Multiple sequence alignment - TraesCS7D01G283800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G283800 chr7D 100.000 8656 0 0 1 8656 296495930 296504585 0.000000e+00 15985.0
1 TraesCS7D01G283800 chr7D 95.984 249 5 5 4178 4424 465340571 465340326 4.870000e-107 399.0
2 TraesCS7D01G283800 chr7D 92.391 184 4 2 6588 6771 29807292 29807465 4.010000e-63 254.0
3 TraesCS7D01G283800 chr7D 92.350 183 4 2 6591 6773 152309734 152309562 1.440000e-62 252.0
4 TraesCS7D01G283800 chr7D 90.426 188 8 2 6586 6773 409488197 409488374 1.120000e-58 239.0
5 TraesCS7D01G283800 chr7D 90.960 177 13 2 5150 5324 397555078 397554903 1.450000e-57 235.0
6 TraesCS7D01G283800 chr7D 88.235 187 19 3 5134 5319 619400658 619400842 4.070000e-53 220.0
7 TraesCS7D01G283800 chr7D 95.960 99 3 1 6573 6670 593249007 593248909 8.990000e-35 159.0
8 TraesCS7D01G283800 chr7B 97.142 2274 44 11 4322 6588 339608503 339610762 0.000000e+00 3819.0
9 TraesCS7D01G283800 chr7B 96.202 2238 55 13 957 3165 339605837 339608073 0.000000e+00 3635.0
10 TraesCS7D01G283800 chr7B 95.011 922 17 8 6771 7685 339610760 339611659 0.000000e+00 1421.0
11 TraesCS7D01G283800 chr7B 91.527 838 35 10 7834 8650 339611658 339612480 0.000000e+00 1122.0
12 TraesCS7D01G283800 chr7B 88.087 596 53 5 1 578 339603871 339604466 0.000000e+00 691.0
13 TraesCS7D01G283800 chr7B 86.786 560 44 12 2394 2928 450597025 450596471 1.610000e-166 597.0
14 TraesCS7D01G283800 chr7B 93.750 368 14 2 3271 3638 339608068 339608426 2.130000e-150 544.0
15 TraesCS7D01G283800 chr7B 92.697 178 12 1 780 957 339604583 339604759 1.120000e-63 255.0
16 TraesCS7D01G283800 chr7B 97.561 82 2 0 3707 3788 339608427 339608508 3.260000e-29 141.0
17 TraesCS7D01G283800 chr7B 97.059 34 1 0 2392 2425 339608428 339608461 3.380000e-04 58.4
18 TraesCS7D01G283800 chrUn 97.955 1565 23 5 5030 6588 116287037 116288598 0.000000e+00 2704.0
19 TraesCS7D01G283800 chrUn 98.430 1529 21 3 980 2506 116282614 116284141 0.000000e+00 2687.0
20 TraesCS7D01G283800 chrUn 95.266 1711 47 12 2462 4138 116284138 116285848 0.000000e+00 2680.0
21 TraesCS7D01G283800 chrUn 97.661 898 17 3 4136 5032 116286031 116286925 0.000000e+00 1539.0
22 TraesCS7D01G283800 chrUn 97.120 764 5 3 6771 7532 116288596 116289344 0.000000e+00 1273.0
23 TraesCS7D01G283800 chrUn 95.824 455 14 2 7852 8306 116289341 116289790 0.000000e+00 730.0
24 TraesCS7D01G283800 chrUn 95.455 352 16 0 8305 8656 116291562 116291913 5.870000e-156 562.0
25 TraesCS7D01G283800 chrUn 97.414 232 6 0 8122 8353 231560634 231560865 6.300000e-106 396.0
26 TraesCS7D01G283800 chrUn 97.414 232 6 0 8122 8353 273327493 273327262 6.300000e-106 396.0
27 TraesCS7D01G283800 chrUn 97.414 232 6 0 8122 8353 403938322 403938091 6.300000e-106 396.0
28 TraesCS7D01G283800 chr3B 86.918 558 45 12 2394 2928 141751302 141750750 1.240000e-167 601.0
29 TraesCS7D01G283800 chr3B 97.414 232 6 0 8122 8353 6001250 6001481 6.300000e-106 396.0
30 TraesCS7D01G283800 chr3B 97.414 232 6 0 8122 8353 92287226 92287457 6.300000e-106 396.0
31 TraesCS7D01G283800 chr3B 94.969 159 5 3 6614 6771 739952718 739952562 6.710000e-61 246.0
32 TraesCS7D01G283800 chr2B 86.786 560 44 12 2394 2928 338746603 338746049 1.610000e-166 597.0
33 TraesCS7D01G283800 chr2B 97.414 232 6 0 8122 8353 234531643 234531874 6.300000e-106 396.0
34 TraesCS7D01G283800 chr2B 92.391 184 4 2 6588 6771 354689978 354689805 4.010000e-63 254.0
35 TraesCS7D01G283800 chr2A 86.501 563 46 11 2391 2928 116437896 116438453 7.480000e-165 592.0
36 TraesCS7D01G283800 chr2A 86.501 563 46 11 2391 2928 448501784 448502341 7.480000e-165 592.0
37 TraesCS7D01G283800 chr2A 96.327 245 7 2 4180 4424 421219283 421219041 1.350000e-107 401.0
38 TraesCS7D01G283800 chr2A 97.872 47 1 0 3386 3432 455348211 455348165 2.000000e-11 82.4
39 TraesCS7D01G283800 chr4B 86.559 558 45 12 2394 2926 28228313 28227761 9.680000e-164 588.0
40 TraesCS7D01G283800 chr4B 92.771 166 9 2 5150 5313 532435163 532434999 4.040000e-58 237.0
41 TraesCS7D01G283800 chr4B 77.184 206 45 2 1365 1569 67772063 67772267 1.530000e-22 119.0
42 TraesCS7D01G283800 chr5B 86.429 560 46 12 2394 2928 560436371 560435817 3.480000e-163 586.0
43 TraesCS7D01G283800 chr6D 85.714 532 49 11 2419 2928 230784561 230784035 3.560000e-148 536.0
44 TraesCS7D01G283800 chr6A 97.479 238 4 2 4187 4424 62849128 62848893 1.050000e-108 405.0
45 TraesCS7D01G283800 chr5D 97.479 238 4 2 4187 4424 404500863 404500628 1.050000e-108 405.0
46 TraesCS7D01G283800 chr5D 90.155 193 9 2 6583 6775 2786276 2786458 8.680000e-60 243.0
47 TraesCS7D01G283800 chr4D 97.479 238 4 2 4187 4424 152007839 152008074 1.050000e-108 405.0
48 TraesCS7D01G283800 chr4D 98.936 94 1 0 6584 6677 124601752 124601659 1.490000e-37 169.0
49 TraesCS7D01G283800 chr4D 78.155 206 43 2 1365 1569 46292090 46291886 7.050000e-26 130.0
50 TraesCS7D01G283800 chr1D 97.479 238 4 2 4187 4424 94050661 94050896 1.050000e-108 405.0
51 TraesCS7D01G283800 chr1D 94.444 198 1 3 6586 6773 121242470 121242273 6.570000e-76 296.0
52 TraesCS7D01G283800 chr1D 93.333 195 2 1 6588 6771 465346054 465346248 2.380000e-70 278.0
53 TraesCS7D01G283800 chr1D 92.308 182 4 2 6590 6771 200883359 200883188 5.190000e-62 250.0
54 TraesCS7D01G283800 chr1D 90.426 188 8 2 6588 6775 2720404 2720227 1.120000e-58 239.0
55 TraesCS7D01G283800 chr1A 96.371 248 6 3 4179 4424 106827696 106827450 1.050000e-108 405.0
56 TraesCS7D01G283800 chr1A 97.479 238 4 2 4187 4424 127703770 127704005 1.050000e-108 405.0
57 TraesCS7D01G283800 chr3A 97.414 232 6 0 8122 8353 495093023 495093254 6.300000e-106 396.0
58 TraesCS7D01G283800 chr3A 92.683 164 10 1 5150 5311 739325175 739325012 1.450000e-57 235.0
59 TraesCS7D01G283800 chr3D 95.676 185 5 3 6587 6770 53837658 53837840 2.360000e-75 294.0
60 TraesCS7D01G283800 chr3D 90.955 199 7 1 6588 6775 590073146 590073344 3.100000e-64 257.0
61 TraesCS7D01G283800 chr3D 93.373 166 9 1 5151 5314 87926161 87925996 2.410000e-60 244.0
62 TraesCS7D01G283800 chr3D 89.899 198 9 1 6585 6771 597544002 597544199 2.410000e-60 244.0
63 TraesCS7D01G283800 chr3D 86.869 198 13 6 6584 6771 59276939 59277133 8.810000e-50 209.0
64 TraesCS7D01G283800 chr7A 90.960 177 13 2 5150 5324 451519810 451519985 1.450000e-57 235.0
65 TraesCS7D01G283800 chr5A 91.279 172 12 2 5150 5319 320214406 320214236 1.880000e-56 231.0
66 TraesCS7D01G283800 chr4A 77.670 206 44 2 1365 1569 552699306 552699510 3.280000e-24 124.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G283800 chr7D 296495930 296504585 8655 False 15985.000000 15985 100.000000 1 8656 1 chr7D.!!$F2 8655
1 TraesCS7D01G283800 chr7B 339603871 339612480 8609 False 1298.488889 3819 94.337333 1 8650 9 chr7B.!!$F1 8649
2 TraesCS7D01G283800 chr7B 450596471 450597025 554 True 597.000000 597 86.786000 2394 2928 1 chr7B.!!$R1 534
3 TraesCS7D01G283800 chrUn 116282614 116291913 9299 False 1739.285714 2704 96.815857 980 8656 7 chrUn.!!$F2 7676
4 TraesCS7D01G283800 chr3B 141750750 141751302 552 True 601.000000 601 86.918000 2394 2928 1 chr3B.!!$R1 534
5 TraesCS7D01G283800 chr2B 338746049 338746603 554 True 597.000000 597 86.786000 2394 2928 1 chr2B.!!$R1 534
6 TraesCS7D01G283800 chr2A 116437896 116438453 557 False 592.000000 592 86.501000 2391 2928 1 chr2A.!!$F1 537
7 TraesCS7D01G283800 chr2A 448501784 448502341 557 False 592.000000 592 86.501000 2391 2928 1 chr2A.!!$F2 537
8 TraesCS7D01G283800 chr4B 28227761 28228313 552 True 588.000000 588 86.559000 2394 2926 1 chr4B.!!$R1 532
9 TraesCS7D01G283800 chr5B 560435817 560436371 554 True 586.000000 586 86.429000 2394 2928 1 chr5B.!!$R1 534
10 TraesCS7D01G283800 chr6D 230784035 230784561 526 True 536.000000 536 85.714000 2419 2928 1 chr6D.!!$R1 509

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
241 242 0.034186 TGAATCCCACCATCCAGTGC 60.034 55.000 0.0 0.0 36.38 4.40 F
265 266 0.036732 TGCTTCGCCTCAATGTTCCT 59.963 50.000 0.0 0.0 0.00 3.36 F
354 355 0.250901 GAAGGCTCCTGAACCAAGCA 60.251 55.000 0.0 0.0 37.78 3.91 F
738 757 0.322816 GCATGTTCTCTGGGGAGCAA 60.323 55.000 0.0 0.0 39.31 3.91 F
861 880 0.608130 GCCATCCAGTTTCCCCAAAC 59.392 55.000 0.0 0.0 42.14 2.93 F
2710 3873 1.067821 GCTCAGTAGATTCTCCACCCG 59.932 57.143 0.0 0.0 0.00 5.28 F
3404 4597 0.546267 TCCTCCTCTGCTGCCTTCTT 60.546 55.000 0.0 0.0 0.00 2.52 F
3621 4818 0.166597 CGTACCAGCTCGTGTTCGTA 59.833 55.000 0.0 0.0 38.33 3.43 F
4129 5332 0.888736 TTGTGCCAGGACCATGTTCG 60.889 55.000 0.0 0.0 0.00 3.95 F
4289 5677 0.918258 TGGCTCTGGCACATGGATAA 59.082 50.000 0.0 0.0 38.20 1.75 F
4415 5803 2.158986 CCTCTCTTGACATTCTCCGCAT 60.159 50.000 0.0 0.0 0.00 4.73 F
5091 6594 3.554337 CGCCGCCATAAACTCTATAACCT 60.554 47.826 0.0 0.0 0.00 3.50 F
6610 8123 0.185175 GGTGTTTGGTTCCAGGGACT 59.815 55.000 0.0 0.0 43.88 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1753 2851 0.255890 ACATTGCCACCCTAGCGATT 59.744 50.000 0.00 0.00 31.76 3.34 R
1837 2936 3.428045 GGCACACTACAAATGAATCCTGC 60.428 47.826 0.00 0.00 0.00 4.85 R
2350 3452 3.068873 CCCATGTGCTAGACCTAGAAGAC 59.931 52.174 8.16 2.36 35.21 3.01 R
2710 3873 0.908198 AGGGTTGAGTGAGATGCTCC 59.092 55.000 0.00 0.00 32.31 4.70 R
2802 3965 3.320610 TTGTGGGAGGAAATTTGGTGA 57.679 42.857 0.00 0.00 0.00 4.02 R
3561 4758 0.535335 GGTATCAGACGCCAGGTTCA 59.465 55.000 0.00 0.00 0.00 3.18 R
4300 5688 1.399744 TAGCTATGGACAGGGGTGCG 61.400 60.000 0.00 0.00 38.35 5.34 R
5063 6566 2.046796 TTTATGGCGGCGCTGACA 60.047 55.556 30.27 30.27 0.00 3.58 R
5537 7043 4.331968 TGGTGTTTGAAGTGTCAGAAACT 58.668 39.130 0.00 0.00 34.49 2.66 R
6266 7775 4.526262 AGTGCAGTGAGTTCATCTCTTACT 59.474 41.667 0.00 0.00 43.13 2.24 R
6324 7835 5.766174 TGGGATTGTTGACCTGTAAAAGTAC 59.234 40.000 0.00 0.00 0.00 2.73 R
6762 8275 0.110486 CAGGGCAAGTAAGGTGGTGT 59.890 55.000 0.00 0.00 0.00 4.16 R
7817 9338 0.109086 CGAGAGAAAGCCGCAAGAGA 60.109 55.000 0.00 0.00 43.02 3.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 8.325477 AGTAAGAGCTCCCTAGTTTAAATGAT 57.675 34.615 10.93 0.00 0.00 2.45
50 51 8.662141 TGATAAATTTAGTTTTAGTGAGCCGTC 58.338 33.333 3.94 0.00 0.00 4.79
63 64 1.734465 GAGCCGTCTCATTTTGACTGG 59.266 52.381 0.00 0.00 39.16 4.00
65 66 1.882352 GCCGTCTCATTTTGACTGGGT 60.882 52.381 0.00 0.00 32.73 4.51
72 73 6.149474 CGTCTCATTTTGACTGGGTTATTCTT 59.851 38.462 0.00 0.00 32.70 2.52
82 83 5.235516 ACTGGGTTATTCTTAGTCAACACG 58.764 41.667 0.00 0.00 0.00 4.49
93 94 1.001633 AGTCAACACGTCACCCATACC 59.998 52.381 0.00 0.00 0.00 2.73
94 95 0.322322 TCAACACGTCACCCATACCC 59.678 55.000 0.00 0.00 0.00 3.69
99 100 2.056223 CGTCACCCATACCCGACCT 61.056 63.158 0.00 0.00 0.00 3.85
106 107 1.048601 CCATACCCGACCTACATGCT 58.951 55.000 0.00 0.00 0.00 3.79
112 113 0.447801 CCGACCTACATGCTTTGTGC 59.552 55.000 0.00 0.00 39.48 4.57
117 118 1.171308 CTACATGCTTTGTGCTGCCT 58.829 50.000 0.00 0.00 43.37 4.75
161 162 2.125912 CACCTCCGCCTCTTGTCG 60.126 66.667 0.00 0.00 0.00 4.35
163 164 4.069232 CCTCCGCCTCTTGTCGCA 62.069 66.667 0.00 0.00 0.00 5.10
168 169 2.393768 CGCCTCTTGTCGCATGCTT 61.394 57.895 17.13 0.00 0.00 3.91
176 177 0.541392 TGTCGCATGCTTCTACCCAT 59.459 50.000 17.13 0.00 0.00 4.00
177 178 0.940126 GTCGCATGCTTCTACCCATG 59.060 55.000 17.13 0.00 41.27 3.66
184 185 0.811616 GCTTCTACCCATGCACTCCG 60.812 60.000 0.00 0.00 0.00 4.63
185 186 0.179073 CTTCTACCCATGCACTCCGG 60.179 60.000 0.00 0.00 0.00 5.14
187 188 3.757248 CTACCCATGCACTCCGGCC 62.757 68.421 0.00 0.00 0.00 6.13
222 223 1.604378 CGCCTCAACTCCCATCCTT 59.396 57.895 0.00 0.00 0.00 3.36
236 237 2.590821 CATCCTTGAATCCCACCATCC 58.409 52.381 0.00 0.00 0.00 3.51
237 238 1.679981 TCCTTGAATCCCACCATCCA 58.320 50.000 0.00 0.00 0.00 3.41
241 242 0.034186 TGAATCCCACCATCCAGTGC 60.034 55.000 0.00 0.00 36.38 4.40
265 266 0.036732 TGCTTCGCCTCAATGTTCCT 59.963 50.000 0.00 0.00 0.00 3.36
268 269 2.704572 CTTCGCCTCAATGTTCCTTCT 58.295 47.619 0.00 0.00 0.00 2.85
270 271 0.449388 CGCCTCAATGTTCCTTCTGC 59.551 55.000 0.00 0.00 0.00 4.26
314 315 2.360801 CCCTGATTCTTCTCTCCGACTC 59.639 54.545 0.00 0.00 0.00 3.36
325 326 3.008594 TCTCTCCGACTCCCTCATCTATC 59.991 52.174 0.00 0.00 0.00 2.08
329 330 1.461512 CGACTCCCTCATCTATCGTCG 59.538 57.143 0.00 0.00 37.13 5.12
351 352 0.401738 CTGGAAGGCTCCTGAACCAA 59.598 55.000 9.69 0.00 41.99 3.67
352 353 0.401738 TGGAAGGCTCCTGAACCAAG 59.598 55.000 0.00 0.00 42.94 3.61
353 354 0.962855 GGAAGGCTCCTGAACCAAGC 60.963 60.000 0.00 0.00 38.88 4.01
354 355 0.250901 GAAGGCTCCTGAACCAAGCA 60.251 55.000 0.00 0.00 37.78 3.91
355 356 0.407139 AAGGCTCCTGAACCAAGCAT 59.593 50.000 0.00 0.00 37.78 3.79
356 357 0.407139 AGGCTCCTGAACCAAGCATT 59.593 50.000 0.00 0.00 37.78 3.56
381 394 0.539051 CAACCACCACCCAAAAAGCA 59.461 50.000 0.00 0.00 0.00 3.91
395 408 2.640581 AAAGCACCTTCCCGCCAACT 62.641 55.000 0.00 0.00 0.00 3.16
396 409 2.597510 GCACCTTCCCGCCAACTT 60.598 61.111 0.00 0.00 0.00 2.66
398 411 2.597510 ACCTTCCCGCCAACTTGC 60.598 61.111 0.00 0.00 0.00 4.01
449 466 8.331742 GTTCGCTTCTATTTTCTTAGATCAAGG 58.668 37.037 0.00 0.00 34.76 3.61
570 589 7.031372 GTGTCACAGAAGTTATACCGAATACA 58.969 38.462 0.00 0.00 0.00 2.29
571 590 7.705325 GTGTCACAGAAGTTATACCGAATACAT 59.295 37.037 0.00 0.00 0.00 2.29
572 591 8.255206 TGTCACAGAAGTTATACCGAATACATT 58.745 33.333 0.00 0.00 0.00 2.71
573 592 9.095065 GTCACAGAAGTTATACCGAATACATTT 57.905 33.333 0.00 0.00 0.00 2.32
574 593 9.661563 TCACAGAAGTTATACCGAATACATTTT 57.338 29.630 0.00 0.00 0.00 1.82
622 641 9.899661 ACTTGTATTTTTGTAGCATATACCTCA 57.100 29.630 0.00 0.00 0.00 3.86
625 644 9.845740 TGTATTTTTGTAGCATATACCTCATGT 57.154 29.630 0.00 0.00 0.00 3.21
629 648 9.853555 TTTTTGTAGCATATACCTCATGTTTTG 57.146 29.630 0.00 0.00 0.00 2.44
630 649 8.574251 TTTGTAGCATATACCTCATGTTTTGT 57.426 30.769 0.00 0.00 0.00 2.83
631 650 8.574251 TTGTAGCATATACCTCATGTTTTGTT 57.426 30.769 0.00 0.00 0.00 2.83
632 651 9.674068 TTGTAGCATATACCTCATGTTTTGTTA 57.326 29.630 0.00 0.00 0.00 2.41
633 652 9.325198 TGTAGCATATACCTCATGTTTTGTTAG 57.675 33.333 0.00 0.00 0.00 2.34
634 653 9.326413 GTAGCATATACCTCATGTTTTGTTAGT 57.674 33.333 0.00 0.00 0.00 2.24
635 654 8.807948 AGCATATACCTCATGTTTTGTTAGTT 57.192 30.769 0.00 0.00 0.00 2.24
636 655 8.677300 AGCATATACCTCATGTTTTGTTAGTTG 58.323 33.333 0.00 0.00 0.00 3.16
637 656 8.458843 GCATATACCTCATGTTTTGTTAGTTGT 58.541 33.333 0.00 0.00 0.00 3.32
677 696 2.985896 TCCAAAATACGAAGAGGCCTG 58.014 47.619 12.00 0.00 0.00 4.85
684 703 6.726490 AAATACGAAGAGGCCTGATAACTA 57.274 37.500 12.00 0.00 0.00 2.24
685 704 6.726490 AATACGAAGAGGCCTGATAACTAA 57.274 37.500 12.00 0.00 0.00 2.24
687 706 5.416271 ACGAAGAGGCCTGATAACTAAAA 57.584 39.130 12.00 0.00 0.00 1.52
720 739 8.831000 ATTTTATCAAAAATAGTAACCGACGC 57.169 30.769 0.00 0.00 42.25 5.19
721 740 6.964741 TTATCAAAAATAGTAACCGACGCA 57.035 33.333 0.00 0.00 0.00 5.24
722 741 7.542534 TTATCAAAAATAGTAACCGACGCAT 57.457 32.000 0.00 0.00 0.00 4.73
723 742 5.211266 TCAAAAATAGTAACCGACGCATG 57.789 39.130 0.00 0.00 0.00 4.06
724 743 4.691685 TCAAAAATAGTAACCGACGCATGT 59.308 37.500 0.00 0.00 0.00 3.21
725 744 5.179742 TCAAAAATAGTAACCGACGCATGTT 59.820 36.000 0.00 0.00 0.00 2.71
726 745 4.852609 AAATAGTAACCGACGCATGTTC 57.147 40.909 0.00 0.00 0.00 3.18
727 746 3.795623 ATAGTAACCGACGCATGTTCT 57.204 42.857 0.00 0.00 0.00 3.01
728 747 1.992170 AGTAACCGACGCATGTTCTC 58.008 50.000 0.00 0.00 0.00 2.87
729 748 1.544691 AGTAACCGACGCATGTTCTCT 59.455 47.619 0.00 0.00 0.00 3.10
730 749 1.654105 GTAACCGACGCATGTTCTCTG 59.346 52.381 0.00 0.00 0.00 3.35
731 750 0.670546 AACCGACGCATGTTCTCTGG 60.671 55.000 0.00 0.00 0.00 3.86
732 751 1.811266 CCGACGCATGTTCTCTGGG 60.811 63.158 0.00 0.00 0.00 4.45
733 752 1.811266 CGACGCATGTTCTCTGGGG 60.811 63.158 0.00 0.00 0.00 4.96
734 753 1.596934 GACGCATGTTCTCTGGGGA 59.403 57.895 0.00 0.00 0.00 4.81
735 754 0.460987 GACGCATGTTCTCTGGGGAG 60.461 60.000 0.00 0.00 40.73 4.30
736 755 1.817099 CGCATGTTCTCTGGGGAGC 60.817 63.158 0.00 0.00 39.31 4.70
737 756 1.300963 GCATGTTCTCTGGGGAGCA 59.699 57.895 0.00 0.00 39.31 4.26
738 757 0.322816 GCATGTTCTCTGGGGAGCAA 60.323 55.000 0.00 0.00 39.31 3.91
739 758 1.457346 CATGTTCTCTGGGGAGCAAC 58.543 55.000 0.00 0.00 39.31 4.17
762 781 2.479198 GCGGACGCTTAAACTGCC 59.521 61.111 9.76 0.00 38.26 4.85
763 782 2.322081 GCGGACGCTTAAACTGCCA 61.322 57.895 9.76 0.00 38.26 4.92
764 783 1.787847 CGGACGCTTAAACTGCCAG 59.212 57.895 0.00 0.00 0.00 4.85
765 784 0.669318 CGGACGCTTAAACTGCCAGA 60.669 55.000 0.00 0.00 0.00 3.86
766 785 0.796927 GGACGCTTAAACTGCCAGAC 59.203 55.000 0.00 0.00 0.00 3.51
767 786 1.508632 GACGCTTAAACTGCCAGACA 58.491 50.000 0.00 0.00 0.00 3.41
768 787 1.871039 GACGCTTAAACTGCCAGACAA 59.129 47.619 0.00 0.00 0.00 3.18
769 788 2.484264 GACGCTTAAACTGCCAGACAAT 59.516 45.455 0.00 0.00 0.00 2.71
770 789 2.484264 ACGCTTAAACTGCCAGACAATC 59.516 45.455 0.00 0.00 0.00 2.67
771 790 2.744202 CGCTTAAACTGCCAGACAATCT 59.256 45.455 0.00 0.00 0.00 2.40
772 791 3.189287 CGCTTAAACTGCCAGACAATCTT 59.811 43.478 0.00 0.00 0.00 2.40
773 792 4.479619 GCTTAAACTGCCAGACAATCTTG 58.520 43.478 0.00 0.00 0.00 3.02
774 793 4.216257 GCTTAAACTGCCAGACAATCTTGA 59.784 41.667 0.00 0.00 0.00 3.02
775 794 5.105997 GCTTAAACTGCCAGACAATCTTGAT 60.106 40.000 0.00 0.00 0.00 2.57
776 795 6.500684 TTAAACTGCCAGACAATCTTGATC 57.499 37.500 0.00 0.00 0.00 2.92
777 796 2.625737 ACTGCCAGACAATCTTGATCG 58.374 47.619 0.00 0.00 0.00 3.69
778 797 2.027745 ACTGCCAGACAATCTTGATCGT 60.028 45.455 0.00 0.00 0.00 3.73
779 798 2.349590 TGCCAGACAATCTTGATCGTG 58.650 47.619 0.00 0.00 0.00 4.35
780 799 1.063174 GCCAGACAATCTTGATCGTGC 59.937 52.381 0.00 0.00 0.00 5.34
781 800 2.349590 CCAGACAATCTTGATCGTGCA 58.650 47.619 0.00 0.00 0.00 4.57
791 810 1.725641 TGATCGTGCACAGATTGGAC 58.274 50.000 18.64 8.88 43.00 4.02
821 840 4.985044 TCCGTTCGAAGTCAAAGAAATC 57.015 40.909 0.00 0.00 0.00 2.17
827 846 6.402550 CGTTCGAAGTCAAAGAAATCCATGAT 60.403 38.462 0.00 0.00 0.00 2.45
857 876 1.644509 AAAAGCCATCCAGTTTCCCC 58.355 50.000 0.00 0.00 0.00 4.81
861 880 0.608130 GCCATCCAGTTTCCCCAAAC 59.392 55.000 0.00 0.00 42.14 2.93
879 898 2.645838 ACACACTGAAACTGCCAGAT 57.354 45.000 0.00 0.00 35.69 2.90
886 905 2.549754 CTGAAACTGCCAGATGAACGTT 59.450 45.455 0.00 0.00 33.65 3.99
903 922 5.121611 TGAACGTTCGCAAATGTCATATCTT 59.878 36.000 22.48 0.00 33.42 2.40
1717 2815 3.063997 GCATTGTGCTATGACTGTACCAC 59.936 47.826 0.00 0.00 40.96 4.16
1753 2851 2.287308 CGAGTCACGGGCAAAATTTTCA 60.287 45.455 0.00 0.00 38.46 2.69
1837 2936 3.120923 GCTGATTTTCAAACCATTGTGCG 60.121 43.478 0.00 0.00 37.79 5.34
1964 3063 5.974156 TGAGGATGATGATTTTGGTCCTA 57.026 39.130 0.00 0.00 36.28 2.94
2477 3579 3.071874 TCAACCCCATCTTGTCACATC 57.928 47.619 0.00 0.00 0.00 3.06
2710 3873 1.067821 GCTCAGTAGATTCTCCACCCG 59.932 57.143 0.00 0.00 0.00 5.28
2802 3965 4.402155 TGTTTGTTTCTTGCTTCTCCATGT 59.598 37.500 0.00 0.00 0.00 3.21
2984 4150 1.971357 TCTTCTGGACAACTCCCTGTC 59.029 52.381 0.00 0.00 44.21 3.51
3000 4166 2.363795 TCGAGGAACGATGCCCCT 60.364 61.111 0.00 0.00 46.45 4.79
3188 4379 0.732571 CAACAAGCAACACGACCTGT 59.267 50.000 0.00 0.00 32.89 4.00
3210 4403 1.958902 CTCCTGCCTCTCCAGTCAGC 61.959 65.000 0.00 0.00 0.00 4.26
3404 4597 0.546267 TCCTCCTCTGCTGCCTTCTT 60.546 55.000 0.00 0.00 0.00 2.52
3428 4624 2.985456 CACAGCCTCACCTCCTCC 59.015 66.667 0.00 0.00 0.00 4.30
3429 4625 1.611851 CACAGCCTCACCTCCTCCT 60.612 63.158 0.00 0.00 0.00 3.69
3430 4626 1.305718 ACAGCCTCACCTCCTCCTC 60.306 63.158 0.00 0.00 0.00 3.71
3526 4722 4.827087 CTGCCGCTGATCCGTGCT 62.827 66.667 0.00 0.00 0.00 4.40
3561 4758 3.374402 CGTCTGTCAGGTCCCGCT 61.374 66.667 0.00 0.00 0.00 5.52
3621 4818 0.166597 CGTACCAGCTCGTGTTCGTA 59.833 55.000 0.00 0.00 38.33 3.43
3687 4884 6.014771 TCCTCTTCTAGGTCTAGCACATAA 57.985 41.667 0.34 0.00 46.62 1.90
3688 4885 6.432581 TCCTCTTCTAGGTCTAGCACATAAA 58.567 40.000 0.34 0.00 46.62 1.40
3840 5037 9.821240 TTGCCCCTATATGTACAATATTTTGAT 57.179 29.630 0.00 0.00 36.64 2.57
3915 5118 6.507900 AGACTGTCATACACTTTCCATATCG 58.492 40.000 10.88 0.00 0.00 2.92
3934 5137 5.895636 ATCGAAAAATATGTCCTGCAACA 57.104 34.783 0.00 0.00 0.00 3.33
3936 5139 6.993786 TCGAAAAATATGTCCTGCAACATA 57.006 33.333 12.45 12.45 44.07 2.29
3959 5162 2.429610 ACATACCGCCGATCCCATATAC 59.570 50.000 0.00 0.00 0.00 1.47
3969 5172 6.281405 GCCGATCCCATATACTACCTTATTG 58.719 44.000 0.00 0.00 0.00 1.90
4083 5286 7.472334 AGCACATTTATCAGTGATTTTCCTT 57.528 32.000 11.68 0.00 37.97 3.36
4117 5320 2.340210 TGAAGCTGTACTTTGTGCCA 57.660 45.000 0.00 0.00 39.29 4.92
4129 5332 0.888736 TTGTGCCAGGACCATGTTCG 60.889 55.000 0.00 0.00 0.00 3.95
4289 5677 0.918258 TGGCTCTGGCACATGGATAA 59.082 50.000 0.00 0.00 38.20 1.75
4300 5688 3.428045 GCACATGGATAACAAGCTTCCAC 60.428 47.826 6.22 0.00 42.09 4.02
4391 5779 3.370527 CCATGTCAAATTCGGTCTACCCT 60.371 47.826 0.00 0.00 0.00 4.34
4415 5803 2.158986 CCTCTCTTGACATTCTCCGCAT 60.159 50.000 0.00 0.00 0.00 4.73
4489 5877 4.096984 GGGAGATGTTGATCGCTTTTCATT 59.903 41.667 0.00 0.00 33.34 2.57
4557 5946 7.756722 GCTCACAAAATTTGCTATCACATAGTT 59.243 33.333 5.52 0.00 35.29 2.24
4610 5999 9.829507 AAAAGTGGTTTGTGAATGAAATAATGA 57.170 25.926 0.00 0.00 0.00 2.57
4917 6306 6.869206 TTCTATCAGGGTTAACTAGCAAGT 57.131 37.500 5.42 0.00 37.65 3.16
4918 6307 7.966339 TTCTATCAGGGTTAACTAGCAAGTA 57.034 36.000 5.42 0.00 33.75 2.24
5063 6566 4.615912 CGCCATCTTTTGACTTTTCGGATT 60.616 41.667 0.00 0.00 0.00 3.01
5091 6594 3.554337 CGCCGCCATAAACTCTATAACCT 60.554 47.826 0.00 0.00 0.00 3.50
5159 6662 7.732140 TCATAGATGATCAAACATACTCCCTCT 59.268 37.037 0.00 0.00 0.00 3.69
5164 6667 4.188247 TCAAACATACTCCCTCTGTTCG 57.812 45.455 0.00 0.00 32.18 3.95
5307 6810 8.315220 AGACTTATATTTAGGAACGAAGGGAA 57.685 34.615 0.00 0.00 0.00 3.97
5434 6939 9.620259 TGCTTTATGGGTAATTTCTTTGTTTTT 57.380 25.926 0.00 0.00 0.00 1.94
6324 7835 8.800231 TCATTGATGTACTCACACAAATTTTG 57.200 30.769 7.59 7.59 37.54 2.44
6587 8100 6.408035 TGAGGGACGTTTGCAGTTATATTTA 58.592 36.000 0.00 0.00 0.00 1.40
6588 8101 6.537301 TGAGGGACGTTTGCAGTTATATTTAG 59.463 38.462 0.00 0.00 0.00 1.85
6589 8102 5.820947 AGGGACGTTTGCAGTTATATTTAGG 59.179 40.000 0.00 0.00 0.00 2.69
6590 8103 5.008316 GGGACGTTTGCAGTTATATTTAGGG 59.992 44.000 0.00 0.00 0.00 3.53
6591 8104 5.008316 GGACGTTTGCAGTTATATTTAGGGG 59.992 44.000 0.00 0.00 0.00 4.79
6592 8105 4.885325 ACGTTTGCAGTTATATTTAGGGGG 59.115 41.667 0.00 0.00 0.00 5.40
6593 8106 4.885325 CGTTTGCAGTTATATTTAGGGGGT 59.115 41.667 0.00 0.00 0.00 4.95
6594 8107 5.220970 CGTTTGCAGTTATATTTAGGGGGTG 60.221 44.000 0.00 0.00 0.00 4.61
6595 8108 5.459982 TTGCAGTTATATTTAGGGGGTGT 57.540 39.130 0.00 0.00 0.00 4.16
6596 8109 5.459982 TGCAGTTATATTTAGGGGGTGTT 57.540 39.130 0.00 0.00 0.00 3.32
6597 8110 5.833340 TGCAGTTATATTTAGGGGGTGTTT 58.167 37.500 0.00 0.00 0.00 2.83
6598 8111 5.654650 TGCAGTTATATTTAGGGGGTGTTTG 59.345 40.000 0.00 0.00 0.00 2.93
6599 8112 5.068591 GCAGTTATATTTAGGGGGTGTTTGG 59.931 44.000 0.00 0.00 0.00 3.28
6600 8113 6.192044 CAGTTATATTTAGGGGGTGTTTGGT 58.808 40.000 0.00 0.00 0.00 3.67
6601 8114 6.666113 CAGTTATATTTAGGGGGTGTTTGGTT 59.334 38.462 0.00 0.00 0.00 3.67
6602 8115 6.893554 AGTTATATTTAGGGGGTGTTTGGTTC 59.106 38.462 0.00 0.00 0.00 3.62
6603 8116 2.385135 TTTAGGGGGTGTTTGGTTCC 57.615 50.000 0.00 0.00 0.00 3.62
6604 8117 1.232909 TTAGGGGGTGTTTGGTTCCA 58.767 50.000 0.00 0.00 0.00 3.53
6605 8118 0.774908 TAGGGGGTGTTTGGTTCCAG 59.225 55.000 0.00 0.00 0.00 3.86
6606 8119 1.533033 GGGGGTGTTTGGTTCCAGG 60.533 63.158 0.00 0.00 0.00 4.45
6607 8120 1.533033 GGGGTGTTTGGTTCCAGGG 60.533 63.158 0.00 0.00 0.00 4.45
6608 8121 1.539665 GGGTGTTTGGTTCCAGGGA 59.460 57.895 0.00 0.00 0.00 4.20
6609 8122 0.826256 GGGTGTTTGGTTCCAGGGAC 60.826 60.000 0.00 0.00 0.00 4.46
6610 8123 0.185175 GGTGTTTGGTTCCAGGGACT 59.815 55.000 0.00 0.00 43.88 3.85
6611 8124 1.411074 GGTGTTTGGTTCCAGGGACTT 60.411 52.381 0.00 0.00 34.60 3.01
6612 8125 2.384828 GTGTTTGGTTCCAGGGACTTT 58.615 47.619 0.00 0.00 34.60 2.66
6613 8126 2.764010 GTGTTTGGTTCCAGGGACTTTT 59.236 45.455 0.00 0.00 34.60 2.27
6614 8127 3.196901 GTGTTTGGTTCCAGGGACTTTTT 59.803 43.478 0.00 0.00 34.60 1.94
6652 8165 4.571369 AAAGTCCCTAAAAGTCCCTAGC 57.429 45.455 0.00 0.00 0.00 3.42
6653 8166 3.200958 AGTCCCTAAAAGTCCCTAGCA 57.799 47.619 0.00 0.00 0.00 3.49
6654 8167 3.527937 AGTCCCTAAAAGTCCCTAGCAA 58.472 45.455 0.00 0.00 0.00 3.91
6655 8168 3.914435 AGTCCCTAAAAGTCCCTAGCAAA 59.086 43.478 0.00 0.00 0.00 3.68
6656 8169 4.008330 GTCCCTAAAAGTCCCTAGCAAAC 58.992 47.826 0.00 0.00 0.00 2.93
6657 8170 3.009805 TCCCTAAAAGTCCCTAGCAAACC 59.990 47.826 0.00 0.00 0.00 3.27
6658 8171 3.245122 CCCTAAAAGTCCCTAGCAAACCA 60.245 47.826 0.00 0.00 0.00 3.67
6659 8172 4.403734 CCTAAAAGTCCCTAGCAAACCAA 58.596 43.478 0.00 0.00 0.00 3.67
6660 8173 4.830600 CCTAAAAGTCCCTAGCAAACCAAA 59.169 41.667 0.00 0.00 0.00 3.28
6661 8174 4.665833 AAAAGTCCCTAGCAAACCAAAC 57.334 40.909 0.00 0.00 0.00 2.93
6662 8175 3.306472 AAGTCCCTAGCAAACCAAACA 57.694 42.857 0.00 0.00 0.00 2.83
6663 8176 2.863809 AGTCCCTAGCAAACCAAACAG 58.136 47.619 0.00 0.00 0.00 3.16
6664 8177 1.886542 GTCCCTAGCAAACCAAACAGG 59.113 52.381 0.00 0.00 45.67 4.00
6665 8178 1.203001 TCCCTAGCAAACCAAACAGGG 60.203 52.381 0.00 0.00 43.52 4.45
6666 8179 1.203001 CCCTAGCAAACCAAACAGGGA 60.203 52.381 0.00 0.00 44.71 4.20
6667 8180 2.162681 CCTAGCAAACCAAACAGGGAG 58.837 52.381 0.00 0.00 43.89 4.30
6668 8181 2.162681 CTAGCAAACCAAACAGGGAGG 58.837 52.381 0.00 0.00 43.89 4.30
6669 8182 0.469892 AGCAAACCAAACAGGGAGGG 60.470 55.000 0.00 0.00 43.89 4.30
6670 8183 0.469144 GCAAACCAAACAGGGAGGGA 60.469 55.000 0.00 0.00 43.89 4.20
6671 8184 1.328279 CAAACCAAACAGGGAGGGAC 58.672 55.000 0.00 0.00 43.89 4.46
6672 8185 1.133482 CAAACCAAACAGGGAGGGACT 60.133 52.381 0.00 0.00 43.89 3.85
6673 8186 1.231963 AACCAAACAGGGAGGGACTT 58.768 50.000 0.00 0.00 43.89 3.01
6674 8187 1.231963 ACCAAACAGGGAGGGACTTT 58.768 50.000 0.00 0.00 43.89 2.66
6675 8188 1.573857 ACCAAACAGGGAGGGACTTTT 59.426 47.619 0.00 0.00 43.89 2.27
6676 8189 2.023404 ACCAAACAGGGAGGGACTTTTT 60.023 45.455 0.00 0.00 43.89 1.94
6677 8190 2.365293 CCAAACAGGGAGGGACTTTTTG 59.635 50.000 0.00 0.00 41.55 2.44
6678 8191 1.704641 AACAGGGAGGGACTTTTTGC 58.295 50.000 0.00 0.00 41.55 3.68
6679 8192 0.853530 ACAGGGAGGGACTTTTTGCT 59.146 50.000 0.00 0.00 41.55 3.91
6680 8193 2.062636 ACAGGGAGGGACTTTTTGCTA 58.937 47.619 0.00 0.00 41.55 3.49
6681 8194 2.445525 ACAGGGAGGGACTTTTTGCTAA 59.554 45.455 0.00 0.00 41.55 3.09
6682 8195 3.117284 ACAGGGAGGGACTTTTTGCTAAA 60.117 43.478 0.00 0.00 41.55 1.85
6683 8196 3.895041 CAGGGAGGGACTTTTTGCTAAAA 59.105 43.478 5.93 5.93 41.55 1.52
6695 8208 7.859613 CTTTTTGCTAAAAGTCCTTAGAAGC 57.140 36.000 20.79 0.00 43.34 3.86
6696 8209 6.952773 TTTTGCTAAAAGTCCTTAGAAGCA 57.047 33.333 6.73 6.73 31.59 3.91
6697 8210 5.941948 TTGCTAAAAGTCCTTAGAAGCAC 57.058 39.130 9.21 0.00 31.59 4.40
6698 8211 4.324267 TGCTAAAAGTCCTTAGAAGCACC 58.676 43.478 6.73 0.00 31.59 5.01
6699 8212 4.041691 TGCTAAAAGTCCTTAGAAGCACCT 59.958 41.667 6.73 0.00 31.59 4.00
6700 8213 4.632251 GCTAAAAGTCCTTAGAAGCACCTC 59.368 45.833 0.00 0.00 31.59 3.85
6701 8214 3.704800 AAAGTCCTTAGAAGCACCTCC 57.295 47.619 0.00 0.00 0.00 4.30
6702 8215 2.632763 AGTCCTTAGAAGCACCTCCT 57.367 50.000 0.00 0.00 0.00 3.69
6703 8216 2.909217 AGTCCTTAGAAGCACCTCCTT 58.091 47.619 0.00 0.00 0.00 3.36
6704 8217 2.569404 AGTCCTTAGAAGCACCTCCTTG 59.431 50.000 0.00 0.00 0.00 3.61
6705 8218 2.567615 GTCCTTAGAAGCACCTCCTTGA 59.432 50.000 0.00 0.00 0.00 3.02
6706 8219 2.834549 TCCTTAGAAGCACCTCCTTGAG 59.165 50.000 0.00 0.00 0.00 3.02
6707 8220 2.834549 CCTTAGAAGCACCTCCTTGAGA 59.165 50.000 0.00 0.00 0.00 3.27
6708 8221 3.118811 CCTTAGAAGCACCTCCTTGAGAG 60.119 52.174 0.00 0.00 42.83 3.20
6709 8222 2.022718 AGAAGCACCTCCTTGAGAGT 57.977 50.000 0.00 0.00 41.47 3.24
6710 8223 1.899142 AGAAGCACCTCCTTGAGAGTC 59.101 52.381 0.00 0.00 41.47 3.36
6711 8224 1.899142 GAAGCACCTCCTTGAGAGTCT 59.101 52.381 0.00 0.00 41.47 3.24
6712 8225 2.022718 AGCACCTCCTTGAGAGTCTT 57.977 50.000 0.00 0.00 41.47 3.01
6713 8226 2.334023 AGCACCTCCTTGAGAGTCTTT 58.666 47.619 0.00 0.00 41.47 2.52
6714 8227 2.708325 AGCACCTCCTTGAGAGTCTTTT 59.292 45.455 0.00 0.00 41.47 2.27
6715 8228 3.137360 AGCACCTCCTTGAGAGTCTTTTT 59.863 43.478 0.00 0.00 41.47 1.94
6716 8229 3.500299 GCACCTCCTTGAGAGTCTTTTTC 59.500 47.826 0.00 0.00 41.47 2.29
6717 8230 4.708177 CACCTCCTTGAGAGTCTTTTTCA 58.292 43.478 0.00 0.00 41.47 2.69
6718 8231 5.126067 CACCTCCTTGAGAGTCTTTTTCAA 58.874 41.667 0.00 0.00 41.47 2.69
6719 8232 5.590259 CACCTCCTTGAGAGTCTTTTTCAAA 59.410 40.000 0.00 0.00 41.47 2.69
6720 8233 6.095440 CACCTCCTTGAGAGTCTTTTTCAAAA 59.905 38.462 0.00 0.00 41.47 2.44
6721 8234 6.663523 ACCTCCTTGAGAGTCTTTTTCAAAAA 59.336 34.615 0.00 0.00 41.47 1.94
6722 8235 7.148000 ACCTCCTTGAGAGTCTTTTTCAAAAAG 60.148 37.037 15.46 15.46 41.47 2.27
6723 8236 7.148000 CCTCCTTGAGAGTCTTTTTCAAAAAGT 60.148 37.037 19.82 4.20 41.47 2.66
6724 8237 7.762382 TCCTTGAGAGTCTTTTTCAAAAAGTC 58.238 34.615 19.82 15.25 31.11 3.01
6725 8238 6.975197 CCTTGAGAGTCTTTTTCAAAAAGTCC 59.025 38.462 19.82 12.77 31.11 3.85
6726 8239 7.148000 CCTTGAGAGTCTTTTTCAAAAAGTCCT 60.148 37.037 19.82 16.49 31.11 3.85
6727 8240 8.801882 TTGAGAGTCTTTTTCAAAAAGTCCTA 57.198 30.769 19.82 0.61 0.00 2.94
6728 8241 8.438676 TGAGAGTCTTTTTCAAAAAGTCCTAG 57.561 34.615 19.82 0.00 0.00 3.02
6729 8242 7.499232 TGAGAGTCTTTTTCAAAAAGTCCTAGG 59.501 37.037 19.82 0.82 0.00 3.02
6730 8243 6.773200 AGAGTCTTTTTCAAAAAGTCCTAGGG 59.227 38.462 19.82 0.00 0.00 3.53
6731 8244 6.669631 AGTCTTTTTCAAAAAGTCCTAGGGA 58.330 36.000 19.82 0.00 0.00 4.20
6763 8276 5.327616 GTCCTAGGACTAGAGAACCAAAC 57.672 47.826 31.12 3.26 41.57 2.93
6764 8277 4.771054 GTCCTAGGACTAGAGAACCAAACA 59.229 45.833 31.12 0.00 41.57 2.83
6765 8278 4.771054 TCCTAGGACTAGAGAACCAAACAC 59.229 45.833 7.62 0.00 35.21 3.32
6766 8279 4.081586 CCTAGGACTAGAGAACCAAACACC 60.082 50.000 1.05 0.00 35.21 4.16
6767 8280 3.314693 AGGACTAGAGAACCAAACACCA 58.685 45.455 0.00 0.00 0.00 4.17
6768 8281 3.071167 AGGACTAGAGAACCAAACACCAC 59.929 47.826 0.00 0.00 0.00 4.16
6769 8282 3.400255 GACTAGAGAACCAAACACCACC 58.600 50.000 0.00 0.00 0.00 4.61
6770 8283 3.046374 ACTAGAGAACCAAACACCACCT 58.954 45.455 0.00 0.00 0.00 4.00
6771 8284 3.458487 ACTAGAGAACCAAACACCACCTT 59.542 43.478 0.00 0.00 0.00 3.50
7421 8939 2.001357 CATGACATGACCTCGTGCG 58.999 57.895 10.03 0.00 36.36 5.34
7611 9132 7.526142 TGTAAATACAAATACCAAGTTGGCA 57.474 32.000 22.25 9.92 35.39 4.92
7618 9139 2.584835 TACCAAGTTGGCAGCTGAAT 57.415 45.000 22.25 2.14 42.67 2.57
7643 9164 1.411977 GCTCAGGATGCTTCAGCTCTA 59.588 52.381 7.50 0.00 42.66 2.43
7644 9165 2.802774 GCTCAGGATGCTTCAGCTCTAC 60.803 54.545 7.50 0.00 42.66 2.59
7654 9175 3.499918 GCTTCAGCTCTACATGTGTTGTT 59.500 43.478 9.11 0.00 37.66 2.83
7673 9194 7.009174 GTGTTGTTATTTGTCAGGTTTGAACAG 59.991 37.037 0.00 0.00 34.49 3.16
7685 9206 9.052759 GTCAGGTTTGAACAGAATTCTAAACTA 57.947 33.333 22.03 11.48 31.37 2.24
7686 9207 9.793259 TCAGGTTTGAACAGAATTCTAAACTAT 57.207 29.630 22.03 13.45 31.37 2.12
7687 9208 9.831737 CAGGTTTGAACAGAATTCTAAACTATG 57.168 33.333 22.03 18.32 31.37 2.23
7688 9209 9.014297 AGGTTTGAACAGAATTCTAAACTATGG 57.986 33.333 22.03 7.33 31.37 2.74
7689 9210 9.010029 GGTTTGAACAGAATTCTAAACTATGGA 57.990 33.333 22.03 0.23 0.00 3.41
7691 9212 7.849804 TGAACAGAATTCTAAACTATGGAGC 57.150 36.000 7.86 0.00 0.00 4.70
7692 9213 7.394016 TGAACAGAATTCTAAACTATGGAGCA 58.606 34.615 7.86 0.00 0.00 4.26
7693 9214 7.550551 TGAACAGAATTCTAAACTATGGAGCAG 59.449 37.037 7.86 0.00 0.00 4.24
7694 9215 6.352516 ACAGAATTCTAAACTATGGAGCAGG 58.647 40.000 7.86 0.00 0.00 4.85
7695 9216 5.238214 CAGAATTCTAAACTATGGAGCAGGC 59.762 44.000 7.86 0.00 0.00 4.85
7696 9217 2.890808 TCTAAACTATGGAGCAGGCG 57.109 50.000 0.00 0.00 0.00 5.52
7697 9218 2.384828 TCTAAACTATGGAGCAGGCGA 58.615 47.619 0.00 0.00 0.00 5.54
7698 9219 2.100916 TCTAAACTATGGAGCAGGCGAC 59.899 50.000 0.00 0.00 0.00 5.19
7699 9220 0.613260 AAACTATGGAGCAGGCGACA 59.387 50.000 0.00 0.00 0.00 4.35
7700 9221 0.108138 AACTATGGAGCAGGCGACAC 60.108 55.000 0.00 0.00 0.00 3.67
7701 9222 1.257750 ACTATGGAGCAGGCGACACA 61.258 55.000 0.00 0.00 0.00 3.72
7702 9223 0.108186 CTATGGAGCAGGCGACACAA 60.108 55.000 0.00 0.00 0.00 3.33
7703 9224 0.391130 TATGGAGCAGGCGACACAAC 60.391 55.000 0.00 0.00 0.00 3.32
7704 9225 3.050275 GGAGCAGGCGACACAACC 61.050 66.667 0.00 0.00 0.00 3.77
7705 9226 3.050275 GAGCAGGCGACACAACCC 61.050 66.667 0.00 0.00 0.00 4.11
7706 9227 3.537206 GAGCAGGCGACACAACCCT 62.537 63.158 0.00 0.00 0.00 4.34
7707 9228 3.050275 GCAGGCGACACAACCCTC 61.050 66.667 0.00 0.00 0.00 4.30
7708 9229 2.358737 CAGGCGACACAACCCTCC 60.359 66.667 0.00 0.00 0.00 4.30
7709 9230 3.637273 AGGCGACACAACCCTCCC 61.637 66.667 0.00 0.00 0.00 4.30
7710 9231 4.717313 GGCGACACAACCCTCCCC 62.717 72.222 0.00 0.00 0.00 4.81
7711 9232 3.637273 GCGACACAACCCTCCCCT 61.637 66.667 0.00 0.00 0.00 4.79
7712 9233 2.347490 CGACACAACCCTCCCCTG 59.653 66.667 0.00 0.00 0.00 4.45
7713 9234 2.034221 GACACAACCCTCCCCTGC 59.966 66.667 0.00 0.00 0.00 4.85
7714 9235 3.901797 GACACAACCCTCCCCTGCG 62.902 68.421 0.00 0.00 0.00 5.18
7715 9236 3.636231 CACAACCCTCCCCTGCGA 61.636 66.667 0.00 0.00 0.00 5.10
7716 9237 3.322466 ACAACCCTCCCCTGCGAG 61.322 66.667 0.00 0.00 0.00 5.03
7717 9238 3.003173 CAACCCTCCCCTGCGAGA 61.003 66.667 0.00 0.00 30.97 4.04
7718 9239 2.203938 AACCCTCCCCTGCGAGAA 60.204 61.111 0.00 0.00 30.97 2.87
7719 9240 1.846124 AACCCTCCCCTGCGAGAAA 60.846 57.895 0.00 0.00 30.97 2.52
7720 9241 2.125766 AACCCTCCCCTGCGAGAAAC 62.126 60.000 0.00 0.00 30.97 2.78
7721 9242 2.294078 CCCTCCCCTGCGAGAAACT 61.294 63.158 0.00 0.00 30.97 2.66
7722 9243 1.078848 CCTCCCCTGCGAGAAACTG 60.079 63.158 0.00 0.00 30.97 3.16
7723 9244 1.544825 CCTCCCCTGCGAGAAACTGA 61.545 60.000 0.00 0.00 30.97 3.41
7724 9245 0.321671 CTCCCCTGCGAGAAACTGAA 59.678 55.000 0.00 0.00 30.97 3.02
7725 9246 0.321671 TCCCCTGCGAGAAACTGAAG 59.678 55.000 0.00 0.00 0.00 3.02
7726 9247 1.301677 CCCCTGCGAGAAACTGAAGC 61.302 60.000 0.00 0.00 0.00 3.86
7727 9248 0.321122 CCCTGCGAGAAACTGAAGCT 60.321 55.000 0.00 0.00 0.00 3.74
7728 9249 1.517242 CCTGCGAGAAACTGAAGCTT 58.483 50.000 0.00 0.00 0.00 3.74
7729 9250 1.196354 CCTGCGAGAAACTGAAGCTTG 59.804 52.381 2.10 0.00 0.00 4.01
7730 9251 2.138320 CTGCGAGAAACTGAAGCTTGA 58.862 47.619 2.10 0.00 0.00 3.02
7731 9252 1.867233 TGCGAGAAACTGAAGCTTGAC 59.133 47.619 2.10 0.00 0.00 3.18
7732 9253 1.136502 GCGAGAAACTGAAGCTTGACG 60.137 52.381 2.10 0.00 0.00 4.35
7733 9254 1.136502 CGAGAAACTGAAGCTTGACGC 60.137 52.381 2.10 0.00 39.57 5.19
7757 9278 2.988010 TTCCTCCCATCAGTTCATCG 57.012 50.000 0.00 0.00 0.00 3.84
7758 9279 0.465705 TCCTCCCATCAGTTCATCGC 59.534 55.000 0.00 0.00 0.00 4.58
7759 9280 0.467384 CCTCCCATCAGTTCATCGCT 59.533 55.000 0.00 0.00 0.00 4.93
7760 9281 1.688735 CCTCCCATCAGTTCATCGCTA 59.311 52.381 0.00 0.00 0.00 4.26
7761 9282 2.103094 CCTCCCATCAGTTCATCGCTAA 59.897 50.000 0.00 0.00 0.00 3.09
7762 9283 3.388308 CTCCCATCAGTTCATCGCTAAG 58.612 50.000 0.00 0.00 0.00 2.18
7763 9284 2.103094 TCCCATCAGTTCATCGCTAAGG 59.897 50.000 0.00 0.00 0.00 2.69
7764 9285 2.158900 CCCATCAGTTCATCGCTAAGGT 60.159 50.000 0.00 0.00 0.00 3.50
7765 9286 3.126831 CCATCAGTTCATCGCTAAGGTC 58.873 50.000 0.00 0.00 0.00 3.85
7766 9287 2.561733 TCAGTTCATCGCTAAGGTCG 57.438 50.000 0.00 0.00 0.00 4.79
7767 9288 2.089201 TCAGTTCATCGCTAAGGTCGA 58.911 47.619 0.00 0.00 40.45 4.20
7768 9289 2.688446 TCAGTTCATCGCTAAGGTCGAT 59.312 45.455 0.00 0.00 46.27 3.59
7769 9290 3.881089 TCAGTTCATCGCTAAGGTCGATA 59.119 43.478 0.00 0.00 43.87 2.92
7770 9291 4.023963 TCAGTTCATCGCTAAGGTCGATAG 60.024 45.833 0.00 0.00 43.87 2.08
7771 9292 3.253677 AGTTCATCGCTAAGGTCGATAGG 59.746 47.826 0.00 0.00 43.87 2.57
7772 9293 2.160205 TCATCGCTAAGGTCGATAGGG 58.840 52.381 2.97 2.97 43.87 3.53
7773 9294 1.887198 CATCGCTAAGGTCGATAGGGT 59.113 52.381 8.05 0.00 43.87 4.34
7774 9295 2.062971 TCGCTAAGGTCGATAGGGTT 57.937 50.000 8.05 0.00 35.49 4.11
7775 9296 1.679680 TCGCTAAGGTCGATAGGGTTG 59.320 52.381 8.05 0.00 35.49 3.77
7776 9297 1.269621 CGCTAAGGTCGATAGGGTTGG 60.270 57.143 0.00 0.00 0.00 3.77
7777 9298 1.070289 GCTAAGGTCGATAGGGTTGGG 59.930 57.143 0.00 0.00 0.00 4.12
7778 9299 1.070289 CTAAGGTCGATAGGGTTGGGC 59.930 57.143 0.00 0.00 0.00 5.36
7779 9300 1.968050 AAGGTCGATAGGGTTGGGCG 61.968 60.000 0.00 0.00 0.00 6.13
7780 9301 2.108362 GTCGATAGGGTTGGGCGG 59.892 66.667 0.00 0.00 0.00 6.13
7781 9302 2.364579 TCGATAGGGTTGGGCGGT 60.365 61.111 0.00 0.00 0.00 5.68
7782 9303 2.108362 CGATAGGGTTGGGCGGTC 59.892 66.667 0.00 0.00 0.00 4.79
7783 9304 2.509422 GATAGGGTTGGGCGGTCC 59.491 66.667 0.00 0.00 0.00 4.46
7784 9305 2.285818 ATAGGGTTGGGCGGTCCA 60.286 61.111 0.00 0.00 45.43 4.02
7791 9312 3.074281 TGGGCGGTCCAACCTTAG 58.926 61.111 0.00 0.00 43.84 2.18
7792 9313 2.437895 GGGCGGTCCAACCTTAGC 60.438 66.667 0.00 0.00 35.66 3.09
7793 9314 2.818274 GGCGGTCCAACCTTAGCG 60.818 66.667 0.00 0.00 35.66 4.26
7794 9315 2.263540 GCGGTCCAACCTTAGCGA 59.736 61.111 0.00 0.00 38.82 4.93
7795 9316 1.153429 GCGGTCCAACCTTAGCGAT 60.153 57.895 0.00 0.00 38.82 4.58
7796 9317 1.429148 GCGGTCCAACCTTAGCGATG 61.429 60.000 0.00 0.00 38.82 3.84
7797 9318 0.174845 CGGTCCAACCTTAGCGATGA 59.825 55.000 0.00 0.00 38.82 2.92
7798 9319 1.802880 CGGTCCAACCTTAGCGATGAG 60.803 57.143 0.00 0.00 38.82 2.90
7799 9320 2.074826 GGTCCAACCTTAGCGATGAGC 61.075 57.143 0.00 0.00 40.01 4.26
7815 9336 2.899339 GCTGATGCTCTTCGGGGC 60.899 66.667 0.00 0.00 36.03 5.80
7816 9337 2.586245 CTGATGCTCTTCGGGGCA 59.414 61.111 0.00 0.00 42.80 5.36
7819 9340 3.652687 ATGCTCTTCGGGGCATCT 58.347 55.556 0.00 0.00 44.58 2.90
7820 9341 1.449353 ATGCTCTTCGGGGCATCTC 59.551 57.895 0.00 0.00 44.58 2.75
7821 9342 1.053264 ATGCTCTTCGGGGCATCTCT 61.053 55.000 0.00 0.00 44.58 3.10
7822 9343 1.267574 TGCTCTTCGGGGCATCTCTT 61.268 55.000 0.00 0.00 33.23 2.85
7823 9344 0.813210 GCTCTTCGGGGCATCTCTTG 60.813 60.000 0.00 0.00 0.00 3.02
7832 9353 2.475666 GCATCTCTTGCGGCTTTCT 58.524 52.632 0.00 0.00 42.54 2.52
7833 9354 0.376502 GCATCTCTTGCGGCTTTCTC 59.623 55.000 0.00 0.00 42.54 2.87
7834 9355 2.011046 GCATCTCTTGCGGCTTTCTCT 61.011 52.381 0.00 0.00 42.54 3.10
7900 9421 5.069781 TGCCTGCCTTTAACATAGTGTTTTT 59.930 36.000 0.20 0.00 41.45 1.94
8003 9524 2.182827 TGTCCAGAGGAGGATCAACAG 58.817 52.381 0.00 0.00 40.42 3.16
8050 9571 2.048222 TCTGAGCGAAACGGCTGG 60.048 61.111 0.00 0.00 44.93 4.85
8238 9779 5.122239 TCGTTATTACTTTTCGAGTCCGAGA 59.878 40.000 0.00 0.00 46.39 4.04
8329 11643 5.414765 ACAAAGTTCTGTTCTCCTTTCGTTT 59.585 36.000 0.00 0.00 0.00 3.60
8355 11669 7.716612 TCTTCTTTCTTTTCTTTTTGCCTAGG 58.283 34.615 3.67 3.67 0.00 3.02
8366 11680 0.038251 TTGCCTAGGCGATCATAGCG 60.038 55.000 28.28 0.00 45.51 4.26
8370 11684 1.169577 CTAGGCGATCATAGCGTCCT 58.830 55.000 0.00 0.00 38.30 3.85
8429 11743 2.998670 CAGTGTAACACTCTGCTCCATG 59.001 50.000 3.49 0.00 43.43 3.66
8498 11812 0.684535 TGGGATGTTGAGCTCGTGAA 59.315 50.000 9.64 0.00 0.00 3.18
8532 11846 6.148976 TCTGTGAAGAAGATGCAAAAGAGATG 59.851 38.462 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 7.874016 TGAGACGGCTCACTAAAACTAAATTTA 59.126 33.333 19.45 0.00 45.88 1.40
30 31 5.790593 TGAGACGGCTCACTAAAACTAAAT 58.209 37.500 19.45 0.00 45.88 1.40
50 51 8.567285 ACTAAGAATAACCCAGTCAAAATGAG 57.433 34.615 0.00 0.00 0.00 2.90
63 64 5.119743 GGTGACGTGTTGACTAAGAATAACC 59.880 44.000 0.00 0.00 0.00 2.85
65 66 5.221481 TGGGTGACGTGTTGACTAAGAATAA 60.221 40.000 0.00 0.00 0.00 1.40
72 73 2.231964 GGTATGGGTGACGTGTTGACTA 59.768 50.000 0.00 0.00 0.00 2.59
82 83 0.749049 GTAGGTCGGGTATGGGTGAC 59.251 60.000 0.00 0.00 0.00 3.67
93 94 0.447801 GCACAAAGCATGTAGGTCGG 59.552 55.000 0.00 0.00 41.46 4.79
94 95 3.975992 GCACAAAGCATGTAGGTCG 57.024 52.632 0.00 0.00 41.46 4.79
106 107 2.671619 GCGGGTAGGCAGCACAAA 60.672 61.111 0.00 0.00 0.00 2.83
112 113 4.849329 GTCGACGCGGGTAGGCAG 62.849 72.222 12.47 0.00 0.00 4.85
131 132 4.954118 AGGTGGACCGGTGGAGCA 62.954 66.667 14.63 0.00 42.08 4.26
146 147 3.376935 ATGCGACAAGAGGCGGAGG 62.377 63.158 0.00 0.00 0.00 4.30
163 164 1.133976 GGAGTGCATGGGTAGAAGCAT 60.134 52.381 0.00 0.00 39.43 3.79
168 169 2.731571 GCCGGAGTGCATGGGTAGA 61.732 63.158 5.05 0.00 0.00 2.59
206 207 3.549794 GATTCAAGGATGGGAGTTGAGG 58.450 50.000 0.00 0.00 32.00 3.86
208 209 2.242196 GGGATTCAAGGATGGGAGTTGA 59.758 50.000 0.00 0.00 0.00 3.18
211 212 1.566231 GTGGGATTCAAGGATGGGAGT 59.434 52.381 0.00 0.00 0.00 3.85
222 223 0.034186 GCACTGGATGGTGGGATTCA 60.034 55.000 0.00 0.00 37.65 2.57
265 266 0.391661 GCATGAAGGAGTCGGCAGAA 60.392 55.000 0.00 0.00 0.00 3.02
268 269 0.391661 GAAGCATGAAGGAGTCGGCA 60.392 55.000 0.00 0.00 32.95 5.69
270 271 0.807667 CCGAAGCATGAAGGAGTCGG 60.808 60.000 0.00 0.79 41.71 4.79
296 297 2.024846 AGGGAGTCGGAGAGAAGAATCA 60.025 50.000 0.00 0.00 36.95 2.57
297 298 2.621526 GAGGGAGTCGGAGAGAAGAATC 59.378 54.545 0.00 0.00 36.95 2.52
314 315 2.030717 CCAGTTCGACGATAGATGAGGG 60.031 54.545 0.00 0.00 41.38 4.30
325 326 1.446272 GGAGCCTTCCAGTTCGACG 60.446 63.158 0.00 0.00 43.45 5.12
329 330 1.611936 GGTTCAGGAGCCTTCCAGTTC 60.612 57.143 0.00 0.00 46.64 3.01
351 352 2.268076 GGTGGTTGGCGTCAATGCT 61.268 57.895 5.40 0.00 35.10 3.79
352 353 2.258286 GGTGGTTGGCGTCAATGC 59.742 61.111 5.40 0.00 35.10 3.56
353 354 1.285641 GTGGTGGTTGGCGTCAATG 59.714 57.895 5.40 0.00 35.10 2.82
354 355 1.901464 GGTGGTGGTTGGCGTCAAT 60.901 57.895 5.40 0.00 35.10 2.57
355 356 2.517402 GGTGGTGGTTGGCGTCAA 60.517 61.111 0.00 0.00 0.00 3.18
356 357 4.572571 GGGTGGTGGTTGGCGTCA 62.573 66.667 0.00 0.00 0.00 4.35
357 358 4.572571 TGGGTGGTGGTTGGCGTC 62.573 66.667 0.00 0.00 0.00 5.19
359 360 1.961180 TTTTTGGGTGGTGGTTGGCG 61.961 55.000 0.00 0.00 0.00 5.69
381 394 2.597510 GCAAGTTGGCGGGAAGGT 60.598 61.111 4.75 0.00 0.00 3.50
395 408 4.604114 CAGATGGAGCGTCTGCAA 57.396 55.556 5.31 0.00 46.23 4.08
449 466 1.996187 GGTCAACCCCTCTCTCCCC 60.996 68.421 0.00 0.00 0.00 4.81
544 563 5.456548 TTCGGTATAACTTCTGTGACACA 57.543 39.130 8.26 8.26 0.00 3.72
599 618 9.845740 ACATGAGGTATATGCTACAAAAATACA 57.154 29.630 0.00 0.00 0.00 2.29
609 628 9.899661 AACTAACAAAACATGAGGTATATGCTA 57.100 29.630 0.00 0.00 0.00 3.49
647 666 9.423061 CCTCTTCGTATTTTGGATCAAATTTTT 57.577 29.630 0.00 0.00 33.19 1.94
707 726 3.380637 AGAGAACATGCGTCGGTTACTAT 59.619 43.478 0.00 0.00 0.00 2.12
719 738 0.322816 TTGCTCCCCAGAGAACATGC 60.323 55.000 0.00 0.00 43.39 4.06
720 739 1.004044 AGTTGCTCCCCAGAGAACATG 59.996 52.381 0.00 0.00 43.39 3.21
721 740 1.004044 CAGTTGCTCCCCAGAGAACAT 59.996 52.381 0.00 0.00 43.39 2.71
722 741 0.397941 CAGTTGCTCCCCAGAGAACA 59.602 55.000 0.00 0.00 43.39 3.18
723 742 0.957888 GCAGTTGCTCCCCAGAGAAC 60.958 60.000 0.00 0.00 43.39 3.01
724 743 1.376466 GCAGTTGCTCCCCAGAGAA 59.624 57.895 0.00 0.00 43.39 2.87
725 744 2.596851 GGCAGTTGCTCCCCAGAGA 61.597 63.158 3.88 0.00 43.39 3.10
726 745 2.045536 GGCAGTTGCTCCCCAGAG 60.046 66.667 3.88 0.00 43.57 3.35
727 746 2.853542 TGGCAGTTGCTCCCCAGA 60.854 61.111 3.88 0.00 41.70 3.86
728 747 2.360852 CTGGCAGTTGCTCCCCAG 60.361 66.667 6.28 0.00 41.70 4.45
729 748 4.666253 GCTGGCAGTTGCTCCCCA 62.666 66.667 17.16 0.00 41.70 4.96
732 751 4.704833 TCCGCTGGCAGTTGCTCC 62.705 66.667 17.16 0.00 41.70 4.70
733 752 3.426568 GTCCGCTGGCAGTTGCTC 61.427 66.667 17.16 0.00 41.70 4.26
747 766 0.796927 GTCTGGCAGTTTAAGCGTCC 59.203 55.000 15.27 0.00 0.00 4.79
759 778 2.349590 CACGATCAAGATTGTCTGGCA 58.650 47.619 0.00 0.00 33.27 4.92
762 781 2.738314 TGTGCACGATCAAGATTGTCTG 59.262 45.455 13.13 0.00 33.27 3.51
763 782 2.998670 CTGTGCACGATCAAGATTGTCT 59.001 45.455 13.13 0.00 33.27 3.41
764 783 2.995939 TCTGTGCACGATCAAGATTGTC 59.004 45.455 13.13 0.00 33.27 3.18
765 784 3.044235 TCTGTGCACGATCAAGATTGT 57.956 42.857 13.13 0.00 35.87 2.71
766 785 4.340263 CAATCTGTGCACGATCAAGATTG 58.660 43.478 28.18 28.18 36.44 2.67
767 786 3.376234 CCAATCTGTGCACGATCAAGATT 59.624 43.478 18.66 18.66 0.00 2.40
768 787 2.941064 CCAATCTGTGCACGATCAAGAT 59.059 45.455 19.53 15.14 0.00 2.40
769 788 2.028203 TCCAATCTGTGCACGATCAAGA 60.028 45.455 19.53 13.72 0.00 3.02
770 789 2.094894 GTCCAATCTGTGCACGATCAAG 59.905 50.000 19.53 9.22 0.00 3.02
771 790 2.076100 GTCCAATCTGTGCACGATCAA 58.924 47.619 19.53 9.28 0.00 2.57
772 791 1.725641 GTCCAATCTGTGCACGATCA 58.274 50.000 19.53 8.41 0.00 2.92
773 792 0.647410 CGTCCAATCTGTGCACGATC 59.353 55.000 19.53 9.84 32.08 3.69
774 793 0.246360 TCGTCCAATCTGTGCACGAT 59.754 50.000 13.13 14.50 34.68 3.73
775 794 0.666274 GTCGTCCAATCTGTGCACGA 60.666 55.000 13.13 12.78 37.16 4.35
776 795 0.667487 AGTCGTCCAATCTGTGCACG 60.667 55.000 13.13 7.36 0.00 5.34
777 796 1.512926 AAGTCGTCCAATCTGTGCAC 58.487 50.000 10.75 10.75 0.00 4.57
778 797 2.254546 AAAGTCGTCCAATCTGTGCA 57.745 45.000 0.00 0.00 0.00 4.57
779 798 3.626028 AAAAAGTCGTCCAATCTGTGC 57.374 42.857 0.00 0.00 0.00 4.57
800 819 3.744426 GGATTTCTTTGACTTCGAACGGA 59.256 43.478 0.00 0.00 0.00 4.69
803 822 6.241207 TCATGGATTTCTTTGACTTCGAAC 57.759 37.500 0.00 0.00 0.00 3.95
806 825 7.545362 ACTATCATGGATTTCTTTGACTTCG 57.455 36.000 0.00 0.00 0.00 3.79
844 863 2.035832 GTGTGTTTGGGGAAACTGGATG 59.964 50.000 0.00 0.00 33.95 3.51
857 876 2.423185 TCTGGCAGTTTCAGTGTGTTTG 59.577 45.455 15.27 0.00 34.15 2.93
861 880 2.497138 TCATCTGGCAGTTTCAGTGTG 58.503 47.619 15.27 2.65 34.15 3.82
879 898 4.629634 AGATATGACATTTGCGAACGTTCA 59.370 37.500 26.71 8.77 0.00 3.18
886 905 3.065233 GCCACAAGATATGACATTTGCGA 59.935 43.478 0.00 0.00 0.00 5.10
1359 2457 2.038557 GCTGAAGAAGTACCACTGGGAA 59.961 50.000 0.00 0.00 38.05 3.97
1691 2789 2.093890 CAGTCATAGCACAATGCCCAA 58.906 47.619 0.00 0.00 46.52 4.12
1717 2815 1.387084 GACTCGCAGTAGCAAAAGACG 59.613 52.381 0.00 0.00 42.27 4.18
1753 2851 0.255890 ACATTGCCACCCTAGCGATT 59.744 50.000 0.00 0.00 31.76 3.34
1837 2936 3.428045 GGCACACTACAAATGAATCCTGC 60.428 47.826 0.00 0.00 0.00 4.85
2350 3452 3.068873 CCCATGTGCTAGACCTAGAAGAC 59.931 52.174 8.16 2.36 35.21 3.01
2477 3579 3.146847 GGAACAAGGACTGTAACTTGGG 58.853 50.000 21.37 5.54 46.29 4.12
2710 3873 0.908198 AGGGTTGAGTGAGATGCTCC 59.092 55.000 0.00 0.00 32.31 4.70
2802 3965 3.320610 TTGTGGGAGGAAATTTGGTGA 57.679 42.857 0.00 0.00 0.00 4.02
2984 4150 2.202932 CAGGGGCATCGTTCCTCG 60.203 66.667 0.00 0.00 41.41 4.63
2996 4162 3.787001 GGGCTCGAACTCCAGGGG 61.787 72.222 0.00 0.00 0.00 4.79
3075 4241 1.295423 CAGGGGGTGTAGTTGGTCG 59.705 63.158 0.00 0.00 0.00 4.79
3188 4379 0.033601 GACTGGAGAGGCAGGAGAGA 60.034 60.000 0.00 0.00 0.00 3.10
3428 4624 3.798511 GGCCCGGGGAAGGAAGAG 61.799 72.222 25.28 0.00 0.00 2.85
3561 4758 0.535335 GGTATCAGACGCCAGGTTCA 59.465 55.000 0.00 0.00 0.00 3.18
3798 4995 5.201243 AGGGGCAATATAAGAAAAGGTGTC 58.799 41.667 0.00 0.00 0.00 3.67
3934 5137 2.742348 TGGGATCGGCGGTATGTATAT 58.258 47.619 7.21 0.00 0.00 0.86
3936 5139 1.568504 ATGGGATCGGCGGTATGTAT 58.431 50.000 7.21 0.00 0.00 2.29
3959 5162 8.621286 GTTGAACATATTGTCCCAATAAGGTAG 58.379 37.037 1.19 0.00 34.66 3.18
3969 5172 6.266168 TCACAATGTTGAACATATTGTCCC 57.734 37.500 11.70 0.00 41.60 4.46
4083 5286 6.959639 ACAGCTTCAAGAAGTCCATAAAAA 57.040 33.333 11.14 0.00 40.45 1.94
4117 5320 6.335777 GTGTATAGTTAACGAACATGGTCCT 58.664 40.000 4.85 0.00 38.10 3.85
4161 5549 0.884514 GGCAAGGGAGCTGTCTTTTC 59.115 55.000 0.00 0.00 34.17 2.29
4246 5634 3.535561 AGTTGGTTGCGAGATCTTATGG 58.464 45.455 0.00 0.00 0.00 2.74
4247 5635 4.183865 TGAGTTGGTTGCGAGATCTTATG 58.816 43.478 0.00 0.00 0.00 1.90
4289 5677 2.594592 GGGTGCGTGGAAGCTTGT 60.595 61.111 2.10 0.00 38.13 3.16
4300 5688 1.399744 TAGCTATGGACAGGGGTGCG 61.400 60.000 0.00 0.00 38.35 5.34
4391 5779 2.493675 CGGAGAATGTCAAGAGAGGTCA 59.506 50.000 0.00 0.00 0.00 4.02
4557 5946 6.361433 TCACTTCAAGTAAAAGATGGAACCA 58.639 36.000 0.00 0.00 0.00 3.67
4918 6307 8.699130 TGACTCTTGTGTGTCATTATCTCATAT 58.301 33.333 0.00 0.00 40.43 1.78
5063 6566 2.046796 TTTATGGCGGCGCTGACA 60.047 55.556 30.27 30.27 0.00 3.58
5091 6594 5.959618 TCAGTCTCGTCTGATCTTTTACA 57.040 39.130 0.00 0.00 39.20 2.41
5537 7043 4.331968 TGGTGTTTGAAGTGTCAGAAACT 58.668 39.130 0.00 0.00 34.49 2.66
6264 7773 5.802956 GTGCAGTGAGTTCATCTCTTACTAC 59.197 44.000 0.00 0.00 43.13 2.73
6265 7774 5.712446 AGTGCAGTGAGTTCATCTCTTACTA 59.288 40.000 0.00 0.00 43.13 1.82
6266 7775 4.526262 AGTGCAGTGAGTTCATCTCTTACT 59.474 41.667 0.00 0.00 43.13 2.24
6324 7835 5.766174 TGGGATTGTTGACCTGTAAAAGTAC 59.234 40.000 0.00 0.00 0.00 2.73
6587 8100 1.541672 CTGGAACCAAACACCCCCT 59.458 57.895 0.00 0.00 0.00 4.79
6588 8101 1.533033 CCTGGAACCAAACACCCCC 60.533 63.158 0.00 0.00 0.00 5.40
6589 8102 1.533033 CCCTGGAACCAAACACCCC 60.533 63.158 0.00 0.00 0.00 4.95
6590 8103 0.826256 GTCCCTGGAACCAAACACCC 60.826 60.000 0.00 0.00 0.00 4.61
6591 8104 0.185175 AGTCCCTGGAACCAAACACC 59.815 55.000 0.00 0.00 0.00 4.16
6592 8105 2.067365 AAGTCCCTGGAACCAAACAC 57.933 50.000 0.00 0.00 0.00 3.32
6593 8106 2.838637 AAAGTCCCTGGAACCAAACA 57.161 45.000 0.00 0.00 0.00 2.83
6629 8142 5.163023 TGCTAGGGACTTTTAGGGACTTTTT 60.163 40.000 0.00 0.00 39.49 1.94
6630 8143 4.352893 TGCTAGGGACTTTTAGGGACTTTT 59.647 41.667 0.00 0.00 39.49 2.27
6631 8144 3.914435 TGCTAGGGACTTTTAGGGACTTT 59.086 43.478 0.00 0.00 39.49 2.66
6632 8145 3.527937 TGCTAGGGACTTTTAGGGACTT 58.472 45.455 0.00 0.00 39.49 3.01
6633 8146 3.200958 TGCTAGGGACTTTTAGGGACT 57.799 47.619 0.00 0.00 41.75 3.85
6634 8147 3.994931 TTGCTAGGGACTTTTAGGGAC 57.005 47.619 0.00 0.00 41.75 4.46
6635 8148 3.009805 GGTTTGCTAGGGACTTTTAGGGA 59.990 47.826 0.00 0.00 41.75 4.20
6636 8149 3.245122 TGGTTTGCTAGGGACTTTTAGGG 60.245 47.826 0.00 0.00 41.75 3.53
6637 8150 4.028993 TGGTTTGCTAGGGACTTTTAGG 57.971 45.455 0.00 0.00 41.75 2.69
6638 8151 5.300792 TGTTTGGTTTGCTAGGGACTTTTAG 59.699 40.000 0.00 0.00 41.75 1.85
6639 8152 5.202004 TGTTTGGTTTGCTAGGGACTTTTA 58.798 37.500 0.00 0.00 41.75 1.52
6640 8153 4.027437 TGTTTGGTTTGCTAGGGACTTTT 58.973 39.130 0.00 0.00 41.75 2.27
6641 8154 3.636764 CTGTTTGGTTTGCTAGGGACTTT 59.363 43.478 0.00 0.00 41.75 2.66
6642 8155 3.222603 CTGTTTGGTTTGCTAGGGACTT 58.777 45.455 0.00 0.00 41.75 3.01
6643 8156 2.489073 CCTGTTTGGTTTGCTAGGGACT 60.489 50.000 0.00 0.00 46.37 3.85
6644 8157 1.886542 CCTGTTTGGTTTGCTAGGGAC 59.113 52.381 0.00 0.00 0.00 4.46
6645 8158 1.203001 CCCTGTTTGGTTTGCTAGGGA 60.203 52.381 0.00 0.00 46.19 4.20
6646 8159 1.203001 TCCCTGTTTGGTTTGCTAGGG 60.203 52.381 0.00 0.00 44.96 3.53
6647 8160 2.162681 CTCCCTGTTTGGTTTGCTAGG 58.837 52.381 0.00 0.00 0.00 3.02
6648 8161 2.162681 CCTCCCTGTTTGGTTTGCTAG 58.837 52.381 0.00 0.00 0.00 3.42
6649 8162 1.203001 CCCTCCCTGTTTGGTTTGCTA 60.203 52.381 0.00 0.00 0.00 3.49
6650 8163 0.469892 CCCTCCCTGTTTGGTTTGCT 60.470 55.000 0.00 0.00 0.00 3.91
6651 8164 0.469144 TCCCTCCCTGTTTGGTTTGC 60.469 55.000 0.00 0.00 0.00 3.68
6652 8165 1.133482 AGTCCCTCCCTGTTTGGTTTG 60.133 52.381 0.00 0.00 0.00 2.93
6653 8166 1.231963 AGTCCCTCCCTGTTTGGTTT 58.768 50.000 0.00 0.00 0.00 3.27
6654 8167 1.231963 AAGTCCCTCCCTGTTTGGTT 58.768 50.000 0.00 0.00 0.00 3.67
6655 8168 1.231963 AAAGTCCCTCCCTGTTTGGT 58.768 50.000 0.00 0.00 0.00 3.67
6656 8169 2.365293 CAAAAAGTCCCTCCCTGTTTGG 59.635 50.000 0.00 0.00 34.75 3.28
6657 8170 2.224042 GCAAAAAGTCCCTCCCTGTTTG 60.224 50.000 0.00 0.00 39.24 2.93
6658 8171 2.039418 GCAAAAAGTCCCTCCCTGTTT 58.961 47.619 0.00 0.00 0.00 2.83
6659 8172 1.217942 AGCAAAAAGTCCCTCCCTGTT 59.782 47.619 0.00 0.00 0.00 3.16
6660 8173 0.853530 AGCAAAAAGTCCCTCCCTGT 59.146 50.000 0.00 0.00 0.00 4.00
6661 8174 2.879103 TAGCAAAAAGTCCCTCCCTG 57.121 50.000 0.00 0.00 0.00 4.45
6662 8175 3.895704 TTTAGCAAAAAGTCCCTCCCT 57.104 42.857 0.00 0.00 0.00 4.20
6663 8176 4.521130 CTTTTAGCAAAAAGTCCCTCCC 57.479 45.455 3.06 0.00 44.36 4.30
6672 8185 7.200455 GTGCTTCTAAGGACTTTTAGCAAAAA 58.800 34.615 7.07 0.00 43.15 1.94
6673 8186 6.238925 GGTGCTTCTAAGGACTTTTAGCAAAA 60.239 38.462 13.12 0.00 45.42 2.44
6674 8187 5.240844 GGTGCTTCTAAGGACTTTTAGCAAA 59.759 40.000 13.12 0.00 45.42 3.68
6675 8188 4.760204 GGTGCTTCTAAGGACTTTTAGCAA 59.240 41.667 13.12 1.75 45.42 3.91
6676 8189 4.041691 AGGTGCTTCTAAGGACTTTTAGCA 59.958 41.667 13.12 9.74 45.42 3.49
6677 8190 4.580868 AGGTGCTTCTAAGGACTTTTAGC 58.419 43.478 13.12 0.00 45.42 3.09
6678 8191 5.046231 AGGAGGTGCTTCTAAGGACTTTTAG 60.046 44.000 13.12 0.00 45.42 1.85
6679 8192 4.844655 AGGAGGTGCTTCTAAGGACTTTTA 59.155 41.667 13.12 0.00 45.42 1.52
6680 8193 3.653352 AGGAGGTGCTTCTAAGGACTTTT 59.347 43.478 13.12 1.47 45.42 2.27
6681 8194 3.252351 AGGAGGTGCTTCTAAGGACTTT 58.748 45.455 13.12 3.63 45.42 2.66
6682 8195 2.909217 AGGAGGTGCTTCTAAGGACTT 58.091 47.619 13.12 6.52 45.42 3.01
6683 8196 2.569404 CAAGGAGGTGCTTCTAAGGACT 59.431 50.000 13.12 1.24 45.42 3.85
6684 8197 2.567615 TCAAGGAGGTGCTTCTAAGGAC 59.432 50.000 5.86 5.86 45.39 3.85
6685 8198 2.834549 CTCAAGGAGGTGCTTCTAAGGA 59.165 50.000 0.00 0.00 0.00 3.36
6686 8199 2.834549 TCTCAAGGAGGTGCTTCTAAGG 59.165 50.000 0.00 0.00 0.00 2.69
6687 8200 3.513515 ACTCTCAAGGAGGTGCTTCTAAG 59.486 47.826 0.00 0.00 45.83 2.18
6688 8201 3.511477 ACTCTCAAGGAGGTGCTTCTAA 58.489 45.455 0.00 0.00 45.83 2.10
6689 8202 3.093057 GACTCTCAAGGAGGTGCTTCTA 58.907 50.000 0.00 0.00 45.83 2.10
6690 8203 1.899142 GACTCTCAAGGAGGTGCTTCT 59.101 52.381 0.00 0.00 45.83 2.85
6691 8204 1.899142 AGACTCTCAAGGAGGTGCTTC 59.101 52.381 0.00 0.00 45.83 3.86
6692 8205 2.022718 AGACTCTCAAGGAGGTGCTT 57.977 50.000 0.00 0.00 45.83 3.91
6693 8206 2.022718 AAGACTCTCAAGGAGGTGCT 57.977 50.000 0.00 0.00 45.83 4.40
6694 8207 2.849294 AAAGACTCTCAAGGAGGTGC 57.151 50.000 0.00 0.00 45.83 5.01
6695 8208 4.708177 TGAAAAAGACTCTCAAGGAGGTG 58.292 43.478 0.00 0.00 45.83 4.00
6696 8209 5.373812 TTGAAAAAGACTCTCAAGGAGGT 57.626 39.130 0.00 0.00 45.83 3.85
6697 8210 6.699575 TTTTGAAAAAGACTCTCAAGGAGG 57.300 37.500 0.00 0.00 45.83 4.30
6698 8211 7.766283 ACTTTTTGAAAAAGACTCTCAAGGAG 58.234 34.615 30.55 6.52 46.87 3.69
6699 8212 7.148069 GGACTTTTTGAAAAAGACTCTCAAGGA 60.148 37.037 30.55 0.00 31.11 3.36
6700 8213 6.975197 GGACTTTTTGAAAAAGACTCTCAAGG 59.025 38.462 30.55 7.27 31.11 3.61
6701 8214 7.766283 AGGACTTTTTGAAAAAGACTCTCAAG 58.234 34.615 30.55 7.82 31.11 3.02
6702 8215 7.703058 AGGACTTTTTGAAAAAGACTCTCAA 57.297 32.000 30.55 0.00 0.00 3.02
6703 8216 7.499232 CCTAGGACTTTTTGAAAAAGACTCTCA 59.501 37.037 30.55 14.91 0.00 3.27
6704 8217 7.041030 CCCTAGGACTTTTTGAAAAAGACTCTC 60.041 40.741 30.55 19.27 0.00 3.20
6705 8218 6.773200 CCCTAGGACTTTTTGAAAAAGACTCT 59.227 38.462 30.55 23.56 0.00 3.24
6706 8219 6.771267 TCCCTAGGACTTTTTGAAAAAGACTC 59.229 38.462 30.55 20.15 0.00 3.36
6707 8220 6.669631 TCCCTAGGACTTTTTGAAAAAGACT 58.330 36.000 30.55 26.69 0.00 3.24
6708 8221 6.954487 TCCCTAGGACTTTTTGAAAAAGAC 57.046 37.500 30.55 24.86 0.00 3.01
6741 8254 4.771054 TGTTTGGTTCTCTAGTCCTAGGAC 59.229 45.833 31.29 31.29 44.86 3.85
6742 8255 4.771054 GTGTTTGGTTCTCTAGTCCTAGGA 59.229 45.833 7.62 7.62 34.06 2.94
6743 8256 4.081586 GGTGTTTGGTTCTCTAGTCCTAGG 60.082 50.000 0.82 0.82 34.06 3.02
6744 8257 4.527038 TGGTGTTTGGTTCTCTAGTCCTAG 59.473 45.833 0.00 0.00 34.56 3.02
6745 8258 4.282703 GTGGTGTTTGGTTCTCTAGTCCTA 59.717 45.833 0.00 0.00 0.00 2.94
6746 8259 3.071167 GTGGTGTTTGGTTCTCTAGTCCT 59.929 47.826 0.00 0.00 0.00 3.85
6747 8260 3.400255 GTGGTGTTTGGTTCTCTAGTCC 58.600 50.000 0.00 0.00 0.00 3.85
6748 8261 3.071167 AGGTGGTGTTTGGTTCTCTAGTC 59.929 47.826 0.00 0.00 0.00 2.59
6749 8262 3.046374 AGGTGGTGTTTGGTTCTCTAGT 58.954 45.455 0.00 0.00 0.00 2.57
6750 8263 3.771577 AGGTGGTGTTTGGTTCTCTAG 57.228 47.619 0.00 0.00 0.00 2.43
6751 8264 4.657039 AGTAAGGTGGTGTTTGGTTCTCTA 59.343 41.667 0.00 0.00 0.00 2.43
6752 8265 3.458487 AGTAAGGTGGTGTTTGGTTCTCT 59.542 43.478 0.00 0.00 0.00 3.10
6753 8266 3.816994 AGTAAGGTGGTGTTTGGTTCTC 58.183 45.455 0.00 0.00 0.00 2.87
6754 8267 3.945640 AGTAAGGTGGTGTTTGGTTCT 57.054 42.857 0.00 0.00 0.00 3.01
6755 8268 3.490249 GCAAGTAAGGTGGTGTTTGGTTC 60.490 47.826 0.00 0.00 0.00 3.62
6756 8269 2.429250 GCAAGTAAGGTGGTGTTTGGTT 59.571 45.455 0.00 0.00 0.00 3.67
6757 8270 2.028876 GCAAGTAAGGTGGTGTTTGGT 58.971 47.619 0.00 0.00 0.00 3.67
6758 8271 1.339929 GGCAAGTAAGGTGGTGTTTGG 59.660 52.381 0.00 0.00 0.00 3.28
6759 8272 1.339929 GGGCAAGTAAGGTGGTGTTTG 59.660 52.381 0.00 0.00 0.00 2.93
6760 8273 1.216930 AGGGCAAGTAAGGTGGTGTTT 59.783 47.619 0.00 0.00 0.00 2.83
6761 8274 0.850784 AGGGCAAGTAAGGTGGTGTT 59.149 50.000 0.00 0.00 0.00 3.32
6762 8275 0.110486 CAGGGCAAGTAAGGTGGTGT 59.890 55.000 0.00 0.00 0.00 4.16
6763 8276 0.400213 TCAGGGCAAGTAAGGTGGTG 59.600 55.000 0.00 0.00 0.00 4.17
6764 8277 1.372501 ATCAGGGCAAGTAAGGTGGT 58.627 50.000 0.00 0.00 0.00 4.16
6765 8278 2.514458 AATCAGGGCAAGTAAGGTGG 57.486 50.000 0.00 0.00 0.00 4.61
6766 8279 3.378427 GCTTAATCAGGGCAAGTAAGGTG 59.622 47.826 0.00 0.00 0.00 4.00
6767 8280 3.010138 TGCTTAATCAGGGCAAGTAAGGT 59.990 43.478 0.00 0.00 32.79 3.50
6768 8281 3.620488 TGCTTAATCAGGGCAAGTAAGG 58.380 45.455 0.00 0.00 32.79 2.69
6829 8342 1.202989 TGCCCTGATTAAGCACAACCA 60.203 47.619 0.00 0.00 0.00 3.67
7339 8855 5.105269 TCGCCTCAACACATACAATTACCTA 60.105 40.000 0.00 0.00 0.00 3.08
7421 8939 5.960105 GCTAATGCTGTCGAATTTAACAGAC 59.040 40.000 19.66 13.19 44.54 3.51
7451 8969 1.034838 AACTCACGGGCTGCAAAACA 61.035 50.000 0.50 0.00 0.00 2.83
7465 8983 7.280876 GGAATTCATTGATACAGCACTAACTCA 59.719 37.037 7.93 0.00 0.00 3.41
7611 9132 1.283347 TCCTGAGCTTGGATTCAGCT 58.717 50.000 5.43 0.00 39.54 4.24
7643 9164 6.463995 AACCTGACAAATAACAACACATGT 57.536 33.333 0.00 0.00 46.82 3.21
7644 9165 6.977502 TCAAACCTGACAAATAACAACACATG 59.022 34.615 0.00 0.00 0.00 3.21
7654 9175 8.463930 AGAATTCTGTTCAAACCTGACAAATA 57.536 30.769 7.30 0.00 0.00 1.40
7673 9194 4.212214 CGCCTGCTCCATAGTTTAGAATTC 59.788 45.833 0.00 0.00 0.00 2.17
7685 9206 1.672356 GTTGTGTCGCCTGCTCCAT 60.672 57.895 0.00 0.00 0.00 3.41
7686 9207 2.280797 GTTGTGTCGCCTGCTCCA 60.281 61.111 0.00 0.00 0.00 3.86
7687 9208 3.050275 GGTTGTGTCGCCTGCTCC 61.050 66.667 0.00 0.00 0.00 4.70
7688 9209 3.050275 GGGTTGTGTCGCCTGCTC 61.050 66.667 0.00 0.00 0.00 4.26
7689 9210 3.537206 GAGGGTTGTGTCGCCTGCT 62.537 63.158 0.00 0.00 0.00 4.24
7690 9211 3.050275 GAGGGTTGTGTCGCCTGC 61.050 66.667 0.00 0.00 0.00 4.85
7691 9212 2.358737 GGAGGGTTGTGTCGCCTG 60.359 66.667 0.00 0.00 0.00 4.85
7692 9213 3.637273 GGGAGGGTTGTGTCGCCT 61.637 66.667 0.00 0.00 0.00 5.52
7693 9214 4.717313 GGGGAGGGTTGTGTCGCC 62.717 72.222 0.00 0.00 38.48 5.54
7694 9215 3.637273 AGGGGAGGGTTGTGTCGC 61.637 66.667 0.00 0.00 0.00 5.19
7695 9216 2.347490 CAGGGGAGGGTTGTGTCG 59.653 66.667 0.00 0.00 0.00 4.35
7696 9217 2.034221 GCAGGGGAGGGTTGTGTC 59.966 66.667 0.00 0.00 0.00 3.67
7697 9218 3.953775 CGCAGGGGAGGGTTGTGT 61.954 66.667 0.00 0.00 0.00 3.72
7698 9219 3.612247 CTCGCAGGGGAGGGTTGTG 62.612 68.421 5.52 0.00 0.00 3.33
7699 9220 3.322466 CTCGCAGGGGAGGGTTGT 61.322 66.667 5.52 0.00 0.00 3.32
7700 9221 2.124507 TTTCTCGCAGGGGAGGGTTG 62.125 60.000 12.65 0.00 34.74 3.77
7701 9222 1.846124 TTTCTCGCAGGGGAGGGTT 60.846 57.895 12.65 0.00 34.74 4.11
7702 9223 2.203938 TTTCTCGCAGGGGAGGGT 60.204 61.111 12.65 0.00 34.74 4.34
7703 9224 2.269241 GTTTCTCGCAGGGGAGGG 59.731 66.667 12.65 0.00 34.74 4.30
7704 9225 1.078848 CAGTTTCTCGCAGGGGAGG 60.079 63.158 12.65 0.00 34.74 4.30
7705 9226 0.321671 TTCAGTTTCTCGCAGGGGAG 59.678 55.000 7.00 7.00 35.32 4.30
7706 9227 0.321671 CTTCAGTTTCTCGCAGGGGA 59.678 55.000 0.00 0.00 0.00 4.81
7707 9228 1.301677 GCTTCAGTTTCTCGCAGGGG 61.302 60.000 0.00 0.00 0.00 4.79
7708 9229 0.321122 AGCTTCAGTTTCTCGCAGGG 60.321 55.000 0.00 0.00 0.00 4.45
7709 9230 1.196354 CAAGCTTCAGTTTCTCGCAGG 59.804 52.381 0.00 0.00 0.00 4.85
7710 9231 2.096516 GTCAAGCTTCAGTTTCTCGCAG 60.097 50.000 0.00 0.00 0.00 5.18
7711 9232 1.867233 GTCAAGCTTCAGTTTCTCGCA 59.133 47.619 0.00 0.00 0.00 5.10
7712 9233 1.136502 CGTCAAGCTTCAGTTTCTCGC 60.137 52.381 0.00 0.00 0.00 5.03
7713 9234 1.136502 GCGTCAAGCTTCAGTTTCTCG 60.137 52.381 0.00 0.00 44.04 4.04
7714 9235 2.585888 GCGTCAAGCTTCAGTTTCTC 57.414 50.000 0.00 0.00 44.04 2.87
7735 9256 4.009675 CGATGAACTGATGGGAGGAAAAA 58.990 43.478 0.00 0.00 0.00 1.94
7736 9257 3.609853 CGATGAACTGATGGGAGGAAAA 58.390 45.455 0.00 0.00 0.00 2.29
7737 9258 2.680805 GCGATGAACTGATGGGAGGAAA 60.681 50.000 0.00 0.00 0.00 3.13
7738 9259 1.134401 GCGATGAACTGATGGGAGGAA 60.134 52.381 0.00 0.00 0.00 3.36
7739 9260 0.465705 GCGATGAACTGATGGGAGGA 59.534 55.000 0.00 0.00 0.00 3.71
7740 9261 0.467384 AGCGATGAACTGATGGGAGG 59.533 55.000 0.00 0.00 0.00 4.30
7741 9262 3.388308 CTTAGCGATGAACTGATGGGAG 58.612 50.000 0.00 0.00 0.00 4.30
7742 9263 2.103094 CCTTAGCGATGAACTGATGGGA 59.897 50.000 0.00 0.00 0.00 4.37
7743 9264 2.158900 ACCTTAGCGATGAACTGATGGG 60.159 50.000 0.00 0.00 0.00 4.00
7744 9265 3.126831 GACCTTAGCGATGAACTGATGG 58.873 50.000 0.00 0.00 0.00 3.51
7745 9266 2.791560 CGACCTTAGCGATGAACTGATG 59.208 50.000 0.00 0.00 0.00 3.07
7746 9267 2.688446 TCGACCTTAGCGATGAACTGAT 59.312 45.455 0.00 0.00 32.09 2.90
7747 9268 2.089201 TCGACCTTAGCGATGAACTGA 58.911 47.619 0.00 0.00 32.09 3.41
7748 9269 2.561733 TCGACCTTAGCGATGAACTG 57.438 50.000 0.00 0.00 32.09 3.16
7749 9270 3.253677 CCTATCGACCTTAGCGATGAACT 59.746 47.826 8.56 0.00 46.73 3.01
7750 9271 3.566523 CCTATCGACCTTAGCGATGAAC 58.433 50.000 8.56 0.00 46.73 3.18
7751 9272 2.557056 CCCTATCGACCTTAGCGATGAA 59.443 50.000 8.56 0.00 46.73 2.57
7752 9273 2.160205 CCCTATCGACCTTAGCGATGA 58.840 52.381 8.56 0.00 46.73 2.92
7753 9274 1.887198 ACCCTATCGACCTTAGCGATG 59.113 52.381 8.56 0.12 46.73 3.84
7755 9276 1.679680 CAACCCTATCGACCTTAGCGA 59.320 52.381 0.00 0.00 42.48 4.93
7756 9277 1.269621 CCAACCCTATCGACCTTAGCG 60.270 57.143 0.00 0.00 0.00 4.26
7757 9278 1.070289 CCCAACCCTATCGACCTTAGC 59.930 57.143 0.00 0.00 0.00 3.09
7758 9279 1.070289 GCCCAACCCTATCGACCTTAG 59.930 57.143 0.00 0.00 0.00 2.18
7759 9280 1.125633 GCCCAACCCTATCGACCTTA 58.874 55.000 0.00 0.00 0.00 2.69
7760 9281 1.912971 GCCCAACCCTATCGACCTT 59.087 57.895 0.00 0.00 0.00 3.50
7761 9282 2.432300 CGCCCAACCCTATCGACCT 61.432 63.158 0.00 0.00 0.00 3.85
7762 9283 2.108362 CGCCCAACCCTATCGACC 59.892 66.667 0.00 0.00 0.00 4.79
7763 9284 2.108362 CCGCCCAACCCTATCGAC 59.892 66.667 0.00 0.00 0.00 4.20
7764 9285 2.364579 ACCGCCCAACCCTATCGA 60.365 61.111 0.00 0.00 0.00 3.59
7765 9286 2.108362 GACCGCCCAACCCTATCG 59.892 66.667 0.00 0.00 0.00 2.92
7766 9287 2.372074 TGGACCGCCCAACCCTATC 61.372 63.158 0.00 0.00 43.29 2.08
7767 9288 2.285818 TGGACCGCCCAACCCTAT 60.286 61.111 0.00 0.00 43.29 2.57
7774 9295 3.074281 CTAAGGTTGGACCGCCCA 58.926 61.111 2.36 0.00 44.90 5.36
7775 9296 2.437895 GCTAAGGTTGGACCGCCC 60.438 66.667 1.65 0.00 44.90 6.13
7776 9297 2.588856 ATCGCTAAGGTTGGACCGCC 62.589 60.000 0.00 0.00 44.90 6.13
7777 9298 1.153429 ATCGCTAAGGTTGGACCGC 60.153 57.895 0.00 0.00 44.90 5.68
7778 9299 0.174845 TCATCGCTAAGGTTGGACCG 59.825 55.000 0.00 0.00 44.90 4.79
7779 9300 1.941325 CTCATCGCTAAGGTTGGACC 58.059 55.000 0.00 0.00 38.99 4.46
7780 9301 1.291132 GCTCATCGCTAAGGTTGGAC 58.709 55.000 0.00 0.00 35.14 4.02
7781 9302 3.760693 GCTCATCGCTAAGGTTGGA 57.239 52.632 0.00 0.00 35.14 3.53
7798 9319 2.899339 GCCCCGAAGAGCATCAGC 60.899 66.667 0.00 0.00 37.82 4.26
7799 9320 1.147824 ATGCCCCGAAGAGCATCAG 59.852 57.895 0.00 0.00 42.11 2.90
7800 9321 3.323622 ATGCCCCGAAGAGCATCA 58.676 55.556 0.00 0.00 42.11 3.07
7802 9323 1.053264 AGAGATGCCCCGAAGAGCAT 61.053 55.000 0.00 0.00 46.87 3.79
7803 9324 1.267574 AAGAGATGCCCCGAAGAGCA 61.268 55.000 0.00 0.00 40.55 4.26
7804 9325 0.813210 CAAGAGATGCCCCGAAGAGC 60.813 60.000 0.00 0.00 0.00 4.09
7805 9326 3.376218 CAAGAGATGCCCCGAAGAG 57.624 57.895 0.00 0.00 0.00 2.85
7815 9336 1.932511 GAGAGAAAGCCGCAAGAGATG 59.067 52.381 0.00 0.00 43.02 2.90
7816 9337 1.470632 CGAGAGAAAGCCGCAAGAGAT 60.471 52.381 0.00 0.00 43.02 2.75
7817 9338 0.109086 CGAGAGAAAGCCGCAAGAGA 60.109 55.000 0.00 0.00 43.02 3.10
7818 9339 2.367844 CGAGAGAAAGCCGCAAGAG 58.632 57.895 0.00 0.00 43.02 2.85
7819 9340 4.578913 CGAGAGAAAGCCGCAAGA 57.421 55.556 0.00 0.00 43.02 3.02
7824 9345 1.760268 GAGCATGCGAGAGAAAGCCG 61.760 60.000 13.01 0.00 0.00 5.52
7825 9346 0.461693 AGAGCATGCGAGAGAAAGCC 60.462 55.000 13.01 0.00 0.00 4.35
7826 9347 0.929615 GAGAGCATGCGAGAGAAAGC 59.070 55.000 13.01 0.00 0.00 3.51
7827 9348 1.198767 CGAGAGCATGCGAGAGAAAG 58.801 55.000 13.01 0.00 0.00 2.62
7828 9349 0.179127 CCGAGAGCATGCGAGAGAAA 60.179 55.000 13.01 0.00 0.00 2.52
7829 9350 1.315981 ACCGAGAGCATGCGAGAGAA 61.316 55.000 13.01 0.00 0.00 2.87
7830 9351 1.750780 ACCGAGAGCATGCGAGAGA 60.751 57.895 13.01 0.00 0.00 3.10
7831 9352 1.588403 CACCGAGAGCATGCGAGAG 60.588 63.158 13.01 5.69 0.00 3.20
7832 9353 2.491621 CACCGAGAGCATGCGAGA 59.508 61.111 13.01 0.00 0.00 4.04
7833 9354 2.584418 CCACCGAGAGCATGCGAG 60.584 66.667 13.01 4.94 0.00 5.03
7834 9355 4.819761 GCCACCGAGAGCATGCGA 62.820 66.667 13.01 0.00 0.00 5.10
8003 9524 2.134789 ATCAGCACAACATCCCCTTC 57.865 50.000 0.00 0.00 0.00 3.46
8050 9571 1.503542 CAGCCGAACACAAGATGGC 59.496 57.895 0.00 0.00 46.07 4.40
8078 9599 2.490509 CAACAAGATCCAGAATGCAGCA 59.509 45.455 0.00 0.00 31.97 4.41
8216 9737 6.468637 GTCTCTCGGACTCGAAAAGTAATAAC 59.531 42.308 0.00 0.00 45.47 1.89
8238 9779 9.988815 AATTTATAGATTCGACAGCAATAGTCT 57.011 29.630 0.00 0.00 33.89 3.24
8282 9823 7.609056 TGTATTTGGTAACTCTCCTGTAGTTC 58.391 38.462 0.00 0.00 38.18 3.01
8329 11643 8.197439 CCTAGGCAAAAAGAAAAGAAAGAAGAA 58.803 33.333 0.00 0.00 0.00 2.52
8355 11669 0.593618 TGAGAGGACGCTATGATCGC 59.406 55.000 0.00 0.00 0.00 4.58
8366 11680 8.257306 AGAGAAACAGAGAAATATTGAGAGGAC 58.743 37.037 0.00 0.00 0.00 3.85
8370 11684 7.548427 CAGCAGAGAAACAGAGAAATATTGAGA 59.452 37.037 0.00 0.00 0.00 3.27
8429 11743 3.373130 GCTAAAACCCGGTCAATGAGTAC 59.627 47.826 0.00 0.00 0.00 2.73
8498 11812 5.238214 GCATCTTCTTCACAGAACAGTTCTT 59.762 40.000 13.53 2.92 38.11 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.