Multiple sequence alignment - TraesCS7D01G279500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G279500 chr7D 100.000 3999 0 0 1 3999 271286569 271290567 0.000000e+00 7385.0
1 TraesCS7D01G279500 chr7D 94.704 321 17 0 1 321 550352965 550353285 2.150000e-137 499.0
2 TraesCS7D01G279500 chr7A 94.238 2256 90 18 459 2677 302028686 302030938 0.000000e+00 3410.0
3 TraesCS7D01G279500 chr7A 93.567 1026 42 12 2697 3721 302030918 302031920 0.000000e+00 1507.0
4 TraesCS7D01G279500 chr7A 93.617 141 8 1 318 457 302028388 302028528 4.050000e-50 209.0
5 TraesCS7D01G279500 chr7B 95.805 1907 71 7 318 2219 269800868 269798966 0.000000e+00 3070.0
6 TraesCS7D01G279500 chr7B 95.358 517 20 2 3177 3693 269796076 269795564 0.000000e+00 819.0
7 TraesCS7D01G279500 chr7B 96.341 492 16 2 2695 3186 269796998 269796509 0.000000e+00 808.0
8 TraesCS7D01G279500 chr7B 93.946 479 18 5 2207 2677 269797451 269796976 0.000000e+00 713.0
9 TraesCS7D01G279500 chr7B 92.832 279 20 0 3721 3999 332534273 332533995 4.810000e-109 405.0
10 TraesCS7D01G279500 chr7B 95.652 46 2 0 3676 3721 269791528 269791483 1.540000e-09 75.0
11 TraesCS7D01G279500 chr6D 99.642 279 1 0 3721 3999 20333811 20334089 9.910000e-141 510.0
12 TraesCS7D01G279500 chr6D 97.368 38 1 0 1288 1325 14523233 14523196 9.280000e-07 65.8
13 TraesCS7D01G279500 chr2B 95.570 316 14 0 1 316 80736575 80736260 1.280000e-139 507.0
14 TraesCS7D01G279500 chr2B 97.491 279 7 0 3721 3999 453172943 453172665 1.010000e-130 477.0
15 TraesCS7D01G279500 chr1D 95.000 320 16 0 1 320 106979037 106979356 1.660000e-138 503.0
16 TraesCS7D01G279500 chr1D 79.330 179 24 7 3433 3607 4048740 4048571 3.270000e-21 113.0
17 TraesCS7D01G279500 chr5D 95.253 316 15 0 1 316 130528287 130528602 5.970000e-138 501.0
18 TraesCS7D01G279500 chr5D 96.679 271 7 2 3729 3999 153601096 153600828 2.190000e-122 449.0
19 TraesCS7D01G279500 chr5D 85.507 138 18 2 459 595 375170784 375170920 4.170000e-30 143.0
20 TraesCS7D01G279500 chr5D 83.893 149 20 4 459 605 9015534 9015680 5.390000e-29 139.0
21 TraesCS7D01G279500 chr5B 95.000 320 15 1 1 319 420054764 420054445 5.970000e-138 501.0
22 TraesCS7D01G279500 chr5B 94.190 327 18 1 1 326 407636704 407637030 7.720000e-137 497.0
23 TraesCS7D01G279500 chr4D 94.704 321 16 1 1 321 67180778 67180459 7.720000e-137 497.0
24 TraesCS7D01G279500 chr4D 100.000 30 0 0 1295 1324 2071243 2071272 5.580000e-04 56.5
25 TraesCS7D01G279500 chr2D 94.688 320 16 1 1 319 119417765 119417446 2.780000e-136 496.0
26 TraesCS7D01G279500 chr2D 85.507 138 18 2 459 595 106145621 106145485 4.170000e-30 143.0
27 TraesCS7D01G279500 chr2D 100.000 30 0 0 1295 1324 589503362 589503333 5.580000e-04 56.5
28 TraesCS7D01G279500 chr2A 94.688 320 16 1 1 319 525895340 525895659 2.780000e-136 496.0
29 TraesCS7D01G279500 chr6A 97.849 279 6 0 3721 3999 173117245 173116967 2.160000e-132 483.0
30 TraesCS7D01G279500 chr6B 97.133 279 8 0 3721 3999 452165523 452165245 4.680000e-129 472.0
31 TraesCS7D01G279500 chr6B 94.737 38 2 0 1288 1325 26517291 26517254 4.320000e-05 60.2
32 TraesCS7D01G279500 chr6B 94.737 38 2 0 1288 1325 26650023 26650060 4.320000e-05 60.2
33 TraesCS7D01G279500 chr4B 87.218 133 16 1 463 595 662143111 662143242 2.490000e-32 150.0
34 TraesCS7D01G279500 chr4B 100.000 30 0 0 1295 1324 3785126 3785155 5.580000e-04 56.5
35 TraesCS7D01G279500 chr4A 86.331 139 16 3 459 595 698087904 698087767 8.950000e-32 148.0
36 TraesCS7D01G279500 chr4A 85.507 138 19 1 459 596 542124448 542124312 4.170000e-30 143.0
37 TraesCS7D01G279500 chr1B 86.029 136 18 1 459 594 537688535 537688401 1.160000e-30 145.0
38 TraesCS7D01G279500 chr3B 85.612 139 17 3 459 595 820354908 820354771 4.170000e-30 143.0
39 TraesCS7D01G279500 chr3D 100.000 30 0 0 1295 1324 529496255 529496226 5.580000e-04 56.5
40 TraesCS7D01G279500 chr3A 100.000 30 0 0 1295 1324 663441557 663441528 5.580000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G279500 chr7D 271286569 271290567 3998 False 7385.000000 7385 100.000000 1 3999 1 chr7D.!!$F1 3998
1 TraesCS7D01G279500 chr7A 302028388 302031920 3532 False 1708.666667 3410 93.807333 318 3721 3 chr7A.!!$F1 3403
2 TraesCS7D01G279500 chr7B 269795564 269800868 5304 True 1352.500000 3070 95.362500 318 3693 4 chr7B.!!$R3 3375

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
122 123 0.250234 CCTCCAATCCAGAACTCGCA 59.750 55.000 0.0 0.00 0.00 5.10 F
123 124 1.134280 CCTCCAATCCAGAACTCGCAT 60.134 52.381 0.0 0.00 0.00 4.73 F
125 126 1.278985 TCCAATCCAGAACTCGCATGT 59.721 47.619 0.0 0.00 0.00 3.21 F
1818 2000 0.995675 AGGGCCTCCAGGTTATGCAT 60.996 55.000 0.0 3.79 37.57 3.96 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1683 1865 0.735978 TCACCGTCATCATGTGCGAC 60.736 55.000 6.06 0.0 31.82 5.19 R
1782 1964 2.680352 TCCACCTCGTCCTGGAGC 60.680 66.667 0.00 0.0 32.49 4.70 R
2107 2294 6.206048 GCCAGTGTACTAGTATTTGGTTTTGT 59.794 38.462 21.51 0.0 0.00 2.83 R
3077 4800 0.039035 TGGTATGGGGTGTTGGCTTC 59.961 55.000 0.00 0.0 0.00 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.899427 GACTAAAAGTAGTGGGACTAAAACTT 57.101 34.615 0.00 0.00 40.82 2.66
26 27 8.672823 ACTAAAAGTAGTGGGACTAAAACTTG 57.327 34.615 0.00 0.00 39.20 3.16
27 28 6.387041 AAAAGTAGTGGGACTAAAACTTGC 57.613 37.500 0.00 0.00 31.62 4.01
28 29 4.976540 AGTAGTGGGACTAAAACTTGCT 57.023 40.909 0.00 0.00 31.62 3.91
29 30 6.429521 AAGTAGTGGGACTAAAACTTGCTA 57.570 37.500 0.00 0.00 31.62 3.49
30 31 5.791666 AGTAGTGGGACTAAAACTTGCTAC 58.208 41.667 0.00 0.00 31.62 3.58
31 32 4.017177 AGTGGGACTAAAACTTGCTACC 57.983 45.455 0.00 0.00 0.00 3.18
32 33 3.079578 GTGGGACTAAAACTTGCTACCC 58.920 50.000 0.00 0.00 36.92 3.69
33 34 2.040679 TGGGACTAAAACTTGCTACCCC 59.959 50.000 0.00 0.00 35.69 4.95
34 35 2.619849 GGGACTAAAACTTGCTACCCCC 60.620 54.545 0.00 0.00 0.00 5.40
35 36 2.040679 GGACTAAAACTTGCTACCCCCA 59.959 50.000 0.00 0.00 0.00 4.96
36 37 3.308904 GGACTAAAACTTGCTACCCCCAT 60.309 47.826 0.00 0.00 0.00 4.00
37 38 3.945921 GACTAAAACTTGCTACCCCCATC 59.054 47.826 0.00 0.00 0.00 3.51
38 39 2.231716 AAAACTTGCTACCCCCATCC 57.768 50.000 0.00 0.00 0.00 3.51
39 40 1.080638 AAACTTGCTACCCCCATCCA 58.919 50.000 0.00 0.00 0.00 3.41
40 41 1.308877 AACTTGCTACCCCCATCCAT 58.691 50.000 0.00 0.00 0.00 3.41
41 42 0.552848 ACTTGCTACCCCCATCCATG 59.447 55.000 0.00 0.00 0.00 3.66
42 43 0.825010 CTTGCTACCCCCATCCATGC 60.825 60.000 0.00 0.00 0.00 4.06
43 44 1.288508 TTGCTACCCCCATCCATGCT 61.289 55.000 0.00 0.00 0.00 3.79
44 45 1.288508 TGCTACCCCCATCCATGCTT 61.289 55.000 0.00 0.00 0.00 3.91
45 46 0.825010 GCTACCCCCATCCATGCTTG 60.825 60.000 0.00 0.00 0.00 4.01
46 47 0.846015 CTACCCCCATCCATGCTTGA 59.154 55.000 0.22 0.00 0.00 3.02
47 48 1.215173 CTACCCCCATCCATGCTTGAA 59.785 52.381 0.22 0.00 0.00 2.69
48 49 0.638292 ACCCCCATCCATGCTTGAAT 59.362 50.000 0.22 0.00 0.00 2.57
49 50 1.335145 CCCCCATCCATGCTTGAATC 58.665 55.000 0.22 0.00 0.00 2.52
50 51 1.335145 CCCCATCCATGCTTGAATCC 58.665 55.000 0.22 0.00 0.00 3.01
51 52 1.411930 CCCCATCCATGCTTGAATCCA 60.412 52.381 0.22 0.00 0.00 3.41
52 53 2.390696 CCCATCCATGCTTGAATCCAA 58.609 47.619 0.22 0.00 0.00 3.53
53 54 2.767394 CCCATCCATGCTTGAATCCAAA 59.233 45.455 0.22 0.00 0.00 3.28
54 55 3.389983 CCCATCCATGCTTGAATCCAAAT 59.610 43.478 0.22 0.00 0.00 2.32
55 56 4.589798 CCCATCCATGCTTGAATCCAAATA 59.410 41.667 0.22 0.00 0.00 1.40
56 57 5.247564 CCCATCCATGCTTGAATCCAAATAT 59.752 40.000 0.22 0.00 0.00 1.28
57 58 6.239772 CCCATCCATGCTTGAATCCAAATATT 60.240 38.462 0.22 0.00 0.00 1.28
58 59 7.038870 CCCATCCATGCTTGAATCCAAATATTA 60.039 37.037 0.22 0.00 0.00 0.98
59 60 8.369424 CCATCCATGCTTGAATCCAAATATTAA 58.631 33.333 0.22 0.00 0.00 1.40
60 61 9.767228 CATCCATGCTTGAATCCAAATATTAAA 57.233 29.630 0.22 0.00 0.00 1.52
61 62 9.991906 ATCCATGCTTGAATCCAAATATTAAAG 57.008 29.630 0.22 0.00 32.44 1.85
62 63 9.199645 TCCATGCTTGAATCCAAATATTAAAGA 57.800 29.630 0.22 0.00 31.31 2.52
63 64 9.472361 CCATGCTTGAATCCAAATATTAAAGAG 57.528 33.333 0.22 0.00 31.31 2.85
66 67 9.466497 TGCTTGAATCCAAATATTAAAGAGACT 57.534 29.630 0.00 0.00 31.31 3.24
85 86 9.507329 AAGAGACTAAAATCAAGTTAATGAGCA 57.493 29.630 0.00 0.00 31.76 4.26
86 87 9.678260 AGAGACTAAAATCAAGTTAATGAGCAT 57.322 29.630 0.00 0.00 31.76 3.79
104 105 7.346751 TGAGCATTTATTATCCTTCAAACCC 57.653 36.000 0.00 0.00 0.00 4.11
105 106 7.125391 TGAGCATTTATTATCCTTCAAACCCT 58.875 34.615 0.00 0.00 0.00 4.34
106 107 7.285401 TGAGCATTTATTATCCTTCAAACCCTC 59.715 37.037 0.00 0.00 0.00 4.30
107 108 6.551227 AGCATTTATTATCCTTCAAACCCTCC 59.449 38.462 0.00 0.00 0.00 4.30
108 109 6.323739 GCATTTATTATCCTTCAAACCCTCCA 59.676 38.462 0.00 0.00 0.00 3.86
109 110 7.147742 GCATTTATTATCCTTCAAACCCTCCAA 60.148 37.037 0.00 0.00 0.00 3.53
110 111 8.927411 CATTTATTATCCTTCAAACCCTCCAAT 58.073 33.333 0.00 0.00 0.00 3.16
111 112 8.533569 TTTATTATCCTTCAAACCCTCCAATC 57.466 34.615 0.00 0.00 0.00 2.67
112 113 2.899303 TCCTTCAAACCCTCCAATCC 57.101 50.000 0.00 0.00 0.00 3.01
113 114 2.069775 TCCTTCAAACCCTCCAATCCA 58.930 47.619 0.00 0.00 0.00 3.41
114 115 2.041620 TCCTTCAAACCCTCCAATCCAG 59.958 50.000 0.00 0.00 0.00 3.86
115 116 2.041620 CCTTCAAACCCTCCAATCCAGA 59.958 50.000 0.00 0.00 0.00 3.86
116 117 3.500289 CCTTCAAACCCTCCAATCCAGAA 60.500 47.826 0.00 0.00 0.00 3.02
117 118 3.154827 TCAAACCCTCCAATCCAGAAC 57.845 47.619 0.00 0.00 0.00 3.01
118 119 2.716424 TCAAACCCTCCAATCCAGAACT 59.284 45.455 0.00 0.00 0.00 3.01
119 120 3.084786 CAAACCCTCCAATCCAGAACTC 58.915 50.000 0.00 0.00 0.00 3.01
120 121 0.905357 ACCCTCCAATCCAGAACTCG 59.095 55.000 0.00 0.00 0.00 4.18
121 122 0.462759 CCCTCCAATCCAGAACTCGC 60.463 60.000 0.00 0.00 0.00 5.03
122 123 0.250234 CCTCCAATCCAGAACTCGCA 59.750 55.000 0.00 0.00 0.00 5.10
123 124 1.134280 CCTCCAATCCAGAACTCGCAT 60.134 52.381 0.00 0.00 0.00 4.73
124 125 1.938577 CTCCAATCCAGAACTCGCATG 59.061 52.381 0.00 0.00 0.00 4.06
125 126 1.278985 TCCAATCCAGAACTCGCATGT 59.721 47.619 0.00 0.00 0.00 3.21
126 127 1.399440 CCAATCCAGAACTCGCATGTG 59.601 52.381 0.00 0.00 0.00 3.21
127 128 2.079158 CAATCCAGAACTCGCATGTGT 58.921 47.619 6.09 0.00 0.00 3.72
128 129 2.479566 ATCCAGAACTCGCATGTGTT 57.520 45.000 6.09 3.50 34.68 3.32
129 130 3.610040 ATCCAGAACTCGCATGTGTTA 57.390 42.857 6.09 0.00 32.29 2.41
130 131 3.394674 TCCAGAACTCGCATGTGTTAA 57.605 42.857 6.09 0.00 32.29 2.01
131 132 3.734463 TCCAGAACTCGCATGTGTTAAA 58.266 40.909 6.09 0.00 32.29 1.52
132 133 3.745975 TCCAGAACTCGCATGTGTTAAAG 59.254 43.478 6.09 0.00 32.29 1.85
133 134 3.120199 CCAGAACTCGCATGTGTTAAAGG 60.120 47.826 6.09 0.00 32.29 3.11
134 135 3.745975 CAGAACTCGCATGTGTTAAAGGA 59.254 43.478 6.09 0.00 32.29 3.36
135 136 3.997021 AGAACTCGCATGTGTTAAAGGAG 59.003 43.478 6.09 0.00 32.29 3.69
136 137 3.678056 ACTCGCATGTGTTAAAGGAGA 57.322 42.857 6.09 0.00 0.00 3.71
137 138 3.589988 ACTCGCATGTGTTAAAGGAGAG 58.410 45.455 6.09 0.00 0.00 3.20
138 139 2.932614 CTCGCATGTGTTAAAGGAGAGG 59.067 50.000 6.09 0.00 0.00 3.69
139 140 2.565391 TCGCATGTGTTAAAGGAGAGGA 59.435 45.455 6.09 0.00 0.00 3.71
140 141 2.932614 CGCATGTGTTAAAGGAGAGGAG 59.067 50.000 0.00 0.00 0.00 3.69
141 142 3.617531 CGCATGTGTTAAAGGAGAGGAGT 60.618 47.826 0.00 0.00 0.00 3.85
142 143 4.327680 GCATGTGTTAAAGGAGAGGAGTT 58.672 43.478 0.00 0.00 0.00 3.01
143 144 5.488341 GCATGTGTTAAAGGAGAGGAGTTA 58.512 41.667 0.00 0.00 0.00 2.24
144 145 5.938125 GCATGTGTTAAAGGAGAGGAGTTAA 59.062 40.000 0.00 0.00 0.00 2.01
145 146 6.430000 GCATGTGTTAAAGGAGAGGAGTTAAA 59.570 38.462 0.00 0.00 0.00 1.52
146 147 7.121315 GCATGTGTTAAAGGAGAGGAGTTAAAT 59.879 37.037 0.00 0.00 0.00 1.40
147 148 7.979444 TGTGTTAAAGGAGAGGAGTTAAATG 57.021 36.000 0.00 0.00 0.00 2.32
148 149 7.741785 TGTGTTAAAGGAGAGGAGTTAAATGA 58.258 34.615 0.00 0.00 0.00 2.57
149 150 7.878127 TGTGTTAAAGGAGAGGAGTTAAATGAG 59.122 37.037 0.00 0.00 0.00 2.90
150 151 8.095169 GTGTTAAAGGAGAGGAGTTAAATGAGA 58.905 37.037 0.00 0.00 0.00 3.27
151 152 8.656806 TGTTAAAGGAGAGGAGTTAAATGAGAA 58.343 33.333 0.00 0.00 0.00 2.87
152 153 9.157104 GTTAAAGGAGAGGAGTTAAATGAGAAG 57.843 37.037 0.00 0.00 0.00 2.85
153 154 7.560796 AAAGGAGAGGAGTTAAATGAGAAGA 57.439 36.000 0.00 0.00 0.00 2.87
154 155 6.790232 AGGAGAGGAGTTAAATGAGAAGAG 57.210 41.667 0.00 0.00 0.00 2.85
155 156 6.498538 AGGAGAGGAGTTAAATGAGAAGAGA 58.501 40.000 0.00 0.00 0.00 3.10
156 157 6.607198 AGGAGAGGAGTTAAATGAGAAGAGAG 59.393 42.308 0.00 0.00 0.00 3.20
157 158 6.605594 GGAGAGGAGTTAAATGAGAAGAGAGA 59.394 42.308 0.00 0.00 0.00 3.10
158 159 7.201821 GGAGAGGAGTTAAATGAGAAGAGAGAG 60.202 44.444 0.00 0.00 0.00 3.20
159 160 6.607198 AGAGGAGTTAAATGAGAAGAGAGAGG 59.393 42.308 0.00 0.00 0.00 3.69
160 161 6.498538 AGGAGTTAAATGAGAAGAGAGAGGA 58.501 40.000 0.00 0.00 0.00 3.71
161 162 6.379988 AGGAGTTAAATGAGAAGAGAGAGGAC 59.620 42.308 0.00 0.00 0.00 3.85
162 163 6.379988 GGAGTTAAATGAGAAGAGAGAGGACT 59.620 42.308 0.00 0.00 0.00 3.85
163 164 7.558444 GGAGTTAAATGAGAAGAGAGAGGACTA 59.442 40.741 0.00 0.00 0.00 2.59
164 165 8.887264 AGTTAAATGAGAAGAGAGAGGACTAA 57.113 34.615 0.00 0.00 0.00 2.24
165 166 9.487442 AGTTAAATGAGAAGAGAGAGGACTAAT 57.513 33.333 0.00 0.00 0.00 1.73
166 167 9.744468 GTTAAATGAGAAGAGAGAGGACTAATC 57.256 37.037 0.00 0.00 0.00 1.75
167 168 6.976934 AATGAGAAGAGAGAGGACTAATCC 57.023 41.667 0.00 0.00 46.69 3.01
182 183 6.296803 GGACTAATCCACATTTTAGTAGGGG 58.703 44.000 0.00 0.00 45.47 4.79
183 184 6.126565 GGACTAATCCACATTTTAGTAGGGGT 60.127 42.308 0.00 0.00 45.47 4.95
184 185 7.071572 GGACTAATCCACATTTTAGTAGGGGTA 59.928 40.741 0.00 0.00 45.47 3.69
185 186 7.799081 ACTAATCCACATTTTAGTAGGGGTAC 58.201 38.462 0.00 0.00 36.99 3.34
186 187 7.147426 ACTAATCCACATTTTAGTAGGGGTACC 60.147 40.741 2.17 2.17 41.38 3.34
227 228 4.505808 GTCTCAAGACTAGTTTTAGCCCC 58.494 47.826 0.00 0.00 41.65 5.80
228 229 4.223255 GTCTCAAGACTAGTTTTAGCCCCT 59.777 45.833 0.00 0.00 41.65 4.79
229 230 4.466726 TCTCAAGACTAGTTTTAGCCCCTC 59.533 45.833 0.00 0.00 0.00 4.30
230 231 4.426704 TCAAGACTAGTTTTAGCCCCTCT 58.573 43.478 0.00 0.00 0.00 3.69
231 232 4.844655 TCAAGACTAGTTTTAGCCCCTCTT 59.155 41.667 0.00 0.00 0.00 2.85
232 233 5.309806 TCAAGACTAGTTTTAGCCCCTCTTT 59.690 40.000 0.00 0.00 0.00 2.52
233 234 6.499350 TCAAGACTAGTTTTAGCCCCTCTTTA 59.501 38.462 0.00 0.00 0.00 1.85
234 235 6.547930 AGACTAGTTTTAGCCCCTCTTTAG 57.452 41.667 0.00 0.00 0.00 1.85
235 236 6.024247 AGACTAGTTTTAGCCCCTCTTTAGT 58.976 40.000 0.00 0.00 0.00 2.24
236 237 6.051179 ACTAGTTTTAGCCCCTCTTTAGTG 57.949 41.667 0.00 0.00 0.00 2.74
237 238 5.783875 ACTAGTTTTAGCCCCTCTTTAGTGA 59.216 40.000 0.00 0.00 0.00 3.41
238 239 5.167303 AGTTTTAGCCCCTCTTTAGTGAG 57.833 43.478 0.00 0.00 0.00 3.51
248 249 4.478206 CTCTTTAGTGAGGGATGCTTGA 57.522 45.455 0.00 0.00 0.00 3.02
249 250 4.836825 CTCTTTAGTGAGGGATGCTTGAA 58.163 43.478 0.00 0.00 0.00 2.69
250 251 5.241403 TCTTTAGTGAGGGATGCTTGAAA 57.759 39.130 0.00 0.00 0.00 2.69
251 252 5.003804 TCTTTAGTGAGGGATGCTTGAAAC 58.996 41.667 0.00 0.00 0.00 2.78
252 253 4.640771 TTAGTGAGGGATGCTTGAAACT 57.359 40.909 0.00 0.00 0.00 2.66
253 254 3.515602 AGTGAGGGATGCTTGAAACTT 57.484 42.857 0.00 0.00 0.00 2.66
254 255 3.837355 AGTGAGGGATGCTTGAAACTTT 58.163 40.909 0.00 0.00 0.00 2.66
255 256 4.985538 AGTGAGGGATGCTTGAAACTTTA 58.014 39.130 0.00 0.00 0.00 1.85
256 257 5.006386 AGTGAGGGATGCTTGAAACTTTAG 58.994 41.667 0.00 0.00 0.00 1.85
257 258 3.758554 TGAGGGATGCTTGAAACTTTAGC 59.241 43.478 0.00 0.00 35.50 3.09
258 259 3.092301 AGGGATGCTTGAAACTTTAGCC 58.908 45.455 0.00 0.00 34.03 3.93
259 260 3.092301 GGGATGCTTGAAACTTTAGCCT 58.908 45.455 0.00 0.00 34.03 4.58
260 261 3.129462 GGGATGCTTGAAACTTTAGCCTC 59.871 47.826 0.00 0.00 34.03 4.70
261 262 4.013050 GGATGCTTGAAACTTTAGCCTCT 58.987 43.478 0.00 0.00 34.03 3.69
262 263 4.460731 GGATGCTTGAAACTTTAGCCTCTT 59.539 41.667 0.00 0.00 34.03 2.85
263 264 5.648092 GGATGCTTGAAACTTTAGCCTCTTA 59.352 40.000 0.00 0.00 34.03 2.10
264 265 6.151144 GGATGCTTGAAACTTTAGCCTCTTAA 59.849 38.462 0.00 0.00 34.03 1.85
265 266 6.952773 TGCTTGAAACTTTAGCCTCTTAAA 57.047 33.333 0.00 0.00 34.03 1.52
266 267 7.341445 TGCTTGAAACTTTAGCCTCTTAAAA 57.659 32.000 0.00 0.00 34.03 1.52
267 268 7.951591 TGCTTGAAACTTTAGCCTCTTAAAAT 58.048 30.769 0.00 0.00 34.03 1.82
268 269 7.867403 TGCTTGAAACTTTAGCCTCTTAAAATG 59.133 33.333 0.00 0.00 34.03 2.32
269 270 8.082242 GCTTGAAACTTTAGCCTCTTAAAATGA 58.918 33.333 0.00 0.00 0.00 2.57
270 271 9.399403 CTTGAAACTTTAGCCTCTTAAAATGAC 57.601 33.333 0.00 0.00 0.00 3.06
271 272 8.691661 TGAAACTTTAGCCTCTTAAAATGACT 57.308 30.769 0.00 0.00 0.00 3.41
272 273 9.787435 TGAAACTTTAGCCTCTTAAAATGACTA 57.213 29.630 0.00 0.00 0.00 2.59
310 311 9.825109 ACTAAAATAAGTCTCTTAGATCCAAGC 57.175 33.333 0.00 0.00 0.00 4.01
311 312 9.823647 CTAAAATAAGTCTCTTAGATCCAAGCA 57.176 33.333 0.00 0.00 0.00 3.91
312 313 8.499403 AAAATAAGTCTCTTAGATCCAAGCAC 57.501 34.615 0.00 0.00 0.00 4.40
313 314 4.479786 AAGTCTCTTAGATCCAAGCACC 57.520 45.455 0.00 0.00 0.00 5.01
314 315 2.769095 AGTCTCTTAGATCCAAGCACCC 59.231 50.000 0.00 0.00 0.00 4.61
315 316 2.769095 GTCTCTTAGATCCAAGCACCCT 59.231 50.000 0.00 0.00 0.00 4.34
316 317 3.198853 GTCTCTTAGATCCAAGCACCCTT 59.801 47.826 0.00 0.00 0.00 3.95
457 459 8.587950 TGAATGAACGTGTGAATTAACAAAAAC 58.412 29.630 0.00 0.00 0.00 2.43
461 619 7.381408 TGAACGTGTGAATTAACAAAAACAACA 59.619 29.630 0.00 0.00 0.00 3.33
472 630 6.423776 AACAAAAACAACATCTCATCCCAT 57.576 33.333 0.00 0.00 0.00 4.00
479 637 4.194640 CAACATCTCATCCCATCGAAAGT 58.805 43.478 0.00 0.00 0.00 2.66
493 651 2.097104 TCGAAAGTGCATCGACGAAAAC 60.097 45.455 6.79 0.49 43.76 2.43
524 682 9.831737 AAATATATTCAGAAATAATGCGAGCAC 57.168 29.630 0.00 0.00 31.28 4.40
550 708 3.602483 GATTTAAACCGTAGTGGGCTGA 58.398 45.455 0.00 0.00 44.64 4.26
704 868 9.774742 ATACTTCAAAATTTCTAATGAACGAGC 57.225 29.630 0.00 0.00 31.02 5.03
713 877 7.591006 TTTCTAATGAACGAGCGAATTAACT 57.409 32.000 0.00 0.00 31.02 2.24
1364 1546 2.434185 GATGCTTGACGTGGCGGA 60.434 61.111 0.00 0.00 0.00 5.54
1410 1592 4.553101 CGCGCGCGTTACATGTCC 62.553 66.667 42.49 10.04 34.35 4.02
1506 1688 2.263852 CTCAAGCTCTCCTGCGCA 59.736 61.111 10.98 10.98 38.13 6.09
1710 1892 3.118629 ACATGATGACGGTGAACTGCTAT 60.119 43.478 0.00 0.00 0.00 2.97
1782 1964 2.743928 GGCTTCCTGACGCTGGTG 60.744 66.667 0.00 0.00 0.00 4.17
1818 2000 0.995675 AGGGCCTCCAGGTTATGCAT 60.996 55.000 0.00 3.79 37.57 3.96
2107 2294 3.056821 CAGGGTCACGATCTAGTCAAACA 60.057 47.826 0.00 0.00 0.00 2.83
2205 3919 6.097356 TGTGATCGGAAGACACTGTTTATAC 58.903 40.000 12.07 0.00 46.97 1.47
2470 4186 0.760567 AGCTGAGACACACCTCCACA 60.761 55.000 0.00 0.00 32.32 4.17
2495 4211 3.121030 GCGTCCGCTTCACATGCT 61.121 61.111 4.10 0.00 38.26 3.79
2496 4212 1.809619 GCGTCCGCTTCACATGCTA 60.810 57.895 4.10 0.00 38.26 3.49
2609 4331 5.145513 AGGGTCAGCCTAGTCTTAAGTAT 57.854 43.478 0.00 0.00 34.45 2.12
2680 4403 6.741992 CATTGAACAAATGGCTACAGTAGA 57.258 37.500 12.15 0.00 41.80 2.59
2681 4404 7.325660 CATTGAACAAATGGCTACAGTAGAT 57.674 36.000 12.15 0.00 41.80 1.98
2682 4405 6.985188 TTGAACAAATGGCTACAGTAGATC 57.015 37.500 12.15 3.36 0.00 2.75
2683 4406 5.109210 TGAACAAATGGCTACAGTAGATCG 58.891 41.667 12.15 0.00 0.00 3.69
2684 4407 3.458189 ACAAATGGCTACAGTAGATCGC 58.542 45.455 12.15 0.00 0.00 4.58
2685 4408 3.118775 ACAAATGGCTACAGTAGATCGCA 60.119 43.478 12.15 0.00 0.00 5.10
2686 4409 3.819564 AATGGCTACAGTAGATCGCAA 57.180 42.857 12.15 0.00 0.00 4.85
2687 4410 3.819564 ATGGCTACAGTAGATCGCAAA 57.180 42.857 12.15 0.00 0.00 3.68
2688 4411 3.603158 TGGCTACAGTAGATCGCAAAA 57.397 42.857 12.15 0.00 0.00 2.44
2689 4412 3.932822 TGGCTACAGTAGATCGCAAAAA 58.067 40.909 12.15 0.00 0.00 1.94
2824 4547 3.642778 CTCGGTGGCGTCGTTCCAT 62.643 63.158 0.00 0.00 35.81 3.41
3007 4730 1.592400 CCTTCGGCTGACGTCCACTA 61.592 60.000 14.12 0.00 44.69 2.74
3023 4746 4.274459 GTCCACTATTGATGCCTCAACATC 59.726 45.833 6.57 0.00 43.92 3.06
3052 4775 0.605050 TGACCTTTGCGTGCATGCTA 60.605 50.000 29.83 21.15 35.36 3.49
3180 4903 3.827008 ATGTGGCATCGAAGATGTACT 57.173 42.857 11.12 0.00 45.12 2.73
3227 5392 8.318412 TCTGCTTATCTACATGTTAGTTTGGAA 58.682 33.333 2.30 0.00 0.00 3.53
3234 5399 3.739300 ACATGTTAGTTTGGAACGAGTCG 59.261 43.478 11.85 11.85 36.23 4.18
3645 5810 1.953686 CACCCACCCCGCAAAATATAG 59.046 52.381 0.00 0.00 0.00 1.31
3648 5813 2.650322 CCACCCCGCAAAATATAGTGT 58.350 47.619 0.00 0.00 0.00 3.55
3721 5886 5.763698 ACTCATGATCAAATATCCAGTGCAG 59.236 40.000 0.00 0.00 0.00 4.41
3722 5887 5.067954 TCATGATCAAATATCCAGTGCAGG 58.932 41.667 0.00 0.00 0.00 4.85
3723 5888 4.508551 TGATCAAATATCCAGTGCAGGT 57.491 40.909 0.00 0.00 0.00 4.00
3724 5889 5.628797 TGATCAAATATCCAGTGCAGGTA 57.371 39.130 0.00 0.00 0.00 3.08
3725 5890 6.191657 TGATCAAATATCCAGTGCAGGTAT 57.808 37.500 0.00 0.00 0.00 2.73
3726 5891 6.233434 TGATCAAATATCCAGTGCAGGTATC 58.767 40.000 0.00 0.00 0.00 2.24
3727 5892 4.973168 TCAAATATCCAGTGCAGGTATCC 58.027 43.478 0.00 0.00 0.00 2.59
3728 5893 4.660303 TCAAATATCCAGTGCAGGTATCCT 59.340 41.667 0.00 0.00 0.00 3.24
3729 5894 4.899352 AATATCCAGTGCAGGTATCCTC 57.101 45.455 0.00 0.00 0.00 3.71
3730 5895 1.428869 ATCCAGTGCAGGTATCCTCC 58.571 55.000 0.00 0.00 0.00 4.30
3731 5896 0.042581 TCCAGTGCAGGTATCCTCCA 59.957 55.000 0.00 0.00 0.00 3.86
3732 5897 1.135094 CCAGTGCAGGTATCCTCCAT 58.865 55.000 0.00 0.00 0.00 3.41
3733 5898 1.202734 CCAGTGCAGGTATCCTCCATG 60.203 57.143 0.00 0.00 0.00 3.66
3734 5899 1.135094 AGTGCAGGTATCCTCCATGG 58.865 55.000 4.97 4.97 37.10 3.66
3735 5900 0.839946 GTGCAGGTATCCTCCATGGT 59.160 55.000 12.58 0.00 37.07 3.55
3736 5901 0.839277 TGCAGGTATCCTCCATGGTG 59.161 55.000 12.58 9.53 37.07 4.17
3737 5902 0.109342 GCAGGTATCCTCCATGGTGG 59.891 60.000 24.44 24.44 39.43 4.61
3738 5903 1.511613 CAGGTATCCTCCATGGTGGT 58.488 55.000 27.90 18.87 39.03 4.16
3739 5904 1.141657 CAGGTATCCTCCATGGTGGTG 59.858 57.143 27.90 16.87 39.03 4.17
3740 5905 1.009552 AGGTATCCTCCATGGTGGTGA 59.990 52.381 27.90 16.49 39.03 4.02
3741 5906 1.843851 GGTATCCTCCATGGTGGTGAA 59.156 52.381 27.90 13.03 39.03 3.18
3742 5907 2.158755 GGTATCCTCCATGGTGGTGAAG 60.159 54.545 27.90 10.44 39.03 3.02
3743 5908 0.257039 ATCCTCCATGGTGGTGAAGC 59.743 55.000 27.90 0.00 39.03 3.86
3744 5909 1.379044 CCTCCATGGTGGTGAAGCC 60.379 63.158 22.53 0.00 39.03 4.35
3745 5910 1.746615 CTCCATGGTGGTGAAGCCG 60.747 63.158 12.58 0.00 39.03 5.52
3746 5911 2.034066 CCATGGTGGTGAAGCCGT 59.966 61.111 2.57 0.00 41.21 5.68
3747 5912 2.040544 CCATGGTGGTGAAGCCGTC 61.041 63.158 2.57 0.00 41.21 4.79
3748 5913 2.047274 ATGGTGGTGAAGCCGTCG 60.047 61.111 0.00 0.00 41.21 5.12
3749 5914 2.879233 ATGGTGGTGAAGCCGTCGT 61.879 57.895 0.00 0.00 41.21 4.34
3750 5915 2.737376 GGTGGTGAAGCCGTCGTC 60.737 66.667 0.00 0.00 41.21 4.20
3751 5916 3.103911 GTGGTGAAGCCGTCGTCG 61.104 66.667 0.00 0.00 41.21 5.12
3752 5917 3.289062 TGGTGAAGCCGTCGTCGA 61.289 61.111 2.98 0.00 41.21 4.20
3753 5918 2.504244 GGTGAAGCCGTCGTCGAG 60.504 66.667 2.98 0.00 39.71 4.04
3754 5919 2.504244 GTGAAGCCGTCGTCGAGG 60.504 66.667 7.96 7.96 39.71 4.63
3761 5926 4.394078 CGTCGTCGAGGCGTTGGA 62.394 66.667 1.48 0.00 44.05 3.53
3762 5927 2.804090 GTCGTCGAGGCGTTGGAC 60.804 66.667 0.00 0.00 0.00 4.02
3763 5928 4.047059 TCGTCGAGGCGTTGGACC 62.047 66.667 0.00 0.00 31.43 4.46
3772 5937 4.368808 CGTTGGACCGCGCACTTG 62.369 66.667 8.75 0.00 0.00 3.16
3773 5938 4.683334 GTTGGACCGCGCACTTGC 62.683 66.667 8.75 0.00 37.78 4.01
3793 5958 4.394712 CCCACGAGCTGGTCCACC 62.395 72.222 0.00 0.00 38.60 4.61
3794 5959 3.625897 CCACGAGCTGGTCCACCA 61.626 66.667 0.00 0.00 45.30 4.17
3795 5960 2.357517 CACGAGCTGGTCCACCAC 60.358 66.667 0.00 0.00 42.01 4.16
3796 5961 2.524394 ACGAGCTGGTCCACCACT 60.524 61.111 0.00 0.00 42.01 4.00
3797 5962 2.140792 ACGAGCTGGTCCACCACTT 61.141 57.895 0.00 0.00 42.01 3.16
3798 5963 1.374758 CGAGCTGGTCCACCACTTC 60.375 63.158 0.00 0.00 42.01 3.01
3799 5964 1.003233 GAGCTGGTCCACCACTTCC 60.003 63.158 0.00 0.00 42.01 3.46
3800 5965 2.358737 GCTGGTCCACCACTTCCG 60.359 66.667 0.00 0.00 42.01 4.30
3801 5966 2.347490 CTGGTCCACCACTTCCGG 59.653 66.667 0.00 0.00 42.01 5.14
3802 5967 3.901797 CTGGTCCACCACTTCCGGC 62.902 68.421 0.00 0.00 42.01 6.13
3803 5968 4.717313 GGTCCACCACTTCCGGCC 62.717 72.222 0.00 0.00 35.64 6.13
3804 5969 3.637273 GTCCACCACTTCCGGCCT 61.637 66.667 0.00 0.00 0.00 5.19
3805 5970 3.319198 TCCACCACTTCCGGCCTC 61.319 66.667 0.00 0.00 0.00 4.70
3806 5971 4.410400 CCACCACTTCCGGCCTCC 62.410 72.222 0.00 0.00 0.00 4.30
3807 5972 3.636231 CACCACTTCCGGCCTCCA 61.636 66.667 0.00 0.00 0.00 3.86
3808 5973 2.852075 ACCACTTCCGGCCTCCAA 60.852 61.111 0.00 0.00 0.00 3.53
3809 5974 2.045926 CCACTTCCGGCCTCCAAG 60.046 66.667 0.00 2.17 0.00 3.61
3810 5975 2.747855 CACTTCCGGCCTCCAAGC 60.748 66.667 0.00 0.00 0.00 4.01
3811 5976 4.394712 ACTTCCGGCCTCCAAGCG 62.395 66.667 0.00 0.00 0.00 4.68
3812 5977 4.082523 CTTCCGGCCTCCAAGCGA 62.083 66.667 0.00 0.00 0.00 4.93
3813 5978 3.605749 CTTCCGGCCTCCAAGCGAA 62.606 63.158 0.00 0.00 0.00 4.70
3814 5979 3.185299 TTCCGGCCTCCAAGCGAAA 62.185 57.895 0.00 0.00 0.00 3.46
3815 5980 3.127533 CCGGCCTCCAAGCGAAAG 61.128 66.667 0.00 0.00 0.00 2.62
3816 5981 3.127533 CGGCCTCCAAGCGAAAGG 61.128 66.667 0.00 0.00 0.00 3.11
3817 5982 2.351276 GGCCTCCAAGCGAAAGGA 59.649 61.111 0.00 0.00 31.44 3.36
3820 5985 4.625800 CTCCAAGCGAAAGGAGGG 57.374 61.111 8.98 0.00 46.11 4.30
3821 5986 1.983224 CTCCAAGCGAAAGGAGGGA 59.017 57.895 8.98 0.00 46.11 4.20
3822 5987 0.107945 CTCCAAGCGAAAGGAGGGAG 60.108 60.000 8.98 0.00 46.11 4.30
3823 5988 1.078143 CCAAGCGAAAGGAGGGAGG 60.078 63.158 0.00 0.00 0.00 4.30
3824 5989 1.746991 CAAGCGAAAGGAGGGAGGC 60.747 63.158 0.00 0.00 0.00 4.70
3825 5990 2.972819 AAGCGAAAGGAGGGAGGCC 61.973 63.158 0.00 0.00 0.00 5.19
3826 5991 4.840005 GCGAAAGGAGGGAGGCCG 62.840 72.222 0.00 0.00 0.00 6.13
3827 5992 3.391382 CGAAAGGAGGGAGGCCGT 61.391 66.667 0.00 0.00 0.00 5.68
3828 5993 2.585153 GAAAGGAGGGAGGCCGTC 59.415 66.667 0.00 0.00 37.65 4.79
3829 5994 1.990614 GAAAGGAGGGAGGCCGTCT 60.991 63.158 0.00 0.00 38.35 4.18
3830 5995 0.686769 GAAAGGAGGGAGGCCGTCTA 60.687 60.000 0.00 0.00 38.35 2.59
3831 5996 0.976590 AAAGGAGGGAGGCCGTCTAC 60.977 60.000 0.00 0.00 38.35 2.59
3832 5997 3.217743 GGAGGGAGGCCGTCTACG 61.218 72.222 0.00 0.00 38.35 3.51
3833 5998 2.124403 GAGGGAGGCCGTCTACGA 60.124 66.667 3.65 0.00 43.02 3.43
3834 5999 2.439883 AGGGAGGCCGTCTACGAC 60.440 66.667 3.65 0.00 43.02 4.34
3835 6000 3.525545 GGGAGGCCGTCTACGACC 61.526 72.222 3.65 1.23 42.45 4.79
3836 6001 2.753043 GGAGGCCGTCTACGACCA 60.753 66.667 10.51 0.00 44.65 4.02
3837 6002 2.488820 GAGGCCGTCTACGACCAC 59.511 66.667 10.51 0.00 44.65 4.16
3838 6003 3.392595 GAGGCCGTCTACGACCACG 62.393 68.421 10.51 0.00 44.65 4.94
3849 6014 4.651008 GACCACGTGGACGCGGAA 62.651 66.667 40.21 0.00 43.71 4.30
3850 6015 4.657824 ACCACGTGGACGCGGAAG 62.658 66.667 40.21 11.37 43.71 3.46
3851 6016 4.657824 CCACGTGGACGCGGAAGT 62.658 66.667 31.31 0.00 43.71 3.01
3860 6025 4.796231 CGCGGAAGTGGAGGTCGG 62.796 72.222 0.00 0.00 38.12 4.79
3862 6027 4.796231 CGGAAGTGGAGGTCGGCG 62.796 72.222 0.00 0.00 0.00 6.46
3863 6028 3.692406 GGAAGTGGAGGTCGGCGT 61.692 66.667 6.85 0.00 0.00 5.68
3864 6029 2.342648 GAAGTGGAGGTCGGCGTT 59.657 61.111 6.85 0.00 0.00 4.84
3865 6030 2.027625 GAAGTGGAGGTCGGCGTTG 61.028 63.158 6.85 0.00 0.00 4.10
3866 6031 2.710724 GAAGTGGAGGTCGGCGTTGT 62.711 60.000 6.85 0.00 0.00 3.32
3867 6032 1.466025 AAGTGGAGGTCGGCGTTGTA 61.466 55.000 6.85 0.00 0.00 2.41
3868 6033 1.445582 GTGGAGGTCGGCGTTGTAG 60.446 63.158 6.85 0.00 0.00 2.74
3869 6034 2.183555 GGAGGTCGGCGTTGTAGG 59.816 66.667 6.85 0.00 0.00 3.18
3870 6035 2.508663 GAGGTCGGCGTTGTAGGC 60.509 66.667 6.85 0.00 0.00 3.93
3876 6041 2.260434 GGCGTTGTAGGCGTGAGA 59.740 61.111 0.00 0.00 0.00 3.27
3877 6042 1.805945 GGCGTTGTAGGCGTGAGAG 60.806 63.158 0.00 0.00 0.00 3.20
3878 6043 1.211969 GCGTTGTAGGCGTGAGAGA 59.788 57.895 0.00 0.00 0.00 3.10
3879 6044 1.071567 GCGTTGTAGGCGTGAGAGAC 61.072 60.000 0.00 0.00 0.00 3.36
3904 6069 2.819595 CACGGCCGGAAGTGGATG 60.820 66.667 31.76 12.25 34.93 3.51
3905 6070 3.319198 ACGGCCGGAAGTGGATGT 61.319 61.111 31.76 0.00 0.00 3.06
3906 6071 2.511600 CGGCCGGAAGTGGATGTC 60.512 66.667 20.10 0.00 0.00 3.06
3907 6072 2.511600 GGCCGGAAGTGGATGTCG 60.512 66.667 5.05 0.00 0.00 4.35
3908 6073 2.577059 GCCGGAAGTGGATGTCGA 59.423 61.111 5.05 0.00 0.00 4.20
3909 6074 1.519455 GCCGGAAGTGGATGTCGAG 60.519 63.158 5.05 0.00 0.00 4.04
3910 6075 1.141881 CCGGAAGTGGATGTCGAGG 59.858 63.158 0.00 0.00 0.00 4.63
3911 6076 1.519455 CGGAAGTGGATGTCGAGGC 60.519 63.158 0.00 0.00 0.00 4.70
3912 6077 1.153349 GGAAGTGGATGTCGAGGCC 60.153 63.158 0.00 0.00 0.00 5.19
3913 6078 1.519455 GAAGTGGATGTCGAGGCCG 60.519 63.158 0.00 0.00 37.07 6.13
3914 6079 2.227089 GAAGTGGATGTCGAGGCCGT 62.227 60.000 0.00 0.00 37.05 5.68
3915 6080 2.202756 GTGGATGTCGAGGCCGTC 60.203 66.667 0.00 0.00 37.05 4.79
3924 6089 2.261671 GAGGCCGTCGAGCTTGAA 59.738 61.111 4.86 0.00 0.00 2.69
3925 6090 1.807573 GAGGCCGTCGAGCTTGAAG 60.808 63.158 4.86 7.66 0.00 3.02
3926 6091 2.048127 GGCCGTCGAGCTTGAAGT 60.048 61.111 14.79 0.00 0.00 3.01
3927 6092 1.668151 GGCCGTCGAGCTTGAAGTT 60.668 57.895 14.79 0.00 0.00 2.66
3928 6093 1.493311 GCCGTCGAGCTTGAAGTTG 59.507 57.895 14.79 3.03 0.00 3.16
3929 6094 1.493311 CCGTCGAGCTTGAAGTTGC 59.507 57.895 14.79 0.00 0.00 4.17
3930 6095 1.221466 CCGTCGAGCTTGAAGTTGCA 61.221 55.000 14.79 0.00 0.00 4.08
3931 6096 0.581529 CGTCGAGCTTGAAGTTGCAA 59.418 50.000 4.86 0.00 0.00 4.08
3932 6097 1.657538 CGTCGAGCTTGAAGTTGCAAC 60.658 52.381 22.17 22.17 0.00 4.17
3933 6098 0.581529 TCGAGCTTGAAGTTGCAACG 59.418 50.000 23.21 10.26 34.61 4.10
3934 6099 0.993746 CGAGCTTGAAGTTGCAACGC 60.994 55.000 23.21 19.18 0.00 4.84
3935 6100 0.308993 GAGCTTGAAGTTGCAACGCT 59.691 50.000 23.32 23.32 36.04 5.07
3936 6101 0.308993 AGCTTGAAGTTGCAACGCTC 59.691 50.000 23.21 22.06 31.38 5.03
3937 6102 0.661483 GCTTGAAGTTGCAACGCTCC 60.661 55.000 23.21 13.76 0.00 4.70
3938 6103 0.384725 CTTGAAGTTGCAACGCTCCG 60.385 55.000 23.21 13.23 0.00 4.63
3939 6104 1.092921 TTGAAGTTGCAACGCTCCGT 61.093 50.000 23.21 2.21 43.97 4.69
3940 6105 0.249531 TGAAGTTGCAACGCTCCGTA 60.250 50.000 23.21 6.55 39.99 4.02
3941 6106 0.163146 GAAGTTGCAACGCTCCGTAC 59.837 55.000 23.21 6.74 39.99 3.67
3942 6107 1.554042 AAGTTGCAACGCTCCGTACG 61.554 55.000 23.21 8.69 39.99 3.67
3943 6108 3.408020 TTGCAACGCTCCGTACGC 61.408 61.111 10.49 0.00 39.99 4.42
3944 6109 4.649310 TGCAACGCTCCGTACGCA 62.649 61.111 10.49 9.70 42.84 5.24
3945 6110 3.186047 GCAACGCTCCGTACGCAT 61.186 61.111 10.49 0.00 39.99 4.73
3946 6111 2.695055 CAACGCTCCGTACGCATG 59.305 61.111 10.49 2.86 39.99 4.06
3947 6112 1.803922 CAACGCTCCGTACGCATGA 60.804 57.895 10.49 0.69 39.99 3.07
3948 6113 1.804326 AACGCTCCGTACGCATGAC 60.804 57.895 10.49 0.00 39.99 3.06
3949 6114 2.954868 CGCTCCGTACGCATGACC 60.955 66.667 10.49 0.00 0.00 4.02
3950 6115 2.494918 GCTCCGTACGCATGACCT 59.505 61.111 10.49 0.00 0.00 3.85
3951 6116 1.589196 GCTCCGTACGCATGACCTC 60.589 63.158 10.49 0.00 0.00 3.85
3952 6117 1.298413 CTCCGTACGCATGACCTCG 60.298 63.158 10.49 0.00 0.00 4.63
3953 6118 1.989966 CTCCGTACGCATGACCTCGT 61.990 60.000 10.49 0.00 42.09 4.18
3954 6119 1.585521 CCGTACGCATGACCTCGTC 60.586 63.158 10.49 0.00 39.79 4.20
3955 6120 1.933041 CGTACGCATGACCTCGTCG 60.933 63.158 0.52 0.00 39.79 5.12
3956 6121 2.101575 TACGCATGACCTCGTCGC 59.898 61.111 0.00 0.00 39.79 5.19
3957 6122 3.728267 TACGCATGACCTCGTCGCG 62.728 63.158 0.00 0.00 43.85 5.87
3960 6125 3.250323 CATGACCTCGTCGCGCAG 61.250 66.667 8.75 0.00 34.95 5.18
3975 6140 3.452786 CAGCTCGGCGGAGGAGAA 61.453 66.667 21.36 0.00 40.80 2.87
3976 6141 3.453679 AGCTCGGCGGAGGAGAAC 61.454 66.667 21.36 5.69 40.80 3.01
3977 6142 3.453679 GCTCGGCGGAGGAGAACT 61.454 66.667 21.36 0.00 40.80 3.01
3978 6143 3.007973 GCTCGGCGGAGGAGAACTT 62.008 63.158 21.36 0.00 40.80 2.66
3979 6144 1.139947 CTCGGCGGAGGAGAACTTC 59.860 63.158 13.25 0.00 36.61 3.01
3980 6145 1.595993 CTCGGCGGAGGAGAACTTCA 61.596 60.000 13.25 0.00 36.61 3.02
3981 6146 1.446272 CGGCGGAGGAGAACTTCAC 60.446 63.158 0.00 0.00 0.00 3.18
3982 6147 1.446272 GGCGGAGGAGAACTTCACG 60.446 63.158 0.00 0.00 0.00 4.35
3983 6148 1.585006 GCGGAGGAGAACTTCACGA 59.415 57.895 0.00 0.00 0.00 4.35
3984 6149 0.456995 GCGGAGGAGAACTTCACGAG 60.457 60.000 0.00 0.00 0.00 4.18
3985 6150 1.166129 CGGAGGAGAACTTCACGAGA 58.834 55.000 0.00 0.00 0.00 4.04
3986 6151 1.746220 CGGAGGAGAACTTCACGAGAT 59.254 52.381 0.00 0.00 0.00 2.75
3987 6152 2.943690 CGGAGGAGAACTTCACGAGATA 59.056 50.000 0.00 0.00 0.00 1.98
3988 6153 3.242804 CGGAGGAGAACTTCACGAGATAC 60.243 52.174 0.00 0.00 0.00 2.24
3989 6154 3.949113 GGAGGAGAACTTCACGAGATACT 59.051 47.826 0.00 0.00 0.00 2.12
3990 6155 4.201970 GGAGGAGAACTTCACGAGATACTG 60.202 50.000 0.00 0.00 0.00 2.74
3991 6156 3.129638 AGGAGAACTTCACGAGATACTGC 59.870 47.826 0.00 0.00 0.00 4.40
3992 6157 3.129638 GGAGAACTTCACGAGATACTGCT 59.870 47.826 0.00 0.00 0.00 4.24
3993 6158 4.347813 GAGAACTTCACGAGATACTGCTC 58.652 47.826 0.00 0.00 0.00 4.26
3994 6159 3.129638 AGAACTTCACGAGATACTGCTCC 59.870 47.826 0.00 0.00 0.00 4.70
3995 6160 1.402259 ACTTCACGAGATACTGCTCCG 59.598 52.381 0.00 0.00 0.00 4.63
3996 6161 0.738975 TTCACGAGATACTGCTCCGG 59.261 55.000 0.00 0.00 0.00 5.14
3997 6162 1.101635 TCACGAGATACTGCTCCGGG 61.102 60.000 0.00 0.00 0.00 5.73
3998 6163 1.101635 CACGAGATACTGCTCCGGGA 61.102 60.000 0.00 0.00 0.00 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.771766 CAAGTTTTAGTCCCACTACTTTTAGTC 58.228 37.037 0.00 0.00 36.31 2.59
1 2 7.228108 GCAAGTTTTAGTCCCACTACTTTTAGT 59.772 37.037 0.00 0.00 39.30 2.24
2 3 7.444487 AGCAAGTTTTAGTCCCACTACTTTTAG 59.556 37.037 0.00 0.00 28.93 1.85
3 4 7.284820 AGCAAGTTTTAGTCCCACTACTTTTA 58.715 34.615 0.00 0.00 28.93 1.52
4 5 6.127101 AGCAAGTTTTAGTCCCACTACTTTT 58.873 36.000 0.00 0.00 28.93 2.27
5 6 5.691896 AGCAAGTTTTAGTCCCACTACTTT 58.308 37.500 0.00 0.00 28.93 2.66
6 7 5.306114 AGCAAGTTTTAGTCCCACTACTT 57.694 39.130 0.00 0.00 28.93 2.24
7 8 4.976540 AGCAAGTTTTAGTCCCACTACT 57.023 40.909 0.00 0.00 28.93 2.57
8 9 4.934001 GGTAGCAAGTTTTAGTCCCACTAC 59.066 45.833 0.00 0.00 28.93 2.73
9 10 4.019950 GGGTAGCAAGTTTTAGTCCCACTA 60.020 45.833 0.00 0.00 34.39 2.74
10 11 3.244805 GGGTAGCAAGTTTTAGTCCCACT 60.245 47.826 0.00 0.00 34.39 4.00
11 12 3.079578 GGGTAGCAAGTTTTAGTCCCAC 58.920 50.000 0.00 0.00 34.39 4.61
12 13 2.040679 GGGGTAGCAAGTTTTAGTCCCA 59.959 50.000 0.00 0.00 35.77 4.37
13 14 2.619849 GGGGGTAGCAAGTTTTAGTCCC 60.620 54.545 0.00 0.00 0.00 4.46
14 15 2.040679 TGGGGGTAGCAAGTTTTAGTCC 59.959 50.000 0.00 0.00 0.00 3.85
15 16 3.428413 TGGGGGTAGCAAGTTTTAGTC 57.572 47.619 0.00 0.00 0.00 2.59
16 17 3.308904 GGATGGGGGTAGCAAGTTTTAGT 60.309 47.826 0.00 0.00 0.00 2.24
17 18 3.288092 GGATGGGGGTAGCAAGTTTTAG 58.712 50.000 0.00 0.00 0.00 1.85
18 19 2.650322 TGGATGGGGGTAGCAAGTTTTA 59.350 45.455 0.00 0.00 0.00 1.52
19 20 1.431243 TGGATGGGGGTAGCAAGTTTT 59.569 47.619 0.00 0.00 0.00 2.43
20 21 1.080638 TGGATGGGGGTAGCAAGTTT 58.919 50.000 0.00 0.00 0.00 2.66
21 22 1.063717 CATGGATGGGGGTAGCAAGTT 60.064 52.381 0.00 0.00 0.00 2.66
22 23 0.552848 CATGGATGGGGGTAGCAAGT 59.447 55.000 0.00 0.00 0.00 3.16
23 24 0.825010 GCATGGATGGGGGTAGCAAG 60.825 60.000 0.00 0.00 0.00 4.01
24 25 1.229927 GCATGGATGGGGGTAGCAA 59.770 57.895 0.00 0.00 0.00 3.91
25 26 1.288508 AAGCATGGATGGGGGTAGCA 61.289 55.000 0.00 0.00 0.00 3.49
26 27 0.825010 CAAGCATGGATGGGGGTAGC 60.825 60.000 0.00 0.00 0.00 3.58
27 28 0.846015 TCAAGCATGGATGGGGGTAG 59.154 55.000 0.00 0.00 0.00 3.18
28 29 1.303898 TTCAAGCATGGATGGGGGTA 58.696 50.000 0.00 0.00 0.00 3.69
29 30 0.638292 ATTCAAGCATGGATGGGGGT 59.362 50.000 0.00 0.00 0.00 4.95
30 31 1.335145 GATTCAAGCATGGATGGGGG 58.665 55.000 0.00 0.00 0.00 5.40
31 32 1.335145 GGATTCAAGCATGGATGGGG 58.665 55.000 0.00 0.00 0.00 4.96
32 33 2.076207 TGGATTCAAGCATGGATGGG 57.924 50.000 0.00 0.00 0.00 4.00
33 34 4.682778 ATTTGGATTCAAGCATGGATGG 57.317 40.909 0.00 0.00 33.98 3.51
34 35 9.767228 TTTAATATTTGGATTCAAGCATGGATG 57.233 29.630 0.00 0.00 33.98 3.51
35 36 9.991906 CTTTAATATTTGGATTCAAGCATGGAT 57.008 29.630 0.00 0.00 33.98 3.41
36 37 9.199645 TCTTTAATATTTGGATTCAAGCATGGA 57.800 29.630 0.00 0.00 33.98 3.41
37 38 9.472361 CTCTTTAATATTTGGATTCAAGCATGG 57.528 33.333 0.00 0.00 33.98 3.66
40 41 9.466497 AGTCTCTTTAATATTTGGATTCAAGCA 57.534 29.630 0.00 0.00 33.98 3.91
59 60 9.507329 TGCTCATTAACTTGATTTTAGTCTCTT 57.493 29.630 0.00 0.00 0.00 2.85
60 61 9.678260 ATGCTCATTAACTTGATTTTAGTCTCT 57.322 29.630 0.00 0.00 0.00 3.10
78 79 8.424133 GGGTTTGAAGGATAATAAATGCTCATT 58.576 33.333 0.00 0.00 0.00 2.57
79 80 7.786464 AGGGTTTGAAGGATAATAAATGCTCAT 59.214 33.333 0.00 0.00 0.00 2.90
80 81 7.125391 AGGGTTTGAAGGATAATAAATGCTCA 58.875 34.615 0.00 0.00 0.00 4.26
81 82 7.255625 GGAGGGTTTGAAGGATAATAAATGCTC 60.256 40.741 0.00 0.00 0.00 4.26
82 83 6.551227 GGAGGGTTTGAAGGATAATAAATGCT 59.449 38.462 0.00 0.00 0.00 3.79
83 84 6.323739 TGGAGGGTTTGAAGGATAATAAATGC 59.676 38.462 0.00 0.00 0.00 3.56
84 85 7.896383 TGGAGGGTTTGAAGGATAATAAATG 57.104 36.000 0.00 0.00 0.00 2.32
85 86 9.147732 GATTGGAGGGTTTGAAGGATAATAAAT 57.852 33.333 0.00 0.00 0.00 1.40
86 87 7.563556 GGATTGGAGGGTTTGAAGGATAATAAA 59.436 37.037 0.00 0.00 0.00 1.40
87 88 7.066781 GGATTGGAGGGTTTGAAGGATAATAA 58.933 38.462 0.00 0.00 0.00 1.40
88 89 6.161348 TGGATTGGAGGGTTTGAAGGATAATA 59.839 38.462 0.00 0.00 0.00 0.98
89 90 5.043432 TGGATTGGAGGGTTTGAAGGATAAT 60.043 40.000 0.00 0.00 0.00 1.28
90 91 4.293634 TGGATTGGAGGGTTTGAAGGATAA 59.706 41.667 0.00 0.00 0.00 1.75
91 92 3.855599 TGGATTGGAGGGTTTGAAGGATA 59.144 43.478 0.00 0.00 0.00 2.59
92 93 2.654385 TGGATTGGAGGGTTTGAAGGAT 59.346 45.455 0.00 0.00 0.00 3.24
93 94 2.041620 CTGGATTGGAGGGTTTGAAGGA 59.958 50.000 0.00 0.00 0.00 3.36
94 95 2.041620 TCTGGATTGGAGGGTTTGAAGG 59.958 50.000 0.00 0.00 0.00 3.46
95 96 3.439857 TCTGGATTGGAGGGTTTGAAG 57.560 47.619 0.00 0.00 0.00 3.02
96 97 3.140144 AGTTCTGGATTGGAGGGTTTGAA 59.860 43.478 0.00 0.00 0.00 2.69
97 98 2.716424 AGTTCTGGATTGGAGGGTTTGA 59.284 45.455 0.00 0.00 0.00 2.69
98 99 3.084786 GAGTTCTGGATTGGAGGGTTTG 58.915 50.000 0.00 0.00 0.00 2.93
99 100 2.290323 CGAGTTCTGGATTGGAGGGTTT 60.290 50.000 0.00 0.00 0.00 3.27
100 101 1.279271 CGAGTTCTGGATTGGAGGGTT 59.721 52.381 0.00 0.00 0.00 4.11
101 102 0.905357 CGAGTTCTGGATTGGAGGGT 59.095 55.000 0.00 0.00 0.00 4.34
102 103 0.462759 GCGAGTTCTGGATTGGAGGG 60.463 60.000 0.00 0.00 0.00 4.30
103 104 0.250234 TGCGAGTTCTGGATTGGAGG 59.750 55.000 0.00 0.00 0.00 4.30
104 105 1.938577 CATGCGAGTTCTGGATTGGAG 59.061 52.381 0.00 0.00 0.00 3.86
105 106 1.278985 ACATGCGAGTTCTGGATTGGA 59.721 47.619 0.00 0.00 0.00 3.53
106 107 1.399440 CACATGCGAGTTCTGGATTGG 59.601 52.381 0.00 0.00 0.00 3.16
107 108 2.079158 ACACATGCGAGTTCTGGATTG 58.921 47.619 0.00 0.00 0.00 2.67
108 109 2.479566 ACACATGCGAGTTCTGGATT 57.520 45.000 0.00 0.00 0.00 3.01
109 110 2.479566 AACACATGCGAGTTCTGGAT 57.520 45.000 0.00 0.00 0.00 3.41
110 111 3.394674 TTAACACATGCGAGTTCTGGA 57.605 42.857 0.00 0.00 0.00 3.86
111 112 3.120199 CCTTTAACACATGCGAGTTCTGG 60.120 47.826 0.00 0.00 0.00 3.86
112 113 3.745975 TCCTTTAACACATGCGAGTTCTG 59.254 43.478 0.00 0.00 0.00 3.02
113 114 3.997021 CTCCTTTAACACATGCGAGTTCT 59.003 43.478 0.00 0.00 0.00 3.01
114 115 3.994392 TCTCCTTTAACACATGCGAGTTC 59.006 43.478 0.00 0.00 0.00 3.01
115 116 3.997021 CTCTCCTTTAACACATGCGAGTT 59.003 43.478 0.00 0.00 0.00 3.01
116 117 3.589988 CTCTCCTTTAACACATGCGAGT 58.410 45.455 0.00 0.00 0.00 4.18
117 118 2.932614 CCTCTCCTTTAACACATGCGAG 59.067 50.000 0.00 0.00 0.00 5.03
118 119 2.565391 TCCTCTCCTTTAACACATGCGA 59.435 45.455 0.00 0.00 0.00 5.10
119 120 2.932614 CTCCTCTCCTTTAACACATGCG 59.067 50.000 0.00 0.00 0.00 4.73
120 121 3.944087 ACTCCTCTCCTTTAACACATGC 58.056 45.455 0.00 0.00 0.00 4.06
121 122 7.979444 TTTAACTCCTCTCCTTTAACACATG 57.021 36.000 0.00 0.00 0.00 3.21
122 123 8.383175 TCATTTAACTCCTCTCCTTTAACACAT 58.617 33.333 0.00 0.00 0.00 3.21
123 124 7.741785 TCATTTAACTCCTCTCCTTTAACACA 58.258 34.615 0.00 0.00 0.00 3.72
124 125 8.095169 TCTCATTTAACTCCTCTCCTTTAACAC 58.905 37.037 0.00 0.00 0.00 3.32
125 126 8.202461 TCTCATTTAACTCCTCTCCTTTAACA 57.798 34.615 0.00 0.00 0.00 2.41
126 127 9.157104 CTTCTCATTTAACTCCTCTCCTTTAAC 57.843 37.037 0.00 0.00 0.00 2.01
127 128 9.101325 TCTTCTCATTTAACTCCTCTCCTTTAA 57.899 33.333 0.00 0.00 0.00 1.52
128 129 8.666129 TCTTCTCATTTAACTCCTCTCCTTTA 57.334 34.615 0.00 0.00 0.00 1.85
129 130 7.456269 TCTCTTCTCATTTAACTCCTCTCCTTT 59.544 37.037 0.00 0.00 0.00 3.11
130 131 6.957020 TCTCTTCTCATTTAACTCCTCTCCTT 59.043 38.462 0.00 0.00 0.00 3.36
131 132 6.498538 TCTCTTCTCATTTAACTCCTCTCCT 58.501 40.000 0.00 0.00 0.00 3.69
132 133 6.605594 TCTCTCTTCTCATTTAACTCCTCTCC 59.394 42.308 0.00 0.00 0.00 3.71
133 134 7.201821 CCTCTCTCTTCTCATTTAACTCCTCTC 60.202 44.444 0.00 0.00 0.00 3.20
134 135 6.607198 CCTCTCTCTTCTCATTTAACTCCTCT 59.393 42.308 0.00 0.00 0.00 3.69
135 136 6.605594 TCCTCTCTCTTCTCATTTAACTCCTC 59.394 42.308 0.00 0.00 0.00 3.71
136 137 6.379988 GTCCTCTCTCTTCTCATTTAACTCCT 59.620 42.308 0.00 0.00 0.00 3.69
137 138 6.379988 AGTCCTCTCTCTTCTCATTTAACTCC 59.620 42.308 0.00 0.00 0.00 3.85
138 139 7.404671 AGTCCTCTCTCTTCTCATTTAACTC 57.595 40.000 0.00 0.00 0.00 3.01
139 140 8.887264 TTAGTCCTCTCTCTTCTCATTTAACT 57.113 34.615 0.00 0.00 0.00 2.24
140 141 9.744468 GATTAGTCCTCTCTCTTCTCATTTAAC 57.256 37.037 0.00 0.00 0.00 2.01
141 142 8.919145 GGATTAGTCCTCTCTCTTCTCATTTAA 58.081 37.037 0.00 0.00 41.60 1.52
142 143 8.061920 TGGATTAGTCCTCTCTCTTCTCATTTA 58.938 37.037 5.79 0.00 45.32 1.40
143 144 6.900186 TGGATTAGTCCTCTCTCTTCTCATTT 59.100 38.462 5.79 0.00 45.32 2.32
144 145 6.323739 GTGGATTAGTCCTCTCTCTTCTCATT 59.676 42.308 5.79 0.00 45.32 2.57
145 146 5.833131 GTGGATTAGTCCTCTCTCTTCTCAT 59.167 44.000 5.79 0.00 45.32 2.90
146 147 5.197451 GTGGATTAGTCCTCTCTCTTCTCA 58.803 45.833 5.79 0.00 45.32 3.27
147 148 5.197451 TGTGGATTAGTCCTCTCTCTTCTC 58.803 45.833 5.79 0.00 45.32 2.87
148 149 5.199982 TGTGGATTAGTCCTCTCTCTTCT 57.800 43.478 5.79 0.00 45.32 2.85
149 150 6.478512 AATGTGGATTAGTCCTCTCTCTTC 57.521 41.667 5.79 0.00 45.32 2.87
150 151 6.882768 AAATGTGGATTAGTCCTCTCTCTT 57.117 37.500 5.79 0.00 45.32 2.85
151 152 6.882768 AAAATGTGGATTAGTCCTCTCTCT 57.117 37.500 5.79 0.00 45.32 3.10
152 153 7.787028 ACTAAAATGTGGATTAGTCCTCTCTC 58.213 38.462 5.79 0.00 45.32 3.20
153 154 7.741554 ACTAAAATGTGGATTAGTCCTCTCT 57.258 36.000 5.79 0.00 45.32 3.10
154 155 8.145122 CCTACTAAAATGTGGATTAGTCCTCTC 58.855 40.741 5.79 0.00 45.32 3.20
155 156 7.071321 CCCTACTAAAATGTGGATTAGTCCTCT 59.929 40.741 5.79 0.00 45.32 3.69
156 157 7.217906 CCCTACTAAAATGTGGATTAGTCCTC 58.782 42.308 5.79 2.58 45.32 3.71
157 158 6.101296 CCCCTACTAAAATGTGGATTAGTCCT 59.899 42.308 5.79 0.00 45.32 3.85
158 159 6.126565 ACCCCTACTAAAATGTGGATTAGTCC 60.127 42.308 0.00 0.00 40.53 3.85
159 160 6.896883 ACCCCTACTAAAATGTGGATTAGTC 58.103 40.000 1.78 0.00 40.53 2.59
160 161 6.903340 ACCCCTACTAAAATGTGGATTAGT 57.097 37.500 3.93 3.93 43.05 2.24
161 162 7.222161 GGTACCCCTACTAAAATGTGGATTAG 58.778 42.308 0.00 0.00 35.67 1.73
162 163 7.140522 GGTACCCCTACTAAAATGTGGATTA 57.859 40.000 0.00 0.00 0.00 1.75
163 164 6.009908 GGTACCCCTACTAAAATGTGGATT 57.990 41.667 0.00 0.00 0.00 3.01
164 165 5.641789 GGTACCCCTACTAAAATGTGGAT 57.358 43.478 0.00 0.00 0.00 3.41
205 206 4.223255 AGGGGCTAAAACTAGTCTTGAGAC 59.777 45.833 0.00 2.93 45.08 3.36
206 207 4.426704 AGGGGCTAAAACTAGTCTTGAGA 58.573 43.478 0.00 0.00 0.00 3.27
207 208 4.468153 AGAGGGGCTAAAACTAGTCTTGAG 59.532 45.833 0.00 0.00 0.00 3.02
208 209 4.426704 AGAGGGGCTAAAACTAGTCTTGA 58.573 43.478 0.00 0.00 0.00 3.02
209 210 4.828072 AGAGGGGCTAAAACTAGTCTTG 57.172 45.455 0.00 0.00 0.00 3.02
210 211 5.844773 AAAGAGGGGCTAAAACTAGTCTT 57.155 39.130 0.00 0.00 0.00 3.01
211 212 6.024247 ACTAAAGAGGGGCTAAAACTAGTCT 58.976 40.000 0.00 0.00 0.00 3.24
212 213 6.070938 TCACTAAAGAGGGGCTAAAACTAGTC 60.071 42.308 0.00 0.00 0.00 2.59
213 214 5.783875 TCACTAAAGAGGGGCTAAAACTAGT 59.216 40.000 0.00 0.00 0.00 2.57
214 215 6.295719 TCACTAAAGAGGGGCTAAAACTAG 57.704 41.667 0.00 0.00 0.00 2.57
215 216 6.295719 CTCACTAAAGAGGGGCTAAAACTA 57.704 41.667 0.00 0.00 31.94 2.24
216 217 5.167303 CTCACTAAAGAGGGGCTAAAACT 57.833 43.478 0.00 0.00 31.94 2.66
227 228 4.478206 TCAAGCATCCCTCACTAAAGAG 57.522 45.455 0.00 0.00 35.39 2.85
228 229 4.908601 TTCAAGCATCCCTCACTAAAGA 57.091 40.909 0.00 0.00 0.00 2.52
229 230 5.006386 AGTTTCAAGCATCCCTCACTAAAG 58.994 41.667 0.00 0.00 0.00 1.85
230 231 4.985538 AGTTTCAAGCATCCCTCACTAAA 58.014 39.130 0.00 0.00 0.00 1.85
231 232 4.640771 AGTTTCAAGCATCCCTCACTAA 57.359 40.909 0.00 0.00 0.00 2.24
232 233 4.640771 AAGTTTCAAGCATCCCTCACTA 57.359 40.909 0.00 0.00 0.00 2.74
233 234 3.515602 AAGTTTCAAGCATCCCTCACT 57.484 42.857 0.00 0.00 0.00 3.41
234 235 4.379918 GCTAAAGTTTCAAGCATCCCTCAC 60.380 45.833 5.64 0.00 36.26 3.51
235 236 3.758554 GCTAAAGTTTCAAGCATCCCTCA 59.241 43.478 5.64 0.00 36.26 3.86
236 237 3.129462 GGCTAAAGTTTCAAGCATCCCTC 59.871 47.826 11.51 0.00 38.01 4.30
237 238 3.092301 GGCTAAAGTTTCAAGCATCCCT 58.908 45.455 11.51 0.00 38.01 4.20
238 239 3.092301 AGGCTAAAGTTTCAAGCATCCC 58.908 45.455 11.51 0.00 38.01 3.85
239 240 4.013050 AGAGGCTAAAGTTTCAAGCATCC 58.987 43.478 17.20 5.18 45.55 3.51
240 241 5.635417 AAGAGGCTAAAGTTTCAAGCATC 57.365 39.130 14.33 14.33 44.95 3.91
241 242 7.524717 TTTAAGAGGCTAAAGTTTCAAGCAT 57.475 32.000 11.51 5.16 38.01 3.79
242 243 6.952773 TTTAAGAGGCTAAAGTTTCAAGCA 57.047 33.333 11.51 0.00 38.01 3.91
243 244 8.082242 TCATTTTAAGAGGCTAAAGTTTCAAGC 58.918 33.333 2.28 2.28 35.47 4.01
244 245 9.399403 GTCATTTTAAGAGGCTAAAGTTTCAAG 57.601 33.333 0.00 0.00 0.00 3.02
245 246 9.131791 AGTCATTTTAAGAGGCTAAAGTTTCAA 57.868 29.630 0.00 0.00 0.00 2.69
246 247 8.691661 AGTCATTTTAAGAGGCTAAAGTTTCA 57.308 30.769 0.00 0.00 0.00 2.69
284 285 9.825109 GCTTGGATCTAAGAGACTTATTTTAGT 57.175 33.333 21.83 0.00 0.00 2.24
285 286 9.823647 TGCTTGGATCTAAGAGACTTATTTTAG 57.176 33.333 21.83 0.00 0.00 1.85
286 287 9.601217 GTGCTTGGATCTAAGAGACTTATTTTA 57.399 33.333 21.83 0.00 0.00 1.52
287 288 7.554476 GGTGCTTGGATCTAAGAGACTTATTTT 59.446 37.037 21.83 0.00 0.00 1.82
288 289 7.051000 GGTGCTTGGATCTAAGAGACTTATTT 58.949 38.462 21.83 0.00 0.00 1.40
289 290 6.408662 GGGTGCTTGGATCTAAGAGACTTATT 60.409 42.308 21.83 0.00 0.00 1.40
290 291 5.071115 GGGTGCTTGGATCTAAGAGACTTAT 59.929 44.000 21.83 0.00 0.00 1.73
291 292 4.406003 GGGTGCTTGGATCTAAGAGACTTA 59.594 45.833 21.83 0.00 0.00 2.24
292 293 3.198853 GGGTGCTTGGATCTAAGAGACTT 59.801 47.826 21.83 0.00 0.00 3.01
293 294 2.769095 GGGTGCTTGGATCTAAGAGACT 59.231 50.000 21.83 0.00 0.00 3.24
294 295 2.769095 AGGGTGCTTGGATCTAAGAGAC 59.231 50.000 21.83 15.64 0.00 3.36
295 296 3.121929 AGGGTGCTTGGATCTAAGAGA 57.878 47.619 21.83 5.07 0.00 3.10
296 297 3.922171 AAGGGTGCTTGGATCTAAGAG 57.078 47.619 21.83 0.00 0.00 2.85
297 298 5.772393 TTAAAGGGTGCTTGGATCTAAGA 57.228 39.130 21.83 5.12 0.00 2.10
298 299 6.834168 TTTTAAAGGGTGCTTGGATCTAAG 57.166 37.500 14.13 14.13 0.00 2.18
299 300 8.113462 ACTATTTTAAAGGGTGCTTGGATCTAA 58.887 33.333 0.00 0.00 0.00 2.10
300 301 7.639378 ACTATTTTAAAGGGTGCTTGGATCTA 58.361 34.615 0.00 0.00 0.00 1.98
301 302 6.494059 ACTATTTTAAAGGGTGCTTGGATCT 58.506 36.000 0.00 0.00 0.00 2.75
302 303 6.775594 ACTATTTTAAAGGGTGCTTGGATC 57.224 37.500 0.00 0.00 0.00 3.36
303 304 7.410991 AGTACTATTTTAAAGGGTGCTTGGAT 58.589 34.615 0.00 0.00 0.00 3.41
304 305 6.786122 AGTACTATTTTAAAGGGTGCTTGGA 58.214 36.000 0.00 0.00 0.00 3.53
305 306 7.827729 AGTAGTACTATTTTAAAGGGTGCTTGG 59.172 37.037 5.75 0.00 0.00 3.61
306 307 8.788325 AGTAGTACTATTTTAAAGGGTGCTTG 57.212 34.615 5.75 0.00 0.00 4.01
307 308 9.881649 GTAGTAGTACTATTTTAAAGGGTGCTT 57.118 33.333 13.09 0.00 32.65 3.91
308 309 8.481314 GGTAGTAGTACTATTTTAAAGGGTGCT 58.519 37.037 13.09 10.61 32.65 4.40
309 310 8.481314 AGGTAGTAGTACTATTTTAAAGGGTGC 58.519 37.037 13.09 0.00 32.65 5.01
404 406 7.435068 TTTTGAAATAGTGCTACACCTTCTC 57.565 36.000 0.00 0.00 34.49 2.87
408 410 8.177119 TCAAATTTTGAAATAGTGCTACACCT 57.823 30.769 9.36 0.00 36.59 4.00
441 443 9.814899 ATGAGATGTTGTTTTTGTTAATTCACA 57.185 25.926 0.00 0.00 0.00 3.58
457 459 4.034858 CACTTTCGATGGGATGAGATGTTG 59.965 45.833 0.00 0.00 0.00 3.33
461 619 2.171237 TGCACTTTCGATGGGATGAGAT 59.829 45.455 0.00 0.00 0.00 2.75
472 630 1.773410 TTTCGTCGATGCACTTTCGA 58.227 45.000 6.79 6.79 42.87 3.71
479 637 0.034198 TCAGGGTTTTCGTCGATGCA 59.966 50.000 0.00 0.00 0.00 3.96
486 644 8.801882 TTCTGAATATATTTCAGGGTTTTCGT 57.198 30.769 19.02 0.00 44.43 3.85
493 651 9.778993 CGCATTATTTCTGAATATATTTCAGGG 57.221 33.333 19.02 5.07 44.43 4.45
524 682 3.275999 CCACTACGGTTTAAATCCTGGG 58.724 50.000 0.00 0.00 0.00 4.45
550 708 4.298626 TGGTTAGAGGGACAATGCTATCT 58.701 43.478 0.00 0.00 0.00 1.98
667 828 9.682465 AGAAATTTTGAAGTATTACTACCCTCC 57.318 33.333 0.00 0.00 0.00 4.30
905 1087 0.543749 GGTGTGGAGATGGAAGGAGG 59.456 60.000 0.00 0.00 0.00 4.30
972 1154 6.350906 CGTAACCTCTATTGGTATTTGGGAA 58.649 40.000 0.00 0.00 39.83 3.97
1062 1244 2.815211 GCGGCAGCTTCATCGTCA 60.815 61.111 0.00 0.00 41.01 4.35
1131 1313 1.222113 GTACCTGCCTGGAAGCCTC 59.778 63.158 0.00 0.00 39.71 4.70
1364 1546 1.079750 GGAAGCTCGAAGAACCGCT 60.080 57.895 0.00 0.00 34.09 5.52
1401 1583 1.470805 CGGACATCAGCGGACATGTAA 60.471 52.381 0.00 0.00 33.22 2.41
1482 1664 1.135141 CAGGAGAGCTTGAGGAAGTCG 60.135 57.143 0.00 0.00 0.00 4.18
1683 1865 0.735978 TCACCGTCATCATGTGCGAC 60.736 55.000 6.06 0.00 31.82 5.19
1782 1964 2.680352 TCCACCTCGTCCTGGAGC 60.680 66.667 0.00 0.00 32.49 4.70
2107 2294 6.206048 GCCAGTGTACTAGTATTTGGTTTTGT 59.794 38.462 21.51 0.00 0.00 2.83
2205 3919 9.144747 GGCATCACTATCTAATTGTATACTGTG 57.855 37.037 4.17 0.00 0.00 3.66
2302 4016 6.303054 TCATGCATCTAGAGAGCTACTAGTT 58.697 40.000 19.93 13.00 38.59 2.24
2495 4211 5.409211 TCCGCAAAATTGTGAGTACGTATA 58.591 37.500 8.22 0.00 41.01 1.47
2496 4212 4.247258 TCCGCAAAATTGTGAGTACGTAT 58.753 39.130 8.22 0.00 41.01 3.06
2586 4308 4.604784 ACTTAAGACTAGGCTGACCCTA 57.395 45.455 10.09 0.00 44.08 3.53
2590 4312 6.274579 GTTGGATACTTAAGACTAGGCTGAC 58.725 44.000 10.09 0.00 37.61 3.51
2691 4414 5.879223 TGTCAGCCATTTGTTCAATGTTTTT 59.121 32.000 0.00 0.00 40.87 1.94
2692 4415 5.426504 TGTCAGCCATTTGTTCAATGTTTT 58.573 33.333 0.00 0.00 40.87 2.43
2693 4416 5.021033 TGTCAGCCATTTGTTCAATGTTT 57.979 34.783 0.00 0.00 40.87 2.83
2694 4417 4.341806 TCTGTCAGCCATTTGTTCAATGTT 59.658 37.500 0.00 0.00 40.87 2.71
2695 4418 3.890756 TCTGTCAGCCATTTGTTCAATGT 59.109 39.130 0.00 0.00 40.87 2.71
2696 4419 4.508461 TCTGTCAGCCATTTGTTCAATG 57.492 40.909 0.00 0.00 41.99 2.82
2697 4420 4.081862 CCATCTGTCAGCCATTTGTTCAAT 60.082 41.667 0.00 0.00 0.00 2.57
2698 4421 3.256383 CCATCTGTCAGCCATTTGTTCAA 59.744 43.478 0.00 0.00 0.00 2.69
2699 4422 2.821378 CCATCTGTCAGCCATTTGTTCA 59.179 45.455 0.00 0.00 0.00 3.18
2700 4423 3.084039 TCCATCTGTCAGCCATTTGTTC 58.916 45.455 0.00 0.00 0.00 3.18
2701 4424 2.821969 GTCCATCTGTCAGCCATTTGTT 59.178 45.455 0.00 0.00 0.00 2.83
2702 4425 2.224843 TGTCCATCTGTCAGCCATTTGT 60.225 45.455 0.00 0.00 0.00 2.83
2703 4426 2.439409 TGTCCATCTGTCAGCCATTTG 58.561 47.619 0.00 0.00 0.00 2.32
2704 4427 2.885135 TGTCCATCTGTCAGCCATTT 57.115 45.000 0.00 0.00 0.00 2.32
2705 4428 3.377253 AATGTCCATCTGTCAGCCATT 57.623 42.857 0.00 0.00 0.00 3.16
2706 4429 3.377253 AAATGTCCATCTGTCAGCCAT 57.623 42.857 0.00 0.00 0.00 4.40
2707 4430 2.885135 AAATGTCCATCTGTCAGCCA 57.115 45.000 0.00 0.00 0.00 4.75
2708 4431 3.367703 CCAAAAATGTCCATCTGTCAGCC 60.368 47.826 0.00 0.00 0.00 4.85
2709 4432 3.256631 ACCAAAAATGTCCATCTGTCAGC 59.743 43.478 0.00 0.00 0.00 4.26
2710 4433 4.801891 CACCAAAAATGTCCATCTGTCAG 58.198 43.478 0.00 0.00 0.00 3.51
2711 4434 3.005684 GCACCAAAAATGTCCATCTGTCA 59.994 43.478 0.00 0.00 0.00 3.58
2803 4526 1.430632 GAACGACGCCACCGAGATA 59.569 57.895 0.00 0.00 38.29 1.98
2994 4717 1.594862 GCATCAATAGTGGACGTCAGC 59.405 52.381 18.91 9.18 0.00 4.26
3007 4730 2.715749 TCGGATGTTGAGGCATCAAT 57.284 45.000 17.80 1.40 46.75 2.57
3023 4746 2.095263 ACGCAAAGGTCAATGAAATCGG 60.095 45.455 0.00 0.00 0.00 4.18
3077 4800 0.039035 TGGTATGGGGTGTTGGCTTC 59.961 55.000 0.00 0.00 0.00 3.86
3227 5392 5.531659 ACTGATGGAAATATAGACGACTCGT 59.468 40.000 3.08 3.08 45.10 4.18
3234 5399 9.692749 TTACGATCAACTGATGGAAATATAGAC 57.307 33.333 8.49 0.00 34.83 2.59
3417 5582 3.576982 TGTTCTACAGTCACCAGGGTAAG 59.423 47.826 0.00 0.00 0.00 2.34
3424 5589 4.065088 GAGCAATTGTTCTACAGTCACCA 58.935 43.478 14.41 0.00 0.00 4.17
3490 5655 8.862325 TGGTATTGGATGATTGTACCATATTC 57.138 34.615 0.00 0.00 39.72 1.75
3573 5738 5.416952 CCAAACAGAATAAGGCAGACAAGAT 59.583 40.000 0.00 0.00 0.00 2.40
3645 5810 6.305693 ACAAGATCTTTAACTCTGCAACAC 57.694 37.500 4.86 0.00 0.00 3.32
3648 5813 5.869579 AGGACAAGATCTTTAACTCTGCAA 58.130 37.500 4.86 0.00 0.00 4.08
3721 5886 1.507140 TCACCACCATGGAGGATACC 58.493 55.000 32.26 0.00 40.96 2.73
3722 5887 2.746472 GCTTCACCACCATGGAGGATAC 60.746 54.545 32.26 13.82 40.96 2.24
3723 5888 1.490490 GCTTCACCACCATGGAGGATA 59.510 52.381 32.26 17.35 40.96 2.59
3724 5889 0.257039 GCTTCACCACCATGGAGGAT 59.743 55.000 32.26 15.08 40.96 3.24
3725 5890 1.685224 GCTTCACCACCATGGAGGA 59.315 57.895 32.26 10.33 40.96 3.71
3726 5891 1.379044 GGCTTCACCACCATGGAGG 60.379 63.158 25.14 25.14 40.96 4.30
3727 5892 1.746615 CGGCTTCACCACCATGGAG 60.747 63.158 21.47 11.19 40.96 3.86
3728 5893 2.350895 CGGCTTCACCACCATGGA 59.649 61.111 21.47 0.00 40.96 3.41
3729 5894 2.034066 ACGGCTTCACCACCATGG 59.966 61.111 11.19 11.19 45.02 3.66
3730 5895 2.390599 CGACGGCTTCACCACCATG 61.391 63.158 0.00 0.00 39.03 3.66
3731 5896 2.047274 CGACGGCTTCACCACCAT 60.047 61.111 0.00 0.00 39.03 3.55
3732 5897 3.509137 GACGACGGCTTCACCACCA 62.509 63.158 0.00 0.00 39.03 4.17
3733 5898 2.737376 GACGACGGCTTCACCACC 60.737 66.667 0.00 0.00 39.03 4.61
3734 5899 3.103911 CGACGACGGCTTCACCAC 61.104 66.667 0.00 0.00 39.03 4.16
3735 5900 3.263503 CTCGACGACGGCTTCACCA 62.264 63.158 7.55 0.00 39.03 4.17
3736 5901 2.504244 CTCGACGACGGCTTCACC 60.504 66.667 7.55 0.00 40.21 4.02
3737 5902 2.504244 CCTCGACGACGGCTTCAC 60.504 66.667 7.55 0.00 40.21 3.18
3738 5903 4.415332 GCCTCGACGACGGCTTCA 62.415 66.667 22.92 0.00 42.98 3.02
3744 5909 4.394078 TCCAACGCCTCGACGACG 62.394 66.667 0.00 0.00 41.26 5.12
3745 5910 2.804090 GTCCAACGCCTCGACGAC 60.804 66.667 2.12 0.00 36.70 4.34
3746 5911 4.047059 GGTCCAACGCCTCGACGA 62.047 66.667 2.12 0.00 36.70 4.20
3755 5920 4.368808 CAAGTGCGCGGTCCAACG 62.369 66.667 8.83 0.00 0.00 4.10
3756 5921 4.683334 GCAAGTGCGCGGTCCAAC 62.683 66.667 8.83 0.00 0.00 3.77
3785 5950 3.948719 GCCGGAAGTGGTGGACCA 61.949 66.667 5.05 0.00 45.30 4.02
3786 5951 4.717313 GGCCGGAAGTGGTGGACC 62.717 72.222 5.05 0.00 0.00 4.46
3787 5952 3.607370 GAGGCCGGAAGTGGTGGAC 62.607 68.421 5.05 0.00 0.00 4.02
3788 5953 3.319198 GAGGCCGGAAGTGGTGGA 61.319 66.667 5.05 0.00 0.00 4.02
3789 5954 4.410400 GGAGGCCGGAAGTGGTGG 62.410 72.222 5.05 0.00 0.00 4.61
3790 5955 3.190738 TTGGAGGCCGGAAGTGGTG 62.191 63.158 5.05 0.00 0.00 4.17
3791 5956 2.852075 TTGGAGGCCGGAAGTGGT 60.852 61.111 5.05 0.00 0.00 4.16
3792 5957 2.045926 CTTGGAGGCCGGAAGTGG 60.046 66.667 5.05 0.00 0.00 4.00
3793 5958 2.747855 GCTTGGAGGCCGGAAGTG 60.748 66.667 5.05 0.00 0.00 3.16
3794 5959 4.394712 CGCTTGGAGGCCGGAAGT 62.395 66.667 5.05 0.00 0.00 3.01
3795 5960 3.605749 TTCGCTTGGAGGCCGGAAG 62.606 63.158 5.05 0.00 0.00 3.46
3796 5961 3.185299 TTTCGCTTGGAGGCCGGAA 62.185 57.895 5.05 0.00 0.00 4.30
3797 5962 3.605749 CTTTCGCTTGGAGGCCGGA 62.606 63.158 5.05 0.00 0.00 5.14
3798 5963 3.127533 CTTTCGCTTGGAGGCCGG 61.128 66.667 0.00 0.00 0.00 6.13
3799 5964 3.127533 CCTTTCGCTTGGAGGCCG 61.128 66.667 0.00 0.00 0.00 6.13
3800 5965 1.746991 CTCCTTTCGCTTGGAGGCC 60.747 63.158 0.00 0.00 44.44 5.19
3801 5966 3.896479 CTCCTTTCGCTTGGAGGC 58.104 61.111 8.81 0.00 44.44 4.70
3803 5968 0.107945 CTCCCTCCTTTCGCTTGGAG 60.108 60.000 9.47 9.47 46.91 3.86
3804 5969 1.553690 CCTCCCTCCTTTCGCTTGGA 61.554 60.000 0.00 0.00 0.00 3.53
3805 5970 1.078143 CCTCCCTCCTTTCGCTTGG 60.078 63.158 0.00 0.00 0.00 3.61
3806 5971 1.746991 GCCTCCCTCCTTTCGCTTG 60.747 63.158 0.00 0.00 0.00 4.01
3807 5972 2.671682 GCCTCCCTCCTTTCGCTT 59.328 61.111 0.00 0.00 0.00 4.68
3808 5973 3.403558 GGCCTCCCTCCTTTCGCT 61.404 66.667 0.00 0.00 0.00 4.93
3809 5974 4.840005 CGGCCTCCCTCCTTTCGC 62.840 72.222 0.00 0.00 0.00 4.70
3810 5975 3.372554 GACGGCCTCCCTCCTTTCG 62.373 68.421 0.00 0.00 0.00 3.46
3811 5976 0.686769 TAGACGGCCTCCCTCCTTTC 60.687 60.000 0.00 0.00 0.00 2.62
3812 5977 0.976590 GTAGACGGCCTCCCTCCTTT 60.977 60.000 0.00 0.00 0.00 3.11
3813 5978 1.381463 GTAGACGGCCTCCCTCCTT 60.381 63.158 0.00 0.00 0.00 3.36
3814 5979 2.279408 GTAGACGGCCTCCCTCCT 59.721 66.667 0.00 0.00 0.00 3.69
3815 5980 3.217743 CGTAGACGGCCTCCCTCC 61.218 72.222 0.00 0.00 35.37 4.30
3816 5981 2.124403 TCGTAGACGGCCTCCCTC 60.124 66.667 0.00 0.00 40.29 4.30
3836 6001 4.657824 CCACTTCCGCGTCCACGT 62.658 66.667 4.92 0.00 42.22 4.49
3837 6002 4.351938 TCCACTTCCGCGTCCACG 62.352 66.667 4.92 0.00 43.27 4.94
3838 6003 2.432628 CTCCACTTCCGCGTCCAC 60.433 66.667 4.92 0.00 0.00 4.02
3839 6004 3.691342 CCTCCACTTCCGCGTCCA 61.691 66.667 4.92 0.00 0.00 4.02
3840 6005 3.644399 GACCTCCACTTCCGCGTCC 62.644 68.421 4.92 0.00 0.00 4.79
3841 6006 2.126031 GACCTCCACTTCCGCGTC 60.126 66.667 4.92 0.00 0.00 5.19
3842 6007 4.052229 CGACCTCCACTTCCGCGT 62.052 66.667 4.92 0.00 0.00 6.01
3843 6008 4.796231 CCGACCTCCACTTCCGCG 62.796 72.222 0.00 0.00 0.00 6.46
3845 6010 4.796231 CGCCGACCTCCACTTCCG 62.796 72.222 0.00 0.00 0.00 4.30
3846 6011 3.236003 AACGCCGACCTCCACTTCC 62.236 63.158 0.00 0.00 0.00 3.46
3847 6012 2.027625 CAACGCCGACCTCCACTTC 61.028 63.158 0.00 0.00 0.00 3.01
3848 6013 1.466025 TACAACGCCGACCTCCACTT 61.466 55.000 0.00 0.00 0.00 3.16
3849 6014 1.874345 CTACAACGCCGACCTCCACT 61.874 60.000 0.00 0.00 0.00 4.00
3850 6015 1.445582 CTACAACGCCGACCTCCAC 60.446 63.158 0.00 0.00 0.00 4.02
3851 6016 2.642254 CCTACAACGCCGACCTCCA 61.642 63.158 0.00 0.00 0.00 3.86
3852 6017 2.183555 CCTACAACGCCGACCTCC 59.816 66.667 0.00 0.00 0.00 4.30
3853 6018 2.508663 GCCTACAACGCCGACCTC 60.509 66.667 0.00 0.00 0.00 3.85
3854 6019 4.430765 CGCCTACAACGCCGACCT 62.431 66.667 0.00 0.00 0.00 3.85
3855 6020 4.729856 ACGCCTACAACGCCGACC 62.730 66.667 0.00 0.00 0.00 4.79
3856 6021 3.475774 CACGCCTACAACGCCGAC 61.476 66.667 0.00 0.00 0.00 4.79
3857 6022 3.620300 CTCACGCCTACAACGCCGA 62.620 63.158 0.00 0.00 0.00 5.54
3858 6023 3.179265 CTCACGCCTACAACGCCG 61.179 66.667 0.00 0.00 0.00 6.46
3859 6024 1.805945 CTCTCACGCCTACAACGCC 60.806 63.158 0.00 0.00 0.00 5.68
3860 6025 1.071567 GTCTCTCACGCCTACAACGC 61.072 60.000 0.00 0.00 0.00 4.84
3861 6026 0.793478 CGTCTCTCACGCCTACAACG 60.793 60.000 0.00 0.00 42.87 4.10
3862 6027 3.017232 CGTCTCTCACGCCTACAAC 57.983 57.895 0.00 0.00 42.87 3.32
3887 6052 2.819595 CATCCACTTCCGGCCGTG 60.820 66.667 26.12 15.70 0.00 4.94
3888 6053 3.310860 GACATCCACTTCCGGCCGT 62.311 63.158 26.12 1.14 0.00 5.68
3889 6054 2.511600 GACATCCACTTCCGGCCG 60.512 66.667 21.04 21.04 0.00 6.13
3890 6055 2.511600 CGACATCCACTTCCGGCC 60.512 66.667 0.00 0.00 0.00 6.13
3891 6056 1.519455 CTCGACATCCACTTCCGGC 60.519 63.158 0.00 0.00 0.00 6.13
3892 6057 1.141881 CCTCGACATCCACTTCCGG 59.858 63.158 0.00 0.00 0.00 5.14
3893 6058 1.519455 GCCTCGACATCCACTTCCG 60.519 63.158 0.00 0.00 0.00 4.30
3894 6059 1.153349 GGCCTCGACATCCACTTCC 60.153 63.158 0.00 0.00 0.00 3.46
3895 6060 1.519455 CGGCCTCGACATCCACTTC 60.519 63.158 0.00 0.00 39.00 3.01
3896 6061 2.227089 GACGGCCTCGACATCCACTT 62.227 60.000 0.00 0.00 40.11 3.16
3897 6062 2.680352 ACGGCCTCGACATCCACT 60.680 61.111 0.00 0.00 40.11 4.00
3898 6063 2.202756 GACGGCCTCGACATCCAC 60.203 66.667 0.00 0.00 40.11 4.02
3899 6064 3.822192 CGACGGCCTCGACATCCA 61.822 66.667 16.62 0.00 46.14 3.41
3900 6065 3.471244 CTCGACGGCCTCGACATCC 62.471 68.421 19.22 0.00 46.75 3.51
3901 6066 2.024871 CTCGACGGCCTCGACATC 59.975 66.667 19.22 0.00 46.75 3.06
3902 6067 4.194720 GCTCGACGGCCTCGACAT 62.195 66.667 19.22 0.00 46.75 3.06
3904 6069 4.117661 AAGCTCGACGGCCTCGAC 62.118 66.667 19.22 16.05 46.75 4.20
3906 6071 3.626680 TTCAAGCTCGACGGCCTCG 62.627 63.158 15.77 15.77 44.44 4.63
3907 6072 1.807573 CTTCAAGCTCGACGGCCTC 60.808 63.158 0.00 0.00 0.00 4.70
3908 6073 2.100879 AACTTCAAGCTCGACGGCCT 62.101 55.000 0.00 0.00 0.00 5.19
3909 6074 1.668151 AACTTCAAGCTCGACGGCC 60.668 57.895 0.00 0.00 0.00 6.13
3910 6075 1.493311 CAACTTCAAGCTCGACGGC 59.507 57.895 0.00 0.00 0.00 5.68
3911 6076 1.221466 TGCAACTTCAAGCTCGACGG 61.221 55.000 0.00 0.00 0.00 4.79
3912 6077 0.581529 TTGCAACTTCAAGCTCGACG 59.418 50.000 0.00 0.00 0.00 5.12
3913 6078 1.657538 CGTTGCAACTTCAAGCTCGAC 60.658 52.381 26.09 0.00 33.47 4.20
3914 6079 0.581529 CGTTGCAACTTCAAGCTCGA 59.418 50.000 26.09 0.00 33.47 4.04
3915 6080 0.993746 GCGTTGCAACTTCAAGCTCG 60.994 55.000 26.09 11.52 34.23 5.03
3916 6081 0.308993 AGCGTTGCAACTTCAAGCTC 59.691 50.000 26.09 6.06 30.39 4.09
3917 6082 0.308993 GAGCGTTGCAACTTCAAGCT 59.691 50.000 26.09 24.58 35.08 3.74
3918 6083 0.661483 GGAGCGTTGCAACTTCAAGC 60.661 55.000 26.09 20.62 0.00 4.01
3919 6084 0.384725 CGGAGCGTTGCAACTTCAAG 60.385 55.000 26.09 16.12 0.00 3.02
3920 6085 1.092921 ACGGAGCGTTGCAACTTCAA 61.093 50.000 26.09 0.00 36.35 2.69
3921 6086 0.249531 TACGGAGCGTTGCAACTTCA 60.250 50.000 26.09 6.68 41.54 3.02
3922 6087 0.163146 GTACGGAGCGTTGCAACTTC 59.837 55.000 26.09 21.37 41.54 3.01
3923 6088 1.554042 CGTACGGAGCGTTGCAACTT 61.554 55.000 26.09 14.82 41.54 2.66
3924 6089 2.019951 CGTACGGAGCGTTGCAACT 61.020 57.895 26.09 9.60 41.54 3.16
3925 6090 2.468532 CGTACGGAGCGTTGCAAC 59.531 61.111 19.89 19.89 41.54 4.17
3926 6091 3.408020 GCGTACGGAGCGTTGCAA 61.408 61.111 18.39 0.00 41.54 4.08
3927 6092 4.649310 TGCGTACGGAGCGTTGCA 62.649 61.111 18.39 0.05 43.58 4.08
3928 6093 3.186047 ATGCGTACGGAGCGTTGC 61.186 61.111 18.39 0.00 41.54 4.17
3929 6094 1.803922 TCATGCGTACGGAGCGTTG 60.804 57.895 18.39 9.59 41.54 4.10
3930 6095 1.804326 GTCATGCGTACGGAGCGTT 60.804 57.895 18.39 0.00 41.54 4.84
3931 6096 2.202570 GTCATGCGTACGGAGCGT 60.203 61.111 18.39 0.00 44.35 5.07
3932 6097 2.954868 GGTCATGCGTACGGAGCG 60.955 66.667 18.39 9.99 37.44 5.03
3933 6098 1.589196 GAGGTCATGCGTACGGAGC 60.589 63.158 18.39 14.89 0.00 4.70
3934 6099 1.298413 CGAGGTCATGCGTACGGAG 60.298 63.158 18.39 8.54 0.00 4.63
3935 6100 1.985447 GACGAGGTCATGCGTACGGA 61.985 60.000 18.39 15.91 41.34 4.69
3936 6101 1.585521 GACGAGGTCATGCGTACGG 60.586 63.158 18.39 0.00 41.34 4.02
3937 6102 1.933041 CGACGAGGTCATGCGTACG 60.933 63.158 11.84 11.84 41.34 3.67
3938 6103 2.222217 GCGACGAGGTCATGCGTAC 61.222 63.158 0.00 0.00 41.34 3.67
3939 6104 2.101575 GCGACGAGGTCATGCGTA 59.898 61.111 0.00 0.00 41.34 4.42
3943 6108 3.250323 CTGCGCGACGAGGTCATG 61.250 66.667 12.10 0.00 32.09 3.07
3958 6123 3.452786 TTCTCCTCCGCCGAGCTG 61.453 66.667 0.00 0.00 34.49 4.24
3959 6124 3.453679 GTTCTCCTCCGCCGAGCT 61.454 66.667 0.00 0.00 34.49 4.09
3960 6125 2.892542 GAAGTTCTCCTCCGCCGAGC 62.893 65.000 0.00 0.00 34.49 5.03
3961 6126 1.139947 GAAGTTCTCCTCCGCCGAG 59.860 63.158 0.00 0.00 35.72 4.63
3962 6127 1.605451 TGAAGTTCTCCTCCGCCGA 60.605 57.895 4.17 0.00 0.00 5.54
3963 6128 1.446272 GTGAAGTTCTCCTCCGCCG 60.446 63.158 4.17 0.00 0.00 6.46
3964 6129 1.446272 CGTGAAGTTCTCCTCCGCC 60.446 63.158 4.17 0.00 0.00 6.13
3965 6130 0.456995 CTCGTGAAGTTCTCCTCCGC 60.457 60.000 4.17 0.00 0.00 5.54
3966 6131 1.166129 TCTCGTGAAGTTCTCCTCCG 58.834 55.000 4.17 0.00 0.00 4.63
3967 6132 3.949113 AGTATCTCGTGAAGTTCTCCTCC 59.051 47.826 4.17 0.00 0.00 4.30
3968 6133 4.732355 GCAGTATCTCGTGAAGTTCTCCTC 60.732 50.000 4.17 0.00 0.00 3.71
3969 6134 3.129638 GCAGTATCTCGTGAAGTTCTCCT 59.870 47.826 4.17 0.00 0.00 3.69
3970 6135 3.129638 AGCAGTATCTCGTGAAGTTCTCC 59.870 47.826 4.17 0.00 0.00 3.71
3971 6136 4.347813 GAGCAGTATCTCGTGAAGTTCTC 58.652 47.826 4.17 0.00 0.00 2.87
3972 6137 3.129638 GGAGCAGTATCTCGTGAAGTTCT 59.870 47.826 4.17 0.00 33.98 3.01
3973 6138 3.440228 GGAGCAGTATCTCGTGAAGTTC 58.560 50.000 0.00 0.00 33.98 3.01
3974 6139 2.159366 CGGAGCAGTATCTCGTGAAGTT 60.159 50.000 0.00 0.00 33.98 2.66
3975 6140 1.402259 CGGAGCAGTATCTCGTGAAGT 59.598 52.381 0.00 0.00 33.98 3.01
3976 6141 1.268794 CCGGAGCAGTATCTCGTGAAG 60.269 57.143 0.00 0.00 33.98 3.02
3977 6142 0.738975 CCGGAGCAGTATCTCGTGAA 59.261 55.000 0.00 0.00 33.98 3.18
3978 6143 1.101635 CCCGGAGCAGTATCTCGTGA 61.102 60.000 0.73 0.00 33.98 4.35
3979 6144 1.101635 TCCCGGAGCAGTATCTCGTG 61.102 60.000 0.73 0.00 33.98 4.35
3980 6145 1.226542 TCCCGGAGCAGTATCTCGT 59.773 57.895 0.73 0.00 33.98 4.18
3981 6146 4.159266 TCCCGGAGCAGTATCTCG 57.841 61.111 0.73 0.00 33.98 4.04


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.