTTCGGTTTTTGCAGGGATTC 59.965 45.455 0.00 0.00 0.00 2.52
507 509 3.518992 TTTAAGGGCAGCTGGTTTAGT 57.481 42.857 17.12 0.00 0.00 2.24
659 686 4.295199 GGGGTTTTGAGGGGCGGT 62.295 66.667 0.00 0.00 0.00 5.68
798 825 2.100197 CCACGAACTGGATGGACTAGA 58.900 52.381 0.00 0.00 43.95 2.43
799 826 1.825474 ACCACGAACTGGATGGACTAG 59.175 52.381 0.00 0.00 43.95 2.57
800 827 1.548719 CACCACGAACTGGATGGACTA 59.451 52.381 0.00 0.00 43.95 2.59
801 828 0.321671 CACCACGAACTGGATGGACT 59.678 55.000 0.00 0.00 43.95 3.85
802 829 0.673644 CCACCACGAACTGGATGGAC 60.674 60.000 0.00 0.00 43.95 4.02
817 844 1.732683 CGCGGCAAACAAATCCACC 60.733 57.895 0.00 0.00 0.00 4.61
975 1003 2.304092 CATGATGGGGGTTCATCTGTG 58.696 52.381 6.43 2.72 42.82 3.66
979 1007 4.371624 TGATACATGATGGGGGTTCATC 57.628 45.455 0.00 0.00 42.72 2.92
988 1016 8.573885 AGCAATCTTTAACATGATACATGATGG 58.426 33.333 16.86 0.00 0.00 3.51
991 1019 9.276590 CCTAGCAATCTTTAACATGATACATGA 57.723 33.333 16.86 0.00 0.00 3.07
998 1026 4.883585 CCAGCCTAGCAATCTTTAACATGA 59.116 41.667 0.00 0.00 0.00 3.07
1293 1358 7.287005 TGGTTGACTCTAGATATTGTAATCGGT 59.713 37.037 0.00 0.00 0.00 4.69
1433 1498 0.395311 ATGTGCAAGCCATGAGAGGG 60.395 55.000 0.00 0.00 0.00 4.30
1464 1529 5.882557 ACATCAACACTGAAAGCTATAAGGG 59.117 40.000 0.00 0.00 37.60 3.95
1465 1530 6.992063 ACATCAACACTGAAAGCTATAAGG 57.008 37.500 0.00 0.00 37.60 2.69
1481 1546 5.342259 GCTGATACCAACGAAAAACATCAAC 59.658 40.000 0.00 0.00 0.00 3.18
1753 1820 8.898792 GTTGAGAACAATTCAAATTACGTTACC 58.101 33.333 0.00 0.00 36.41 2.85
1779 1855 8.559536 ACACACTTGACAACAATCTAAGTTATG 58.440 33.333 0.00 0.00 35.37 1.90
1813 1889 2.488204 TGCATTACAAGCAGCTGGTA 57.512 45.000 20.51 5.44 37.02 3.25
1854 1931 7.067494 ACTGAAGTAAAATGGTATTCTGATGCC 59.933 37.037 0.00 0.00 38.41 4.40
1868 1945 7.870954 TCATACGTGACTCAACTGAAGTAAAAT 59.129 33.333 0.00 0.00 0.00 1.82
1920 2003 2.158842 GCTCACACCTAAGGATGCTGAT 60.159 50.000 0.00 0.00 0.00 2.90
1921 2004 1.208052 GCTCACACCTAAGGATGCTGA 59.792 52.381 0.00 0.00 0.00 4.26
1946 2031 0.329261 ATGCCCTGAGTTAGCTGCAA 59.671 50.000 1.02 0.00 36.60 4.08
2019 2104 1.589803 ACTTTTGTAGGTGCGGTCAC 58.410 50.000 0.00 0.00 42.40 3.67
2050 2206 2.820197 TCTGCACACTGTATCTCGTTCT 59.180 45.455 0.00 0.00 0.00 3.01
2055 2211 5.595885 ACATGTATCTGCACACTGTATCTC 58.404 41.667 0.00 0.00 0.00 2.75
2105 2261 5.126061 CCTCTCACTTTTGAATACATTGGGG 59.874 44.000 0.00 0.00 0.00 4.96
2121 2277 2.089980 GCATCAAATGTGCCTCTCACT 58.910 47.619 0.00 0.00 45.81 3.41
2139 2295 3.387962 AGGTCCCTTCAGATCATAAGCA 58.612 45.455 0.00 0.00 0.00 3.91
2155 2311 5.301555 GCCTTTACTTCATATCTGAGGTCC 58.698 45.833 0.00 0.00 40.54 4.46
2178 2334 1.386533 AATGATTCTCAGGCAAGGCG 58.613 50.000 0.00 0.00 0.00 5.52
2187 2344 9.102757 GTTTATGTCTGAGCTTAATGATTCTCA 57.897 33.333 0.00 0.00 34.74 3.27
2260 2417 5.806654 ATGCCAGTAACAACAGGATTTTT 57.193 34.783 0.00 0.00 0.00 1.94
2285 2442 9.668497 GTTGAAATATAGTTTCCTAACTGACCT 57.332 33.333 0.00 0.00 44.22 3.85
2286 2443 8.890718 GGTTGAAATATAGTTTCCTAACTGACC 58.109 37.037 0.00 0.00 44.22 4.02
2287 2444 9.444600 TGGTTGAAATATAGTTTCCTAACTGAC 57.555 33.333 0.00 0.00 44.22 3.51
2323 2488 4.585581 GCCTTAGGTTTTGACCCTTGTAAA 59.414 41.667 0.00 0.00 33.35 2.01
2325 2490 3.396611 AGCCTTAGGTTTTGACCCTTGTA 59.603 43.478 0.00 0.00 33.35 2.41
2326 2491 2.177016 AGCCTTAGGTTTTGACCCTTGT 59.823 45.455 0.00 0.00 33.35 3.16
2327 2492 2.876581 AGCCTTAGGTTTTGACCCTTG 58.123 47.619 0.00 0.00 33.35 3.61
2333 2498 5.385198 ACATGAGAAAGCCTTAGGTTTTGA 58.615 37.500 17.54 2.41 43.54 2.69
2404 2569 4.258702 ACTTGTCACCACTCATACTCAC 57.741 45.455 0.00 0.00 0.00 3.51
2554 2720 3.292460 AGATGAGGAAGTTAGAGACCGG 58.708 50.000 0.00 0.00 0.00 5.28
2558 2724 5.199982 AGTGGAGATGAGGAAGTTAGAGA 57.800 43.478 0.00 0.00 0.00 3.10
2559 2725 5.930837 AAGTGGAGATGAGGAAGTTAGAG 57.069 43.478 0.00 0.00 0.00 2.43
2581 2747 5.336744 GCTTAAGTGTGTTGTTTTGTGCTA 58.663 37.500 4.02 0.00 0.00 3.49
2608 2774 9.743057 TTTGTTCAATTGATCGTTTCTAATTGT 57.257 25.926 9.40 0.00 39.96 2.71
2683 2850 0.606604 GTTGTCTAAGGCCGGTCTCA 59.393 55.000 10.20 0.00 0.00 3.27
2689 2856 0.392595 GAAGGGGTTGTCTAAGGCCG 60.393 60.000 0.00 0.00 0.00 6.13
2691 2858 0.992695 AGGAAGGGGTTGTCTAAGGC 59.007 55.000 0.00 0.00 0.00 4.35
2715 2882 2.440627 TGGCATCTACTCCATCTGCATT 59.559 45.455 0.00 0.00 34.56 3.56
2744 2911 0.321919 GCCCTGACTGAATGCTCACA 60.322 55.000 0.00 0.00 0.00 3.58
2827 2994 0.697658 TCCCATGCCACAGACAATCA 59.302 50.000 0.00 0.00 0.00 2.57
2886 3053 1.039856 CACAAAGTCCAAACCAGGGG 58.960 55.000 0.00 0.00 0.00 4.79
2912 3081 1.270550 CCGCCAGAAGACATTTTTGCT 59.729 47.619 0.00 0.00 0.00 3.91
2913 3082 1.669795 CCCGCCAGAAGACATTTTTGC 60.670 52.381 0.00 0.00 0.00 3.68
2930 3099 3.577805 ACTTTCCATCCTTAATCCCCG 57.422 47.619 0.00 0.00 0.00 5.73
2943 3112 7.862512 TTTCCGTTACTTCTTTAACTTTCCA 57.137 32.000 0.00 0.00 30.87 3.53
2952 3121 6.037391 TGTTCACGATTTTCCGTTACTTCTTT 59.963 34.615 0.00 0.00 41.29 2.52
2962 3131 5.524511 TGTAATCTGTTCACGATTTTCCG 57.475 39.130 0.00 0.00 33.47 4.30
2971 3140 6.970484 ACCTGTTTCAATGTAATCTGTTCAC 58.030 36.000 0.00 0.00 0.00 3.18
2990 3159 7.176690 CCCAATGTAGTTGATTCTTTAACCTGT 59.823 37.037 0.00 0.00 40.37 4.00
3126 3314 6.591935 AGACCTGTTCTGACTGAAAAATACA 58.408 36.000 0.00 0.00 36.30 2.29
3149 3337 1.699634 TGAAAGTCCAGGTCCTTCCAG 59.300 52.381 0.00 0.00 39.02 3.86
3187 3375 5.428253 CCACCAACAGTGCTAATACAGTAT 58.572 41.667 0.00 0.00 45.83 2.12
3218 3406 5.505173 AAAGATTGCAATCGGGACAATAG 57.495 39.130 28.88 0.00 40.35 1.73
3337 3525 9.765795 GTGCTAGTGGTCTCTATAATACAAAAT 57.234 33.333 0.00 0.00 0.00 1.82
3346 3534 3.129109 CGACGTGCTAGTGGTCTCTATA 58.871 50.000 0.00 0.00 0.00 1.31
3348 3536 1.338484 ACGACGTGCTAGTGGTCTCTA 60.338 52.381 0.00 0.00 0.00 2.43
3392 3580 4.640789 AACAGCTCTGTATAGTCCTTCG 57.359 45.455 2.62 0.00 44.13 3.79
3434 3622 7.881775 ATGATACCTTCCACCATAAAGAAAC 57.118 36.000 0.00 0.00 0.00 2.78
3575 4741 8.959548 TGTCGTGTATAACTAATCTTAGTGGAA 58.040 33.333 3.47 0.00 42.86 3.53
3748 4948 2.813754 TGCTTTCAGAATCCTTTCCACG 59.186 45.455 0.00 0.00 31.84 4.94
3949 5150 2.231235 ACCCTAAATGCAAAAGCCTTCG 59.769 45.455 0.00 0.00 0.00 3.79
4020 5221 7.914427 AAGTTTAGAACCTCCCAAGAATTTT 57.086 32.000 0.00 0.00 0.00 1.82
4155 5357 7.878477 CAGAATGCATGTGAAGTGTAAAATT 57.122 32.000 0.00 0.00 0.00 1.82
4194 5396 7.619964 ACATCCGTTAATTTTGGTACCTAAG 57.380 36.000 14.36 0.00 0.00 2.18
4277 5479 5.764131 CTGGTATCTCAGGATTCGAGTAAC 58.236 45.833 0.00 0.00 33.71 2.50
4297 5510 7.121168 TCAAACATTTTAAGACTAGCATCCTGG 59.879 37.037 0.00 0.00 0.00 4.45
4329 5542 2.760634 TAGGAAGCACGCAATCAAGA 57.239 45.000 0.00 0.00 0.00 3.02
4339 5552 9.717942 ATTCATTACATAGAGAATAGGAAGCAC 57.282 33.333 0.00 0.00 0.00 4.40
4372 5585 8.184304 AGTCATTTGAAGTTCTACACTCTAGT 57.816 34.615 4.17 0.00 32.94 2.57
4634 6031 4.414337 ACTAGAGGCAATAAGAAGCAGG 57.586 45.455 0.00 0.00 0.00 4.85
4661 6058 8.966069 TGTATCACAAACGGAATATATGGAAA 57.034 30.769 0.00 0.00 0.00 3.13
4663 6060 7.732025 ACTGTATCACAAACGGAATATATGGA 58.268 34.615 0.00 0.00 0.00 3.41
4664 6061 7.962964 ACTGTATCACAAACGGAATATATGG 57.037 36.000 0.00 0.00 0.00 2.74
4675 6072 5.362556 ACTGCATCAACTGTATCACAAAC 57.637 39.130 0.00 0.00 0.00 2.93
4682 6079 6.579666 ATCAAACAACTGCATCAACTGTAT 57.420 33.333 0.00 0.00 0.00 2.29
4685 6082 5.749588 TGAAATCAAACAACTGCATCAACTG 59.250 36.000 0.00 0.00 0.00 3.16
4711 6108 6.603940 AAGGCTGCCAAGTTAATATTCAAA 57.396 33.333 22.65 0.00 0.00 2.69
4715 6112 5.067283 CCGTAAAGGCTGCCAAGTTAATATT 59.933 40.000 22.65 0.00 0.00 1.28
4781 6179 9.872684 ATGGACAATGTTTTCTCAGGATTATAT 57.127 29.630 0.00 0.00 0.00 0.86
4876 6276 5.663795 AGCTTCATCGCTGTAATACAATG 57.336 39.130 0.00 0.00 39.16 2.82
5025 6432 2.489329 ACTGCCACATGATGCAACTAAC 59.511 45.455 13.35 0.00 36.98 2.34
5207 6614 8.711457 CCTATCAACAAAAAGCCAACATAAAAG 58.289 33.333 0.00 0.00 0.00 2.27
5212 6619 6.418057 TTCCTATCAACAAAAAGCCAACAT 57.582 33.333 0.00 0.00 0.00 2.71
5217 6624 8.607441 AAGAATTTTCCTATCAACAAAAAGCC 57.393 30.769 0.00 0.00 0.00 4.35
5276 6683 2.881352 GTAGCTGCAGACCGCGTC 60.881 66.667 20.43 2.66 46.97 5.19
5311 6718 2.066262 CGACAACCTCATTACAGCGTT 58.934 47.619 0.00 0.00 0.00 4.84
5333 6740 0.930310 ATCCATGTCGTTGAATCGCG 59.070 50.000 0.00 0.00 0.00 5.87
5474 6882 7.224362 CCATACAACAATTTGTCTTTGCTTCAA 59.776 33.333 1.83 0.00 42.67 2.69
5519 6927 9.890629 TCTATAGCTTCTACAAACAAACATGAT 57.109 29.630 0.00 0.00 0.00 2.45
5574 6983 7.212274 ACATGCTTTTTGCTCTAAAAGAACAT 58.788 30.769 16.61 10.30 44.22 2.71
5577 6986 7.940850 ACTACATGCTTTTTGCTCTAAAAGAA 58.059 30.769 16.61 9.34 44.22 2.52
5578 6987 7.510549 ACTACATGCTTTTTGCTCTAAAAGA 57.489 32.000 16.61 6.16 44.22 2.52
5579 6988 8.482429 CAAACTACATGCTTTTTGCTCTAAAAG 58.518 33.333 10.65 10.65 44.27 2.27
5591 7015 5.040635 CCACGAAAACAAACTACATGCTTT 58.959 37.500 0.00 0.00 0.00 3.51
5632 7056 4.697352 AGTACCAGCTAAACTGCAAATCAG 59.303 41.667 0.00 0.00 45.78 2.90
5669 7111 2.289694 TGAAGTACCTCTTGGCTCTTGC 60.290 50.000 0.00 0.00 36.40 4.01
5670 7112 3.685139 TGAAGTACCTCTTGGCTCTTG 57.315 47.619 0.00 0.00 36.40 3.02
5671 7113 4.706842 TTTGAAGTACCTCTTGGCTCTT 57.293 40.909 0.00 0.00 36.40 2.85
5672 7114 4.917906 ATTTGAAGTACCTCTTGGCTCT 57.082 40.909 0.00 0.00 36.40 4.09
5673 7115 4.762251 ACAATTTGAAGTACCTCTTGGCTC 59.238 41.667 2.79 0.00 36.40 4.70
5674 7116 4.729868 ACAATTTGAAGTACCTCTTGGCT 58.270 39.130 2.79 0.00 36.40 4.75
5675 7117 5.939457 GTACAATTTGAAGTACCTCTTGGC 58.061 41.667 2.79 0.00 36.40 4.52
5683 7125 5.121298 GGACTTCGGGTACAATTTGAAGTAC 59.879 44.000 13.69 11.73 46.62 2.73
5684 7126 5.240121 GGACTTCGGGTACAATTTGAAGTA 58.760 41.667 13.69 0.00 46.62 2.24
5686 7128 3.439129 GGGACTTCGGGTACAATTTGAAG 59.561 47.826 2.79 3.07 41.31 3.02
5687 7129 3.073356 AGGGACTTCGGGTACAATTTGAA 59.927 43.478 2.79 0.00 27.25 2.69
5688 7130 2.640826 AGGGACTTCGGGTACAATTTGA 59.359 45.455 2.79 0.00 27.25 2.69
5689 7131 3.067684 AGGGACTTCGGGTACAATTTG 57.932 47.619 0.00 0.00 27.25 2.32
5690 7132 4.098894 TCTAGGGACTTCGGGTACAATTT 58.901 43.478 0.00 0.00 41.75 1.82
5691 7133 3.716431 TCTAGGGACTTCGGGTACAATT 58.284 45.455 0.00 0.00 41.75 2.32
5692 7134 3.393426 TCTAGGGACTTCGGGTACAAT 57.607 47.619 0.00 0.00 41.75 2.71
5693 7135 2.905415 TCTAGGGACTTCGGGTACAA 57.095 50.000 0.00 0.00 41.75 2.41
5694 7136 2.731572 CTTCTAGGGACTTCGGGTACA 58.268 52.381 0.00 0.00 41.75 2.90
5695 7137 1.408340 GCTTCTAGGGACTTCGGGTAC 59.592 57.143 0.00 0.00 41.75 3.34
5696 7138 1.687368 GGCTTCTAGGGACTTCGGGTA 60.687 57.143 0.00 0.00 41.75 3.69
5697 7139 0.976590 GGCTTCTAGGGACTTCGGGT 60.977 60.000 0.00 0.00 41.75 5.28
5698 7140 1.823976 GGCTTCTAGGGACTTCGGG 59.176 63.158 0.00 0.00 41.75 5.14
5699 7141 1.437986 CGGCTTCTAGGGACTTCGG 59.562 63.158 0.00 0.00 41.75 4.30
5700 7142 1.227002 GCGGCTTCTAGGGACTTCG 60.227 63.158 0.00 0.00 41.75 3.79
5701 7143 1.227002 CGCGGCTTCTAGGGACTTC 60.227 63.158 0.00 0.00 41.75 3.01
5702 7144 0.682209 TACGCGGCTTCTAGGGACTT 60.682 55.000 12.47 0.00 41.75 3.01
5703 7145 0.467659 ATACGCGGCTTCTAGGGACT 60.468 55.000 12.47 0.00 46.37 3.85
5704 7146 1.242076 TATACGCGGCTTCTAGGGAC 58.758 55.000 12.47 0.00 0.00 4.46
5705 7147 2.211250 ATATACGCGGCTTCTAGGGA 57.789 50.000 12.47 0.00 0.00 4.20
5706 7148 3.314541 AAATATACGCGGCTTCTAGGG 57.685 47.619 12.47 0.00 0.00 3.53
5707 7149 6.183360 CCATAAAAATATACGCGGCTTCTAGG 60.183 42.308 12.47 0.00 0.00 3.02
5708 7150 6.672357 GCCATAAAAATATACGCGGCTTCTAG 60.672 42.308 12.47 0.00 35.39 2.43
5709 7151 5.121142 GCCATAAAAATATACGCGGCTTCTA 59.879 40.000 12.47 0.00 35.39 2.10
5710 7152 4.083484 GCCATAAAAATATACGCGGCTTCT 60.083 41.667 12.47 0.00 35.39 2.85
5711 7153 4.156182 GCCATAAAAATATACGCGGCTTC 58.844 43.478 12.47 0.00 35.39 3.86
5712 7154 3.566322 TGCCATAAAAATATACGCGGCTT 59.434 39.130 12.47 0.00 39.09 4.35
5713 7155 3.142951 TGCCATAAAAATATACGCGGCT 58.857 40.909 12.47 0.00 39.09 5.52
5714 7156 3.546002 TGCCATAAAAATATACGCGGC 57.454 42.857 12.47 0.00 38.79 6.53
5715 7157 5.351233 TCTTGCCATAAAAATATACGCGG 57.649 39.130 12.47 0.00 0.00 6.46
5716 7158 4.846137 GCTCTTGCCATAAAAATATACGCG 59.154 41.667 3.53 3.53 0.00 6.01
5762 7204 1.437986 CGGCTTCTAGGGACTTCGG 59.562 63.158 0.00 0.00 41.75 4.30
5763 7205 1.227002 GCGGCTTCTAGGGACTTCG 60.227 63.158 0.00 0.00 41.75 3.79
5764 7206 1.227002 CGCGGCTTCTAGGGACTTC 60.227 63.158 0.00 0.00 41.75 3.01
5765 7207 0.682209 TACGCGGCTTCTAGGGACTT 60.682 55.000 12.47 0.00 41.75 3.01
5766 7208 0.467659 ATACGCGGCTTCTAGGGACT 60.468 55.000 12.47 0.00 46.37 3.85
5767 7209 1.242076 TATACGCGGCTTCTAGGGAC 58.758 55.000 12.47 0.00 0.00 4.46
5768 7210 2.211250 ATATACGCGGCTTCTAGGGA 57.789 50.000 12.47 0.00 0.00 4.20
5769 7211 3.314541 AAATATACGCGGCTTCTAGGG 57.685 47.619 12.47 0.00 0.00 3.53
5770 7212 6.183360 CCATAAAAATATACGCGGCTTCTAGG 60.183 42.308 12.47 0.00 0.00 3.02
5771 7213 6.672357 GCCATAAAAATATACGCGGCTTCTAG 60.672 42.308 12.47 0.00 35.39 2.43
5772 7214 5.121142 GCCATAAAAATATACGCGGCTTCTA 59.879 40.000 12.47 0.00 35.39 2.10
5773 7215 4.083484 GCCATAAAAATATACGCGGCTTCT 60.083 41.667 12.47 0.00 35.39 2.85
5774 7216 4.156182 GCCATAAAAATATACGCGGCTTC 58.844 43.478 12.47 0.00 35.39 3.86
5775 7217 3.566322 TGCCATAAAAATATACGCGGCTT 59.434 39.130 12.47 0.00 39.09 4.35
5776 7218 3.142951 TGCCATAAAAATATACGCGGCT 58.857 40.909 12.47 0.00 39.09 5.52
5777 7219 3.546002 TGCCATAAAAATATACGCGGC 57.454 42.857 12.47 0.00 38.79 6.53
5778 7220 5.351233 TCTTGCCATAAAAATATACGCGG 57.649 39.130 12.47 0.00 0.00 6.46
5779 7221 4.846137 GCTCTTGCCATAAAAATATACGCG 59.154 41.667 3.53 3.53 0.00 6.01
5795 7237 2.289694 TGAAGTACCTCTTGGCTCTTGC 60.290 50.000 0.00 0.00 36.40 4.01
5796 7238 3.685139 TGAAGTACCTCTTGGCTCTTG 57.315 47.619 0.00 0.00 36.40 3.02
5797 7239 4.706842 TTTGAAGTACCTCTTGGCTCTT 57.293 40.909 0.00 0.00 36.40 2.85
5798 7240 4.917906 ATTTGAAGTACCTCTTGGCTCT 57.082 40.909 0.00 0.00 36.40 4.09
5799 7241 4.762251 ACAATTTGAAGTACCTCTTGGCTC 59.238 41.667 2.79 0.00 36.40 4.70
5800 7242 4.729868 ACAATTTGAAGTACCTCTTGGCT 58.270 39.130 2.79 0.00 36.40 4.75
5801 7243 5.939457 GTACAATTTGAAGTACCTCTTGGC 58.061 41.667 2.79 0.00 36.40 4.52
5808 7250 9.836379 AGGGACTTCGGTACAATTTGAAGTACC 62.836 44.444 23.87 23.87 46.52 3.34
5809 7251 5.121298 GGGACTTCGGTACAATTTGAAGTAC 59.879 44.000 2.79 13.58 39.80 2.73
5810 7252 5.012354 AGGGACTTCGGTACAATTTGAAGTA 59.988 40.000 2.79 0.00 27.25 2.24
5811 7253 4.070009 GGGACTTCGGTACAATTTGAAGT 58.930 43.478 2.79 13.12 0.00 3.01
5812 7254 4.324267 AGGGACTTCGGTACAATTTGAAG 58.676 43.478 2.79 2.73 27.25 3.02
5813 7255 4.360951 AGGGACTTCGGTACAATTTGAA 57.639 40.909 2.79 0.00 27.25 2.69
5814 7256 4.773674 TCTAGGGACTTCGGTACAATTTGA 59.226 41.667 2.79 0.00 41.75 2.69
5815 7257 5.080969 TCTAGGGACTTCGGTACAATTTG 57.919 43.478 0.00 0.00 41.75 2.32
5816 7258 5.731591 CTTCTAGGGACTTCGGTACAATTT 58.268 41.667 0.00 0.00 41.75 1.82
5817 7259 4.382793 GCTTCTAGGGACTTCGGTACAATT 60.383 45.833 0.00 0.00 41.75 2.32
5818 7260 3.132467 GCTTCTAGGGACTTCGGTACAAT 59.868 47.826 0.00 0.00 41.75 2.71
5819 7261 2.494870 GCTTCTAGGGACTTCGGTACAA 59.505 50.000 0.00 0.00 41.75 2.41
5820 7262 2.097825 GCTTCTAGGGACTTCGGTACA 58.902 52.381 0.00 0.00 41.75 2.90
5821 7263 1.408340 GGCTTCTAGGGACTTCGGTAC 59.592 57.143 0.00 0.00 41.75 3.34
5822 7264 1.772836 GGCTTCTAGGGACTTCGGTA 58.227 55.000 0.00 0.00 41.75 4.02
5823 7265 1.321074 CGGCTTCTAGGGACTTCGGT 61.321 60.000 0.00 0.00 41.75 4.69
5893 7335 9.965824 ATTTTGTGTACTTGTTTAGAATTCCAG 57.034 29.630 0.65 0.00 0.00 3.86
5901 7343 7.763172 TTGGCAATTTTGTGTACTTGTTTAG 57.237 32.000 0.00 0.00 0.00 1.85
5920 7362 9.066892 GTATATCTTTCATCACCTATTTTGGCA 57.933 33.333 0.00 0.00 0.00 4.92
6024 7466 4.595986 ACATTAACCAGTTATGTGGGTCC 58.404 43.478 0.00 0.00 42.54 4.46
6025 7467 6.386654 CAAACATTAACCAGTTATGTGGGTC 58.613 40.000 0.00 0.00 42.54 4.46
6026 7468 5.279256 GCAAACATTAACCAGTTATGTGGGT 60.279 40.000 0.00 0.00 42.54 4.51
6027 7469 5.047377 AGCAAACATTAACCAGTTATGTGGG 60.047 40.000 0.00 0.00 42.54 4.61
6028 7470 5.863397 CAGCAAACATTAACCAGTTATGTGG 59.137 40.000 0.00 0.00 44.01 4.17
6029 7471 5.863397 CCAGCAAACATTAACCAGTTATGTG 59.137 40.000 0.00 4.95 0.00 3.21
6030 7472 5.566627 GCCAGCAAACATTAACCAGTTATGT 60.567 40.000 0.00 0.00 0.00 2.29
6031 7473 4.864247 GCCAGCAAACATTAACCAGTTATG 59.136 41.667 0.00 0.00 0.00 1.90
6032 7474 4.380444 CGCCAGCAAACATTAACCAGTTAT 60.380 41.667 0.00 0.00 0.00 1.89
6033 7475 3.057876 CGCCAGCAAACATTAACCAGTTA 60.058 43.478 0.00 0.00 0.00 2.24
6034 7476 2.288152 CGCCAGCAAACATTAACCAGTT 60.288 45.455 0.00 0.00 0.00 3.16
6035 7477 1.269448 CGCCAGCAAACATTAACCAGT 59.731 47.619 0.00 0.00 0.00 4.00
6036 7478 1.402720 CCGCCAGCAAACATTAACCAG 60.403 52.381 0.00 0.00 0.00 4.00
6037 7479 0.600557 CCGCCAGCAAACATTAACCA 59.399 50.000 0.00 0.00 0.00 3.67
6038 7480 0.108851 CCCGCCAGCAAACATTAACC 60.109 55.000 0.00 0.00 0.00 2.85
6039 7481 0.885196 TCCCGCCAGCAAACATTAAC 59.115 50.000 0.00 0.00 0.00 2.01
6040 7482 1.476085 CATCCCGCCAGCAAACATTAA 59.524 47.619 0.00 0.00 0.00 1.40
6041 7483 1.102154 CATCCCGCCAGCAAACATTA 58.898 50.000 0.00 0.00 0.00 1.90
6042 7484 1.606885 CCATCCCGCCAGCAAACATT 61.607 55.000 0.00 0.00 0.00 2.71
6043 7485 2.053865 CCATCCCGCCAGCAAACAT 61.054 57.895 0.00 0.00 0.00 2.71
6044 7486 2.676121 CCATCCCGCCAGCAAACA 60.676 61.111 0.00 0.00 0.00 2.83
6045 7487 4.133796 GCCATCCCGCCAGCAAAC 62.134 66.667 0.00 0.00 0.00 2.93
6046 7488 4.675161 TGCCATCCCGCCAGCAAA 62.675 61.111 0.00 0.00 30.97 3.68
6047 7489 4.675161 TTGCCATCCCGCCAGCAA 62.675 61.111 0.00 0.00 42.60 3.91
6050 7492 3.136123 CAGTTGCCATCCCGCCAG 61.136 66.667 0.00 0.00 0.00 4.85
6051 7493 2.130821 TAACAGTTGCCATCCCGCCA 62.131 55.000 0.00 0.00 0.00 5.69
6151 7622 5.025986 ACGATTTTAGTTTGCAAGTACGG 57.974 39.130 0.00 0.00 0.00 4.02
6152 7623 5.912528 AGACGATTTTAGTTTGCAAGTACG 58.087 37.500 0.00 1.83 0.00 3.67
6155 7626 6.856426 GCTAAAGACGATTTTAGTTTGCAAGT 59.144 34.615 17.93 0.00 40.89 3.16
6171 7642 4.941727 TTATATTGTCGCGCTAAAGACG 57.058 40.909 5.56 0.00 40.05 4.18
6175 7646 5.209240 GGCAATTTATATTGTCGCGCTAAA 58.791 37.500 5.56 1.71 42.56 1.85
6207 7678 3.006967 ACGGAGAGAGTACTTGCAAACAT 59.993 43.478 0.00 0.00 0.00 2.71
6223 7694 8.610248 TTATGACAAGTAATTTGAAACGGAGA 57.390 30.769 0.00 0.00 39.21 3.71
6224 7695 9.672086 TTTTATGACAAGTAATTTGAAACGGAG 57.328 29.630 0.00 0.00 39.21 4.63
6294 7765 9.442062 TCCCTTTGTCCAGAATTACTATATGTA 57.558 33.333 0.00 0.00 0.00 2.29
6295 7766 8.331931 TCCCTTTGTCCAGAATTACTATATGT 57.668 34.615 0.00 0.00 0.00 2.29
6296 7767 8.432805 ACTCCCTTTGTCCAGAATTACTATATG 58.567 37.037 0.00 0.00 0.00 1.78
6297 7768 8.568617 ACTCCCTTTGTCCAGAATTACTATAT 57.431 34.615 0.00 0.00 0.00 0.86
6298 7769 7.989947 ACTCCCTTTGTCCAGAATTACTATA 57.010 36.000 0.00 0.00 0.00 1.31
6299 7770 6.893020 ACTCCCTTTGTCCAGAATTACTAT 57.107 37.500 0.00 0.00 0.00 2.12
6300 7771 6.155737 GGTACTCCCTTTGTCCAGAATTACTA 59.844 42.308 0.00 0.00 0.00 1.82
6301 7772 5.045797 GGTACTCCCTTTGTCCAGAATTACT 60.046 44.000 0.00 0.00 0.00 2.24
6302 7773 5.183969 GGTACTCCCTTTGTCCAGAATTAC 58.816 45.833 0.00 0.00 0.00 1.89
6303 7774 4.847512 TGGTACTCCCTTTGTCCAGAATTA 59.152 41.667 0.00 0.00 0.00 1.40
6304 7775 3.655777 TGGTACTCCCTTTGTCCAGAATT 59.344 43.478 0.00 0.00 0.00 2.17
6305 7776 3.256704 TGGTACTCCCTTTGTCCAGAAT 58.743 45.455 0.00 0.00 0.00 2.40
6306 7777 2.696775 TGGTACTCCCTTTGTCCAGAA 58.303 47.619 0.00 0.00 0.00 3.02
6307 7778 2.409064 TGGTACTCCCTTTGTCCAGA 57.591 50.000 0.00 0.00 0.00 3.86
6308 7779 2.840651 AGATGGTACTCCCTTTGTCCAG 59.159 50.000 0.00 0.00 0.00 3.86
6309 7780 2.838202 GAGATGGTACTCCCTTTGTCCA 59.162 50.000 0.00 0.00 0.00 4.02
6310 7781 3.108376 AGAGATGGTACTCCCTTTGTCC 58.892 50.000 0.00 0.00 37.60 4.02
6311 7782 3.133183 GGAGAGATGGTACTCCCTTTGTC 59.867 52.174 0.00 0.00 44.70 3.18
6312 7783 3.108376 GGAGAGATGGTACTCCCTTTGT 58.892 50.000 0.00 0.00 44.70 2.83
6313 7784 3.828875 GGAGAGATGGTACTCCCTTTG 57.171 52.381 0.00 0.00 44.70 2.77
6319 7790 0.671251 CGCTGGGAGAGATGGTACTC 59.329 60.000 0.00 0.00 37.19 2.59
6320 7791 0.259065 TCGCTGGGAGAGATGGTACT 59.741 55.000 0.00 0.00 0.00 2.73
6321 7792 1.112113 TTCGCTGGGAGAGATGGTAC 58.888 55.000 0.00 0.00 0.00 3.34
6322 7793 1.688735 CATTCGCTGGGAGAGATGGTA 59.311 52.381 0.00 0.00 0.00 3.25
6323 7794 0.467384 CATTCGCTGGGAGAGATGGT 59.533 55.000 0.00 0.00 0.00 3.55
6324 7795 0.467384 ACATTCGCTGGGAGAGATGG 59.533 55.000 8.96 0.00 0.00 3.51
6325 7796 1.137675 TGACATTCGCTGGGAGAGATG 59.862 52.381 4.03 4.03 0.00 2.90
6326 7797 1.411977 CTGACATTCGCTGGGAGAGAT 59.588 52.381 0.00 0.00 0.00 2.75
6327 7798 0.820226 CTGACATTCGCTGGGAGAGA 59.180 55.000 0.00 0.00 0.00 3.10
6328 7799 0.809241 GCTGACATTCGCTGGGAGAG 60.809 60.000 0.00 0.00 0.00 3.20
6329 7800 1.219124 GCTGACATTCGCTGGGAGA 59.781 57.895 0.00 0.00 0.00 3.71
6330 7801 0.461548 TAGCTGACATTCGCTGGGAG 59.538 55.000 0.00 0.00 37.05 4.30
6331 7802 0.901827 TTAGCTGACATTCGCTGGGA 59.098 50.000 0.00 0.00 37.05 4.37
6332 7803 1.737838 TTTAGCTGACATTCGCTGGG 58.262 50.000 0.00 0.00 37.05 4.45
6333 7804 3.059325 GCTATTTAGCTGACATTCGCTGG 60.059 47.826 0.00 0.00 45.62 4.85
6334 7805 4.125912 GCTATTTAGCTGACATTCGCTG 57.874 45.455 0.00 0.00 45.62 5.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.