AutoCloner

Multiple sequence alignment - TraesCS7D01G284100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS7D01G284100	chr7D	100.000	7356	0	0	1	7356	298508620	298515975	0.000000e+00	13585.0
1	TraesCS7D01G284100	chr7B	93.240	6376	160	102	536	6797	277204922	277211140	0.000000e+00	9136.0
2	TraesCS7D01G284100	chr7B	94.227	485	28	0	6872	7356	277211138	277211622	0.000000e+00	741.0
3	TraesCS7D01G284100	chr7A	95.795	3044	42	27	3733	6722	325712120	325709109	0.000000e+00	4833.0
4	TraesCS7D01G284100	chr7A	95.610	2141	28	20	1183	3287	325715547	325713437	0.000000e+00	3373.0
5	TraesCS7D01G284100	chr7A	94.068	472	7	5	421	876	325716316	325715850	0.000000e+00	697.0
6	TraesCS7D01G284100	chr7A	92.019	426	33	1	6923	7347	325698053	325697628	1.370000e-166	597.0
7	TraesCS7D01G284100	chr7A	85.950	242	28	4	166	404	325731966	325731728	3.410000e-63	254.0
8	TraesCS7D01G284100	chr7A	94.578	166	3	1	3574	3739	325712456	325712297	1.230000e-62	252.0
9	TraesCS7D01G284100	chr7A	84.615	208	5	7	3376	3583	325712880	325712700	1.630000e-41	182.0
10	TraesCS7D01G284100	chr7A	90.441	136	13	0	30	165	325732136	325732001	5.860000e-41	180.0
11	TraesCS7D01G284100	chr7A	96.203	79	3	0	6719	6797	325706545	325706467	5.990000e-26	130.0
12	TraesCS7D01G284100	chr7A	98.246	57	1	0	6872	6928	325706469	325706413	4.700000e-17	100.0
13	TraesCS7D01G284100	chr7A	100.000	39	0	0	6834	6872	325706483	325706445	1.020000e-08	73.1
14	TraesCS7D01G284100	chr5A	83.268	257	34	4	6872	7126	652140224	652140473	2.060000e-55	228.0
15	TraesCS7D01G284100	chr2B	80.144	277	47	8	3984	4256	487232109	487231837	4.500000e-47	200.0
16	TraesCS7D01G284100	chr2B	75.851	323	62	13	3975	4286	511134538	511134855	4.600000e-32	150.0
17	TraesCS7D01G284100	chr5D	89.726	146	12	2	23	165	499229615	499229760	4.530000e-42	183.0
18	TraesCS7D01G284100	chr5D	79.433	141	19	9	166	301	320372157	320372292	2.830000e-14	91.6
19	TraesCS7D01G284100	chr5D	94.286	35	1	1	166	199	519412739	519412705	1.300000e-02	52.8
20	TraesCS7D01G284100	chrUn	89.855	138	13	1	32	169	171670605	171670469	7.590000e-40	176.0
21	TraesCS7D01G284100	chrUn	90.370	135	12	1	32	166	171735725	171735858	7.590000e-40	176.0
22	TraesCS7D01G284100	chr3D	90.226	133	13	0	32	164	333005470	333005338	2.730000e-39	174.0
23	TraesCS7D01G284100	chr3D	86.364	66	7	2	381	445	277064998	277065062	3.680000e-08	71.3
24	TraesCS7D01G284100	chr3D	97.059	34	1	0	2615	2648	477013676	477013643	2.870000e-04	58.4
25	TraesCS7D01G284100	chr1A	90.299	134	12	1	32	165	491654689	491654821	2.730000e-39	174.0
26	TraesCS7D01G284100	chr1A	100.000	33	0	0	1	33	557874883	557874851	2.220000e-05	62.1
27	TraesCS7D01G284100	chr6D	89.209	139	14	1	27	165	446643096	446643233	9.810000e-39	172.0
28	TraesCS7D01G284100	chr6D	88.571	70	8	0	2787	2856	353350181	353350250	1.310000e-12	86.1
29	TraesCS7D01G284100	chr6B	88.435	147	12	4	23	165	691005715	691005570	9.810000e-39	172.0
30	TraesCS7D01G284100	chr6B	78.453	181	37	2	2787	2966	239357576	239357755	4.660000e-22	117.0
31	TraesCS7D01G284100	chr6B	88.571	70	8	0	2787	2856	525114242	525114173	1.310000e-12	86.1
32	TraesCS7D01G284100	chr2D	89.130	138	15	0	32	169	329144728	329144591	9.810000e-39	172.0
33	TraesCS7D01G284100	chr2D	75.926	324	58	16	3975	4285	432853868	432854184	1.650000e-31	148.0
34	TraesCS7D01G284100	chr2D	84.375	128	19	1	39	166	598690171	598690297	2.790000e-24	124.0
35	TraesCS7D01G284100	chr2D	82.812	128	21	1	42	169	109741733	109741607	6.030000e-21	113.0
36	TraesCS7D01G284100	chr4D	86.822	129	14	1	40	165	12036953	12036825	2.770000e-29	141.0
37	TraesCS7D01G284100	chr4D	80.645	124	24	0	42	165	16642302	16642425	6.070000e-16	97.1
38	TraesCS7D01G284100	chr1D	85.827	127	18	0	39	165	468282465	468282591	1.290000e-27	135.0
39	TraesCS7D01G284100	chr1D	84.000	125	17	1	44	165	233482436	233482560	4.660000e-22	117.0
40	TraesCS7D01G284100	chr1D	100.000	30	0	0	1	30	492905628	492905657	1.000000e-03	56.5
41	TraesCS7D01G284100	chr1D	75.342	146	16	11	166	299	392633839	392633702	1.300000e-02	52.8
42	TraesCS7D01G284100	chr6A	79.558	181	35	2	2787	2966	182474757	182474936	2.150000e-25	128.0
43	TraesCS7D01G284100	chr6A	75.676	185	37	7	2787	2967	489228689	489228509	1.310000e-12	86.1
44	TraesCS7D01G284100	chr6A	94.286	35	1	1	166	199	506226092	506226126	1.300000e-02	52.8
45	TraesCS7D01G284100	chr3B	95.455	44	2	0	39	82	81338302	81338259	3.680000e-08	71.3
46	TraesCS7D01G284100	chr3B	97.059	34	1	0	2615	2648	636246229	636246196	2.870000e-04	58.4
47	TraesCS7D01G284100	chr5B	77.692	130	15	8	166	283	110578011	110577884	4.760000e-07	67.6
48	TraesCS7D01G284100	chr5B	100.000	28	0	0	166	193	338954582	338954555	1.300000e-02	52.8
49	TraesCS7D01G284100	chr5B	94.286	35	1	1	166	199	391464881	391464847	1.300000e-02	52.8
50	TraesCS7D01G284100	chr3A	97.059	34	1	0	2615	2648	620607904	620607871	2.870000e-04	58.4
51	TraesCS7D01G284100	chr4B	94.286	35	1	1	166	199	595465193	595465227	1.300000e-02	52.8

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS7D01G284100	chr7D	298508620	298515975	7355	False	13585.0000	13585	100.000000	1	7356	1	chr7D.!!$F1	7355
1	TraesCS7D01G284100	chr7B	277204922	277211622	6700	False	4938.5000	9136	93.733500	536	7356	2	chr7B.!!$F1	6820
2	TraesCS7D01G284100	chr7A	325706413	325716316	9903	True	1205.0125	4833	94.889375	421	6928	8	chr7A.!!$R2	6507

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
173	174	0.036010	AGGAAACTCACGGGCTCATG	60.036	55.0	0.00	0.00	32.90	3.07	F
389	390	0.110373	GACGCATTGTCGACCCAAAC	60.110	55.0	14.12	0.00	37.96	2.93	F
391	392	0.309302	CGCATTGTCGACCCAAACAA	59.691	50.0	14.12	0.00	39.52	2.83	F
1791	1829	0.036388	ACTACATGGCCACCTTCGTG	60.036	55.0	8.16	3.25	39.91	4.35	F
2615	2658	0.109412	GGAAGAGTACGGTGGTGTCG	60.109	60.0	0.00	0.00	0.00	4.35	F
3445	4020	0.033796	TAGTACGTACCTGCCTGCCT	60.034	55.0	21.80	2.94	0.00	4.75	F
3509	4091	0.309922	CACAACACAAGCAGCTGAGG	59.690	55.0	20.43	8.08	0.00	3.86	F
3710	4565	0.534877	TGGCAGTGGTACAGCACTTG	60.535	55.0	11.21	8.49	41.80	3.16	F
4520	5588	0.398806	CATGGGCATGGGAATGGGAA	60.399	55.0	0.00	0.00	35.24	3.97	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1210	1248	1.081242	CAGACGCATTGTTGGTGCC	60.081	57.895	0.00	0.00	39.39	5.01	R
1211	1249	1.081242	CCAGACGCATTGTTGGTGC	60.081	57.895	0.00	0.00	39.18	5.01	R
2288	2331	3.804193	CTTCCCTTTCAGCGGCGC	61.804	66.667	26.86	26.86	0.00	6.53	R
3445	4020	0.323725	GAAAATGGAGGAGGCAGGCA	60.324	55.000	0.00	0.00	0.00	4.75	R
4519	5587	0.678048	GGAACGCCAGCTTCTCCATT	60.678	55.000	0.00	0.00	0.00	3.16	R
4520	5588	1.078143	GGAACGCCAGCTTCTCCAT	60.078	57.895	0.00	0.00	0.00	3.41	R
4521	5589	2.347490	GGAACGCCAGCTTCTCCA	59.653	61.111	0.00	0.00	0.00	3.86	R
6335	7409	0.523072	CAAACGTTGGATGCAGAGGG	59.477	55.000	0.00	0.00	0.00	4.30	R
6891	10569	0.031917	TCTACAATAGTGGGGGCGGA	60.032	55.000	0.00	0.00	0.00	5.54	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
17	18	4.567195	TGGGAGGTGATGACTGCT	57.433	55.556	0.00	0.00	0.00	4.24
18	19	2.777536	TGGGAGGTGATGACTGCTT	58.222	52.632	0.00	0.00	0.00	3.91
19	20	0.325933	TGGGAGGTGATGACTGCTTG	59.674	55.000	0.00	0.00	0.00	4.01
20	21	0.326264	GGGAGGTGATGACTGCTTGT	59.674	55.000	0.00	0.00	0.00	3.16
21	22	1.446907	GGAGGTGATGACTGCTTGTG	58.553	55.000	0.00	0.00	0.00	3.33
22	23	1.271054	GGAGGTGATGACTGCTTGTGT	60.271	52.381	0.00	0.00	0.00	3.72
23	24	1.802960	GAGGTGATGACTGCTTGTGTG	59.197	52.381	0.00	0.00	0.00	3.82
24	25	1.417517	AGGTGATGACTGCTTGTGTGA	59.582	47.619	0.00	0.00	0.00	3.58
25	26	2.039480	AGGTGATGACTGCTTGTGTGAT	59.961	45.455	0.00	0.00	0.00	3.06
26	27	2.417933	GGTGATGACTGCTTGTGTGATC	59.582	50.000	0.00	0.00	0.00	2.92
27	28	3.069289	GTGATGACTGCTTGTGTGATCA	58.931	45.455	0.00	0.00	36.12	2.92
28	29	3.688185	GTGATGACTGCTTGTGTGATCAT	59.312	43.478	0.00	0.00	39.43	2.45
29	30	3.687698	TGATGACTGCTTGTGTGATCATG	59.312	43.478	0.00	0.00	34.20	3.07
30	31	3.405823	TGACTGCTTGTGTGATCATGA	57.594	42.857	0.00	0.00	0.00	3.07
31	32	3.742385	TGACTGCTTGTGTGATCATGAA	58.258	40.909	0.00	0.00	0.00	2.57
32	33	4.329392	TGACTGCTTGTGTGATCATGAAT	58.671	39.130	0.00	0.00	0.00	2.57
33	34	4.155280	TGACTGCTTGTGTGATCATGAATG	59.845	41.667	0.00	0.00	0.00	2.67
34	35	4.329392	ACTGCTTGTGTGATCATGAATGA	58.671	39.130	0.00	0.00	41.70	2.57
35	36	4.395231	ACTGCTTGTGTGATCATGAATGAG	59.605	41.667	0.00	0.00	40.64	2.90
36	37	3.128068	TGCTTGTGTGATCATGAATGAGC	59.872	43.478	0.00	5.35	43.14	4.26
37	38	3.377485	GCTTGTGTGATCATGAATGAGCT	59.623	43.478	9.71	0.00	43.23	4.09
38	39	4.496010	GCTTGTGTGATCATGAATGAGCTC	60.496	45.833	6.82	6.82	43.23	4.09
39	40	3.538591	TGTGTGATCATGAATGAGCTCC	58.461	45.455	12.15	0.00	43.23	4.70
40	41	2.877168	GTGTGATCATGAATGAGCTCCC	59.123	50.000	12.15	0.87	43.23	4.30
41	42	2.141517	GTGATCATGAATGAGCTCCCG	58.858	52.381	12.15	0.00	43.23	5.14
42	43	2.041701	TGATCATGAATGAGCTCCCGA	58.958	47.619	12.15	0.00	43.23	5.14
43	44	2.435437	TGATCATGAATGAGCTCCCGAA	59.565	45.455	12.15	0.00	43.23	4.30
44	45	3.118298	TGATCATGAATGAGCTCCCGAAA	60.118	43.478	12.15	0.00	43.23	3.46
45	46	2.632377	TCATGAATGAGCTCCCGAAAC	58.368	47.619	12.15	0.00	32.11	2.78
46	47	1.328680	CATGAATGAGCTCCCGAAACG	59.671	52.381	12.15	0.00	0.00	3.60
47	48	0.320374	TGAATGAGCTCCCGAAACGT	59.680	50.000	12.15	0.00	0.00	3.99
48	49	1.546923	TGAATGAGCTCCCGAAACGTA	59.453	47.619	12.15	0.00	0.00	3.57
49	50	2.167693	TGAATGAGCTCCCGAAACGTAT	59.832	45.455	12.15	0.00	0.00	3.06
50	51	2.510768	ATGAGCTCCCGAAACGTATC	57.489	50.000	12.15	0.00	0.00	2.24
51	52	1.471119	TGAGCTCCCGAAACGTATCT	58.529	50.000	12.15	0.00	0.00	1.98
52	53	2.646930	TGAGCTCCCGAAACGTATCTA	58.353	47.619	12.15	0.00	0.00	1.98
53	54	2.357009	TGAGCTCCCGAAACGTATCTAC	59.643	50.000	12.15	0.00	0.00	2.59
69	70	5.903810	GTATCTACGATCAAGGGTTTCAGT	58.096	41.667	0.00	0.00	0.00	3.41
70	71	4.884668	TCTACGATCAAGGGTTTCAGTT	57.115	40.909	0.00	0.00	0.00	3.16
71	72	4.817517	TCTACGATCAAGGGTTTCAGTTC	58.182	43.478	0.00	0.00	0.00	3.01
72	73	2.779506	ACGATCAAGGGTTTCAGTTCC	58.220	47.619	0.00	0.00	0.00	3.62
73	74	2.105821	ACGATCAAGGGTTTCAGTTCCA	59.894	45.455	0.00	0.00	0.00	3.53
74	75	2.744202	CGATCAAGGGTTTCAGTTCCAG	59.256	50.000	0.00	0.00	0.00	3.86
75	76	2.656947	TCAAGGGTTTCAGTTCCAGG	57.343	50.000	0.00	0.00	0.00	4.45
76	77	1.144913	TCAAGGGTTTCAGTTCCAGGG	59.855	52.381	0.00	0.00	0.00	4.45
77	78	1.133482	CAAGGGTTTCAGTTCCAGGGT	60.133	52.381	0.00	0.00	0.00	4.34
78	79	0.478507	AGGGTTTCAGTTCCAGGGTG	59.521	55.000	0.00	0.00	0.00	4.61
79	80	0.476771	GGGTTTCAGTTCCAGGGTGA	59.523	55.000	0.00	0.00	0.00	4.02
80	81	1.605753	GGTTTCAGTTCCAGGGTGAC	58.394	55.000	0.00	0.00	0.00	3.67
81	82	1.133915	GGTTTCAGTTCCAGGGTGACA	60.134	52.381	0.00	0.00	0.00	3.58
82	83	2.650322	GTTTCAGTTCCAGGGTGACAA	58.350	47.619	0.00	0.00	0.00	3.18
83	84	3.222603	GTTTCAGTTCCAGGGTGACAAT	58.777	45.455	0.00	0.00	0.00	2.71
84	85	2.566833	TCAGTTCCAGGGTGACAATG	57.433	50.000	0.00	0.00	0.00	2.82
85	86	1.774254	TCAGTTCCAGGGTGACAATGT	59.226	47.619	0.00	0.00	0.00	2.71
86	87	2.174639	TCAGTTCCAGGGTGACAATGTT	59.825	45.455	0.00	0.00	0.00	2.71
87	88	2.294233	CAGTTCCAGGGTGACAATGTTG	59.706	50.000	0.00	0.00	0.00	3.33
88	89	2.091885	AGTTCCAGGGTGACAATGTTGT	60.092	45.455	0.00	0.00	45.65	3.32
89	90	1.979855	TCCAGGGTGACAATGTTGTG	58.020	50.000	2.65	0.00	42.43	3.33
90	91	0.314935	CCAGGGTGACAATGTTGTGC	59.685	55.000	2.65	0.00	42.43	4.57
91	92	0.314935	CAGGGTGACAATGTTGTGCC	59.685	55.000	2.65	5.50	42.43	5.01
92	93	0.185901	AGGGTGACAATGTTGTGCCT	59.814	50.000	2.65	0.00	42.43	4.75
93	94	0.314935	GGGTGACAATGTTGTGCCTG	59.685	55.000	2.65	0.00	42.43	4.85
94	95	1.317613	GGTGACAATGTTGTGCCTGA	58.682	50.000	2.65	0.00	42.43	3.86
95	96	1.267806	GGTGACAATGTTGTGCCTGAG	59.732	52.381	2.65	0.00	42.43	3.35
96	97	0.953727	TGACAATGTTGTGCCTGAGC	59.046	50.000	2.65	0.00	42.43	4.26
105	106	3.317109	TGCCTGAGCATGGAGGAG	58.683	61.111	0.00	0.00	46.52	3.69
106	107	2.203181	GCCTGAGCATGGAGGAGC	60.203	66.667	0.00	0.00	39.53	4.70
107	108	2.108566	CCTGAGCATGGAGGAGCG	59.891	66.667	0.00	0.00	35.48	5.03
108	109	2.108566	CTGAGCATGGAGGAGCGG	59.891	66.667	0.00	0.00	35.48	5.52
109	110	4.166888	TGAGCATGGAGGAGCGGC	62.167	66.667	0.00	0.00	35.48	6.53
110	111	4.166888	GAGCATGGAGGAGCGGCA	62.167	66.667	1.45	0.00	35.48	5.69
111	112	3.687321	GAGCATGGAGGAGCGGCAA	62.687	63.158	1.45	0.00	35.48	4.52
112	113	3.512516	GCATGGAGGAGCGGCAAC	61.513	66.667	1.45	0.00	0.00	4.17
130	131	3.958704	CAACGTTTGCACAGTTTATCCA	58.041	40.909	0.00	0.00	0.00	3.41
131	132	4.355437	CAACGTTTGCACAGTTTATCCAA	58.645	39.130	0.00	0.00	0.00	3.53
132	133	4.846779	ACGTTTGCACAGTTTATCCAAT	57.153	36.364	0.00	0.00	0.00	3.16
133	134	5.195001	ACGTTTGCACAGTTTATCCAATT	57.805	34.783	0.00	0.00	0.00	2.32
134	135	5.596845	ACGTTTGCACAGTTTATCCAATTT	58.403	33.333	0.00	0.00	0.00	1.82
135	136	5.689961	ACGTTTGCACAGTTTATCCAATTTC	59.310	36.000	0.00	0.00	0.00	2.17
136	137	5.689514	CGTTTGCACAGTTTATCCAATTTCA	59.310	36.000	0.00	0.00	0.00	2.69
137	138	6.365789	CGTTTGCACAGTTTATCCAATTTCAT	59.634	34.615	0.00	0.00	0.00	2.57
138	139	7.410728	CGTTTGCACAGTTTATCCAATTTCATC	60.411	37.037	0.00	0.00	0.00	2.92
139	140	6.587206	TGCACAGTTTATCCAATTTCATCA	57.413	33.333	0.00	0.00	0.00	3.07
140	141	7.172868	TGCACAGTTTATCCAATTTCATCAT	57.827	32.000	0.00	0.00	0.00	2.45
141	142	7.613585	TGCACAGTTTATCCAATTTCATCATT	58.386	30.769	0.00	0.00	0.00	2.57
142	143	8.747471	TGCACAGTTTATCCAATTTCATCATTA	58.253	29.630	0.00	0.00	0.00	1.90
143	144	9.585099	GCACAGTTTATCCAATTTCATCATTAA	57.415	29.630	0.00	0.00	0.00	1.40
165	166	9.840427	ATTAATTTTGTGATTAGGAAACTCACG	57.160	29.630	0.00	0.00	41.69	4.35
166	167	5.682943	TTTTGTGATTAGGAAACTCACGG	57.317	39.130	0.00	0.00	41.69	4.94
167	168	3.328382	TGTGATTAGGAAACTCACGGG	57.672	47.619	0.00	0.00	41.69	5.28
168	169	2.007608	GTGATTAGGAAACTCACGGGC	58.992	52.381	0.00	0.00	43.67	6.13
169	170	1.906574	TGATTAGGAAACTCACGGGCT	59.093	47.619	0.00	0.00	43.67	5.19
170	171	2.093658	TGATTAGGAAACTCACGGGCTC	60.094	50.000	0.00	0.00	43.67	4.70
171	172	1.344065	TTAGGAAACTCACGGGCTCA	58.656	50.000	0.00	0.00	43.67	4.26
172	173	1.568504	TAGGAAACTCACGGGCTCAT	58.431	50.000	0.00	0.00	43.67	2.90
173	174	0.036010	AGGAAACTCACGGGCTCATG	60.036	55.000	0.00	0.00	32.90	3.07
174	175	0.321653	GGAAACTCACGGGCTCATGT	60.322	55.000	0.00	0.00	0.00	3.21
175	176	1.523758	GAAACTCACGGGCTCATGTT	58.476	50.000	0.00	0.00	0.00	2.71
176	177	1.197721	GAAACTCACGGGCTCATGTTG	59.802	52.381	0.00	0.00	0.00	3.33
177	178	0.606401	AACTCACGGGCTCATGTTGG	60.606	55.000	0.00	0.00	0.00	3.77
178	179	2.359850	TCACGGGCTCATGTTGGC	60.360	61.111	0.00	0.00	0.00	4.52
179	180	2.672651	CACGGGCTCATGTTGGCA	60.673	61.111	14.32	0.00	0.00	4.92
180	181	2.115052	ACGGGCTCATGTTGGCAA	59.885	55.556	14.32	0.00	0.00	4.52
181	182	1.304381	ACGGGCTCATGTTGGCAAT	60.304	52.632	1.92	0.00	0.00	3.56
182	183	1.315257	ACGGGCTCATGTTGGCAATC	61.315	55.000	1.92	0.00	0.00	2.67
183	184	1.314534	CGGGCTCATGTTGGCAATCA	61.315	55.000	1.92	4.01	0.00	2.57
184	185	0.896923	GGGCTCATGTTGGCAATCAA	59.103	50.000	1.92	0.00	0.00	2.57
185	186	1.483415	GGGCTCATGTTGGCAATCAAT	59.517	47.619	1.92	0.00	37.73	2.57
186	187	2.694628	GGGCTCATGTTGGCAATCAATA	59.305	45.455	1.92	0.00	37.73	1.90
187	188	3.243636	GGGCTCATGTTGGCAATCAATAG	60.244	47.826	1.92	6.77	37.73	1.73
188	189	3.633525	GGCTCATGTTGGCAATCAATAGA	59.366	43.478	1.92	3.67	37.73	1.98
189	190	4.280174	GGCTCATGTTGGCAATCAATAGAT	59.720	41.667	1.92	0.00	37.73	1.98
190	191	5.220381	GCTCATGTTGGCAATCAATAGATG	58.780	41.667	1.92	0.00	37.73	2.90
191	192	5.221185	GCTCATGTTGGCAATCAATAGATGT	60.221	40.000	1.92	0.00	37.73	3.06
192	193	6.016860	GCTCATGTTGGCAATCAATAGATGTA	60.017	38.462	1.92	0.00	37.73	2.29
193	194	7.500720	TCATGTTGGCAATCAATAGATGTAG	57.499	36.000	1.92	0.00	37.73	2.74
194	195	7.056006	TCATGTTGGCAATCAATAGATGTAGT	58.944	34.615	1.92	0.00	37.73	2.73
195	196	7.557358	TCATGTTGGCAATCAATAGATGTAGTT	59.443	33.333	1.92	0.00	37.73	2.24
196	197	7.701539	TGTTGGCAATCAATAGATGTAGTTT	57.298	32.000	1.92	0.00	37.73	2.66
197	198	8.121305	TGTTGGCAATCAATAGATGTAGTTTT	57.879	30.769	1.92	0.00	37.73	2.43
198	199	8.584157	TGTTGGCAATCAATAGATGTAGTTTTT	58.416	29.630	1.92	0.00	37.73	1.94
235	236	8.962884	AAGACCATTTAATTTTTGTTCAGCTT	57.037	26.923	0.00	0.00	0.00	3.74
236	237	8.369218	AGACCATTTAATTTTTGTTCAGCTTG	57.631	30.769	0.00	0.00	0.00	4.01
237	238	7.986889	AGACCATTTAATTTTTGTTCAGCTTGT	59.013	29.630	0.00	0.00	0.00	3.16
238	239	9.255304	GACCATTTAATTTTTGTTCAGCTTGTA	57.745	29.630	0.00	0.00	0.00	2.41
239	240	9.606631	ACCATTTAATTTTTGTTCAGCTTGTAA	57.393	25.926	0.00	0.00	0.00	2.41
274	275	8.823220	ATTTATTTAGGTTGTGGAACTATGCT	57.177	30.769	0.00	0.00	38.04	3.79
275	276	9.914834	ATTTATTTAGGTTGTGGAACTATGCTA	57.085	29.630	0.00	0.00	38.04	3.49
276	277	9.914834	TTTATTTAGGTTGTGGAACTATGCTAT	57.085	29.630	0.00	0.00	38.04	2.97
280	281	9.914834	TTTAGGTTGTGGAACTATGCTATATTT	57.085	29.630	0.00	0.00	38.04	1.40
281	282	7.807977	AGGTTGTGGAACTATGCTATATTTG	57.192	36.000	0.00	0.00	38.04	2.32
282	283	7.346471	AGGTTGTGGAACTATGCTATATTTGT	58.654	34.615	0.00	0.00	38.04	2.83
283	284	7.499232	AGGTTGTGGAACTATGCTATATTTGTC	59.501	37.037	0.00	0.00	38.04	3.18
284	285	7.499232	GGTTGTGGAACTATGCTATATTTGTCT	59.501	37.037	0.00	0.00	38.04	3.41
285	286	8.338259	GTTGTGGAACTATGCTATATTTGTCTG	58.662	37.037	0.00	0.00	38.04	3.51
286	287	6.483307	TGTGGAACTATGCTATATTTGTCTGC	59.517	38.462	0.00	0.00	38.04	4.26
287	288	6.708054	GTGGAACTATGCTATATTTGTCTGCT	59.292	38.462	0.00	0.00	0.00	4.24
288	289	7.227512	GTGGAACTATGCTATATTTGTCTGCTT	59.772	37.037	0.00	0.00	0.00	3.91
289	290	8.428852	TGGAACTATGCTATATTTGTCTGCTTA	58.571	33.333	0.00	0.00	0.00	3.09
290	291	9.442047	GGAACTATGCTATATTTGTCTGCTTAT	57.558	33.333	0.00	0.00	0.00	1.73
296	297	8.737168	TGCTATATTTGTCTGCTTATGAAACT	57.263	30.769	0.00	0.00	0.00	2.66
297	298	9.830975	TGCTATATTTGTCTGCTTATGAAACTA	57.169	29.630	0.00	0.00	0.00	2.24
301	302	6.816134	TTTGTCTGCTTATGAAACTATGCA	57.184	33.333	0.00	0.00	32.69	3.96
302	303	6.816134	TTGTCTGCTTATGAAACTATGCAA	57.184	33.333	0.00	0.00	33.12	4.08
303	304	6.816134	TGTCTGCTTATGAAACTATGCAAA	57.184	33.333	0.00	0.00	33.12	3.68
304	305	7.213216	TGTCTGCTTATGAAACTATGCAAAA	57.787	32.000	0.00	0.00	33.12	2.44
305	306	7.829725	TGTCTGCTTATGAAACTATGCAAAAT	58.170	30.769	0.00	0.00	33.12	1.82
306	307	8.955388	TGTCTGCTTATGAAACTATGCAAAATA	58.045	29.630	0.00	0.00	33.12	1.40
307	308	9.956720	GTCTGCTTATGAAACTATGCAAAATAT	57.043	29.630	0.00	0.00	33.12	1.28
308	309	9.955208	TCTGCTTATGAAACTATGCAAAATATG	57.045	29.630	0.00	0.00	33.12	1.78
309	310	9.740239	CTGCTTATGAAACTATGCAAAATATGT	57.260	29.630	0.00	0.00	33.12	2.29
310	311	9.518906	TGCTTATGAAACTATGCAAAATATGTG	57.481	29.630	0.00	0.00	31.21	3.21
311	312	9.520204	GCTTATGAAACTATGCAAAATATGTGT	57.480	29.630	0.00	0.00	0.00	3.72
332	333	9.859427	ATGTGTATATTGGTTGAAAAATGACAG	57.141	29.630	0.00	0.00	0.00	3.51
333	334	7.812191	TGTGTATATTGGTTGAAAAATGACAGC	59.188	33.333	0.00	0.00	0.00	4.40
334	335	7.812191	GTGTATATTGGTTGAAAAATGACAGCA	59.188	33.333	0.00	0.00	0.00	4.41
335	336	8.363390	TGTATATTGGTTGAAAAATGACAGCAA	58.637	29.630	0.00	0.00	0.00	3.91
336	337	7.894376	ATATTGGTTGAAAAATGACAGCAAG	57.106	32.000	0.00	0.00	0.00	4.01
337	338	3.456280	TGGTTGAAAAATGACAGCAAGC	58.544	40.909	0.00	0.00	37.44	4.01
338	339	3.132646	TGGTTGAAAAATGACAGCAAGCT	59.867	39.130	0.00	0.00	37.71	3.74
345	346	2.047274	GACAGCAAGCTGGCCGTA	60.047	61.111	24.29	0.00	45.96	4.02
346	347	2.391389	GACAGCAAGCTGGCCGTAC	61.391	63.158	24.29	0.00	45.96	3.67
347	348	3.490759	CAGCAAGCTGGCCGTACG	61.491	66.667	10.23	8.69	40.17	3.67
348	349	4.760047	AGCAAGCTGGCCGTACGG	62.760	66.667	30.06	30.06	38.57	4.02
363	364	5.511088	CCGTACGGCAAATATGAGTTATC	57.489	43.478	23.44	0.00	0.00	1.75
364	365	4.089493	CCGTACGGCAAATATGAGTTATCG	59.911	45.833	23.44	0.00	0.00	2.92
365	366	4.432503	CGTACGGCAAATATGAGTTATCGC	60.433	45.833	7.57	0.00	0.00	4.58
366	367	2.475111	ACGGCAAATATGAGTTATCGCG	59.525	45.455	0.00	0.00	0.00	5.87
367	368	2.475111	CGGCAAATATGAGTTATCGCGT	59.525	45.455	5.77	0.00	0.00	6.01
368	369	3.059868	CGGCAAATATGAGTTATCGCGTT	60.060	43.478	5.77	0.00	0.00	4.84
369	370	4.211389	GGCAAATATGAGTTATCGCGTTG	58.789	43.478	5.77	0.00	0.00	4.10
370	371	4.211389	GCAAATATGAGTTATCGCGTTGG	58.789	43.478	5.77	0.00	0.00	3.77
371	372	4.025229	GCAAATATGAGTTATCGCGTTGGA	60.025	41.667	5.77	0.00	0.00	3.53
372	373	5.432157	CAAATATGAGTTATCGCGTTGGAC	58.568	41.667	5.77	1.62	0.00	4.02
373	374	1.556564	ATGAGTTATCGCGTTGGACG	58.443	50.000	5.77	0.00	45.88	4.79
387	388	3.960237	GACGCATTGTCGACCCAA	58.040	55.556	14.12	1.43	37.96	4.12
388	389	2.240230	GACGCATTGTCGACCCAAA	58.760	52.632	14.12	0.51	37.96	3.28
389	390	0.110373	GACGCATTGTCGACCCAAAC	60.110	55.000	14.12	0.00	37.96	2.93
390	391	0.816018	ACGCATTGTCGACCCAAACA	60.816	50.000	14.12	0.00	0.00	2.83
391	392	0.309302	CGCATTGTCGACCCAAACAA	59.691	50.000	14.12	0.00	39.52	2.83
392	393	1.268794	CGCATTGTCGACCCAAACAAA	60.269	47.619	14.12	0.00	38.74	2.83
393	394	2.606795	CGCATTGTCGACCCAAACAAAT	60.607	45.455	14.12	0.90	38.74	2.32
394	395	3.365465	CGCATTGTCGACCCAAACAAATA	60.365	43.478	14.12	0.00	38.74	1.40
395	396	4.551388	GCATTGTCGACCCAAACAAATAA	58.449	39.130	14.12	0.00	38.74	1.40
396	397	4.985409	GCATTGTCGACCCAAACAAATAAA	59.015	37.500	14.12	0.00	38.74	1.40
397	398	5.463724	GCATTGTCGACCCAAACAAATAAAA	59.536	36.000	14.12	0.00	38.74	1.52
398	399	6.018669	GCATTGTCGACCCAAACAAATAAAAA	60.019	34.615	14.12	0.00	38.74	1.94
399	400	6.889019	TTGTCGACCCAAACAAATAAAAAC	57.111	33.333	14.12	0.00	32.69	2.43
400	401	5.349809	TGTCGACCCAAACAAATAAAAACC	58.650	37.500	14.12	0.00	0.00	3.27
401	402	4.441744	GTCGACCCAAACAAATAAAAACCG	59.558	41.667	3.51	0.00	0.00	4.44
402	403	3.736759	CGACCCAAACAAATAAAAACCGG	59.263	43.478	0.00	0.00	0.00	5.28
403	404	4.499357	CGACCCAAACAAATAAAAACCGGA	60.499	41.667	9.46	0.00	0.00	5.14
404	405	4.695396	ACCCAAACAAATAAAAACCGGAC	58.305	39.130	9.46	0.00	0.00	4.79
405	406	4.161754	ACCCAAACAAATAAAAACCGGACA	59.838	37.500	9.46	0.00	0.00	4.02
406	407	5.116882	CCCAAACAAATAAAAACCGGACAA	58.883	37.500	9.46	0.00	0.00	3.18
407	408	5.585047	CCCAAACAAATAAAAACCGGACAAA	59.415	36.000	9.46	0.00	0.00	2.83
408	409	6.093633	CCCAAACAAATAAAAACCGGACAAAA	59.906	34.615	9.46	0.00	0.00	2.44
409	410	6.962116	CCAAACAAATAAAAACCGGACAAAAC	59.038	34.615	9.46	0.00	0.00	2.43
410	411	5.952698	ACAAATAAAAACCGGACAAAACG	57.047	34.783	9.46	0.00	0.00	3.60
411	412	4.268167	ACAAATAAAAACCGGACAAAACGC	59.732	37.500	9.46	0.00	0.00	4.84
412	413	3.712091	ATAAAAACCGGACAAAACGCA	57.288	38.095	9.46	0.00	0.00	5.24
413	414	1.631284	AAAAACCGGACAAAACGCAC	58.369	45.000	9.46	0.00	0.00	5.34
414	415	0.526662	AAAACCGGACAAAACGCACA	59.473	45.000	9.46	0.00	0.00	4.57
415	416	0.741915	AAACCGGACAAAACGCACAT	59.258	45.000	9.46	0.00	0.00	3.21
416	417	0.309612	AACCGGACAAAACGCACATC	59.690	50.000	9.46	0.00	0.00	3.06
417	418	1.209127	CCGGACAAAACGCACATCC	59.791	57.895	0.00	0.00	0.00	3.51
418	419	1.154488	CGGACAAAACGCACATCCG	60.154	57.895	0.00	0.00	45.61	4.18
419	420	1.837538	CGGACAAAACGCACATCCGT	61.838	55.000	2.85	0.00	45.73	4.69
430	431	0.882927	CACATCCGTTTGGTGGACGT	60.883	55.000	0.00	0.00	38.60	4.34
510	511	1.448013	GGCGCTGGTAGGAACTCAC	60.448	63.158	7.64	0.00	41.75	3.51
524	525	3.247886	GGAACTCACGAAAGAAGAACCAC	59.752	47.826	0.00	0.00	0.00	4.16
530	531	1.264288	CGAAAGAAGAACCACTGCACC	59.736	52.381	0.00	0.00	0.00	5.01
533	534	0.532862	AGAAGAACCACTGCACCGTG	60.533	55.000	0.00	0.00	34.71	4.94
534	535	0.814010	GAAGAACCACTGCACCGTGT	60.814	55.000	5.48	0.00	33.07	4.49
855	872	4.104738	CCATCTTATAAGCAGGAAGGGGAA	59.895	45.833	14.47	0.00	0.00	3.97
883	900	3.324930	CAGCCTCTGCCAGTCCCA	61.325	66.667	0.00	0.00	38.69	4.37
891	908	2.191908	GCCAGTCCCACACACACA	59.808	61.111	0.00	0.00	0.00	3.72
892	909	2.186826	GCCAGTCCCACACACACAC	61.187	63.158	0.00	0.00	0.00	3.82
893	910	1.887242	CCAGTCCCACACACACACG	60.887	63.158	0.00	0.00	0.00	4.49
894	911	2.203015	AGTCCCACACACACACGC	60.203	61.111	0.00	0.00	0.00	5.34
952	979	0.760189	GGAGAGCAGAGCAGAGGGAT	60.760	60.000	0.00	0.00	0.00	3.85
968	1006	1.723288	GGATAGGGAGGGAGGAGTTG	58.277	60.000	0.00	0.00	0.00	3.16
1140	1178	3.365265	CAGCCCCCGCACTTGTTC	61.365	66.667	0.00	0.00	37.52	3.18
1791	1829	0.036388	ACTACATGGCCACCTTCGTG	60.036	55.000	8.16	3.25	39.91	4.35
2254	2292	4.724279	ATTACTCCTCTCCTCTCCTCTC	57.276	50.000	0.00	0.00	0.00	3.20
2255	2293	1.222567	ACTCCTCTCCTCTCCTCTCC	58.777	60.000	0.00	0.00	0.00	3.71
2257	2295	1.421646	CTCCTCTCCTCTCCTCTCCTC	59.578	61.905	0.00	0.00	0.00	3.71
2258	2296	0.478507	CCTCTCCTCTCCTCTCCTCC	59.521	65.000	0.00	0.00	0.00	4.30
2261	2299	3.053077	CTCTCCTCTCCTCTCCTCCTTA	58.947	54.545	0.00	0.00	0.00	2.69
2288	2331	5.693769	TTTATAAGGAGAGGACACCTTGG	57.306	43.478	0.00	0.00	44.41	3.61
2327	2370	3.513680	TGCATTGATGGATTCTTGTGC	57.486	42.857	0.00	0.00	0.00	4.57
2615	2658	0.109412	GGAAGAGTACGGTGGTGTCG	60.109	60.000	0.00	0.00	0.00	4.35
2670	2713	4.747605	GTCTGACTGACTCTCAAGTTTTCC	59.252	45.833	0.00	0.00	42.21	3.13
2671	2714	4.061596	CTGACTGACTCTCAAGTTTTCCC	58.938	47.826	0.00	0.00	35.28	3.97
2672	2715	3.711704	TGACTGACTCTCAAGTTTTCCCT	59.288	43.478	0.00	0.00	35.28	4.20
2673	2716	4.164221	TGACTGACTCTCAAGTTTTCCCTT	59.836	41.667	0.00	0.00	35.28	3.95
2674	2717	4.455606	ACTGACTCTCAAGTTTTCCCTTG	58.544	43.478	0.00	0.00	42.57	3.61
2675	2718	4.080299	ACTGACTCTCAAGTTTTCCCTTGT	60.080	41.667	0.00	0.00	42.01	3.16
2676	2719	4.451900	TGACTCTCAAGTTTTCCCTTGTC	58.548	43.478	0.00	0.00	42.01	3.18
2687	2730	4.785511	TTTCCCTTGTCTCTTACTCGAG	57.214	45.455	11.84	11.84	0.00	4.04
2964	3016	4.415332	ACGGCTACGACACGCAGG	62.415	66.667	0.00	0.00	44.60	4.85
2965	3017	4.415332	CGGCTACGACACGCAGGT	62.415	66.667	0.00	0.00	44.60	4.00
2966	3018	2.506438	GGCTACGACACGCAGGTC	60.506	66.667	0.00	0.00	34.42	3.85
2967	3019	2.506438	GCTACGACACGCAGGTCC	60.506	66.667	0.00	0.00	34.24	4.46
3003	3055	2.172505	TGGTCACTCCGGCAATCATATT	59.827	45.455	0.00	0.00	39.52	1.28
3005	3057	3.997021	GGTCACTCCGGCAATCATATTAG	59.003	47.826	0.00	0.00	0.00	1.73
3009	3061	6.091441	GTCACTCCGGCAATCATATTAGATTC	59.909	42.308	0.00	0.00	36.13	2.52
3010	3062	5.934043	CACTCCGGCAATCATATTAGATTCA	59.066	40.000	0.00	0.00	36.13	2.57
3011	3063	6.596888	CACTCCGGCAATCATATTAGATTCAT	59.403	38.462	0.00	0.00	36.13	2.57
3012	3064	6.820656	ACTCCGGCAATCATATTAGATTCATC	59.179	38.462	0.00	0.00	36.13	2.92
3106	3187	2.028112	GCCCTTTCCACCATCCTTTTTC	60.028	50.000	0.00	0.00	0.00	2.29
3153	3234	1.550130	CCCTTTGCCGTGGAGGAGTA	61.550	60.000	0.00	0.00	45.00	2.59
3307	3614	6.113411	ACTAGTGCAATACTATTTCACCACC	58.887	40.000	7.66	0.00	40.94	4.61
3347	3659	7.492344	AGAAGAAGCAATTGTTTGTTTGTTAGG	59.508	33.333	16.59	0.00	38.86	2.69
3348	3660	6.872920	AGAAGCAATTGTTTGTTTGTTAGGA	58.127	32.000	12.62	0.00	36.54	2.94
3349	3661	6.980397	AGAAGCAATTGTTTGTTTGTTAGGAG	59.020	34.615	12.62	0.00	36.54	3.69
3350	3662	5.049828	AGCAATTGTTTGTTTGTTAGGAGC	58.950	37.500	7.40	0.00	35.17	4.70
3352	3664	5.466393	GCAATTGTTTGTTTGTTAGGAGCAT	59.534	36.000	7.40	0.00	35.17	3.79
3353	3665	6.564499	GCAATTGTTTGTTTGTTAGGAGCATG	60.564	38.462	7.40	0.00	35.17	4.06
3354	3666	5.590530	TTGTTTGTTTGTTAGGAGCATGT	57.409	34.783	0.00	0.00	0.00	3.21
3355	3667	5.590530	TGTTTGTTTGTTAGGAGCATGTT	57.409	34.783	0.00	0.00	0.00	2.71
3356	3668	5.347342	TGTTTGTTTGTTAGGAGCATGTTG	58.653	37.500	0.00	0.00	0.00	3.33
3357	3669	3.641437	TGTTTGTTAGGAGCATGTTGC	57.359	42.857	0.00	0.00	45.46	4.17
3442	4017	2.490903	ACAGTTAGTACGTACCTGCCTG	59.509	50.000	21.80	21.42	0.00	4.85
3443	4018	1.475682	AGTTAGTACGTACCTGCCTGC	59.524	52.381	21.80	6.09	0.00	4.85
3444	4019	0.819582	TTAGTACGTACCTGCCTGCC	59.180	55.000	21.80	0.00	0.00	4.85
3445	4020	0.033796	TAGTACGTACCTGCCTGCCT	60.034	55.000	21.80	2.94	0.00	4.75
3465	4040	1.039785	GCCTGCCTCCTCCATTTTCC	61.040	60.000	0.00	0.00	0.00	3.13
3486	4061	2.256117	AAAGTCCCTTTCTCACCACG	57.744	50.000	0.00	0.00	0.00	4.94
3509	4091	0.309922	CACAACACAAGCAGCTGAGG	59.690	55.000	20.43	8.08	0.00	3.86
3510	4092	0.820891	ACAACACAAGCAGCTGAGGG	60.821	55.000	20.43	10.05	0.00	4.30
3700	4555	3.492353	AGTGGCAGTGGCAGTGGT	61.492	61.111	24.96	5.65	40.26	4.16
3710	4565	0.534877	TGGCAGTGGTACAGCACTTG	60.535	55.000	11.21	8.49	41.80	3.16
3917	4963	2.460669	GCCTCCAGTCAAAATTCCCAT	58.539	47.619	0.00	0.00	0.00	4.00
3924	4970	7.328277	TCCAGTCAAAATTCCCATATAAACG	57.672	36.000	0.00	0.00	0.00	3.60
3926	4972	7.066525	TCCAGTCAAAATTCCCATATAAACGAC	59.933	37.037	0.00	0.00	0.00	4.34
3927	4973	7.067008	CCAGTCAAAATTCCCATATAAACGACT	59.933	37.037	0.00	0.00	0.00	4.18
3928	4974	8.122952	CAGTCAAAATTCCCATATAAACGACTC	58.877	37.037	0.00	0.00	0.00	3.36
3929	4975	8.047310	AGTCAAAATTCCCATATAAACGACTCT	58.953	33.333	0.00	0.00	0.00	3.24
3931	4977	9.542462	TCAAAATTCCCATATAAACGACTCTAG	57.458	33.333	0.00	0.00	0.00	2.43
3933	4979	9.765795	AAAATTCCCATATAAACGACTCTAGAG	57.234	33.333	18.49	18.49	0.00	2.43
4518	5586	2.513259	GCATGGGCATGGGAATGGG	61.513	63.158	0.00	0.00	40.72	4.00
4519	5587	1.233659	CATGGGCATGGGAATGGGA	59.766	57.895	0.00	0.00	35.24	4.37
4520	5588	0.398806	CATGGGCATGGGAATGGGAA	60.399	55.000	0.00	0.00	35.24	3.97
4521	5589	0.569204	ATGGGCATGGGAATGGGAAT	59.431	50.000	0.00	0.00	0.00	3.01
4522	5590	0.398806	TGGGCATGGGAATGGGAATG	60.399	55.000	0.00	0.00	0.00	2.67
4523	5591	1.123246	GGGCATGGGAATGGGAATGG	61.123	60.000	0.00	0.00	0.00	3.16
4531	5599	2.305009	GGAATGGGAATGGAGAAGCTG	58.695	52.381	0.00	0.00	0.00	4.24
5002	6070	3.989595	GCGCTTATGCTCGTCGCC	61.990	66.667	0.00	0.00	39.91	5.54
5869	6937	2.514013	CGACAACATCGCCTACGGC	61.514	63.158	0.00	0.00	45.52	5.68
6494	7588	3.119849	GCCAATGCCATGATCCGTATTAC	60.120	47.826	0.00	0.00	0.00	1.89
6495	7589	4.071423	CCAATGCCATGATCCGTATTACA	58.929	43.478	0.00	0.00	0.00	2.41
6539	7633	4.308458	CCACTTGTCCGCGGACCA	62.308	66.667	45.59	37.20	43.97	4.02
6641	7747	5.964958	TTTCTCCTCTTGGCACTTTATTG	57.035	39.130	0.00	0.00	0.00	1.90
6642	7748	3.347216	TCTCCTCTTGGCACTTTATTGC	58.653	45.455	0.00	0.00	42.18	3.56
6647	7758	4.498682	CCTCTTGGCACTTTATTGCATAGC	60.499	45.833	0.00	0.00	44.94	2.97
6760	10438	2.961741	TGTGCCAAGTTATTTGCTTCCA	59.038	40.909	0.00	0.00	35.37	3.53
6770	10448	5.127682	AGTTATTTGCTTCCATGGGTCAATC	59.872	40.000	13.02	0.00	0.00	2.67
6786	10464	5.434408	GGTCAATCCCTAAAGTAAATCGGT	58.566	41.667	0.00	0.00	0.00	4.69
6787	10465	5.296035	GGTCAATCCCTAAAGTAAATCGGTG	59.704	44.000	0.00	0.00	0.00	4.94
6788	10466	6.110707	GTCAATCCCTAAAGTAAATCGGTGA	58.889	40.000	0.00	0.00	0.00	4.02
6789	10467	6.036844	GTCAATCCCTAAAGTAAATCGGTGAC	59.963	42.308	0.00	0.00	0.00	3.67
6790	10468	5.687166	ATCCCTAAAGTAAATCGGTGACA	57.313	39.130	0.00	0.00	0.00	3.58
6791	10469	5.687166	TCCCTAAAGTAAATCGGTGACAT	57.313	39.130	0.00	0.00	0.00	3.06
6792	10470	6.057321	TCCCTAAAGTAAATCGGTGACATT	57.943	37.500	0.00	0.00	0.00	2.71
6793	10471	6.478129	TCCCTAAAGTAAATCGGTGACATTT	58.522	36.000	0.00	0.00	0.00	2.32
6794	10472	6.596497	TCCCTAAAGTAAATCGGTGACATTTC	59.404	38.462	0.00	0.00	0.00	2.17
6795	10473	6.373216	CCCTAAAGTAAATCGGTGACATTTCA	59.627	38.462	0.00	0.00	0.00	2.69
6796	10474	7.067008	CCCTAAAGTAAATCGGTGACATTTCAT	59.933	37.037	0.00	0.00	33.11	2.57
6797	10475	8.458843	CCTAAAGTAAATCGGTGACATTTCATT	58.541	33.333	0.00	0.00	33.11	2.57
6798	10476	9.840427	CTAAAGTAAATCGGTGACATTTCATTT	57.160	29.630	0.00	0.00	33.11	2.32
6800	10478	9.541143	AAAGTAAATCGGTGACATTTCATTTTT	57.459	25.926	0.00	0.00	33.11	1.94
6816	10494	3.569873	TTTTTCGATGAGAGGGGCC	57.430	52.632	0.00	0.00	0.00	5.80
6817	10495	0.695924	TTTTTCGATGAGAGGGGCCA	59.304	50.000	4.39	0.00	0.00	5.36
6818	10496	0.035439	TTTTCGATGAGAGGGGCCAC	60.035	55.000	4.39	0.00	0.00	5.01
6819	10497	1.198094	TTTCGATGAGAGGGGCCACA	61.198	55.000	8.31	0.00	0.00	4.17
6820	10498	0.982852	TTCGATGAGAGGGGCCACAT	60.983	55.000	8.31	5.12	0.00	3.21
6821	10499	1.227764	CGATGAGAGGGGCCACATG	60.228	63.158	8.31	0.00	0.00	3.21
6822	10500	1.527844	GATGAGAGGGGCCACATGC	60.528	63.158	8.31	0.00	40.16	4.06
6831	10509	3.402477	GCCACATGCCCCCATTTT	58.598	55.556	0.00	0.00	0.00	1.82
6832	10510	1.221566	GCCACATGCCCCCATTTTC	59.778	57.895	0.00	0.00	0.00	2.29
6872	10550	3.544684	AGCATACTGAAATCAATCCGCA	58.455	40.909	0.00	0.00	0.00	5.69
6873	10551	4.139786	AGCATACTGAAATCAATCCGCAT	58.860	39.130	0.00	0.00	0.00	4.73
6874	10552	4.023450	AGCATACTGAAATCAATCCGCATG	60.023	41.667	0.00	0.00	0.00	4.06
6875	10553	4.023792	GCATACTGAAATCAATCCGCATGA	60.024	41.667	0.00	0.00	0.00	3.07
6876	10554	5.686834	CATACTGAAATCAATCCGCATGAG	58.313	41.667	0.00	0.00	0.00	2.90
6877	10555	2.357009	ACTGAAATCAATCCGCATGAGC	59.643	45.455	0.00	0.00	37.42	4.26
6878	10556	2.356695	CTGAAATCAATCCGCATGAGCA	59.643	45.455	0.00	0.00	42.27	4.26
6879	10557	2.953648	TGAAATCAATCCGCATGAGCAT	59.046	40.909	0.00	0.00	42.27	3.79
6880	10558	4.136051	TGAAATCAATCCGCATGAGCATA	58.864	39.130	0.00	0.00	42.27	3.14
6881	10559	4.023792	TGAAATCAATCCGCATGAGCATAC	60.024	41.667	0.00	0.00	42.27	2.39
6882	10560	2.916702	TCAATCCGCATGAGCATACT	57.083	45.000	0.00	0.00	42.27	2.12
6883	10561	2.486918	TCAATCCGCATGAGCATACTG	58.513	47.619	0.00	0.00	42.27	2.74
6884	10562	2.102925	TCAATCCGCATGAGCATACTGA	59.897	45.455	0.00	0.00	42.27	3.41
6885	10563	2.874086	CAATCCGCATGAGCATACTGAA	59.126	45.455	0.00	0.00	42.27	3.02
6886	10564	2.689553	TCCGCATGAGCATACTGAAA	57.310	45.000	0.00	0.00	42.27	2.69
6887	10565	3.198409	TCCGCATGAGCATACTGAAAT	57.802	42.857	0.00	0.00	42.27	2.17
6888	10566	3.133691	TCCGCATGAGCATACTGAAATC	58.866	45.455	0.00	0.00	42.27	2.17
6889	10567	2.874086	CCGCATGAGCATACTGAAATCA	59.126	45.455	0.00	0.00	42.27	2.57
6890	10568	3.313249	CCGCATGAGCATACTGAAATCAA	59.687	43.478	0.00	0.00	42.27	2.57
6891	10569	4.023450	CCGCATGAGCATACTGAAATCAAT	60.023	41.667	0.00	0.00	42.27	2.57
6892	10570	5.145059	CGCATGAGCATACTGAAATCAATC	58.855	41.667	0.00	0.00	42.27	2.67
6893	10571	5.458891	GCATGAGCATACTGAAATCAATCC	58.541	41.667	0.00	0.00	41.58	3.01
6894	10572	5.686834	CATGAGCATACTGAAATCAATCCG	58.313	41.667	0.00	0.00	0.00	4.18
6895	10573	3.561310	TGAGCATACTGAAATCAATCCGC	59.439	43.478	0.00	0.00	0.00	5.54
6901	10579	0.682855	TGAAATCAATCCGCCCCCAC	60.683	55.000	0.00	0.00	0.00	4.61
6966	10644	2.223294	GCATTGATGAGCTCAAGACAGC	60.223	50.000	22.50	17.92	46.71	4.40
6977	10655	1.081892	CAAGACAGCCAGATTCCACG	58.918	55.000	0.00	0.00	0.00	4.94
7011	10689	6.500589	AGCACCCAATATCACATACTAACT	57.499	37.500	0.00	0.00	0.00	2.24
7012	10690	7.523216	CGAGCACCCAATATCACATACTAACTA	60.523	40.741	0.00	0.00	0.00	2.24
7020	10698	9.915629	CAATATCACATACTAACTAAGTCCTCC	57.084	37.037	0.00	0.00	39.80	4.30
7021	10699	9.656323	AATATCACATACTAACTAAGTCCTCCA	57.344	33.333	0.00	0.00	39.80	3.86
7035	10713	1.839994	TCCTCCACAAAGAGCCATAGG	59.160	52.381	0.00	0.00	32.17	2.57
7042	10720	1.667724	CAAAGAGCCATAGGTTCAGCG	59.332	52.381	2.77	0.00	35.33	5.18
7073	10751	4.178540	TCCGTAACATGATCGAAAGGTTC	58.821	43.478	0.00	0.00	0.00	3.62
7075	10753	4.390603	CCGTAACATGATCGAAAGGTTCAA	59.609	41.667	0.00	0.00	0.00	2.69
7077	10755	6.403200	CCGTAACATGATCGAAAGGTTCAATT	60.403	38.462	0.00	0.00	0.00	2.32
7082	10760	8.154649	ACATGATCGAAAGGTTCAATTATACC	57.845	34.615	0.00	0.87	34.54	2.73
7083	10761	7.773224	ACATGATCGAAAGGTTCAATTATACCA	59.227	33.333	0.00	0.00	36.87	3.25
7099	10777	2.801631	CCAGAGATCGCCTCCCCAC	61.802	68.421	0.00	0.00	42.97	4.61
7125	10803	7.805071	CGGCTATTTTGAAGGACATCAATAATC	59.195	37.037	0.00	0.00	38.98	1.75
7203	10881	3.647771	GGTTTCTCCCAGCCCGGT	61.648	66.667	0.00	0.00	0.00	5.28
7210	10888	0.254747	CTCCCAGCCCGGTTTATTCA	59.745	55.000	0.00	0.00	0.00	2.57
7222	10900	3.751175	CGGTTTATTCACCTGCTCTTGAA	59.249	43.478	0.00	0.00	36.21	2.69
7247	10925	6.041979	AGGTTCTTCTTTGCATAATTGGTTGT	59.958	34.615	0.00	0.00	0.00	3.32
7297	10975	4.853924	AAAGGAGGTTTAACATGCACAG	57.146	40.909	3.93	0.00	0.00	3.66
7304	10982	2.558359	GTTTAACATGCACAGCCTTCCT	59.442	45.455	0.00	0.00	0.00	3.36
7319	10997	3.855858	CCTTCCTAGCTTCTCTGTGTTC	58.144	50.000	0.00	0.00	0.00	3.18
7322	11000	5.486526	CTTCCTAGCTTCTCTGTGTTCAAT	58.513	41.667	0.00	0.00	0.00	2.57
7346	11024	4.685628	CCAAATGTACCAAGATGCAACAAC	59.314	41.667	0.00	0.00	0.00	3.32

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
0	1	0.325933	CAAGCAGTCATCACCTCCCA	59.674	55.000	0.00	0.00	0.00	4.37
1	2	0.326264	ACAAGCAGTCATCACCTCCC	59.674	55.000	0.00	0.00	0.00	4.30
2	3	1.271054	ACACAAGCAGTCATCACCTCC	60.271	52.381	0.00	0.00	0.00	4.30
3	4	1.802960	CACACAAGCAGTCATCACCTC	59.197	52.381	0.00	0.00	0.00	3.85
4	5	1.417517	TCACACAAGCAGTCATCACCT	59.582	47.619	0.00	0.00	0.00	4.00
5	6	1.882912	TCACACAAGCAGTCATCACC	58.117	50.000	0.00	0.00	0.00	4.02
6	7	3.069289	TGATCACACAAGCAGTCATCAC	58.931	45.455	0.00	0.00	0.00	3.06
7	8	3.405823	TGATCACACAAGCAGTCATCA	57.594	42.857	0.00	0.00	0.00	3.07
8	9	3.937079	TCATGATCACACAAGCAGTCATC	59.063	43.478	0.00	0.00	0.00	2.92
9	10	3.946606	TCATGATCACACAAGCAGTCAT	58.053	40.909	0.00	0.00	0.00	3.06
10	11	3.405823	TCATGATCACACAAGCAGTCA	57.594	42.857	0.00	0.00	0.00	3.41
11	12	4.393990	TCATTCATGATCACACAAGCAGTC	59.606	41.667	0.00	0.00	0.00	3.51
12	13	4.329392	TCATTCATGATCACACAAGCAGT	58.671	39.130	0.00	0.00	0.00	4.40
13	14	4.730903	GCTCATTCATGATCACACAAGCAG	60.731	45.833	0.00	0.00	36.02	4.24
14	15	3.128068	GCTCATTCATGATCACACAAGCA	59.872	43.478	0.00	0.00	36.02	3.91
15	16	3.377485	AGCTCATTCATGATCACACAAGC	59.623	43.478	0.00	3.07	36.02	4.01
16	17	4.035324	GGAGCTCATTCATGATCACACAAG	59.965	45.833	17.19	0.00	36.02	3.16
17	18	3.943381	GGAGCTCATTCATGATCACACAA	59.057	43.478	17.19	0.00	36.02	3.33
18	19	3.538591	GGAGCTCATTCATGATCACACA	58.461	45.455	17.19	0.00	36.02	3.72
19	20	2.877168	GGGAGCTCATTCATGATCACAC	59.123	50.000	17.19	0.00	36.02	3.82
20	21	2.484241	CGGGAGCTCATTCATGATCACA	60.484	50.000	17.19	0.00	36.02	3.58
21	22	2.141517	CGGGAGCTCATTCATGATCAC	58.858	52.381	17.19	0.00	36.02	3.06
22	23	2.041701	TCGGGAGCTCATTCATGATCA	58.958	47.619	17.19	0.00	36.02	2.92
23	24	2.827800	TCGGGAGCTCATTCATGATC	57.172	50.000	17.19	0.00	36.02	2.92
24	25	3.209410	GTTTCGGGAGCTCATTCATGAT	58.791	45.455	17.19	0.00	36.02	2.45
25	26	2.632377	GTTTCGGGAGCTCATTCATGA	58.368	47.619	17.19	0.00	35.16	3.07
26	27	1.328680	CGTTTCGGGAGCTCATTCATG	59.671	52.381	17.19	0.00	0.00	3.07
27	28	1.066143	ACGTTTCGGGAGCTCATTCAT	60.066	47.619	17.19	0.00	0.00	2.57
28	29	0.320374	ACGTTTCGGGAGCTCATTCA	59.680	50.000	17.19	0.00	0.00	2.57
29	30	2.288961	TACGTTTCGGGAGCTCATTC	57.711	50.000	17.19	3.46	0.00	2.67
30	31	2.431057	AGATACGTTTCGGGAGCTCATT	59.569	45.455	17.19	0.00	0.00	2.57
31	32	2.032620	AGATACGTTTCGGGAGCTCAT	58.967	47.619	17.19	0.00	0.00	2.90
32	33	1.471119	AGATACGTTTCGGGAGCTCA	58.529	50.000	17.19	0.00	0.00	4.26
33	34	2.601741	CGTAGATACGTTTCGGGAGCTC	60.602	54.545	4.71	4.71	44.13	4.09
34	35	1.332997	CGTAGATACGTTTCGGGAGCT	59.667	52.381	0.00	0.00	44.13	4.09
35	36	1.751552	CGTAGATACGTTTCGGGAGC	58.248	55.000	0.00	0.00	44.13	4.70
46	47	5.903810	ACTGAAACCCTTGATCGTAGATAC	58.096	41.667	0.00	0.00	45.12	2.24
47	48	6.406624	GGAACTGAAACCCTTGATCGTAGATA	60.407	42.308	0.00	0.00	45.12	1.98
48	49	5.420409	GAACTGAAACCCTTGATCGTAGAT	58.580	41.667	0.00	0.00	45.12	1.98
49	50	4.322499	GGAACTGAAACCCTTGATCGTAGA	60.322	45.833	0.00	0.00	45.75	2.59
50	51	3.933332	GGAACTGAAACCCTTGATCGTAG	59.067	47.826	0.00	0.00	0.00	3.51
51	52	3.325425	TGGAACTGAAACCCTTGATCGTA	59.675	43.478	0.00	0.00	0.00	3.43
52	53	2.105821	TGGAACTGAAACCCTTGATCGT	59.894	45.455	0.00	0.00	0.00	3.73
53	54	2.744202	CTGGAACTGAAACCCTTGATCG	59.256	50.000	0.00	0.00	0.00	3.69
54	55	3.084786	CCTGGAACTGAAACCCTTGATC	58.915	50.000	0.00	0.00	0.00	2.92
55	56	2.225117	CCCTGGAACTGAAACCCTTGAT	60.225	50.000	0.00	0.00	0.00	2.57
56	57	1.144913	CCCTGGAACTGAAACCCTTGA	59.855	52.381	0.00	0.00	0.00	3.02
57	58	1.133482	ACCCTGGAACTGAAACCCTTG	60.133	52.381	0.00	0.00	0.00	3.61
58	59	1.133482	CACCCTGGAACTGAAACCCTT	60.133	52.381	0.00	0.00	0.00	3.95
59	60	0.478507	CACCCTGGAACTGAAACCCT	59.521	55.000	0.00	0.00	0.00	4.34
60	61	0.476771	TCACCCTGGAACTGAAACCC	59.523	55.000	0.00	0.00	0.00	4.11
61	62	1.133915	TGTCACCCTGGAACTGAAACC	60.134	52.381	0.00	0.00	0.00	3.27
62	63	2.341846	TGTCACCCTGGAACTGAAAC	57.658	50.000	0.00	0.00	0.00	2.78
63	64	3.221771	CATTGTCACCCTGGAACTGAAA	58.778	45.455	0.00	0.00	0.00	2.69
64	65	2.174639	ACATTGTCACCCTGGAACTGAA	59.825	45.455	0.00	0.00	0.00	3.02
65	66	1.774254	ACATTGTCACCCTGGAACTGA	59.226	47.619	0.00	0.00	0.00	3.41
66	67	2.276732	ACATTGTCACCCTGGAACTG	57.723	50.000	0.00	0.00	0.00	3.16
67	68	2.091885	ACAACATTGTCACCCTGGAACT	60.092	45.455	0.00	0.00	36.50	3.01
68	69	2.034558	CACAACATTGTCACCCTGGAAC	59.965	50.000	0.00	0.00	39.91	3.62
69	70	2.305928	CACAACATTGTCACCCTGGAA	58.694	47.619	0.00	0.00	39.91	3.53
70	71	1.979855	CACAACATTGTCACCCTGGA	58.020	50.000	0.00	0.00	39.91	3.86
71	72	0.314935	GCACAACATTGTCACCCTGG	59.685	55.000	0.00	0.00	39.91	4.45
72	73	0.314935	GGCACAACATTGTCACCCTG	59.685	55.000	0.00	0.00	39.91	4.45
73	74	0.185901	AGGCACAACATTGTCACCCT	59.814	50.000	8.92	6.17	39.91	4.34
74	75	0.314935	CAGGCACAACATTGTCACCC	59.685	55.000	8.92	4.37	39.91	4.61
75	76	1.267806	CTCAGGCACAACATTGTCACC	59.732	52.381	0.00	0.02	39.91	4.02
76	77	1.335324	GCTCAGGCACAACATTGTCAC	60.335	52.381	0.00	0.00	39.91	3.67
77	78	0.953727	GCTCAGGCACAACATTGTCA	59.046	50.000	0.00	0.00	39.91	3.58
78	79	0.953727	TGCTCAGGCACAACATTGTC	59.046	50.000	0.00	0.00	44.28	3.18
79	80	3.114527	TGCTCAGGCACAACATTGT	57.885	47.368	0.00	0.00	44.28	2.71
89	90	2.203181	GCTCCTCCATGCTCAGGC	60.203	66.667	0.00	0.00	39.26	4.85
90	91	2.108566	CGCTCCTCCATGCTCAGG	59.891	66.667	0.00	0.00	0.00	3.86
91	92	2.108566	CCGCTCCTCCATGCTCAG	59.891	66.667	0.00	0.00	0.00	3.35
92	93	4.166888	GCCGCTCCTCCATGCTCA	62.167	66.667	0.00	0.00	0.00	4.26
93	94	3.687321	TTGCCGCTCCTCCATGCTC	62.687	63.158	0.00	0.00	0.00	4.26
94	95	3.720601	TTGCCGCTCCTCCATGCT	61.721	61.111	0.00	0.00	0.00	3.79
95	96	3.512516	GTTGCCGCTCCTCCATGC	61.513	66.667	0.00	0.00	0.00	4.06
96	97	3.197790	CGTTGCCGCTCCTCCATG	61.198	66.667	0.00	0.00	0.00	3.66
97	98	2.748058	AAACGTTGCCGCTCCTCCAT	62.748	55.000	0.00	0.00	37.70	3.41
98	99	3.469863	AAACGTTGCCGCTCCTCCA	62.470	57.895	0.00	0.00	37.70	3.86
99	100	2.668550	AAACGTTGCCGCTCCTCC	60.669	61.111	0.00	0.00	37.70	4.30
100	101	2.556287	CAAACGTTGCCGCTCCTC	59.444	61.111	0.00	0.00	37.70	3.71
109	110	3.958704	TGGATAAACTGTGCAAACGTTG	58.041	40.909	0.00	0.00	0.00	4.10
110	111	4.640789	TTGGATAAACTGTGCAAACGTT	57.359	36.364	0.00	0.00	0.00	3.99
111	112	4.846779	ATTGGATAAACTGTGCAAACGT	57.153	36.364	0.00	0.00	30.70	3.99
112	113	5.689514	TGAAATTGGATAAACTGTGCAAACG	59.310	36.000	0.00	0.00	30.70	3.60
113	114	7.384660	TGATGAAATTGGATAAACTGTGCAAAC	59.615	33.333	0.00	0.00	30.70	2.93
114	115	7.440198	TGATGAAATTGGATAAACTGTGCAAA	58.560	30.769	0.00	0.00	30.70	3.68
115	116	6.990798	TGATGAAATTGGATAAACTGTGCAA	58.009	32.000	0.00	0.00	0.00	4.08
116	117	6.587206	TGATGAAATTGGATAAACTGTGCA	57.413	33.333	0.00	0.00	0.00	4.57
117	118	9.585099	TTAATGATGAAATTGGATAAACTGTGC	57.415	29.630	0.00	0.00	0.00	4.57
139	140	9.840427	CGTGAGTTTCCTAATCACAAAATTAAT	57.160	29.630	6.24	0.00	42.76	1.40
140	141	8.293867	CCGTGAGTTTCCTAATCACAAAATTAA	58.706	33.333	6.24	0.00	42.76	1.40
141	142	7.094549	CCCGTGAGTTTCCTAATCACAAAATTA	60.095	37.037	6.24	0.00	42.76	1.40
142	143	6.294508	CCCGTGAGTTTCCTAATCACAAAATT	60.295	38.462	6.24	0.00	42.76	1.82
143	144	5.183140	CCCGTGAGTTTCCTAATCACAAAAT	59.817	40.000	6.24	0.00	42.76	1.82
144	145	4.517453	CCCGTGAGTTTCCTAATCACAAAA	59.483	41.667	6.24	0.00	42.76	2.44
145	146	4.069304	CCCGTGAGTTTCCTAATCACAAA	58.931	43.478	6.24	0.00	42.76	2.83
146	147	3.670625	CCCGTGAGTTTCCTAATCACAA	58.329	45.455	6.24	0.00	42.76	3.33
147	148	2.614481	GCCCGTGAGTTTCCTAATCACA	60.614	50.000	6.24	0.00	42.76	3.58
148	149	2.007608	GCCCGTGAGTTTCCTAATCAC	58.992	52.381	0.00	0.00	39.93	3.06
149	150	1.906574	AGCCCGTGAGTTTCCTAATCA	59.093	47.619	0.00	0.00	0.00	2.57
150	151	2.093658	TGAGCCCGTGAGTTTCCTAATC	60.094	50.000	0.00	0.00	0.00	1.75
151	152	1.906574	TGAGCCCGTGAGTTTCCTAAT	59.093	47.619	0.00	0.00	0.00	1.73
152	153	1.344065	TGAGCCCGTGAGTTTCCTAA	58.656	50.000	0.00	0.00	0.00	2.69
153	154	1.207089	CATGAGCCCGTGAGTTTCCTA	59.793	52.381	0.00	0.00	0.00	2.94
154	155	0.036010	CATGAGCCCGTGAGTTTCCT	60.036	55.000	0.00	0.00	0.00	3.36
155	156	0.321653	ACATGAGCCCGTGAGTTTCC	60.322	55.000	0.00	0.00	33.58	3.13
156	157	1.197721	CAACATGAGCCCGTGAGTTTC	59.802	52.381	0.00	0.00	33.58	2.78
157	158	1.238439	CAACATGAGCCCGTGAGTTT	58.762	50.000	0.00	0.00	33.58	2.66
158	159	0.606401	CCAACATGAGCCCGTGAGTT	60.606	55.000	0.00	0.00	33.58	3.01
159	160	1.003355	CCAACATGAGCCCGTGAGT	60.003	57.895	0.00	0.00	33.58	3.41
160	161	2.401766	GCCAACATGAGCCCGTGAG	61.402	63.158	0.00	0.00	33.58	3.51
161	162	2.359850	GCCAACATGAGCCCGTGA	60.360	61.111	0.00	0.00	33.58	4.35
162	163	1.597797	ATTGCCAACATGAGCCCGTG	61.598	55.000	0.00	0.00	35.46	4.94
163	164	1.304381	ATTGCCAACATGAGCCCGT	60.304	52.632	0.00	0.00	0.00	5.28
164	165	1.314534	TGATTGCCAACATGAGCCCG	61.315	55.000	0.00	0.00	0.00	6.13
165	166	0.896923	TTGATTGCCAACATGAGCCC	59.103	50.000	0.00	0.00	0.00	5.19
166	167	2.973694	ATTGATTGCCAACATGAGCC	57.026	45.000	0.00	0.00	37.63	4.70
167	168	4.906065	TCTATTGATTGCCAACATGAGC	57.094	40.909	0.00	0.00	37.63	4.26
168	169	6.387041	ACATCTATTGATTGCCAACATGAG	57.613	37.500	0.00	0.00	37.63	2.90
169	170	7.056006	ACTACATCTATTGATTGCCAACATGA	58.944	34.615	0.00	0.00	37.63	3.07
170	171	7.268199	ACTACATCTATTGATTGCCAACATG	57.732	36.000	0.00	0.00	37.63	3.21
171	172	7.886629	AACTACATCTATTGATTGCCAACAT	57.113	32.000	0.00	0.00	37.63	2.71
172	173	7.701539	AAACTACATCTATTGATTGCCAACA	57.298	32.000	0.00	0.00	37.63	3.33
173	174	8.986477	AAAAACTACATCTATTGATTGCCAAC	57.014	30.769	0.00	0.00	37.63	3.77
210	211	8.829612	CAAGCTGAACAAAAATTAAATGGTCTT	58.170	29.630	0.00	0.00	32.03	3.01
211	212	7.986889	ACAAGCTGAACAAAAATTAAATGGTCT	59.013	29.630	0.00	0.00	32.03	3.85
212	213	8.141835	ACAAGCTGAACAAAAATTAAATGGTC	57.858	30.769	0.00	0.00	0.00	4.02
213	214	9.606631	TTACAAGCTGAACAAAAATTAAATGGT	57.393	25.926	0.00	0.00	0.00	3.55
248	249	9.914834	AGCATAGTTCCACAACCTAAATAAATA	57.085	29.630	0.00	0.00	32.22	1.40
249	250	8.823220	AGCATAGTTCCACAACCTAAATAAAT	57.177	30.769	0.00	0.00	32.22	1.40
250	251	9.914834	ATAGCATAGTTCCACAACCTAAATAAA	57.085	29.630	0.00	0.00	32.22	1.40
254	255	9.914834	AAATATAGCATAGTTCCACAACCTAAA	57.085	29.630	0.00	0.00	32.22	1.85
255	256	9.337396	CAAATATAGCATAGTTCCACAACCTAA	57.663	33.333	0.00	0.00	32.22	2.69
256	257	8.491134	ACAAATATAGCATAGTTCCACAACCTA	58.509	33.333	0.00	0.00	32.22	3.08
257	258	7.346471	ACAAATATAGCATAGTTCCACAACCT	58.654	34.615	0.00	0.00	32.22	3.50
258	259	7.499232	AGACAAATATAGCATAGTTCCACAACC	59.501	37.037	0.00	0.00	32.22	3.77
259	260	8.338259	CAGACAAATATAGCATAGTTCCACAAC	58.662	37.037	0.00	0.00	0.00	3.32
260	261	7.012327	GCAGACAAATATAGCATAGTTCCACAA	59.988	37.037	0.00	0.00	0.00	3.33
261	262	6.483307	GCAGACAAATATAGCATAGTTCCACA	59.517	38.462	0.00	0.00	0.00	4.17
262	263	6.708054	AGCAGACAAATATAGCATAGTTCCAC	59.292	38.462	0.00	0.00	0.00	4.02
263	264	6.830912	AGCAGACAAATATAGCATAGTTCCA	58.169	36.000	0.00	0.00	0.00	3.53
264	265	7.736447	AAGCAGACAAATATAGCATAGTTCC	57.264	36.000	0.00	0.00	0.00	3.62
270	271	9.347240	AGTTTCATAAGCAGACAAATATAGCAT	57.653	29.630	0.00	0.00	0.00	3.79
271	272	8.737168	AGTTTCATAAGCAGACAAATATAGCA	57.263	30.769	0.00	0.00	0.00	3.49
275	276	9.123902	TGCATAGTTTCATAAGCAGACAAATAT	57.876	29.630	0.00	0.00	0.00	1.28
276	277	8.504812	TGCATAGTTTCATAAGCAGACAAATA	57.495	30.769	0.00	0.00	0.00	1.40
277	278	7.395190	TGCATAGTTTCATAAGCAGACAAAT	57.605	32.000	0.00	0.00	0.00	2.32
278	279	6.816134	TGCATAGTTTCATAAGCAGACAAA	57.184	33.333	0.00	0.00	0.00	2.83
279	280	6.816134	TTGCATAGTTTCATAAGCAGACAA	57.184	33.333	0.00	0.00	31.67	3.18
280	281	6.816134	TTTGCATAGTTTCATAAGCAGACA	57.184	33.333	0.00	0.00	31.67	3.41
281	282	9.956720	ATATTTTGCATAGTTTCATAAGCAGAC	57.043	29.630	0.00	0.00	31.67	3.51
282	283	9.955208	CATATTTTGCATAGTTTCATAAGCAGA	57.045	29.630	0.00	0.00	31.67	4.26
283	284	9.740239	ACATATTTTGCATAGTTTCATAAGCAG	57.260	29.630	0.00	0.00	31.67	4.24
284	285	9.518906	CACATATTTTGCATAGTTTCATAAGCA	57.481	29.630	0.00	0.00	0.00	3.91
285	286	9.520204	ACACATATTTTGCATAGTTTCATAAGC	57.480	29.630	0.00	0.00	0.00	3.09
306	307	9.859427	CTGTCATTTTTCAACCAATATACACAT	57.141	29.630	0.00	0.00	0.00	3.21
307	308	7.812191	GCTGTCATTTTTCAACCAATATACACA	59.188	33.333	0.00	0.00	0.00	3.72
308	309	7.812191	TGCTGTCATTTTTCAACCAATATACAC	59.188	33.333	0.00	0.00	0.00	2.90
309	310	7.890515	TGCTGTCATTTTTCAACCAATATACA	58.109	30.769	0.00	0.00	0.00	2.29
310	311	8.755696	TTGCTGTCATTTTTCAACCAATATAC	57.244	30.769	0.00	0.00	0.00	1.47
311	312	7.545265	GCTTGCTGTCATTTTTCAACCAATATA	59.455	33.333	0.00	0.00	0.00	0.86
312	313	6.369615	GCTTGCTGTCATTTTTCAACCAATAT	59.630	34.615	0.00	0.00	0.00	1.28
313	314	5.695816	GCTTGCTGTCATTTTTCAACCAATA	59.304	36.000	0.00	0.00	0.00	1.90
314	315	4.512571	GCTTGCTGTCATTTTTCAACCAAT	59.487	37.500	0.00	0.00	0.00	3.16
315	316	3.870419	GCTTGCTGTCATTTTTCAACCAA	59.130	39.130	0.00	0.00	0.00	3.67
316	317	3.132646	AGCTTGCTGTCATTTTTCAACCA	59.867	39.130	0.00	0.00	0.00	3.67
317	318	3.492011	CAGCTTGCTGTCATTTTTCAACC	59.508	43.478	13.89	0.00	0.00	3.77
318	319	3.492011	CCAGCTTGCTGTCATTTTTCAAC	59.508	43.478	19.49	0.00	0.00	3.18
319	320	3.719924	CCAGCTTGCTGTCATTTTTCAA	58.280	40.909	19.49	0.00	0.00	2.69
320	321	2.546373	GCCAGCTTGCTGTCATTTTTCA	60.546	45.455	19.49	0.00	0.00	2.69
321	322	2.064014	GCCAGCTTGCTGTCATTTTTC	58.936	47.619	19.49	0.00	0.00	2.29
322	323	1.270465	GGCCAGCTTGCTGTCATTTTT	60.270	47.619	19.49	0.00	0.00	1.94
323	324	0.319405	GGCCAGCTTGCTGTCATTTT	59.681	50.000	19.49	0.00	0.00	1.82
324	325	1.870055	CGGCCAGCTTGCTGTCATTT	61.870	55.000	19.49	0.00	32.81	2.32
325	326	2.338015	CGGCCAGCTTGCTGTCATT	61.338	57.895	19.49	0.00	32.81	2.57
326	327	2.749044	CGGCCAGCTTGCTGTCAT	60.749	61.111	19.49	0.00	32.81	3.06
330	331	3.490759	CGTACGGCCAGCTTGCTG	61.491	66.667	16.71	16.71	43.44	4.41
331	332	4.760047	CCGTACGGCCAGCTTGCT	62.760	66.667	23.44	0.00	0.00	3.91
341	342	4.089493	CGATAACTCATATTTGCCGTACGG	59.911	45.833	30.06	30.06	38.57	4.02
342	343	4.432503	GCGATAACTCATATTTGCCGTACG	60.433	45.833	8.69	8.69	0.00	3.67
343	344	4.432503	CGCGATAACTCATATTTGCCGTAC	60.433	45.833	0.00	0.00	0.00	3.67
344	345	3.671459	CGCGATAACTCATATTTGCCGTA	59.329	43.478	0.00	0.00	0.00	4.02
345	346	2.475111	CGCGATAACTCATATTTGCCGT	59.525	45.455	0.00	0.00	0.00	5.68
346	347	2.475111	ACGCGATAACTCATATTTGCCG	59.525	45.455	15.93	0.00	0.00	5.69
347	348	4.211389	CAACGCGATAACTCATATTTGCC	58.789	43.478	15.93	0.00	0.00	4.52
348	349	4.025229	TCCAACGCGATAACTCATATTTGC	60.025	41.667	15.93	0.00	0.00	3.68
349	350	5.432157	GTCCAACGCGATAACTCATATTTG	58.568	41.667	15.93	1.34	0.00	2.32
350	351	4.208460	CGTCCAACGCGATAACTCATATTT	59.792	41.667	15.93	0.00	33.65	1.40
351	352	3.734231	CGTCCAACGCGATAACTCATATT	59.266	43.478	15.93	0.00	33.65	1.28
352	353	3.305964	CGTCCAACGCGATAACTCATAT	58.694	45.455	15.93	0.00	33.65	1.78
353	354	2.723209	CGTCCAACGCGATAACTCATA	58.277	47.619	15.93	0.00	33.65	2.15
354	355	1.556564	CGTCCAACGCGATAACTCAT	58.443	50.000	15.93	0.00	33.65	2.90
355	356	3.024423	CGTCCAACGCGATAACTCA	57.976	52.632	15.93	0.00	33.65	3.41
365	366	1.129809	GTCGACAATGCGTCCAACG	59.870	57.895	11.55	0.00	45.88	4.10
366	367	1.495951	GGTCGACAATGCGTCCAAC	59.504	57.895	18.91	0.00	42.07	3.77
367	368	1.669760	GGGTCGACAATGCGTCCAA	60.670	57.895	18.91	0.00	42.07	3.53
368	369	2.047655	GGGTCGACAATGCGTCCA	60.048	61.111	18.91	0.00	42.07	4.02
369	370	1.231958	TTTGGGTCGACAATGCGTCC	61.232	55.000	18.91	7.85	42.07	4.79
370	371	0.110373	GTTTGGGTCGACAATGCGTC	60.110	55.000	18.91	0.00	41.62	5.19
371	372	0.816018	TGTTTGGGTCGACAATGCGT	60.816	50.000	18.91	0.00	0.00	5.24
372	373	0.309302	TTGTTTGGGTCGACAATGCG	59.691	50.000	18.91	0.00	31.30	4.73
373	374	2.500509	TTTGTTTGGGTCGACAATGC	57.499	45.000	18.91	0.00	35.85	3.56
374	375	7.341446	GTTTTTATTTGTTTGGGTCGACAATG	58.659	34.615	18.91	0.00	35.85	2.82
375	376	6.480651	GGTTTTTATTTGTTTGGGTCGACAAT	59.519	34.615	18.91	8.92	35.85	2.71
376	377	5.811100	GGTTTTTATTTGTTTGGGTCGACAA	59.189	36.000	18.91	0.40	34.22	3.18
377	378	5.349809	GGTTTTTATTTGTTTGGGTCGACA	58.650	37.500	18.91	0.00	0.00	4.35
378	379	4.441744	CGGTTTTTATTTGTTTGGGTCGAC	59.558	41.667	7.13	7.13	0.00	4.20
379	380	4.499357	CCGGTTTTTATTTGTTTGGGTCGA	60.499	41.667	0.00	0.00	0.00	4.20
380	381	3.736759	CCGGTTTTTATTTGTTTGGGTCG	59.263	43.478	0.00	0.00	0.00	4.79
381	382	4.746115	GTCCGGTTTTTATTTGTTTGGGTC	59.254	41.667	0.00	0.00	0.00	4.46
382	383	4.161754	TGTCCGGTTTTTATTTGTTTGGGT	59.838	37.500	0.00	0.00	0.00	4.51
383	384	4.694339	TGTCCGGTTTTTATTTGTTTGGG	58.306	39.130	0.00	0.00	0.00	4.12
384	385	6.663944	TTTGTCCGGTTTTTATTTGTTTGG	57.336	33.333	0.00	0.00	0.00	3.28
385	386	6.679081	CGTTTTGTCCGGTTTTTATTTGTTTG	59.321	34.615	0.00	0.00	0.00	2.93
386	387	6.672596	GCGTTTTGTCCGGTTTTTATTTGTTT	60.673	34.615	0.00	0.00	0.00	2.83
387	388	5.220434	GCGTTTTGTCCGGTTTTTATTTGTT	60.220	36.000	0.00	0.00	0.00	2.83
388	389	4.268167	GCGTTTTGTCCGGTTTTTATTTGT	59.732	37.500	0.00	0.00	0.00	2.83
389	390	4.267928	TGCGTTTTGTCCGGTTTTTATTTG	59.732	37.500	0.00	0.00	0.00	2.32
390	391	4.268167	GTGCGTTTTGTCCGGTTTTTATTT	59.732	37.500	0.00	0.00	0.00	1.40
391	392	3.797796	GTGCGTTTTGTCCGGTTTTTATT	59.202	39.130	0.00	0.00	0.00	1.40
392	393	3.181489	TGTGCGTTTTGTCCGGTTTTTAT	60.181	39.130	0.00	0.00	0.00	1.40
393	394	2.163010	TGTGCGTTTTGTCCGGTTTTTA	59.837	40.909	0.00	0.00	0.00	1.52
394	395	1.067776	TGTGCGTTTTGTCCGGTTTTT	60.068	42.857	0.00	0.00	0.00	1.94
395	396	0.526662	TGTGCGTTTTGTCCGGTTTT	59.473	45.000	0.00	0.00	0.00	2.43
396	397	0.741915	ATGTGCGTTTTGTCCGGTTT	59.258	45.000	0.00	0.00	0.00	3.27
397	398	0.309612	GATGTGCGTTTTGTCCGGTT	59.690	50.000	0.00	0.00	0.00	4.44
398	399	1.512156	GGATGTGCGTTTTGTCCGGT	61.512	55.000	0.00	0.00	0.00	5.28
399	400	1.209127	GGATGTGCGTTTTGTCCGG	59.791	57.895	0.00	0.00	0.00	5.14
400	401	1.154488	CGGATGTGCGTTTTGTCCG	60.154	57.895	0.00	0.00	44.72	4.79
401	402	0.309612	AACGGATGTGCGTTTTGTCC	59.690	50.000	6.48	0.00	0.00	4.02
402	403	1.778591	CAAACGGATGTGCGTTTTGTC	59.221	47.619	19.81	0.00	36.36	3.18
403	404	1.535015	CCAAACGGATGTGCGTTTTGT	60.535	47.619	19.81	0.00	36.36	2.83
404	405	1.127701	CCAAACGGATGTGCGTTTTG	58.872	50.000	19.81	14.04	36.36	2.44
405	406	0.741915	ACCAAACGGATGTGCGTTTT	59.258	45.000	19.81	6.60	36.36	2.43
406	407	0.030101	CACCAAACGGATGTGCGTTT	59.970	50.000	17.30	17.30	38.63	3.60
407	408	1.652012	CACCAAACGGATGTGCGTT	59.348	52.632	6.48	6.48	0.00	4.84
408	409	2.258013	CCACCAAACGGATGTGCGT	61.258	57.895	0.00	0.00	0.00	5.24
409	410	1.963855	TCCACCAAACGGATGTGCG	60.964	57.895	0.00	0.00	0.00	5.34
410	411	1.579429	GTCCACCAAACGGATGTGC	59.421	57.895	0.00	0.00	34.32	4.57
411	412	1.866237	CGTCCACCAAACGGATGTG	59.134	57.895	0.00	0.00	35.22	3.21
412	413	1.448497	ACGTCCACCAAACGGATGT	59.552	52.632	0.00	0.00	45.92	3.06
413	414	2.018542	ATACGTCCACCAAACGGATG	57.981	50.000	0.00	0.00	41.96	3.51
414	415	2.027929	TCAATACGTCCACCAAACGGAT	60.028	45.455	0.00	0.00	45.34	4.18
415	416	1.343789	TCAATACGTCCACCAAACGGA	59.656	47.619	0.00	0.00	44.21	4.69
416	417	1.798283	TCAATACGTCCACCAAACGG	58.202	50.000	0.00	0.00	44.21	4.44
417	418	2.803956	ACTTCAATACGTCCACCAAACG	59.196	45.455	0.00	0.00	45.37	3.60
418	419	4.533222	CAACTTCAATACGTCCACCAAAC	58.467	43.478	0.00	0.00	0.00	2.93
419	420	3.003897	GCAACTTCAATACGTCCACCAAA	59.996	43.478	0.00	0.00	0.00	3.28
430	431	4.151689	GTGCACGTTAGAGCAACTTCAATA	59.848	41.667	0.00	0.00	45.01	1.90
495	496	2.029290	TCTTTCGTGAGTTCCTACCAGC	60.029	50.000	0.00	0.00	0.00	4.85
510	511	1.264288	GGTGCAGTGGTTCTTCTTTCG	59.736	52.381	0.00	0.00	0.00	3.46
530	531	2.738314	TGTCAATGAAGATGCTCACACG	59.262	45.455	0.00	0.00	0.00	4.49
533	534	5.368256	ACTTTGTCAATGAAGATGCTCAC	57.632	39.130	5.52	0.00	0.00	3.51
534	535	4.152938	CGACTTTGTCAATGAAGATGCTCA	59.847	41.667	5.52	0.00	32.09	4.26
754	771	3.163231	TACGTCTCACCCCACCCCA	62.163	63.158	0.00	0.00	0.00	4.96
855	872	2.988800	GAGGCTGCTGCTTCTCCT	59.011	61.111	18.58	5.79	41.38	3.69
883	900	0.672091	TGTCAAGTGCGTGTGTGTGT	60.672	50.000	0.00	0.00	0.00	3.72
891	908	0.384309	TCTCGTCTTGTCAAGTGCGT	59.616	50.000	21.81	0.00	32.86	5.24
892	909	0.778815	GTCTCGTCTTGTCAAGTGCG	59.221	55.000	18.92	18.92	0.00	5.34
893	910	0.778815	CGTCTCGTCTTGTCAAGTGC	59.221	55.000	12.30	6.23	0.00	4.40
894	911	1.001706	TCCGTCTCGTCTTGTCAAGTG	60.002	52.381	12.30	6.83	0.00	3.16
952	979	0.338814	GGACAACTCCTCCCTCCCTA	59.661	60.000	0.00	0.00	33.07	3.53
1131	1169	2.551912	CGGTGGGTGGAACAAGTGC	61.552	63.158	0.00	0.00	44.16	4.40
1155	1193	1.597989	CTCTGCTGCTTCTGGCTCT	59.402	57.895	0.00	0.00	42.39	4.09
1209	1247	2.126888	GACGCATTGTTGGTGCCG	60.127	61.111	0.00	0.00	39.39	5.69
1210	1248	1.081242	CAGACGCATTGTTGGTGCC	60.081	57.895	0.00	0.00	39.39	5.01
1211	1249	1.081242	CCAGACGCATTGTTGGTGC	60.081	57.895	0.00	0.00	39.18	5.01
2261	2299	9.853177	CAAGGTGTCCTCTCCTTATAAATAAAT	57.147	33.333	0.00	0.00	43.13	1.40
2288	2331	3.804193	CTTCCCTTTCAGCGGCGC	61.804	66.667	26.86	26.86	0.00	6.53
2327	2370	4.731612	AGACCGCTGCTCGCACAG	62.732	66.667	0.00	0.59	40.80	3.66
2615	2658	1.941294	TCGTAGAACCTCTCGATCAGC	59.059	52.381	0.00	0.00	0.00	4.26
2674	2717	9.881529	CCAGTAAATTATACTCGAGTAAGAGAC	57.118	37.037	27.90	19.28	40.57	3.36
2675	2718	9.842775	TCCAGTAAATTATACTCGAGTAAGAGA	57.157	33.333	27.90	14.53	40.57	3.10
3003	3055	1.299850	CACGCGCGGGATGAATCTA	60.300	57.895	35.22	0.00	0.00	1.98
3005	3057	4.299316	GCACGCGCGGGATGAATC	62.299	66.667	39.76	13.72	0.00	2.52
3069	3141	5.163290	GGAAAGGGCAAAGCTATCTACTACT	60.163	44.000	0.00	0.00	0.00	2.57
3070	3142	5.057819	GGAAAGGGCAAAGCTATCTACTAC	58.942	45.833	0.00	0.00	0.00	2.73
3106	3187	1.281199	TGGGATGGGTGTGATGAGGG	61.281	60.000	0.00	0.00	0.00	4.30
3153	3234	3.530149	GGGGGTATCTAGCTCCTCTATCT	59.470	52.174	0.00	0.00	41.12	1.98
3307	3614	6.857777	TGCTTCTTCTTCTTCTTCTTCTTG	57.142	37.500	0.00	0.00	0.00	3.02
3397	3969	9.914834	TGTTACCAACTCCTAATAGCATTTATT	57.085	29.630	0.00	0.00	0.00	1.40
3398	3970	9.561069	CTGTTACCAACTCCTAATAGCATTTAT	57.439	33.333	0.00	0.00	0.00	1.40
3399	3971	8.545472	ACTGTTACCAACTCCTAATAGCATTTA	58.455	33.333	0.00	0.00	0.00	1.40
3400	3972	7.402862	ACTGTTACCAACTCCTAATAGCATTT	58.597	34.615	0.00	0.00	0.00	2.32
3401	3973	6.958767	ACTGTTACCAACTCCTAATAGCATT	58.041	36.000	0.00	0.00	0.00	3.56
3407	3979	7.177392	ACGTACTAACTGTTACCAACTCCTAAT	59.823	37.037	0.00	0.00	0.00	1.73
3443	4018	2.220786	AAATGGAGGAGGCAGGCAGG	62.221	60.000	0.00	0.00	0.00	4.85
3444	4019	0.324091	AAAATGGAGGAGGCAGGCAG	60.324	55.000	0.00	0.00	0.00	4.85
3445	4020	0.323725	GAAAATGGAGGAGGCAGGCA	60.324	55.000	0.00	0.00	0.00	4.75
3486	4061	2.159393	TCAGCTGCTTGTGTTGTGTTTC	60.159	45.455	9.47	0.00	0.00	2.78
3509	4091	4.570874	GCCCATTCTCGGCTCCCC	62.571	72.222	0.00	0.00	43.48	4.81
3510	4092	4.570874	GGCCCATTCTCGGCTCCC	62.571	72.222	0.00	0.00	46.24	4.30
3926	4972	6.759827	GACTTGTCAGTAGTACTCCTCTAGAG	59.240	46.154	13.18	13.18	40.26	2.43
3927	4973	6.212993	TGACTTGTCAGTAGTACTCCTCTAGA	59.787	42.308	0.00	0.00	31.22	2.43
3928	4974	6.408035	TGACTTGTCAGTAGTACTCCTCTAG	58.592	44.000	0.00	3.45	31.22	2.43
3929	4975	6.370186	TGACTTGTCAGTAGTACTCCTCTA	57.630	41.667	0.00	0.00	31.22	2.43
3931	4977	5.961396	TTGACTTGTCAGTAGTACTCCTC	57.039	43.478	0.00	0.00	31.22	3.71
3933	4979	7.773149	ACATATTGACTTGTCAGTAGTACTCC	58.227	38.462	0.00	0.00	31.22	3.85
3939	5007	8.773645	TGTTCAAACATATTGACTTGTCAGTAG	58.226	33.333	10.76	6.65	33.17	2.57
4249	5317	1.690633	GTCCCCTCTGGCCATGAGA	60.691	63.158	25.15	12.26	33.68	3.27
4333	5401	2.725312	CCTTGCGCTGCTCCTCCTA	61.725	63.158	9.73	0.00	0.00	2.94
4518	5586	0.729690	GAACGCCAGCTTCTCCATTC	59.270	55.000	0.00	0.00	0.00	2.67
4519	5587	0.678048	GGAACGCCAGCTTCTCCATT	60.678	55.000	0.00	0.00	0.00	3.16
4520	5588	1.078143	GGAACGCCAGCTTCTCCAT	60.078	57.895	0.00	0.00	0.00	3.41
4521	5589	2.347490	GGAACGCCAGCTTCTCCA	59.653	61.111	0.00	0.00	0.00	3.86
6335	7409	0.523072	CAAACGTTGGATGCAGAGGG	59.477	55.000	0.00	0.00	0.00	4.30
6494	7588	4.520111	TGAATTGGATTCTCTTGTGGTGTG	59.480	41.667	2.74	0.00	39.96	3.82
6495	7589	4.728772	TGAATTGGATTCTCTTGTGGTGT	58.271	39.130	2.74	0.00	39.96	4.16
6539	7633	0.105453	ATGAGGGGTCGAGCCTATGT	60.105	55.000	31.09	14.79	37.43	2.29
6638	7744	6.319405	TGATGTAACATTGTCAGCTATGCAAT	59.681	34.615	0.00	0.00	35.15	3.56
6639	7745	5.647225	TGATGTAACATTGTCAGCTATGCAA	59.353	36.000	0.00	0.00	32.39	4.08
6641	7747	5.739752	TGATGTAACATTGTCAGCTATGC	57.260	39.130	0.00	0.00	32.39	3.14
6642	7748	9.874215	CTAAATGATGTAACATTGTCAGCTATG	57.126	33.333	0.00	0.00	39.88	2.23
6770	10448	6.373216	TGAAATGTCACCGATTTACTTTAGGG	59.627	38.462	0.00	0.00	0.00	3.53
6798	10476	0.695924	TGGCCCCTCTCATCGAAAAA	59.304	50.000	0.00	0.00	0.00	1.94
6799	10477	0.035439	GTGGCCCCTCTCATCGAAAA	60.035	55.000	0.00	0.00	0.00	2.29
6800	10478	1.198094	TGTGGCCCCTCTCATCGAAA	61.198	55.000	0.00	0.00	0.00	3.46
6801	10479	0.982852	ATGTGGCCCCTCTCATCGAA	60.983	55.000	0.00	0.00	0.00	3.71
6802	10480	1.383109	ATGTGGCCCCTCTCATCGA	60.383	57.895	0.00	0.00	0.00	3.59
6803	10481	1.227764	CATGTGGCCCCTCTCATCG	60.228	63.158	0.00	0.00	0.00	3.84
6804	10482	1.527844	GCATGTGGCCCCTCTCATC	60.528	63.158	0.00	0.00	36.11	2.92
6805	10483	2.599597	GCATGTGGCCCCTCTCAT	59.400	61.111	0.00	0.00	36.11	2.90
6814	10492	1.221566	GAAAATGGGGGCATGTGGC	59.778	57.895	0.00	0.00	43.74	5.01
6815	10493	0.982704	TTGAAAATGGGGGCATGTGG	59.017	50.000	0.00	0.00	0.00	4.17
6816	10494	2.739287	CGATTGAAAATGGGGGCATGTG	60.739	50.000	0.00	0.00	0.00	3.21
6817	10495	1.481772	CGATTGAAAATGGGGGCATGT	59.518	47.619	0.00	0.00	0.00	3.21
6818	10496	1.755959	TCGATTGAAAATGGGGGCATG	59.244	47.619	0.00	0.00	0.00	4.06
6819	10497	2.157640	TCGATTGAAAATGGGGGCAT	57.842	45.000	0.00	0.00	0.00	4.40
6820	10498	1.755959	CATCGATTGAAAATGGGGGCA	59.244	47.619	0.00	0.00	0.00	5.36
6821	10499	2.031120	TCATCGATTGAAAATGGGGGC	58.969	47.619	0.00	0.00	0.00	5.80
6822	10500	3.023119	TGTCATCGATTGAAAATGGGGG	58.977	45.455	0.00	0.00	35.70	5.40
6823	10501	4.924305	ATGTCATCGATTGAAAATGGGG	57.076	40.909	0.00	0.00	35.70	4.96
6824	10502	6.331845	TGAAATGTCATCGATTGAAAATGGG	58.668	36.000	0.00	0.00	35.70	4.00
6825	10503	7.703197	TCATGAAATGTCATCGATTGAAAATGG	59.297	33.333	0.00	0.00	46.80	3.16
6826	10504	8.623310	TCATGAAATGTCATCGATTGAAAATG	57.377	30.769	0.00	0.00	46.80	2.32
6827	10505	7.434307	GCTCATGAAATGTCATCGATTGAAAAT	59.566	33.333	0.00	0.00	46.80	1.82
6828	10506	6.748658	GCTCATGAAATGTCATCGATTGAAAA	59.251	34.615	0.00	0.00	46.80	2.29
6829	10507	6.127952	TGCTCATGAAATGTCATCGATTGAAA	60.128	34.615	0.00	0.00	46.80	2.69
6830	10508	5.354792	TGCTCATGAAATGTCATCGATTGAA	59.645	36.000	0.00	0.00	46.80	2.69
6831	10509	4.877251	TGCTCATGAAATGTCATCGATTGA	59.123	37.500	0.00	0.00	46.80	2.57
6832	10510	5.164606	TGCTCATGAAATGTCATCGATTG	57.835	39.130	0.00	0.00	46.80	2.67
6872	10550	4.214971	GCGGATTGATTTCAGTATGCTCAT	59.785	41.667	0.00	0.00	34.76	2.90
6873	10551	3.561310	GCGGATTGATTTCAGTATGCTCA	59.439	43.478	0.00	0.00	34.76	4.26
6874	10552	3.058639	GGCGGATTGATTTCAGTATGCTC	60.059	47.826	0.00	0.00	34.76	4.26
6875	10553	2.880890	GGCGGATTGATTTCAGTATGCT	59.119	45.455	0.00	0.00	34.76	3.79
6876	10554	2.030805	GGGCGGATTGATTTCAGTATGC	60.031	50.000	0.00	0.00	34.76	3.14
6877	10555	2.554032	GGGGCGGATTGATTTCAGTATG	59.446	50.000	0.00	0.00	37.54	2.39
6878	10556	2.489073	GGGGGCGGATTGATTTCAGTAT	60.489	50.000	0.00	0.00	0.00	2.12
6879	10557	1.133915	GGGGGCGGATTGATTTCAGTA	60.134	52.381	0.00	0.00	0.00	2.74
6880	10558	0.395724	GGGGGCGGATTGATTTCAGT	60.396	55.000	0.00	0.00	0.00	3.41
6881	10559	0.395586	TGGGGGCGGATTGATTTCAG	60.396	55.000	0.00	0.00	0.00	3.02
6882	10560	0.682855	GTGGGGGCGGATTGATTTCA	60.683	55.000	0.00	0.00	0.00	2.69
6883	10561	0.395724	AGTGGGGGCGGATTGATTTC	60.396	55.000	0.00	0.00	0.00	2.17
6884	10562	0.923358	TAGTGGGGGCGGATTGATTT	59.077	50.000	0.00	0.00	0.00	2.17
6885	10563	1.149101	ATAGTGGGGGCGGATTGATT	58.851	50.000	0.00	0.00	0.00	2.57
6886	10564	1.149101	AATAGTGGGGGCGGATTGAT	58.851	50.000	0.00	0.00	0.00	2.57
6887	10565	0.182537	CAATAGTGGGGGCGGATTGA	59.817	55.000	0.00	0.00	30.62	2.57
6888	10566	0.106719	ACAATAGTGGGGGCGGATTG	60.107	55.000	0.00	0.00	34.40	2.67
6889	10567	1.420138	CTACAATAGTGGGGGCGGATT	59.580	52.381	0.00	0.00	0.00	3.01
6890	10568	1.056660	CTACAATAGTGGGGGCGGAT	58.943	55.000	0.00	0.00	0.00	4.18
6891	10569	0.031917	TCTACAATAGTGGGGGCGGA	60.032	55.000	0.00	0.00	0.00	5.54
6892	10570	0.834612	TTCTACAATAGTGGGGGCGG	59.165	55.000	0.00	0.00	0.00	6.13
6893	10571	2.930826	ATTCTACAATAGTGGGGGCG	57.069	50.000	0.00	0.00	0.00	6.13
6894	10572	4.288626	TCCATATTCTACAATAGTGGGGGC	59.711	45.833	0.00	0.00	31.03	5.80
6895	10573	5.571658	GCTCCATATTCTACAATAGTGGGGG	60.572	48.000	0.00	0.00	31.07	5.40
6966	10644	3.055591	CGAAGATCATCGTGGAATCTGG	58.944	50.000	12.03	0.00	38.01	3.86
6977	10655	2.315925	TTGGGTGCTCGAAGATCATC	57.684	50.000	0.00	0.00	34.28	2.92
7011	10689	2.334977	TGGCTCTTTGTGGAGGACTTA	58.665	47.619	0.00	0.00	34.21	2.24
7012	10690	1.140312	TGGCTCTTTGTGGAGGACTT	58.860	50.000	0.00	0.00	34.21	3.01
7020	10698	2.421424	GCTGAACCTATGGCTCTTTGTG	59.579	50.000	0.00	0.00	0.00	3.33
7021	10699	2.716217	GCTGAACCTATGGCTCTTTGT	58.284	47.619	0.00	0.00	0.00	2.83
7035	10713	1.210155	GGATGTGCAACCGCTGAAC	59.790	57.895	0.00	0.00	39.64	3.18
7042	10720	2.080693	TCATGTTACGGATGTGCAACC	58.919	47.619	0.00	0.00	34.36	3.77
7073	10751	4.499183	GGAGGCGATCTCTGGTATAATTG	58.501	47.826	6.25	0.00	42.10	2.32
7075	10753	3.100671	GGGAGGCGATCTCTGGTATAAT	58.899	50.000	6.25	0.00	42.10	1.28
7077	10755	1.272536	GGGGAGGCGATCTCTGGTATA	60.273	57.143	6.25	0.00	42.10	1.47
7082	10760	2.818132	GTGGGGAGGCGATCTCTG	59.182	66.667	6.25	0.00	42.10	3.35
7083	10761	2.835431	CGTGGGGAGGCGATCTCT	60.835	66.667	6.25	0.00	42.10	3.10
7099	10777	4.963276	TTGATGTCCTTCAAAATAGCCG	57.037	40.909	0.00	0.00	32.82	5.52
7125	10803	5.762825	ATTTTGAGGATGGTTCATGATCG	57.237	39.130	0.00	0.00	0.00	3.69
7197	10875	0.679960	AGCAGGTGAATAAACCGGGC	60.680	55.000	6.32	0.00	45.53	6.13
7203	10881	4.985538	ACCTTCAAGAGCAGGTGAATAAA	58.014	39.130	0.00	0.00	42.20	1.40
7210	10888	2.708325	AGAAGAACCTTCAAGAGCAGGT	59.292	45.455	9.10	0.00	46.04	4.00
7222	10900	6.041979	ACAACCAATTATGCAAAGAAGAACCT	59.958	34.615	0.00	0.00	0.00	3.50
7247	10925	1.490490	CCCTTGCTATCCAGGCACTTA	59.510	52.381	0.00	0.00	39.55	2.24
7280	10958	2.162681	AGGCTGTGCATGTTAAACCTC	58.837	47.619	0.00	0.00	0.00	3.85
7297	10975	1.552792	ACACAGAGAAGCTAGGAAGGC	59.447	52.381	0.00	0.00	0.00	4.35
7304	10982	4.890158	TGGATTGAACACAGAGAAGCTA	57.110	40.909	0.00	0.00	0.00	3.32
7319	10997	5.327616	TGCATCTTGGTACATTTGGATTG	57.672	39.130	0.00	0.00	39.30	2.67
7322	11000	4.148079	TGTTGCATCTTGGTACATTTGGA	58.852	39.130	0.00	0.00	39.30	3.53

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.