Multiple sequence alignment - TraesCS7D01G282500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G282500 chr7D 100.000 4132 0 0 1 4132 288459023 288463154 0.000000e+00 7631
1 TraesCS7D01G282500 chr7D 93.296 537 34 2 292 826 561873936 561873400 0.000000e+00 791
2 TraesCS7D01G282500 chr7B 93.840 1737 61 16 1923 3619 363288021 363286291 0.000000e+00 2573
3 TraesCS7D01G282500 chr7B 97.120 1111 13 3 830 1922 363289169 363288060 0.000000e+00 1857
4 TraesCS7D01G282500 chr7B 91.626 203 8 3 3938 4132 363286114 363285913 5.260000e-69 272
5 TraesCS7D01G282500 chr7B 88.043 92 9 1 3854 3943 363286223 363286132 1.570000e-19 108
6 TraesCS7D01G282500 chr7A 95.755 1437 34 15 2110 3521 324925195 324926629 0.000000e+00 2290
7 TraesCS7D01G282500 chr7A 95.000 1320 29 14 824 2108 324923713 324925030 0.000000e+00 2037
8 TraesCS7D01G282500 chr7A 89.199 287 20 4 3856 4132 324936531 324936816 8.500000e-92 348
9 TraesCS7D01G282500 chr7A 92.727 110 6 2 3516 3624 324936416 324936524 1.540000e-34 158
10 TraesCS7D01G282500 chr5D 94.382 534 27 3 293 823 272355911 272356444 0.000000e+00 817
11 TraesCS7D01G282500 chr5D 96.194 289 11 0 3 291 180034093 180034381 1.340000e-129 473
12 TraesCS7D01G282500 chr5D 95.876 291 12 0 3 293 299866394 299866684 4.830000e-129 472
13 TraesCS7D01G282500 chr5D 95.563 293 12 1 3 295 512593163 512593454 6.250000e-128 468
14 TraesCS7D01G282500 chr4D 94.206 535 26 5 292 823 468586124 468586656 0.000000e+00 811
15 TraesCS7D01G282500 chr4D 93.433 533 31 4 292 822 5724717 5724187 0.000000e+00 787
16 TraesCS7D01G282500 chr4D 93.220 531 34 2 293 822 385586568 385587097 0.000000e+00 780
17 TraesCS7D01G282500 chr1D 94.195 534 28 3 293 824 452692639 452692107 0.000000e+00 811
18 TraesCS7D01G282500 chr1D 93.409 531 29 4 293 822 39873595 39873070 0.000000e+00 782
19 TraesCS7D01G282500 chr1D 96.194 289 11 0 3 291 388504641 388504929 1.340000e-129 473
20 TraesCS7D01G282500 chr6D 93.855 537 30 3 293 826 17972777 17972241 0.000000e+00 806
21 TraesCS7D01G282500 chr5B 93.585 530 32 2 292 819 12641965 12641436 0.000000e+00 789
22 TraesCS7D01G282500 chr3D 96.194 289 11 0 3 291 215768629 215768917 1.340000e-129 473
23 TraesCS7D01G282500 chr2D 96.194 289 11 0 3 291 228711600 228711312 1.340000e-129 473
24 TraesCS7D01G282500 chr2D 95.608 296 11 2 3 296 233119365 233119070 1.340000e-129 473
25 TraesCS7D01G282500 chr2D 95.862 290 12 0 3 292 261440156 261440445 1.740000e-128 470
26 TraesCS7D01G282500 chr5A 95.548 292 13 0 3 294 174167030 174167321 6.250000e-128 468


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G282500 chr7D 288459023 288463154 4131 False 7631.0 7631 100.00000 1 4132 1 chr7D.!!$F1 4131
1 TraesCS7D01G282500 chr7D 561873400 561873936 536 True 791.0 791 93.29600 292 826 1 chr7D.!!$R1 534
2 TraesCS7D01G282500 chr7B 363285913 363289169 3256 True 1202.5 2573 92.65725 830 4132 4 chr7B.!!$R1 3302
3 TraesCS7D01G282500 chr7A 324923713 324926629 2916 False 2163.5 2290 95.37750 824 3521 2 chr7A.!!$F1 2697
4 TraesCS7D01G282500 chr5D 272355911 272356444 533 False 817.0 817 94.38200 293 823 1 chr5D.!!$F2 530
5 TraesCS7D01G282500 chr4D 468586124 468586656 532 False 811.0 811 94.20600 292 823 1 chr4D.!!$F2 531
6 TraesCS7D01G282500 chr4D 5724187 5724717 530 True 787.0 787 93.43300 292 822 1 chr4D.!!$R1 530
7 TraesCS7D01G282500 chr4D 385586568 385587097 529 False 780.0 780 93.22000 293 822 1 chr4D.!!$F1 529
8 TraesCS7D01G282500 chr1D 452692107 452692639 532 True 811.0 811 94.19500 293 824 1 chr1D.!!$R2 531
9 TraesCS7D01G282500 chr1D 39873070 39873595 525 True 782.0 782 93.40900 293 822 1 chr1D.!!$R1 529
10 TraesCS7D01G282500 chr6D 17972241 17972777 536 True 806.0 806 93.85500 293 826 1 chr6D.!!$R1 533
11 TraesCS7D01G282500 chr5B 12641436 12641965 529 True 789.0 789 93.58500 292 819 1 chr5B.!!$R1 527

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
127 128 0.025513 CGAAGATTTCCGCTGCGAAG 59.974 55.0 25.45 7.89 36.51 3.79 F
262 263 0.032267 TGTACACGTGCATTCGGTGA 59.968 50.0 17.22 0.00 34.94 4.02 F
265 266 0.320334 ACACGTGCATTCGGTGATCA 60.320 50.0 17.22 0.00 34.94 2.92 F
288 289 0.689745 CTTATGAGTCGGGGTCCCCA 60.690 60.0 27.45 11.28 45.83 4.96 F
289 290 0.979187 TTATGAGTCGGGGTCCCCAC 60.979 60.0 27.45 21.74 45.83 4.61 F
1749 1791 1.680338 AGGGTTTCACACAGAGCAAC 58.320 50.0 0.00 0.00 0.00 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1749 1791 1.068753 ATCCTTGCTGATCCTCGCG 59.931 57.895 0.00 0.00 0.00 5.87 R
2067 2147 1.993370 CTTACCAGCACGTCTAACTGC 59.007 52.381 0.00 0.00 0.00 4.40 R
2097 2177 3.885484 ATGCTTATTCGAATTCGCAGG 57.115 42.857 26.86 11.45 39.60 4.85 R
2220 2464 4.506271 CCCAAATGCCATACTAGAGATGCT 60.506 45.833 0.00 0.00 0.00 3.79 R
2242 2486 9.399797 TGATCATATGCTGAATTATATCAACCC 57.600 33.333 0.00 0.00 37.44 4.11 R
3664 3953 0.310543 TGCTGGTTCAAATGACACGC 59.689 50.000 0.00 0.00 0.00 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 9.778741 TGATATAATGAAGAATACCTTGGTGAC 57.221 33.333 2.03 0.00 34.68 3.67
32 33 8.833231 ATATAATGAAGAATACCTTGGTGACG 57.167 34.615 2.03 0.00 34.68 4.35
33 34 4.819105 ATGAAGAATACCTTGGTGACGA 57.181 40.909 2.03 0.00 34.68 4.20
34 35 4.610605 TGAAGAATACCTTGGTGACGAA 57.389 40.909 2.03 0.00 34.68 3.85
35 36 4.312443 TGAAGAATACCTTGGTGACGAAC 58.688 43.478 2.03 0.00 34.68 3.95
36 37 2.955614 AGAATACCTTGGTGACGAACG 58.044 47.619 2.03 0.00 0.00 3.95
37 38 2.298163 AGAATACCTTGGTGACGAACGT 59.702 45.455 2.03 0.00 0.00 3.99
38 39 2.074547 ATACCTTGGTGACGAACGTG 57.925 50.000 4.19 0.00 0.00 4.49
39 40 0.598158 TACCTTGGTGACGAACGTGC 60.598 55.000 4.19 0.00 0.00 5.34
40 41 2.544359 CTTGGTGACGAACGTGCG 59.456 61.111 16.06 16.06 37.29 5.34
41 42 1.947146 CTTGGTGACGAACGTGCGA 60.947 57.895 25.68 0.00 34.83 5.10
42 43 1.876453 CTTGGTGACGAACGTGCGAG 61.876 60.000 25.68 4.00 34.83 5.03
43 44 3.764049 GGTGACGAACGTGCGAGC 61.764 66.667 25.68 14.63 34.83 5.03
44 45 2.729862 GTGACGAACGTGCGAGCT 60.730 61.111 25.68 0.00 34.83 4.09
45 46 1.441515 GTGACGAACGTGCGAGCTA 60.442 57.895 25.68 2.29 34.83 3.32
46 47 1.154282 TGACGAACGTGCGAGCTAG 60.154 57.895 25.68 0.00 34.83 3.42
47 48 1.868251 GACGAACGTGCGAGCTAGG 60.868 63.158 25.68 0.00 34.83 3.02
48 49 2.249557 GACGAACGTGCGAGCTAGGA 62.250 60.000 25.68 0.00 34.83 2.94
49 50 1.868251 CGAACGTGCGAGCTAGGAC 60.868 63.158 11.51 8.44 0.00 3.85
56 57 2.413765 CGAGCTAGGACGCTTCCC 59.586 66.667 5.45 0.00 44.10 3.97
57 58 2.415608 CGAGCTAGGACGCTTCCCA 61.416 63.158 5.45 0.00 44.10 4.37
58 59 1.439644 GAGCTAGGACGCTTCCCAG 59.560 63.158 5.45 2.58 44.10 4.45
59 60 1.305381 AGCTAGGACGCTTCCCAGT 60.305 57.895 5.45 0.00 44.10 4.00
60 61 1.142097 GCTAGGACGCTTCCCAGTC 59.858 63.158 5.45 0.00 44.10 3.51
61 62 1.605058 GCTAGGACGCTTCCCAGTCA 61.605 60.000 5.45 0.00 44.10 3.41
62 63 0.457851 CTAGGACGCTTCCCAGTCAG 59.542 60.000 5.45 0.00 44.10 3.51
63 64 0.039180 TAGGACGCTTCCCAGTCAGA 59.961 55.000 5.45 0.00 44.10 3.27
64 65 0.832135 AGGACGCTTCCCAGTCAGAA 60.832 55.000 5.45 0.00 44.10 3.02
65 66 0.250513 GGACGCTTCCCAGTCAGAAT 59.749 55.000 0.00 0.00 39.01 2.40
66 67 1.363744 GACGCTTCCCAGTCAGAATG 58.636 55.000 0.00 0.00 37.34 2.67
67 68 0.674895 ACGCTTCCCAGTCAGAATGC 60.675 55.000 0.00 0.00 34.76 3.56
68 69 1.372087 CGCTTCCCAGTCAGAATGCC 61.372 60.000 0.00 0.00 34.76 4.40
69 70 0.034670 GCTTCCCAGTCAGAATGCCT 60.035 55.000 0.00 0.00 34.76 4.75
70 71 1.747709 CTTCCCAGTCAGAATGCCTG 58.252 55.000 0.00 0.00 44.27 4.85
71 72 1.004044 CTTCCCAGTCAGAATGCCTGT 59.996 52.381 0.00 0.00 43.38 4.00
72 73 1.951209 TCCCAGTCAGAATGCCTGTA 58.049 50.000 0.00 0.00 43.38 2.74
73 74 1.833630 TCCCAGTCAGAATGCCTGTAG 59.166 52.381 0.00 0.00 43.38 2.74
74 75 1.134280 CCCAGTCAGAATGCCTGTAGG 60.134 57.143 0.00 0.00 43.38 3.18
75 76 1.134280 CCAGTCAGAATGCCTGTAGGG 60.134 57.143 0.00 0.00 43.38 3.53
76 77 1.556911 CAGTCAGAATGCCTGTAGGGT 59.443 52.381 0.00 0.00 43.38 4.34
77 78 2.026822 CAGTCAGAATGCCTGTAGGGTT 60.027 50.000 0.00 0.00 43.38 4.11
78 79 3.197766 CAGTCAGAATGCCTGTAGGGTTA 59.802 47.826 0.00 0.00 43.38 2.85
79 80 3.844211 AGTCAGAATGCCTGTAGGGTTAA 59.156 43.478 0.00 0.00 43.38 2.01
80 81 4.080863 AGTCAGAATGCCTGTAGGGTTAAG 60.081 45.833 0.00 0.00 43.38 1.85
81 82 3.199946 TCAGAATGCCTGTAGGGTTAAGG 59.800 47.826 0.00 0.00 43.38 2.69
87 88 3.199880 CCTGTAGGGTTAAGGCAGATG 57.800 52.381 0.00 0.00 0.00 2.90
88 89 2.158755 CCTGTAGGGTTAAGGCAGATGG 60.159 54.545 0.00 0.00 0.00 3.51
89 90 1.211949 TGTAGGGTTAAGGCAGATGGC 59.788 52.381 0.00 0.00 43.74 4.40
98 99 2.276409 GCAGATGGCATGGGTCCA 59.724 61.111 3.81 0.00 43.97 4.02
99 100 1.380246 GCAGATGGCATGGGTCCAA 60.380 57.895 3.81 0.00 43.97 3.53
100 101 0.971959 GCAGATGGCATGGGTCCAAA 60.972 55.000 3.81 0.00 43.97 3.28
101 102 1.784358 CAGATGGCATGGGTCCAAAT 58.216 50.000 3.81 0.00 37.13 2.32
102 103 2.112998 CAGATGGCATGGGTCCAAATT 58.887 47.619 3.81 0.00 37.13 1.82
103 104 3.298619 CAGATGGCATGGGTCCAAATTA 58.701 45.455 3.81 0.00 37.13 1.40
104 105 3.899360 CAGATGGCATGGGTCCAAATTAT 59.101 43.478 3.81 0.00 37.13 1.28
105 106 4.021719 CAGATGGCATGGGTCCAAATTATC 60.022 45.833 3.81 0.00 37.13 1.75
106 107 2.305928 TGGCATGGGTCCAAATTATCG 58.694 47.619 0.00 0.00 0.00 2.92
107 108 2.092158 TGGCATGGGTCCAAATTATCGA 60.092 45.455 0.00 0.00 0.00 3.59
108 109 2.293399 GGCATGGGTCCAAATTATCGAC 59.707 50.000 0.00 0.00 0.00 4.20
109 110 2.032030 GCATGGGTCCAAATTATCGACG 60.032 50.000 0.00 0.00 0.00 5.12
110 111 3.462982 CATGGGTCCAAATTATCGACGA 58.537 45.455 0.00 0.00 0.00 4.20
111 112 3.613494 TGGGTCCAAATTATCGACGAA 57.387 42.857 0.00 0.00 0.00 3.85
112 113 3.527533 TGGGTCCAAATTATCGACGAAG 58.472 45.455 0.00 0.00 0.00 3.79
113 114 3.196039 TGGGTCCAAATTATCGACGAAGA 59.804 43.478 0.00 0.00 0.00 2.87
114 115 4.141801 TGGGTCCAAATTATCGACGAAGAT 60.142 41.667 0.00 0.00 34.79 2.40
115 116 4.814771 GGGTCCAAATTATCGACGAAGATT 59.185 41.667 0.00 2.37 32.39 2.40
116 117 5.296035 GGGTCCAAATTATCGACGAAGATTT 59.704 40.000 0.00 8.64 32.39 2.17
117 118 6.419771 GGTCCAAATTATCGACGAAGATTTC 58.580 40.000 14.95 7.75 32.39 2.17
118 119 6.419771 GTCCAAATTATCGACGAAGATTTCC 58.580 40.000 14.95 6.60 32.39 3.13
119 120 5.233476 TCCAAATTATCGACGAAGATTTCCG 59.767 40.000 14.95 10.38 32.39 4.30
120 121 4.710528 AATTATCGACGAAGATTTCCGC 57.289 40.909 0.00 0.00 32.39 5.54
121 122 3.431922 TTATCGACGAAGATTTCCGCT 57.568 42.857 0.00 0.00 32.39 5.52
122 123 1.560923 ATCGACGAAGATTTCCGCTG 58.439 50.000 0.00 0.00 0.00 5.18
123 124 1.076533 TCGACGAAGATTTCCGCTGC 61.077 55.000 0.00 0.00 0.00 5.25
124 125 1.345176 GACGAAGATTTCCGCTGCG 59.655 57.895 16.34 16.34 40.27 5.18
125 126 1.076533 GACGAAGATTTCCGCTGCGA 61.077 55.000 25.45 3.54 36.51 5.10
126 127 0.669318 ACGAAGATTTCCGCTGCGAA 60.669 50.000 25.45 11.38 36.51 4.70
127 128 0.025513 CGAAGATTTCCGCTGCGAAG 59.974 55.000 25.45 7.89 36.51 3.79
128 129 1.079503 GAAGATTTCCGCTGCGAAGT 58.920 50.000 25.45 12.26 0.00 3.01
129 130 1.464997 GAAGATTTCCGCTGCGAAGTT 59.535 47.619 25.45 8.41 0.00 2.66
130 131 2.380084 AGATTTCCGCTGCGAAGTTA 57.620 45.000 25.45 4.21 0.00 2.24
131 132 2.906354 AGATTTCCGCTGCGAAGTTAT 58.094 42.857 25.45 9.03 0.00 1.89
132 133 4.054780 AGATTTCCGCTGCGAAGTTATA 57.945 40.909 25.45 1.60 0.00 0.98
133 134 3.802685 AGATTTCCGCTGCGAAGTTATAC 59.197 43.478 25.45 6.92 0.00 1.47
134 135 2.953466 TTCCGCTGCGAAGTTATACT 57.047 45.000 25.45 0.00 0.00 2.12
135 136 2.486951 TCCGCTGCGAAGTTATACTC 57.513 50.000 25.45 0.00 0.00 2.59
136 137 1.746787 TCCGCTGCGAAGTTATACTCA 59.253 47.619 25.45 0.00 0.00 3.41
137 138 2.164827 TCCGCTGCGAAGTTATACTCAA 59.835 45.455 25.45 0.00 0.00 3.02
138 139 2.927477 CCGCTGCGAAGTTATACTCAAA 59.073 45.455 25.45 0.00 0.00 2.69
139 140 3.369756 CCGCTGCGAAGTTATACTCAAAA 59.630 43.478 25.45 0.00 0.00 2.44
140 141 4.323751 CGCTGCGAAGTTATACTCAAAAC 58.676 43.478 18.66 0.00 0.00 2.43
141 142 4.091509 CGCTGCGAAGTTATACTCAAAACT 59.908 41.667 18.66 0.00 37.54 2.66
142 143 5.551893 GCTGCGAAGTTATACTCAAAACTC 58.448 41.667 0.00 0.00 34.91 3.01
143 144 5.721510 GCTGCGAAGTTATACTCAAAACTCG 60.722 44.000 0.00 0.00 34.91 4.18
144 145 5.463286 TGCGAAGTTATACTCAAAACTCGA 58.537 37.500 0.00 0.00 34.91 4.04
145 146 5.344128 TGCGAAGTTATACTCAAAACTCGAC 59.656 40.000 0.00 0.00 34.91 4.20
146 147 5.220172 GCGAAGTTATACTCAAAACTCGACC 60.220 44.000 0.00 0.00 34.91 4.79
147 148 5.860182 CGAAGTTATACTCAAAACTCGACCA 59.140 40.000 0.00 0.00 34.91 4.02
148 149 6.530534 CGAAGTTATACTCAAAACTCGACCAT 59.469 38.462 0.00 0.00 34.91 3.55
149 150 7.699391 CGAAGTTATACTCAAAACTCGACCATA 59.301 37.037 0.00 0.00 34.91 2.74
150 151 9.362539 GAAGTTATACTCAAAACTCGACCATAA 57.637 33.333 0.00 0.00 34.91 1.90
151 152 9.886132 AAGTTATACTCAAAACTCGACCATAAT 57.114 29.630 0.00 0.00 34.91 1.28
152 153 9.314321 AGTTATACTCAAAACTCGACCATAATG 57.686 33.333 0.00 0.00 30.08 1.90
153 154 8.548721 GTTATACTCAAAACTCGACCATAATGG 58.451 37.037 0.00 0.00 45.02 3.16
190 191 9.292195 TGTAAGACGATATGTATGGATGTAAGA 57.708 33.333 0.00 0.00 0.00 2.10
191 192 9.557338 GTAAGACGATATGTATGGATGTAAGAC 57.443 37.037 0.00 0.00 0.00 3.01
192 193 8.410673 AAGACGATATGTATGGATGTAAGACT 57.589 34.615 0.00 0.00 0.00 3.24
193 194 8.046294 AGACGATATGTATGGATGTAAGACTC 57.954 38.462 0.00 0.00 0.00 3.36
194 195 7.885922 AGACGATATGTATGGATGTAAGACTCT 59.114 37.037 0.00 0.00 0.00 3.24
195 196 8.410673 ACGATATGTATGGATGTAAGACTCTT 57.589 34.615 0.00 0.00 0.00 2.85
196 197 8.300286 ACGATATGTATGGATGTAAGACTCTTG 58.700 37.037 1.17 0.00 0.00 3.02
197 198 8.300286 CGATATGTATGGATGTAAGACTCTTGT 58.700 37.037 1.17 0.00 0.00 3.16
198 199 9.988815 GATATGTATGGATGTAAGACTCTTGTT 57.011 33.333 1.17 0.00 0.00 2.83
202 203 9.817809 TGTATGGATGTAAGACTCTTGTTATTC 57.182 33.333 1.17 0.00 0.00 1.75
203 204 9.817809 GTATGGATGTAAGACTCTTGTTATTCA 57.182 33.333 1.17 0.00 0.00 2.57
204 205 8.954950 ATGGATGTAAGACTCTTGTTATTCAG 57.045 34.615 1.17 0.00 0.00 3.02
205 206 6.818644 TGGATGTAAGACTCTTGTTATTCAGC 59.181 38.462 1.17 0.00 0.00 4.26
206 207 7.044798 GGATGTAAGACTCTTGTTATTCAGCT 58.955 38.462 1.17 0.00 0.00 4.24
207 208 7.550906 GGATGTAAGACTCTTGTTATTCAGCTT 59.449 37.037 1.17 0.00 0.00 3.74
208 209 9.587772 GATGTAAGACTCTTGTTATTCAGCTTA 57.412 33.333 1.17 0.00 0.00 3.09
210 211 9.371136 TGTAAGACTCTTGTTATTCAGCTTATG 57.629 33.333 1.17 0.00 0.00 1.90
211 212 9.372369 GTAAGACTCTTGTTATTCAGCTTATGT 57.628 33.333 1.17 0.00 0.00 2.29
212 213 7.840342 AGACTCTTGTTATTCAGCTTATGTG 57.160 36.000 0.00 0.00 0.00 3.21
213 214 7.390027 AGACTCTTGTTATTCAGCTTATGTGT 58.610 34.615 0.00 0.00 0.00 3.72
214 215 7.332926 AGACTCTTGTTATTCAGCTTATGTGTG 59.667 37.037 0.00 0.00 0.00 3.82
215 216 6.936900 ACTCTTGTTATTCAGCTTATGTGTGT 59.063 34.615 0.00 0.00 0.00 3.72
216 217 7.445402 ACTCTTGTTATTCAGCTTATGTGTGTT 59.555 33.333 0.00 0.00 0.00 3.32
217 218 7.806690 TCTTGTTATTCAGCTTATGTGTGTTC 58.193 34.615 0.00 0.00 0.00 3.18
218 219 7.443879 TCTTGTTATTCAGCTTATGTGTGTTCA 59.556 33.333 0.00 0.00 0.00 3.18
219 220 7.132694 TGTTATTCAGCTTATGTGTGTTCAG 57.867 36.000 0.00 0.00 0.00 3.02
220 221 6.710295 TGTTATTCAGCTTATGTGTGTTCAGT 59.290 34.615 0.00 0.00 0.00 3.41
221 222 5.618056 ATTCAGCTTATGTGTGTTCAGTG 57.382 39.130 0.00 0.00 0.00 3.66
222 223 4.335400 TCAGCTTATGTGTGTTCAGTGA 57.665 40.909 0.00 0.00 0.00 3.41
223 224 4.309933 TCAGCTTATGTGTGTTCAGTGAG 58.690 43.478 0.00 0.00 0.00 3.51
224 225 3.070018 AGCTTATGTGTGTTCAGTGAGC 58.930 45.455 0.00 0.00 0.00 4.26
225 226 2.807967 GCTTATGTGTGTTCAGTGAGCA 59.192 45.455 5.45 5.45 0.00 4.26
226 227 3.438087 GCTTATGTGTGTTCAGTGAGCAT 59.562 43.478 13.12 7.09 0.00 3.79
227 228 4.083110 GCTTATGTGTGTTCAGTGAGCATT 60.083 41.667 13.12 2.13 0.00 3.56
228 229 3.909776 ATGTGTGTTCAGTGAGCATTG 57.090 42.857 13.12 0.00 0.00 2.82
229 230 2.916640 TGTGTGTTCAGTGAGCATTGA 58.083 42.857 13.12 0.00 0.00 2.57
230 231 3.479489 TGTGTGTTCAGTGAGCATTGAT 58.521 40.909 13.12 0.00 0.00 2.57
231 232 3.499537 TGTGTGTTCAGTGAGCATTGATC 59.500 43.478 13.12 0.51 0.00 2.92
232 233 3.750130 GTGTGTTCAGTGAGCATTGATCT 59.250 43.478 13.12 0.00 0.00 2.75
233 234 3.999001 TGTGTTCAGTGAGCATTGATCTC 59.001 43.478 13.12 0.00 0.00 2.75
234 235 4.252073 GTGTTCAGTGAGCATTGATCTCT 58.748 43.478 13.12 2.01 0.00 3.10
235 236 4.093115 GTGTTCAGTGAGCATTGATCTCTG 59.907 45.833 21.84 21.84 39.77 3.35
236 237 3.538634 TCAGTGAGCATTGATCTCTGG 57.461 47.619 25.26 12.68 39.18 3.86
237 238 2.169978 TCAGTGAGCATTGATCTCTGGG 59.830 50.000 25.26 8.81 39.18 4.45
238 239 2.169978 CAGTGAGCATTGATCTCTGGGA 59.830 50.000 20.68 0.00 36.39 4.37
239 240 3.047115 AGTGAGCATTGATCTCTGGGAT 58.953 45.455 5.75 0.00 37.37 3.85
250 251 2.092323 TCTCTGGGATCACTGTACACG 58.908 52.381 0.00 0.00 0.00 4.49
251 252 1.819288 CTCTGGGATCACTGTACACGT 59.181 52.381 0.00 0.00 0.00 4.49
252 253 1.544246 TCTGGGATCACTGTACACGTG 59.456 52.381 15.48 15.48 0.00 4.49
253 254 0.037697 TGGGATCACTGTACACGTGC 60.038 55.000 17.22 0.00 32.54 5.34
254 255 0.037697 GGGATCACTGTACACGTGCA 60.038 55.000 17.22 5.50 32.54 4.57
255 256 1.405526 GGGATCACTGTACACGTGCAT 60.406 52.381 17.22 0.00 32.54 3.96
256 257 2.346803 GGATCACTGTACACGTGCATT 58.653 47.619 17.22 0.00 32.54 3.56
257 258 2.348666 GGATCACTGTACACGTGCATTC 59.651 50.000 17.22 4.22 32.54 2.67
258 259 1.414378 TCACTGTACACGTGCATTCG 58.586 50.000 17.22 3.13 32.54 3.34
259 260 0.438445 CACTGTACACGTGCATTCGG 59.562 55.000 17.22 10.84 34.94 4.30
260 261 0.032952 ACTGTACACGTGCATTCGGT 59.967 50.000 17.22 11.47 34.94 4.69
261 262 0.438445 CTGTACACGTGCATTCGGTG 59.562 55.000 17.22 5.33 34.94 4.94
262 263 0.032267 TGTACACGTGCATTCGGTGA 59.968 50.000 17.22 0.00 34.94 4.02
263 264 1.337354 TGTACACGTGCATTCGGTGAT 60.337 47.619 17.22 0.00 34.94 3.06
264 265 1.323534 GTACACGTGCATTCGGTGATC 59.676 52.381 17.22 0.00 34.94 2.92
265 266 0.320334 ACACGTGCATTCGGTGATCA 60.320 50.000 17.22 0.00 34.94 2.92
266 267 1.009078 CACGTGCATTCGGTGATCAT 58.991 50.000 0.82 0.00 34.94 2.45
267 268 1.009078 ACGTGCATTCGGTGATCATG 58.991 50.000 0.00 0.00 34.94 3.07
268 269 1.289276 CGTGCATTCGGTGATCATGA 58.711 50.000 0.00 0.00 0.00 3.07
269 270 1.004610 CGTGCATTCGGTGATCATGAC 60.005 52.381 0.00 0.00 0.00 3.06
270 271 2.283298 GTGCATTCGGTGATCATGACT 58.717 47.619 0.00 0.00 0.00 3.41
271 272 2.679837 GTGCATTCGGTGATCATGACTT 59.320 45.455 0.00 0.00 0.00 3.01
272 273 3.871006 GTGCATTCGGTGATCATGACTTA 59.129 43.478 0.00 0.00 0.00 2.24
273 274 4.512944 GTGCATTCGGTGATCATGACTTAT 59.487 41.667 0.00 0.00 0.00 1.73
274 275 4.512571 TGCATTCGGTGATCATGACTTATG 59.487 41.667 0.00 3.14 38.17 1.90
286 287 0.751452 GACTTATGAGTCGGGGTCCC 59.249 60.000 0.00 0.00 42.60 4.46
287 288 0.690077 ACTTATGAGTCGGGGTCCCC 60.690 60.000 18.34 18.34 41.09 4.81
288 289 0.689745 CTTATGAGTCGGGGTCCCCA 60.690 60.000 27.45 11.28 45.83 4.96
289 290 0.979187 TTATGAGTCGGGGTCCCCAC 60.979 60.000 27.45 21.74 45.83 4.61
290 291 2.170908 TATGAGTCGGGGTCCCCACA 62.171 60.000 27.45 19.30 45.83 4.17
404 405 6.318144 TGCACCATAAATTAAAATTGCCATGG 59.682 34.615 7.63 7.63 38.14 3.66
570 572 5.181245 GCAACTACAGTGTAAACATCATGGT 59.819 40.000 4.21 0.00 0.00 3.55
610 617 7.473691 AAAAATTCGTCGAAACATATCAACG 57.526 32.000 12.40 0.00 0.00 4.10
635 642 3.866327 GGGTCTAGTTTTGAAGATCTCGC 59.134 47.826 0.00 0.00 0.00 5.03
771 779 6.974048 CGTGGCAAAATAAATGATGATGAAGA 59.026 34.615 0.00 0.00 0.00 2.87
794 802 1.825622 TGGGTGATGTGCAAACGCA 60.826 52.632 0.00 0.00 41.39 5.24
826 834 3.124128 GGGCGTTAGTTTTTCCGTAGAAG 59.876 47.826 0.00 0.00 32.35 2.85
828 836 4.143242 GGCGTTAGTTTTTCCGTAGAAGAC 60.143 45.833 0.00 0.00 32.35 3.01
897 905 4.290093 GGCCTAATTCTTCCCCAATTCTT 58.710 43.478 0.00 0.00 0.00 2.52
1458 1476 1.941999 GCAAGCCTCTGGTCATTGCC 61.942 60.000 10.17 0.00 40.20 4.52
1749 1791 1.680338 AGGGTTTCACACAGAGCAAC 58.320 50.000 0.00 0.00 0.00 4.17
1878 1920 3.415087 GGGAGCTGGGCTGATGGT 61.415 66.667 0.00 0.00 39.88 3.55
1926 2006 3.627123 TCAAAGACATCATTATGGCCGTG 59.373 43.478 8.05 0.00 42.75 4.94
1944 2024 2.736721 CGTGCGGTATTTGATAGGGATG 59.263 50.000 0.00 0.00 0.00 3.51
2049 2129 9.811995 ATGAACAAGATTGGATGTTTGATTATG 57.188 29.630 0.00 0.00 39.73 1.90
2097 2177 2.038837 GCTGGTAAGAACGGGCCAC 61.039 63.158 4.39 0.00 0.00 5.01
2108 2188 3.508840 GGGCCACCTGCGAATTCG 61.509 66.667 23.34 23.34 42.61 3.34
2216 2460 2.351738 GGTAGCACCATGTTCAGCAAAC 60.352 50.000 0.00 0.00 38.42 2.93
2242 2486 4.649692 AGCATCTCTAGTATGGCATTTGG 58.350 43.478 4.78 0.00 0.00 3.28
2432 2678 7.225538 CCTGTTGCCATAGAATTAGTCTGTTAG 59.774 40.741 0.00 0.00 37.12 2.34
2619 2872 1.486211 TCTTGGGAACGAGATCCTCC 58.514 55.000 0.00 0.00 46.18 4.30
2648 2901 4.211125 TCAAGGGATGTCAGAGTAGCTAG 58.789 47.826 0.00 0.00 0.00 3.42
2690 2946 1.281577 TGCAGTTGTATCTCCATGCCA 59.718 47.619 0.00 0.00 32.77 4.92
2692 2948 2.292569 GCAGTTGTATCTCCATGCCATG 59.707 50.000 0.00 0.00 0.00 3.66
2819 3077 8.918116 TCTTGCTAGTGATGTTCTGTAGATATT 58.082 33.333 0.00 0.00 0.00 1.28
2863 3121 3.428045 GGAACATAACCTCATTGTGCTGC 60.428 47.826 0.00 0.00 32.83 5.25
3024 3297 1.620822 ATGAAAGTCCTGTGTTGCCC 58.379 50.000 0.00 0.00 0.00 5.36
3146 3419 4.321527 GGGGTCTGAAAAAGCATCTTTGAG 60.322 45.833 0.00 0.00 0.00 3.02
3152 3425 6.662234 TCTGAAAAAGCATCTTTGAGATCCAT 59.338 34.615 0.00 0.00 31.32 3.41
3238 3511 6.090763 CGATGCTGATAGACACACAAAACTTA 59.909 38.462 0.00 0.00 0.00 2.24
3418 3699 8.150296 TCTGTATGACATGGTACCAGATAAATG 58.850 37.037 21.41 14.58 0.00 2.32
3524 3812 7.909641 TGTGCGTTGACAATATAAGATTTCATG 59.090 33.333 0.00 0.00 0.00 3.07
3557 3845 4.227527 ACTTTAAATCCCATCCTCGACCTT 59.772 41.667 0.00 0.00 0.00 3.50
3585 3874 7.254117 CGATACAGTTCATGTTACCATCAAGAC 60.254 40.741 0.00 0.00 39.96 3.01
3590 3879 5.907866 TCATGTTACCATCAAGACGAGTA 57.092 39.130 0.00 0.00 0.00 2.59
3591 3880 5.647589 TCATGTTACCATCAAGACGAGTAC 58.352 41.667 0.00 0.00 0.00 2.73
3592 3881 5.184287 TCATGTTACCATCAAGACGAGTACA 59.816 40.000 0.00 0.00 0.00 2.90
3612 3901 9.517609 GAGTACACATTATAGACGATTTGAAGT 57.482 33.333 0.00 0.00 0.00 3.01
3613 3902 9.871238 AGTACACATTATAGACGATTTGAAGTT 57.129 29.630 0.00 0.00 0.00 2.66
3616 3905 9.436957 ACACATTATAGACGATTTGAAGTTCTT 57.563 29.630 4.17 0.00 0.00 2.52
3650 3939 3.834610 ACGTTGAGTCATACTTTCTCCG 58.165 45.455 0.00 0.00 0.00 4.63
3651 3940 3.255149 ACGTTGAGTCATACTTTCTCCGT 59.745 43.478 0.00 0.00 0.00 4.69
3652 3941 4.235360 CGTTGAGTCATACTTTCTCCGTT 58.765 43.478 0.00 0.00 0.00 4.44
3653 3942 4.323868 CGTTGAGTCATACTTTCTCCGTTC 59.676 45.833 0.00 0.00 0.00 3.95
3654 3943 4.451629 TGAGTCATACTTTCTCCGTTCC 57.548 45.455 0.00 0.00 0.00 3.62
3655 3944 3.830178 TGAGTCATACTTTCTCCGTTCCA 59.170 43.478 0.00 0.00 0.00 3.53
3656 3945 4.466370 TGAGTCATACTTTCTCCGTTCCAT 59.534 41.667 0.00 0.00 0.00 3.41
3657 3946 5.655090 TGAGTCATACTTTCTCCGTTCCATA 59.345 40.000 0.00 0.00 0.00 2.74
3658 3947 6.153851 TGAGTCATACTTTCTCCGTTCCATAA 59.846 38.462 0.00 0.00 0.00 1.90
3659 3948 7.125792 AGTCATACTTTCTCCGTTCCATAAT 57.874 36.000 0.00 0.00 0.00 1.28
3660 3949 8.246430 AGTCATACTTTCTCCGTTCCATAATA 57.754 34.615 0.00 0.00 0.00 0.98
3661 3950 8.871125 AGTCATACTTTCTCCGTTCCATAATAT 58.129 33.333 0.00 0.00 0.00 1.28
3665 3954 7.964604 ACTTTCTCCGTTCCATAATATAAGC 57.035 36.000 0.00 0.00 0.00 3.09
3666 3955 6.645415 ACTTTCTCCGTTCCATAATATAAGCG 59.355 38.462 0.00 0.00 0.00 4.68
3667 3956 5.717078 TCTCCGTTCCATAATATAAGCGT 57.283 39.130 0.00 0.00 0.00 5.07
3668 3957 5.466819 TCTCCGTTCCATAATATAAGCGTG 58.533 41.667 0.00 0.00 0.00 5.34
3669 3958 5.010314 TCTCCGTTCCATAATATAAGCGTGT 59.990 40.000 0.00 0.00 0.00 4.49
3670 3959 5.224888 TCCGTTCCATAATATAAGCGTGTC 58.775 41.667 0.00 0.00 0.00 3.67
3671 3960 4.986034 CCGTTCCATAATATAAGCGTGTCA 59.014 41.667 0.00 0.00 0.00 3.58
3672 3961 5.637810 CCGTTCCATAATATAAGCGTGTCAT 59.362 40.000 0.00 0.00 0.00 3.06
3673 3962 6.147164 CCGTTCCATAATATAAGCGTGTCATT 59.853 38.462 0.00 0.00 0.00 2.57
3674 3963 7.307751 CCGTTCCATAATATAAGCGTGTCATTT 60.308 37.037 0.00 0.00 0.00 2.32
3675 3964 7.530525 CGTTCCATAATATAAGCGTGTCATTTG 59.469 37.037 0.00 0.00 0.00 2.32
3676 3965 8.556194 GTTCCATAATATAAGCGTGTCATTTGA 58.444 33.333 0.00 0.00 0.00 2.69
3677 3966 8.669946 TCCATAATATAAGCGTGTCATTTGAA 57.330 30.769 0.00 0.00 0.00 2.69
3678 3967 8.556194 TCCATAATATAAGCGTGTCATTTGAAC 58.444 33.333 0.00 0.00 0.00 3.18
3679 3968 7.803189 CCATAATATAAGCGTGTCATTTGAACC 59.197 37.037 0.00 0.00 0.00 3.62
3680 3969 6.751514 AATATAAGCGTGTCATTTGAACCA 57.248 33.333 0.00 0.00 0.00 3.67
3681 3970 4.685169 ATAAGCGTGTCATTTGAACCAG 57.315 40.909 0.00 0.00 0.00 4.00
3682 3971 0.593128 AGCGTGTCATTTGAACCAGC 59.407 50.000 0.00 0.00 0.00 4.85
3683 3972 0.310543 GCGTGTCATTTGAACCAGCA 59.689 50.000 0.00 0.00 0.00 4.41
3684 3973 1.268999 GCGTGTCATTTGAACCAGCAA 60.269 47.619 0.00 0.00 0.00 3.91
3685 3974 2.607771 GCGTGTCATTTGAACCAGCAAT 60.608 45.455 0.00 0.00 0.00 3.56
3686 3975 2.981805 CGTGTCATTTGAACCAGCAATG 59.018 45.455 0.00 0.00 0.00 2.82
3687 3976 3.304592 CGTGTCATTTGAACCAGCAATGA 60.305 43.478 0.00 0.00 0.00 2.57
3688 3977 4.232221 GTGTCATTTGAACCAGCAATGAG 58.768 43.478 0.00 0.00 0.00 2.90
3689 3978 3.890756 TGTCATTTGAACCAGCAATGAGT 59.109 39.130 0.00 0.00 0.00 3.41
3690 3979 4.341806 TGTCATTTGAACCAGCAATGAGTT 59.658 37.500 0.00 0.00 0.00 3.01
3691 3980 4.919754 GTCATTTGAACCAGCAATGAGTTC 59.080 41.667 4.86 4.86 40.23 3.01
3692 3981 4.583907 TCATTTGAACCAGCAATGAGTTCA 59.416 37.500 9.00 9.00 45.99 3.18
3693 3982 3.988379 TTGAACCAGCAATGAGTTCAC 57.012 42.857 11.60 0.00 46.96 3.18
3694 3983 2.929641 TGAACCAGCAATGAGTTCACA 58.070 42.857 9.00 0.00 43.60 3.58
3695 3984 3.489355 TGAACCAGCAATGAGTTCACAT 58.511 40.909 9.00 0.00 43.60 3.21
3696 3985 3.890756 TGAACCAGCAATGAGTTCACATT 59.109 39.130 9.00 0.00 43.60 2.71
3697 3986 5.069318 TGAACCAGCAATGAGTTCACATTA 58.931 37.500 9.00 0.00 43.60 1.90
3698 3987 5.711506 TGAACCAGCAATGAGTTCACATTAT 59.288 36.000 9.00 0.00 43.60 1.28
3699 3988 6.883756 TGAACCAGCAATGAGTTCACATTATA 59.116 34.615 9.00 0.00 43.60 0.98
3700 3989 6.932356 ACCAGCAATGAGTTCACATTATAG 57.068 37.500 0.00 0.00 38.25 1.31
3701 3990 6.653020 ACCAGCAATGAGTTCACATTATAGA 58.347 36.000 0.00 0.00 38.25 1.98
3702 3991 6.540189 ACCAGCAATGAGTTCACATTATAGAC 59.460 38.462 0.00 0.00 38.25 2.59
3703 3992 6.292542 CCAGCAATGAGTTCACATTATAGACG 60.293 42.308 0.00 0.00 38.25 4.18
3704 3993 6.476706 CAGCAATGAGTTCACATTATAGACGA 59.523 38.462 0.00 0.00 38.25 4.20
3705 3994 7.170489 CAGCAATGAGTTCACATTATAGACGAT 59.830 37.037 0.00 0.00 38.25 3.73
3706 3995 7.712639 AGCAATGAGTTCACATTATAGACGATT 59.287 33.333 0.00 0.00 38.25 3.34
3707 3996 8.006590 GCAATGAGTTCACATTATAGACGATTC 58.993 37.037 0.00 0.00 38.25 2.52
3708 3997 7.859613 ATGAGTTCACATTATAGACGATTCG 57.140 36.000 4.14 4.14 0.00 3.34
3709 3998 7.023197 TGAGTTCACATTATAGACGATTCGA 57.977 36.000 13.95 0.00 0.00 3.71
3710 3999 7.477494 TGAGTTCACATTATAGACGATTCGAA 58.523 34.615 13.95 0.00 0.00 3.71
3711 4000 7.644157 TGAGTTCACATTATAGACGATTCGAAG 59.356 37.037 13.95 0.00 0.00 3.79
3712 4001 6.918569 AGTTCACATTATAGACGATTCGAAGG 59.081 38.462 13.95 0.28 0.00 3.46
3713 4002 5.220381 TCACATTATAGACGATTCGAAGGC 58.780 41.667 13.95 0.00 0.00 4.35
3714 4003 5.009710 TCACATTATAGACGATTCGAAGGCT 59.990 40.000 13.95 0.35 0.00 4.58
3715 4004 5.117745 CACATTATAGACGATTCGAAGGCTG 59.882 44.000 13.95 4.09 0.00 4.85
3716 4005 4.913335 TTATAGACGATTCGAAGGCTGT 57.087 40.909 13.95 0.00 0.00 4.40
3736 4025 0.867753 TTTTTGCGCGACGTTGCATT 60.868 45.000 26.71 0.00 41.42 3.56
3737 4026 1.265462 TTTTGCGCGACGTTGCATTC 61.265 50.000 26.71 15.17 41.42 2.67
3738 4027 3.902507 TTGCGCGACGTTGCATTCG 62.903 57.895 26.71 11.89 41.42 3.34
3740 4029 2.018670 CGCGACGTTGCATTCGAG 59.981 61.111 26.71 6.16 37.43 4.04
3743 4032 0.785708 GCGACGTTGCATTCGAGTTG 60.786 55.000 23.02 5.02 37.43 3.16
3744 4033 0.781787 CGACGTTGCATTCGAGTTGA 59.218 50.000 16.52 0.00 37.43 3.18
3745 4034 1.460267 CGACGTTGCATTCGAGTTGAC 60.460 52.381 16.52 0.00 37.43 3.18
3746 4035 1.525197 GACGTTGCATTCGAGTTGACA 59.475 47.619 16.52 0.00 0.00 3.58
3747 4036 1.937223 ACGTTGCATTCGAGTTGACAA 59.063 42.857 16.52 3.43 0.00 3.18
3748 4037 2.032894 ACGTTGCATTCGAGTTGACAAG 60.033 45.455 16.52 0.00 0.00 3.16
3749 4038 2.220824 CGTTGCATTCGAGTTGACAAGA 59.779 45.455 6.02 0.00 0.00 3.02
3750 4039 3.545633 GTTGCATTCGAGTTGACAAGAC 58.454 45.455 0.00 0.00 0.00 3.01
3751 4040 1.792367 TGCATTCGAGTTGACAAGACG 59.208 47.619 7.38 7.38 0.00 4.18
3752 4041 2.058798 GCATTCGAGTTGACAAGACGA 58.941 47.619 11.04 11.04 0.00 4.20
3753 4042 2.091277 GCATTCGAGTTGACAAGACGAG 59.909 50.000 13.58 7.39 34.64 4.18
3754 4043 3.309388 CATTCGAGTTGACAAGACGAGT 58.691 45.455 13.58 9.98 34.64 4.18
3755 4044 3.431922 TTCGAGTTGACAAGACGAGTT 57.568 42.857 13.58 0.00 34.64 3.01
3756 4045 2.727777 TCGAGTTGACAAGACGAGTTG 58.272 47.619 11.04 0.00 0.00 3.16
3757 4046 2.356695 TCGAGTTGACAAGACGAGTTGA 59.643 45.455 11.04 0.00 0.00 3.18
3758 4047 2.468040 CGAGTTGACAAGACGAGTTGAC 59.532 50.000 8.22 3.49 0.00 3.18
3759 4048 3.444916 GAGTTGACAAGACGAGTTGACA 58.555 45.455 8.22 5.75 31.59 3.58
3760 4049 3.857052 AGTTGACAAGACGAGTTGACAA 58.143 40.909 12.39 12.39 38.95 3.18
3761 4050 3.865745 AGTTGACAAGACGAGTTGACAAG 59.134 43.478 15.18 0.00 40.88 3.16
3762 4051 3.793797 TGACAAGACGAGTTGACAAGA 57.206 42.857 8.22 0.00 30.73 3.02
3763 4052 3.444916 TGACAAGACGAGTTGACAAGAC 58.555 45.455 8.22 0.00 30.73 3.01
3764 4053 3.119280 TGACAAGACGAGTTGACAAGACA 60.119 43.478 8.22 0.00 30.73 3.41
3765 4054 3.448686 ACAAGACGAGTTGACAAGACAG 58.551 45.455 8.22 0.00 0.00 3.51
3766 4055 3.130516 ACAAGACGAGTTGACAAGACAGA 59.869 43.478 8.22 0.00 0.00 3.41
3767 4056 3.634568 AGACGAGTTGACAAGACAGAG 57.365 47.619 0.00 0.00 0.00 3.35
3768 4057 2.055100 GACGAGTTGACAAGACAGAGC 58.945 52.381 0.00 0.00 0.00 4.09
3769 4058 1.683917 ACGAGTTGACAAGACAGAGCT 59.316 47.619 0.00 0.00 0.00 4.09
3770 4059 2.057316 CGAGTTGACAAGACAGAGCTG 58.943 52.381 0.00 0.00 0.00 4.24
3771 4060 2.287849 CGAGTTGACAAGACAGAGCTGA 60.288 50.000 4.21 0.00 0.00 4.26
3772 4061 3.613671 CGAGTTGACAAGACAGAGCTGAT 60.614 47.826 4.21 0.00 0.00 2.90
3773 4062 3.661944 AGTTGACAAGACAGAGCTGATG 58.338 45.455 4.21 0.00 0.00 3.07
3774 4063 3.070734 AGTTGACAAGACAGAGCTGATGT 59.929 43.478 4.21 0.00 0.00 3.06
3775 4064 4.281941 AGTTGACAAGACAGAGCTGATGTA 59.718 41.667 4.21 0.00 0.00 2.29
3776 4065 5.046735 AGTTGACAAGACAGAGCTGATGTAT 60.047 40.000 4.21 0.00 0.00 2.29
3777 4066 5.411831 TGACAAGACAGAGCTGATGTATT 57.588 39.130 4.21 0.00 32.58 1.89
3778 4067 5.798132 TGACAAGACAGAGCTGATGTATTT 58.202 37.500 4.21 0.67 30.06 1.40
3779 4068 5.640783 TGACAAGACAGAGCTGATGTATTTG 59.359 40.000 16.25 16.25 30.06 2.32
3780 4069 5.798132 ACAAGACAGAGCTGATGTATTTGA 58.202 37.500 20.78 0.00 30.06 2.69
3781 4070 6.233434 ACAAGACAGAGCTGATGTATTTGAA 58.767 36.000 20.78 0.00 30.06 2.69
3782 4071 6.148480 ACAAGACAGAGCTGATGTATTTGAAC 59.852 38.462 20.78 4.04 30.06 3.18
3783 4072 5.181748 AGACAGAGCTGATGTATTTGAACC 58.818 41.667 4.21 0.00 0.00 3.62
3784 4073 4.910195 ACAGAGCTGATGTATTTGAACCA 58.090 39.130 4.21 0.00 0.00 3.67
3793 4082 7.545265 GCTGATGTATTTGAACCAGCAAAAATA 59.455 33.333 0.00 0.00 44.40 1.40
3824 4113 0.250124 TGGTGGTTTGCTCTACCGTG 60.250 55.000 0.00 0.00 41.00 4.94
3827 4116 0.981183 TGGTTTGCTCTACCGTGGAT 59.019 50.000 0.00 0.00 38.55 3.41
3830 4119 2.423577 GTTTGCTCTACCGTGGATGTT 58.576 47.619 0.00 0.00 0.00 2.71
3831 4120 2.093306 TTGCTCTACCGTGGATGTTG 57.907 50.000 0.00 0.00 0.00 3.33
3832 4121 1.262417 TGCTCTACCGTGGATGTTGA 58.738 50.000 0.00 0.00 0.00 3.18
3833 4122 1.204704 TGCTCTACCGTGGATGTTGAG 59.795 52.381 0.00 0.00 38.22 3.02
3834 4123 1.471676 GCTCTACCGTGGATGTTGAGG 60.472 57.143 0.00 0.00 36.50 3.86
3835 4124 2.100197 CTCTACCGTGGATGTTGAGGA 58.900 52.381 0.00 0.00 33.69 3.71
3836 4125 2.695666 CTCTACCGTGGATGTTGAGGAT 59.304 50.000 0.00 0.00 33.69 3.24
3837 4126 2.430694 TCTACCGTGGATGTTGAGGATG 59.569 50.000 0.00 0.00 0.00 3.51
3838 4127 0.253044 ACCGTGGATGTTGAGGATGG 59.747 55.000 0.00 0.00 0.00 3.51
3839 4128 0.464373 CCGTGGATGTTGAGGATGGG 60.464 60.000 0.00 0.00 0.00 4.00
3840 4129 0.541392 CGTGGATGTTGAGGATGGGA 59.459 55.000 0.00 0.00 0.00 4.37
3841 4130 1.473965 CGTGGATGTTGAGGATGGGAG 60.474 57.143 0.00 0.00 0.00 4.30
3842 4131 1.133976 GTGGATGTTGAGGATGGGAGG 60.134 57.143 0.00 0.00 0.00 4.30
3843 4132 0.475906 GGATGTTGAGGATGGGAGGG 59.524 60.000 0.00 0.00 0.00 4.30
3844 4133 0.475906 GATGTTGAGGATGGGAGGGG 59.524 60.000 0.00 0.00 0.00 4.79
3845 4134 0.995675 ATGTTGAGGATGGGAGGGGG 60.996 60.000 0.00 0.00 0.00 5.40
3876 4165 0.755686 GCGGAGGGAGTTGAGATGAT 59.244 55.000 0.00 0.00 0.00 2.45
3878 4167 1.069823 CGGAGGGAGTTGAGATGATGG 59.930 57.143 0.00 0.00 0.00 3.51
3879 4168 1.202746 GGAGGGAGTTGAGATGATGGC 60.203 57.143 0.00 0.00 0.00 4.40
3880 4169 1.487976 GAGGGAGTTGAGATGATGGCA 59.512 52.381 0.00 0.00 0.00 4.92
3894 4183 5.306419 AGATGATGGCAGCTCTAAGATGTAA 59.694 40.000 3.69 0.00 35.46 2.41
3929 4220 0.250770 ACCTTTTGTCTTCCTCCCGC 60.251 55.000 0.00 0.00 0.00 6.13
3930 4221 0.250727 CCTTTTGTCTTCCTCCCGCA 60.251 55.000 0.00 0.00 0.00 5.69
3969 4282 2.506957 GGGGTGGTTGGCAAGGTTG 61.507 63.158 0.00 0.00 0.00 3.77
3983 4296 3.243068 GCAAGGTTGACTTAGTGGTGTTG 60.243 47.826 0.00 0.00 37.29 3.33
4003 4316 1.066454 GCTCTAGAACGGAAGAGGAGC 59.934 57.143 0.00 0.00 39.73 4.70
4055 4376 4.036027 CCACGATGATTGAATCCCTCTTTG 59.964 45.833 2.26 1.03 0.00 2.77
4059 4380 5.996513 CGATGATTGAATCCCTCTTTGATCT 59.003 40.000 2.26 0.00 0.00 2.75
4064 4385 4.848357 TGAATCCCTCTTTGATCTCAACC 58.152 43.478 0.00 0.00 35.28 3.77
4106 4427 1.937546 CTCCGGTCAAGGGCATTTGC 61.938 60.000 0.00 0.00 41.14 3.68
4117 4438 1.226773 GCATTTGCAGGTCATCGCC 60.227 57.895 0.00 0.00 41.59 5.54
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 9.778741 GTCACCAAGGTATTCTTCATTATATCA 57.221 33.333 0.00 0.00 32.41 2.15
6 7 8.926710 CGTCACCAAGGTATTCTTCATTATATC 58.073 37.037 0.00 0.00 32.41 1.63
7 8 8.647796 TCGTCACCAAGGTATTCTTCATTATAT 58.352 33.333 0.00 0.00 32.41 0.86
8 9 8.014070 TCGTCACCAAGGTATTCTTCATTATA 57.986 34.615 0.00 0.00 32.41 0.98
9 10 6.884832 TCGTCACCAAGGTATTCTTCATTAT 58.115 36.000 0.00 0.00 32.41 1.28
10 11 6.288941 TCGTCACCAAGGTATTCTTCATTA 57.711 37.500 0.00 0.00 32.41 1.90
11 12 5.160607 TCGTCACCAAGGTATTCTTCATT 57.839 39.130 0.00 0.00 32.41 2.57
12 13 4.819105 TCGTCACCAAGGTATTCTTCAT 57.181 40.909 0.00 0.00 32.41 2.57
13 14 4.312443 GTTCGTCACCAAGGTATTCTTCA 58.688 43.478 0.00 0.00 32.41 3.02
14 15 3.367025 CGTTCGTCACCAAGGTATTCTTC 59.633 47.826 0.00 0.00 32.41 2.87
15 16 3.243975 ACGTTCGTCACCAAGGTATTCTT 60.244 43.478 0.00 0.00 35.79 2.52
16 17 2.298163 ACGTTCGTCACCAAGGTATTCT 59.702 45.455 0.00 0.00 0.00 2.40
17 18 2.410730 CACGTTCGTCACCAAGGTATTC 59.589 50.000 0.00 0.00 0.00 1.75
18 19 2.409975 CACGTTCGTCACCAAGGTATT 58.590 47.619 0.00 0.00 0.00 1.89
19 20 1.938016 GCACGTTCGTCACCAAGGTAT 60.938 52.381 0.00 0.00 0.00 2.73
20 21 0.598158 GCACGTTCGTCACCAAGGTA 60.598 55.000 0.00 0.00 0.00 3.08
21 22 1.885850 GCACGTTCGTCACCAAGGT 60.886 57.895 0.00 0.00 0.00 3.50
22 23 2.935955 GCACGTTCGTCACCAAGG 59.064 61.111 0.00 0.00 0.00 3.61
23 24 1.876453 CTCGCACGTTCGTCACCAAG 61.876 60.000 7.61 0.00 0.00 3.61
24 25 1.947146 CTCGCACGTTCGTCACCAA 60.947 57.895 7.61 0.00 0.00 3.67
25 26 2.354188 CTCGCACGTTCGTCACCA 60.354 61.111 7.61 0.00 0.00 4.17
26 27 2.791396 TAGCTCGCACGTTCGTCACC 62.791 60.000 7.61 0.00 0.00 4.02
27 28 1.396543 CTAGCTCGCACGTTCGTCAC 61.397 60.000 7.61 0.00 0.00 3.67
28 29 1.154282 CTAGCTCGCACGTTCGTCA 60.154 57.895 7.61 0.00 0.00 4.35
29 30 1.868251 CCTAGCTCGCACGTTCGTC 60.868 63.158 7.61 1.12 0.00 4.20
30 31 2.178521 CCTAGCTCGCACGTTCGT 59.821 61.111 7.61 0.00 0.00 3.85
31 32 1.868251 GTCCTAGCTCGCACGTTCG 60.868 63.158 0.00 0.00 0.00 3.95
32 33 1.868251 CGTCCTAGCTCGCACGTTC 60.868 63.158 0.00 0.00 0.00 3.95
33 34 2.178521 CGTCCTAGCTCGCACGTT 59.821 61.111 0.00 0.00 0.00 3.99
44 45 0.039180 TCTGACTGGGAAGCGTCCTA 59.961 55.000 18.54 11.77 44.28 2.94
45 46 0.832135 TTCTGACTGGGAAGCGTCCT 60.832 55.000 18.54 0.00 44.28 3.85
46 47 0.250513 ATTCTGACTGGGAAGCGTCC 59.749 55.000 10.61 10.61 44.10 4.79
47 48 1.363744 CATTCTGACTGGGAAGCGTC 58.636 55.000 0.00 0.00 0.00 5.19
48 49 0.674895 GCATTCTGACTGGGAAGCGT 60.675 55.000 0.00 0.00 0.00 5.07
49 50 1.372087 GGCATTCTGACTGGGAAGCG 61.372 60.000 0.00 0.00 0.00 4.68
50 51 0.034670 AGGCATTCTGACTGGGAAGC 60.035 55.000 0.00 0.00 31.94 3.86
57 58 1.958288 ACCCTACAGGCATTCTGACT 58.042 50.000 0.00 0.00 46.18 3.41
58 59 2.789409 AACCCTACAGGCATTCTGAC 57.211 50.000 0.00 0.00 46.18 3.51
59 60 3.199946 CCTTAACCCTACAGGCATTCTGA 59.800 47.826 0.00 0.00 46.18 3.27
61 62 3.933861 CCTTAACCCTACAGGCATTCT 57.066 47.619 0.00 0.00 40.58 2.40
67 68 2.158755 CCATCTGCCTTAACCCTACAGG 60.159 54.545 0.00 0.00 43.78 4.00
68 69 2.746472 GCCATCTGCCTTAACCCTACAG 60.746 54.545 0.00 0.00 0.00 2.74
69 70 1.211949 GCCATCTGCCTTAACCCTACA 59.788 52.381 0.00 0.00 0.00 2.74
70 71 1.211949 TGCCATCTGCCTTAACCCTAC 59.788 52.381 0.00 0.00 40.16 3.18
71 72 1.590591 TGCCATCTGCCTTAACCCTA 58.409 50.000 0.00 0.00 40.16 3.53
72 73 0.929244 ATGCCATCTGCCTTAACCCT 59.071 50.000 0.00 0.00 40.16 4.34
73 74 1.035139 CATGCCATCTGCCTTAACCC 58.965 55.000 0.00 0.00 40.16 4.11
74 75 1.035139 CCATGCCATCTGCCTTAACC 58.965 55.000 0.00 0.00 40.16 2.85
75 76 1.035139 CCCATGCCATCTGCCTTAAC 58.965 55.000 0.00 0.00 40.16 2.01
76 77 0.630673 ACCCATGCCATCTGCCTTAA 59.369 50.000 0.00 0.00 40.16 1.85
77 78 0.183492 GACCCATGCCATCTGCCTTA 59.817 55.000 0.00 0.00 40.16 2.69
78 79 1.076485 GACCCATGCCATCTGCCTT 60.076 57.895 0.00 0.00 40.16 4.35
79 80 2.599597 GACCCATGCCATCTGCCT 59.400 61.111 0.00 0.00 40.16 4.75
80 81 2.520260 GGACCCATGCCATCTGCC 60.520 66.667 0.00 0.00 40.16 4.85
81 82 0.971959 TTTGGACCCATGCCATCTGC 60.972 55.000 0.00 0.00 41.77 4.26
82 83 1.784358 ATTTGGACCCATGCCATCTG 58.216 50.000 0.00 0.00 34.90 2.90
83 84 2.555732 AATTTGGACCCATGCCATCT 57.444 45.000 0.00 0.00 34.90 2.90
84 85 3.057315 CGATAATTTGGACCCATGCCATC 60.057 47.826 0.00 0.00 34.90 3.51
85 86 2.892852 CGATAATTTGGACCCATGCCAT 59.107 45.455 0.00 0.00 34.90 4.40
86 87 2.092158 TCGATAATTTGGACCCATGCCA 60.092 45.455 0.00 0.00 0.00 4.92
87 88 2.293399 GTCGATAATTTGGACCCATGCC 59.707 50.000 0.00 0.00 0.00 4.40
88 89 2.032030 CGTCGATAATTTGGACCCATGC 60.032 50.000 0.00 0.00 0.00 4.06
89 90 3.462982 TCGTCGATAATTTGGACCCATG 58.537 45.455 0.00 0.00 0.00 3.66
90 91 3.830744 TCGTCGATAATTTGGACCCAT 57.169 42.857 0.00 0.00 0.00 4.00
91 92 3.196039 TCTTCGTCGATAATTTGGACCCA 59.804 43.478 0.00 0.00 0.00 4.51
92 93 3.788937 TCTTCGTCGATAATTTGGACCC 58.211 45.455 0.00 0.00 0.00 4.46
93 94 5.986004 AATCTTCGTCGATAATTTGGACC 57.014 39.130 0.00 0.00 0.00 4.46
94 95 6.419771 GGAAATCTTCGTCGATAATTTGGAC 58.580 40.000 15.89 6.06 0.00 4.02
95 96 5.233476 CGGAAATCTTCGTCGATAATTTGGA 59.767 40.000 15.89 0.77 0.00 3.53
96 97 5.432157 CGGAAATCTTCGTCGATAATTTGG 58.568 41.667 15.89 7.55 0.00 3.28
97 98 4.898488 GCGGAAATCTTCGTCGATAATTTG 59.102 41.667 15.89 7.48 0.00 2.32
98 99 4.809426 AGCGGAAATCTTCGTCGATAATTT 59.191 37.500 12.55 12.55 0.00 1.82
99 100 4.209288 CAGCGGAAATCTTCGTCGATAATT 59.791 41.667 0.00 0.00 0.00 1.40
100 101 3.736252 CAGCGGAAATCTTCGTCGATAAT 59.264 43.478 0.00 0.00 0.00 1.28
101 102 3.113322 CAGCGGAAATCTTCGTCGATAA 58.887 45.455 0.00 0.00 0.00 1.75
102 103 2.727777 CAGCGGAAATCTTCGTCGATA 58.272 47.619 0.00 0.00 0.00 2.92
103 104 1.560923 CAGCGGAAATCTTCGTCGAT 58.439 50.000 0.00 0.00 0.00 3.59
104 105 1.076533 GCAGCGGAAATCTTCGTCGA 61.077 55.000 0.00 0.00 0.00 4.20
105 106 1.345176 GCAGCGGAAATCTTCGTCG 59.655 57.895 0.00 0.00 0.00 5.12
106 107 1.076533 TCGCAGCGGAAATCTTCGTC 61.077 55.000 16.42 0.00 0.00 4.20
107 108 0.669318 TTCGCAGCGGAAATCTTCGT 60.669 50.000 16.42 0.00 0.00 3.85
108 109 0.025513 CTTCGCAGCGGAAATCTTCG 59.974 55.000 16.42 0.00 0.00 3.79
109 110 1.079503 ACTTCGCAGCGGAAATCTTC 58.920 50.000 16.42 0.00 0.00 2.87
110 111 1.523758 AACTTCGCAGCGGAAATCTT 58.476 45.000 16.42 0.00 0.00 2.40
111 112 2.380084 TAACTTCGCAGCGGAAATCT 57.620 45.000 16.42 0.00 0.00 2.40
112 113 3.802685 AGTATAACTTCGCAGCGGAAATC 59.197 43.478 16.42 0.00 0.00 2.17
113 114 3.793559 AGTATAACTTCGCAGCGGAAAT 58.206 40.909 16.42 2.67 0.00 2.17
114 115 3.184541 GAGTATAACTTCGCAGCGGAAA 58.815 45.455 16.42 1.29 0.00 3.13
115 116 2.164827 TGAGTATAACTTCGCAGCGGAA 59.835 45.455 16.42 7.21 0.00 4.30
116 117 1.746787 TGAGTATAACTTCGCAGCGGA 59.253 47.619 16.42 4.88 0.00 5.54
117 118 2.203800 TGAGTATAACTTCGCAGCGG 57.796 50.000 16.42 1.60 0.00 5.52
118 119 4.091509 AGTTTTGAGTATAACTTCGCAGCG 59.908 41.667 9.06 9.06 0.00 5.18
119 120 5.532025 AGTTTTGAGTATAACTTCGCAGC 57.468 39.130 0.00 0.00 0.00 5.25
120 121 5.571741 TCGAGTTTTGAGTATAACTTCGCAG 59.428 40.000 0.00 0.00 0.00 5.18
121 122 5.344128 GTCGAGTTTTGAGTATAACTTCGCA 59.656 40.000 0.00 0.00 0.00 5.10
122 123 5.220172 GGTCGAGTTTTGAGTATAACTTCGC 60.220 44.000 0.00 0.00 0.00 4.70
123 124 5.860182 TGGTCGAGTTTTGAGTATAACTTCG 59.140 40.000 0.00 0.00 0.00 3.79
124 125 7.829378 ATGGTCGAGTTTTGAGTATAACTTC 57.171 36.000 0.00 0.00 0.00 3.01
125 126 9.886132 ATTATGGTCGAGTTTTGAGTATAACTT 57.114 29.630 0.00 0.00 0.00 2.66
126 127 9.314321 CATTATGGTCGAGTTTTGAGTATAACT 57.686 33.333 0.00 0.00 0.00 2.24
127 128 8.548721 CCATTATGGTCGAGTTTTGAGTATAAC 58.451 37.037 2.48 0.00 31.35 1.89
128 129 8.657074 CCATTATGGTCGAGTTTTGAGTATAA 57.343 34.615 2.48 0.00 31.35 0.98
164 165 9.292195 TCTTACATCCATACATATCGTCTTACA 57.708 33.333 0.00 0.00 0.00 2.41
165 166 9.557338 GTCTTACATCCATACATATCGTCTTAC 57.443 37.037 0.00 0.00 0.00 2.34
166 167 9.516546 AGTCTTACATCCATACATATCGTCTTA 57.483 33.333 0.00 0.00 0.00 2.10
167 168 8.410673 AGTCTTACATCCATACATATCGTCTT 57.589 34.615 0.00 0.00 0.00 3.01
168 169 7.885922 AGAGTCTTACATCCATACATATCGTCT 59.114 37.037 0.00 0.00 0.00 4.18
169 170 8.046294 AGAGTCTTACATCCATACATATCGTC 57.954 38.462 0.00 0.00 0.00 4.20
170 171 8.300286 CAAGAGTCTTACATCCATACATATCGT 58.700 37.037 4.74 0.00 0.00 3.73
171 172 8.300286 ACAAGAGTCTTACATCCATACATATCG 58.700 37.037 4.74 0.00 0.00 2.92
172 173 9.988815 AACAAGAGTCTTACATCCATACATATC 57.011 33.333 4.74 0.00 0.00 1.63
176 177 9.817809 GAATAACAAGAGTCTTACATCCATACA 57.182 33.333 4.74 0.00 0.00 2.29
177 178 9.817809 TGAATAACAAGAGTCTTACATCCATAC 57.182 33.333 4.74 0.00 0.00 2.39
179 180 7.497249 GCTGAATAACAAGAGTCTTACATCCAT 59.503 37.037 4.74 0.00 0.00 3.41
180 181 6.818644 GCTGAATAACAAGAGTCTTACATCCA 59.181 38.462 4.74 0.00 0.00 3.41
181 182 7.044798 AGCTGAATAACAAGAGTCTTACATCC 58.955 38.462 4.74 0.00 0.00 3.51
182 183 8.485976 AAGCTGAATAACAAGAGTCTTACATC 57.514 34.615 4.74 1.34 0.00 3.06
184 185 9.371136 CATAAGCTGAATAACAAGAGTCTTACA 57.629 33.333 4.74 0.00 0.00 2.41
185 186 9.372369 ACATAAGCTGAATAACAAGAGTCTTAC 57.628 33.333 4.74 0.00 0.00 2.34
186 187 9.371136 CACATAAGCTGAATAACAAGAGTCTTA 57.629 33.333 4.74 0.00 0.00 2.10
187 188 7.880195 ACACATAAGCTGAATAACAAGAGTCTT 59.120 33.333 0.00 0.00 0.00 3.01
188 189 7.332926 CACACATAAGCTGAATAACAAGAGTCT 59.667 37.037 0.00 0.00 0.00 3.24
189 190 7.118390 ACACACATAAGCTGAATAACAAGAGTC 59.882 37.037 0.00 0.00 0.00 3.36
190 191 6.936900 ACACACATAAGCTGAATAACAAGAGT 59.063 34.615 0.00 0.00 0.00 3.24
191 192 7.369803 ACACACATAAGCTGAATAACAAGAG 57.630 36.000 0.00 0.00 0.00 2.85
192 193 7.443879 TGAACACACATAAGCTGAATAACAAGA 59.556 33.333 0.00 0.00 0.00 3.02
193 194 7.584108 TGAACACACATAAGCTGAATAACAAG 58.416 34.615 0.00 0.00 0.00 3.16
194 195 7.228507 ACTGAACACACATAAGCTGAATAACAA 59.771 33.333 0.00 0.00 0.00 2.83
195 196 6.710295 ACTGAACACACATAAGCTGAATAACA 59.290 34.615 0.00 0.00 0.00 2.41
196 197 7.017645 CACTGAACACACATAAGCTGAATAAC 58.982 38.462 0.00 0.00 0.00 1.89
197 198 6.934083 TCACTGAACACACATAAGCTGAATAA 59.066 34.615 0.00 0.00 0.00 1.40
198 199 6.463360 TCACTGAACACACATAAGCTGAATA 58.537 36.000 0.00 0.00 0.00 1.75
199 200 5.308014 TCACTGAACACACATAAGCTGAAT 58.692 37.500 0.00 0.00 0.00 2.57
200 201 4.702831 TCACTGAACACACATAAGCTGAA 58.297 39.130 0.00 0.00 0.00 3.02
201 202 4.309933 CTCACTGAACACACATAAGCTGA 58.690 43.478 0.00 0.00 0.00 4.26
202 203 3.120408 GCTCACTGAACACACATAAGCTG 60.120 47.826 0.00 0.00 0.00 4.24
203 204 3.070018 GCTCACTGAACACACATAAGCT 58.930 45.455 0.00 0.00 0.00 3.74
204 205 2.807967 TGCTCACTGAACACACATAAGC 59.192 45.455 0.00 0.00 0.00 3.09
205 206 5.179929 TCAATGCTCACTGAACACACATAAG 59.820 40.000 0.00 0.00 0.00 1.73
206 207 5.062528 TCAATGCTCACTGAACACACATAA 58.937 37.500 0.00 0.00 0.00 1.90
207 208 4.640364 TCAATGCTCACTGAACACACATA 58.360 39.130 0.00 0.00 0.00 2.29
208 209 3.479489 TCAATGCTCACTGAACACACAT 58.521 40.909 0.00 0.00 0.00 3.21
209 210 2.916640 TCAATGCTCACTGAACACACA 58.083 42.857 0.00 0.00 0.00 3.72
210 211 3.750130 AGATCAATGCTCACTGAACACAC 59.250 43.478 0.00 0.00 0.00 3.82
211 212 3.999001 GAGATCAATGCTCACTGAACACA 59.001 43.478 0.00 0.00 32.67 3.72
212 213 4.093115 CAGAGATCAATGCTCACTGAACAC 59.907 45.833 5.78 0.00 34.46 3.32
213 214 4.251268 CAGAGATCAATGCTCACTGAACA 58.749 43.478 5.78 0.00 34.46 3.18
214 215 3.622163 CCAGAGATCAATGCTCACTGAAC 59.378 47.826 11.95 0.00 34.46 3.18
215 216 3.370209 CCCAGAGATCAATGCTCACTGAA 60.370 47.826 11.95 0.00 34.46 3.02
216 217 2.169978 CCCAGAGATCAATGCTCACTGA 59.830 50.000 11.95 0.00 34.46 3.41
217 218 2.169978 TCCCAGAGATCAATGCTCACTG 59.830 50.000 4.87 4.87 34.85 3.66
218 219 2.475155 TCCCAGAGATCAATGCTCACT 58.525 47.619 0.00 0.00 34.85 3.41
219 220 2.996249 TCCCAGAGATCAATGCTCAC 57.004 50.000 0.00 0.00 34.85 3.51
229 230 2.690497 CGTGTACAGTGATCCCAGAGAT 59.310 50.000 0.00 0.00 38.17 2.75
230 231 2.092323 CGTGTACAGTGATCCCAGAGA 58.908 52.381 0.00 0.00 0.00 3.10
231 232 1.819288 ACGTGTACAGTGATCCCAGAG 59.181 52.381 0.00 0.00 0.00 3.35
232 233 1.544246 CACGTGTACAGTGATCCCAGA 59.456 52.381 7.58 0.00 41.83 3.86
233 234 1.996292 CACGTGTACAGTGATCCCAG 58.004 55.000 7.58 0.00 41.83 4.45
234 235 0.037697 GCACGTGTACAGTGATCCCA 60.038 55.000 18.38 0.00 41.83 4.37
235 236 0.037697 TGCACGTGTACAGTGATCCC 60.038 55.000 18.38 9.96 41.83 3.85
236 237 2.010145 ATGCACGTGTACAGTGATCC 57.990 50.000 18.38 10.21 41.83 3.36
237 238 2.028045 CGAATGCACGTGTACAGTGATC 59.972 50.000 18.38 16.15 41.83 2.92
238 239 1.992667 CGAATGCACGTGTACAGTGAT 59.007 47.619 18.38 13.02 41.83 3.06
239 240 1.414378 CGAATGCACGTGTACAGTGA 58.586 50.000 18.38 11.82 41.83 3.41
240 241 0.438445 CCGAATGCACGTGTACAGTG 59.562 55.000 18.38 16.47 42.15 3.66
241 242 0.032952 ACCGAATGCACGTGTACAGT 59.967 50.000 18.38 6.62 0.00 3.55
242 243 0.438445 CACCGAATGCACGTGTACAG 59.562 55.000 18.38 7.58 0.00 2.74
243 244 0.032267 TCACCGAATGCACGTGTACA 59.968 50.000 18.38 7.94 0.00 2.90
244 245 1.323534 GATCACCGAATGCACGTGTAC 59.676 52.381 18.38 1.32 0.00 2.90
245 246 1.067495 TGATCACCGAATGCACGTGTA 60.067 47.619 18.38 14.09 0.00 2.90
246 247 0.320334 TGATCACCGAATGCACGTGT 60.320 50.000 18.38 0.00 0.00 4.49
247 248 1.009078 ATGATCACCGAATGCACGTG 58.991 50.000 12.28 12.28 0.00 4.49
248 249 1.009078 CATGATCACCGAATGCACGT 58.991 50.000 0.00 0.00 0.00 4.49
249 250 1.004610 GTCATGATCACCGAATGCACG 60.005 52.381 0.00 0.00 0.00 5.34
250 251 2.283298 AGTCATGATCACCGAATGCAC 58.717 47.619 0.00 0.00 0.00 4.57
251 252 2.696989 AGTCATGATCACCGAATGCA 57.303 45.000 0.00 0.00 0.00 3.96
252 253 4.751600 TCATAAGTCATGATCACCGAATGC 59.248 41.667 0.00 0.00 38.79 3.56
253 254 5.987953 ACTCATAAGTCATGATCACCGAATG 59.012 40.000 0.00 0.00 42.82 2.67
254 255 6.166984 ACTCATAAGTCATGATCACCGAAT 57.833 37.500 0.00 0.00 42.82 3.34
255 256 5.598416 ACTCATAAGTCATGATCACCGAA 57.402 39.130 0.00 0.00 42.82 4.30
268 269 2.912020 GGGACCCCGACTCATAAGT 58.088 57.895 0.00 0.00 38.88 2.24
282 283 5.132502 TGAAACATATCATGATGTGGGGAC 58.867 41.667 29.16 19.27 39.99 4.46
283 284 5.379187 CTGAAACATATCATGATGTGGGGA 58.621 41.667 29.16 13.65 39.99 4.81
284 285 4.022589 GCTGAAACATATCATGATGTGGGG 60.023 45.833 29.16 17.27 39.99 4.96
285 286 4.825634 AGCTGAAACATATCATGATGTGGG 59.174 41.667 29.16 17.01 39.99 4.61
286 287 7.683437 ATAGCTGAAACATATCATGATGTGG 57.317 36.000 29.16 16.02 39.99 4.17
287 288 9.961265 AAAATAGCTGAAACATATCATGATGTG 57.039 29.630 25.73 25.73 39.99 3.21
404 405 7.090173 ACCATGACAATTTTAAGTGCATGTAC 58.910 34.615 5.71 5.71 37.10 2.90
442 444 4.218200 TCCAGTACTTTGACCATGCAAATG 59.782 41.667 0.00 0.00 37.16 2.32
447 449 4.737054 CAATTCCAGTACTTTGACCATGC 58.263 43.478 0.00 0.00 0.00 4.06
610 617 5.167303 AGATCTTCAAAACTAGACCCCAC 57.833 43.478 0.00 0.00 0.00 4.61
719 727 8.693120 ATGAACAGATGATATCAGCAGAATTT 57.307 30.769 22.20 5.68 34.14 1.82
721 729 7.544915 CGTATGAACAGATGATATCAGCAGAAT 59.455 37.037 22.20 12.80 34.14 2.40
732 740 3.541996 TGCCACGTATGAACAGATGAT 57.458 42.857 0.00 0.00 0.00 2.45
771 779 0.749818 TTTGCACATCACCCACACGT 60.750 50.000 0.00 0.00 0.00 4.49
794 802 0.107831 ACTAACGCCCACATGTGTGT 59.892 50.000 23.79 15.90 44.21 3.72
826 834 1.272781 CGCTCGAATTGTCTGGAGTC 58.727 55.000 0.00 0.00 0.00 3.36
828 836 0.737367 TGCGCTCGAATTGTCTGGAG 60.737 55.000 9.73 0.00 0.00 3.86
897 905 3.022406 GTCTAGAGACGGGGAGCTTTTA 58.978 50.000 0.00 0.00 35.12 1.52
1029 1047 2.584418 CGCTCCTGCACGATCCAG 60.584 66.667 0.00 0.00 39.64 3.86
1300 1318 2.432628 GCCGGTGACCTTGACGAG 60.433 66.667 1.90 0.00 0.00 4.18
1458 1476 2.069273 GCGACATAATCCCGGATCTTG 58.931 52.381 0.73 4.35 0.00 3.02
1749 1791 1.068753 ATCCTTGCTGATCCTCGCG 59.931 57.895 0.00 0.00 0.00 5.87
1878 1920 7.124298 AGCATAGAACTTACTGTAGAATGGACA 59.876 37.037 0.00 0.00 0.00 4.02
1926 2006 2.778299 TGCATCCCTATCAAATACCGC 58.222 47.619 0.00 0.00 0.00 5.68
1944 2024 3.432252 CCTATCAAATACCGAACGGATGC 59.568 47.826 20.14 0.00 38.96 3.91
2067 2147 1.993370 CTTACCAGCACGTCTAACTGC 59.007 52.381 0.00 0.00 0.00 4.40
2097 2177 3.885484 ATGCTTATTCGAATTCGCAGG 57.115 42.857 26.86 11.45 39.60 4.85
2108 2188 6.917217 ACAGCTCAAGTTCTATGCTTATTC 57.083 37.500 0.00 0.00 0.00 1.75
2216 2460 7.148289 CCAAATGCCATACTAGAGATGCTAATG 60.148 40.741 0.00 0.00 0.00 1.90
2220 2464 4.506271 CCCAAATGCCATACTAGAGATGCT 60.506 45.833 0.00 0.00 0.00 3.79
2242 2486 9.399797 TGATCATATGCTGAATTATATCAACCC 57.600 33.333 0.00 0.00 37.44 4.11
2432 2678 2.646930 TGGATCACTCCACATTGATGC 58.353 47.619 0.00 0.00 46.95 3.91
2534 2785 5.220739 GGTCAGCATTAGTAGTTCATTGCAG 60.221 44.000 0.00 0.00 32.66 4.41
2619 2872 4.098654 ACTCTGACATCCCTTGATAAGTCG 59.901 45.833 0.00 0.00 30.33 4.18
2648 2901 2.239907 AGGAAGGAATGTTAGGCCACTC 59.760 50.000 5.01 0.00 0.00 3.51
2690 2946 7.966339 AGGCAAATAACCATATGCATATCAT 57.034 32.000 16.46 8.19 40.51 2.45
2692 2948 7.065803 ACGTAGGCAAATAACCATATGCATATC 59.934 37.037 16.46 2.30 37.39 1.63
2789 3046 5.987098 ACAGAACATCACTAGCAAGATGAT 58.013 37.500 20.74 12.72 43.28 2.45
2819 3077 5.293814 TCCTGAACGAAAAATGTGACGTTTA 59.706 36.000 2.84 0.00 46.24 2.01
2863 3121 0.599558 CACCAACCTGACCTGCATTG 59.400 55.000 0.00 0.00 0.00 2.82
3073 3346 1.914798 AGATGAGCTCTTTCCAGCCTT 59.085 47.619 16.19 0.00 40.65 4.35
3146 3419 5.407995 GGATCGACTTCATTGAAGATGGATC 59.592 44.000 28.60 27.97 41.71 3.36
3152 3425 3.525537 GCAGGATCGACTTCATTGAAGA 58.474 45.455 28.60 10.72 41.71 2.87
3238 3511 3.502123 TTCAATTCCCGGAAGTTCACT 57.498 42.857 0.73 0.00 0.00 3.41
3418 3699 7.278203 GCTTGTAGAACTAGAACCTTCAATACC 59.722 40.741 0.00 0.00 0.00 2.73
3524 3812 7.780271 AGGATGGGATTTAAAGTGGACTTAATC 59.220 37.037 6.52 6.52 34.61 1.75
3585 3874 8.556517 TTCAAATCGTCTATAATGTGTACTCG 57.443 34.615 0.00 0.00 0.00 4.18
3590 3879 9.436957 AAGAACTTCAAATCGTCTATAATGTGT 57.563 29.630 0.00 0.00 0.00 3.72
3628 3917 3.852536 CGGAGAAAGTATGACTCAACGTC 59.147 47.826 0.00 0.00 43.14 4.34
3629 3918 3.255149 ACGGAGAAAGTATGACTCAACGT 59.745 43.478 0.00 0.00 33.00 3.99
3630 3919 3.834610 ACGGAGAAAGTATGACTCAACG 58.165 45.455 0.00 0.00 33.00 4.10
3631 3920 4.626172 GGAACGGAGAAAGTATGACTCAAC 59.374 45.833 0.00 0.00 33.00 3.18
3632 3921 4.282449 TGGAACGGAGAAAGTATGACTCAA 59.718 41.667 0.00 0.00 33.00 3.02
3633 3922 3.830178 TGGAACGGAGAAAGTATGACTCA 59.170 43.478 0.00 0.00 33.00 3.41
3634 3923 4.451629 TGGAACGGAGAAAGTATGACTC 57.548 45.455 0.00 0.00 0.00 3.36
3635 3924 6.540438 TTATGGAACGGAGAAAGTATGACT 57.460 37.500 0.00 0.00 0.00 3.41
3639 3928 9.654663 GCTTATATTATGGAACGGAGAAAGTAT 57.345 33.333 0.00 0.00 0.00 2.12
3640 3929 7.811236 CGCTTATATTATGGAACGGAGAAAGTA 59.189 37.037 0.00 0.00 0.00 2.24
3641 3930 6.645415 CGCTTATATTATGGAACGGAGAAAGT 59.355 38.462 0.00 0.00 0.00 2.66
3642 3931 6.645415 ACGCTTATATTATGGAACGGAGAAAG 59.355 38.462 0.00 0.00 0.00 2.62
3643 3932 6.422701 CACGCTTATATTATGGAACGGAGAAA 59.577 38.462 0.00 0.00 0.00 2.52
3644 3933 5.924254 CACGCTTATATTATGGAACGGAGAA 59.076 40.000 0.00 0.00 0.00 2.87
3645 3934 5.010314 ACACGCTTATATTATGGAACGGAGA 59.990 40.000 0.00 0.00 0.00 3.71
3646 3935 5.227908 ACACGCTTATATTATGGAACGGAG 58.772 41.667 0.00 0.00 0.00 4.63
3647 3936 5.204409 ACACGCTTATATTATGGAACGGA 57.796 39.130 0.00 0.00 0.00 4.69
3648 3937 4.986034 TGACACGCTTATATTATGGAACGG 59.014 41.667 0.00 0.00 0.00 4.44
3649 3938 6.706055 ATGACACGCTTATATTATGGAACG 57.294 37.500 0.00 0.00 0.00 3.95
3650 3939 8.556194 TCAAATGACACGCTTATATTATGGAAC 58.444 33.333 0.00 0.00 0.00 3.62
3651 3940 8.669946 TCAAATGACACGCTTATATTATGGAA 57.330 30.769 0.00 0.00 0.00 3.53
3652 3941 8.556194 GTTCAAATGACACGCTTATATTATGGA 58.444 33.333 0.00 0.00 0.00 3.41
3653 3942 7.803189 GGTTCAAATGACACGCTTATATTATGG 59.197 37.037 0.00 0.00 0.00 2.74
3654 3943 8.341903 TGGTTCAAATGACACGCTTATATTATG 58.658 33.333 0.00 0.00 0.00 1.90
3655 3944 8.445275 TGGTTCAAATGACACGCTTATATTAT 57.555 30.769 0.00 0.00 0.00 1.28
3656 3945 7.466725 GCTGGTTCAAATGACACGCTTATATTA 60.467 37.037 0.00 0.00 0.00 0.98
3657 3946 6.677920 GCTGGTTCAAATGACACGCTTATATT 60.678 38.462 0.00 0.00 0.00 1.28
3658 3947 5.220854 GCTGGTTCAAATGACACGCTTATAT 60.221 40.000 0.00 0.00 0.00 0.86
3659 3948 4.094294 GCTGGTTCAAATGACACGCTTATA 59.906 41.667 0.00 0.00 0.00 0.98
3660 3949 3.119849 GCTGGTTCAAATGACACGCTTAT 60.120 43.478 0.00 0.00 0.00 1.73
3661 3950 2.225491 GCTGGTTCAAATGACACGCTTA 59.775 45.455 0.00 0.00 0.00 3.09
3662 3951 1.001378 GCTGGTTCAAATGACACGCTT 60.001 47.619 0.00 0.00 0.00 4.68
3663 3952 0.593128 GCTGGTTCAAATGACACGCT 59.407 50.000 0.00 0.00 0.00 5.07
3664 3953 0.310543 TGCTGGTTCAAATGACACGC 59.689 50.000 0.00 0.00 0.00 5.34
3665 3954 2.772568 TTGCTGGTTCAAATGACACG 57.227 45.000 0.00 0.00 0.00 4.49
3666 3955 4.232221 CTCATTGCTGGTTCAAATGACAC 58.768 43.478 0.00 0.00 0.00 3.67
3667 3956 3.890756 ACTCATTGCTGGTTCAAATGACA 59.109 39.130 0.00 0.00 0.00 3.58
3668 3957 4.510038 ACTCATTGCTGGTTCAAATGAC 57.490 40.909 0.00 0.00 0.00 3.06
3669 3958 4.583907 TGAACTCATTGCTGGTTCAAATGA 59.416 37.500 13.26 0.00 43.84 2.57
3670 3959 4.682860 GTGAACTCATTGCTGGTTCAAATG 59.317 41.667 15.63 0.00 46.72 2.32
3671 3960 4.341806 TGTGAACTCATTGCTGGTTCAAAT 59.658 37.500 15.63 0.00 46.72 2.32
3672 3961 3.698539 TGTGAACTCATTGCTGGTTCAAA 59.301 39.130 15.63 10.96 46.72 2.69
3673 3962 3.286353 TGTGAACTCATTGCTGGTTCAA 58.714 40.909 15.63 8.26 46.72 2.69
3674 3963 2.929641 TGTGAACTCATTGCTGGTTCA 58.070 42.857 12.27 12.27 44.35 3.18
3675 3964 4.510038 AATGTGAACTCATTGCTGGTTC 57.490 40.909 0.00 0.00 36.78 3.62
3676 3965 7.066284 GTCTATAATGTGAACTCATTGCTGGTT 59.934 37.037 10.89 0.00 38.32 3.67
3677 3966 6.540189 GTCTATAATGTGAACTCATTGCTGGT 59.460 38.462 10.89 0.00 38.32 4.00
3678 3967 6.292542 CGTCTATAATGTGAACTCATTGCTGG 60.293 42.308 10.89 3.29 38.32 4.85
3679 3968 6.476706 TCGTCTATAATGTGAACTCATTGCTG 59.523 38.462 10.89 3.39 38.32 4.41
3680 3969 6.573434 TCGTCTATAATGTGAACTCATTGCT 58.427 36.000 10.89 3.46 38.32 3.91
3681 3970 6.828502 TCGTCTATAATGTGAACTCATTGC 57.171 37.500 10.89 0.00 38.32 3.56
3682 3971 8.210525 CGAATCGTCTATAATGTGAACTCATTG 58.789 37.037 10.89 0.00 38.32 2.82
3683 3972 8.135529 TCGAATCGTCTATAATGTGAACTCATT 58.864 33.333 1.52 7.16 40.50 2.57
3684 3973 7.649057 TCGAATCGTCTATAATGTGAACTCAT 58.351 34.615 1.52 0.00 0.00 2.90
3685 3974 7.023197 TCGAATCGTCTATAATGTGAACTCA 57.977 36.000 1.52 0.00 0.00 3.41
3686 3975 7.113684 CCTTCGAATCGTCTATAATGTGAACTC 59.886 40.741 1.52 0.00 0.00 3.01
3687 3976 6.918569 CCTTCGAATCGTCTATAATGTGAACT 59.081 38.462 1.52 0.00 0.00 3.01
3688 3977 6.345882 GCCTTCGAATCGTCTATAATGTGAAC 60.346 42.308 1.52 0.00 0.00 3.18
3689 3978 5.690409 GCCTTCGAATCGTCTATAATGTGAA 59.310 40.000 1.52 0.00 0.00 3.18
3690 3979 5.009710 AGCCTTCGAATCGTCTATAATGTGA 59.990 40.000 1.52 0.00 0.00 3.58
3691 3980 5.117745 CAGCCTTCGAATCGTCTATAATGTG 59.882 44.000 1.52 0.00 0.00 3.21
3692 3981 5.221263 ACAGCCTTCGAATCGTCTATAATGT 60.221 40.000 1.52 0.00 0.00 2.71
3693 3982 5.223382 ACAGCCTTCGAATCGTCTATAATG 58.777 41.667 1.52 0.00 0.00 1.90
3694 3983 5.455056 ACAGCCTTCGAATCGTCTATAAT 57.545 39.130 1.52 0.00 0.00 1.28
3695 3984 4.913335 ACAGCCTTCGAATCGTCTATAA 57.087 40.909 1.52 0.00 0.00 0.98
3696 3985 4.913335 AACAGCCTTCGAATCGTCTATA 57.087 40.909 1.52 0.00 0.00 1.31
3697 3986 3.802948 AACAGCCTTCGAATCGTCTAT 57.197 42.857 1.52 0.00 0.00 1.98
3698 3987 3.587797 AAACAGCCTTCGAATCGTCTA 57.412 42.857 1.52 0.00 0.00 2.59
3699 3988 2.457366 AAACAGCCTTCGAATCGTCT 57.543 45.000 1.52 0.00 0.00 4.18
3700 3989 3.537793 AAAAACAGCCTTCGAATCGTC 57.462 42.857 1.52 0.00 0.00 4.20
3736 4025 2.356695 TCAACTCGTCTTGTCAACTCGA 59.643 45.455 7.01 7.01 0.00 4.04
3737 4026 2.468040 GTCAACTCGTCTTGTCAACTCG 59.532 50.000 0.00 0.02 0.00 4.18
3738 4027 3.444916 TGTCAACTCGTCTTGTCAACTC 58.555 45.455 0.00 0.00 0.00 3.01
3740 4029 3.863424 TCTTGTCAACTCGTCTTGTCAAC 59.137 43.478 4.40 0.00 29.74 3.18
3743 4032 3.444916 TGTCTTGTCAACTCGTCTTGTC 58.555 45.455 0.00 0.00 0.00 3.18
3744 4033 3.130516 TCTGTCTTGTCAACTCGTCTTGT 59.869 43.478 0.00 0.00 0.00 3.16
3745 4034 3.706698 TCTGTCTTGTCAACTCGTCTTG 58.293 45.455 0.00 0.00 0.00 3.02
3746 4035 3.797184 GCTCTGTCTTGTCAACTCGTCTT 60.797 47.826 0.00 0.00 0.00 3.01
3747 4036 2.287909 GCTCTGTCTTGTCAACTCGTCT 60.288 50.000 0.00 0.00 0.00 4.18
3748 4037 2.055100 GCTCTGTCTTGTCAACTCGTC 58.945 52.381 0.00 0.00 0.00 4.20
3749 4038 1.683917 AGCTCTGTCTTGTCAACTCGT 59.316 47.619 0.00 0.00 0.00 4.18
3750 4039 2.057316 CAGCTCTGTCTTGTCAACTCG 58.943 52.381 0.00 0.00 0.00 4.18
3751 4040 3.377346 TCAGCTCTGTCTTGTCAACTC 57.623 47.619 0.00 0.00 0.00 3.01
3752 4041 3.070734 ACATCAGCTCTGTCTTGTCAACT 59.929 43.478 0.00 0.00 0.00 3.16
3753 4042 3.397482 ACATCAGCTCTGTCTTGTCAAC 58.603 45.455 0.00 0.00 0.00 3.18
3754 4043 3.758755 ACATCAGCTCTGTCTTGTCAA 57.241 42.857 0.00 0.00 0.00 3.18
3755 4044 5.411831 AATACATCAGCTCTGTCTTGTCA 57.588 39.130 1.78 0.00 0.00 3.58
3756 4045 5.871524 TCAAATACATCAGCTCTGTCTTGTC 59.128 40.000 1.78 0.00 0.00 3.18
3757 4046 5.798132 TCAAATACATCAGCTCTGTCTTGT 58.202 37.500 1.78 3.30 0.00 3.16
3758 4047 6.402983 GGTTCAAATACATCAGCTCTGTCTTG 60.403 42.308 1.78 7.67 0.00 3.02
3759 4048 5.645497 GGTTCAAATACATCAGCTCTGTCTT 59.355 40.000 1.78 0.00 0.00 3.01
3760 4049 5.181748 GGTTCAAATACATCAGCTCTGTCT 58.818 41.667 1.78 0.00 0.00 3.41
3761 4050 4.937620 TGGTTCAAATACATCAGCTCTGTC 59.062 41.667 1.78 0.00 0.00 3.51
3762 4051 4.910195 TGGTTCAAATACATCAGCTCTGT 58.090 39.130 4.04 4.04 0.00 3.41
3763 4052 4.201891 GCTGGTTCAAATACATCAGCTCTG 60.202 45.833 0.00 0.00 42.77 3.35
3764 4053 3.944015 GCTGGTTCAAATACATCAGCTCT 59.056 43.478 0.00 0.00 42.77 4.09
3765 4054 3.691118 TGCTGGTTCAAATACATCAGCTC 59.309 43.478 13.13 0.00 45.29 4.09
3766 4055 3.689347 TGCTGGTTCAAATACATCAGCT 58.311 40.909 13.13 0.00 45.29 4.24
3767 4056 4.439305 TTGCTGGTTCAAATACATCAGC 57.561 40.909 0.00 0.00 45.28 4.26
3768 4057 7.894376 ATTTTTGCTGGTTCAAATACATCAG 57.106 32.000 0.00 0.00 36.04 2.90
3793 4082 6.891908 AGAGCAAACCACCAATTATGTTCTAT 59.108 34.615 0.00 0.00 0.00 1.98
3824 4113 0.475906 CCCTCCCATCCTCAACATCC 59.524 60.000 0.00 0.00 0.00 3.51
3827 4116 1.619363 CCCCCTCCCATCCTCAACA 60.619 63.158 0.00 0.00 0.00 3.33
3852 4141 4.821589 CAACTCCCTCCGCGCTCC 62.822 72.222 5.56 0.00 0.00 4.70
3868 4157 3.303049 TCTTAGAGCTGCCATCATCTCA 58.697 45.455 0.00 0.00 37.79 3.27
3876 4165 3.800261 GCGATTACATCTTAGAGCTGCCA 60.800 47.826 0.00 0.00 0.00 4.92
3878 4167 2.734079 GGCGATTACATCTTAGAGCTGC 59.266 50.000 0.00 0.00 0.00 5.25
3879 4168 3.982475 TGGCGATTACATCTTAGAGCTG 58.018 45.455 0.00 0.00 0.00 4.24
3880 4169 4.562347 CCATGGCGATTACATCTTAGAGCT 60.562 45.833 0.00 0.00 0.00 4.09
3890 4179 0.106708 GCTCCTCCATGGCGATTACA 59.893 55.000 6.96 0.00 35.26 2.41
3894 4183 2.507944 GTGCTCCTCCATGGCGAT 59.492 61.111 6.96 0.00 35.26 4.58
3929 4220 0.308684 CGAATCCGGACATGCCATTG 59.691 55.000 6.12 0.00 35.94 2.82
3930 4221 2.706636 CGAATCCGGACATGCCATT 58.293 52.632 6.12 0.00 35.94 3.16
3969 4282 4.785511 TCTAGAGCAACACCACTAAGTC 57.214 45.455 0.00 0.00 0.00 3.01
3983 4296 1.066454 GCTCCTCTTCCGTTCTAGAGC 59.934 57.143 0.00 0.00 37.23 4.09
4025 4346 3.558931 TTCAATCATCGTGGGTGCTAT 57.441 42.857 0.00 0.00 0.00 2.97
4055 4376 0.541863 ATGGACCACCGGTTGAGATC 59.458 55.000 13.50 0.00 35.25 2.75
4059 4380 0.036164 CTTGATGGACCACCGGTTGA 59.964 55.000 13.50 0.00 35.25 3.18
4064 4385 2.472695 TTCTTCTTGATGGACCACCG 57.527 50.000 0.00 0.00 39.42 4.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.