Multiple sequence alignment - TraesCS7D01G282900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G282900 chr7D 100.000 9858 0 0 1 9858 290911643 290921500 0.000000e+00 18205.0
1 TraesCS7D01G282900 chr7D 90.461 954 68 8 7 939 53444665 53443714 0.000000e+00 1236.0
2 TraesCS7D01G282900 chr7D 97.778 45 1 0 1895 1939 290913067 290913111 2.950000e-10 78.7
3 TraesCS7D01G282900 chr7D 97.778 45 1 0 1425 1469 290913537 290913581 2.950000e-10 78.7
4 TraesCS7D01G282900 chr7A 97.101 5829 129 24 3198 9000 329476244 329482058 0.000000e+00 9792.0
5 TraesCS7D01G282900 chr7A 94.882 762 24 5 2449 3195 329475453 329476214 0.000000e+00 1177.0
6 TraesCS7D01G282900 chr7A 95.820 622 18 4 942 1555 329472057 329472678 0.000000e+00 998.0
7 TraesCS7D01G282900 chr7A 92.804 667 25 7 1 649 604956131 604956792 0.000000e+00 944.0
8 TraesCS7D01G282900 chr7A 96.575 292 6 3 2024 2312 329475030 329475320 1.930000e-131 481.0
9 TraesCS7D01G282900 chr7A 97.630 211 4 1 1674 1883 329474834 329475044 2.620000e-95 361.0
10 TraesCS7D01G282900 chr7A 96.183 131 5 0 1542 1672 329474083 329474213 2.160000e-51 215.0
11 TraesCS7D01G282900 chr7A 87.273 110 2 5 2341 2450 329475321 329475418 2.250000e-21 115.0
12 TraesCS7D01G282900 chr7A 94.915 59 2 1 3621 3678 329476570 329476628 3.790000e-14 91.6
13 TraesCS7D01G282900 chr7A 97.778 45 1 0 1895 1939 329472548 329472592 2.950000e-10 78.7
14 TraesCS7D01G282900 chr7B 96.693 5746 121 26 3198 8908 362537488 362543199 0.000000e+00 9494.0
15 TraesCS7D01G282900 chr7B 97.254 947 20 4 942 1883 362535064 362536009 0.000000e+00 1600.0
16 TraesCS7D01G282900 chr7B 89.446 938 82 11 7 933 504201076 504202007 0.000000e+00 1168.0
17 TraesCS7D01G282900 chr7B 94.692 697 22 5 2518 3199 362536766 362537462 0.000000e+00 1068.0
18 TraesCS7D01G282900 chr7B 95.652 345 10 4 2024 2364 362535995 362536338 5.200000e-152 549.0
19 TraesCS7D01G282900 chr7B 91.880 234 7 6 2449 2671 362536532 362536764 5.750000e-82 316.0
20 TraesCS7D01G282900 chr7B 87.603 121 10 2 8880 9000 362543201 362543316 1.730000e-27 135.0
21 TraesCS7D01G282900 chr7B 94.915 59 2 1 3621 3678 362537817 362537875 3.790000e-14 91.6
22 TraesCS7D01G282900 chr7B 92.593 54 4 0 1957 2010 125361412 125361359 2.950000e-10 78.7
23 TraesCS7D01G282900 chr7B 97.778 45 1 0 1895 1939 362535551 362535595 2.950000e-10 78.7
24 TraesCS7D01G282900 chr3D 92.075 959 56 9 1 939 506882379 506881421 0.000000e+00 1332.0
25 TraesCS7D01G282900 chr3D 91.405 954 59 9 7 939 578223270 578222319 0.000000e+00 1286.0
26 TraesCS7D01G282900 chr3D 90.401 948 68 8 7 933 184627279 184626334 0.000000e+00 1225.0
27 TraesCS7D01G282900 chr3D 85.263 190 26 2 9669 9856 377889958 377889769 2.810000e-45 195.0
28 TraesCS7D01G282900 chr4A 90.919 958 67 12 1 939 177649042 177648086 0.000000e+00 1269.0
29 TraesCS7D01G282900 chr4A 92.273 660 33 10 1 642 167678365 167677706 0.000000e+00 920.0
30 TraesCS7D01G282900 chr4A 86.567 67 7 2 1957 2022 602285495 602285560 1.370000e-08 73.1
31 TraesCS7D01G282900 chr3A 90.292 958 62 8 1 939 209659237 209658292 0.000000e+00 1225.0
32 TraesCS7D01G282900 chr3A 89.817 383 37 2 9267 9648 434767756 434768137 3.200000e-134 490.0
33 TraesCS7D01G282900 chr3A 85.417 192 25 3 9298 9486 61350297 61350488 7.810000e-46 196.0
34 TraesCS7D01G282900 chr3A 85.263 190 26 2 9669 9856 501935775 501935586 2.810000e-45 195.0
35 TraesCS7D01G282900 chr3A 90.909 55 5 0 1964 2018 313546929 313546983 3.820000e-09 75.0
36 TraesCS7D01G282900 chr6A 90.979 909 69 9 7 906 105156901 105157805 0.000000e+00 1212.0
37 TraesCS7D01G282900 chr1B 89.252 949 75 11 7 933 167929168 167930111 0.000000e+00 1162.0
38 TraesCS7D01G282900 chr4B 90.244 902 68 8 32 918 416151854 416152750 0.000000e+00 1160.0
39 TraesCS7D01G282900 chr3B 84.710 569 58 17 9310 9858 787550510 787549951 8.710000e-150 542.0
40 TraesCS7D01G282900 chr6D 83.630 281 43 3 9302 9580 439771307 439771586 2.730000e-65 261.0
41 TraesCS7D01G282900 chr6D 91.379 58 5 0 1957 2014 115682504 115682561 8.210000e-11 80.5
42 TraesCS7D01G282900 chr2D 87.500 192 18 4 9668 9855 427950789 427950600 6.000000e-52 217.0
43 TraesCS7D01G282900 chr2D 87.368 95 12 0 8993 9087 427950136 427950230 1.050000e-19 110.0
44 TraesCS7D01G282900 chr2D 91.228 57 3 2 1957 2012 380046693 380046638 1.060000e-09 76.8
45 TraesCS7D01G282900 chr2A 85.864 191 24 3 9668 9856 113923070 113922881 6.040000e-47 200.0
46 TraesCS7D01G282900 chr2A 93.548 62 3 1 1957 2018 644087866 644087806 3.790000e-14 91.6
47 TraesCS7D01G282900 chr2A 82.716 81 7 6 1957 2036 613075155 613075081 2.300000e-06 65.8
48 TraesCS7D01G282900 chr2A 100.000 31 0 0 9458 9488 677395054 677395084 3.850000e-04 58.4
49 TraesCS7D01G282900 chr2B 90.361 83 8 0 8997 9079 771036478 771036396 1.050000e-19 110.0
50 TraesCS7D01G282900 chrUn 77.333 150 28 2 8999 9143 229552651 229552799 6.340000e-12 84.2
51 TraesCS7D01G282900 chrUn 92.857 56 3 1 1957 2012 298565280 298565334 8.210000e-11 80.5
52 TraesCS7D01G282900 chr4D 94.118 51 3 0 1962 2012 118238467 118238417 2.950000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G282900 chr7D 290911643 290921500 9857 False 18205.000000 18205 100.000000 1 9858 1 chr7D.!!$F1 9857
1 TraesCS7D01G282900 chr7D 53443714 53444665 951 True 1236.000000 1236 90.461000 7 939 1 chr7D.!!$R1 932
2 TraesCS7D01G282900 chr7A 329472057 329482058 10001 False 1652.212500 9792 95.405250 942 9000 8 chr7A.!!$F3 8058
3 TraesCS7D01G282900 chr7A 604956131 604956792 661 False 944.000000 944 92.804000 1 649 1 chr7A.!!$F2 648
4 TraesCS7D01G282900 chr7B 362535064 362543199 8135 False 2184.283333 9494 95.658167 942 8908 6 chr7B.!!$F4 7966
5 TraesCS7D01G282900 chr7B 504201076 504202007 931 False 1168.000000 1168 89.446000 7 933 1 chr7B.!!$F3 926
6 TraesCS7D01G282900 chr3D 506881421 506882379 958 True 1332.000000 1332 92.075000 1 939 1 chr3D.!!$R3 938
7 TraesCS7D01G282900 chr3D 578222319 578223270 951 True 1286.000000 1286 91.405000 7 939 1 chr3D.!!$R4 932
8 TraesCS7D01G282900 chr3D 184626334 184627279 945 True 1225.000000 1225 90.401000 7 933 1 chr3D.!!$R1 926
9 TraesCS7D01G282900 chr4A 177648086 177649042 956 True 1269.000000 1269 90.919000 1 939 1 chr4A.!!$R2 938
10 TraesCS7D01G282900 chr4A 167677706 167678365 659 True 920.000000 920 92.273000 1 642 1 chr4A.!!$R1 641
11 TraesCS7D01G282900 chr3A 209658292 209659237 945 True 1225.000000 1225 90.292000 1 939 1 chr3A.!!$R1 938
12 TraesCS7D01G282900 chr6A 105156901 105157805 904 False 1212.000000 1212 90.979000 7 906 1 chr6A.!!$F1 899
13 TraesCS7D01G282900 chr1B 167929168 167930111 943 False 1162.000000 1162 89.252000 7 933 1 chr1B.!!$F1 926
14 TraesCS7D01G282900 chr4B 416151854 416152750 896 False 1160.000000 1160 90.244000 32 918 1 chr4B.!!$F1 886
15 TraesCS7D01G282900 chr3B 787549951 787550510 559 True 542.000000 542 84.710000 9310 9858 1 chr3B.!!$R1 548

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
958 986 1.002430 CTCACTAAAGCCAGCAGTCCA 59.998 52.381 0.00 0.0 0.00 4.02 F
1396 1428 0.033991 CCTTCCTCTCCTCCGTCTCA 60.034 60.000 0.00 0.0 0.00 3.27 F
1901 3975 0.108424 TTGGCCGCATGTATTTTGCC 60.108 50.000 0.00 0.0 36.75 4.52 F
1927 4001 0.114168 TGGGTGCTGGCTGGTATTTT 59.886 50.000 0.00 0.0 0.00 1.82 F
3162 5529 0.400213 TCGGTCCAGAATTTGCAGGT 59.600 50.000 0.00 0.0 0.00 4.00 F
3218 5612 0.678048 GTGTGGAGGAAGATGGTGCC 60.678 60.000 0.00 0.0 0.00 5.01 F
4499 6901 1.141053 ACTCCCGGGATGATTTGCTAC 59.859 52.381 27.07 0.0 0.00 3.58 F
4928 7331 0.313987 CCGTTTTTCTTCCTGTGCCC 59.686 55.000 0.00 0.0 0.00 5.36 F
6213 8640 0.388907 GCATTTGTCACCTGCGCATT 60.389 50.000 12.24 0.0 0.00 3.56 F
6273 8700 1.066215 TCACATCGCAGCAGGTACAAT 60.066 47.619 0.00 0.0 0.00 2.71 F
6550 8977 3.255725 CATGTAAGTTTTGCAGCCCATG 58.744 45.455 0.00 0.0 0.00 3.66 F
8379 10811 2.047939 GCATGGCAAAGCACCACC 60.048 61.111 10.00 0.0 40.82 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1882 3956 0.108424 GGCAAAATACATGCGGCCAA 60.108 50.000 2.24 0.0 44.75 4.52 R
2397 4483 0.252057 AATTGTAGCCCAACCCACCC 60.252 55.000 0.00 0.0 35.44 4.61 R
3184 5551 0.319900 CACACTGACCCTCCACTTCG 60.320 60.000 0.00 0.0 0.00 3.79 R
3697 6091 0.961857 AAACATCAGATGCTGCGCCA 60.962 50.000 10.59 0.0 0.00 5.69 R
4113 6507 0.319555 TGTAGACAGCACGACAAGCC 60.320 55.000 0.00 0.0 0.00 4.35 R
4873 7276 0.385974 GCTGTGGTTTGCTACAAGCG 60.386 55.000 0.00 0.0 46.26 4.68 R
6184 8611 2.375110 GTGACAAATGCTGACGTGTTG 58.625 47.619 0.00 0.0 0.00 3.33 R
6550 8977 4.429854 AATCTTCCCATCAGAGCCTAAC 57.570 45.455 0.00 0.0 0.00 2.34 R
7743 10173 1.329906 GCTGAGATGCTCATTTGGACG 59.670 52.381 0.00 0.0 39.92 4.79 R
7809 10241 3.953612 TGCCATCTGTTTTGTCTCACTTT 59.046 39.130 0.00 0.0 0.00 2.66 R
8413 10845 0.530870 GGCACTTGTCCGATAGAGGC 60.531 60.000 0.00 0.0 39.76 4.70 R
9278 11710 0.448990 CGAATGACCGTCGACCACTA 59.551 55.000 10.58 0.0 41.02 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
94 95 4.160642 TCAGCATTCCTACAATGAGCAT 57.839 40.909 0.00 0.00 0.00 3.79
109 110 1.876156 GAGCATTGCAGTAGGGCATAC 59.124 52.381 11.91 0.06 44.48 2.39
112 113 3.072915 AGCATTGCAGTAGGGCATACATA 59.927 43.478 12.29 0.00 44.48 2.29
319 320 1.889170 CTCGCACAGCCCTATCAGATA 59.111 52.381 0.00 0.00 0.00 1.98
336 337 4.039730 TCAGATATAGCTCAAGACCCTTGC 59.960 45.833 0.00 0.00 0.00 4.01
402 410 4.707934 TCCAAGTTACCATCATGTACGAGA 59.292 41.667 0.00 0.00 0.00 4.04
458 466 3.408634 ACCACCTACACAGAAAAATCCG 58.591 45.455 0.00 0.00 0.00 4.18
468 477 5.236263 ACACAGAAAAATCCGCAAATTTTCC 59.764 36.000 6.51 0.00 41.64 3.13
918 946 8.582437 CATGATACCAATCTATTTTGAATGCCT 58.418 33.333 0.00 0.00 32.93 4.75
936 964 8.415553 TGAATGCCTCAATTATGATACTTTTGG 58.584 33.333 0.00 0.00 34.37 3.28
939 967 5.302823 GCCTCAATTATGATACTTTTGGGCT 59.697 40.000 0.00 0.00 34.37 5.19
940 968 6.515696 GCCTCAATTATGATACTTTTGGGCTC 60.516 42.308 0.00 0.00 34.37 4.70
944 972 8.271458 TCAATTATGATACTTTTGGGCTCACTA 58.729 33.333 0.00 0.00 0.00 2.74
958 986 1.002430 CTCACTAAAGCCAGCAGTCCA 59.998 52.381 0.00 0.00 0.00 4.02
1143 1171 3.541713 CCTAGCAGCTCGTCCCCC 61.542 72.222 0.00 0.00 0.00 5.40
1391 1423 3.532155 CGCCCTTCCTCTCCTCCG 61.532 72.222 0.00 0.00 0.00 4.63
1392 1424 2.364448 GCCCTTCCTCTCCTCCGT 60.364 66.667 0.00 0.00 0.00 4.69
1394 1426 1.308326 CCCTTCCTCTCCTCCGTCT 59.692 63.158 0.00 0.00 0.00 4.18
1395 1427 0.753848 CCCTTCCTCTCCTCCGTCTC 60.754 65.000 0.00 0.00 0.00 3.36
1396 1428 0.033991 CCTTCCTCTCCTCCGTCTCA 60.034 60.000 0.00 0.00 0.00 3.27
1491 1527 4.153296 TCACGTTTGTTGATGCGATGTATT 59.847 37.500 0.00 0.00 0.00 1.89
1527 1563 7.147742 TGTGATTGCATCTAGGTATGACACTTA 60.148 37.037 0.00 0.00 0.00 2.24
1550 1586 5.617528 TGCTTGGGGTCGATTTTAGTATA 57.382 39.130 0.00 0.00 0.00 1.47
1564 3018 6.913873 TTTTAGTATAAATCAGTGGCCGTC 57.086 37.500 0.00 0.00 0.00 4.79
1621 3075 7.452880 TGGAGGAATTTCTTGTTGATACTTG 57.547 36.000 0.00 0.00 0.00 3.16
1727 3801 3.882288 GGGGTTGATTGTTTGTTGCAAAT 59.118 39.130 0.00 0.00 0.00 2.32
1839 3913 5.512788 CGGTGATTGCAGTTTATGTTTCATC 59.487 40.000 0.00 0.00 0.00 2.92
1841 3915 6.389091 GTGATTGCAGTTTATGTTTCATCCA 58.611 36.000 0.00 0.00 0.00 3.41
1882 3956 9.151471 GTGTGTTAAGTATCACATGTATCTTGT 57.849 33.333 0.00 0.00 44.48 3.16
1883 3957 9.719355 TGTGTTAAGTATCACATGTATCTTGTT 57.281 29.630 0.00 0.00 39.23 2.83
1884 3958 9.973246 GTGTTAAGTATCACATGTATCTTGTTG 57.027 33.333 0.00 0.00 35.04 3.33
1885 3959 9.161629 TGTTAAGTATCACATGTATCTTGTTGG 57.838 33.333 0.00 0.00 0.00 3.77
1886 3960 6.683974 AAGTATCACATGTATCTTGTTGGC 57.316 37.500 0.00 0.00 0.00 4.52
1887 3961 5.126067 AGTATCACATGTATCTTGTTGGCC 58.874 41.667 0.00 0.00 0.00 5.36
1888 3962 2.355197 TCACATGTATCTTGTTGGCCG 58.645 47.619 0.00 0.00 0.00 6.13
1889 3963 1.094785 ACATGTATCTTGTTGGCCGC 58.905 50.000 0.00 0.00 0.00 6.53
1890 3964 1.093972 CATGTATCTTGTTGGCCGCA 58.906 50.000 0.00 0.00 0.00 5.69
1891 3965 1.677576 CATGTATCTTGTTGGCCGCAT 59.322 47.619 0.00 0.00 0.00 4.73
1892 3966 1.093972 TGTATCTTGTTGGCCGCATG 58.906 50.000 0.00 2.37 0.00 4.06
1893 3967 1.094785 GTATCTTGTTGGCCGCATGT 58.905 50.000 0.00 0.00 0.00 3.21
1894 3968 2.285083 GTATCTTGTTGGCCGCATGTA 58.715 47.619 0.00 0.00 0.00 2.29
1895 3969 2.057137 ATCTTGTTGGCCGCATGTAT 57.943 45.000 0.00 0.00 0.00 2.29
1896 3970 1.832883 TCTTGTTGGCCGCATGTATT 58.167 45.000 0.00 0.00 0.00 1.89
1897 3971 2.166829 TCTTGTTGGCCGCATGTATTT 58.833 42.857 0.00 0.00 0.00 1.40
1898 3972 2.560542 TCTTGTTGGCCGCATGTATTTT 59.439 40.909 0.00 0.00 0.00 1.82
1899 3973 2.360553 TGTTGGCCGCATGTATTTTG 57.639 45.000 0.00 0.00 0.00 2.44
1900 3974 0.998669 GTTGGCCGCATGTATTTTGC 59.001 50.000 0.00 0.00 36.74 3.68
1901 3975 0.108424 TTGGCCGCATGTATTTTGCC 60.108 50.000 0.00 0.00 36.75 4.52
1902 3976 0.969917 TGGCCGCATGTATTTTGCCT 60.970 50.000 0.00 0.00 39.60 4.75
1903 3977 0.249031 GGCCGCATGTATTTTGCCTC 60.249 55.000 0.00 0.00 36.75 4.70
1904 3978 0.592247 GCCGCATGTATTTTGCCTCG 60.592 55.000 0.00 0.00 36.75 4.63
1905 3979 0.732571 CCGCATGTATTTTGCCTCGT 59.267 50.000 0.00 0.00 36.75 4.18
1906 3980 1.531677 CCGCATGTATTTTGCCTCGTG 60.532 52.381 0.00 0.00 36.75 4.35
1907 3981 1.531677 CGCATGTATTTTGCCTCGTGG 60.532 52.381 0.00 0.00 36.75 4.94
1908 3982 1.472480 GCATGTATTTTGCCTCGTGGT 59.528 47.619 5.26 0.00 33.95 4.16
1909 3983 2.731968 GCATGTATTTTGCCTCGTGGTG 60.732 50.000 5.26 0.00 33.95 4.17
1910 3984 1.529226 TGTATTTTGCCTCGTGGTGG 58.471 50.000 5.26 0.00 35.27 4.61
1911 3985 0.808755 GTATTTTGCCTCGTGGTGGG 59.191 55.000 5.26 0.00 35.27 4.61
1912 3986 0.402504 TATTTTGCCTCGTGGTGGGT 59.597 50.000 5.26 0.00 35.27 4.51
1913 3987 1.178534 ATTTTGCCTCGTGGTGGGTG 61.179 55.000 5.26 0.00 35.27 4.61
1914 3988 4.947147 TTGCCTCGTGGTGGGTGC 62.947 66.667 5.26 0.00 35.27 5.01
1917 3991 4.704833 CCTCGTGGTGGGTGCTGG 62.705 72.222 0.00 0.00 0.00 4.85
1923 3997 3.646715 GGTGGGTGCTGGCTGGTA 61.647 66.667 0.00 0.00 0.00 3.25
1924 3998 2.677228 GTGGGTGCTGGCTGGTAT 59.323 61.111 0.00 0.00 0.00 2.73
1925 3999 1.000896 GTGGGTGCTGGCTGGTATT 60.001 57.895 0.00 0.00 0.00 1.89
1926 4000 0.611896 GTGGGTGCTGGCTGGTATTT 60.612 55.000 0.00 0.00 0.00 1.40
1927 4001 0.114168 TGGGTGCTGGCTGGTATTTT 59.886 50.000 0.00 0.00 0.00 1.82
1928 4002 0.532115 GGGTGCTGGCTGGTATTTTG 59.468 55.000 0.00 0.00 0.00 2.44
1929 4003 1.544724 GGTGCTGGCTGGTATTTTGA 58.455 50.000 0.00 0.00 0.00 2.69
1930 4004 2.102578 GGTGCTGGCTGGTATTTTGAT 58.897 47.619 0.00 0.00 0.00 2.57
1931 4005 2.159198 GGTGCTGGCTGGTATTTTGATG 60.159 50.000 0.00 0.00 0.00 3.07
1932 4006 2.754552 GTGCTGGCTGGTATTTTGATGA 59.245 45.455 0.00 0.00 0.00 2.92
1933 4007 3.193267 GTGCTGGCTGGTATTTTGATGAA 59.807 43.478 0.00 0.00 0.00 2.57
1934 4008 4.025360 TGCTGGCTGGTATTTTGATGAAT 58.975 39.130 0.00 0.00 0.00 2.57
1935 4009 5.067674 GTGCTGGCTGGTATTTTGATGAATA 59.932 40.000 0.00 0.00 0.00 1.75
1936 4010 5.655974 TGCTGGCTGGTATTTTGATGAATAA 59.344 36.000 0.00 0.00 0.00 1.40
1937 4011 6.324512 TGCTGGCTGGTATTTTGATGAATAAT 59.675 34.615 0.00 0.00 0.00 1.28
1938 4012 7.147689 TGCTGGCTGGTATTTTGATGAATAATT 60.148 33.333 0.00 0.00 0.00 1.40
1939 4013 8.359642 GCTGGCTGGTATTTTGATGAATAATTA 58.640 33.333 0.00 0.00 0.00 1.40
1954 4028 7.182361 TGAATAATTATTCAGCTCGCTCTTG 57.818 36.000 28.93 0.00 45.03 3.02
1955 4029 6.763135 TGAATAATTATTCAGCTCGCTCTTGT 59.237 34.615 28.93 0.00 45.03 3.16
1956 4030 7.280876 TGAATAATTATTCAGCTCGCTCTTGTT 59.719 33.333 28.93 0.00 45.03 2.83
1957 4031 4.871993 ATTATTCAGCTCGCTCTTGTTG 57.128 40.909 0.00 0.00 0.00 3.33
1958 4032 1.446907 ATTCAGCTCGCTCTTGTTGG 58.553 50.000 0.00 0.00 0.00 3.77
1959 4033 1.230635 TTCAGCTCGCTCTTGTTGGC 61.231 55.000 0.00 0.00 0.00 4.52
1960 4034 2.359230 AGCTCGCTCTTGTTGGCC 60.359 61.111 0.00 0.00 0.00 5.36
1961 4035 3.793144 GCTCGCTCTTGTTGGCCG 61.793 66.667 0.00 0.00 0.00 6.13
1962 4036 3.793144 CTCGCTCTTGTTGGCCGC 61.793 66.667 0.00 0.00 0.00 6.53
1963 4037 4.617520 TCGCTCTTGTTGGCCGCA 62.618 61.111 0.00 0.00 0.00 5.69
1964 4038 3.434319 CGCTCTTGTTGGCCGCAT 61.434 61.111 0.00 0.00 0.00 4.73
1965 4039 2.180017 GCTCTTGTTGGCCGCATG 59.820 61.111 0.00 2.37 0.00 4.06
1966 4040 2.180017 CTCTTGTTGGCCGCATGC 59.820 61.111 7.91 7.91 40.16 4.06
1967 4041 2.596923 TCTTGTTGGCCGCATGCA 60.597 55.556 19.57 0.00 43.89 3.96
1968 4042 1.940883 CTCTTGTTGGCCGCATGCAT 61.941 55.000 19.57 0.00 43.89 3.96
1969 4043 1.517694 CTTGTTGGCCGCATGCATC 60.518 57.895 19.57 8.10 43.89 3.91
1970 4044 3.339539 TTGTTGGCCGCATGCATCG 62.340 57.895 19.57 5.23 43.89 3.84
1971 4045 3.814268 GTTGGCCGCATGCATCGT 61.814 61.111 19.57 0.00 43.89 3.73
1972 4046 3.061231 TTGGCCGCATGCATCGTT 61.061 55.556 19.57 0.00 43.89 3.85
1973 4047 3.050166 TTGGCCGCATGCATCGTTC 62.050 57.895 19.57 1.17 43.89 3.95
1974 4048 4.256090 GGCCGCATGCATCGTTCC 62.256 66.667 19.57 4.90 43.89 3.62
1975 4049 4.596180 GCCGCATGCATCGTTCCG 62.596 66.667 19.57 0.00 40.77 4.30
1976 4050 2.889988 CCGCATGCATCGTTCCGA 60.890 61.111 19.57 0.00 41.13 4.55
1985 4059 1.227380 ATCGTTCCGATGCAGAGGC 60.227 57.895 5.43 0.00 45.24 4.70
1986 4060 2.650813 ATCGTTCCGATGCAGAGGCC 62.651 60.000 0.00 0.00 45.24 5.19
1987 4061 2.892425 GTTCCGATGCAGAGGCCG 60.892 66.667 0.00 0.00 40.13 6.13
1988 4062 4.161295 TTCCGATGCAGAGGCCGG 62.161 66.667 0.00 0.00 43.53 6.13
1990 4064 4.598894 CCGATGCAGAGGCCGGAG 62.599 72.222 5.05 0.00 44.51 4.63
2007 4081 2.868504 AGGTGAGCCTCCTTTTCCA 58.131 52.632 0.00 0.00 42.67 3.53
2008 4082 1.149101 AGGTGAGCCTCCTTTTCCAA 58.851 50.000 0.00 0.00 42.67 3.53
2009 4083 1.499007 AGGTGAGCCTCCTTTTCCAAA 59.501 47.619 0.00 0.00 42.67 3.28
2010 4084 2.091333 AGGTGAGCCTCCTTTTCCAAAA 60.091 45.455 0.00 0.00 42.67 2.44
2011 4085 2.698274 GGTGAGCCTCCTTTTCCAAAAA 59.302 45.455 0.00 0.00 0.00 1.94
2012 4086 3.324846 GGTGAGCCTCCTTTTCCAAAAAT 59.675 43.478 0.00 0.00 0.00 1.82
2013 4087 4.526650 GGTGAGCCTCCTTTTCCAAAAATA 59.473 41.667 0.00 0.00 0.00 1.40
2014 4088 5.011635 GGTGAGCCTCCTTTTCCAAAAATAA 59.988 40.000 0.00 0.00 0.00 1.40
2015 4089 6.463755 GGTGAGCCTCCTTTTCCAAAAATAAA 60.464 38.462 0.00 0.00 0.00 1.40
2016 4090 6.989759 GTGAGCCTCCTTTTCCAAAAATAAAA 59.010 34.615 0.00 0.00 0.00 1.52
2017 4091 7.661437 GTGAGCCTCCTTTTCCAAAAATAAAAT 59.339 33.333 0.00 0.00 0.00 1.82
2018 4092 8.875168 TGAGCCTCCTTTTCCAAAAATAAAATA 58.125 29.630 0.00 0.00 0.00 1.40
2019 4093 9.719355 GAGCCTCCTTTTCCAAAAATAAAATAA 57.281 29.630 0.00 0.00 0.00 1.40
2062 4136 9.817809 GTGTCTAATCTGTATCCAGTCAAATAA 57.182 33.333 0.00 0.00 39.82 1.40
2120 4196 1.136891 ACTTTCCTTGCTTGTTGGCAC 59.863 47.619 0.00 0.00 42.27 5.01
2136 4212 2.288091 TGGCACGTGGAATTTTGATGTG 60.288 45.455 18.88 0.00 0.00 3.21
2238 4315 5.487433 TGTCGATTATGGACAGATTTGTGT 58.513 37.500 5.96 0.00 39.36 3.72
2287 4364 4.150627 CGTATGAGCGTATCTTTCCATTGG 59.849 45.833 0.00 0.00 0.00 3.16
2406 4492 4.614036 GGGTGGGTGGGTGGGTTG 62.614 72.222 0.00 0.00 0.00 3.77
2407 4493 4.614036 GGTGGGTGGGTGGGTTGG 62.614 72.222 0.00 0.00 0.00 3.77
2408 4494 4.614036 GTGGGTGGGTGGGTTGGG 62.614 72.222 0.00 0.00 0.00 4.12
2527 4714 0.913934 TGGACCAAGCATAGAGGGCA 60.914 55.000 0.00 0.00 29.65 5.36
2532 4719 2.228059 CCAAGCATAGAGGGCAATCAG 58.772 52.381 0.00 0.00 0.00 2.90
2582 4944 2.954753 GCGTGGTGGCGTGAAGAAG 61.955 63.158 0.00 0.00 0.00 2.85
2734 5100 1.153107 CGCATGAGGAAGGCCATGA 60.153 57.895 5.01 0.00 41.88 3.07
2770 5136 2.049063 GTTCAGCAGCGGTCGAGT 60.049 61.111 0.00 0.00 0.00 4.18
3162 5529 0.400213 TCGGTCCAGAATTTGCAGGT 59.600 50.000 0.00 0.00 0.00 4.00
3184 5551 0.879090 GTCCGTCACCCAAAATCCAC 59.121 55.000 0.00 0.00 0.00 4.02
3218 5612 0.678048 GTGTGGAGGAAGATGGTGCC 60.678 60.000 0.00 0.00 0.00 5.01
3289 5683 3.144120 AATGCCGGTGCGTTGCAAA 62.144 52.632 0.00 0.00 44.90 3.68
3305 5699 1.202382 GCAAATCCTGAATGCTGAGGC 60.202 52.381 0.00 0.00 37.12 4.70
3474 5868 6.036577 TGAACTGCAGACATGTGATACTTA 57.963 37.500 23.35 0.00 0.00 2.24
3536 5930 8.256356 AGAGCTATTAACTGTATGAGTGGAAT 57.744 34.615 0.00 0.00 34.02 3.01
3563 5957 3.372675 GGCCAGGCCTAGAAAAATCCTTA 60.373 47.826 24.99 0.00 46.69 2.69
3697 6091 2.100197 TCTTGGACGCTACTATGCAGT 58.900 47.619 0.00 0.00 38.91 4.40
3793 6187 2.124901 CCGTCGCTTAATGGGCCA 60.125 61.111 9.61 9.61 0.00 5.36
3852 6246 4.345257 TCTCTTGCACCTTAACTCACTCTT 59.655 41.667 0.00 0.00 0.00 2.85
4054 6448 7.790823 TGTCATGTTCAACCAGATATATGTG 57.209 36.000 2.86 2.86 0.00 3.21
4113 6507 6.558771 TGAGTTGCCATATTATTTCATCCG 57.441 37.500 0.00 0.00 0.00 4.18
4194 6588 3.343941 TGTACTGGGTTGCCATCTTAC 57.656 47.619 0.00 0.00 0.00 2.34
4370 6772 5.008415 TGCCAAGTTGCCAATTTATTTTGTG 59.992 36.000 0.00 0.00 0.00 3.33
4499 6901 1.141053 ACTCCCGGGATGATTTGCTAC 59.859 52.381 27.07 0.00 0.00 3.58
4732 7135 8.112016 TGAAAATAATTACCCGTTGATTCACA 57.888 30.769 0.00 0.00 0.00 3.58
4828 7231 2.333014 GAGACAGAACACTGTAGCAGC 58.667 52.381 2.84 0.00 43.70 5.25
4847 7250 2.438254 CCCCGTGCAAGCATAGCA 60.438 61.111 0.00 0.00 40.19 3.49
4924 7327 3.117776 ACTTACCCCGTTTTTCTTCCTGT 60.118 43.478 0.00 0.00 0.00 4.00
4928 7331 0.313987 CCGTTTTTCTTCCTGTGCCC 59.686 55.000 0.00 0.00 0.00 5.36
4931 7334 0.825840 TTTTTCTTCCTGTGCCCGGG 60.826 55.000 19.09 19.09 38.61 5.73
4955 7374 1.067915 CCCCAAAACAAATCGCGATGT 60.068 47.619 24.47 15.61 0.00 3.06
5000 7424 4.069232 CGCAGGGGAGAACGAGCA 62.069 66.667 0.00 0.00 0.00 4.26
5311 7735 4.156182 GTTGTTTAACTCTATGCAACGGC 58.844 43.478 0.00 0.00 35.72 5.68
5402 7828 4.464008 TGTGAAAAGTGAGCCTGAAGAAT 58.536 39.130 0.00 0.00 0.00 2.40
5403 7829 4.276678 TGTGAAAAGTGAGCCTGAAGAATG 59.723 41.667 0.00 0.00 0.00 2.67
5560 7986 3.242936 CCCAAGTTCGTGGTAAAACTGTG 60.243 47.826 4.34 0.00 35.93 3.66
5725 8151 6.901887 CACGAGACATGCATTCAAATAGTTAC 59.098 38.462 0.00 0.00 0.00 2.50
6026 8453 2.679082 AGCATACCGAGGTAGTCCATT 58.321 47.619 8.09 0.00 33.77 3.16
6184 8611 3.760580 ATTGCAGGTATCTACTGGCTC 57.239 47.619 0.00 0.00 36.48 4.70
6213 8640 0.388907 GCATTTGTCACCTGCGCATT 60.389 50.000 12.24 0.00 0.00 3.56
6273 8700 1.066215 TCACATCGCAGCAGGTACAAT 60.066 47.619 0.00 0.00 0.00 2.71
6286 8713 6.761242 CAGCAGGTACAATATAGTTTACAGCA 59.239 38.462 12.49 0.00 0.00 4.41
6358 8785 7.755373 AGCTCTTGTCCGCTAAAAATTAATTTC 59.245 33.333 13.68 1.13 34.11 2.17
6550 8977 3.255725 CATGTAAGTTTTGCAGCCCATG 58.744 45.455 0.00 0.00 0.00 3.66
7004 9431 6.328934 TGATAAGCCAAGTCCATAGGTGATAA 59.671 38.462 0.00 0.00 0.00 1.75
7252 9679 5.392767 TGTCTTCCTGTCATCTTAGTGTC 57.607 43.478 0.00 0.00 0.00 3.67
7334 9761 5.070685 CCTTTTTGGGTTAGAGTAGCAGTT 58.929 41.667 0.00 0.00 0.00 3.16
7512 9940 4.437682 TGGAGAAACCACTGAGACAAAT 57.562 40.909 0.00 0.00 44.64 2.32
7549 9977 6.015434 ACAAAGGAAAGAGAAAACACTGTTGT 60.015 34.615 0.00 0.00 37.67 3.32
7644 10074 3.601443 TTCTTGTGGTGGGTTTTGTTG 57.399 42.857 0.00 0.00 0.00 3.33
7743 10173 6.552629 TGAGAACACGTCTTATACATCTGTC 58.447 40.000 0.00 0.00 36.41 3.51
7809 10241 3.777106 ACCTGTCTGATGCTTCTTTGA 57.223 42.857 0.88 0.00 0.00 2.69
8379 10811 2.047939 GCATGGCAAAGCACCACC 60.048 61.111 10.00 0.00 40.82 4.61
8407 10839 4.178545 GCTTTTTATGGAAGCTCAGCAA 57.821 40.909 0.00 0.00 44.63 3.91
8811 11243 2.257353 GGCTGTTGGTGCCTGTAAG 58.743 57.895 0.00 0.00 46.38 2.34
8911 11343 3.412722 TGGTACAAGGCACCAACAG 57.587 52.632 0.00 0.00 43.08 3.16
8922 11354 4.020543 AGGCACCAACAGTTAAGTTTGAA 58.979 39.130 6.73 0.00 0.00 2.69
8928 11360 8.347035 GCACCAACAGTTAAGTTTGAACTATAA 58.653 33.333 0.00 0.00 38.57 0.98
8936 11368 8.989980 AGTTAAGTTTGAACTATAACAGAGTGC 58.010 33.333 19.25 0.00 38.57 4.40
8951 11383 3.033909 AGAGTGCTGTATGCCATACTGA 58.966 45.455 21.60 7.54 42.00 3.41
8970 11402 4.036616 ACTGAAATTTGTTTTTGGCCATGC 59.963 37.500 6.09 0.00 0.00 4.06
8996 11428 2.540145 CCGGTTGGTTTCTTCTCCG 58.460 57.895 0.00 0.00 38.05 4.63
9000 11432 2.143925 GGTTGGTTTCTTCTCCGTGAG 58.856 52.381 0.00 0.00 0.00 3.51
9001 11433 2.484947 GGTTGGTTTCTTCTCCGTGAGT 60.485 50.000 1.60 0.00 0.00 3.41
9002 11434 3.203716 GTTGGTTTCTTCTCCGTGAGTT 58.796 45.455 1.60 0.00 0.00 3.01
9003 11435 4.374399 GTTGGTTTCTTCTCCGTGAGTTA 58.626 43.478 1.60 0.00 0.00 2.24
9004 11436 4.884668 TGGTTTCTTCTCCGTGAGTTAT 57.115 40.909 1.60 0.00 0.00 1.89
9005 11437 5.223449 TGGTTTCTTCTCCGTGAGTTATT 57.777 39.130 1.60 0.00 0.00 1.40
9006 11438 5.617252 TGGTTTCTTCTCCGTGAGTTATTT 58.383 37.500 1.60 0.00 0.00 1.40
9007 11439 6.761312 TGGTTTCTTCTCCGTGAGTTATTTA 58.239 36.000 1.60 0.00 0.00 1.40
9008 11440 6.647895 TGGTTTCTTCTCCGTGAGTTATTTAC 59.352 38.462 1.60 0.00 0.00 2.01
9009 11441 6.091849 GGTTTCTTCTCCGTGAGTTATTTACC 59.908 42.308 1.60 0.00 0.00 2.85
9010 11442 5.334724 TCTTCTCCGTGAGTTATTTACCC 57.665 43.478 1.60 0.00 0.00 3.69
9011 11443 4.773674 TCTTCTCCGTGAGTTATTTACCCA 59.226 41.667 1.60 0.00 0.00 4.51
9012 11444 5.246656 TCTTCTCCGTGAGTTATTTACCCAA 59.753 40.000 1.60 0.00 0.00 4.12
9013 11445 5.486735 TCTCCGTGAGTTATTTACCCAAA 57.513 39.130 1.60 0.00 0.00 3.28
9014 11446 5.867330 TCTCCGTGAGTTATTTACCCAAAA 58.133 37.500 1.60 0.00 0.00 2.44
9015 11447 5.702209 TCTCCGTGAGTTATTTACCCAAAAC 59.298 40.000 1.60 0.00 0.00 2.43
9016 11448 4.761227 TCCGTGAGTTATTTACCCAAAACC 59.239 41.667 0.00 0.00 0.00 3.27
9017 11449 4.519730 CCGTGAGTTATTTACCCAAAACCA 59.480 41.667 0.00 0.00 0.00 3.67
9018 11450 5.184287 CCGTGAGTTATTTACCCAAAACCAT 59.816 40.000 0.00 0.00 0.00 3.55
9019 11451 6.090129 CGTGAGTTATTTACCCAAAACCATG 58.910 40.000 0.00 0.00 0.00 3.66
9020 11452 6.072397 CGTGAGTTATTTACCCAAAACCATGA 60.072 38.462 0.00 0.00 0.00 3.07
9021 11453 7.088272 GTGAGTTATTTACCCAAAACCATGAC 58.912 38.462 0.00 0.00 0.00 3.06
9022 11454 6.778069 TGAGTTATTTACCCAAAACCATGACA 59.222 34.615 0.00 0.00 0.00 3.58
9023 11455 6.988522 AGTTATTTACCCAAAACCATGACAC 58.011 36.000 0.00 0.00 0.00 3.67
9024 11456 6.780522 AGTTATTTACCCAAAACCATGACACT 59.219 34.615 0.00 0.00 0.00 3.55
9025 11457 7.289084 AGTTATTTACCCAAAACCATGACACTT 59.711 33.333 0.00 0.00 0.00 3.16
9026 11458 8.578151 GTTATTTACCCAAAACCATGACACTTA 58.422 33.333 0.00 0.00 0.00 2.24
9027 11459 7.604657 ATTTACCCAAAACCATGACACTTAA 57.395 32.000 0.00 0.00 0.00 1.85
9028 11460 6.642707 TTACCCAAAACCATGACACTTAAG 57.357 37.500 0.00 0.00 0.00 1.85
9029 11461 3.895041 ACCCAAAACCATGACACTTAAGG 59.105 43.478 7.53 0.00 0.00 2.69
9030 11462 3.306019 CCCAAAACCATGACACTTAAGGC 60.306 47.826 7.53 0.00 0.00 4.35
9031 11463 3.573967 CCAAAACCATGACACTTAAGGCT 59.426 43.478 7.53 0.00 0.00 4.58
9032 11464 4.764823 CCAAAACCATGACACTTAAGGCTA 59.235 41.667 7.53 0.00 0.00 3.93
9033 11465 5.106157 CCAAAACCATGACACTTAAGGCTAG 60.106 44.000 7.53 0.00 0.00 3.42
9034 11466 3.914426 ACCATGACACTTAAGGCTAGG 57.086 47.619 7.53 3.70 0.00 3.02
9035 11467 2.505819 ACCATGACACTTAAGGCTAGGG 59.494 50.000 7.53 4.20 0.00 3.53
9036 11468 2.505819 CCATGACACTTAAGGCTAGGGT 59.494 50.000 7.53 0.00 30.27 4.34
9037 11469 3.709653 CCATGACACTTAAGGCTAGGGTA 59.290 47.826 7.53 0.00 26.99 3.69
9038 11470 4.163458 CCATGACACTTAAGGCTAGGGTAA 59.837 45.833 7.53 0.00 26.99 2.85
9039 11471 4.813750 TGACACTTAAGGCTAGGGTAAC 57.186 45.455 7.53 0.00 26.99 2.50
9040 11472 4.161876 TGACACTTAAGGCTAGGGTAACA 58.838 43.478 7.53 0.00 39.74 2.41
9041 11473 4.594062 TGACACTTAAGGCTAGGGTAACAA 59.406 41.667 7.53 0.00 39.74 2.83
9042 11474 4.903054 ACACTTAAGGCTAGGGTAACAAC 58.097 43.478 7.53 0.00 39.74 3.32
9043 11475 4.596212 ACACTTAAGGCTAGGGTAACAACT 59.404 41.667 7.53 0.00 39.74 3.16
9044 11476 5.072736 ACACTTAAGGCTAGGGTAACAACTT 59.927 40.000 7.53 0.00 39.74 2.66
9045 11477 5.411669 CACTTAAGGCTAGGGTAACAACTTG 59.588 44.000 7.53 0.00 39.74 3.16
9046 11478 3.434940 AAGGCTAGGGTAACAACTTGG 57.565 47.619 0.00 0.00 39.74 3.61
9047 11479 2.345560 AGGCTAGGGTAACAACTTGGT 58.654 47.619 0.00 0.00 39.74 3.67
9048 11480 3.523792 AGGCTAGGGTAACAACTTGGTA 58.476 45.455 0.00 0.00 39.74 3.25
9049 11481 4.109320 AGGCTAGGGTAACAACTTGGTAT 58.891 43.478 0.00 0.00 39.74 2.73
9050 11482 4.163649 AGGCTAGGGTAACAACTTGGTATC 59.836 45.833 0.00 0.00 39.74 2.24
9051 11483 4.080751 GGCTAGGGTAACAACTTGGTATCA 60.081 45.833 0.00 0.00 39.74 2.15
9052 11484 5.116882 GCTAGGGTAACAACTTGGTATCAG 58.883 45.833 0.00 0.00 39.74 2.90
9053 11485 5.105064 GCTAGGGTAACAACTTGGTATCAGA 60.105 44.000 0.00 0.00 39.74 3.27
9054 11486 6.408206 GCTAGGGTAACAACTTGGTATCAGAT 60.408 42.308 0.00 0.00 39.74 2.90
9055 11487 6.388619 AGGGTAACAACTTGGTATCAGATT 57.611 37.500 0.00 0.00 39.74 2.40
9056 11488 7.504926 AGGGTAACAACTTGGTATCAGATTA 57.495 36.000 0.00 0.00 39.74 1.75
9057 11489 8.102484 AGGGTAACAACTTGGTATCAGATTAT 57.898 34.615 0.00 0.00 39.74 1.28
9058 11490 9.220906 AGGGTAACAACTTGGTATCAGATTATA 57.779 33.333 0.00 0.00 39.74 0.98
9059 11491 9.490379 GGGTAACAACTTGGTATCAGATTATAG 57.510 37.037 0.00 0.00 39.74 1.31
9062 11494 8.873215 AACAACTTGGTATCAGATTATAGTCG 57.127 34.615 0.00 0.00 0.00 4.18
9063 11495 7.434492 ACAACTTGGTATCAGATTATAGTCGG 58.566 38.462 0.00 0.00 0.00 4.79
9064 11496 6.591750 ACTTGGTATCAGATTATAGTCGGG 57.408 41.667 0.00 0.00 0.00 5.14
9065 11497 5.480772 ACTTGGTATCAGATTATAGTCGGGG 59.519 44.000 0.00 0.00 0.00 5.73
9066 11498 3.767673 TGGTATCAGATTATAGTCGGGGC 59.232 47.826 0.00 0.00 0.00 5.80
9067 11499 3.767673 GGTATCAGATTATAGTCGGGGCA 59.232 47.826 0.00 0.00 0.00 5.36
9068 11500 3.963428 ATCAGATTATAGTCGGGGCAC 57.037 47.619 0.00 0.00 0.00 5.01
9069 11501 2.673258 TCAGATTATAGTCGGGGCACA 58.327 47.619 0.00 0.00 0.00 4.57
9070 11502 3.035363 TCAGATTATAGTCGGGGCACAA 58.965 45.455 0.00 0.00 0.00 3.33
9071 11503 3.452990 TCAGATTATAGTCGGGGCACAAA 59.547 43.478 0.00 0.00 0.00 2.83
9072 11504 4.080807 TCAGATTATAGTCGGGGCACAAAA 60.081 41.667 0.00 0.00 0.00 2.44
9073 11505 4.638421 CAGATTATAGTCGGGGCACAAAAA 59.362 41.667 0.00 0.00 0.00 1.94
9098 11530 4.789012 ACAGGAATTGTGCATGTAAAGG 57.211 40.909 0.00 0.00 38.99 3.11
9099 11531 3.511146 ACAGGAATTGTGCATGTAAAGGG 59.489 43.478 0.00 0.00 38.99 3.95
9100 11532 3.099141 AGGAATTGTGCATGTAAAGGGG 58.901 45.455 0.00 0.00 0.00 4.79
9101 11533 3.096092 GGAATTGTGCATGTAAAGGGGA 58.904 45.455 0.00 0.00 0.00 4.81
9102 11534 3.131046 GGAATTGTGCATGTAAAGGGGAG 59.869 47.826 0.00 0.00 0.00 4.30
9103 11535 2.969821 TTGTGCATGTAAAGGGGAGT 57.030 45.000 0.00 0.00 0.00 3.85
9104 11536 4.584638 ATTGTGCATGTAAAGGGGAGTA 57.415 40.909 0.00 0.00 0.00 2.59
9105 11537 3.343941 TGTGCATGTAAAGGGGAGTAC 57.656 47.619 0.00 0.00 0.00 2.73
9106 11538 2.910319 TGTGCATGTAAAGGGGAGTACT 59.090 45.455 0.00 0.00 0.00 2.73
9107 11539 3.270877 GTGCATGTAAAGGGGAGTACTG 58.729 50.000 0.00 0.00 0.00 2.74
9108 11540 3.055385 GTGCATGTAAAGGGGAGTACTGA 60.055 47.826 0.00 0.00 0.00 3.41
9109 11541 3.780294 TGCATGTAAAGGGGAGTACTGAT 59.220 43.478 0.00 0.00 0.00 2.90
9110 11542 4.227300 TGCATGTAAAGGGGAGTACTGATT 59.773 41.667 0.00 0.00 0.00 2.57
9111 11543 4.576463 GCATGTAAAGGGGAGTACTGATTG 59.424 45.833 0.00 0.00 0.00 2.67
9112 11544 5.745227 CATGTAAAGGGGAGTACTGATTGT 58.255 41.667 0.00 0.00 0.00 2.71
9113 11545 5.836024 TGTAAAGGGGAGTACTGATTGTT 57.164 39.130 0.00 0.00 0.00 2.83
9114 11546 6.195600 TGTAAAGGGGAGTACTGATTGTTT 57.804 37.500 0.00 0.00 0.00 2.83
9115 11547 6.001460 TGTAAAGGGGAGTACTGATTGTTTG 58.999 40.000 0.00 0.00 0.00 2.93
9116 11548 4.993705 AAGGGGAGTACTGATTGTTTGA 57.006 40.909 0.00 0.00 0.00 2.69
9117 11549 5.520748 AAGGGGAGTACTGATTGTTTGAT 57.479 39.130 0.00 0.00 0.00 2.57
9118 11550 6.636454 AAGGGGAGTACTGATTGTTTGATA 57.364 37.500 0.00 0.00 0.00 2.15
9119 11551 6.636454 AGGGGAGTACTGATTGTTTGATAA 57.364 37.500 0.00 0.00 0.00 1.75
9120 11552 6.653989 AGGGGAGTACTGATTGTTTGATAAG 58.346 40.000 0.00 0.00 0.00 1.73
9121 11553 5.297029 GGGGAGTACTGATTGTTTGATAAGC 59.703 44.000 0.00 0.00 0.00 3.09
9122 11554 6.116126 GGGAGTACTGATTGTTTGATAAGCT 58.884 40.000 0.00 0.00 0.00 3.74
9123 11555 6.258947 GGGAGTACTGATTGTTTGATAAGCTC 59.741 42.308 0.00 0.00 0.00 4.09
9124 11556 6.818644 GGAGTACTGATTGTTTGATAAGCTCA 59.181 38.462 0.00 0.00 0.00 4.26
9125 11557 7.497249 GGAGTACTGATTGTTTGATAAGCTCAT 59.503 37.037 0.00 0.00 32.72 2.90
9126 11558 8.206325 AGTACTGATTGTTTGATAAGCTCATG 57.794 34.615 0.00 0.00 32.72 3.07
9127 11559 5.888105 ACTGATTGTTTGATAAGCTCATGC 58.112 37.500 0.00 0.00 40.05 4.06
9128 11560 5.416639 ACTGATTGTTTGATAAGCTCATGCA 59.583 36.000 0.00 0.00 42.74 3.96
9129 11561 6.071784 ACTGATTGTTTGATAAGCTCATGCAA 60.072 34.615 0.00 0.00 42.74 4.08
9130 11562 6.689554 TGATTGTTTGATAAGCTCATGCAAA 58.310 32.000 0.00 0.00 42.74 3.68
9131 11563 6.587226 TGATTGTTTGATAAGCTCATGCAAAC 59.413 34.615 19.20 19.20 45.03 2.93
9134 11566 5.464168 GTTTGATAAGCTCATGCAAACAGT 58.536 37.500 20.26 0.00 44.50 3.55
9135 11567 4.690184 TGATAAGCTCATGCAAACAGTG 57.310 40.909 0.00 0.00 42.74 3.66
9136 11568 4.325972 TGATAAGCTCATGCAAACAGTGA 58.674 39.130 0.00 0.00 42.74 3.41
9137 11569 4.761227 TGATAAGCTCATGCAAACAGTGAA 59.239 37.500 0.00 0.00 42.74 3.18
9138 11570 5.241285 TGATAAGCTCATGCAAACAGTGAAA 59.759 36.000 0.00 0.00 42.74 2.69
9139 11571 3.360249 AGCTCATGCAAACAGTGAAAC 57.640 42.857 0.00 0.00 42.74 2.78
9140 11572 2.954318 AGCTCATGCAAACAGTGAAACT 59.046 40.909 0.00 0.00 46.71 2.66
9156 11588 5.119694 GTGAAACTGATAAGATGAGGGTCC 58.880 45.833 0.00 0.00 0.00 4.46
9157 11589 4.164221 TGAAACTGATAAGATGAGGGTCCC 59.836 45.833 0.00 0.00 0.00 4.46
9158 11590 3.421394 ACTGATAAGATGAGGGTCCCA 57.579 47.619 11.55 0.00 0.00 4.37
9159 11591 3.041946 ACTGATAAGATGAGGGTCCCAC 58.958 50.000 11.55 4.12 0.00 4.61
9160 11592 3.310954 ACTGATAAGATGAGGGTCCCACT 60.311 47.826 11.55 0.81 0.00 4.00
9161 11593 3.713764 CTGATAAGATGAGGGTCCCACTT 59.286 47.826 11.55 11.91 0.00 3.16
9162 11594 3.455910 TGATAAGATGAGGGTCCCACTTG 59.544 47.826 11.55 0.00 0.00 3.16
9163 11595 1.747444 AAGATGAGGGTCCCACTTGT 58.253 50.000 11.55 0.00 0.00 3.16
9164 11596 2.642171 AGATGAGGGTCCCACTTGTA 57.358 50.000 11.55 0.00 0.00 2.41
9165 11597 2.915869 AGATGAGGGTCCCACTTGTAA 58.084 47.619 11.55 0.00 0.00 2.41
9166 11598 3.256704 AGATGAGGGTCCCACTTGTAAA 58.743 45.455 11.55 0.00 0.00 2.01
9167 11599 3.852578 AGATGAGGGTCCCACTTGTAAAT 59.147 43.478 11.55 0.00 0.00 1.40
9168 11600 3.433306 TGAGGGTCCCACTTGTAAATG 57.567 47.619 11.55 0.00 0.00 2.32
9169 11601 2.983192 TGAGGGTCCCACTTGTAAATGA 59.017 45.455 11.55 0.00 0.00 2.57
9170 11602 3.244770 TGAGGGTCCCACTTGTAAATGAC 60.245 47.826 11.55 0.00 0.00 3.06
9171 11603 2.986728 AGGGTCCCACTTGTAAATGACT 59.013 45.455 11.55 0.00 0.00 3.41
9172 11604 3.397955 AGGGTCCCACTTGTAAATGACTT 59.602 43.478 11.55 0.00 0.00 3.01
9173 11605 4.600111 AGGGTCCCACTTGTAAATGACTTA 59.400 41.667 11.55 0.00 0.00 2.24
9174 11606 5.073965 AGGGTCCCACTTGTAAATGACTTAA 59.926 40.000 11.55 0.00 0.00 1.85
9175 11607 5.414765 GGGTCCCACTTGTAAATGACTTAAG 59.585 44.000 1.78 0.00 0.00 1.85
9176 11608 6.002082 GGTCCCACTTGTAAATGACTTAAGT 58.998 40.000 8.13 8.13 32.23 2.24
9177 11609 6.072673 GGTCCCACTTGTAAATGACTTAAGTG 60.073 42.308 14.14 0.00 44.68 3.16
9178 11610 6.485648 GTCCCACTTGTAAATGACTTAAGTGT 59.514 38.462 14.14 0.00 43.99 3.55
9179 11611 7.012989 GTCCCACTTGTAAATGACTTAAGTGTT 59.987 37.037 14.14 4.94 43.99 3.32
9180 11612 7.558444 TCCCACTTGTAAATGACTTAAGTGTTT 59.442 33.333 14.14 15.22 43.99 2.83
9181 11613 8.842280 CCCACTTGTAAATGACTTAAGTGTTTA 58.158 33.333 14.14 14.27 43.99 2.01
9204 11636 6.782082 ATCTTTATTTCTTTTCTCCTGGGC 57.218 37.500 0.00 0.00 0.00 5.36
9205 11637 5.016831 TCTTTATTTCTTTTCTCCTGGGCC 58.983 41.667 0.00 0.00 0.00 5.80
9206 11638 4.675063 TTATTTCTTTTCTCCTGGGCCT 57.325 40.909 4.53 0.00 0.00 5.19
9207 11639 3.549898 ATTTCTTTTCTCCTGGGCCTT 57.450 42.857 4.53 0.00 0.00 4.35
9208 11640 3.328535 TTTCTTTTCTCCTGGGCCTTT 57.671 42.857 4.53 0.00 0.00 3.11
9209 11641 2.586648 TCTTTTCTCCTGGGCCTTTC 57.413 50.000 4.53 0.00 0.00 2.62
9210 11642 1.780309 TCTTTTCTCCTGGGCCTTTCA 59.220 47.619 4.53 0.00 0.00 2.69
9211 11643 2.176798 TCTTTTCTCCTGGGCCTTTCAA 59.823 45.455 4.53 0.00 0.00 2.69
9212 11644 1.995376 TTTCTCCTGGGCCTTTCAAC 58.005 50.000 4.53 0.00 0.00 3.18
9213 11645 0.850100 TTCTCCTGGGCCTTTCAACA 59.150 50.000 4.53 0.00 0.00 3.33
9214 11646 0.850100 TCTCCTGGGCCTTTCAACAA 59.150 50.000 4.53 0.00 0.00 2.83
9215 11647 1.216678 TCTCCTGGGCCTTTCAACAAA 59.783 47.619 4.53 0.00 0.00 2.83
9216 11648 1.341209 CTCCTGGGCCTTTCAACAAAC 59.659 52.381 4.53 0.00 0.00 2.93
9217 11649 1.118838 CCTGGGCCTTTCAACAAACA 58.881 50.000 4.53 0.00 0.00 2.83
9218 11650 1.202521 CCTGGGCCTTTCAACAAACAC 60.203 52.381 4.53 0.00 0.00 3.32
9219 11651 0.457851 TGGGCCTTTCAACAAACACG 59.542 50.000 4.53 0.00 0.00 4.49
9220 11652 0.458260 GGGCCTTTCAACAAACACGT 59.542 50.000 0.84 0.00 0.00 4.49
9221 11653 1.677052 GGGCCTTTCAACAAACACGTA 59.323 47.619 0.84 0.00 0.00 3.57
9222 11654 2.295070 GGGCCTTTCAACAAACACGTAT 59.705 45.455 0.84 0.00 0.00 3.06
9223 11655 3.243602 GGGCCTTTCAACAAACACGTATT 60.244 43.478 0.84 0.00 0.00 1.89
9224 11656 3.733727 GGCCTTTCAACAAACACGTATTG 59.266 43.478 10.71 10.71 0.00 1.90
9225 11657 3.733727 GCCTTTCAACAAACACGTATTGG 59.266 43.478 15.27 0.00 32.02 3.16
9226 11658 4.295051 CCTTTCAACAAACACGTATTGGG 58.705 43.478 15.27 8.69 32.02 4.12
9227 11659 3.357166 TTCAACAAACACGTATTGGGC 57.643 42.857 15.27 0.00 32.02 5.36
9228 11660 1.264557 TCAACAAACACGTATTGGGCG 59.735 47.619 15.27 5.71 32.02 6.13
9229 11661 1.264557 CAACAAACACGTATTGGGCGA 59.735 47.619 15.27 0.00 32.02 5.54
9230 11662 0.869730 ACAAACACGTATTGGGCGAC 59.130 50.000 15.27 0.00 32.02 5.19
9231 11663 0.869068 CAAACACGTATTGGGCGACA 59.131 50.000 0.00 0.00 0.00 4.35
9232 11664 1.466950 CAAACACGTATTGGGCGACAT 59.533 47.619 0.00 0.00 0.00 3.06
9233 11665 1.365699 AACACGTATTGGGCGACATC 58.634 50.000 0.00 0.00 0.00 3.06
9234 11666 0.535335 ACACGTATTGGGCGACATCT 59.465 50.000 0.00 0.00 0.00 2.90
9235 11667 1.752498 ACACGTATTGGGCGACATCTA 59.248 47.619 0.00 0.00 0.00 1.98
9236 11668 2.364324 ACACGTATTGGGCGACATCTAT 59.636 45.455 0.00 0.00 0.00 1.98
9237 11669 2.731451 CACGTATTGGGCGACATCTATG 59.269 50.000 0.00 0.00 0.00 2.23
9238 11670 1.726791 CGTATTGGGCGACATCTATGC 59.273 52.381 0.00 0.00 0.00 3.14
9239 11671 2.766313 GTATTGGGCGACATCTATGCA 58.234 47.619 0.00 0.00 0.00 3.96
9240 11672 2.574006 ATTGGGCGACATCTATGCAT 57.426 45.000 3.79 3.79 0.00 3.96
9241 11673 3.701205 ATTGGGCGACATCTATGCATA 57.299 42.857 6.20 6.20 0.00 3.14
9242 11674 3.701205 TTGGGCGACATCTATGCATAT 57.299 42.857 6.92 0.00 0.00 1.78
9243 11675 2.976589 TGGGCGACATCTATGCATATG 58.023 47.619 6.92 7.39 0.00 1.78
9244 11676 2.302733 TGGGCGACATCTATGCATATGT 59.697 45.455 13.70 13.70 39.00 2.29
9245 11677 2.674852 GGGCGACATCTATGCATATGTG 59.325 50.000 17.76 15.62 36.48 3.21
9279 11711 4.492160 CGACGCTCGCTGCCCTTA 62.492 66.667 0.00 0.00 38.78 2.69
9280 11712 2.583593 GACGCTCGCTGCCCTTAG 60.584 66.667 0.00 0.00 38.78 2.18
9281 11713 3.358076 GACGCTCGCTGCCCTTAGT 62.358 63.158 0.00 0.00 38.78 2.24
9282 11714 2.887568 CGCTCGCTGCCCTTAGTG 60.888 66.667 0.00 0.00 38.78 2.74
9283 11715 2.512515 GCTCGCTGCCCTTAGTGG 60.513 66.667 0.00 0.00 35.15 4.00
9284 11716 2.982130 CTCGCTGCCCTTAGTGGT 59.018 61.111 0.00 0.00 0.00 4.16
9285 11717 1.153549 CTCGCTGCCCTTAGTGGTC 60.154 63.158 0.00 0.00 0.00 4.02
9286 11718 2.509336 CGCTGCCCTTAGTGGTCG 60.509 66.667 0.00 0.00 0.00 4.79
9287 11719 2.978824 GCTGCCCTTAGTGGTCGA 59.021 61.111 0.00 0.00 0.00 4.20
9288 11720 1.448013 GCTGCCCTTAGTGGTCGAC 60.448 63.158 7.13 7.13 0.00 4.20
9289 11721 1.153823 CTGCCCTTAGTGGTCGACG 60.154 63.158 9.92 0.00 0.00 5.12
9290 11722 2.183555 GCCCTTAGTGGTCGACGG 59.816 66.667 9.92 4.19 0.00 4.79
9291 11723 2.643232 GCCCTTAGTGGTCGACGGT 61.643 63.158 9.92 0.00 0.00 4.83
9292 11724 1.509923 CCCTTAGTGGTCGACGGTC 59.490 63.158 9.92 0.00 0.00 4.79
9293 11725 1.246056 CCCTTAGTGGTCGACGGTCA 61.246 60.000 9.92 0.00 0.00 4.02
9294 11726 0.815734 CCTTAGTGGTCGACGGTCAT 59.184 55.000 9.92 0.00 0.00 3.06
9295 11727 1.203994 CCTTAGTGGTCGACGGTCATT 59.796 52.381 9.92 1.55 0.00 2.57
9296 11728 2.527100 CTTAGTGGTCGACGGTCATTC 58.473 52.381 9.92 0.00 0.00 2.67
9297 11729 0.448990 TAGTGGTCGACGGTCATTCG 59.551 55.000 9.92 0.00 37.85 3.34
9298 11730 1.210931 GTGGTCGACGGTCATTCGA 59.789 57.895 9.92 0.00 43.07 3.71
9299 11731 0.797249 GTGGTCGACGGTCATTCGAG 60.797 60.000 9.92 0.00 45.76 4.04
9300 11732 0.956902 TGGTCGACGGTCATTCGAGA 60.957 55.000 9.92 0.00 45.76 4.04
9301 11733 0.522915 GGTCGACGGTCATTCGAGAC 60.523 60.000 9.92 6.06 45.76 3.36
9307 11739 4.094684 GTCATTCGAGACCTGCCG 57.905 61.111 0.00 0.00 32.36 5.69
9308 11740 1.215647 GTCATTCGAGACCTGCCGT 59.784 57.895 0.00 0.00 32.36 5.68
9609 12041 4.681978 ACCTGCGTTCGAGGCCAC 62.682 66.667 5.01 0.00 33.39 5.01
9627 12059 4.530857 GTCCCGTCGCTCCCCATG 62.531 72.222 0.00 0.00 0.00 3.66
9628 12060 4.770362 TCCCGTCGCTCCCCATGA 62.770 66.667 0.00 0.00 0.00 3.07
9646 12078 4.512914 GCCCCTGATGCCACCTCC 62.513 72.222 0.00 0.00 0.00 4.30
9658 12090 2.519780 ACCTCCCGGAGCTCGATC 60.520 66.667 9.17 0.00 42.43 3.69
9713 12192 3.250323 CGACGCTCGACCATGCTG 61.250 66.667 0.00 0.00 43.74 4.41
9714 12193 3.558411 GACGCTCGACCATGCTGC 61.558 66.667 0.00 0.00 0.00 5.25
9718 12197 3.790437 CTCGACCATGCTGCCCCT 61.790 66.667 0.00 0.00 0.00 4.79
9719 12198 4.100084 TCGACCATGCTGCCCCTG 62.100 66.667 0.00 0.00 0.00 4.45
9748 12227 0.326264 AGTAGCCAGAGCCCACTTTG 59.674 55.000 0.00 0.00 41.25 2.77
9784 12263 3.799755 GAACGCCATGGACGCCAC 61.800 66.667 18.40 9.66 35.80 5.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 0.242825 GCATGCTCTGTTGTGTGCAT 59.757 50.000 11.37 0.00 44.63 3.96
94 95 4.771114 AGTTATGTATGCCCTACTGCAA 57.229 40.909 0.00 0.00 45.84 4.08
96 97 5.607477 TGTTAGTTATGTATGCCCTACTGC 58.393 41.667 0.00 0.00 0.00 4.40
309 310 6.194235 AGGGTCTTGAGCTATATCTGATAGG 58.806 44.000 3.48 0.66 0.00 2.57
319 320 3.549794 GATTGCAAGGGTCTTGAGCTAT 58.450 45.455 4.94 0.40 0.00 2.97
336 337 1.137872 CTCTCTTGAGGACCCGGATTG 59.862 57.143 0.73 0.00 36.70 2.67
402 410 6.048509 AGGATTTCGTTTGATTTGCTTTGTT 58.951 32.000 0.00 0.00 0.00 2.83
458 466 4.690748 GGAGCTAAGGTTTGGAAAATTTGC 59.309 41.667 0.00 0.00 0.00 3.68
727 755 3.444805 GCTGACTCGGACGAGCCT 61.445 66.667 20.46 3.11 45.54 4.58
834 862 1.604278 GAGACGTTGCAAAAGAGGCTT 59.396 47.619 0.00 0.00 0.00 4.35
893 921 8.716674 AGGCATTCAAAATAGATTGGTATCAT 57.283 30.769 0.00 0.00 32.95 2.45
911 939 7.869429 CCCAAAAGTATCATAATTGAGGCATTC 59.131 37.037 0.00 0.00 34.73 2.67
918 946 7.118723 AGTGAGCCCAAAAGTATCATAATTGA 58.881 34.615 0.00 0.00 36.00 2.57
939 967 1.055849 TGGACTGCTGGCTTTAGTGA 58.944 50.000 0.00 0.00 0.00 3.41
940 968 2.119801 ATGGACTGCTGGCTTTAGTG 57.880 50.000 0.00 0.00 0.00 2.74
944 972 3.084786 GTTTCTATGGACTGCTGGCTTT 58.915 45.455 0.00 0.00 0.00 3.51
1057 1085 2.691011 ACGGCTTGAGAGGAGAGATTAC 59.309 50.000 0.00 0.00 0.00 1.89
1391 1423 4.083862 GACAGGGCGGGGTGAGAC 62.084 72.222 0.00 0.00 0.00 3.36
1527 1563 3.366052 ACTAAAATCGACCCCAAGCAT 57.634 42.857 0.00 0.00 0.00 3.79
1564 3018 4.201990 GCTCCCACAAAATCTAGCAATCAG 60.202 45.833 0.00 0.00 0.00 2.90
1621 3075 0.037605 CCTCAACCACGGGACAGTAC 60.038 60.000 0.00 0.00 0.00 2.73
1727 3801 2.691526 ACCGTTGGAGATTACGCTATGA 59.308 45.455 0.00 0.00 36.49 2.15
1839 3913 2.738846 CACACGGAAGAGAAGATTGTGG 59.261 50.000 0.00 0.00 31.29 4.17
1841 3915 3.753294 ACACACGGAAGAGAAGATTGT 57.247 42.857 0.00 0.00 0.00 2.71
1882 3956 0.108424 GGCAAAATACATGCGGCCAA 60.108 50.000 2.24 0.00 44.75 4.52
1883 3957 0.969917 AGGCAAAATACATGCGGCCA 60.970 50.000 2.24 0.00 44.75 5.36
1884 3958 0.249031 GAGGCAAAATACATGCGGCC 60.249 55.000 0.00 0.00 44.75 6.13
1885 3959 0.592247 CGAGGCAAAATACATGCGGC 60.592 55.000 0.00 0.00 44.75 6.53
1886 3960 0.732571 ACGAGGCAAAATACATGCGG 59.267 50.000 0.00 0.00 44.75 5.69
1887 3961 1.531677 CCACGAGGCAAAATACATGCG 60.532 52.381 0.00 0.00 44.75 4.73
1888 3962 1.472480 ACCACGAGGCAAAATACATGC 59.528 47.619 0.00 0.00 43.08 4.06
1889 3963 2.159393 CCACCACGAGGCAAAATACATG 60.159 50.000 0.00 0.00 39.06 3.21
1890 3964 2.091541 CCACCACGAGGCAAAATACAT 58.908 47.619 0.00 0.00 39.06 2.29
1891 3965 1.529226 CCACCACGAGGCAAAATACA 58.471 50.000 0.00 0.00 39.06 2.29
1892 3966 0.808755 CCCACCACGAGGCAAAATAC 59.191 55.000 0.00 0.00 39.06 1.89
1893 3967 0.402504 ACCCACCACGAGGCAAAATA 59.597 50.000 0.00 0.00 39.06 1.40
1894 3968 1.152830 ACCCACCACGAGGCAAAAT 59.847 52.632 0.00 0.00 39.06 1.82
1895 3969 1.826054 CACCCACCACGAGGCAAAA 60.826 57.895 0.00 0.00 39.06 2.44
1896 3970 2.203280 CACCCACCACGAGGCAAA 60.203 61.111 0.00 0.00 39.06 3.68
1897 3971 4.947147 GCACCCACCACGAGGCAA 62.947 66.667 0.00 0.00 39.06 4.52
1900 3974 4.704833 CCAGCACCCACCACGAGG 62.705 72.222 0.00 0.00 42.21 4.63
1906 3980 2.499303 AATACCAGCCAGCACCCACC 62.499 60.000 0.00 0.00 0.00 4.61
1907 3981 0.611896 AAATACCAGCCAGCACCCAC 60.612 55.000 0.00 0.00 0.00 4.61
1908 3982 0.114168 AAAATACCAGCCAGCACCCA 59.886 50.000 0.00 0.00 0.00 4.51
1909 3983 0.532115 CAAAATACCAGCCAGCACCC 59.468 55.000 0.00 0.00 0.00 4.61
1910 3984 1.544724 TCAAAATACCAGCCAGCACC 58.455 50.000 0.00 0.00 0.00 5.01
1911 3985 2.754552 TCATCAAAATACCAGCCAGCAC 59.245 45.455 0.00 0.00 0.00 4.40
1912 3986 3.084536 TCATCAAAATACCAGCCAGCA 57.915 42.857 0.00 0.00 0.00 4.41
1913 3987 4.660789 ATTCATCAAAATACCAGCCAGC 57.339 40.909 0.00 0.00 0.00 4.85
1930 4004 6.763135 ACAAGAGCGAGCTGAATAATTATTCA 59.237 34.615 29.94 29.94 46.99 2.57
1931 4005 7.183580 ACAAGAGCGAGCTGAATAATTATTC 57.816 36.000 25.14 25.14 41.81 1.75
1932 4006 7.412853 CAACAAGAGCGAGCTGAATAATTATT 58.587 34.615 10.51 10.51 0.00 1.40
1933 4007 6.017605 CCAACAAGAGCGAGCTGAATAATTAT 60.018 38.462 0.84 0.00 0.00 1.28
1934 4008 5.294306 CCAACAAGAGCGAGCTGAATAATTA 59.706 40.000 0.84 0.00 0.00 1.40
1935 4009 4.095483 CCAACAAGAGCGAGCTGAATAATT 59.905 41.667 0.84 0.00 0.00 1.40
1936 4010 3.624861 CCAACAAGAGCGAGCTGAATAAT 59.375 43.478 0.84 0.00 0.00 1.28
1937 4011 3.002791 CCAACAAGAGCGAGCTGAATAA 58.997 45.455 0.84 0.00 0.00 1.40
1938 4012 2.621338 CCAACAAGAGCGAGCTGAATA 58.379 47.619 0.84 0.00 0.00 1.75
1939 4013 1.446907 CCAACAAGAGCGAGCTGAAT 58.553 50.000 0.84 0.00 0.00 2.57
1940 4014 1.230635 GCCAACAAGAGCGAGCTGAA 61.231 55.000 0.84 0.00 0.00 3.02
1941 4015 1.669115 GCCAACAAGAGCGAGCTGA 60.669 57.895 0.84 0.00 0.00 4.26
1942 4016 2.684843 GGCCAACAAGAGCGAGCTG 61.685 63.158 0.84 0.00 0.00 4.24
1943 4017 2.359230 GGCCAACAAGAGCGAGCT 60.359 61.111 0.00 0.00 0.00 4.09
1944 4018 3.793144 CGGCCAACAAGAGCGAGC 61.793 66.667 2.24 0.00 0.00 5.03
1945 4019 3.793144 GCGGCCAACAAGAGCGAG 61.793 66.667 2.24 0.00 0.00 5.03
1946 4020 3.899981 ATGCGGCCAACAAGAGCGA 62.900 57.895 2.24 0.00 0.00 4.93
1947 4021 3.434319 ATGCGGCCAACAAGAGCG 61.434 61.111 2.24 0.00 0.00 5.03
1948 4022 2.180017 CATGCGGCCAACAAGAGC 59.820 61.111 2.24 0.00 0.00 4.09
1949 4023 1.940883 ATGCATGCGGCCAACAAGAG 61.941 55.000 14.09 0.00 43.89 2.85
1950 4024 1.936436 GATGCATGCGGCCAACAAGA 61.936 55.000 14.09 0.00 43.89 3.02
1951 4025 1.517694 GATGCATGCGGCCAACAAG 60.518 57.895 14.09 0.00 43.89 3.16
1952 4026 2.572812 GATGCATGCGGCCAACAA 59.427 55.556 14.09 0.00 43.89 2.83
1953 4027 3.813143 CGATGCATGCGGCCAACA 61.813 61.111 14.09 0.00 43.89 3.33
1954 4028 3.340953 AACGATGCATGCGGCCAAC 62.341 57.895 14.09 0.00 43.89 3.77
1955 4029 3.050166 GAACGATGCATGCGGCCAA 62.050 57.895 14.09 0.00 43.89 4.52
1956 4030 3.507924 GAACGATGCATGCGGCCA 61.508 61.111 14.09 0.00 43.89 5.36
1957 4031 4.256090 GGAACGATGCATGCGGCC 62.256 66.667 14.09 9.92 43.89 6.13
1970 4044 2.892425 CGGCCTCTGCATCGGAAC 60.892 66.667 0.00 0.00 40.13 3.62
1971 4045 4.161295 CCGGCCTCTGCATCGGAA 62.161 66.667 0.00 0.00 42.71 4.30
1973 4047 4.598894 CTCCGGCCTCTGCATCGG 62.599 72.222 0.00 0.00 41.82 4.18
1974 4048 4.598894 CCTCCGGCCTCTGCATCG 62.599 72.222 0.00 0.00 40.13 3.84
1975 4049 3.474570 ACCTCCGGCCTCTGCATC 61.475 66.667 0.00 0.00 40.13 3.91
1976 4050 3.790437 CACCTCCGGCCTCTGCAT 61.790 66.667 0.00 0.00 40.13 3.96
1978 4052 4.154347 CTCACCTCCGGCCTCTGC 62.154 72.222 0.00 0.00 0.00 4.26
1979 4053 4.154347 GCTCACCTCCGGCCTCTG 62.154 72.222 0.00 0.00 0.00 3.35
1990 4064 1.995376 TTTGGAAAAGGAGGCTCACC 58.005 50.000 17.69 11.14 0.00 4.02
1991 4065 4.607293 ATTTTTGGAAAAGGAGGCTCAC 57.393 40.909 17.69 5.85 0.00 3.51
1992 4066 6.739331 TTTATTTTTGGAAAAGGAGGCTCA 57.261 33.333 17.69 0.00 0.00 4.26
1993 4067 9.719355 TTATTTTATTTTTGGAAAAGGAGGCTC 57.281 29.630 5.78 5.78 0.00 4.70
2025 4099 9.973450 GATACAGATTAGACACAAGATACATGT 57.027 33.333 2.69 2.69 0.00 3.21
2026 4100 9.416794 GGATACAGATTAGACACAAGATACATG 57.583 37.037 0.00 0.00 0.00 3.21
2027 4101 9.147732 TGGATACAGATTAGACACAAGATACAT 57.852 33.333 0.00 0.00 46.17 2.29
2028 4102 8.533569 TGGATACAGATTAGACACAAGATACA 57.466 34.615 0.00 0.00 46.17 2.29
2062 4136 2.770164 ACTCGCAAAAGTATGGCTCT 57.230 45.000 0.00 0.00 0.00 4.09
2120 4196 4.235939 TCCAACACATCAAAATTCCACG 57.764 40.909 0.00 0.00 0.00 4.94
2162 4238 9.753674 AGAAGAACATGGATTTTCTTGGTATAA 57.246 29.630 12.34 0.00 41.21 0.98
2287 4364 5.686913 GCCCCTGTAATTTCTACCCTTCTAC 60.687 48.000 0.00 0.00 0.00 2.59
2396 4482 1.439524 ATTGTAGCCCAACCCACCCA 61.440 55.000 0.00 0.00 35.44 4.51
2397 4483 0.252057 AATTGTAGCCCAACCCACCC 60.252 55.000 0.00 0.00 35.44 4.61
2398 4484 2.517998 TAATTGTAGCCCAACCCACC 57.482 50.000 0.00 0.00 35.44 4.61
2399 4485 4.020543 TGAATAATTGTAGCCCAACCCAC 58.979 43.478 0.00 0.00 35.44 4.61
2400 4486 4.277476 CTGAATAATTGTAGCCCAACCCA 58.723 43.478 0.00 0.00 35.44 4.51
2401 4487 3.636764 CCTGAATAATTGTAGCCCAACCC 59.363 47.826 0.00 0.00 35.44 4.11
2402 4488 4.278310 ACCTGAATAATTGTAGCCCAACC 58.722 43.478 0.00 0.00 35.44 3.77
2403 4489 5.650543 CAACCTGAATAATTGTAGCCCAAC 58.349 41.667 0.00 0.00 35.44 3.77
2404 4490 4.159506 GCAACCTGAATAATTGTAGCCCAA 59.840 41.667 0.00 0.00 37.49 4.12
2405 4491 3.699038 GCAACCTGAATAATTGTAGCCCA 59.301 43.478 0.00 0.00 0.00 5.36
2406 4492 3.699038 TGCAACCTGAATAATTGTAGCCC 59.301 43.478 0.00 0.00 0.00 5.19
2407 4493 4.202050 CCTGCAACCTGAATAATTGTAGCC 60.202 45.833 0.00 0.00 35.47 3.93
2408 4494 4.202050 CCCTGCAACCTGAATAATTGTAGC 60.202 45.833 0.00 0.00 35.47 3.58
2409 4495 5.066505 GTCCCTGCAACCTGAATAATTGTAG 59.933 44.000 0.00 0.00 36.26 2.74
2527 4714 4.410099 TCAAAAGTCCTGGATTGCTGATT 58.590 39.130 0.00 0.00 0.00 2.57
2532 4719 3.056322 AGCATTCAAAAGTCCTGGATTGC 60.056 43.478 0.00 0.00 37.07 3.56
2570 4922 1.300620 CACCGACTTCTTCACGCCA 60.301 57.895 0.00 0.00 0.00 5.69
2675 5037 1.674441 CCAGAATACCACATGCAGCAG 59.326 52.381 0.00 0.00 0.00 4.24
2770 5136 3.227614 GGTTTTCCTTTGGTTAGCTGGA 58.772 45.455 0.00 0.00 36.94 3.86
3016 5383 2.357465 CCAGGCCTTGATCCAAGATTCA 60.357 50.000 0.00 0.00 43.42 2.57
3162 5529 1.228003 ATTTTGGGTGACGGACGCA 60.228 52.632 2.94 2.94 45.30 5.24
3184 5551 0.319900 CACACTGACCCTCCACTTCG 60.320 60.000 0.00 0.00 0.00 3.79
3195 5562 1.625818 ACCATCTTCCTCCACACTGAC 59.374 52.381 0.00 0.00 0.00 3.51
3218 5612 2.034999 TGGCCCTAAACGCCCTTG 59.965 61.111 0.00 0.00 46.48 3.61
3254 5648 1.134699 CATTGCTCTTCGGGTGCTCTA 60.135 52.381 0.00 0.00 35.67 2.43
3289 5683 1.147824 CGGCCTCAGCATTCAGGAT 59.852 57.895 0.00 0.00 42.56 3.24
3474 5868 7.201794 GCTACAGTCCACTTTTAACTTTTTCCT 60.202 37.037 0.00 0.00 0.00 3.36
3697 6091 0.961857 AAACATCAGATGCTGCGCCA 60.962 50.000 10.59 0.00 0.00 5.69
3764 6158 3.702048 CGACGGGAGGGGCTCAAA 61.702 66.667 0.00 0.00 31.08 2.69
3793 6187 1.561542 AGAGATTGGCCGAGTTTGGAT 59.438 47.619 0.00 0.00 0.00 3.41
3852 6246 1.822506 TTGGTGGTGAAAACGACACA 58.177 45.000 0.00 0.00 39.65 3.72
3980 6374 4.432980 TGGCAATCATGTCAGATCATCT 57.567 40.909 0.00 0.00 35.91 2.90
4054 6448 4.021544 TGGAAATTGCATGTAAACCTGGTC 60.022 41.667 0.00 0.00 0.00 4.02
4113 6507 0.319555 TGTAGACAGCACGACAAGCC 60.320 55.000 0.00 0.00 0.00 4.35
4194 6588 9.425893 CGCATAAACAGAACAAGTAATATGAAG 57.574 33.333 0.00 0.00 0.00 3.02
4370 6772 3.243336 TGTGTGTAAACAAAACGCCAAC 58.757 40.909 0.00 0.00 0.00 3.77
4499 6901 3.680937 AGCACAAATTGAAATGGCAATCG 59.319 39.130 0.00 0.00 37.50 3.34
4561 6964 7.403312 TCACCTTGAGAAGTTCAATTTTTCA 57.597 32.000 5.50 0.00 44.48 2.69
4847 7250 0.465460 ACATTGAGCACCACCGTTGT 60.465 50.000 0.00 0.00 0.00 3.32
4873 7276 0.385974 GCTGTGGTTTGCTACAAGCG 60.386 55.000 0.00 0.00 46.26 4.68
4906 7309 1.687563 CACAGGAAGAAAAACGGGGT 58.312 50.000 0.00 0.00 0.00 4.95
4931 7334 1.295101 CGATTTGTTTTGGGGGCCC 59.705 57.895 15.76 15.76 0.00 5.80
4955 7374 7.494211 TCGGCTCTGCATAAACTAAATAGTAA 58.506 34.615 0.00 0.00 34.99 2.24
5000 7424 3.631250 AGGGAAAATCCAACATACGCAT 58.369 40.909 0.00 0.00 38.64 4.73
5131 7555 1.669604 TGCTTGCACCGTTCTTGTAA 58.330 45.000 0.00 0.00 0.00 2.41
5132 7556 1.669604 TTGCTTGCACCGTTCTTGTA 58.330 45.000 0.00 0.00 0.00 2.41
5402 7828 9.998106 GAAGTTCCAATTATATAGAGCTAACCA 57.002 33.333 0.00 0.00 0.00 3.67
5560 7986 9.944376 TCTTGCCTATTTGAATACTGGATATAC 57.056 33.333 0.00 0.00 0.00 1.47
5725 8151 9.030301 ACATTACAAAACGGAAAAAGAATTCAG 57.970 29.630 8.44 0.00 0.00 3.02
6026 8453 8.296713 GTGAATTGCCAACTCAGAGTAATAAAA 58.703 33.333 2.64 0.00 0.00 1.52
6184 8611 2.375110 GTGACAAATGCTGACGTGTTG 58.625 47.619 0.00 0.00 0.00 3.33
6213 8640 4.764679 ATCTTTGTGCGCAGAAAATGTA 57.235 36.364 29.39 17.20 0.00 2.29
6358 8785 5.351465 ACACTGTTACAAACTTGTGTCTCTG 59.649 40.000 5.34 0.00 41.83 3.35
6550 8977 4.429854 AATCTTCCCATCAGAGCCTAAC 57.570 45.455 0.00 0.00 0.00 2.34
7004 9431 6.950842 TCATTAAGATGTCCACAGAGTTCAT 58.049 36.000 0.00 0.00 34.77 2.57
7210 9637 5.186021 AGACATGACTGTACCAAACCTCTAG 59.814 44.000 0.00 0.00 35.14 2.43
7252 9679 1.734465 GTGCCAAGAGGAAGACAATCG 59.266 52.381 0.00 0.00 36.89 3.34
7512 9940 4.704540 TCTTTCCTTTGTCAACTTCAGCAA 59.295 37.500 0.00 0.00 0.00 3.91
7549 9977 7.499232 AGAAGAAGAAGAAAAGACAAATTCCGA 59.501 33.333 0.00 0.00 0.00 4.55
7644 10074 4.739195 TGTTCCTAAAATACAAATGGCGC 58.261 39.130 0.00 0.00 0.00 6.53
7743 10173 1.329906 GCTGAGATGCTCATTTGGACG 59.670 52.381 0.00 0.00 39.92 4.79
7809 10241 3.953612 TGCCATCTGTTTTGTCTCACTTT 59.046 39.130 0.00 0.00 0.00 2.66
8151 10583 7.279981 TGAACAAATGATAAGACTATTCCACCG 59.720 37.037 0.00 0.00 0.00 4.94
8379 10811 2.417787 GCTTCCATAAAAAGCAGCAGGG 60.418 50.000 0.00 0.00 46.63 4.45
8407 10839 1.899534 GTCCGATAGAGGCCGCTCT 60.900 63.158 14.14 2.12 37.48 4.09
8413 10845 0.530870 GGCACTTGTCCGATAGAGGC 60.531 60.000 0.00 0.00 39.76 4.70
8911 11343 8.989980 AGCACTCTGTTATAGTTCAAACTTAAC 58.010 33.333 0.00 9.72 40.37 2.01
8936 11368 8.761575 AAAACAAATTTCAGTATGGCATACAG 57.238 30.769 32.68 26.66 38.21 2.74
8996 11428 7.088272 GTCATGGTTTTGGGTAAATAACTCAC 58.912 38.462 0.00 0.00 38.70 3.51
9000 11432 6.988522 AGTGTCATGGTTTTGGGTAAATAAC 58.011 36.000 0.00 0.00 0.00 1.89
9001 11433 7.604657 AAGTGTCATGGTTTTGGGTAAATAA 57.395 32.000 0.00 0.00 0.00 1.40
9002 11434 8.707796 TTAAGTGTCATGGTTTTGGGTAAATA 57.292 30.769 0.00 0.00 0.00 1.40
9003 11435 7.256154 CCTTAAGTGTCATGGTTTTGGGTAAAT 60.256 37.037 0.97 0.00 0.00 1.40
9004 11436 6.041069 CCTTAAGTGTCATGGTTTTGGGTAAA 59.959 38.462 0.97 0.00 0.00 2.01
9005 11437 5.536916 CCTTAAGTGTCATGGTTTTGGGTAA 59.463 40.000 0.97 0.00 0.00 2.85
9006 11438 5.074115 CCTTAAGTGTCATGGTTTTGGGTA 58.926 41.667 0.97 0.00 0.00 3.69
9007 11439 3.895041 CCTTAAGTGTCATGGTTTTGGGT 59.105 43.478 0.97 0.00 0.00 4.51
9008 11440 3.306019 GCCTTAAGTGTCATGGTTTTGGG 60.306 47.826 0.97 0.00 0.00 4.12
9009 11441 3.573967 AGCCTTAAGTGTCATGGTTTTGG 59.426 43.478 0.97 0.00 0.00 3.28
9010 11442 4.853924 AGCCTTAAGTGTCATGGTTTTG 57.146 40.909 0.97 0.00 0.00 2.44
9011 11443 5.010282 CCTAGCCTTAAGTGTCATGGTTTT 58.990 41.667 0.97 0.00 0.00 2.43
9012 11444 4.567747 CCCTAGCCTTAAGTGTCATGGTTT 60.568 45.833 0.97 0.00 0.00 3.27
9013 11445 3.054361 CCCTAGCCTTAAGTGTCATGGTT 60.054 47.826 0.97 0.00 0.00 3.67
9014 11446 2.505819 CCCTAGCCTTAAGTGTCATGGT 59.494 50.000 0.97 0.00 0.00 3.55
9015 11447 2.505819 ACCCTAGCCTTAAGTGTCATGG 59.494 50.000 0.97 0.00 0.00 3.66
9016 11448 3.914426 ACCCTAGCCTTAAGTGTCATG 57.086 47.619 0.97 0.00 0.00 3.07
9017 11449 4.781087 TGTTACCCTAGCCTTAAGTGTCAT 59.219 41.667 0.97 0.00 0.00 3.06
9018 11450 4.161876 TGTTACCCTAGCCTTAAGTGTCA 58.838 43.478 0.97 0.00 0.00 3.58
9019 11451 4.813750 TGTTACCCTAGCCTTAAGTGTC 57.186 45.455 0.97 0.00 0.00 3.67
9020 11452 4.596212 AGTTGTTACCCTAGCCTTAAGTGT 59.404 41.667 0.97 0.00 0.00 3.55
9021 11453 5.161943 AGTTGTTACCCTAGCCTTAAGTG 57.838 43.478 0.97 0.00 0.00 3.16
9022 11454 5.514310 CCAAGTTGTTACCCTAGCCTTAAGT 60.514 44.000 1.45 0.00 0.00 2.24
9023 11455 4.941873 CCAAGTTGTTACCCTAGCCTTAAG 59.058 45.833 1.45 0.00 0.00 1.85
9024 11456 4.351704 ACCAAGTTGTTACCCTAGCCTTAA 59.648 41.667 1.45 0.00 0.00 1.85
9025 11457 3.911894 ACCAAGTTGTTACCCTAGCCTTA 59.088 43.478 1.45 0.00 0.00 2.69
9026 11458 2.714793 ACCAAGTTGTTACCCTAGCCTT 59.285 45.455 1.45 0.00 0.00 4.35
9027 11459 2.345560 ACCAAGTTGTTACCCTAGCCT 58.654 47.619 1.45 0.00 0.00 4.58
9028 11460 2.873094 ACCAAGTTGTTACCCTAGCC 57.127 50.000 1.45 0.00 0.00 3.93
9029 11461 5.093849 TGATACCAAGTTGTTACCCTAGC 57.906 43.478 1.45 0.00 0.00 3.42
9030 11462 6.540438 TCTGATACCAAGTTGTTACCCTAG 57.460 41.667 1.45 0.00 0.00 3.02
9031 11463 7.504926 AATCTGATACCAAGTTGTTACCCTA 57.495 36.000 1.45 0.00 0.00 3.53
9032 11464 6.388619 AATCTGATACCAAGTTGTTACCCT 57.611 37.500 1.45 0.00 0.00 4.34
9033 11465 9.490379 CTATAATCTGATACCAAGTTGTTACCC 57.510 37.037 1.45 0.00 0.00 3.69
9036 11468 9.961265 CGACTATAATCTGATACCAAGTTGTTA 57.039 33.333 1.45 0.00 0.00 2.41
9037 11469 7.926555 CCGACTATAATCTGATACCAAGTTGTT 59.073 37.037 1.45 0.00 0.00 2.83
9038 11470 7.434492 CCGACTATAATCTGATACCAAGTTGT 58.566 38.462 1.45 0.00 0.00 3.32
9039 11471 6.868864 CCCGACTATAATCTGATACCAAGTTG 59.131 42.308 0.00 0.00 0.00 3.16
9040 11472 6.014499 CCCCGACTATAATCTGATACCAAGTT 60.014 42.308 0.00 0.00 0.00 2.66
9041 11473 5.480772 CCCCGACTATAATCTGATACCAAGT 59.519 44.000 0.00 0.00 0.00 3.16
9042 11474 5.624738 GCCCCGACTATAATCTGATACCAAG 60.625 48.000 0.00 0.00 0.00 3.61
9043 11475 4.222145 GCCCCGACTATAATCTGATACCAA 59.778 45.833 0.00 0.00 0.00 3.67
9044 11476 3.767673 GCCCCGACTATAATCTGATACCA 59.232 47.826 0.00 0.00 0.00 3.25
9045 11477 3.767673 TGCCCCGACTATAATCTGATACC 59.232 47.826 0.00 0.00 0.00 2.73
9046 11478 4.219944 TGTGCCCCGACTATAATCTGATAC 59.780 45.833 0.00 0.00 0.00 2.24
9047 11479 4.412843 TGTGCCCCGACTATAATCTGATA 58.587 43.478 0.00 0.00 0.00 2.15
9048 11480 3.239449 TGTGCCCCGACTATAATCTGAT 58.761 45.455 0.00 0.00 0.00 2.90
9049 11481 2.673258 TGTGCCCCGACTATAATCTGA 58.327 47.619 0.00 0.00 0.00 3.27
9050 11482 3.469008 TTGTGCCCCGACTATAATCTG 57.531 47.619 0.00 0.00 0.00 2.90
9051 11483 4.497291 TTTTGTGCCCCGACTATAATCT 57.503 40.909 0.00 0.00 0.00 2.40
9077 11509 3.511146 CCCTTTACATGCACAATTCCTGT 59.489 43.478 0.00 0.00 39.56 4.00
9078 11510 3.119029 CCCCTTTACATGCACAATTCCTG 60.119 47.826 0.00 0.00 0.00 3.86
9079 11511 3.099141 CCCCTTTACATGCACAATTCCT 58.901 45.455 0.00 0.00 0.00 3.36
9080 11512 3.096092 TCCCCTTTACATGCACAATTCC 58.904 45.455 0.00 0.00 0.00 3.01
9081 11513 3.763897 ACTCCCCTTTACATGCACAATTC 59.236 43.478 0.00 0.00 0.00 2.17
9082 11514 3.778265 ACTCCCCTTTACATGCACAATT 58.222 40.909 0.00 0.00 0.00 2.32
9083 11515 3.456380 ACTCCCCTTTACATGCACAAT 57.544 42.857 0.00 0.00 0.00 2.71
9084 11516 2.969821 ACTCCCCTTTACATGCACAA 57.030 45.000 0.00 0.00 0.00 3.33
9085 11517 2.910319 AGTACTCCCCTTTACATGCACA 59.090 45.455 0.00 0.00 0.00 4.57
9086 11518 3.055385 TCAGTACTCCCCTTTACATGCAC 60.055 47.826 0.00 0.00 0.00 4.57
9087 11519 3.178046 TCAGTACTCCCCTTTACATGCA 58.822 45.455 0.00 0.00 0.00 3.96
9088 11520 3.906720 TCAGTACTCCCCTTTACATGC 57.093 47.619 0.00 0.00 0.00 4.06
9089 11521 5.745227 ACAATCAGTACTCCCCTTTACATG 58.255 41.667 0.00 0.00 0.00 3.21
9090 11522 6.388619 AACAATCAGTACTCCCCTTTACAT 57.611 37.500 0.00 0.00 0.00 2.29
9091 11523 5.836024 AACAATCAGTACTCCCCTTTACA 57.164 39.130 0.00 0.00 0.00 2.41
9092 11524 6.235664 TCAAACAATCAGTACTCCCCTTTAC 58.764 40.000 0.00 0.00 0.00 2.01
9093 11525 6.442541 TCAAACAATCAGTACTCCCCTTTA 57.557 37.500 0.00 0.00 0.00 1.85
9094 11526 5.319043 TCAAACAATCAGTACTCCCCTTT 57.681 39.130 0.00 0.00 0.00 3.11
9095 11527 4.993705 TCAAACAATCAGTACTCCCCTT 57.006 40.909 0.00 0.00 0.00 3.95
9096 11528 6.636454 TTATCAAACAATCAGTACTCCCCT 57.364 37.500 0.00 0.00 0.00 4.79
9097 11529 5.297029 GCTTATCAAACAATCAGTACTCCCC 59.703 44.000 0.00 0.00 0.00 4.81
9098 11530 6.116126 AGCTTATCAAACAATCAGTACTCCC 58.884 40.000 0.00 0.00 0.00 4.30
9099 11531 6.818644 TGAGCTTATCAAACAATCAGTACTCC 59.181 38.462 0.00 0.00 34.02 3.85
9100 11532 7.834068 TGAGCTTATCAAACAATCAGTACTC 57.166 36.000 0.00 0.00 34.02 2.59
9101 11533 7.201679 GCATGAGCTTATCAAACAATCAGTACT 60.202 37.037 0.00 0.00 42.53 2.73
9102 11534 6.909357 GCATGAGCTTATCAAACAATCAGTAC 59.091 38.462 0.00 0.00 42.53 2.73
9103 11535 6.598850 TGCATGAGCTTATCAAACAATCAGTA 59.401 34.615 0.00 0.00 42.53 2.74
9104 11536 5.416639 TGCATGAGCTTATCAAACAATCAGT 59.583 36.000 0.00 0.00 42.53 3.41
9105 11537 5.886992 TGCATGAGCTTATCAAACAATCAG 58.113 37.500 0.00 0.00 42.53 2.90
9106 11538 5.900865 TGCATGAGCTTATCAAACAATCA 57.099 34.783 0.00 0.00 42.53 2.57
9107 11539 6.986118 GTTTGCATGAGCTTATCAAACAATC 58.014 36.000 24.73 10.65 43.32 2.67
9108 11540 6.956299 GTTTGCATGAGCTTATCAAACAAT 57.044 33.333 24.73 0.00 43.32 2.71
9111 11543 5.344128 CACTGTTTGCATGAGCTTATCAAAC 59.656 40.000 23.86 23.86 42.53 2.93
9112 11544 5.241285 TCACTGTTTGCATGAGCTTATCAAA 59.759 36.000 0.00 10.11 42.53 2.69
9113 11545 4.761227 TCACTGTTTGCATGAGCTTATCAA 59.239 37.500 0.00 0.00 42.53 2.57
9114 11546 4.325972 TCACTGTTTGCATGAGCTTATCA 58.674 39.130 0.00 0.00 43.70 2.15
9115 11547 4.952262 TCACTGTTTGCATGAGCTTATC 57.048 40.909 0.00 0.00 42.74 1.75
9116 11548 5.242393 AGTTTCACTGTTTGCATGAGCTTAT 59.758 36.000 0.00 0.00 42.74 1.73
9117 11549 4.580167 AGTTTCACTGTTTGCATGAGCTTA 59.420 37.500 0.00 0.00 42.74 3.09
9118 11550 3.382546 AGTTTCACTGTTTGCATGAGCTT 59.617 39.130 0.00 0.00 42.74 3.74
9119 11551 2.954318 AGTTTCACTGTTTGCATGAGCT 59.046 40.909 0.00 0.00 42.74 4.09
9120 11552 3.047796 CAGTTTCACTGTTTGCATGAGC 58.952 45.455 0.00 0.00 41.19 4.26
9121 11553 4.556942 TCAGTTTCACTGTTTGCATGAG 57.443 40.909 0.00 0.00 46.03 2.90
9122 11554 6.486320 TCTTATCAGTTTCACTGTTTGCATGA 59.514 34.615 0.00 0.00 46.03 3.07
9123 11555 6.671190 TCTTATCAGTTTCACTGTTTGCATG 58.329 36.000 3.87 0.00 46.03 4.06
9124 11556 6.882610 TCTTATCAGTTTCACTGTTTGCAT 57.117 33.333 3.87 0.00 46.03 3.96
9125 11557 6.486320 TCATCTTATCAGTTTCACTGTTTGCA 59.514 34.615 3.87 0.00 46.03 4.08
9126 11558 6.902341 TCATCTTATCAGTTTCACTGTTTGC 58.098 36.000 3.87 0.00 46.03 3.68
9127 11559 7.361542 CCCTCATCTTATCAGTTTCACTGTTTG 60.362 40.741 3.87 0.00 46.03 2.93
9128 11560 6.656693 CCCTCATCTTATCAGTTTCACTGTTT 59.343 38.462 3.87 0.00 46.03 2.83
9129 11561 6.176183 CCCTCATCTTATCAGTTTCACTGTT 58.824 40.000 3.87 0.00 46.03 3.16
9130 11562 5.249393 ACCCTCATCTTATCAGTTTCACTGT 59.751 40.000 3.87 0.00 46.03 3.55
9132 11564 5.104735 GGACCCTCATCTTATCAGTTTCACT 60.105 44.000 0.00 0.00 0.00 3.41
9133 11565 5.119694 GGACCCTCATCTTATCAGTTTCAC 58.880 45.833 0.00 0.00 0.00 3.18
9134 11566 4.164221 GGGACCCTCATCTTATCAGTTTCA 59.836 45.833 2.09 0.00 0.00 2.69
9135 11567 4.164221 TGGGACCCTCATCTTATCAGTTTC 59.836 45.833 13.00 0.00 0.00 2.78
9136 11568 4.080299 GTGGGACCCTCATCTTATCAGTTT 60.080 45.833 13.00 0.00 0.00 2.66
9137 11569 3.456277 GTGGGACCCTCATCTTATCAGTT 59.544 47.826 13.00 0.00 0.00 3.16
9138 11570 3.041946 GTGGGACCCTCATCTTATCAGT 58.958 50.000 13.00 0.00 0.00 3.41
9139 11571 3.312890 AGTGGGACCCTCATCTTATCAG 58.687 50.000 13.00 0.00 0.00 2.90
9140 11572 3.421394 AGTGGGACCCTCATCTTATCA 57.579 47.619 13.00 0.00 0.00 2.15
9141 11573 3.456277 ACAAGTGGGACCCTCATCTTATC 59.544 47.826 13.00 0.00 0.00 1.75
9142 11574 3.464828 ACAAGTGGGACCCTCATCTTAT 58.535 45.455 13.00 0.00 0.00 1.73
9143 11575 2.915869 ACAAGTGGGACCCTCATCTTA 58.084 47.619 13.00 0.00 0.00 2.10
9144 11576 1.747444 ACAAGTGGGACCCTCATCTT 58.253 50.000 13.00 8.33 0.00 2.40
9145 11577 2.642171 TACAAGTGGGACCCTCATCT 57.358 50.000 13.00 2.30 0.00 2.90
9146 11578 3.713826 TTTACAAGTGGGACCCTCATC 57.286 47.619 13.00 0.00 0.00 2.92
9147 11579 3.591527 TCATTTACAAGTGGGACCCTCAT 59.408 43.478 13.00 0.00 0.00 2.90
9148 11580 2.983192 TCATTTACAAGTGGGACCCTCA 59.017 45.455 13.00 0.00 0.00 3.86
9149 11581 3.009143 AGTCATTTACAAGTGGGACCCTC 59.991 47.826 13.00 8.50 0.00 4.30
9150 11582 2.986728 AGTCATTTACAAGTGGGACCCT 59.013 45.455 13.00 0.00 0.00 4.34
9151 11583 3.434940 AGTCATTTACAAGTGGGACCC 57.565 47.619 2.45 2.45 0.00 4.46
9152 11584 6.002082 ACTTAAGTCATTTACAAGTGGGACC 58.998 40.000 1.12 0.00 0.00 4.46
9153 11585 6.485648 ACACTTAAGTCATTTACAAGTGGGAC 59.514 38.462 4.77 0.00 42.35 4.46
9154 11586 6.597562 ACACTTAAGTCATTTACAAGTGGGA 58.402 36.000 4.77 0.00 42.35 4.37
9155 11587 6.877611 ACACTTAAGTCATTTACAAGTGGG 57.122 37.500 4.77 0.00 42.35 4.61
9178 11610 8.749354 GCCCAGGAGAAAAGAAATAAAGATAAA 58.251 33.333 0.00 0.00 0.00 1.40
9179 11611 7.342026 GGCCCAGGAGAAAAGAAATAAAGATAA 59.658 37.037 0.00 0.00 0.00 1.75
9180 11612 6.833933 GGCCCAGGAGAAAAGAAATAAAGATA 59.166 38.462 0.00 0.00 0.00 1.98
9181 11613 5.658634 GGCCCAGGAGAAAAGAAATAAAGAT 59.341 40.000 0.00 0.00 0.00 2.40
9182 11614 5.016831 GGCCCAGGAGAAAAGAAATAAAGA 58.983 41.667 0.00 0.00 0.00 2.52
9183 11615 5.019470 AGGCCCAGGAGAAAAGAAATAAAG 58.981 41.667 0.00 0.00 0.00 1.85
9184 11616 5.010708 AGGCCCAGGAGAAAAGAAATAAA 57.989 39.130 0.00 0.00 0.00 1.40
9185 11617 4.675063 AGGCCCAGGAGAAAAGAAATAA 57.325 40.909 0.00 0.00 0.00 1.40
9186 11618 4.675063 AAGGCCCAGGAGAAAAGAAATA 57.325 40.909 0.00 0.00 0.00 1.40
9187 11619 3.549898 AAGGCCCAGGAGAAAAGAAAT 57.450 42.857 0.00 0.00 0.00 2.17
9188 11620 3.230976 GAAAGGCCCAGGAGAAAAGAAA 58.769 45.455 0.00 0.00 0.00 2.52
9189 11621 2.176798 TGAAAGGCCCAGGAGAAAAGAA 59.823 45.455 0.00 0.00 0.00 2.52
9190 11622 1.780309 TGAAAGGCCCAGGAGAAAAGA 59.220 47.619 0.00 0.00 0.00 2.52
9191 11623 2.292828 TGAAAGGCCCAGGAGAAAAG 57.707 50.000 0.00 0.00 0.00 2.27
9192 11624 2.316108 GTTGAAAGGCCCAGGAGAAAA 58.684 47.619 0.00 0.00 0.00 2.29
9193 11625 1.216678 TGTTGAAAGGCCCAGGAGAAA 59.783 47.619 0.00 0.00 0.00 2.52
9194 11626 0.850100 TGTTGAAAGGCCCAGGAGAA 59.150 50.000 0.00 0.00 0.00 2.87
9195 11627 0.850100 TTGTTGAAAGGCCCAGGAGA 59.150 50.000 0.00 0.00 0.00 3.71
9196 11628 1.341209 GTTTGTTGAAAGGCCCAGGAG 59.659 52.381 0.00 0.00 0.00 3.69
9197 11629 1.342474 TGTTTGTTGAAAGGCCCAGGA 60.342 47.619 0.00 0.00 0.00 3.86
9198 11630 1.118838 TGTTTGTTGAAAGGCCCAGG 58.881 50.000 0.00 0.00 0.00 4.45
9199 11631 1.535860 CGTGTTTGTTGAAAGGCCCAG 60.536 52.381 0.00 0.00 0.00 4.45
9200 11632 0.457851 CGTGTTTGTTGAAAGGCCCA 59.542 50.000 0.00 0.00 0.00 5.36
9201 11633 0.458260 ACGTGTTTGTTGAAAGGCCC 59.542 50.000 0.00 0.00 0.00 5.80
9202 11634 3.636282 ATACGTGTTTGTTGAAAGGCC 57.364 42.857 0.00 0.00 0.00 5.19
9203 11635 3.733727 CCAATACGTGTTTGTTGAAAGGC 59.266 43.478 0.00 0.00 0.00 4.35
9204 11636 4.295051 CCCAATACGTGTTTGTTGAAAGG 58.705 43.478 0.00 0.00 0.00 3.11
9205 11637 3.733727 GCCCAATACGTGTTTGTTGAAAG 59.266 43.478 0.00 0.00 0.00 2.62
9206 11638 3.707793 GCCCAATACGTGTTTGTTGAAA 58.292 40.909 0.00 0.00 0.00 2.69
9207 11639 2.287069 CGCCCAATACGTGTTTGTTGAA 60.287 45.455 0.00 0.00 0.00 2.69
9208 11640 1.264557 CGCCCAATACGTGTTTGTTGA 59.735 47.619 0.00 0.00 0.00 3.18
9209 11641 1.264557 TCGCCCAATACGTGTTTGTTG 59.735 47.619 0.00 0.00 0.00 3.33
9210 11642 1.264826 GTCGCCCAATACGTGTTTGTT 59.735 47.619 0.00 0.00 0.00 2.83
9211 11643 0.869730 GTCGCCCAATACGTGTTTGT 59.130 50.000 0.00 0.00 0.00 2.83
9212 11644 0.869068 TGTCGCCCAATACGTGTTTG 59.131 50.000 0.00 1.89 0.00 2.93
9213 11645 1.735571 GATGTCGCCCAATACGTGTTT 59.264 47.619 0.00 0.00 0.00 2.83
9214 11646 1.066430 AGATGTCGCCCAATACGTGTT 60.066 47.619 0.00 0.00 0.00 3.32
9215 11647 0.535335 AGATGTCGCCCAATACGTGT 59.465 50.000 0.00 0.00 0.00 4.49
9216 11648 2.502213 TAGATGTCGCCCAATACGTG 57.498 50.000 0.00 0.00 0.00 4.49
9217 11649 2.866460 GCATAGATGTCGCCCAATACGT 60.866 50.000 0.00 0.00 0.00 3.57
9218 11650 1.726791 GCATAGATGTCGCCCAATACG 59.273 52.381 0.00 0.00 0.00 3.06
9219 11651 2.766313 TGCATAGATGTCGCCCAATAC 58.234 47.619 0.00 0.00 0.00 1.89
9220 11652 3.701205 ATGCATAGATGTCGCCCAATA 57.299 42.857 0.00 0.00 0.00 1.90
9221 11653 2.574006 ATGCATAGATGTCGCCCAAT 57.426 45.000 0.00 0.00 0.00 3.16
9222 11654 3.244526 ACATATGCATAGATGTCGCCCAA 60.245 43.478 12.79 0.00 33.69 4.12
9223 11655 2.302733 ACATATGCATAGATGTCGCCCA 59.697 45.455 12.79 0.00 33.69 5.36
9224 11656 2.674852 CACATATGCATAGATGTCGCCC 59.325 50.000 12.79 0.00 36.65 6.13
9266 11698 2.512515 CCACTAAGGGCAGCGAGC 60.513 66.667 0.00 0.00 44.65 5.03
9267 11699 2.982130 ACCACTAAGGGCAGCGAG 59.018 61.111 0.00 0.00 43.89 5.03
9273 11705 2.183555 CCGTCGACCACTAAGGGC 59.816 66.667 10.58 0.00 44.64 5.19
9274 11706 1.246056 TGACCGTCGACCACTAAGGG 61.246 60.000 10.58 5.90 43.89 3.95
9275 11707 0.815734 ATGACCGTCGACCACTAAGG 59.184 55.000 10.58 6.67 45.67 2.69
9276 11708 2.527100 GAATGACCGTCGACCACTAAG 58.473 52.381 10.58 0.00 0.00 2.18
9277 11709 1.135603 CGAATGACCGTCGACCACTAA 60.136 52.381 10.58 0.00 41.02 2.24
9278 11710 0.448990 CGAATGACCGTCGACCACTA 59.551 55.000 10.58 0.00 41.02 2.74
9279 11711 1.211969 CGAATGACCGTCGACCACT 59.788 57.895 10.58 0.00 41.02 4.00
9280 11712 0.797249 CTCGAATGACCGTCGACCAC 60.797 60.000 10.58 2.17 42.31 4.16
9281 11713 0.956902 TCTCGAATGACCGTCGACCA 60.957 55.000 10.58 2.35 42.31 4.02
9282 11714 0.522915 GTCTCGAATGACCGTCGACC 60.523 60.000 10.58 0.00 42.31 4.79
9283 11715 0.522915 GGTCTCGAATGACCGTCGAC 60.523 60.000 5.18 5.18 45.69 4.20
9284 11716 1.798735 GGTCTCGAATGACCGTCGA 59.201 57.895 7.98 0.00 45.69 4.20
9285 11717 4.379221 GGTCTCGAATGACCGTCG 57.621 61.111 7.98 0.00 45.69 5.12
9290 11722 1.078759 CACGGCAGGTCTCGAATGAC 61.079 60.000 0.00 0.00 36.31 3.06
9291 11723 1.215382 CACGGCAGGTCTCGAATGA 59.785 57.895 0.00 0.00 0.00 2.57
9292 11724 2.456119 GCACGGCAGGTCTCGAATG 61.456 63.158 0.00 0.00 0.00 2.67
9293 11725 2.125512 GCACGGCAGGTCTCGAAT 60.126 61.111 0.00 0.00 0.00 3.34
9294 11726 4.373116 GGCACGGCAGGTCTCGAA 62.373 66.667 0.00 0.00 0.00 3.71
9306 11738 4.980903 GTTGCAAGCACGGGCACG 62.981 66.667 14.57 6.92 44.61 5.34
9307 11739 4.980903 CGTTGCAAGCACGGGCAC 62.981 66.667 14.57 0.00 44.61 5.01
9410 11842 1.215647 CCCCTGTCAGTACGAGCAC 59.784 63.158 0.00 0.00 0.00 4.40
9411 11843 1.228769 ACCCCTGTCAGTACGAGCA 60.229 57.895 0.00 0.00 0.00 4.26
9501 11933 4.120331 GCCATGGCGCTCCACAAC 62.120 66.667 23.48 0.00 46.92 3.32
9611 12043 4.770362 TCATGGGGAGCGACGGGA 62.770 66.667 0.00 0.00 0.00 5.14
9612 12044 4.227134 CTCATGGGGAGCGACGGG 62.227 72.222 0.00 0.00 36.69 5.28
9619 12051 1.773391 ATCAGGGGCTCATGGGGAG 60.773 63.158 0.00 0.00 46.93 4.30
9620 12052 2.080536 CATCAGGGGCTCATGGGGA 61.081 63.158 0.00 0.00 0.00 4.81
9621 12053 2.519441 CATCAGGGGCTCATGGGG 59.481 66.667 0.00 0.00 0.00 4.96
9622 12054 2.203451 GCATCAGGGGCTCATGGG 60.203 66.667 0.00 0.00 0.00 4.00
9623 12055 2.203451 GGCATCAGGGGCTCATGG 60.203 66.667 0.00 0.00 0.00 3.66
9624 12056 1.826921 GTGGCATCAGGGGCTCATG 60.827 63.158 0.00 0.00 0.00 3.07
9625 12057 2.599597 GTGGCATCAGGGGCTCAT 59.400 61.111 0.00 0.00 0.00 2.90
9626 12058 3.731728 GGTGGCATCAGGGGCTCA 61.732 66.667 0.00 0.00 0.00 4.26
9627 12059 3.412624 GAGGTGGCATCAGGGGCTC 62.413 68.421 0.00 0.00 0.00 4.70
9628 12060 3.415087 GAGGTGGCATCAGGGGCT 61.415 66.667 0.00 0.00 0.00 5.19
9715 12194 3.417275 CTACTCGTGCTCGGCAGGG 62.417 68.421 8.49 10.25 43.44 4.45
9716 12195 2.103143 CTACTCGTGCTCGGCAGG 59.897 66.667 8.49 10.95 44.42 4.85
9717 12196 2.580867 GCTACTCGTGCTCGGCAG 60.581 66.667 8.49 1.84 40.08 4.85
9718 12197 4.129737 GGCTACTCGTGCTCGGCA 62.130 66.667 8.49 0.00 37.69 5.69
9719 12198 4.129737 TGGCTACTCGTGCTCGGC 62.130 66.667 8.49 3.53 37.69 5.54
9720 12199 2.103143 CTGGCTACTCGTGCTCGG 59.897 66.667 8.49 1.90 37.69 4.63
9721 12200 1.063327 CTCTGGCTACTCGTGCTCG 59.937 63.158 0.81 0.81 38.55 5.03
9722 12201 1.226831 GCTCTGGCTACTCGTGCTC 60.227 63.158 0.00 0.00 35.22 4.26
9723 12202 2.716017 GGCTCTGGCTACTCGTGCT 61.716 63.158 0.00 0.00 38.73 4.40
9724 12203 2.202810 GGCTCTGGCTACTCGTGC 60.203 66.667 0.00 0.00 38.73 5.34
9731 12210 1.685224 CCAAAGTGGGCTCTGGCTA 59.315 57.895 0.00 0.00 38.73 3.93
9748 12227 1.559682 TCTTCTATGGTTGTGGAGGCC 59.440 52.381 0.00 0.00 0.00 5.19
9752 12231 2.614481 GGCGTTCTTCTATGGTTGTGGA 60.614 50.000 0.00 0.00 0.00 4.02
9784 12263 0.741221 GCGGCAGTGAGAAACTAGGG 60.741 60.000 0.00 0.00 36.83 3.53
9787 12266 1.080093 CCGCGGCAGTGAGAAACTA 60.080 57.895 14.67 0.00 36.83 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.