Multiple sequence alignment - TraesCS7D01G296100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G296100 chr7D 100.000 4011 0 0 1 4011 371828688 371832698 0.000000e+00 7408.0
1 TraesCS7D01G296100 chr7D 86.950 659 70 8 3361 4010 329533955 329533304 0.000000e+00 726.0
2 TraesCS7D01G296100 chr7D 86.517 89 12 0 3238 3326 360553970 360553882 9.170000e-17 99.0
3 TraesCS7D01G296100 chr7D 97.500 40 1 0 1695 1734 442413225 442413264 7.190000e-08 69.4
4 TraesCS7D01G296100 chr7D 93.333 45 2 1 1690 1734 603292878 603292835 9.300000e-07 65.8
5 TraesCS7D01G296100 chr7A 94.394 1534 64 9 1740 3261 416468652 416470175 0.000000e+00 2337.0
6 TraesCS7D01G296100 chr7A 89.918 972 41 26 775 1699 416467696 416468657 0.000000e+00 1199.0
7 TraesCS7D01G296100 chr7A 93.039 431 25 3 336 766 416467221 416467646 3.400000e-175 625.0
8 TraesCS7D01G296100 chr7B 95.382 1321 53 4 1926 3239 367190476 367191795 0.000000e+00 2095.0
9 TraesCS7D01G296100 chr7B 91.925 904 39 14 435 1307 367158313 367159213 0.000000e+00 1234.0
10 TraesCS7D01G296100 chr7B 93.119 654 32 4 3361 4007 706521636 706522283 0.000000e+00 946.0
11 TraesCS7D01G296100 chr7B 91.945 658 38 6 3361 4011 552827740 552828389 0.000000e+00 907.0
12 TraesCS7D01G296100 chr7B 95.855 193 7 1 1740 1932 367185058 367185249 1.080000e-80 311.0
13 TraesCS7D01G296100 chr7B 88.942 208 12 5 1364 1570 367159218 367159415 3.100000e-61 246.0
14 TraesCS7D01G296100 chr7B 95.455 66 2 1 1634 1699 367184999 367185063 1.970000e-18 104.0
15 TraesCS7D01G296100 chr7B 100.000 49 0 0 1569 1617 367159439 367159487 1.540000e-14 91.6
16 TraesCS7D01G296100 chr7B 97.500 40 0 1 2479 2517 482485027 482484988 2.590000e-07 67.6
17 TraesCS7D01G296100 chr7B 97.368 38 1 0 1697 1734 67835590 67835553 9.300000e-07 65.8
18 TraesCS7D01G296100 chr5D 94.833 658 22 3 3361 4011 225792816 225792164 0.000000e+00 1016.0
19 TraesCS7D01G296100 chr5D 88.889 90 10 0 3237 3326 498297496 498297585 1.180000e-20 111.0
20 TraesCS7D01G296100 chr5D 97.436 39 1 0 2479 2517 482103349 482103311 2.590000e-07 67.6
21 TraesCS7D01G296100 chr1D 94.681 658 23 3 3361 4011 361392150 361392802 0.000000e+00 1011.0
22 TraesCS7D01G296100 chr1D 87.640 89 11 0 3238 3326 251711547 251711459 1.970000e-18 104.0
23 TraesCS7D01G296100 chr1D 97.436 39 0 1 2480 2517 70566949 70566987 9.300000e-07 65.8
24 TraesCS7D01G296100 chr1A 94.225 658 26 3 3361 4011 369592226 369591574 0.000000e+00 994.0
25 TraesCS7D01G296100 chr6D 94.073 658 27 3 3361 4011 224422874 224422222 0.000000e+00 989.0
26 TraesCS7D01G296100 chr6D 88.506 87 10 0 3238 3324 11717653 11717567 5.480000e-19 106.0
27 TraesCS7D01G296100 chr6A 93.997 633 26 4 3386 4011 277551665 277551038 0.000000e+00 948.0
28 TraesCS7D01G296100 chr6A 95.000 40 1 1 2479 2517 604890741 604890702 1.200000e-05 62.1
29 TraesCS7D01G296100 chr6B 91.489 658 43 5 3361 4011 290849211 290849862 0.000000e+00 893.0
30 TraesCS7D01G296100 chr6B 85.106 94 14 0 3233 3326 88842513 88842420 3.300000e-16 97.1
31 TraesCS7D01G296100 chr6B 85.106 94 14 0 3233 3326 88859990 88859897 3.300000e-16 97.1
32 TraesCS7D01G296100 chrUn 85.106 94 14 0 3233 3326 265419613 265419706 3.300000e-16 97.1
33 TraesCS7D01G296100 chr2A 85.870 92 12 1 3236 3326 477010265 477010356 3.300000e-16 97.1
34 TraesCS7D01G296100 chr5B 85.393 89 13 0 3238 3326 233447019 233446931 4.270000e-15 93.5
35 TraesCS7D01G296100 chr5A 90.196 51 4 1 1686 1735 131798441 131798391 9.300000e-07 65.8
36 TraesCS7D01G296100 chr3D 95.122 41 1 1 2478 2517 313307641 313307601 3.350000e-06 63.9
37 TraesCS7D01G296100 chr4B 95.000 40 1 1 2479 2517 492223533 492223494 1.200000e-05 62.1
38 TraesCS7D01G296100 chr1B 95.000 40 1 1 2479 2517 105576664 105576703 1.200000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G296100 chr7D 371828688 371832698 4010 False 7408.000000 7408 100.000000 1 4011 1 chr7D.!!$F1 4010
1 TraesCS7D01G296100 chr7D 329533304 329533955 651 True 726.000000 726 86.950000 3361 4010 1 chr7D.!!$R1 649
2 TraesCS7D01G296100 chr7A 416467221 416470175 2954 False 1387.000000 2337 92.450333 336 3261 3 chr7A.!!$F1 2925
3 TraesCS7D01G296100 chr7B 367190476 367191795 1319 False 2095.000000 2095 95.382000 1926 3239 1 chr7B.!!$F1 1313
4 TraesCS7D01G296100 chr7B 706521636 706522283 647 False 946.000000 946 93.119000 3361 4007 1 chr7B.!!$F3 646
5 TraesCS7D01G296100 chr7B 552827740 552828389 649 False 907.000000 907 91.945000 3361 4011 1 chr7B.!!$F2 650
6 TraesCS7D01G296100 chr7B 367158313 367159487 1174 False 523.866667 1234 93.622333 435 1617 3 chr7B.!!$F4 1182
7 TraesCS7D01G296100 chr5D 225792164 225792816 652 True 1016.000000 1016 94.833000 3361 4011 1 chr5D.!!$R1 650
8 TraesCS7D01G296100 chr1D 361392150 361392802 652 False 1011.000000 1011 94.681000 3361 4011 1 chr1D.!!$F2 650
9 TraesCS7D01G296100 chr1A 369591574 369592226 652 True 994.000000 994 94.225000 3361 4011 1 chr1A.!!$R1 650
10 TraesCS7D01G296100 chr6D 224422222 224422874 652 True 989.000000 989 94.073000 3361 4011 1 chr6D.!!$R2 650
11 TraesCS7D01G296100 chr6A 277551038 277551665 627 True 948.000000 948 93.997000 3386 4011 1 chr6A.!!$R1 625
12 TraesCS7D01G296100 chr6B 290849211 290849862 651 False 893.000000 893 91.489000 3361 4011 1 chr6B.!!$F1 650

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
187 188 0.039527 GGTGAACGGCGCAAGAAAAT 60.040 50.0 10.83 0.0 43.02 1.82 F
266 267 0.108992 TACGACACGTCCCATCTTGC 60.109 55.0 0.00 0.0 41.54 4.01 F
272 273 0.249120 ACGTCCCATCTTGCGATCAA 59.751 50.0 0.00 0.0 0.00 2.57 F
1735 1850 0.107165 GCCCGGCCTTAAACTGAGAT 60.107 55.0 0.00 0.0 0.00 2.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1716 1831 0.107165 ATCTCAGTTTAAGGCCGGGC 60.107 55.000 22.67 22.67 0.00 6.13 R
1717 1832 1.486726 AGATCTCAGTTTAAGGCCGGG 59.513 52.381 2.18 0.00 0.00 5.73 R
2139 2254 1.559682 GCCAAGGACCCAATCTCTGTA 59.440 52.381 0.00 0.00 0.00 2.74 R
3399 3530 0.037882 AGGCATCGACATAGGCATCG 60.038 55.000 0.00 0.00 39.72 3.84 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.895704 ACATCACTAAAACCCCCTGTT 57.104 42.857 0.00 0.00 39.43 3.16
22 23 3.763057 ACATCACTAAAACCCCCTGTTC 58.237 45.455 0.00 0.00 35.67 3.18
23 24 3.397955 ACATCACTAAAACCCCCTGTTCT 59.602 43.478 0.00 0.00 35.67 3.01
24 25 3.782656 TCACTAAAACCCCCTGTTCTC 57.217 47.619 0.00 0.00 35.67 2.87
25 26 2.038033 TCACTAAAACCCCCTGTTCTCG 59.962 50.000 0.00 0.00 35.67 4.04
26 27 1.350019 ACTAAAACCCCCTGTTCTCGG 59.650 52.381 0.00 0.00 35.67 4.63
27 28 1.350019 CTAAAACCCCCTGTTCTCGGT 59.650 52.381 0.00 0.00 35.67 4.69
28 29 0.554305 AAAACCCCCTGTTCTCGGTT 59.446 50.000 0.00 0.00 40.32 4.44
29 30 0.109913 AAACCCCCTGTTCTCGGTTC 59.890 55.000 0.00 0.00 37.62 3.62
30 31 2.108278 AACCCCCTGTTCTCGGTTCG 62.108 60.000 0.00 0.00 33.22 3.95
31 32 2.264794 CCCCTGTTCTCGGTTCGG 59.735 66.667 0.00 0.00 0.00 4.30
32 33 2.580601 CCCCTGTTCTCGGTTCGGT 61.581 63.158 0.00 0.00 0.00 4.69
33 34 1.252904 CCCCTGTTCTCGGTTCGGTA 61.253 60.000 0.00 0.00 0.00 4.02
34 35 0.822164 CCCTGTTCTCGGTTCGGTAT 59.178 55.000 0.00 0.00 0.00 2.73
35 36 1.206371 CCCTGTTCTCGGTTCGGTATT 59.794 52.381 0.00 0.00 0.00 1.89
36 37 2.268298 CCTGTTCTCGGTTCGGTATTG 58.732 52.381 0.00 0.00 0.00 1.90
37 38 1.659098 CTGTTCTCGGTTCGGTATTGC 59.341 52.381 0.00 0.00 0.00 3.56
38 39 0.643820 GTTCTCGGTTCGGTATTGCG 59.356 55.000 0.00 0.00 0.00 4.85
39 40 1.079875 TTCTCGGTTCGGTATTGCGC 61.080 55.000 0.00 0.00 0.00 6.09
40 41 1.518572 CTCGGTTCGGTATTGCGCT 60.519 57.895 9.73 0.00 0.00 5.92
41 42 1.079681 TCGGTTCGGTATTGCGCTT 60.080 52.632 9.73 0.00 0.00 4.68
42 43 1.060308 CGGTTCGGTATTGCGCTTG 59.940 57.895 9.73 0.00 0.00 4.01
43 44 1.355796 CGGTTCGGTATTGCGCTTGA 61.356 55.000 9.73 0.00 0.00 3.02
44 45 0.096454 GGTTCGGTATTGCGCTTGAC 59.904 55.000 9.73 3.02 0.00 3.18
45 46 0.096454 GTTCGGTATTGCGCTTGACC 59.904 55.000 9.73 11.93 0.00 4.02
46 47 0.320858 TTCGGTATTGCGCTTGACCA 60.321 50.000 20.19 8.70 31.89 4.02
47 48 1.017177 TCGGTATTGCGCTTGACCAC 61.017 55.000 20.19 6.36 31.89 4.16
48 49 1.423845 GGTATTGCGCTTGACCACG 59.576 57.895 9.73 0.00 31.89 4.94
49 50 1.423845 GTATTGCGCTTGACCACGG 59.576 57.895 9.73 0.00 0.00 4.94
50 51 1.004320 TATTGCGCTTGACCACGGT 60.004 52.632 9.73 0.00 0.00 4.83
51 52 1.295357 TATTGCGCTTGACCACGGTG 61.295 55.000 9.73 0.00 0.00 4.94
55 56 3.660111 GCTTGACCACGGTGCCAC 61.660 66.667 1.68 0.00 0.00 5.01
56 57 2.978010 CTTGACCACGGTGCCACC 60.978 66.667 2.98 2.98 34.05 4.61
82 83 2.588439 GGAACCGCCCTTACCTCC 59.412 66.667 0.00 0.00 0.00 4.30
83 84 2.588439 GAACCGCCCTTACCTCCC 59.412 66.667 0.00 0.00 0.00 4.30
84 85 3.013327 AACCGCCCTTACCTCCCC 61.013 66.667 0.00 0.00 0.00 4.81
85 86 3.574395 AACCGCCCTTACCTCCCCT 62.574 63.158 0.00 0.00 0.00 4.79
86 87 3.480133 CCGCCCTTACCTCCCCTG 61.480 72.222 0.00 0.00 0.00 4.45
87 88 3.480133 CGCCCTTACCTCCCCTGG 61.480 72.222 0.00 0.00 0.00 4.45
88 89 2.286197 GCCCTTACCTCCCCTGGT 60.286 66.667 0.00 0.00 43.66 4.00
89 90 2.376165 GCCCTTACCTCCCCTGGTC 61.376 68.421 0.00 0.00 41.22 4.02
90 91 1.396594 CCCTTACCTCCCCTGGTCT 59.603 63.158 0.00 0.00 41.22 3.85
91 92 0.983378 CCCTTACCTCCCCTGGTCTG 60.983 65.000 0.00 0.00 41.22 3.51
92 93 0.252742 CCTTACCTCCCCTGGTCTGT 60.253 60.000 0.00 0.00 41.22 3.41
93 94 1.196012 CTTACCTCCCCTGGTCTGTC 58.804 60.000 0.00 0.00 41.22 3.51
94 95 0.790993 TTACCTCCCCTGGTCTGTCT 59.209 55.000 0.00 0.00 41.22 3.41
95 96 0.041238 TACCTCCCCTGGTCTGTCTG 59.959 60.000 0.00 0.00 41.22 3.51
96 97 1.992277 CCTCCCCTGGTCTGTCTGG 60.992 68.421 0.00 0.00 0.00 3.86
97 98 1.229336 CTCCCCTGGTCTGTCTGGT 60.229 63.158 0.00 0.00 0.00 4.00
98 99 1.229209 TCCCCTGGTCTGTCTGGTC 60.229 63.158 0.00 0.00 0.00 4.02
99 100 2.650116 CCCCTGGTCTGTCTGGTCG 61.650 68.421 0.00 0.00 0.00 4.79
100 101 2.262915 CCTGGTCTGTCTGGTCGC 59.737 66.667 0.00 0.00 0.00 5.19
101 102 2.279069 CCTGGTCTGTCTGGTCGCT 61.279 63.158 0.00 0.00 0.00 4.93
102 103 1.214062 CTGGTCTGTCTGGTCGCTC 59.786 63.158 0.00 0.00 0.00 5.03
103 104 1.228583 TGGTCTGTCTGGTCGCTCT 60.229 57.895 0.00 0.00 0.00 4.09
104 105 0.827925 TGGTCTGTCTGGTCGCTCTT 60.828 55.000 0.00 0.00 0.00 2.85
105 106 0.389166 GGTCTGTCTGGTCGCTCTTG 60.389 60.000 0.00 0.00 0.00 3.02
106 107 0.598562 GTCTGTCTGGTCGCTCTTGA 59.401 55.000 0.00 0.00 0.00 3.02
107 108 1.000163 GTCTGTCTGGTCGCTCTTGAA 60.000 52.381 0.00 0.00 0.00 2.69
108 109 1.270826 TCTGTCTGGTCGCTCTTGAAG 59.729 52.381 0.00 0.00 0.00 3.02
109 110 1.000283 CTGTCTGGTCGCTCTTGAAGT 60.000 52.381 0.00 0.00 0.00 3.01
110 111 1.412710 TGTCTGGTCGCTCTTGAAGTT 59.587 47.619 0.00 0.00 0.00 2.66
111 112 2.062519 GTCTGGTCGCTCTTGAAGTTC 58.937 52.381 0.00 0.00 0.00 3.01
112 113 1.964223 TCTGGTCGCTCTTGAAGTTCT 59.036 47.619 4.17 0.00 0.00 3.01
113 114 3.057456 GTCTGGTCGCTCTTGAAGTTCTA 60.057 47.826 4.17 0.00 0.00 2.10
114 115 3.764434 TCTGGTCGCTCTTGAAGTTCTAT 59.236 43.478 4.17 0.00 0.00 1.98
115 116 3.849911 TGGTCGCTCTTGAAGTTCTATG 58.150 45.455 4.17 0.00 0.00 2.23
116 117 3.190874 GGTCGCTCTTGAAGTTCTATGG 58.809 50.000 4.17 0.00 0.00 2.74
117 118 3.368531 GGTCGCTCTTGAAGTTCTATGGT 60.369 47.826 4.17 0.00 0.00 3.55
118 119 3.614616 GTCGCTCTTGAAGTTCTATGGTG 59.385 47.826 4.17 0.16 0.00 4.17
119 120 2.932614 CGCTCTTGAAGTTCTATGGTGG 59.067 50.000 4.17 0.00 0.00 4.61
120 121 3.274288 GCTCTTGAAGTTCTATGGTGGG 58.726 50.000 4.17 0.00 0.00 4.61
121 122 3.307762 GCTCTTGAAGTTCTATGGTGGGT 60.308 47.826 4.17 0.00 0.00 4.51
122 123 4.508662 CTCTTGAAGTTCTATGGTGGGTC 58.491 47.826 4.17 0.00 0.00 4.46
123 124 3.056107 TCTTGAAGTTCTATGGTGGGTCG 60.056 47.826 4.17 0.00 0.00 4.79
124 125 1.066430 TGAAGTTCTATGGTGGGTCGC 60.066 52.381 4.17 0.00 0.00 5.19
125 126 0.108329 AAGTTCTATGGTGGGTCGCG 60.108 55.000 0.00 0.00 0.00 5.87
126 127 1.520787 GTTCTATGGTGGGTCGCGG 60.521 63.158 6.13 0.00 0.00 6.46
127 128 1.985662 TTCTATGGTGGGTCGCGGT 60.986 57.895 6.13 0.00 0.00 5.68
128 129 2.202878 CTATGGTGGGTCGCGGTG 60.203 66.667 6.13 0.00 0.00 4.94
129 130 3.733344 CTATGGTGGGTCGCGGTGG 62.733 68.421 6.13 0.00 0.00 4.61
145 146 2.833121 GGGCCGCCCGATGAAAAT 60.833 61.111 14.19 0.00 32.13 1.82
146 147 2.721859 GGCCGCCCGATGAAAATC 59.278 61.111 0.00 0.00 0.00 2.17
147 148 2.118404 GGCCGCCCGATGAAAATCA 61.118 57.895 0.00 0.00 0.00 2.57
148 149 1.455383 GGCCGCCCGATGAAAATCAT 61.455 55.000 0.00 0.00 40.34 2.45
149 150 1.234821 GCCGCCCGATGAAAATCATA 58.765 50.000 0.00 0.00 37.20 2.15
150 151 1.812571 GCCGCCCGATGAAAATCATAT 59.187 47.619 0.00 0.00 37.20 1.78
151 152 3.006940 GCCGCCCGATGAAAATCATATA 58.993 45.455 0.00 0.00 37.20 0.86
152 153 3.627577 GCCGCCCGATGAAAATCATATAT 59.372 43.478 0.00 0.00 37.20 0.86
153 154 4.814234 GCCGCCCGATGAAAATCATATATA 59.186 41.667 0.00 0.00 37.20 0.86
154 155 5.295787 GCCGCCCGATGAAAATCATATATAA 59.704 40.000 0.00 0.00 37.20 0.98
155 156 6.715464 CCGCCCGATGAAAATCATATATAAC 58.285 40.000 0.00 0.00 37.20 1.89
156 157 6.410845 CGCCCGATGAAAATCATATATAACG 58.589 40.000 0.00 0.00 37.20 3.18
157 158 6.509517 CGCCCGATGAAAATCATATATAACGG 60.510 42.308 0.00 0.00 37.20 4.44
158 159 6.315393 GCCCGATGAAAATCATATATAACGGT 59.685 38.462 12.13 0.00 37.20 4.83
159 160 7.148306 GCCCGATGAAAATCATATATAACGGTT 60.148 37.037 12.13 0.00 37.20 4.44
160 161 8.175069 CCCGATGAAAATCATATATAACGGTTG 58.825 37.037 3.07 0.00 37.20 3.77
161 162 7.692291 CCGATGAAAATCATATATAACGGTTGC 59.308 37.037 3.07 0.00 37.20 4.17
162 163 7.422462 CGATGAAAATCATATATAACGGTTGCG 59.578 37.037 3.07 0.00 37.20 4.85
163 164 6.893759 TGAAAATCATATATAACGGTTGCGG 58.106 36.000 3.07 0.00 0.00 5.69
164 165 6.706716 TGAAAATCATATATAACGGTTGCGGA 59.293 34.615 3.07 0.00 0.00 5.54
165 166 6.721571 AAATCATATATAACGGTTGCGGAG 57.278 37.500 3.07 0.00 0.00 4.63
166 167 4.182693 TCATATATAACGGTTGCGGAGG 57.817 45.455 3.07 0.00 0.00 4.30
167 168 3.575256 TCATATATAACGGTTGCGGAGGT 59.425 43.478 3.07 0.00 0.00 3.85
168 169 2.234300 ATATAACGGTTGCGGAGGTG 57.766 50.000 3.07 0.00 0.00 4.00
169 170 0.176219 TATAACGGTTGCGGAGGTGG 59.824 55.000 3.07 0.00 0.00 4.61
170 171 1.833787 ATAACGGTTGCGGAGGTGGT 61.834 55.000 3.07 0.00 0.00 4.16
171 172 2.718747 TAACGGTTGCGGAGGTGGTG 62.719 60.000 3.07 0.00 0.00 4.17
172 173 4.308458 CGGTTGCGGAGGTGGTGA 62.308 66.667 0.00 0.00 0.00 4.02
173 174 2.112297 GGTTGCGGAGGTGGTGAA 59.888 61.111 0.00 0.00 0.00 3.18
174 175 2.258726 GGTTGCGGAGGTGGTGAAC 61.259 63.158 0.00 0.00 0.00 3.18
175 176 2.280524 TTGCGGAGGTGGTGAACG 60.281 61.111 0.00 0.00 0.00 3.95
176 177 3.818121 TTGCGGAGGTGGTGAACGG 62.818 63.158 0.00 0.00 0.00 4.44
180 181 4.980805 GAGGTGGTGAACGGCGCA 62.981 66.667 10.83 0.00 0.00 6.09
181 182 4.555709 AGGTGGTGAACGGCGCAA 62.556 61.111 10.83 0.00 0.00 4.85
182 183 4.025401 GGTGGTGAACGGCGCAAG 62.025 66.667 10.83 4.90 43.44 4.01
183 184 2.970324 GTGGTGAACGGCGCAAGA 60.970 61.111 10.83 0.00 43.02 3.02
184 185 2.203084 TGGTGAACGGCGCAAGAA 60.203 55.556 10.83 0.00 43.02 2.52
185 186 1.820056 TGGTGAACGGCGCAAGAAA 60.820 52.632 10.83 0.00 43.02 2.52
186 187 1.357334 GGTGAACGGCGCAAGAAAA 59.643 52.632 10.83 0.00 43.02 2.29
187 188 0.039527 GGTGAACGGCGCAAGAAAAT 60.040 50.000 10.83 0.00 43.02 1.82
188 189 1.601914 GGTGAACGGCGCAAGAAAATT 60.602 47.619 10.83 0.00 43.02 1.82
189 190 2.350964 GGTGAACGGCGCAAGAAAATTA 60.351 45.455 10.83 0.00 43.02 1.40
190 191 2.908626 GTGAACGGCGCAAGAAAATTAG 59.091 45.455 10.83 0.00 43.02 1.73
191 192 1.911464 GAACGGCGCAAGAAAATTAGC 59.089 47.619 10.83 0.00 43.02 3.09
192 193 0.170339 ACGGCGCAAGAAAATTAGCC 59.830 50.000 10.83 0.00 41.03 3.93
193 194 0.170116 CGGCGCAAGAAAATTAGCCA 59.830 50.000 10.83 0.00 44.34 4.75
194 195 1.795162 CGGCGCAAGAAAATTAGCCAG 60.795 52.381 10.83 0.00 44.34 4.85
195 196 1.202348 GGCGCAAGAAAATTAGCCAGT 59.798 47.619 10.83 0.00 43.65 4.00
196 197 2.519963 GCGCAAGAAAATTAGCCAGTC 58.480 47.619 0.30 0.00 43.02 3.51
197 198 2.095263 GCGCAAGAAAATTAGCCAGTCA 60.095 45.455 0.30 0.00 43.02 3.41
198 199 3.492313 CGCAAGAAAATTAGCCAGTCAC 58.508 45.455 0.00 0.00 43.02 3.67
199 200 3.189287 CGCAAGAAAATTAGCCAGTCACT 59.811 43.478 0.00 0.00 43.02 3.41
200 201 4.320494 CGCAAGAAAATTAGCCAGTCACTT 60.320 41.667 0.00 0.00 43.02 3.16
201 202 5.157067 GCAAGAAAATTAGCCAGTCACTTC 58.843 41.667 0.00 0.00 0.00 3.01
202 203 5.703876 CAAGAAAATTAGCCAGTCACTTCC 58.296 41.667 0.00 0.00 0.00 3.46
203 204 5.248380 AGAAAATTAGCCAGTCACTTCCT 57.752 39.130 0.00 0.00 0.00 3.36
204 205 5.635120 AGAAAATTAGCCAGTCACTTCCTT 58.365 37.500 0.00 0.00 0.00 3.36
205 206 6.071320 AGAAAATTAGCCAGTCACTTCCTTT 58.929 36.000 0.00 0.00 0.00 3.11
206 207 7.231467 AGAAAATTAGCCAGTCACTTCCTTTA 58.769 34.615 0.00 0.00 0.00 1.85
207 208 7.724061 AGAAAATTAGCCAGTCACTTCCTTTAA 59.276 33.333 0.00 0.00 0.00 1.52
208 209 7.833285 AAATTAGCCAGTCACTTCCTTTAAA 57.167 32.000 0.00 0.00 0.00 1.52
209 210 7.833285 AATTAGCCAGTCACTTCCTTTAAAA 57.167 32.000 0.00 0.00 0.00 1.52
210 211 8.422577 AATTAGCCAGTCACTTCCTTTAAAAT 57.577 30.769 0.00 0.00 0.00 1.82
211 212 9.528489 AATTAGCCAGTCACTTCCTTTAAAATA 57.472 29.630 0.00 0.00 0.00 1.40
212 213 8.561738 TTAGCCAGTCACTTCCTTTAAAATAG 57.438 34.615 0.00 0.00 0.00 1.73
213 214 6.543735 AGCCAGTCACTTCCTTTAAAATAGT 58.456 36.000 0.00 0.00 0.00 2.12
214 215 6.655425 AGCCAGTCACTTCCTTTAAAATAGTC 59.345 38.462 0.00 0.00 0.00 2.59
215 216 6.655425 GCCAGTCACTTCCTTTAAAATAGTCT 59.345 38.462 0.00 0.00 0.00 3.24
216 217 7.175119 GCCAGTCACTTCCTTTAAAATAGTCTT 59.825 37.037 0.00 0.00 0.00 3.01
217 218 8.722394 CCAGTCACTTCCTTTAAAATAGTCTTC 58.278 37.037 0.00 0.00 0.00 2.87
218 219 8.722394 CAGTCACTTCCTTTAAAATAGTCTTCC 58.278 37.037 0.00 0.00 0.00 3.46
219 220 7.603024 AGTCACTTCCTTTAAAATAGTCTTCCG 59.397 37.037 0.00 0.00 0.00 4.30
220 221 7.601508 GTCACTTCCTTTAAAATAGTCTTCCGA 59.398 37.037 0.00 0.00 0.00 4.55
221 222 7.817962 TCACTTCCTTTAAAATAGTCTTCCGAG 59.182 37.037 0.00 0.00 0.00 4.63
222 223 7.603024 CACTTCCTTTAAAATAGTCTTCCGAGT 59.397 37.037 0.00 0.00 0.00 4.18
223 224 8.810041 ACTTCCTTTAAAATAGTCTTCCGAGTA 58.190 33.333 0.00 0.00 0.00 2.59
224 225 9.649167 CTTCCTTTAAAATAGTCTTCCGAGTAA 57.351 33.333 0.00 0.00 0.00 2.24
258 259 9.925268 AATAATTCATTTTAATACGACACGTCC 57.075 29.630 0.00 0.00 41.54 4.79
259 260 5.783100 TTCATTTTAATACGACACGTCCC 57.217 39.130 0.00 0.00 41.54 4.46
260 261 4.818642 TCATTTTAATACGACACGTCCCA 58.181 39.130 0.00 0.00 41.54 4.37
261 262 5.421277 TCATTTTAATACGACACGTCCCAT 58.579 37.500 0.00 0.00 41.54 4.00
262 263 5.521010 TCATTTTAATACGACACGTCCCATC 59.479 40.000 0.00 0.00 41.54 3.51
263 264 4.724074 TTTAATACGACACGTCCCATCT 57.276 40.909 0.00 0.00 41.54 2.90
264 265 4.724074 TTAATACGACACGTCCCATCTT 57.276 40.909 0.00 0.00 41.54 2.40
265 266 2.579207 ATACGACACGTCCCATCTTG 57.421 50.000 0.00 0.00 41.54 3.02
266 267 0.108992 TACGACACGTCCCATCTTGC 60.109 55.000 0.00 0.00 41.54 4.01
267 268 2.444624 CGACACGTCCCATCTTGCG 61.445 63.158 0.00 0.00 0.00 4.85
268 269 1.080093 GACACGTCCCATCTTGCGA 60.080 57.895 0.00 0.00 0.00 5.10
269 270 0.460284 GACACGTCCCATCTTGCGAT 60.460 55.000 0.00 0.00 0.00 4.58
270 271 0.460284 ACACGTCCCATCTTGCGATC 60.460 55.000 0.00 0.00 0.00 3.69
271 272 0.460109 CACGTCCCATCTTGCGATCA 60.460 55.000 0.00 0.00 0.00 2.92
272 273 0.249120 ACGTCCCATCTTGCGATCAA 59.751 50.000 0.00 0.00 0.00 2.57
273 274 1.338674 ACGTCCCATCTTGCGATCAAA 60.339 47.619 0.00 0.00 0.00 2.69
274 275 1.062587 CGTCCCATCTTGCGATCAAAC 59.937 52.381 0.00 0.00 0.00 2.93
275 276 2.083774 GTCCCATCTTGCGATCAAACA 58.916 47.619 0.00 0.00 0.00 2.83
276 277 2.487762 GTCCCATCTTGCGATCAAACAA 59.512 45.455 0.00 0.00 0.00 2.83
277 278 3.129287 GTCCCATCTTGCGATCAAACAAT 59.871 43.478 0.00 0.00 0.00 2.71
278 279 3.763360 TCCCATCTTGCGATCAAACAATT 59.237 39.130 0.00 0.00 0.00 2.32
279 280 4.220382 TCCCATCTTGCGATCAAACAATTT 59.780 37.500 0.00 0.00 0.00 1.82
280 281 5.417266 TCCCATCTTGCGATCAAACAATTTA 59.583 36.000 0.00 0.00 0.00 1.40
281 282 5.516339 CCCATCTTGCGATCAAACAATTTAC 59.484 40.000 0.00 0.00 0.00 2.01
282 283 6.092092 CCATCTTGCGATCAAACAATTTACA 58.908 36.000 0.00 0.00 0.00 2.41
283 284 6.033831 CCATCTTGCGATCAAACAATTTACAC 59.966 38.462 0.00 0.00 0.00 2.90
284 285 6.066054 TCTTGCGATCAAACAATTTACACA 57.934 33.333 0.00 0.00 0.00 3.72
285 286 6.676950 TCTTGCGATCAAACAATTTACACAT 58.323 32.000 0.00 0.00 0.00 3.21
286 287 6.581919 TCTTGCGATCAAACAATTTACACATG 59.418 34.615 0.00 0.00 0.00 3.21
287 288 5.159925 TGCGATCAAACAATTTACACATGG 58.840 37.500 0.00 0.00 0.00 3.66
288 289 5.160641 GCGATCAAACAATTTACACATGGT 58.839 37.500 0.00 0.00 0.00 3.55
289 290 6.072452 TGCGATCAAACAATTTACACATGGTA 60.072 34.615 0.00 0.00 0.00 3.25
290 291 6.250527 GCGATCAAACAATTTACACATGGTAC 59.749 38.462 0.00 0.00 0.00 3.34
291 292 6.464519 CGATCAAACAATTTACACATGGTACG 59.535 38.462 0.00 0.00 0.00 3.67
292 293 6.862711 TCAAACAATTTACACATGGTACGA 57.137 33.333 0.00 0.00 0.00 3.43
293 294 7.260558 TCAAACAATTTACACATGGTACGAA 57.739 32.000 0.00 0.00 0.00 3.85
294 295 7.704271 TCAAACAATTTACACATGGTACGAAA 58.296 30.769 0.00 0.00 0.00 3.46
295 296 8.353684 TCAAACAATTTACACATGGTACGAAAT 58.646 29.630 0.00 0.00 0.00 2.17
296 297 8.423973 CAAACAATTTACACATGGTACGAAATG 58.576 33.333 0.00 1.49 0.00 2.32
297 298 7.209471 ACAATTTACACATGGTACGAAATGT 57.791 32.000 0.00 2.57 37.50 2.71
298 299 7.302524 ACAATTTACACATGGTACGAAATGTC 58.697 34.615 0.00 0.00 34.81 3.06
299 300 5.866335 TTTACACATGGTACGAAATGTCC 57.134 39.130 0.00 0.00 34.81 4.02
300 301 2.343101 ACACATGGTACGAAATGTCCG 58.657 47.619 0.00 0.00 34.81 4.79
301 302 2.289195 ACACATGGTACGAAATGTCCGT 60.289 45.455 0.00 0.00 43.26 4.69
302 303 2.347452 CACATGGTACGAAATGTCCGTC 59.653 50.000 0.00 0.00 40.95 4.79
303 304 2.232941 ACATGGTACGAAATGTCCGTCT 59.767 45.455 0.00 0.00 40.95 4.18
304 305 3.259064 CATGGTACGAAATGTCCGTCTT 58.741 45.455 0.00 0.00 40.95 3.01
305 306 4.082081 ACATGGTACGAAATGTCCGTCTTA 60.082 41.667 0.00 0.00 40.95 2.10
306 307 4.517952 TGGTACGAAATGTCCGTCTTAA 57.482 40.909 0.00 0.00 40.95 1.85
307 308 5.075858 TGGTACGAAATGTCCGTCTTAAT 57.924 39.130 0.00 0.00 40.95 1.40
308 309 4.865925 TGGTACGAAATGTCCGTCTTAATG 59.134 41.667 0.00 0.00 40.95 1.90
309 310 4.269363 GGTACGAAATGTCCGTCTTAATGG 59.731 45.833 0.00 0.00 40.95 3.16
310 311 3.934068 ACGAAATGTCCGTCTTAATGGT 58.066 40.909 0.00 0.00 34.97 3.55
311 312 4.320870 ACGAAATGTCCGTCTTAATGGTT 58.679 39.130 0.00 0.00 34.97 3.67
312 313 4.758165 ACGAAATGTCCGTCTTAATGGTTT 59.242 37.500 0.00 0.00 34.97 3.27
313 314 5.086058 CGAAATGTCCGTCTTAATGGTTTG 58.914 41.667 0.00 0.00 32.88 2.93
314 315 5.106869 CGAAATGTCCGTCTTAATGGTTTGA 60.107 40.000 0.00 0.00 32.88 2.69
315 316 6.403200 CGAAATGTCCGTCTTAATGGTTTGAT 60.403 38.462 0.00 0.00 32.88 2.57
316 317 7.201574 CGAAATGTCCGTCTTAATGGTTTGATA 60.202 37.037 0.00 0.00 32.88 2.15
317 318 6.920569 ATGTCCGTCTTAATGGTTTGATAC 57.079 37.500 0.00 0.00 32.88 2.24
318 319 5.795972 TGTCCGTCTTAATGGTTTGATACA 58.204 37.500 0.00 0.00 32.88 2.29
319 320 6.231951 TGTCCGTCTTAATGGTTTGATACAA 58.768 36.000 0.00 0.00 32.88 2.41
320 321 6.711194 TGTCCGTCTTAATGGTTTGATACAAA 59.289 34.615 0.00 0.00 32.88 2.83
321 322 7.019418 GTCCGTCTTAATGGTTTGATACAAAC 58.981 38.462 15.97 15.97 32.88 2.93
322 323 6.938030 TCCGTCTTAATGGTTTGATACAAACT 59.062 34.615 21.08 9.10 32.88 2.66
323 324 7.446013 TCCGTCTTAATGGTTTGATACAAACTT 59.554 33.333 21.08 13.73 32.88 2.66
324 325 8.079809 CCGTCTTAATGGTTTGATACAAACTTT 58.920 33.333 21.08 17.47 0.00 2.66
325 326 8.901748 CGTCTTAATGGTTTGATACAAACTTTG 58.098 33.333 21.08 0.00 0.00 2.77
326 327 8.699749 GTCTTAATGGTTTGATACAAACTTTGC 58.300 33.333 21.08 9.59 0.00 3.68
327 328 8.417106 TCTTAATGGTTTGATACAAACTTTGCA 58.583 29.630 21.08 13.61 0.00 4.08
328 329 8.948631 TTAATGGTTTGATACAAACTTTGCAA 57.051 26.923 21.08 0.00 0.00 4.08
329 330 7.481275 AATGGTTTGATACAAACTTTGCAAG 57.519 32.000 21.08 0.00 0.00 4.01
330 331 6.214191 TGGTTTGATACAAACTTTGCAAGA 57.786 33.333 21.08 0.00 0.00 3.02
331 332 6.272318 TGGTTTGATACAAACTTTGCAAGAG 58.728 36.000 21.08 3.23 0.00 2.85
332 333 5.691754 GGTTTGATACAAACTTTGCAAGAGG 59.308 40.000 21.08 0.00 0.00 3.69
333 334 6.273071 GTTTGATACAAACTTTGCAAGAGGT 58.727 36.000 16.69 0.00 0.00 3.85
334 335 7.422399 GTTTGATACAAACTTTGCAAGAGGTA 58.578 34.615 16.69 0.43 0.00 3.08
335 336 6.554334 TGATACAAACTTTGCAAGAGGTAC 57.446 37.500 0.00 0.00 0.00 3.34
336 337 6.058833 TGATACAAACTTTGCAAGAGGTACA 58.941 36.000 0.00 0.00 0.00 2.90
337 338 4.900635 ACAAACTTTGCAAGAGGTACAG 57.099 40.909 0.00 0.00 0.00 2.74
338 339 3.066760 ACAAACTTTGCAAGAGGTACAGC 59.933 43.478 0.00 0.00 0.00 4.40
339 340 2.938956 ACTTTGCAAGAGGTACAGCT 57.061 45.000 0.00 0.00 0.00 4.24
340 341 4.351874 AACTTTGCAAGAGGTACAGCTA 57.648 40.909 0.00 0.00 0.00 3.32
361 362 3.767230 CTCTGCCAACGCGTCGTG 61.767 66.667 14.44 8.34 39.99 4.35
413 414 1.522668 TGGACAAGGCAAACGATGAG 58.477 50.000 0.00 0.00 0.00 2.90
416 417 2.143122 GACAAGGCAAACGATGAGTGA 58.857 47.619 0.00 0.00 0.00 3.41
429 430 0.534427 TGAGTGACGACGGTCTCTGT 60.534 55.000 6.57 0.00 44.61 3.41
435 436 1.741706 GACGACGGTCTCTGTCCATTA 59.258 52.381 6.57 0.00 40.15 1.90
483 484 2.478709 CGTAGCAGCTTCTCTGATCGTT 60.479 50.000 0.00 0.00 45.72 3.85
510 511 2.510906 GCCCATCTGCCCGTACAT 59.489 61.111 0.00 0.00 0.00 2.29
521 522 4.540735 CGTACATGGGCCGGGTCC 62.541 72.222 11.77 11.77 0.00 4.46
584 590 1.427819 CCGAACGCAATTGGCTACC 59.572 57.895 7.72 0.00 41.67 3.18
624 644 3.365291 GATCCACACGTAGGCGGCA 62.365 63.158 13.08 0.00 43.45 5.69
652 672 1.375326 GTGGAACCACCTCCCTCAC 59.625 63.158 12.42 0.00 40.79 3.51
766 786 6.764560 GCGGTAGTAAAATCTTTCCATCCTAA 59.235 38.462 0.00 0.00 0.00 2.69
767 787 7.281549 GCGGTAGTAAAATCTTTCCATCCTAAA 59.718 37.037 0.00 0.00 0.00 1.85
768 788 8.827677 CGGTAGTAAAATCTTTCCATCCTAAAG 58.172 37.037 0.00 0.00 35.66 1.85
769 789 9.682465 GGTAGTAAAATCTTTCCATCCTAAAGT 57.318 33.333 0.00 0.00 35.79 2.66
779 840 9.096823 TCTTTCCATCCTAAAGTTTAGTACTCA 57.903 33.333 18.98 0.00 35.54 3.41
795 856 9.986157 TTTAGTACTCAGGGAAGACTAGAATAA 57.014 33.333 0.00 0.00 0.00 1.40
919 1001 4.062293 TCACACACACACATAACTAAGGC 58.938 43.478 0.00 0.00 0.00 4.35
926 1008 1.485066 CACATAACTAAGGCCCTCGGT 59.515 52.381 0.00 0.00 0.00 4.69
1026 1109 4.373116 GGCGGCGTGTCCTTCTCA 62.373 66.667 9.37 0.00 0.00 3.27
1311 1394 6.519679 TCGTAACCTTCCACGCATATATAT 57.480 37.500 0.00 0.00 38.05 0.86
1312 1395 6.927416 TCGTAACCTTCCACGCATATATATT 58.073 36.000 0.00 0.00 38.05 1.28
1313 1396 8.054152 TCGTAACCTTCCACGCATATATATTA 57.946 34.615 0.00 0.00 38.05 0.98
1314 1397 8.689061 TCGTAACCTTCCACGCATATATATTAT 58.311 33.333 0.00 0.00 38.05 1.28
1341 1424 2.416431 GCTTGTCATTTGCAGTCCATCC 60.416 50.000 0.00 0.00 0.00 3.51
1342 1425 1.838112 TGTCATTTGCAGTCCATCCC 58.162 50.000 0.00 0.00 0.00 3.85
1496 1582 9.640952 TTAGATTTGCCAATAGCTATAGGTTTT 57.359 29.630 10.19 5.78 44.23 2.43
1625 1740 7.389803 TGGTTACTTGTTCATAATGTCCATG 57.610 36.000 0.00 0.00 0.00 3.66
1643 1758 3.311322 CCATGGTTCATCAAATGCATTGC 59.689 43.478 13.82 0.46 38.98 3.56
1681 1796 3.100545 CCAAATGCTGGCTATCGGT 57.899 52.632 0.00 0.00 38.76 4.69
1717 1832 2.698855 TTTAGACAGGAGGCATCTGC 57.301 50.000 0.00 0.00 41.14 4.26
1727 1842 2.124320 GCATCTGCCCGGCCTTAA 60.124 61.111 7.03 0.00 34.31 1.85
1728 1843 1.752694 GCATCTGCCCGGCCTTAAA 60.753 57.895 7.03 0.00 34.31 1.52
1729 1844 2.004808 GCATCTGCCCGGCCTTAAAC 62.005 60.000 7.03 0.00 34.31 2.01
1730 1845 0.394352 CATCTGCCCGGCCTTAAACT 60.394 55.000 7.03 0.00 0.00 2.66
1731 1846 0.394352 ATCTGCCCGGCCTTAAACTG 60.394 55.000 7.03 0.00 0.00 3.16
1732 1847 1.002624 CTGCCCGGCCTTAAACTGA 60.003 57.895 7.03 0.00 0.00 3.41
1733 1848 1.002624 TGCCCGGCCTTAAACTGAG 60.003 57.895 7.03 0.00 0.00 3.35
1734 1849 1.298667 GCCCGGCCTTAAACTGAGA 59.701 57.895 0.00 0.00 0.00 3.27
1735 1850 0.107165 GCCCGGCCTTAAACTGAGAT 60.107 55.000 0.00 0.00 0.00 2.75
1736 1851 1.954927 CCCGGCCTTAAACTGAGATC 58.045 55.000 0.00 0.00 0.00 2.75
1737 1852 1.486726 CCCGGCCTTAAACTGAGATCT 59.513 52.381 0.00 0.00 0.00 2.75
1738 1853 2.092914 CCCGGCCTTAAACTGAGATCTT 60.093 50.000 0.00 0.00 0.00 2.40
1739 1854 3.610911 CCGGCCTTAAACTGAGATCTTT 58.389 45.455 0.00 0.00 0.00 2.52
1740 1855 4.010349 CCGGCCTTAAACTGAGATCTTTT 58.990 43.478 0.00 0.00 0.00 2.27
1741 1856 4.459337 CCGGCCTTAAACTGAGATCTTTTT 59.541 41.667 0.00 0.01 0.00 1.94
1813 1928 3.695606 GAGCGGACCTCACCAGCA 61.696 66.667 0.00 0.00 40.45 4.41
1941 2056 2.299297 ACTTTCGGACTGACCAAGTAGG 59.701 50.000 0.32 0.00 40.07 3.18
2079 2194 2.238395 GTGAGCTTCCTGAAGAATCCCT 59.762 50.000 11.00 0.00 40.79 4.20
2139 2254 4.660168 AGAGTTGTCTGGCATGAAAATCT 58.340 39.130 0.00 0.00 0.00 2.40
2252 2371 7.841956 AGATAAACACTAGTCATAACTGTGCT 58.158 34.615 0.00 0.00 37.72 4.40
2464 2583 2.373540 TTGTGCTCGTGGTACATACC 57.626 50.000 0.75 0.75 44.52 2.73
2522 2650 7.381678 GCTGATTTAGTATAAGTTGTAGACCCG 59.618 40.741 0.00 0.00 0.00 5.28
2588 2716 4.142403 GCACTGAAAATAGTGGCAATGCTA 60.142 41.667 4.82 0.00 46.32 3.49
2609 2737 1.380302 GCAGGGAGGTGTGGTGATT 59.620 57.895 0.00 0.00 0.00 2.57
2758 2886 1.131126 CACAGGGTGGTACGTACGTAG 59.869 57.143 27.48 16.18 0.00 3.51
2760 2888 2.027561 ACAGGGTGGTACGTACGTAGTA 60.028 50.000 27.48 16.53 45.11 1.82
2774 2905 0.870307 GTAGTACGTCGGCCATGCAG 60.870 60.000 2.24 0.00 0.00 4.41
2831 2962 4.869215 TGCATTTGGTACACTGACATTTG 58.131 39.130 0.00 0.00 39.29 2.32
3011 3142 0.807496 GAGGCCATTCTTGCAGTGAC 59.193 55.000 5.01 0.00 0.00 3.67
3026 3157 1.676006 AGTGACGAGTTGGGCAAAAAG 59.324 47.619 0.00 0.00 0.00 2.27
3060 3191 1.835494 TCCACTACTTGCTAGACGCT 58.165 50.000 1.04 0.00 40.11 5.07
3097 3228 7.834681 ACACTGATCCTATCTACTGTTTGACTA 59.165 37.037 0.00 0.00 0.00 2.59
3149 3280 9.810545 TTTGGAAAACTCAAGTTATTTTACAGG 57.189 29.630 0.00 0.00 37.43 4.00
3163 3294 2.111999 TACAGGCCGCTGAGCAAAGT 62.112 55.000 4.88 0.00 0.00 2.66
3166 3297 3.435186 GCCGCTGAGCAAAGTCCC 61.435 66.667 4.88 0.00 0.00 4.46
3245 3376 5.009110 GCCTTGCTTTGAATATTACTCCCTC 59.991 44.000 0.00 0.00 0.00 4.30
3247 3378 4.703897 TGCTTTGAATATTACTCCCTCCG 58.296 43.478 0.00 0.00 0.00 4.63
3249 3380 5.123936 GCTTTGAATATTACTCCCTCCGTT 58.876 41.667 0.00 0.00 0.00 4.44
3250 3381 5.589050 GCTTTGAATATTACTCCCTCCGTTT 59.411 40.000 0.00 0.00 0.00 3.60
3251 3382 6.238402 GCTTTGAATATTACTCCCTCCGTTTC 60.238 42.308 0.00 0.00 0.00 2.78
3252 3383 6.555463 TTGAATATTACTCCCTCCGTTTCT 57.445 37.500 0.00 0.00 0.00 2.52
3255 3386 8.081517 TGAATATTACTCCCTCCGTTTCTAAA 57.918 34.615 0.00 0.00 0.00 1.85
3256 3387 7.983484 TGAATATTACTCCCTCCGTTTCTAAAC 59.017 37.037 0.00 0.00 35.59 2.01
3257 3388 5.750352 ATTACTCCCTCCGTTTCTAAACA 57.250 39.130 6.41 0.00 38.81 2.83
3258 3389 5.750352 TTACTCCCTCCGTTTCTAAACAT 57.250 39.130 6.41 0.00 38.81 2.71
3259 3390 6.855763 TTACTCCCTCCGTTTCTAAACATA 57.144 37.500 6.41 0.00 38.81 2.29
3260 3391 5.952347 ACTCCCTCCGTTTCTAAACATAT 57.048 39.130 6.41 0.00 38.81 1.78
3261 3392 6.309389 ACTCCCTCCGTTTCTAAACATATT 57.691 37.500 6.41 0.00 38.81 1.28
3262 3393 6.718294 ACTCCCTCCGTTTCTAAACATATTT 58.282 36.000 6.41 0.00 38.81 1.40
3263 3394 6.822170 ACTCCCTCCGTTTCTAAACATATTTC 59.178 38.462 6.41 0.00 38.81 2.17
3264 3395 6.954232 TCCCTCCGTTTCTAAACATATTTCT 58.046 36.000 6.41 0.00 38.81 2.52
3265 3396 7.399634 TCCCTCCGTTTCTAAACATATTTCTT 58.600 34.615 6.41 0.00 38.81 2.52
3266 3397 7.886446 TCCCTCCGTTTCTAAACATATTTCTTT 59.114 33.333 6.41 0.00 38.81 2.52
3267 3398 8.520351 CCCTCCGTTTCTAAACATATTTCTTTT 58.480 33.333 6.41 0.00 38.81 2.27
3268 3399 9.908152 CCTCCGTTTCTAAACATATTTCTTTTT 57.092 29.630 6.41 0.00 38.81 1.94
3309 3440 9.656040 AAATTACATGCTAAGCAAAATGAATGA 57.344 25.926 0.00 0.00 43.62 2.57
3310 3441 9.656040 AATTACATGCTAAGCAAAATGAATGAA 57.344 25.926 0.00 0.00 43.62 2.57
3311 3442 9.826574 ATTACATGCTAAGCAAAATGAATGAAT 57.173 25.926 0.00 0.00 43.62 2.57
3312 3443 7.766219 ACATGCTAAGCAAAATGAATGAATC 57.234 32.000 0.00 0.00 43.62 2.52
3313 3444 7.553334 ACATGCTAAGCAAAATGAATGAATCT 58.447 30.769 0.00 0.00 43.62 2.40
3314 3445 8.689061 ACATGCTAAGCAAAATGAATGAATCTA 58.311 29.630 0.00 0.00 43.62 1.98
3315 3446 9.692749 CATGCTAAGCAAAATGAATGAATCTAT 57.307 29.630 0.00 0.00 43.62 1.98
3340 3471 9.871238 ATACTCTAAAATTCTTAGAACGCTCAA 57.129 29.630 0.00 0.00 31.36 3.02
3341 3472 8.245701 ACTCTAAAATTCTTAGAACGCTCAAG 57.754 34.615 0.00 0.00 31.36 3.02
3342 3473 7.061752 TCTAAAATTCTTAGAACGCTCAAGC 57.938 36.000 0.00 0.00 37.78 4.01
3343 3474 5.948992 AAAATTCTTAGAACGCTCAAGCT 57.051 34.783 0.00 0.00 39.32 3.74
3344 3475 5.948992 AAATTCTTAGAACGCTCAAGCTT 57.051 34.783 0.00 0.00 39.32 3.74
3345 3476 5.948992 AATTCTTAGAACGCTCAAGCTTT 57.051 34.783 0.00 0.00 39.32 3.51
3346 3477 4.992381 TTCTTAGAACGCTCAAGCTTTC 57.008 40.909 11.98 11.98 45.93 2.62
3399 3530 1.921243 GTTGTGCAACCTCAACCAAC 58.079 50.000 6.64 2.34 38.74 3.77
3592 3727 2.029288 CATCCGACGTTGCAGTGCT 61.029 57.895 17.60 0.00 0.00 4.40
3670 3805 7.070322 AGGAGACTTACTTTGTACAGTTACCAA 59.930 37.037 0.00 0.00 37.44 3.67
3774 3915 0.972471 TCGAGAGCCAGATTGCCAGA 60.972 55.000 0.00 0.00 0.00 3.86
3830 3971 0.179009 ATTCAGCATGGGTCCGATGG 60.179 55.000 14.99 0.52 36.16 3.51
3831 3972 1.271127 TTCAGCATGGGTCCGATGGA 61.271 55.000 14.99 2.83 36.16 3.41
3832 3973 1.224315 CAGCATGGGTCCGATGGAA 59.776 57.895 14.99 0.00 31.38 3.53
3833 3974 0.179009 CAGCATGGGTCCGATGGAAT 60.179 55.000 14.99 0.00 31.38 3.01
3834 3975 0.179009 AGCATGGGTCCGATGGAATG 60.179 55.000 14.99 0.00 31.38 2.67
3917 4058 0.186630 TGCCATCAGCTAATGCCCAT 59.813 50.000 0.00 0.00 44.23 4.00
3967 4108 4.382685 GGAGGTTCCACATAAGATCGAACA 60.383 45.833 8.86 0.00 36.28 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 3.307480 CGAGAACAGGGGGTTTTAGTGAT 60.307 47.826 0.00 0.00 40.63 3.06
6 7 1.350019 CCGAGAACAGGGGGTTTTAGT 59.650 52.381 0.00 0.00 40.63 2.24
7 8 1.350019 ACCGAGAACAGGGGGTTTTAG 59.650 52.381 0.00 0.00 40.63 1.85
8 9 1.437397 ACCGAGAACAGGGGGTTTTA 58.563 50.000 0.00 0.00 40.63 1.52
9 10 0.554305 AACCGAGAACAGGGGGTTTT 59.446 50.000 0.00 0.00 39.66 2.43
10 11 0.109913 GAACCGAGAACAGGGGGTTT 59.890 55.000 0.00 0.00 42.54 3.27
11 12 1.759236 GAACCGAGAACAGGGGGTT 59.241 57.895 0.00 0.00 45.02 4.11
12 13 2.580601 CGAACCGAGAACAGGGGGT 61.581 63.158 0.00 0.00 0.00 4.95
13 14 2.264794 CGAACCGAGAACAGGGGG 59.735 66.667 0.00 0.00 0.00 5.40
14 15 1.252904 TACCGAACCGAGAACAGGGG 61.253 60.000 0.00 0.00 0.00 4.79
15 16 0.822164 ATACCGAACCGAGAACAGGG 59.178 55.000 0.00 0.00 0.00 4.45
16 17 2.268298 CAATACCGAACCGAGAACAGG 58.732 52.381 0.00 0.00 0.00 4.00
17 18 1.659098 GCAATACCGAACCGAGAACAG 59.341 52.381 0.00 0.00 0.00 3.16
18 19 1.717194 GCAATACCGAACCGAGAACA 58.283 50.000 0.00 0.00 0.00 3.18
19 20 0.643820 CGCAATACCGAACCGAGAAC 59.356 55.000 0.00 0.00 0.00 3.01
20 21 1.079875 GCGCAATACCGAACCGAGAA 61.080 55.000 0.30 0.00 0.00 2.87
21 22 1.517694 GCGCAATACCGAACCGAGA 60.518 57.895 0.30 0.00 0.00 4.04
22 23 1.082117 AAGCGCAATACCGAACCGAG 61.082 55.000 11.47 0.00 0.00 4.63
23 24 1.079681 AAGCGCAATACCGAACCGA 60.080 52.632 11.47 0.00 0.00 4.69
24 25 1.060308 CAAGCGCAATACCGAACCG 59.940 57.895 11.47 0.00 0.00 4.44
25 26 0.096454 GTCAAGCGCAATACCGAACC 59.904 55.000 11.47 0.00 0.00 3.62
26 27 0.096454 GGTCAAGCGCAATACCGAAC 59.904 55.000 11.47 0.00 0.00 3.95
27 28 0.320858 TGGTCAAGCGCAATACCGAA 60.321 50.000 11.47 0.00 34.60 4.30
28 29 1.017177 GTGGTCAAGCGCAATACCGA 61.017 55.000 11.47 1.94 34.60 4.69
29 30 1.423845 GTGGTCAAGCGCAATACCG 59.576 57.895 11.47 0.00 34.60 4.02
30 31 1.423845 CGTGGTCAAGCGCAATACC 59.576 57.895 11.47 14.16 0.00 2.73
31 32 1.296056 ACCGTGGTCAAGCGCAATAC 61.296 55.000 11.47 3.51 0.00 1.89
32 33 1.004320 ACCGTGGTCAAGCGCAATA 60.004 52.632 11.47 0.00 0.00 1.90
33 34 2.281484 ACCGTGGTCAAGCGCAAT 60.281 55.556 11.47 0.00 0.00 3.56
34 35 3.276091 CACCGTGGTCAAGCGCAA 61.276 61.111 11.47 0.00 0.00 4.85
38 39 3.660111 GTGGCACCGTGGTCAAGC 61.660 66.667 6.29 0.00 0.00 4.01
39 40 2.978010 GGTGGCACCGTGGTCAAG 60.978 66.667 22.83 0.00 0.00 3.02
65 66 2.588439 GGAGGTAAGGGCGGTTCC 59.412 66.667 0.00 0.00 0.00 3.62
66 67 2.588439 GGGAGGTAAGGGCGGTTC 59.412 66.667 0.00 0.00 0.00 3.62
67 68 3.013327 GGGGAGGTAAGGGCGGTT 61.013 66.667 0.00 0.00 0.00 4.44
68 69 4.020878 AGGGGAGGTAAGGGCGGT 62.021 66.667 0.00 0.00 0.00 5.68
69 70 3.480133 CAGGGGAGGTAAGGGCGG 61.480 72.222 0.00 0.00 0.00 6.13
70 71 3.480133 CCAGGGGAGGTAAGGGCG 61.480 72.222 0.00 0.00 0.00 6.13
71 72 2.286197 ACCAGGGGAGGTAAGGGC 60.286 66.667 0.00 0.00 40.98 5.19
72 73 0.983378 CAGACCAGGGGAGGTAAGGG 60.983 65.000 0.00 0.00 43.38 3.95
73 74 0.252742 ACAGACCAGGGGAGGTAAGG 60.253 60.000 0.00 0.00 43.38 2.69
74 75 1.196012 GACAGACCAGGGGAGGTAAG 58.804 60.000 0.00 0.00 43.38 2.34
75 76 0.790993 AGACAGACCAGGGGAGGTAA 59.209 55.000 0.00 0.00 43.38 2.85
76 77 0.041238 CAGACAGACCAGGGGAGGTA 59.959 60.000 0.00 0.00 43.38 3.08
77 78 1.229336 CAGACAGACCAGGGGAGGT 60.229 63.158 0.00 0.00 46.82 3.85
78 79 1.992277 CCAGACAGACCAGGGGAGG 60.992 68.421 0.00 0.00 0.00 4.30
79 80 1.229336 ACCAGACAGACCAGGGGAG 60.229 63.158 0.00 0.00 0.00 4.30
80 81 1.229209 GACCAGACAGACCAGGGGA 60.229 63.158 0.00 0.00 0.00 4.81
81 82 2.650116 CGACCAGACAGACCAGGGG 61.650 68.421 0.00 0.00 0.00 4.79
82 83 2.973899 CGACCAGACAGACCAGGG 59.026 66.667 0.00 0.00 0.00 4.45
83 84 2.219325 GAGCGACCAGACAGACCAGG 62.219 65.000 0.00 0.00 0.00 4.45
84 85 1.214062 GAGCGACCAGACAGACCAG 59.786 63.158 0.00 0.00 0.00 4.00
85 86 0.827925 AAGAGCGACCAGACAGACCA 60.828 55.000 0.00 0.00 0.00 4.02
86 87 0.389166 CAAGAGCGACCAGACAGACC 60.389 60.000 0.00 0.00 0.00 3.85
87 88 0.598562 TCAAGAGCGACCAGACAGAC 59.401 55.000 0.00 0.00 0.00 3.51
88 89 1.270826 CTTCAAGAGCGACCAGACAGA 59.729 52.381 0.00 0.00 0.00 3.41
89 90 1.000283 ACTTCAAGAGCGACCAGACAG 60.000 52.381 0.00 0.00 0.00 3.51
90 91 1.040646 ACTTCAAGAGCGACCAGACA 58.959 50.000 0.00 0.00 0.00 3.41
91 92 2.062519 GAACTTCAAGAGCGACCAGAC 58.937 52.381 0.00 0.00 0.00 3.51
92 93 1.964223 AGAACTTCAAGAGCGACCAGA 59.036 47.619 0.00 0.00 0.00 3.86
93 94 2.447244 AGAACTTCAAGAGCGACCAG 57.553 50.000 0.00 0.00 0.00 4.00
94 95 3.368427 CCATAGAACTTCAAGAGCGACCA 60.368 47.826 0.00 0.00 0.00 4.02
95 96 3.190874 CCATAGAACTTCAAGAGCGACC 58.809 50.000 0.00 0.00 0.00 4.79
96 97 3.614616 CACCATAGAACTTCAAGAGCGAC 59.385 47.826 0.00 0.00 0.00 5.19
97 98 3.368427 CCACCATAGAACTTCAAGAGCGA 60.368 47.826 0.00 0.00 0.00 4.93
98 99 2.932614 CCACCATAGAACTTCAAGAGCG 59.067 50.000 0.00 0.00 0.00 5.03
99 100 3.274288 CCCACCATAGAACTTCAAGAGC 58.726 50.000 0.00 0.00 0.00 4.09
100 101 4.508662 GACCCACCATAGAACTTCAAGAG 58.491 47.826 0.00 0.00 0.00 2.85
101 102 3.056107 CGACCCACCATAGAACTTCAAGA 60.056 47.826 0.00 0.00 0.00 3.02
102 103 3.262420 CGACCCACCATAGAACTTCAAG 58.738 50.000 0.00 0.00 0.00 3.02
103 104 2.614481 GCGACCCACCATAGAACTTCAA 60.614 50.000 0.00 0.00 0.00 2.69
104 105 1.066430 GCGACCCACCATAGAACTTCA 60.066 52.381 0.00 0.00 0.00 3.02
105 106 1.653151 GCGACCCACCATAGAACTTC 58.347 55.000 0.00 0.00 0.00 3.01
106 107 0.108329 CGCGACCCACCATAGAACTT 60.108 55.000 0.00 0.00 0.00 2.66
107 108 1.515954 CGCGACCCACCATAGAACT 59.484 57.895 0.00 0.00 0.00 3.01
108 109 1.520787 CCGCGACCCACCATAGAAC 60.521 63.158 8.23 0.00 0.00 3.01
109 110 1.985662 ACCGCGACCCACCATAGAA 60.986 57.895 8.23 0.00 0.00 2.10
110 111 2.363276 ACCGCGACCCACCATAGA 60.363 61.111 8.23 0.00 0.00 1.98
111 112 2.202878 CACCGCGACCCACCATAG 60.203 66.667 8.23 0.00 0.00 2.23
112 113 3.776781 CCACCGCGACCCACCATA 61.777 66.667 8.23 0.00 0.00 2.74
127 128 3.653664 ATTTTCATCGGGCGGCCCA 62.654 57.895 35.63 23.29 45.83 5.36
128 129 2.833121 ATTTTCATCGGGCGGCCC 60.833 61.111 28.61 28.61 41.09 5.80
129 130 1.455383 ATGATTTTCATCGGGCGGCC 61.455 55.000 20.04 20.04 29.59 6.13
130 131 1.234821 TATGATTTTCATCGGGCGGC 58.765 50.000 0.00 0.00 38.26 6.53
131 132 6.509517 CGTTATATATGATTTTCATCGGGCGG 60.510 42.308 0.00 0.00 38.26 6.13
132 133 6.410845 CGTTATATATGATTTTCATCGGGCG 58.589 40.000 0.00 0.00 38.26 6.13
133 134 6.315393 ACCGTTATATATGATTTTCATCGGGC 59.685 38.462 13.92 0.00 39.55 6.13
134 135 7.843490 ACCGTTATATATGATTTTCATCGGG 57.157 36.000 13.92 2.88 39.55 5.14
135 136 7.692291 GCAACCGTTATATATGATTTTCATCGG 59.308 37.037 9.95 9.95 40.44 4.18
136 137 7.422462 CGCAACCGTTATATATGATTTTCATCG 59.578 37.037 0.00 0.00 38.26 3.84
137 138 7.692291 CCGCAACCGTTATATATGATTTTCATC 59.308 37.037 0.00 0.00 38.26 2.92
138 139 7.389330 TCCGCAACCGTTATATATGATTTTCAT 59.611 33.333 0.00 0.00 40.72 2.57
139 140 6.706716 TCCGCAACCGTTATATATGATTTTCA 59.293 34.615 0.00 0.00 0.00 2.69
140 141 7.124347 TCCGCAACCGTTATATATGATTTTC 57.876 36.000 0.00 0.00 0.00 2.29
141 142 6.148811 CCTCCGCAACCGTTATATATGATTTT 59.851 38.462 0.00 0.00 0.00 1.82
142 143 5.642063 CCTCCGCAACCGTTATATATGATTT 59.358 40.000 0.00 0.00 0.00 2.17
143 144 5.175859 CCTCCGCAACCGTTATATATGATT 58.824 41.667 0.00 0.00 0.00 2.57
144 145 4.222145 ACCTCCGCAACCGTTATATATGAT 59.778 41.667 0.00 0.00 0.00 2.45
145 146 3.575256 ACCTCCGCAACCGTTATATATGA 59.425 43.478 0.00 0.00 0.00 2.15
146 147 3.678072 CACCTCCGCAACCGTTATATATG 59.322 47.826 0.00 0.00 0.00 1.78
147 148 3.306502 CCACCTCCGCAACCGTTATATAT 60.307 47.826 0.00 0.00 0.00 0.86
148 149 2.036217 CCACCTCCGCAACCGTTATATA 59.964 50.000 0.00 0.00 0.00 0.86
149 150 1.202604 CCACCTCCGCAACCGTTATAT 60.203 52.381 0.00 0.00 0.00 0.86
150 151 0.176219 CCACCTCCGCAACCGTTATA 59.824 55.000 0.00 0.00 0.00 0.98
151 152 1.078708 CCACCTCCGCAACCGTTAT 60.079 57.895 0.00 0.00 0.00 1.89
152 153 2.344500 CCACCTCCGCAACCGTTA 59.656 61.111 0.00 0.00 0.00 3.18
153 154 3.868985 ACCACCTCCGCAACCGTT 61.869 61.111 0.00 0.00 0.00 4.44
154 155 4.619227 CACCACCTCCGCAACCGT 62.619 66.667 0.00 0.00 0.00 4.83
155 156 3.818121 TTCACCACCTCCGCAACCG 62.818 63.158 0.00 0.00 0.00 4.44
156 157 2.112297 TTCACCACCTCCGCAACC 59.888 61.111 0.00 0.00 0.00 3.77
157 158 2.604174 CGTTCACCACCTCCGCAAC 61.604 63.158 0.00 0.00 0.00 4.17
158 159 2.280524 CGTTCACCACCTCCGCAA 60.281 61.111 0.00 0.00 0.00 4.85
159 160 4.308458 CCGTTCACCACCTCCGCA 62.308 66.667 0.00 0.00 0.00 5.69
163 164 4.980805 TGCGCCGTTCACCACCTC 62.981 66.667 4.18 0.00 0.00 3.85
164 165 4.555709 TTGCGCCGTTCACCACCT 62.556 61.111 4.18 0.00 0.00 4.00
165 166 4.025401 CTTGCGCCGTTCACCACC 62.025 66.667 4.18 0.00 0.00 4.61
166 167 2.054140 TTTCTTGCGCCGTTCACCAC 62.054 55.000 4.18 0.00 0.00 4.16
167 168 1.377366 TTTTCTTGCGCCGTTCACCA 61.377 50.000 4.18 0.00 0.00 4.17
168 169 0.039527 ATTTTCTTGCGCCGTTCACC 60.040 50.000 4.18 0.00 0.00 4.02
169 170 1.766069 AATTTTCTTGCGCCGTTCAC 58.234 45.000 4.18 0.00 0.00 3.18
170 171 2.667171 GCTAATTTTCTTGCGCCGTTCA 60.667 45.455 4.18 0.00 0.00 3.18
171 172 1.911464 GCTAATTTTCTTGCGCCGTTC 59.089 47.619 4.18 0.00 0.00 3.95
172 173 1.402325 GGCTAATTTTCTTGCGCCGTT 60.402 47.619 4.18 0.00 0.00 4.44
173 174 0.170339 GGCTAATTTTCTTGCGCCGT 59.830 50.000 4.18 0.00 0.00 5.68
174 175 0.170116 TGGCTAATTTTCTTGCGCCG 59.830 50.000 4.18 0.00 40.31 6.46
175 176 1.202348 ACTGGCTAATTTTCTTGCGCC 59.798 47.619 4.18 0.00 38.01 6.53
176 177 2.095263 TGACTGGCTAATTTTCTTGCGC 60.095 45.455 0.00 0.00 0.00 6.09
177 178 3.189287 AGTGACTGGCTAATTTTCTTGCG 59.811 43.478 0.00 0.00 0.00 4.85
178 179 4.773323 AGTGACTGGCTAATTTTCTTGC 57.227 40.909 0.00 0.00 0.00 4.01
179 180 5.474876 AGGAAGTGACTGGCTAATTTTCTTG 59.525 40.000 0.00 0.00 0.00 3.02
180 181 5.635120 AGGAAGTGACTGGCTAATTTTCTT 58.365 37.500 0.00 0.00 0.00 2.52
181 182 5.248380 AGGAAGTGACTGGCTAATTTTCT 57.752 39.130 0.00 0.00 0.00 2.52
182 183 5.966742 AAGGAAGTGACTGGCTAATTTTC 57.033 39.130 0.00 0.00 0.00 2.29
183 184 7.833285 TTAAAGGAAGTGACTGGCTAATTTT 57.167 32.000 0.00 0.00 0.00 1.82
184 185 7.833285 TTTAAAGGAAGTGACTGGCTAATTT 57.167 32.000 0.00 0.00 0.00 1.82
185 186 7.833285 TTTTAAAGGAAGTGACTGGCTAATT 57.167 32.000 0.00 0.00 0.00 1.40
186 187 9.178758 CTATTTTAAAGGAAGTGACTGGCTAAT 57.821 33.333 0.00 0.00 0.00 1.73
187 188 8.161425 ACTATTTTAAAGGAAGTGACTGGCTAA 58.839 33.333 0.00 0.00 0.00 3.09
188 189 7.686434 ACTATTTTAAAGGAAGTGACTGGCTA 58.314 34.615 0.00 0.00 0.00 3.93
189 190 6.543735 ACTATTTTAAAGGAAGTGACTGGCT 58.456 36.000 0.00 0.00 0.00 4.75
190 191 6.655425 AGACTATTTTAAAGGAAGTGACTGGC 59.345 38.462 4.48 0.00 0.00 4.85
191 192 8.622948 AAGACTATTTTAAAGGAAGTGACTGG 57.377 34.615 4.48 0.00 0.00 4.00
192 193 8.722394 GGAAGACTATTTTAAAGGAAGTGACTG 58.278 37.037 4.48 0.00 0.00 3.51
193 194 7.603024 CGGAAGACTATTTTAAAGGAAGTGACT 59.397 37.037 4.48 0.00 0.00 3.41
194 195 7.601508 TCGGAAGACTATTTTAAAGGAAGTGAC 59.398 37.037 4.48 0.00 33.31 3.67
195 196 7.673180 TCGGAAGACTATTTTAAAGGAAGTGA 58.327 34.615 4.48 0.00 33.31 3.41
196 197 7.603024 ACTCGGAAGACTATTTTAAAGGAAGTG 59.397 37.037 4.48 0.00 35.39 3.16
197 198 7.677892 ACTCGGAAGACTATTTTAAAGGAAGT 58.322 34.615 0.38 0.38 35.39 3.01
198 199 9.649167 TTACTCGGAAGACTATTTTAAAGGAAG 57.351 33.333 0.00 0.00 35.39 3.46
232 233 9.925268 GGACGTGTCGTATTAAAATGAATTATT 57.075 29.630 0.00 0.00 41.37 1.40
233 234 8.553696 GGGACGTGTCGTATTAAAATGAATTAT 58.446 33.333 0.00 0.00 41.37 1.28
234 235 7.548427 TGGGACGTGTCGTATTAAAATGAATTA 59.452 33.333 0.00 0.00 41.37 1.40
235 236 6.372103 TGGGACGTGTCGTATTAAAATGAATT 59.628 34.615 0.00 0.00 41.37 2.17
236 237 5.875910 TGGGACGTGTCGTATTAAAATGAAT 59.124 36.000 0.00 0.00 41.37 2.57
237 238 5.236282 TGGGACGTGTCGTATTAAAATGAA 58.764 37.500 0.00 0.00 41.37 2.57
238 239 4.818642 TGGGACGTGTCGTATTAAAATGA 58.181 39.130 0.00 0.00 41.37 2.57
239 240 5.522460 AGATGGGACGTGTCGTATTAAAATG 59.478 40.000 0.00 0.00 41.37 2.32
240 241 5.667466 AGATGGGACGTGTCGTATTAAAAT 58.333 37.500 0.00 0.00 41.37 1.82
241 242 5.075858 AGATGGGACGTGTCGTATTAAAA 57.924 39.130 0.00 0.00 41.37 1.52
242 243 4.724074 AGATGGGACGTGTCGTATTAAA 57.276 40.909 0.00 0.00 41.37 1.52
243 244 4.426416 CAAGATGGGACGTGTCGTATTAA 58.574 43.478 0.00 0.00 41.37 1.40
244 245 3.735820 GCAAGATGGGACGTGTCGTATTA 60.736 47.826 0.00 0.00 41.37 0.98
245 246 2.888594 CAAGATGGGACGTGTCGTATT 58.111 47.619 0.00 0.00 41.37 1.89
246 247 1.470979 GCAAGATGGGACGTGTCGTAT 60.471 52.381 0.00 0.00 41.37 3.06
247 248 0.108992 GCAAGATGGGACGTGTCGTA 60.109 55.000 0.00 0.00 41.37 3.43
248 249 1.374252 GCAAGATGGGACGTGTCGT 60.374 57.895 0.00 0.00 45.10 4.34
249 250 2.444624 CGCAAGATGGGACGTGTCG 61.445 63.158 0.00 0.00 43.02 4.35
250 251 1.080093 TCGCAAGATGGGACGTGTC 60.080 57.895 0.00 0.00 45.01 3.67
251 252 3.056458 TCGCAAGATGGGACGTGT 58.944 55.556 0.00 0.00 45.01 4.49
262 263 6.183360 CCATGTGTAAATTGTTTGATCGCAAG 60.183 38.462 0.00 0.00 35.04 4.01
263 264 5.632764 CCATGTGTAAATTGTTTGATCGCAA 59.367 36.000 0.00 0.75 0.00 4.85
264 265 5.159925 CCATGTGTAAATTGTTTGATCGCA 58.840 37.500 0.00 0.00 0.00 5.10
265 266 5.160641 ACCATGTGTAAATTGTTTGATCGC 58.839 37.500 0.00 0.00 0.00 4.58
266 267 6.464519 CGTACCATGTGTAAATTGTTTGATCG 59.535 38.462 0.00 0.00 0.00 3.69
267 268 7.523219 TCGTACCATGTGTAAATTGTTTGATC 58.477 34.615 0.00 0.00 0.00 2.92
268 269 7.441890 TCGTACCATGTGTAAATTGTTTGAT 57.558 32.000 0.00 0.00 0.00 2.57
269 270 6.862711 TCGTACCATGTGTAAATTGTTTGA 57.137 33.333 0.00 0.00 0.00 2.69
270 271 7.916128 TTTCGTACCATGTGTAAATTGTTTG 57.084 32.000 0.00 0.00 0.00 2.93
271 272 8.138712 ACATTTCGTACCATGTGTAAATTGTTT 58.861 29.630 0.00 0.00 32.19 2.83
272 273 7.653647 ACATTTCGTACCATGTGTAAATTGTT 58.346 30.769 0.00 0.00 32.19 2.83
273 274 7.209471 ACATTTCGTACCATGTGTAAATTGT 57.791 32.000 0.00 0.00 32.19 2.71
274 275 6.745450 GGACATTTCGTACCATGTGTAAATTG 59.255 38.462 5.03 0.00 33.62 2.32
275 276 6.402766 CGGACATTTCGTACCATGTGTAAATT 60.403 38.462 5.03 0.00 33.62 1.82
276 277 5.064198 CGGACATTTCGTACCATGTGTAAAT 59.936 40.000 5.03 0.00 33.62 1.40
277 278 4.389382 CGGACATTTCGTACCATGTGTAAA 59.611 41.667 5.03 0.00 33.62 2.01
278 279 3.927758 CGGACATTTCGTACCATGTGTAA 59.072 43.478 5.03 0.00 33.62 2.41
279 280 3.056678 ACGGACATTTCGTACCATGTGTA 60.057 43.478 5.03 0.00 39.22 2.90
280 281 2.289195 ACGGACATTTCGTACCATGTGT 60.289 45.455 5.03 0.00 39.22 3.72
281 282 2.343101 ACGGACATTTCGTACCATGTG 58.657 47.619 5.03 0.00 39.22 3.21
282 283 2.232941 AGACGGACATTTCGTACCATGT 59.767 45.455 0.68 0.68 41.22 3.21
283 284 2.888594 AGACGGACATTTCGTACCATG 58.111 47.619 0.00 0.00 41.22 3.66
284 285 3.604875 AAGACGGACATTTCGTACCAT 57.395 42.857 0.00 0.00 41.22 3.55
285 286 4.517952 TTAAGACGGACATTTCGTACCA 57.482 40.909 0.00 0.00 41.22 3.25
286 287 4.269363 CCATTAAGACGGACATTTCGTACC 59.731 45.833 0.00 0.00 41.22 3.34
287 288 4.866486 ACCATTAAGACGGACATTTCGTAC 59.134 41.667 0.00 0.00 41.22 3.67
288 289 5.075858 ACCATTAAGACGGACATTTCGTA 57.924 39.130 0.00 0.00 41.22 3.43
289 290 3.934068 ACCATTAAGACGGACATTTCGT 58.066 40.909 0.00 0.00 44.03 3.85
290 291 4.939509 AACCATTAAGACGGACATTTCG 57.060 40.909 0.00 0.00 0.00 3.46
291 292 6.249035 TCAAACCATTAAGACGGACATTTC 57.751 37.500 0.00 0.00 0.00 2.17
292 293 6.834168 ATCAAACCATTAAGACGGACATTT 57.166 33.333 0.00 0.00 0.00 2.32
293 294 6.882140 TGTATCAAACCATTAAGACGGACATT 59.118 34.615 0.00 0.00 0.00 2.71
294 295 6.411376 TGTATCAAACCATTAAGACGGACAT 58.589 36.000 0.00 0.00 0.00 3.06
295 296 5.795972 TGTATCAAACCATTAAGACGGACA 58.204 37.500 0.00 0.00 0.00 4.02
296 297 6.730960 TTGTATCAAACCATTAAGACGGAC 57.269 37.500 0.00 0.00 0.00 4.79
297 298 6.938030 AGTTTGTATCAAACCATTAAGACGGA 59.062 34.615 17.83 0.00 0.00 4.69
298 299 7.141100 AGTTTGTATCAAACCATTAAGACGG 57.859 36.000 17.83 0.00 0.00 4.79
299 300 8.901748 CAAAGTTTGTATCAAACCATTAAGACG 58.098 33.333 17.83 0.00 0.00 4.18
300 301 8.699749 GCAAAGTTTGTATCAAACCATTAAGAC 58.300 33.333 16.70 5.29 0.00 3.01
301 302 8.417106 TGCAAAGTTTGTATCAAACCATTAAGA 58.583 29.630 16.70 3.61 0.00 2.10
302 303 8.586570 TGCAAAGTTTGTATCAAACCATTAAG 57.413 30.769 16.70 7.85 0.00 1.85
303 304 8.948631 TTGCAAAGTTTGTATCAAACCATTAA 57.051 26.923 16.70 7.98 0.00 1.40
304 305 8.417106 TCTTGCAAAGTTTGTATCAAACCATTA 58.583 29.630 16.70 3.50 46.34 1.90
305 306 7.271511 TCTTGCAAAGTTTGTATCAAACCATT 58.728 30.769 16.70 12.36 46.34 3.16
306 307 6.815089 TCTTGCAAAGTTTGTATCAAACCAT 58.185 32.000 16.70 8.07 46.34 3.55
307 308 6.214191 TCTTGCAAAGTTTGTATCAAACCA 57.786 33.333 16.70 8.93 46.34 3.67
308 309 5.691754 CCTCTTGCAAAGTTTGTATCAAACC 59.308 40.000 16.70 6.94 46.34 3.27
309 310 6.273071 ACCTCTTGCAAAGTTTGTATCAAAC 58.727 36.000 16.70 14.89 46.34 2.93
310 311 6.463995 ACCTCTTGCAAAGTTTGTATCAAA 57.536 33.333 16.70 4.18 46.34 2.69
311 312 6.544197 TGTACCTCTTGCAAAGTTTGTATCAA 59.456 34.615 16.70 11.18 46.34 2.57
312 313 6.058833 TGTACCTCTTGCAAAGTTTGTATCA 58.941 36.000 16.70 4.08 46.34 2.15
313 314 6.554334 TGTACCTCTTGCAAAGTTTGTATC 57.446 37.500 16.70 1.45 46.34 2.24
314 315 5.048713 GCTGTACCTCTTGCAAAGTTTGTAT 60.049 40.000 16.70 0.16 46.34 2.29
315 316 4.274950 GCTGTACCTCTTGCAAAGTTTGTA 59.725 41.667 16.70 9.90 46.34 2.41
316 317 3.066760 GCTGTACCTCTTGCAAAGTTTGT 59.933 43.478 16.70 0.00 46.34 2.83
317 318 3.316308 AGCTGTACCTCTTGCAAAGTTTG 59.684 43.478 11.41 11.41 46.34 2.93
318 319 3.555966 AGCTGTACCTCTTGCAAAGTTT 58.444 40.909 0.00 0.00 46.34 2.66
319 320 3.214696 AGCTGTACCTCTTGCAAAGTT 57.785 42.857 0.00 0.00 46.34 2.66
320 321 2.938956 AGCTGTACCTCTTGCAAAGT 57.061 45.000 0.00 0.91 46.34 2.66
322 323 6.325028 AGAGATATAGCTGTACCTCTTGCAAA 59.675 38.462 8.54 0.00 0.00 3.68
323 324 5.835819 AGAGATATAGCTGTACCTCTTGCAA 59.164 40.000 8.54 0.00 0.00 4.08
324 325 5.242615 CAGAGATATAGCTGTACCTCTTGCA 59.757 44.000 11.56 0.00 0.00 4.08
325 326 5.708948 CAGAGATATAGCTGTACCTCTTGC 58.291 45.833 11.56 0.00 0.00 4.01
326 327 5.336372 GGCAGAGATATAGCTGTACCTCTTG 60.336 48.000 11.56 8.75 34.66 3.02
327 328 4.770010 GGCAGAGATATAGCTGTACCTCTT 59.230 45.833 11.56 0.00 34.66 2.85
328 329 4.202620 TGGCAGAGATATAGCTGTACCTCT 60.203 45.833 8.54 8.54 34.66 3.69
329 330 4.082845 TGGCAGAGATATAGCTGTACCTC 58.917 47.826 3.66 3.66 34.66 3.85
330 331 4.119556 TGGCAGAGATATAGCTGTACCT 57.880 45.455 6.03 0.00 34.66 3.08
331 332 4.561105 GTTGGCAGAGATATAGCTGTACC 58.439 47.826 0.00 0.00 34.66 3.34
332 333 4.230657 CGTTGGCAGAGATATAGCTGTAC 58.769 47.826 0.00 0.00 34.66 2.90
333 334 3.305403 GCGTTGGCAGAGATATAGCTGTA 60.305 47.826 0.00 0.00 39.62 2.74
334 335 2.546795 GCGTTGGCAGAGATATAGCTGT 60.547 50.000 0.00 0.00 39.62 4.40
335 336 2.064762 GCGTTGGCAGAGATATAGCTG 58.935 52.381 0.00 0.00 39.62 4.24
336 337 1.336332 CGCGTTGGCAGAGATATAGCT 60.336 52.381 0.00 0.00 39.92 3.32
337 338 1.063806 CGCGTTGGCAGAGATATAGC 58.936 55.000 0.00 0.00 39.92 2.97
338 339 2.320367 GACGCGTTGGCAGAGATATAG 58.680 52.381 15.53 0.00 39.92 1.31
339 340 1.334689 CGACGCGTTGGCAGAGATATA 60.335 52.381 19.10 0.00 39.92 0.86
340 341 0.595053 CGACGCGTTGGCAGAGATAT 60.595 55.000 19.10 0.00 39.92 1.63
394 395 1.202758 ACTCATCGTTTGCCTTGTCCA 60.203 47.619 0.00 0.00 0.00 4.02
413 414 1.209640 GGACAGAGACCGTCGTCAC 59.790 63.158 7.18 0.00 41.87 3.67
416 417 1.830279 TAATGGACAGAGACCGTCGT 58.170 50.000 0.00 0.00 34.04 4.34
429 430 5.391256 TCTAGAGCGGATAAGGTTAATGGA 58.609 41.667 0.00 0.00 0.00 3.41
435 436 3.637694 GGTCTTCTAGAGCGGATAAGGTT 59.362 47.826 0.00 0.00 32.69 3.50
483 484 1.214325 CAGATGGGCGACACGTGTA 59.786 57.895 23.44 5.76 0.00 2.90
518 519 0.179006 GAAGGCATGGGAGATGGGAC 60.179 60.000 0.00 0.00 0.00 4.46
519 520 1.355718 GGAAGGCATGGGAGATGGGA 61.356 60.000 0.00 0.00 0.00 4.37
521 522 0.178998 CAGGAAGGCATGGGAGATGG 60.179 60.000 0.00 0.00 0.00 3.51
523 524 0.842635 GACAGGAAGGCATGGGAGAT 59.157 55.000 0.00 0.00 0.00 2.75
524 525 0.252881 AGACAGGAAGGCATGGGAGA 60.253 55.000 0.00 0.00 0.00 3.71
525 526 0.107312 CAGACAGGAAGGCATGGGAG 60.107 60.000 0.00 0.00 0.00 4.30
584 590 4.569023 CTGCATGCATGGCCGCAG 62.569 66.667 27.34 22.69 46.99 5.18
624 644 4.660938 GGTTCCACCCTGGCGCTT 62.661 66.667 7.64 0.00 37.47 4.68
642 662 1.456892 TGACACGTGTGAGGGAGGT 60.457 57.895 28.82 0.00 0.00 3.85
652 672 3.101428 GTACGCGGGTGACACGTG 61.101 66.667 20.15 20.15 43.32 4.49
766 786 7.468496 TCTAGTCTTCCCTGAGTACTAAACTT 58.532 38.462 0.00 0.00 39.07 2.66
767 787 7.030234 TCTAGTCTTCCCTGAGTACTAAACT 57.970 40.000 0.00 0.00 42.80 2.66
768 788 7.700022 TTCTAGTCTTCCCTGAGTACTAAAC 57.300 40.000 0.00 0.00 0.00 2.01
769 789 9.986157 TTATTCTAGTCTTCCCTGAGTACTAAA 57.014 33.333 0.00 0.00 0.00 1.85
770 790 9.986157 TTTATTCTAGTCTTCCCTGAGTACTAA 57.014 33.333 0.00 0.00 0.00 2.24
771 791 9.986157 TTTTATTCTAGTCTTCCCTGAGTACTA 57.014 33.333 0.00 0.00 0.00 1.82
772 792 8.896722 TTTTATTCTAGTCTTCCCTGAGTACT 57.103 34.615 0.00 0.00 0.00 2.73
773 793 9.752961 GATTTTATTCTAGTCTTCCCTGAGTAC 57.247 37.037 0.00 0.00 0.00 2.73
779 840 6.388394 AGGCAGATTTTATTCTAGTCTTCCCT 59.612 38.462 0.00 0.00 0.00 4.20
795 856 6.098266 ACAAAGAGTTGGTTAAAGGCAGATTT 59.902 34.615 0.00 0.00 39.22 2.17
919 1001 3.066900 CGCAGGAAGATATATACCGAGGG 59.933 52.174 0.00 0.00 0.00 4.30
926 1008 3.056821 ACGCAAGCGCAGGAAGATATATA 60.057 43.478 15.09 0.00 44.19 0.86
1311 1394 7.362056 GGACTGCAAATGACAAGCTCTTAATAA 60.362 37.037 0.00 0.00 0.00 1.40
1312 1395 6.094048 GGACTGCAAATGACAAGCTCTTAATA 59.906 38.462 0.00 0.00 0.00 0.98
1313 1396 5.105997 GGACTGCAAATGACAAGCTCTTAAT 60.106 40.000 0.00 0.00 0.00 1.40
1314 1397 4.216257 GGACTGCAAATGACAAGCTCTTAA 59.784 41.667 0.00 0.00 0.00 1.85
1324 1407 1.747355 CAGGGATGGACTGCAAATGAC 59.253 52.381 0.00 0.00 0.00 3.06
1710 1825 1.752694 TTTAAGGCCGGGCAGATGC 60.753 57.895 31.59 2.31 41.14 3.91
1711 1826 0.394352 AGTTTAAGGCCGGGCAGATG 60.394 55.000 31.59 0.00 0.00 2.90
1712 1827 0.394352 CAGTTTAAGGCCGGGCAGAT 60.394 55.000 31.59 17.94 0.00 2.90
1713 1828 1.002624 CAGTTTAAGGCCGGGCAGA 60.003 57.895 31.59 14.74 0.00 4.26
1714 1829 1.002624 TCAGTTTAAGGCCGGGCAG 60.003 57.895 31.59 10.30 0.00 4.85
1715 1830 1.002624 CTCAGTTTAAGGCCGGGCA 60.003 57.895 31.59 7.51 0.00 5.36
1716 1831 0.107165 ATCTCAGTTTAAGGCCGGGC 60.107 55.000 22.67 22.67 0.00 6.13
1717 1832 1.486726 AGATCTCAGTTTAAGGCCGGG 59.513 52.381 2.18 0.00 0.00 5.73
1718 1833 2.990066 AGATCTCAGTTTAAGGCCGG 57.010 50.000 0.00 0.00 0.00 6.13
1719 1834 5.629079 AAAAAGATCTCAGTTTAAGGCCG 57.371 39.130 0.00 0.00 0.00 6.13
1919 2034 2.528041 ACTTGGTCAGTCCGAAAGTC 57.472 50.000 0.00 0.00 39.52 3.01
1941 2056 9.715121 ATATAAGCAGAGTCACTAGTAGTAGAC 57.285 37.037 11.68 17.92 31.19 2.59
2139 2254 1.559682 GCCAAGGACCCAATCTCTGTA 59.440 52.381 0.00 0.00 0.00 2.74
2216 2331 6.864342 ACTAGTGTTTATCTTATCAGCGTGT 58.136 36.000 0.00 0.00 0.00 4.49
2464 2583 9.908152 TTAATATGGATCGACAATGTACTAGTG 57.092 33.333 5.39 0.00 0.00 2.74
2476 2595 5.633601 TCAGCGACAATTAATATGGATCGAC 59.366 40.000 9.55 0.00 0.00 4.20
2522 2650 6.199908 GTGTCACATACTATTGCTGAGATCAC 59.800 42.308 0.00 0.00 0.00 3.06
2588 2716 2.448542 ACCACACCTCCCTGCACT 60.449 61.111 0.00 0.00 0.00 4.40
2609 2737 4.539083 AACGTCGTGCACAGGCCA 62.539 61.111 18.64 0.00 40.13 5.36
2758 2886 3.564027 GCTGCATGGCCGACGTAC 61.564 66.667 0.00 0.00 0.00 3.67
2759 2887 4.830765 GGCTGCATGGCCGACGTA 62.831 66.667 0.59 0.00 42.82 3.57
2790 2921 3.248363 TGCAGCTACGCATTGACATATTC 59.752 43.478 0.00 0.00 36.86 1.75
2819 2950 3.479489 TGCTGATGTCAAATGTCAGTGT 58.521 40.909 3.71 0.00 41.04 3.55
2831 2962 5.663795 ACGAATATGACAATGCTGATGTC 57.336 39.130 9.29 9.29 45.82 3.06
2974 3105 4.380444 GGCCTCTCGATATCAGATTCAGTC 60.380 50.000 3.12 0.00 0.00 3.51
3011 3142 1.933247 TTTGCTTTTTGCCCAACTCG 58.067 45.000 0.00 0.00 42.00 4.18
3097 3228 5.652014 TCCAAACAATATCTCCGCAAAAGAT 59.348 36.000 0.00 0.00 37.29 2.40
3149 3280 3.435186 GGGACTTTGCTCAGCGGC 61.435 66.667 0.00 0.00 0.00 6.53
3163 3294 1.098050 GGTAAAGCGAGAGTACGGGA 58.902 55.000 0.00 0.00 0.00 5.14
3166 3297 1.396301 ACGAGGTAAAGCGAGAGTACG 59.604 52.381 0.00 0.00 0.00 3.67
3283 3414 9.656040 TCATTCATTTTGCTTAGCATGTAATTT 57.344 25.926 8.05 0.00 38.76 1.82
3284 3415 9.656040 TTCATTCATTTTGCTTAGCATGTAATT 57.344 25.926 8.05 0.00 38.76 1.40
3285 3416 9.826574 ATTCATTCATTTTGCTTAGCATGTAAT 57.173 25.926 8.05 5.87 38.76 1.89
3286 3417 9.304731 GATTCATTCATTTTGCTTAGCATGTAA 57.695 29.630 8.05 3.59 38.76 2.41
3287 3418 8.689061 AGATTCATTCATTTTGCTTAGCATGTA 58.311 29.630 8.05 0.00 38.76 2.29
3288 3419 7.553334 AGATTCATTCATTTTGCTTAGCATGT 58.447 30.769 8.05 0.00 38.76 3.21
3289 3420 9.692749 ATAGATTCATTCATTTTGCTTAGCATG 57.307 29.630 8.05 3.60 38.76 4.06
3314 3445 9.871238 TTGAGCGTTCTAAGAATTTTAGAGTAT 57.129 29.630 0.00 1.53 33.13 2.12
3315 3446 9.355215 CTTGAGCGTTCTAAGAATTTTAGAGTA 57.645 33.333 0.00 0.00 33.13 2.59
3316 3447 7.148557 GCTTGAGCGTTCTAAGAATTTTAGAGT 60.149 37.037 12.93 0.62 33.13 3.24
3317 3448 7.176741 GCTTGAGCGTTCTAAGAATTTTAGAG 58.823 38.462 12.93 3.30 33.13 2.43
3318 3449 7.061752 GCTTGAGCGTTCTAAGAATTTTAGA 57.938 36.000 12.93 6.19 0.00 2.10
3352 3483 7.148188 TGCTGATAATGTCCTTGCTTTAGAAAG 60.148 37.037 0.00 0.00 39.03 2.62
3353 3484 6.658816 TGCTGATAATGTCCTTGCTTTAGAAA 59.341 34.615 0.00 0.00 0.00 2.52
3354 3485 6.179756 TGCTGATAATGTCCTTGCTTTAGAA 58.820 36.000 0.00 0.00 0.00 2.10
3355 3486 5.744171 TGCTGATAATGTCCTTGCTTTAGA 58.256 37.500 0.00 0.00 0.00 2.10
3356 3487 5.008415 CCTGCTGATAATGTCCTTGCTTTAG 59.992 44.000 0.00 0.00 0.00 1.85
3357 3488 4.883585 CCTGCTGATAATGTCCTTGCTTTA 59.116 41.667 0.00 0.00 0.00 1.85
3358 3489 3.698040 CCTGCTGATAATGTCCTTGCTTT 59.302 43.478 0.00 0.00 0.00 3.51
3359 3490 3.285484 CCTGCTGATAATGTCCTTGCTT 58.715 45.455 0.00 0.00 0.00 3.91
3399 3530 0.037882 AGGCATCGACATAGGCATCG 60.038 55.000 0.00 0.00 39.72 3.84
3433 3568 0.837691 ACCTGCACATCAGACCCTGA 60.838 55.000 0.00 0.00 45.72 3.86
3592 3727 3.248266 GCTTAGCGAGTTTAAGAACCGA 58.752 45.455 0.00 0.00 36.39 4.69
3670 3805 1.001378 GTGCTCTTTCACCACGCAATT 60.001 47.619 0.00 0.00 31.77 2.32
3774 3915 4.771114 TTTATCATGGACCGGACATCTT 57.229 40.909 9.46 4.56 0.00 2.40
3830 3971 5.641709 GGAAAGCTAACAAGGTAAGCATTC 58.358 41.667 3.62 3.62 41.07 2.67
3831 3972 4.156008 CGGAAAGCTAACAAGGTAAGCATT 59.844 41.667 0.00 0.00 38.75 3.56
3832 3973 3.689649 CGGAAAGCTAACAAGGTAAGCAT 59.310 43.478 0.00 0.00 38.75 3.79
3833 3974 3.071479 CGGAAAGCTAACAAGGTAAGCA 58.929 45.455 0.00 0.00 38.75 3.91
3834 3975 3.072211 ACGGAAAGCTAACAAGGTAAGC 58.928 45.455 0.00 0.00 36.48 3.09
3917 4058 5.714806 TGATCTCCATGCGGTAATAGTCATA 59.285 40.000 0.00 0.00 0.00 2.15
3967 4108 3.362706 ACATGAAGCCAAATCTGCTGAT 58.637 40.909 0.00 0.00 39.48 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.