Multiple sequence alignment - TraesCS7D01G271900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G271900 chr7D 100.000 2426 0 0 1 2426 261878558 261880983 0.000000e+00 4481
1 TraesCS7D01G271900 chr7D 84.436 257 38 2 10 265 561188781 561188526 4.000000e-63 252
2 TraesCS7D01G271900 chr7B 93.868 1745 75 17 444 2173 242666413 242664686 0.000000e+00 2601
3 TraesCS7D01G271900 chr7B 87.766 188 5 5 267 444 242666630 242666451 1.140000e-48 204
4 TraesCS7D01G271900 chr7A 93.054 1123 30 17 834 1931 284786345 284787444 0.000000e+00 1598
5 TraesCS7D01G271900 chr7A 91.971 411 17 9 444 840 284783047 284783455 1.630000e-156 562
6 TraesCS7D01G271900 chr7A 80.303 198 37 2 1 197 74732127 74731931 5.400000e-32 148
7 TraesCS7D01G271900 chr7A 78.037 214 40 5 1124 1332 709028776 709028987 7.040000e-26 128
8 TraesCS7D01G271900 chr7A 96.000 75 3 0 370 444 284782935 284783009 3.280000e-24 122
9 TraesCS7D01G271900 chr5D 96.970 264 8 0 1 264 537330898 537330635 6.150000e-121 444
10 TraesCS7D01G271900 chr3B 92.830 265 16 2 1 265 20734282 20734021 4.890000e-102 381
11 TraesCS7D01G271900 chr5B 91.321 265 19 3 1 265 56550486 56550226 2.290000e-95 359
12 TraesCS7D01G271900 chrUn 78.191 188 35 4 14 198 222049064 222049248 5.480000e-22 115
13 TraesCS7D01G271900 chrUn 78.191 188 35 4 14 198 434312406 434312590 5.480000e-22 115
14 TraesCS7D01G271900 chr1B 77.835 194 37 4 14 204 2562890 2562700 5.480000e-22 115
15 TraesCS7D01G271900 chr1B 77.835 194 37 4 14 204 2623634 2623444 5.480000e-22 115


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G271900 chr7D 261878558 261880983 2425 False 4481.000000 4481 100.000 1 2426 1 chr7D.!!$F1 2425
1 TraesCS7D01G271900 chr7B 242664686 242666630 1944 True 1402.500000 2601 90.817 267 2173 2 chr7B.!!$R1 1906
2 TraesCS7D01G271900 chr7A 284782935 284787444 4509 False 760.666667 1598 93.675 370 1931 3 chr7A.!!$F2 1561

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
204 205 0.03563 CTATAGCTGCATGAGGCCCC 60.036 60.0 0.0 0.0 43.89 5.8 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1966 4957 0.039617 TGCCGCGAAATTCCACAAAG 60.04 50.0 8.23 0.0 0.0 2.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 8.587952 TTGATAATGATGTTCATAGGTACACG 57.412 34.615 0.00 0.00 35.76 4.49
30 31 7.947282 TGATAATGATGTTCATAGGTACACGA 58.053 34.615 0.00 0.00 35.76 4.35
31 32 8.082242 TGATAATGATGTTCATAGGTACACGAG 58.918 37.037 0.00 0.00 35.76 4.18
32 33 5.854010 ATGATGTTCATAGGTACACGAGT 57.146 39.130 0.00 0.00 34.88 4.18
33 34 5.654603 TGATGTTCATAGGTACACGAGTT 57.345 39.130 0.00 0.00 0.00 3.01
34 35 5.407502 TGATGTTCATAGGTACACGAGTTG 58.592 41.667 0.00 0.00 0.00 3.16
35 36 4.182693 TGTTCATAGGTACACGAGTTGG 57.817 45.455 0.00 0.00 0.00 3.77
36 37 3.056393 TGTTCATAGGTACACGAGTTGGG 60.056 47.826 0.00 0.00 0.00 4.12
37 38 2.811410 TCATAGGTACACGAGTTGGGT 58.189 47.619 0.00 0.00 0.00 4.51
38 39 2.756760 TCATAGGTACACGAGTTGGGTC 59.243 50.000 0.00 0.00 0.00 4.46
39 40 2.291209 TAGGTACACGAGTTGGGTCA 57.709 50.000 0.00 0.00 0.00 4.02
40 41 1.640917 AGGTACACGAGTTGGGTCAT 58.359 50.000 0.00 0.00 0.00 3.06
41 42 1.275291 AGGTACACGAGTTGGGTCATG 59.725 52.381 0.00 0.00 0.00 3.07
42 43 1.274167 GGTACACGAGTTGGGTCATGA 59.726 52.381 0.00 0.00 0.00 3.07
43 44 2.607187 GTACACGAGTTGGGTCATGAG 58.393 52.381 0.00 0.00 0.00 2.90
44 45 0.321671 ACACGAGTTGGGTCATGAGG 59.678 55.000 0.00 0.00 0.00 3.86
45 46 0.391661 CACGAGTTGGGTCATGAGGG 60.392 60.000 0.00 0.00 0.00 4.30
46 47 1.221840 CGAGTTGGGTCATGAGGGG 59.778 63.158 0.00 0.00 0.00 4.79
47 48 1.264749 CGAGTTGGGTCATGAGGGGA 61.265 60.000 0.00 0.00 0.00 4.81
48 49 0.991920 GAGTTGGGTCATGAGGGGAA 59.008 55.000 0.00 0.00 0.00 3.97
49 50 0.698818 AGTTGGGTCATGAGGGGAAC 59.301 55.000 0.00 0.00 0.00 3.62
67 68 5.830000 GGAACCCAACCAAATATGTCTAC 57.170 43.478 0.00 0.00 0.00 2.59
68 69 4.643334 GGAACCCAACCAAATATGTCTACC 59.357 45.833 0.00 0.00 0.00 3.18
69 70 5.506708 GAACCCAACCAAATATGTCTACCT 58.493 41.667 0.00 0.00 0.00 3.08
70 71 6.353255 GGAACCCAACCAAATATGTCTACCTA 60.353 42.308 0.00 0.00 0.00 3.08
71 72 6.841781 ACCCAACCAAATATGTCTACCTAT 57.158 37.500 0.00 0.00 0.00 2.57
72 73 7.941053 ACCCAACCAAATATGTCTACCTATA 57.059 36.000 0.00 0.00 0.00 1.31
73 74 8.520119 ACCCAACCAAATATGTCTACCTATAT 57.480 34.615 0.00 0.00 0.00 0.86
74 75 8.603304 ACCCAACCAAATATGTCTACCTATATC 58.397 37.037 0.00 0.00 0.00 1.63
75 76 8.826765 CCCAACCAAATATGTCTACCTATATCT 58.173 37.037 0.00 0.00 0.00 1.98
87 88 9.636789 TGTCTACCTATATCTAAAGTACAAGCA 57.363 33.333 0.00 0.00 0.00 3.91
99 100 9.344772 TCTAAAGTACAAGCAAATTTGGTAAGA 57.655 29.630 22.26 10.78 38.04 2.10
102 103 8.816640 AAGTACAAGCAAATTTGGTAAGATTG 57.183 30.769 22.26 17.80 38.04 2.67
103 104 7.951591 AGTACAAGCAAATTTGGTAAGATTGT 58.048 30.769 22.26 21.85 38.04 2.71
104 105 7.867403 AGTACAAGCAAATTTGGTAAGATTGTG 59.133 33.333 24.45 18.68 38.04 3.33
105 106 6.815089 ACAAGCAAATTTGGTAAGATTGTGA 58.185 32.000 22.26 0.00 38.04 3.58
106 107 6.925165 ACAAGCAAATTTGGTAAGATTGTGAG 59.075 34.615 22.26 6.17 38.04 3.51
107 108 5.473039 AGCAAATTTGGTAAGATTGTGAGC 58.527 37.500 20.81 0.32 37.09 4.26
108 109 5.244626 AGCAAATTTGGTAAGATTGTGAGCT 59.755 36.000 20.81 2.74 37.09 4.09
109 110 5.928264 GCAAATTTGGTAAGATTGTGAGCTT 59.072 36.000 19.47 0.00 35.34 3.74
110 111 6.089954 GCAAATTTGGTAAGATTGTGAGCTTC 59.910 38.462 19.47 0.00 32.86 3.86
111 112 5.551760 ATTTGGTAAGATTGTGAGCTTCG 57.448 39.130 0.00 0.00 32.86 3.79
112 113 3.953712 TGGTAAGATTGTGAGCTTCGA 57.046 42.857 0.00 0.00 32.86 3.71
113 114 4.265904 TGGTAAGATTGTGAGCTTCGAA 57.734 40.909 0.00 0.00 32.86 3.71
114 115 4.637276 TGGTAAGATTGTGAGCTTCGAAA 58.363 39.130 0.00 0.00 32.86 3.46
115 116 5.245531 TGGTAAGATTGTGAGCTTCGAAAT 58.754 37.500 0.00 0.00 32.86 2.17
116 117 5.705441 TGGTAAGATTGTGAGCTTCGAAATT 59.295 36.000 0.00 0.00 32.86 1.82
117 118 6.876789 TGGTAAGATTGTGAGCTTCGAAATTA 59.123 34.615 0.00 0.00 32.86 1.40
118 119 7.552687 TGGTAAGATTGTGAGCTTCGAAATTAT 59.447 33.333 0.00 0.00 32.86 1.28
119 120 7.852945 GGTAAGATTGTGAGCTTCGAAATTATG 59.147 37.037 0.00 0.00 32.86 1.90
120 121 7.615582 AAGATTGTGAGCTTCGAAATTATGA 57.384 32.000 0.00 0.00 0.00 2.15
121 122 7.798596 AGATTGTGAGCTTCGAAATTATGAT 57.201 32.000 0.00 0.00 0.00 2.45
122 123 8.218338 AGATTGTGAGCTTCGAAATTATGATT 57.782 30.769 0.00 0.00 0.00 2.57
123 124 8.680903 AGATTGTGAGCTTCGAAATTATGATTT 58.319 29.630 0.00 0.00 38.16 2.17
124 125 8.847444 ATTGTGAGCTTCGAAATTATGATTTC 57.153 30.769 11.87 11.87 44.94 2.17
125 126 7.615582 TGTGAGCTTCGAAATTATGATTTCT 57.384 32.000 17.81 2.25 45.78 2.52
126 127 8.716646 TGTGAGCTTCGAAATTATGATTTCTA 57.283 30.769 17.81 7.12 45.78 2.10
127 128 8.604035 TGTGAGCTTCGAAATTATGATTTCTAC 58.396 33.333 17.81 7.12 45.78 2.59
128 129 7.789759 GTGAGCTTCGAAATTATGATTTCTACG 59.210 37.037 17.81 8.42 45.78 3.51
129 130 6.650372 AGCTTCGAAATTATGATTTCTACGC 58.350 36.000 17.81 15.85 45.78 4.42
130 131 6.480320 AGCTTCGAAATTATGATTTCTACGCT 59.520 34.615 17.05 17.05 45.78 5.07
131 132 6.787986 GCTTCGAAATTATGATTTCTACGCTC 59.212 38.462 17.81 2.71 45.78 5.03
132 133 7.516785 GCTTCGAAATTATGATTTCTACGCTCA 60.517 37.037 17.81 0.00 45.78 4.26
133 134 7.946655 TCGAAATTATGATTTCTACGCTCAT 57.053 32.000 17.81 0.00 45.78 2.90
134 135 9.471084 TTCGAAATTATGATTTCTACGCTCATA 57.529 29.630 17.81 0.00 45.78 2.15
135 136 8.912658 TCGAAATTATGATTTCTACGCTCATAC 58.087 33.333 17.81 0.00 45.78 2.39
136 137 8.699749 CGAAATTATGATTTCTACGCTCATACA 58.300 33.333 17.81 0.00 45.78 2.29
152 153 9.555727 ACGCTCATACATAAAATTACATAAGGT 57.444 29.630 0.00 0.00 0.00 3.50
166 167 9.628500 AATTACATAAGGTAAAACTGGATCTCC 57.372 33.333 0.00 0.00 44.70 3.71
167 168 5.671493 ACATAAGGTAAAACTGGATCTCCG 58.329 41.667 0.00 0.00 39.43 4.63
168 169 2.693267 AGGTAAAACTGGATCTCCGC 57.307 50.000 0.00 0.00 39.43 5.54
169 170 1.134788 AGGTAAAACTGGATCTCCGCG 60.135 52.381 0.00 0.00 39.43 6.46
170 171 0.651031 GTAAAACTGGATCTCCGCGC 59.349 55.000 0.00 0.00 39.43 6.86
171 172 0.461339 TAAAACTGGATCTCCGCGCC 60.461 55.000 0.00 0.00 39.43 6.53
172 173 2.463589 AAAACTGGATCTCCGCGCCA 62.464 55.000 0.00 0.37 39.43 5.69
173 174 2.257409 AAACTGGATCTCCGCGCCAT 62.257 55.000 0.00 0.00 39.43 4.40
174 175 2.109799 CTGGATCTCCGCGCCATT 59.890 61.111 0.00 0.00 39.43 3.16
175 176 1.367471 CTGGATCTCCGCGCCATTA 59.633 57.895 0.00 0.00 39.43 1.90
176 177 0.036952 CTGGATCTCCGCGCCATTAT 60.037 55.000 0.00 0.00 39.43 1.28
177 178 0.396435 TGGATCTCCGCGCCATTATT 59.604 50.000 0.00 0.00 39.43 1.40
178 179 1.202758 TGGATCTCCGCGCCATTATTT 60.203 47.619 0.00 0.00 39.43 1.40
179 180 1.464997 GGATCTCCGCGCCATTATTTC 59.535 52.381 0.00 0.00 0.00 2.17
180 181 2.143122 GATCTCCGCGCCATTATTTCA 58.857 47.619 0.00 0.00 0.00 2.69
181 182 2.254546 TCTCCGCGCCATTATTTCAT 57.745 45.000 0.00 0.00 0.00 2.57
182 183 1.872952 TCTCCGCGCCATTATTTCATG 59.127 47.619 0.00 0.00 0.00 3.07
183 184 1.603802 CTCCGCGCCATTATTTCATGT 59.396 47.619 0.00 0.00 0.00 3.21
184 185 2.805671 CTCCGCGCCATTATTTCATGTA 59.194 45.455 0.00 0.00 0.00 2.29
185 186 2.546368 TCCGCGCCATTATTTCATGTAC 59.454 45.455 0.00 0.00 0.00 2.90
186 187 2.548057 CCGCGCCATTATTTCATGTACT 59.452 45.455 0.00 0.00 0.00 2.73
187 188 3.743911 CCGCGCCATTATTTCATGTACTA 59.256 43.478 0.00 0.00 0.00 1.82
188 189 4.391830 CCGCGCCATTATTTCATGTACTAT 59.608 41.667 0.00 0.00 0.00 2.12
189 190 5.579119 CCGCGCCATTATTTCATGTACTATA 59.421 40.000 0.00 0.00 0.00 1.31
190 191 6.237835 CCGCGCCATTATTTCATGTACTATAG 60.238 42.308 0.00 0.00 0.00 1.31
191 192 6.478588 GCGCCATTATTTCATGTACTATAGC 58.521 40.000 0.00 0.00 0.00 2.97
192 193 6.313905 GCGCCATTATTTCATGTACTATAGCT 59.686 38.462 0.00 0.00 0.00 3.32
193 194 7.674937 GCGCCATTATTTCATGTACTATAGCTG 60.675 40.741 0.00 0.00 0.00 4.24
194 195 7.467623 GCCATTATTTCATGTACTATAGCTGC 58.532 38.462 0.00 0.00 0.00 5.25
195 196 7.119699 GCCATTATTTCATGTACTATAGCTGCA 59.880 37.037 1.02 0.00 0.00 4.41
196 197 9.170734 CCATTATTTCATGTACTATAGCTGCAT 57.829 33.333 1.02 0.39 0.00 3.96
197 198 9.983804 CATTATTTCATGTACTATAGCTGCATG 57.016 33.333 18.42 18.42 38.49 4.06
198 199 9.948964 ATTATTTCATGTACTATAGCTGCATGA 57.051 29.630 20.91 20.91 42.54 3.07
199 200 7.902387 ATTTCATGTACTATAGCTGCATGAG 57.098 36.000 22.26 0.00 44.16 2.90
200 201 5.397142 TCATGTACTATAGCTGCATGAGG 57.603 43.478 20.91 7.11 40.35 3.86
201 202 3.667497 TGTACTATAGCTGCATGAGGC 57.333 47.619 1.02 0.00 45.13 4.70
202 203 2.300152 TGTACTATAGCTGCATGAGGCC 59.700 50.000 1.02 0.00 43.89 5.19
203 204 0.689623 ACTATAGCTGCATGAGGCCC 59.310 55.000 0.00 0.00 43.89 5.80
204 205 0.035630 CTATAGCTGCATGAGGCCCC 60.036 60.000 0.00 0.00 43.89 5.80
205 206 1.492133 TATAGCTGCATGAGGCCCCC 61.492 60.000 0.00 0.00 43.89 5.40
206 207 3.888843 TATAGCTGCATGAGGCCCCCT 62.889 57.143 0.00 0.00 43.89 4.79
218 219 3.015145 CCCCCTCGTCCCCATGTT 61.015 66.667 0.00 0.00 0.00 2.71
219 220 2.272146 CCCCTCGTCCCCATGTTG 59.728 66.667 0.00 0.00 0.00 3.33
220 221 2.297895 CCCCTCGTCCCCATGTTGA 61.298 63.158 0.00 0.00 0.00 3.18
221 222 1.635817 CCCCTCGTCCCCATGTTGAT 61.636 60.000 0.00 0.00 0.00 2.57
222 223 0.464373 CCCTCGTCCCCATGTTGATG 60.464 60.000 0.00 0.00 0.00 3.07
223 224 0.253044 CCTCGTCCCCATGTTGATGT 59.747 55.000 0.00 0.00 0.00 3.06
224 225 1.656652 CTCGTCCCCATGTTGATGTC 58.343 55.000 0.00 0.00 0.00 3.06
225 226 0.980423 TCGTCCCCATGTTGATGTCA 59.020 50.000 0.00 0.00 0.00 3.58
226 227 1.066215 TCGTCCCCATGTTGATGTCAG 60.066 52.381 0.00 0.00 0.00 3.51
227 228 1.339055 CGTCCCCATGTTGATGTCAGT 60.339 52.381 0.00 0.00 0.00 3.41
228 229 2.093711 CGTCCCCATGTTGATGTCAGTA 60.094 50.000 0.00 0.00 0.00 2.74
229 230 3.618752 CGTCCCCATGTTGATGTCAGTAA 60.619 47.826 0.00 0.00 0.00 2.24
230 231 4.526970 GTCCCCATGTTGATGTCAGTAAT 58.473 43.478 0.00 0.00 0.00 1.89
231 232 4.336433 GTCCCCATGTTGATGTCAGTAATG 59.664 45.833 0.00 0.00 0.00 1.90
232 233 3.633525 CCCCATGTTGATGTCAGTAATGG 59.366 47.826 11.03 11.03 34.44 3.16
233 234 3.067180 CCCATGTTGATGTCAGTAATGGC 59.933 47.826 11.94 0.00 33.87 4.40
234 235 3.949754 CCATGTTGATGTCAGTAATGGCT 59.050 43.478 0.00 0.00 30.58 4.75
235 236 4.036027 CCATGTTGATGTCAGTAATGGCTC 59.964 45.833 0.00 0.00 30.58 4.70
236 237 3.609853 TGTTGATGTCAGTAATGGCTCC 58.390 45.455 0.00 0.00 0.00 4.70
237 238 2.945668 GTTGATGTCAGTAATGGCTCCC 59.054 50.000 0.00 0.00 0.00 4.30
238 239 2.481441 TGATGTCAGTAATGGCTCCCT 58.519 47.619 0.00 0.00 0.00 4.20
239 240 2.171237 TGATGTCAGTAATGGCTCCCTG 59.829 50.000 0.00 0.00 0.00 4.45
240 241 0.911769 TGTCAGTAATGGCTCCCTGG 59.088 55.000 0.00 0.00 0.00 4.45
241 242 0.464554 GTCAGTAATGGCTCCCTGGC 60.465 60.000 0.00 0.00 42.18 4.85
248 249 3.001514 GGCTCCCTGGCAATCTGA 58.998 61.111 0.00 0.00 41.37 3.27
249 250 1.153005 GGCTCCCTGGCAATCTGAG 60.153 63.158 0.00 0.00 41.37 3.35
250 251 1.153005 GCTCCCTGGCAATCTGAGG 60.153 63.158 0.00 0.00 0.00 3.86
251 252 1.153005 CTCCCTGGCAATCTGAGGC 60.153 63.158 0.00 0.00 0.00 4.70
257 258 2.045926 GCAATCTGAGGCCACCGT 60.046 61.111 5.01 0.00 0.00 4.83
258 259 2.401766 GCAATCTGAGGCCACCGTG 61.402 63.158 5.01 0.00 0.00 4.94
259 260 1.296392 CAATCTGAGGCCACCGTGA 59.704 57.895 5.01 0.00 0.00 4.35
260 261 0.321564 CAATCTGAGGCCACCGTGAA 60.322 55.000 5.01 0.00 0.00 3.18
261 262 0.036010 AATCTGAGGCCACCGTGAAG 60.036 55.000 5.01 0.00 0.00 3.02
262 263 2.527951 ATCTGAGGCCACCGTGAAGC 62.528 60.000 5.01 0.00 0.00 3.86
263 264 3.241530 TGAGGCCACCGTGAAGCT 61.242 61.111 5.01 0.00 0.00 3.74
264 265 2.435059 GAGGCCACCGTGAAGCTC 60.435 66.667 5.01 0.00 0.00 4.09
265 266 3.240134 GAGGCCACCGTGAAGCTCA 62.240 63.158 5.01 0.00 0.00 4.26
298 299 4.040445 GGCAACTAAACAACACACATGT 57.960 40.909 0.00 0.00 42.46 3.21
322 323 4.443978 AGGTGTATGCAGGCTATCAAAT 57.556 40.909 0.00 0.00 0.00 2.32
325 326 4.136796 GTGTATGCAGGCTATCAAATCCA 58.863 43.478 0.00 0.00 0.00 3.41
326 327 4.023707 GTGTATGCAGGCTATCAAATCCAC 60.024 45.833 0.00 0.00 0.00 4.02
329 330 1.410083 GCAGGCTATCAAATCCACCCA 60.410 52.381 0.00 0.00 0.00 4.51
330 331 2.754186 GCAGGCTATCAAATCCACCCAT 60.754 50.000 0.00 0.00 0.00 4.00
331 332 2.889045 CAGGCTATCAAATCCACCCATG 59.111 50.000 0.00 0.00 0.00 3.66
395 406 0.453390 CTTGATTTTCCTGGCTCGCC 59.547 55.000 0.00 0.00 0.00 5.54
446 457 4.336581 CGAGGACGTGTGCTTCAA 57.663 55.556 0.00 0.00 34.56 2.69
461 510 4.034394 GTGCTTCAAAAGGGCAAAAGAAAG 59.966 41.667 0.00 0.00 37.73 2.62
637 688 2.341911 CCGCGCCCAAACCAAAAT 59.658 55.556 0.00 0.00 0.00 1.82
652 703 9.308000 CCAAACCAAAATAGCCAGGATATTATA 57.692 33.333 10.48 0.00 0.00 0.98
661 716 5.286221 AGCCAGGATATTATATTACCCCGT 58.714 41.667 0.00 0.00 0.00 5.28
805 868 1.662760 AGATCACGATGATGCCGCG 60.663 57.895 0.00 0.00 37.20 6.46
854 3813 2.939460 AACAAATATCAACCAGCGCC 57.061 45.000 2.29 0.00 0.00 6.53
911 3870 3.810896 GCCAACCGCATTCCCGTC 61.811 66.667 0.00 0.00 37.47 4.79
912 3871 2.046314 CCAACCGCATTCCCGTCT 60.046 61.111 0.00 0.00 0.00 4.18
913 3872 2.106683 CCAACCGCATTCCCGTCTC 61.107 63.158 0.00 0.00 0.00 3.36
914 3873 2.106683 CAACCGCATTCCCGTCTCC 61.107 63.158 0.00 0.00 0.00 3.71
915 3874 3.325201 AACCGCATTCCCGTCTCCC 62.325 63.158 0.00 0.00 0.00 4.30
949 3908 2.748641 TTTCCTCTGCTCCCCCGACT 62.749 60.000 0.00 0.00 0.00 4.18
991 3950 5.565637 CGTTCTCTCTTCTCAGATTTGTGGA 60.566 44.000 0.00 0.00 0.00 4.02
1475 4434 2.086869 CCTTGTGAATAGCCACCACTG 58.913 52.381 0.00 0.00 36.26 3.66
1665 4636 3.023946 AGCAGCATCGATCTGATACAC 57.976 47.619 21.53 8.96 34.83 2.90
1694 4665 0.820074 ACATTGTTTTCCGGCGACCA 60.820 50.000 9.30 0.00 0.00 4.02
1807 4778 1.257750 GGGTGGGTGGCCTCAAATTC 61.258 60.000 3.32 0.00 0.00 2.17
1814 4785 0.850883 TGGCCTCAAATTCCCCTCCT 60.851 55.000 3.32 0.00 0.00 3.69
1829 4800 2.307098 CCCTCCTCTGTCAAGGTCAAAT 59.693 50.000 0.00 0.00 37.69 2.32
1830 4801 3.519510 CCCTCCTCTGTCAAGGTCAAATA 59.480 47.826 0.00 0.00 37.69 1.40
1877 4848 0.951040 GGTCCACCTCTTCGCACAAG 60.951 60.000 0.00 0.00 0.00 3.16
1945 4936 1.240256 GCCTCGTCGATCTGGTCTAT 58.760 55.000 0.00 0.00 0.00 1.98
1954 4945 3.560481 TCGATCTGGTCTATCTCAACGAC 59.440 47.826 0.00 0.00 0.00 4.34
1966 4957 8.002665 GTCTATCTCAACGACAAAAAGTGTTAC 58.997 37.037 0.00 0.00 41.96 2.50
1996 4987 4.753516 ATTTCGCGGCAAATAAAATTCG 57.246 36.364 6.13 0.00 0.00 3.34
2005 4996 3.061965 GCAAATAAAATTCGTGCGGCAAT 59.938 39.130 3.23 0.00 0.00 3.56
2020 5011 2.345641 CGGCAATCTCAGAAACGTAGTG 59.654 50.000 0.00 0.00 45.00 2.74
2031 5022 4.584029 GAAACGTAGTGTCATGACATGG 57.416 45.455 30.10 20.39 45.86 3.66
2033 5024 4.794278 AACGTAGTGTCATGACATGGTA 57.206 40.909 30.10 18.77 45.00 3.25
2034 5025 4.106029 ACGTAGTGTCATGACATGGTAC 57.894 45.455 30.10 25.90 43.97 3.34
2036 5027 4.380550 ACGTAGTGTCATGACATGGTACAG 60.381 45.833 30.10 23.68 42.04 2.74
2037 5028 6.783207 ACGTAGTGTCATGACATGGTACAGT 61.783 44.000 30.10 24.15 42.04 3.55
2038 5029 7.520706 ACGTAGTGTCATGACATGGTACAGTA 61.521 42.308 30.10 15.57 42.04 2.74
2039 5030 8.919269 ACGTAGTGTCATGACATGGTACAGTAA 61.919 40.741 30.10 0.72 42.04 2.24
2133 5131 6.766467 GGACCCACGATCTGTTAATTTCTATT 59.234 38.462 0.00 0.00 0.00 1.73
2168 5166 5.557893 GCAACATCTCGTCATGAATCTTAGC 60.558 44.000 0.00 0.00 0.00 3.09
2173 5171 5.511571 TCTCGTCATGAATCTTAGCTAACG 58.488 41.667 0.86 2.21 0.00 3.18
2174 5172 4.607955 TCGTCATGAATCTTAGCTAACGG 58.392 43.478 0.86 0.00 0.00 4.44
2175 5173 4.337274 TCGTCATGAATCTTAGCTAACGGA 59.663 41.667 0.86 0.00 0.00 4.69
2176 5174 4.441415 CGTCATGAATCTTAGCTAACGGAC 59.559 45.833 0.86 4.64 0.00 4.79
2177 5175 5.593010 GTCATGAATCTTAGCTAACGGACT 58.407 41.667 0.86 0.00 0.00 3.85
2178 5176 5.688176 GTCATGAATCTTAGCTAACGGACTC 59.312 44.000 0.86 0.00 0.00 3.36
2179 5177 5.359860 TCATGAATCTTAGCTAACGGACTCA 59.640 40.000 8.70 8.70 0.00 3.41
2180 5178 5.654603 TGAATCTTAGCTAACGGACTCAA 57.345 39.130 0.86 0.00 0.00 3.02
2181 5179 5.651530 TGAATCTTAGCTAACGGACTCAAG 58.348 41.667 0.86 0.00 0.00 3.02
2182 5180 5.185249 TGAATCTTAGCTAACGGACTCAAGT 59.815 40.000 0.86 0.00 0.00 3.16
2183 5181 4.436242 TCTTAGCTAACGGACTCAAGTG 57.564 45.455 0.86 0.00 0.00 3.16
2184 5182 4.077108 TCTTAGCTAACGGACTCAAGTGA 58.923 43.478 0.86 0.00 0.00 3.41
2185 5183 4.521639 TCTTAGCTAACGGACTCAAGTGAA 59.478 41.667 0.86 0.00 0.00 3.18
2186 5184 3.027974 AGCTAACGGACTCAAGTGAAC 57.972 47.619 0.00 0.00 0.00 3.18
2187 5185 1.719780 GCTAACGGACTCAAGTGAACG 59.280 52.381 0.00 0.00 0.00 3.95
2188 5186 2.606308 GCTAACGGACTCAAGTGAACGA 60.606 50.000 0.00 0.00 0.00 3.85
2189 5187 2.589798 AACGGACTCAAGTGAACGAA 57.410 45.000 0.00 0.00 0.00 3.85
2190 5188 2.814280 ACGGACTCAAGTGAACGAAT 57.186 45.000 0.00 0.00 0.00 3.34
2191 5189 2.404215 ACGGACTCAAGTGAACGAATG 58.596 47.619 0.00 0.00 0.00 2.67
2192 5190 2.223971 ACGGACTCAAGTGAACGAATGT 60.224 45.455 0.00 0.00 0.00 2.71
2193 5191 3.005050 ACGGACTCAAGTGAACGAATGTA 59.995 43.478 0.00 0.00 0.00 2.29
2194 5192 4.174009 CGGACTCAAGTGAACGAATGTAT 58.826 43.478 0.00 0.00 0.00 2.29
2195 5193 4.265556 CGGACTCAAGTGAACGAATGTATC 59.734 45.833 0.00 0.00 0.00 2.24
2196 5194 5.168569 GGACTCAAGTGAACGAATGTATCA 58.831 41.667 0.00 0.00 0.00 2.15
2197 5195 5.812642 GGACTCAAGTGAACGAATGTATCAT 59.187 40.000 0.00 0.00 0.00 2.45
2198 5196 6.019479 GGACTCAAGTGAACGAATGTATCATC 60.019 42.308 0.00 0.00 0.00 2.92
2199 5197 5.812642 ACTCAAGTGAACGAATGTATCATCC 59.187 40.000 0.00 0.00 0.00 3.51
2200 5198 5.729510 TCAAGTGAACGAATGTATCATCCA 58.270 37.500 0.00 0.00 0.00 3.41
2201 5199 6.348498 TCAAGTGAACGAATGTATCATCCAT 58.652 36.000 0.00 0.00 0.00 3.41
2202 5200 6.258507 TCAAGTGAACGAATGTATCATCCATG 59.741 38.462 0.00 0.00 0.00 3.66
2203 5201 5.059161 AGTGAACGAATGTATCATCCATGG 58.941 41.667 4.97 4.97 0.00 3.66
2204 5202 5.056480 GTGAACGAATGTATCATCCATGGA 58.944 41.667 18.88 18.88 0.00 3.41
2205 5203 5.527214 GTGAACGAATGTATCATCCATGGAA 59.473 40.000 20.67 2.92 0.00 3.53
2206 5204 6.205464 GTGAACGAATGTATCATCCATGGAAT 59.795 38.462 20.67 11.50 0.00 3.01
2207 5205 6.772233 TGAACGAATGTATCATCCATGGAATT 59.228 34.615 20.67 12.69 0.00 2.17
2208 5206 7.285172 TGAACGAATGTATCATCCATGGAATTT 59.715 33.333 20.67 8.68 0.00 1.82
2209 5207 7.587037 ACGAATGTATCATCCATGGAATTTT 57.413 32.000 20.67 6.80 0.00 1.82
2210 5208 7.651808 ACGAATGTATCATCCATGGAATTTTC 58.348 34.615 20.67 13.18 0.00 2.29
2244 5242 4.706842 TTTTTAGAGCAGAGGTCCTTGT 57.293 40.909 0.00 0.00 0.00 3.16
2245 5243 3.963428 TTTAGAGCAGAGGTCCTTGTC 57.037 47.619 0.00 0.00 0.00 3.18
2246 5244 1.853963 TAGAGCAGAGGTCCTTGTCC 58.146 55.000 0.00 0.00 0.00 4.02
2247 5245 1.216710 GAGCAGAGGTCCTTGTCCG 59.783 63.158 0.00 0.00 0.00 4.79
2248 5246 2.232298 GAGCAGAGGTCCTTGTCCGG 62.232 65.000 0.00 0.00 0.00 5.14
2249 5247 2.266055 CAGAGGTCCTTGTCCGGC 59.734 66.667 0.00 0.00 0.00 6.13
2250 5248 3.003763 AGAGGTCCTTGTCCGGCC 61.004 66.667 0.00 0.00 0.00 6.13
2251 5249 3.003763 GAGGTCCTTGTCCGGCCT 61.004 66.667 0.00 0.00 34.60 5.19
2252 5250 2.529389 AGGTCCTTGTCCGGCCTT 60.529 61.111 0.00 0.00 29.82 4.35
2253 5251 1.229400 AGGTCCTTGTCCGGCCTTA 60.229 57.895 0.00 0.00 29.82 2.69
2254 5252 1.078637 GGTCCTTGTCCGGCCTTAC 60.079 63.158 0.00 0.00 0.00 2.34
2255 5253 1.447314 GTCCTTGTCCGGCCTTACG 60.447 63.158 0.00 0.00 0.00 3.18
2256 5254 1.607178 TCCTTGTCCGGCCTTACGA 60.607 57.895 0.00 0.00 35.47 3.43
2257 5255 1.186917 TCCTTGTCCGGCCTTACGAA 61.187 55.000 0.00 0.00 35.47 3.85
2258 5256 0.107848 CCTTGTCCGGCCTTACGAAT 60.108 55.000 0.00 0.00 35.47 3.34
2259 5257 1.677820 CCTTGTCCGGCCTTACGAATT 60.678 52.381 0.00 0.00 35.47 2.17
2260 5258 2.419021 CCTTGTCCGGCCTTACGAATTA 60.419 50.000 0.00 0.00 35.47 1.40
2261 5259 2.589798 TGTCCGGCCTTACGAATTAG 57.410 50.000 0.00 0.00 35.47 1.73
2262 5260 1.137479 TGTCCGGCCTTACGAATTAGG 59.863 52.381 0.00 0.00 35.47 2.69
2270 5268 4.004196 CCTTACGAATTAGGCCCTTAGG 57.996 50.000 0.00 0.00 0.00 2.69
2271 5269 3.390311 CCTTACGAATTAGGCCCTTAGGT 59.610 47.826 0.00 0.00 34.57 3.08
2272 5270 4.590222 CCTTACGAATTAGGCCCTTAGGTA 59.410 45.833 0.00 0.00 34.57 3.08
2273 5271 5.070847 CCTTACGAATTAGGCCCTTAGGTAA 59.929 44.000 0.00 0.85 34.57 2.85
2274 5272 4.412796 ACGAATTAGGCCCTTAGGTAAC 57.587 45.455 0.00 0.00 34.57 2.50
2275 5273 3.135348 ACGAATTAGGCCCTTAGGTAACC 59.865 47.826 0.00 0.00 34.57 2.85
2276 5274 3.135167 CGAATTAGGCCCTTAGGTAACCA 59.865 47.826 0.00 0.00 34.57 3.67
2277 5275 4.715713 GAATTAGGCCCTTAGGTAACCAG 58.284 47.826 0.00 0.00 34.57 4.00
2278 5276 3.495186 TTAGGCCCTTAGGTAACCAGA 57.505 47.619 0.00 0.00 34.57 3.86
2279 5277 1.880941 AGGCCCTTAGGTAACCAGAG 58.119 55.000 0.00 0.00 34.57 3.35
2280 5278 1.080666 AGGCCCTTAGGTAACCAGAGT 59.919 52.381 0.00 0.00 34.57 3.24
2281 5279 2.316982 AGGCCCTTAGGTAACCAGAGTA 59.683 50.000 0.00 0.00 34.57 2.59
2282 5280 2.433604 GGCCCTTAGGTAACCAGAGTAC 59.566 54.545 0.00 0.00 34.57 2.73
2283 5281 3.102204 GCCCTTAGGTAACCAGAGTACA 58.898 50.000 0.00 0.00 34.57 2.90
2284 5282 3.710165 GCCCTTAGGTAACCAGAGTACAT 59.290 47.826 0.00 0.00 34.57 2.29
2285 5283 4.443034 GCCCTTAGGTAACCAGAGTACATG 60.443 50.000 0.00 0.00 34.57 3.21
2286 5284 4.960469 CCCTTAGGTAACCAGAGTACATGA 59.040 45.833 0.00 0.00 37.17 3.07
2287 5285 5.163437 CCCTTAGGTAACCAGAGTACATGAC 60.163 48.000 0.00 0.00 37.17 3.06
2288 5286 5.421056 CCTTAGGTAACCAGAGTACATGACA 59.579 44.000 0.00 0.00 37.17 3.58
2289 5287 6.070995 CCTTAGGTAACCAGAGTACATGACAA 60.071 42.308 0.00 0.00 37.17 3.18
2290 5288 5.148651 AGGTAACCAGAGTACATGACAAC 57.851 43.478 0.00 0.00 37.17 3.32
2291 5289 4.591498 AGGTAACCAGAGTACATGACAACA 59.409 41.667 0.00 0.00 37.17 3.33
2292 5290 5.071250 AGGTAACCAGAGTACATGACAACAA 59.929 40.000 0.00 0.00 37.17 2.83
2293 5291 5.938125 GGTAACCAGAGTACATGACAACAAT 59.062 40.000 0.00 0.00 0.00 2.71
2294 5292 6.430000 GGTAACCAGAGTACATGACAACAATT 59.570 38.462 0.00 0.00 0.00 2.32
2295 5293 6.959639 AACCAGAGTACATGACAACAATTT 57.040 33.333 0.00 0.00 0.00 1.82
2296 5294 8.995220 GTAACCAGAGTACATGACAACAATTTA 58.005 33.333 0.00 0.00 0.00 1.40
2297 5295 7.435068 ACCAGAGTACATGACAACAATTTAC 57.565 36.000 0.00 0.00 0.00 2.01
2298 5296 6.147164 ACCAGAGTACATGACAACAATTTACG 59.853 38.462 0.00 0.00 0.00 3.18
2299 5297 6.367695 CCAGAGTACATGACAACAATTTACGA 59.632 38.462 0.00 0.00 0.00 3.43
2300 5298 7.064609 CCAGAGTACATGACAACAATTTACGAT 59.935 37.037 0.00 0.00 0.00 3.73
2301 5299 8.110612 CAGAGTACATGACAACAATTTACGATC 58.889 37.037 0.00 0.00 0.00 3.69
2302 5300 7.817478 AGAGTACATGACAACAATTTACGATCA 59.183 33.333 0.00 0.00 0.00 2.92
2303 5301 8.317891 AGTACATGACAACAATTTACGATCAA 57.682 30.769 0.00 0.00 0.00 2.57
2304 5302 8.779303 AGTACATGACAACAATTTACGATCAAA 58.221 29.630 0.00 0.00 0.00 2.69
2305 5303 9.051027 GTACATGACAACAATTTACGATCAAAG 57.949 33.333 0.00 0.00 0.00 2.77
2306 5304 7.870826 ACATGACAACAATTTACGATCAAAGA 58.129 30.769 0.00 0.00 0.00 2.52
2307 5305 8.349245 ACATGACAACAATTTACGATCAAAGAA 58.651 29.630 0.00 0.00 0.00 2.52
2308 5306 8.843733 CATGACAACAATTTACGATCAAAGAAG 58.156 33.333 0.00 0.00 0.00 2.85
2309 5307 8.148807 TGACAACAATTTACGATCAAAGAAGA 57.851 30.769 0.00 0.00 0.00 2.87
2310 5308 8.616942 TGACAACAATTTACGATCAAAGAAGAA 58.383 29.630 0.00 0.00 0.00 2.52
2311 5309 9.445786 GACAACAATTTACGATCAAAGAAGAAA 57.554 29.630 0.00 0.00 0.00 2.52
2312 5310 9.450807 ACAACAATTTACGATCAAAGAAGAAAG 57.549 29.630 0.00 0.00 0.00 2.62
2313 5311 8.905702 CAACAATTTACGATCAAAGAAGAAAGG 58.094 33.333 0.00 0.00 0.00 3.11
2314 5312 8.391075 ACAATTTACGATCAAAGAAGAAAGGA 57.609 30.769 0.00 0.00 0.00 3.36
2315 5313 8.846211 ACAATTTACGATCAAAGAAGAAAGGAA 58.154 29.630 0.00 0.00 0.00 3.36
2316 5314 9.677567 CAATTTACGATCAAAGAAGAAAGGAAA 57.322 29.630 0.00 0.00 0.00 3.13
2318 5316 9.899226 ATTTACGATCAAAGAAGAAAGGAAAAG 57.101 29.630 0.00 0.00 0.00 2.27
2319 5317 6.944234 ACGATCAAAGAAGAAAGGAAAAGT 57.056 33.333 0.00 0.00 0.00 2.66
2320 5318 9.550406 TTACGATCAAAGAAGAAAGGAAAAGTA 57.450 29.630 0.00 0.00 0.00 2.24
2321 5319 8.089115 ACGATCAAAGAAGAAAGGAAAAGTAG 57.911 34.615 0.00 0.00 0.00 2.57
2322 5320 7.173390 ACGATCAAAGAAGAAAGGAAAAGTAGG 59.827 37.037 0.00 0.00 0.00 3.18
2323 5321 7.173390 CGATCAAAGAAGAAAGGAAAAGTAGGT 59.827 37.037 0.00 0.00 0.00 3.08
2324 5322 8.768501 ATCAAAGAAGAAAGGAAAAGTAGGTT 57.231 30.769 0.00 0.00 0.00 3.50
2325 5323 8.221965 TCAAAGAAGAAAGGAAAAGTAGGTTC 57.778 34.615 0.00 0.00 0.00 3.62
2326 5324 6.862711 AAGAAGAAAGGAAAAGTAGGTTCG 57.137 37.500 0.00 0.00 0.00 3.95
2327 5325 6.170846 AGAAGAAAGGAAAAGTAGGTTCGA 57.829 37.500 0.00 0.00 0.00 3.71
2328 5326 6.770542 AGAAGAAAGGAAAAGTAGGTTCGAT 58.229 36.000 0.00 0.00 0.00 3.59
2329 5327 7.904205 AGAAGAAAGGAAAAGTAGGTTCGATA 58.096 34.615 0.00 0.00 0.00 2.92
2330 5328 7.818446 AGAAGAAAGGAAAAGTAGGTTCGATAC 59.182 37.037 0.00 0.00 0.00 2.24
2331 5329 7.001099 AGAAAGGAAAAGTAGGTTCGATACA 57.999 36.000 0.00 0.00 0.00 2.29
2332 5330 7.447594 AGAAAGGAAAAGTAGGTTCGATACAA 58.552 34.615 0.00 0.00 0.00 2.41
2333 5331 7.603024 AGAAAGGAAAAGTAGGTTCGATACAAG 59.397 37.037 0.00 0.00 0.00 3.16
2334 5332 5.731591 AGGAAAAGTAGGTTCGATACAAGG 58.268 41.667 0.00 0.00 0.00 3.61
2335 5333 4.331992 GGAAAAGTAGGTTCGATACAAGGC 59.668 45.833 0.00 0.00 0.00 4.35
2336 5334 2.865343 AGTAGGTTCGATACAAGGCG 57.135 50.000 0.00 0.00 0.00 5.52
2337 5335 1.202382 AGTAGGTTCGATACAAGGCGC 60.202 52.381 0.00 0.00 0.00 6.53
2338 5336 0.818938 TAGGTTCGATACAAGGCGCA 59.181 50.000 10.83 0.00 0.00 6.09
2339 5337 0.036765 AGGTTCGATACAAGGCGCAA 60.037 50.000 10.83 0.00 0.00 4.85
2340 5338 0.800012 GGTTCGATACAAGGCGCAAA 59.200 50.000 10.83 0.00 0.00 3.68
2341 5339 1.202031 GGTTCGATACAAGGCGCAAAG 60.202 52.381 10.83 0.00 0.00 2.77
2342 5340 1.083489 TTCGATACAAGGCGCAAAGG 58.917 50.000 10.83 0.00 0.00 3.11
2351 5349 4.116878 GCGCAAAGGCCAAAAACA 57.883 50.000 5.01 0.00 36.38 2.83
2352 5350 2.388347 GCGCAAAGGCCAAAAACAA 58.612 47.368 5.01 0.00 36.38 2.83
2353 5351 0.304401 GCGCAAAGGCCAAAAACAAG 59.696 50.000 5.01 0.00 36.38 3.16
2354 5352 0.936600 CGCAAAGGCCAAAAACAAGG 59.063 50.000 5.01 0.00 36.38 3.61
2355 5353 1.308047 GCAAAGGCCAAAAACAAGGG 58.692 50.000 5.01 0.00 0.00 3.95
2356 5354 1.134250 GCAAAGGCCAAAAACAAGGGA 60.134 47.619 5.01 0.00 0.00 4.20
2357 5355 2.682269 GCAAAGGCCAAAAACAAGGGAA 60.682 45.455 5.01 0.00 0.00 3.97
2358 5356 3.205338 CAAAGGCCAAAAACAAGGGAAG 58.795 45.455 5.01 0.00 0.00 3.46
2359 5357 0.758734 AGGCCAAAAACAAGGGAAGC 59.241 50.000 5.01 0.00 0.00 3.86
2360 5358 0.599991 GGCCAAAAACAAGGGAAGCG 60.600 55.000 0.00 0.00 0.00 4.68
2361 5359 0.599991 GCCAAAAACAAGGGAAGCGG 60.600 55.000 0.00 0.00 0.00 5.52
2362 5360 0.599991 CCAAAAACAAGGGAAGCGGC 60.600 55.000 0.00 0.00 0.00 6.53
2363 5361 0.939106 CAAAAACAAGGGAAGCGGCG 60.939 55.000 0.51 0.51 0.00 6.46
2364 5362 2.693250 AAAAACAAGGGAAGCGGCGC 62.693 55.000 26.86 26.86 0.00 6.53
2365 5363 4.947147 AACAAGGGAAGCGGCGCA 62.947 61.111 35.02 0.00 0.00 6.09
2366 5364 4.722700 ACAAGGGAAGCGGCGCAT 62.723 61.111 35.02 24.37 0.00 4.73
2367 5365 4.183686 CAAGGGAAGCGGCGCATG 62.184 66.667 35.02 17.52 0.00 4.06
2376 5374 4.781959 CGGCGCATGGCAACTTGG 62.782 66.667 10.83 0.00 46.16 3.61
2377 5375 3.372730 GGCGCATGGCAACTTGGA 61.373 61.111 10.83 0.00 46.16 3.53
2378 5376 2.713967 GGCGCATGGCAACTTGGAT 61.714 57.895 10.83 0.00 46.16 3.41
2379 5377 1.226773 GCGCATGGCAACTTGGATC 60.227 57.895 0.30 0.00 41.81 3.36
2380 5378 1.660560 GCGCATGGCAACTTGGATCT 61.661 55.000 0.30 0.00 41.81 2.75
2381 5379 0.379669 CGCATGGCAACTTGGATCTC 59.620 55.000 0.00 0.00 41.81 2.75
2382 5380 0.743097 GCATGGCAACTTGGATCTCC 59.257 55.000 0.00 0.00 41.81 3.71
2383 5381 1.956636 GCATGGCAACTTGGATCTCCA 60.957 52.381 0.00 0.00 45.94 3.86
2384 5382 2.662866 CATGGCAACTTGGATCTCCAT 58.337 47.619 0.00 0.00 46.97 3.41
2385 5383 2.425143 TGGCAACTTGGATCTCCATC 57.575 50.000 0.00 0.00 46.97 3.51
2386 5384 1.303309 GGCAACTTGGATCTCCATCG 58.697 55.000 0.00 0.00 46.97 3.84
2387 5385 0.659957 GCAACTTGGATCTCCATCGC 59.340 55.000 0.00 0.00 46.97 4.58
2388 5386 0.933097 CAACTTGGATCTCCATCGCG 59.067 55.000 0.00 0.00 46.97 5.87
2389 5387 0.179073 AACTTGGATCTCCATCGCGG 60.179 55.000 6.13 0.00 46.97 6.46
2390 5388 1.043116 ACTTGGATCTCCATCGCGGA 61.043 55.000 6.13 0.00 46.97 5.54
2406 5404 3.121019 GAGACACGCTCCGGCTAT 58.879 61.111 0.00 0.00 37.69 2.97
2407 5405 1.008309 GAGACACGCTCCGGCTATC 60.008 63.158 0.00 0.00 37.69 2.08
2408 5406 1.448922 GAGACACGCTCCGGCTATCT 61.449 60.000 0.00 0.00 37.69 1.98
2409 5407 1.008309 GACACGCTCCGGCTATCTC 60.008 63.158 0.00 0.00 36.09 2.75
2410 5408 1.448922 GACACGCTCCGGCTATCTCT 61.449 60.000 0.00 0.00 36.09 3.10
2411 5409 1.284408 CACGCTCCGGCTATCTCTC 59.716 63.158 0.00 0.00 36.09 3.20
2412 5410 1.899534 ACGCTCCGGCTATCTCTCC 60.900 63.158 0.00 0.00 36.09 3.71
2413 5411 1.602323 CGCTCCGGCTATCTCTCCT 60.602 63.158 0.00 0.00 36.09 3.69
2414 5412 1.175983 CGCTCCGGCTATCTCTCCTT 61.176 60.000 0.00 0.00 36.09 3.36
2415 5413 1.882780 CGCTCCGGCTATCTCTCCTTA 60.883 57.143 0.00 0.00 36.09 2.69
2416 5414 1.816224 GCTCCGGCTATCTCTCCTTAG 59.184 57.143 0.00 0.00 35.22 2.18
2417 5415 1.816224 CTCCGGCTATCTCTCCTTAGC 59.184 57.143 0.00 0.00 40.07 3.09
2421 5419 2.741759 GCTATCTCTCCTTAGCCAGC 57.258 55.000 0.00 0.00 35.80 4.85
2422 5420 2.247358 GCTATCTCTCCTTAGCCAGCT 58.753 52.381 0.00 0.00 35.80 4.24
2423 5421 2.029110 GCTATCTCTCCTTAGCCAGCTG 60.029 54.545 6.78 6.78 35.80 4.24
2424 5422 0.758123 ATCTCTCCTTAGCCAGCTGC 59.242 55.000 8.66 3.91 41.71 5.25
2425 5423 0.615827 TCTCTCCTTAGCCAGCTGCA 60.616 55.000 8.66 0.00 44.83 4.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 9.208022 CGTGTACCTATGAACATCATTATCAAT 57.792 33.333 0.00 0.00 38.26 2.57
4 5 8.417884 TCGTGTACCTATGAACATCATTATCAA 58.582 33.333 0.00 0.00 38.26 2.57
5 6 7.947282 TCGTGTACCTATGAACATCATTATCA 58.053 34.615 0.00 0.00 38.26 2.15
6 7 8.082852 ACTCGTGTACCTATGAACATCATTATC 58.917 37.037 0.00 0.00 38.26 1.75
7 8 7.952671 ACTCGTGTACCTATGAACATCATTAT 58.047 34.615 0.00 0.00 38.26 1.28
8 9 7.342769 ACTCGTGTACCTATGAACATCATTA 57.657 36.000 0.00 0.00 38.26 1.90
9 10 6.222038 ACTCGTGTACCTATGAACATCATT 57.778 37.500 0.00 0.00 38.26 2.57
10 11 5.854010 ACTCGTGTACCTATGAACATCAT 57.146 39.130 0.00 0.00 40.72 2.45
11 12 5.407502 CAACTCGTGTACCTATGAACATCA 58.592 41.667 0.00 0.00 0.00 3.07
12 13 4.804139 CCAACTCGTGTACCTATGAACATC 59.196 45.833 0.00 0.00 0.00 3.06
13 14 4.382685 CCCAACTCGTGTACCTATGAACAT 60.383 45.833 0.00 0.00 0.00 2.71
14 15 3.056393 CCCAACTCGTGTACCTATGAACA 60.056 47.826 0.00 0.00 0.00 3.18
15 16 3.056322 ACCCAACTCGTGTACCTATGAAC 60.056 47.826 0.00 0.00 0.00 3.18
16 17 3.167485 ACCCAACTCGTGTACCTATGAA 58.833 45.455 0.00 0.00 0.00 2.57
17 18 2.756760 GACCCAACTCGTGTACCTATGA 59.243 50.000 0.00 0.00 0.00 2.15
18 19 2.494471 TGACCCAACTCGTGTACCTATG 59.506 50.000 0.00 0.00 0.00 2.23
19 20 2.811410 TGACCCAACTCGTGTACCTAT 58.189 47.619 0.00 0.00 0.00 2.57
20 21 2.291209 TGACCCAACTCGTGTACCTA 57.709 50.000 0.00 0.00 0.00 3.08
21 22 1.275291 CATGACCCAACTCGTGTACCT 59.725 52.381 0.00 0.00 0.00 3.08
22 23 1.274167 TCATGACCCAACTCGTGTACC 59.726 52.381 0.00 0.00 0.00 3.34
23 24 2.607187 CTCATGACCCAACTCGTGTAC 58.393 52.381 0.00 0.00 0.00 2.90
24 25 1.548719 CCTCATGACCCAACTCGTGTA 59.451 52.381 0.00 0.00 0.00 2.90
25 26 0.321671 CCTCATGACCCAACTCGTGT 59.678 55.000 0.00 0.00 0.00 4.49
26 27 0.391661 CCCTCATGACCCAACTCGTG 60.392 60.000 0.00 0.00 0.00 4.35
27 28 1.553690 CCCCTCATGACCCAACTCGT 61.554 60.000 0.00 0.00 0.00 4.18
28 29 1.221840 CCCCTCATGACCCAACTCG 59.778 63.158 0.00 0.00 0.00 4.18
29 30 0.991920 TTCCCCTCATGACCCAACTC 59.008 55.000 0.00 0.00 0.00 3.01
30 31 0.698818 GTTCCCCTCATGACCCAACT 59.301 55.000 0.00 0.00 0.00 3.16
31 32 0.323451 GGTTCCCCTCATGACCCAAC 60.323 60.000 0.00 0.00 0.00 3.77
32 33 2.083715 GGTTCCCCTCATGACCCAA 58.916 57.895 0.00 0.00 0.00 4.12
33 34 3.835134 GGTTCCCCTCATGACCCA 58.165 61.111 0.00 0.00 0.00 4.51
34 35 3.007542 GGGTTCCCCTCATGACCC 58.992 66.667 2.50 2.50 44.45 4.46
35 36 0.323451 GTTGGGTTCCCCTCATGACC 60.323 60.000 5.34 0.00 45.70 4.02
36 37 0.323451 GGTTGGGTTCCCCTCATGAC 60.323 60.000 5.34 0.00 45.70 3.06
37 38 0.774096 TGGTTGGGTTCCCCTCATGA 60.774 55.000 5.34 0.00 45.70 3.07
38 39 0.114168 TTGGTTGGGTTCCCCTCATG 59.886 55.000 5.34 0.00 45.70 3.07
39 40 0.863956 TTTGGTTGGGTTCCCCTCAT 59.136 50.000 5.34 0.00 45.70 2.90
40 41 0.863956 ATTTGGTTGGGTTCCCCTCA 59.136 50.000 5.34 0.00 45.70 3.86
41 42 2.911552 TATTTGGTTGGGTTCCCCTC 57.088 50.000 5.34 0.00 45.70 4.30
42 43 2.385417 ACATATTTGGTTGGGTTCCCCT 59.615 45.455 5.34 0.00 45.70 4.79
43 44 2.764010 GACATATTTGGTTGGGTTCCCC 59.236 50.000 5.34 0.00 45.71 4.81
44 45 3.708451 AGACATATTTGGTTGGGTTCCC 58.292 45.455 0.12 0.12 0.00 3.97
45 46 4.643334 GGTAGACATATTTGGTTGGGTTCC 59.357 45.833 0.00 0.00 0.00 3.62
46 47 5.506708 AGGTAGACATATTTGGTTGGGTTC 58.493 41.667 0.00 0.00 0.00 3.62
47 48 5.530176 AGGTAGACATATTTGGTTGGGTT 57.470 39.130 0.00 0.00 0.00 4.11
48 49 6.841781 ATAGGTAGACATATTTGGTTGGGT 57.158 37.500 0.00 0.00 0.00 4.51
49 50 8.826765 AGATATAGGTAGACATATTTGGTTGGG 58.173 37.037 0.00 0.00 0.00 4.12
61 62 9.636789 TGCTTGTACTTTAGATATAGGTAGACA 57.363 33.333 0.00 0.00 0.00 3.41
73 74 9.344772 TCTTACCAAATTTGCTTGTACTTTAGA 57.655 29.630 12.92 6.82 0.00 2.10
76 77 9.260002 CAATCTTACCAAATTTGCTTGTACTTT 57.740 29.630 12.92 2.00 0.00 2.66
77 78 8.421002 ACAATCTTACCAAATTTGCTTGTACTT 58.579 29.630 12.92 2.14 0.00 2.24
78 79 7.867403 CACAATCTTACCAAATTTGCTTGTACT 59.133 33.333 12.92 0.00 0.00 2.73
79 80 7.865385 TCACAATCTTACCAAATTTGCTTGTAC 59.135 33.333 12.92 0.00 0.00 2.90
80 81 7.946207 TCACAATCTTACCAAATTTGCTTGTA 58.054 30.769 12.92 7.11 0.00 2.41
81 82 6.815089 TCACAATCTTACCAAATTTGCTTGT 58.185 32.000 12.92 8.08 0.00 3.16
82 83 6.128742 GCTCACAATCTTACCAAATTTGCTTG 60.129 38.462 12.92 10.26 0.00 4.01
83 84 5.928264 GCTCACAATCTTACCAAATTTGCTT 59.072 36.000 12.92 4.36 0.00 3.91
84 85 5.244626 AGCTCACAATCTTACCAAATTTGCT 59.755 36.000 12.92 1.68 0.00 3.91
85 86 5.473039 AGCTCACAATCTTACCAAATTTGC 58.527 37.500 12.92 0.00 0.00 3.68
86 87 6.306356 CGAAGCTCACAATCTTACCAAATTTG 59.694 38.462 11.40 11.40 0.00 2.32
87 88 6.206634 TCGAAGCTCACAATCTTACCAAATTT 59.793 34.615 0.00 0.00 0.00 1.82
88 89 5.705441 TCGAAGCTCACAATCTTACCAAATT 59.295 36.000 0.00 0.00 0.00 1.82
89 90 5.245531 TCGAAGCTCACAATCTTACCAAAT 58.754 37.500 0.00 0.00 0.00 2.32
90 91 4.637276 TCGAAGCTCACAATCTTACCAAA 58.363 39.130 0.00 0.00 0.00 3.28
91 92 4.265904 TCGAAGCTCACAATCTTACCAA 57.734 40.909 0.00 0.00 0.00 3.67
92 93 3.953712 TCGAAGCTCACAATCTTACCA 57.046 42.857 0.00 0.00 0.00 3.25
93 94 5.803020 ATTTCGAAGCTCACAATCTTACC 57.197 39.130 0.00 0.00 0.00 2.85
94 95 8.604035 TCATAATTTCGAAGCTCACAATCTTAC 58.396 33.333 0.00 0.00 0.00 2.34
95 96 8.716646 TCATAATTTCGAAGCTCACAATCTTA 57.283 30.769 0.00 0.00 0.00 2.10
96 97 7.615582 TCATAATTTCGAAGCTCACAATCTT 57.384 32.000 0.00 0.00 0.00 2.40
97 98 7.798596 ATCATAATTTCGAAGCTCACAATCT 57.201 32.000 0.00 0.00 0.00 2.40
98 99 8.847444 AAATCATAATTTCGAAGCTCACAATC 57.153 30.769 0.00 0.00 28.70 2.67
99 100 8.847444 GAAATCATAATTTCGAAGCTCACAAT 57.153 30.769 0.00 0.00 40.91 2.71
126 127 9.555727 ACCTTATGTAATTTTATGTATGAGCGT 57.444 29.630 0.00 0.00 0.00 5.07
140 141 9.628500 GGAGATCCAGTTTTACCTTATGTAATT 57.372 33.333 0.00 0.00 36.27 1.40
141 142 7.931948 CGGAGATCCAGTTTTACCTTATGTAAT 59.068 37.037 0.00 0.00 36.13 1.89
142 143 7.270047 CGGAGATCCAGTTTTACCTTATGTAA 58.730 38.462 0.00 0.00 35.10 2.41
143 144 6.684613 GCGGAGATCCAGTTTTACCTTATGTA 60.685 42.308 0.00 0.00 35.14 2.29
144 145 5.671493 CGGAGATCCAGTTTTACCTTATGT 58.329 41.667 0.00 0.00 35.14 2.29
145 146 4.511826 GCGGAGATCCAGTTTTACCTTATG 59.488 45.833 0.00 0.00 35.14 1.90
146 147 4.704965 GCGGAGATCCAGTTTTACCTTAT 58.295 43.478 0.00 0.00 35.14 1.73
147 148 3.429822 CGCGGAGATCCAGTTTTACCTTA 60.430 47.826 0.00 0.00 35.14 2.69
148 149 2.677037 CGCGGAGATCCAGTTTTACCTT 60.677 50.000 0.00 0.00 35.14 3.50
149 150 1.134788 CGCGGAGATCCAGTTTTACCT 60.135 52.381 0.00 0.00 35.14 3.08
150 151 1.287425 CGCGGAGATCCAGTTTTACC 58.713 55.000 0.00 0.00 35.14 2.85
151 152 0.651031 GCGCGGAGATCCAGTTTTAC 59.349 55.000 8.83 0.00 35.14 2.01
152 153 0.461339 GGCGCGGAGATCCAGTTTTA 60.461 55.000 8.83 0.00 35.14 1.52
153 154 1.745489 GGCGCGGAGATCCAGTTTT 60.745 57.895 8.83 0.00 35.14 2.43
154 155 2.125106 GGCGCGGAGATCCAGTTT 60.125 61.111 8.83 0.00 35.14 2.66
155 156 2.257409 AATGGCGCGGAGATCCAGTT 62.257 55.000 8.83 0.35 34.28 3.16
156 157 1.399744 TAATGGCGCGGAGATCCAGT 61.400 55.000 8.83 8.16 34.28 4.00
157 158 0.036952 ATAATGGCGCGGAGATCCAG 60.037 55.000 8.83 0.00 34.28 3.86
158 159 0.396435 AATAATGGCGCGGAGATCCA 59.604 50.000 8.83 6.54 35.17 3.41
159 160 1.464997 GAAATAATGGCGCGGAGATCC 59.535 52.381 8.83 0.00 0.00 3.36
160 161 2.143122 TGAAATAATGGCGCGGAGATC 58.857 47.619 8.83 0.00 0.00 2.75
161 162 2.254546 TGAAATAATGGCGCGGAGAT 57.745 45.000 8.83 0.00 0.00 2.75
162 163 1.872952 CATGAAATAATGGCGCGGAGA 59.127 47.619 8.83 0.00 0.00 3.71
163 164 1.603802 ACATGAAATAATGGCGCGGAG 59.396 47.619 8.83 0.00 31.46 4.63
164 165 1.674359 ACATGAAATAATGGCGCGGA 58.326 45.000 8.83 0.00 31.46 5.54
165 166 2.548057 AGTACATGAAATAATGGCGCGG 59.452 45.455 8.83 0.00 31.46 6.46
166 167 3.878086 AGTACATGAAATAATGGCGCG 57.122 42.857 0.00 0.00 31.46 6.86
167 168 6.313905 AGCTATAGTACATGAAATAATGGCGC 59.686 38.462 0.00 0.00 31.46 6.53
168 169 7.674937 GCAGCTATAGTACATGAAATAATGGCG 60.675 40.741 0.00 0.00 31.46 5.69
169 170 7.119699 TGCAGCTATAGTACATGAAATAATGGC 59.880 37.037 0.00 0.09 31.46 4.40
170 171 8.552083 TGCAGCTATAGTACATGAAATAATGG 57.448 34.615 0.00 0.00 31.46 3.16
171 172 9.983804 CATGCAGCTATAGTACATGAAATAATG 57.016 33.333 18.97 0.00 40.39 1.90
172 173 9.948964 TCATGCAGCTATAGTACATGAAATAAT 57.051 29.630 21.77 0.00 42.93 1.28
173 174 9.428097 CTCATGCAGCTATAGTACATGAAATAA 57.572 33.333 23.03 10.32 44.59 1.40
174 175 8.037166 CCTCATGCAGCTATAGTACATGAAATA 58.963 37.037 23.03 10.56 44.59 1.40
175 176 6.877855 CCTCATGCAGCTATAGTACATGAAAT 59.122 38.462 23.03 7.18 44.59 2.17
176 177 6.226052 CCTCATGCAGCTATAGTACATGAAA 58.774 40.000 23.03 11.24 44.59 2.69
177 178 5.787380 CCTCATGCAGCTATAGTACATGAA 58.213 41.667 23.03 13.82 44.59 2.57
178 179 4.322273 GCCTCATGCAGCTATAGTACATGA 60.322 45.833 22.20 22.20 43.48 3.07
179 180 3.931468 GCCTCATGCAGCTATAGTACATG 59.069 47.826 18.21 18.21 40.77 3.21
180 181 3.055530 GGCCTCATGCAGCTATAGTACAT 60.056 47.826 0.00 0.46 43.89 2.29
181 182 2.300152 GGCCTCATGCAGCTATAGTACA 59.700 50.000 0.00 0.00 43.89 2.90
182 183 2.354203 GGGCCTCATGCAGCTATAGTAC 60.354 54.545 0.84 0.00 43.89 2.73
183 184 1.902508 GGGCCTCATGCAGCTATAGTA 59.097 52.381 0.84 0.00 43.89 1.82
184 185 0.689623 GGGCCTCATGCAGCTATAGT 59.310 55.000 0.84 0.00 43.89 2.12
185 186 0.035630 GGGGCCTCATGCAGCTATAG 60.036 60.000 0.84 0.00 43.89 1.31
186 187 1.492133 GGGGGCCTCATGCAGCTATA 61.492 60.000 4.16 0.00 43.89 1.31
187 188 2.838467 GGGGGCCTCATGCAGCTAT 61.838 63.158 4.16 0.00 43.89 2.97
188 189 3.492353 GGGGGCCTCATGCAGCTA 61.492 66.667 4.16 0.00 43.89 3.32
201 202 3.015145 AACATGGGGACGAGGGGG 61.015 66.667 0.00 0.00 0.00 5.40
202 203 1.635817 ATCAACATGGGGACGAGGGG 61.636 60.000 0.00 0.00 0.00 4.79
203 204 0.464373 CATCAACATGGGGACGAGGG 60.464 60.000 0.00 0.00 0.00 4.30
204 205 0.253044 ACATCAACATGGGGACGAGG 59.747 55.000 0.00 0.00 33.82 4.63
205 206 1.066215 TGACATCAACATGGGGACGAG 60.066 52.381 0.00 0.00 33.82 4.18
206 207 0.980423 TGACATCAACATGGGGACGA 59.020 50.000 0.00 0.00 33.82 4.20
207 208 1.339055 ACTGACATCAACATGGGGACG 60.339 52.381 0.00 0.00 33.82 4.79
208 209 2.496899 ACTGACATCAACATGGGGAC 57.503 50.000 0.00 0.00 33.82 4.46
209 210 4.525996 CATTACTGACATCAACATGGGGA 58.474 43.478 0.00 0.00 33.82 4.81
210 211 3.633525 CCATTACTGACATCAACATGGGG 59.366 47.826 0.00 0.00 33.82 4.96
211 212 3.067180 GCCATTACTGACATCAACATGGG 59.933 47.826 12.39 0.00 33.82 4.00
212 213 3.949754 AGCCATTACTGACATCAACATGG 59.050 43.478 0.00 8.40 33.82 3.66
213 214 4.036027 GGAGCCATTACTGACATCAACATG 59.964 45.833 0.00 0.00 35.92 3.21
214 215 4.202441 GGAGCCATTACTGACATCAACAT 58.798 43.478 0.00 0.00 0.00 2.71
215 216 3.609853 GGAGCCATTACTGACATCAACA 58.390 45.455 0.00 0.00 0.00 3.33
216 217 2.945668 GGGAGCCATTACTGACATCAAC 59.054 50.000 0.00 0.00 0.00 3.18
217 218 2.846206 AGGGAGCCATTACTGACATCAA 59.154 45.455 0.00 0.00 0.00 2.57
218 219 2.171237 CAGGGAGCCATTACTGACATCA 59.829 50.000 0.00 0.00 32.86 3.07
219 220 2.486191 CCAGGGAGCCATTACTGACATC 60.486 54.545 0.00 0.00 32.86 3.06
220 221 1.492176 CCAGGGAGCCATTACTGACAT 59.508 52.381 0.00 0.00 32.86 3.06
221 222 0.911769 CCAGGGAGCCATTACTGACA 59.088 55.000 0.00 0.00 32.86 3.58
222 223 0.464554 GCCAGGGAGCCATTACTGAC 60.465 60.000 0.00 0.00 32.86 3.51
223 224 0.913934 TGCCAGGGAGCCATTACTGA 60.914 55.000 0.00 0.00 32.86 3.41
224 225 0.034186 TTGCCAGGGAGCCATTACTG 60.034 55.000 0.00 0.00 0.00 2.74
225 226 0.929244 ATTGCCAGGGAGCCATTACT 59.071 50.000 0.00 0.00 0.00 2.24
226 227 1.133668 AGATTGCCAGGGAGCCATTAC 60.134 52.381 0.00 0.00 0.00 1.89
227 228 1.133699 CAGATTGCCAGGGAGCCATTA 60.134 52.381 0.00 0.00 0.00 1.90
228 229 0.396695 CAGATTGCCAGGGAGCCATT 60.397 55.000 0.00 0.00 0.00 3.16
229 230 1.229359 CAGATTGCCAGGGAGCCAT 59.771 57.895 0.00 0.00 0.00 4.40
230 231 1.918467 CTCAGATTGCCAGGGAGCCA 61.918 60.000 0.00 0.00 0.00 4.75
231 232 1.153005 CTCAGATTGCCAGGGAGCC 60.153 63.158 0.00 0.00 0.00 4.70
232 233 1.153005 CCTCAGATTGCCAGGGAGC 60.153 63.158 0.00 0.00 0.00 4.70
233 234 1.153005 GCCTCAGATTGCCAGGGAG 60.153 63.158 0.00 0.00 0.00 4.30
234 235 3.001514 GCCTCAGATTGCCAGGGA 58.998 61.111 0.00 0.00 0.00 4.20
240 241 2.045926 ACGGTGGCCTCAGATTGC 60.046 61.111 12.05 0.00 0.00 3.56
241 242 0.321564 TTCACGGTGGCCTCAGATTG 60.322 55.000 12.05 0.89 0.00 2.67
242 243 0.036010 CTTCACGGTGGCCTCAGATT 60.036 55.000 12.05 0.00 0.00 2.40
243 244 1.599047 CTTCACGGTGGCCTCAGAT 59.401 57.895 12.05 0.00 0.00 2.90
244 245 3.059982 CTTCACGGTGGCCTCAGA 58.940 61.111 12.05 1.07 0.00 3.27
245 246 2.743928 GCTTCACGGTGGCCTCAG 60.744 66.667 8.50 3.27 0.00 3.35
246 247 3.240134 GAGCTTCACGGTGGCCTCA 62.240 63.158 8.50 0.00 0.00 3.86
247 248 2.435059 GAGCTTCACGGTGGCCTC 60.435 66.667 8.50 0.00 0.00 4.70
248 249 3.241530 TGAGCTTCACGGTGGCCT 61.242 61.111 8.50 2.23 0.00 5.19
249 250 3.050275 GTGAGCTTCACGGTGGCC 61.050 66.667 8.50 0.00 37.67 5.36
257 258 3.753272 GCCTTCATTTACTGTGAGCTTCA 59.247 43.478 0.00 0.00 0.00 3.02
258 259 3.753272 TGCCTTCATTTACTGTGAGCTTC 59.247 43.478 0.00 0.00 0.00 3.86
259 260 3.754965 TGCCTTCATTTACTGTGAGCTT 58.245 40.909 0.00 0.00 0.00 3.74
260 261 3.423539 TGCCTTCATTTACTGTGAGCT 57.576 42.857 0.00 0.00 0.00 4.09
261 262 3.503748 AGTTGCCTTCATTTACTGTGAGC 59.496 43.478 0.00 0.00 0.00 4.26
262 263 6.801539 TTAGTTGCCTTCATTTACTGTGAG 57.198 37.500 0.00 0.00 0.00 3.51
263 264 6.544197 TGTTTAGTTGCCTTCATTTACTGTGA 59.456 34.615 0.00 0.00 0.00 3.58
264 265 6.734137 TGTTTAGTTGCCTTCATTTACTGTG 58.266 36.000 0.00 0.00 0.00 3.66
265 266 6.952773 TGTTTAGTTGCCTTCATTTACTGT 57.047 33.333 0.00 0.00 0.00 3.55
294 295 3.282021 AGCCTGCATACACCTTAACATG 58.718 45.455 0.00 0.00 0.00 3.21
295 296 3.652057 AGCCTGCATACACCTTAACAT 57.348 42.857 0.00 0.00 0.00 2.71
296 297 4.163268 TGATAGCCTGCATACACCTTAACA 59.837 41.667 0.00 0.00 0.00 2.41
297 298 4.703897 TGATAGCCTGCATACACCTTAAC 58.296 43.478 0.00 0.00 0.00 2.01
298 299 5.366482 TTGATAGCCTGCATACACCTTAA 57.634 39.130 0.00 0.00 0.00 1.85
299 300 5.366482 TTTGATAGCCTGCATACACCTTA 57.634 39.130 0.00 0.00 0.00 2.69
300 301 3.931907 TTGATAGCCTGCATACACCTT 57.068 42.857 0.00 0.00 0.00 3.50
301 302 3.931907 TTTGATAGCCTGCATACACCT 57.068 42.857 0.00 0.00 0.00 4.00
325 326 4.080526 GTCTCCTATGTAAACACCATGGGT 60.081 45.833 18.09 8.43 40.67 4.51
326 327 4.164221 AGTCTCCTATGTAAACACCATGGG 59.836 45.833 18.09 7.72 41.05 4.00
329 330 4.441634 GCGAGTCTCCTATGTAAACACCAT 60.442 45.833 0.00 0.00 0.00 3.55
330 331 3.119245 GCGAGTCTCCTATGTAAACACCA 60.119 47.826 0.00 0.00 0.00 4.17
331 332 3.130693 AGCGAGTCTCCTATGTAAACACC 59.869 47.826 0.00 0.00 0.00 4.16
444 455 4.122046 CCAGACTTTCTTTTGCCCTTTTG 58.878 43.478 0.00 0.00 0.00 2.44
445 456 3.432186 GCCAGACTTTCTTTTGCCCTTTT 60.432 43.478 0.00 0.00 0.00 2.27
446 457 2.103094 GCCAGACTTTCTTTTGCCCTTT 59.897 45.455 0.00 0.00 0.00 3.11
461 510 5.994668 CCTAATTTCCATCTAGAAGCCAGAC 59.005 44.000 0.00 0.00 0.00 3.51
637 688 6.446451 ACGGGGTAATATAATATCCTGGCTA 58.554 40.000 10.21 0.00 36.84 3.93
661 716 0.887836 CCGGGATCTCCACGTCGATA 60.888 60.000 0.00 0.00 37.91 2.92
703 758 0.984230 GCCTACCATAGCCATGCCTA 59.016 55.000 0.00 0.00 0.00 3.93
752 807 3.404141 GACAGAGGGAGCGAGCGAC 62.404 68.421 0.00 0.00 0.00 5.19
832 3791 3.612423 GGCGCTGGTTGATATTTGTTTTC 59.388 43.478 7.64 0.00 0.00 2.29
861 3820 2.904011 TGTTTTTATAACGCAGCGGG 57.096 45.000 21.15 0.00 0.00 6.13
911 3870 0.618968 AAGTAGGCAGGTGAGGGGAG 60.619 60.000 0.00 0.00 0.00 4.30
912 3871 0.178873 AAAGTAGGCAGGTGAGGGGA 60.179 55.000 0.00 0.00 0.00 4.81
913 3872 0.698818 AAAAGTAGGCAGGTGAGGGG 59.301 55.000 0.00 0.00 0.00 4.79
914 3873 1.340114 GGAAAAGTAGGCAGGTGAGGG 60.340 57.143 0.00 0.00 0.00 4.30
915 3874 1.630878 AGGAAAAGTAGGCAGGTGAGG 59.369 52.381 0.00 0.00 0.00 3.86
949 3908 1.453379 GGGAGAGACGGACGGATGA 60.453 63.158 0.00 0.00 0.00 2.92
1654 4620 2.617308 TCGACCCGAAGTGTATCAGATC 59.383 50.000 0.00 0.00 31.06 2.75
1665 4636 2.095919 GGAAAACAATGTCGACCCGAAG 60.096 50.000 14.12 1.08 37.72 3.79
1694 4665 2.222027 CCAAGAAACAGAGACGGCTTT 58.778 47.619 0.00 0.00 0.00 3.51
1807 4778 0.545309 TGACCTTGACAGAGGAGGGG 60.545 60.000 9.74 0.00 39.25 4.79
1814 4785 6.703165 CGATGATCATATTTGACCTTGACAGA 59.297 38.462 8.54 0.00 33.85 3.41
1857 4828 1.691195 TTGTGCGAAGAGGTGGACCA 61.691 55.000 0.00 0.00 38.89 4.02
1877 4848 8.846211 TCCAAATTGCTAGTGGTATATTTAAGC 58.154 33.333 0.00 0.00 33.88 3.09
1945 4936 6.730960 AAGTAACACTTTTTGTCGTTGAGA 57.269 33.333 0.00 0.00 37.51 3.27
1954 4945 8.107564 CGAAATTCCACAAAGTAACACTTTTTG 58.892 33.333 9.81 9.81 45.38 2.44
1966 4957 0.039617 TGCCGCGAAATTCCACAAAG 60.040 50.000 8.23 0.00 0.00 2.77
1996 4987 0.179215 CGTTTCTGAGATTGCCGCAC 60.179 55.000 0.00 0.00 0.00 5.34
2005 4996 4.277423 TGTCATGACACTACGTTTCTGAGA 59.723 41.667 24.56 0.00 36.21 3.27
2020 5011 8.551205 CACATAATTACTGTACCATGTCATGAC 58.449 37.037 19.27 19.27 0.00 3.06
2023 5014 6.202762 CGCACATAATTACTGTACCATGTCAT 59.797 38.462 0.00 0.00 0.00 3.06
2030 5021 9.991388 TTAAAAATCGCACATAATTACTGTACC 57.009 29.630 0.00 0.00 0.00 3.34
2080 5078 8.587608 TCCATAAAGTCAGAAGCAATTTGATTT 58.412 29.630 0.86 0.00 0.00 2.17
2133 5131 3.814842 ACGAGATGTTGCACAAATGAGAA 59.185 39.130 0.00 0.00 0.00 2.87
2140 5138 2.765122 TCATGACGAGATGTTGCACAA 58.235 42.857 0.00 0.00 0.00 3.33
2168 5166 3.278367 TCGTTCACTTGAGTCCGTTAG 57.722 47.619 0.00 0.00 0.00 2.34
2173 5171 5.168569 TGATACATTCGTTCACTTGAGTCC 58.831 41.667 0.00 0.00 0.00 3.85
2174 5172 6.019479 GGATGATACATTCGTTCACTTGAGTC 60.019 42.308 0.00 0.00 0.00 3.36
2175 5173 5.812642 GGATGATACATTCGTTCACTTGAGT 59.187 40.000 0.00 0.00 0.00 3.41
2176 5174 5.812127 TGGATGATACATTCGTTCACTTGAG 59.188 40.000 0.00 0.00 0.00 3.02
2177 5175 5.729510 TGGATGATACATTCGTTCACTTGA 58.270 37.500 0.00 0.00 0.00 3.02
2178 5176 6.424683 CATGGATGATACATTCGTTCACTTG 58.575 40.000 0.00 0.00 31.41 3.16
2179 5177 5.528690 CCATGGATGATACATTCGTTCACTT 59.471 40.000 5.56 0.00 31.41 3.16
2180 5178 5.059161 CCATGGATGATACATTCGTTCACT 58.941 41.667 5.56 0.00 31.41 3.41
2181 5179 5.056480 TCCATGGATGATACATTCGTTCAC 58.944 41.667 11.44 0.00 31.41 3.18
2182 5180 5.289083 TCCATGGATGATACATTCGTTCA 57.711 39.130 11.44 0.00 33.24 3.18
2183 5181 6.808008 ATTCCATGGATGATACATTCGTTC 57.192 37.500 17.06 0.00 0.00 3.95
2184 5182 7.587037 AAATTCCATGGATGATACATTCGTT 57.413 32.000 17.06 0.00 0.00 3.85
2185 5183 7.255590 GGAAAATTCCATGGATGATACATTCGT 60.256 37.037 17.06 3.15 46.76 3.85
2186 5184 7.086376 GGAAAATTCCATGGATGATACATTCG 58.914 38.462 17.06 0.00 46.76 3.34
2223 5221 4.505039 GGACAAGGACCTCTGCTCTAAAAA 60.505 45.833 0.00 0.00 0.00 1.94
2224 5222 3.008049 GGACAAGGACCTCTGCTCTAAAA 59.992 47.826 0.00 0.00 0.00 1.52
2225 5223 2.567615 GGACAAGGACCTCTGCTCTAAA 59.432 50.000 0.00 0.00 0.00 1.85
2226 5224 2.180276 GGACAAGGACCTCTGCTCTAA 58.820 52.381 0.00 0.00 0.00 2.10
2227 5225 1.853963 GGACAAGGACCTCTGCTCTA 58.146 55.000 0.00 0.00 0.00 2.43
2228 5226 1.254284 CGGACAAGGACCTCTGCTCT 61.254 60.000 0.00 0.00 0.00 4.09
2229 5227 1.216710 CGGACAAGGACCTCTGCTC 59.783 63.158 0.00 0.00 0.00 4.26
2230 5228 2.286523 CCGGACAAGGACCTCTGCT 61.287 63.158 0.00 0.00 0.00 4.24
2231 5229 2.266055 CCGGACAAGGACCTCTGC 59.734 66.667 0.00 0.00 0.00 4.26
2232 5230 2.266055 GCCGGACAAGGACCTCTG 59.734 66.667 5.05 0.00 0.00 3.35
2233 5231 3.003763 GGCCGGACAAGGACCTCT 61.004 66.667 5.05 0.00 31.48 3.69
2234 5232 1.262640 TAAGGCCGGACAAGGACCTC 61.263 60.000 11.69 0.00 41.33 3.85
2235 5233 1.229400 TAAGGCCGGACAAGGACCT 60.229 57.895 11.69 0.00 41.33 3.85
2236 5234 1.078637 GTAAGGCCGGACAAGGACC 60.079 63.158 11.69 0.00 41.33 4.46
2237 5235 1.447314 CGTAAGGCCGGACAAGGAC 60.447 63.158 11.69 0.00 40.48 3.85
2238 5236 1.186917 TTCGTAAGGCCGGACAAGGA 61.187 55.000 11.69 5.35 38.47 3.36
2239 5237 0.107848 ATTCGTAAGGCCGGACAAGG 60.108 55.000 11.69 2.40 38.47 3.61
2240 5238 1.734163 AATTCGTAAGGCCGGACAAG 58.266 50.000 11.69 0.00 38.47 3.16
2241 5239 2.419021 CCTAATTCGTAAGGCCGGACAA 60.419 50.000 11.69 0.00 38.47 3.18
2242 5240 1.137479 CCTAATTCGTAAGGCCGGACA 59.863 52.381 11.69 0.00 38.47 4.02
2243 5241 1.861971 CCTAATTCGTAAGGCCGGAC 58.138 55.000 5.05 0.00 38.47 4.79
2249 5247 3.390311 ACCTAAGGGCCTAATTCGTAAGG 59.610 47.826 6.41 6.53 35.63 2.69
2250 5248 4.684484 ACCTAAGGGCCTAATTCGTAAG 57.316 45.455 6.41 0.00 35.63 2.34
2251 5249 5.163311 GGTTACCTAAGGGCCTAATTCGTAA 60.163 44.000 6.41 6.98 35.63 3.18
2252 5250 4.344968 GGTTACCTAAGGGCCTAATTCGTA 59.655 45.833 6.41 0.35 35.63 3.43
2253 5251 3.135348 GGTTACCTAAGGGCCTAATTCGT 59.865 47.826 6.41 1.42 35.63 3.85
2254 5252 3.135167 TGGTTACCTAAGGGCCTAATTCG 59.865 47.826 6.41 0.00 35.63 3.34
2255 5253 4.411212 TCTGGTTACCTAAGGGCCTAATTC 59.589 45.833 6.41 0.00 35.63 2.17
2256 5254 4.377134 TCTGGTTACCTAAGGGCCTAATT 58.623 43.478 6.41 0.00 35.63 1.40
2257 5255 3.974642 CTCTGGTTACCTAAGGGCCTAAT 59.025 47.826 6.41 0.00 35.63 1.73
2258 5256 3.246240 ACTCTGGTTACCTAAGGGCCTAA 60.246 47.826 6.41 0.00 35.63 2.69
2259 5257 2.316982 ACTCTGGTTACCTAAGGGCCTA 59.683 50.000 6.41 0.00 35.63 3.93
2260 5258 1.080666 ACTCTGGTTACCTAAGGGCCT 59.919 52.381 0.00 0.00 35.63 5.19
2261 5259 1.581223 ACTCTGGTTACCTAAGGGCC 58.419 55.000 2.07 0.00 35.63 5.80
2262 5260 3.102204 TGTACTCTGGTTACCTAAGGGC 58.898 50.000 2.07 0.00 35.63 5.19
2263 5261 4.960469 TCATGTACTCTGGTTACCTAAGGG 59.040 45.833 2.07 0.00 38.88 3.95
2264 5262 5.421056 TGTCATGTACTCTGGTTACCTAAGG 59.579 44.000 2.07 0.00 0.00 2.69
2265 5263 6.525578 TGTCATGTACTCTGGTTACCTAAG 57.474 41.667 2.07 2.51 0.00 2.18
2266 5264 6.268158 TGTTGTCATGTACTCTGGTTACCTAA 59.732 38.462 2.07 0.00 0.00 2.69
2267 5265 5.776208 TGTTGTCATGTACTCTGGTTACCTA 59.224 40.000 2.07 0.00 0.00 3.08
2268 5266 4.591498 TGTTGTCATGTACTCTGGTTACCT 59.409 41.667 2.07 0.00 0.00 3.08
2269 5267 4.890088 TGTTGTCATGTACTCTGGTTACC 58.110 43.478 0.00 0.00 0.00 2.85
2270 5268 7.435068 AATTGTTGTCATGTACTCTGGTTAC 57.565 36.000 0.00 0.00 0.00 2.50
2271 5269 8.995220 GTAAATTGTTGTCATGTACTCTGGTTA 58.005 33.333 0.00 0.00 0.00 2.85
2272 5270 6.959639 AAATTGTTGTCATGTACTCTGGTT 57.040 33.333 0.00 0.00 0.00 3.67
2273 5271 6.147164 CGTAAATTGTTGTCATGTACTCTGGT 59.853 38.462 0.00 0.00 0.00 4.00
2274 5272 6.367695 TCGTAAATTGTTGTCATGTACTCTGG 59.632 38.462 0.00 0.00 0.00 3.86
2275 5273 7.346208 TCGTAAATTGTTGTCATGTACTCTG 57.654 36.000 0.00 0.00 0.00 3.35
2276 5274 7.817478 TGATCGTAAATTGTTGTCATGTACTCT 59.183 33.333 0.00 0.00 0.00 3.24
2277 5275 7.959733 TGATCGTAAATTGTTGTCATGTACTC 58.040 34.615 0.00 0.00 0.00 2.59
2278 5276 7.899178 TGATCGTAAATTGTTGTCATGTACT 57.101 32.000 0.00 0.00 0.00 2.73
2279 5277 8.942669 TTTGATCGTAAATTGTTGTCATGTAC 57.057 30.769 0.00 0.00 0.00 2.90
2280 5278 8.994170 TCTTTGATCGTAAATTGTTGTCATGTA 58.006 29.630 0.00 0.00 0.00 2.29
2281 5279 7.870826 TCTTTGATCGTAAATTGTTGTCATGT 58.129 30.769 0.00 0.00 0.00 3.21
2282 5280 8.726650 TTCTTTGATCGTAAATTGTTGTCATG 57.273 30.769 0.00 0.00 0.00 3.07
2283 5281 8.783093 TCTTCTTTGATCGTAAATTGTTGTCAT 58.217 29.630 0.00 0.00 0.00 3.06
2284 5282 8.148807 TCTTCTTTGATCGTAAATTGTTGTCA 57.851 30.769 0.00 0.00 0.00 3.58
2285 5283 9.445786 TTTCTTCTTTGATCGTAAATTGTTGTC 57.554 29.630 0.00 0.00 0.00 3.18
2286 5284 9.450807 CTTTCTTCTTTGATCGTAAATTGTTGT 57.549 29.630 0.00 0.00 0.00 3.32
2287 5285 8.905702 CCTTTCTTCTTTGATCGTAAATTGTTG 58.094 33.333 0.00 0.00 0.00 3.33
2288 5286 8.846211 TCCTTTCTTCTTTGATCGTAAATTGTT 58.154 29.630 0.00 0.00 0.00 2.83
2289 5287 8.391075 TCCTTTCTTCTTTGATCGTAAATTGT 57.609 30.769 0.00 0.00 0.00 2.71
2290 5288 9.677567 TTTCCTTTCTTCTTTGATCGTAAATTG 57.322 29.630 0.00 0.00 0.00 2.32
2292 5290 9.899226 CTTTTCCTTTCTTCTTTGATCGTAAAT 57.101 29.630 0.00 0.00 0.00 1.40
2293 5291 8.899771 ACTTTTCCTTTCTTCTTTGATCGTAAA 58.100 29.630 0.00 0.00 0.00 2.01
2294 5292 8.446599 ACTTTTCCTTTCTTCTTTGATCGTAA 57.553 30.769 0.00 0.00 0.00 3.18
2295 5293 9.204570 CTACTTTTCCTTTCTTCTTTGATCGTA 57.795 33.333 0.00 0.00 0.00 3.43
2296 5294 6.944234 ACTTTTCCTTTCTTCTTTGATCGT 57.056 33.333 0.00 0.00 0.00 3.73
2297 5295 7.173390 ACCTACTTTTCCTTTCTTCTTTGATCG 59.827 37.037 0.00 0.00 0.00 3.69
2298 5296 8.397575 ACCTACTTTTCCTTTCTTCTTTGATC 57.602 34.615 0.00 0.00 0.00 2.92
2299 5297 8.768501 AACCTACTTTTCCTTTCTTCTTTGAT 57.231 30.769 0.00 0.00 0.00 2.57
2300 5298 7.012044 CGAACCTACTTTTCCTTTCTTCTTTGA 59.988 37.037 0.00 0.00 0.00 2.69
2301 5299 7.012044 TCGAACCTACTTTTCCTTTCTTCTTTG 59.988 37.037 0.00 0.00 0.00 2.77
2302 5300 7.052248 TCGAACCTACTTTTCCTTTCTTCTTT 58.948 34.615 0.00 0.00 0.00 2.52
2303 5301 6.589135 TCGAACCTACTTTTCCTTTCTTCTT 58.411 36.000 0.00 0.00 0.00 2.52
2304 5302 6.170846 TCGAACCTACTTTTCCTTTCTTCT 57.829 37.500 0.00 0.00 0.00 2.85
2305 5303 7.601508 TGTATCGAACCTACTTTTCCTTTCTTC 59.398 37.037 0.00 0.00 0.00 2.87
2306 5304 7.447594 TGTATCGAACCTACTTTTCCTTTCTT 58.552 34.615 0.00 0.00 0.00 2.52
2307 5305 7.001099 TGTATCGAACCTACTTTTCCTTTCT 57.999 36.000 0.00 0.00 0.00 2.52
2308 5306 7.148457 CCTTGTATCGAACCTACTTTTCCTTTC 60.148 40.741 0.00 0.00 0.00 2.62
2309 5307 6.653740 CCTTGTATCGAACCTACTTTTCCTTT 59.346 38.462 0.00 0.00 0.00 3.11
2310 5308 6.171213 CCTTGTATCGAACCTACTTTTCCTT 58.829 40.000 0.00 0.00 0.00 3.36
2311 5309 5.731591 CCTTGTATCGAACCTACTTTTCCT 58.268 41.667 0.00 0.00 0.00 3.36
2312 5310 4.331992 GCCTTGTATCGAACCTACTTTTCC 59.668 45.833 0.00 0.00 0.00 3.13
2313 5311 4.032558 CGCCTTGTATCGAACCTACTTTTC 59.967 45.833 0.00 0.00 0.00 2.29
2314 5312 3.930848 CGCCTTGTATCGAACCTACTTTT 59.069 43.478 0.00 0.00 0.00 2.27
2315 5313 3.518590 CGCCTTGTATCGAACCTACTTT 58.481 45.455 0.00 0.00 0.00 2.66
2316 5314 2.737679 GCGCCTTGTATCGAACCTACTT 60.738 50.000 0.00 0.00 0.00 2.24
2317 5315 1.202382 GCGCCTTGTATCGAACCTACT 60.202 52.381 0.00 0.00 0.00 2.57
2318 5316 1.206523 GCGCCTTGTATCGAACCTAC 58.793 55.000 0.00 0.00 0.00 3.18
2319 5317 0.818938 TGCGCCTTGTATCGAACCTA 59.181 50.000 4.18 0.00 0.00 3.08
2320 5318 0.036765 TTGCGCCTTGTATCGAACCT 60.037 50.000 4.18 0.00 0.00 3.50
2321 5319 0.800012 TTTGCGCCTTGTATCGAACC 59.200 50.000 4.18 0.00 0.00 3.62
2322 5320 1.202031 CCTTTGCGCCTTGTATCGAAC 60.202 52.381 4.18 0.00 0.00 3.95
2323 5321 1.083489 CCTTTGCGCCTTGTATCGAA 58.917 50.000 4.18 0.00 0.00 3.71
2324 5322 1.366111 GCCTTTGCGCCTTGTATCGA 61.366 55.000 4.18 0.00 0.00 3.59
2325 5323 1.062525 GCCTTTGCGCCTTGTATCG 59.937 57.895 4.18 0.00 0.00 2.92
2326 5324 1.433471 GGCCTTTGCGCCTTGTATC 59.567 57.895 4.18 0.00 46.10 2.24
2327 5325 3.603365 GGCCTTTGCGCCTTGTAT 58.397 55.556 4.18 0.00 46.10 2.29
2334 5332 0.304401 CTTGTTTTTGGCCTTTGCGC 59.696 50.000 3.32 0.00 38.85 6.09
2335 5333 0.936600 CCTTGTTTTTGGCCTTTGCG 59.063 50.000 3.32 0.00 38.85 4.85
2336 5334 1.134250 TCCCTTGTTTTTGGCCTTTGC 60.134 47.619 3.32 0.00 0.00 3.68
2337 5335 2.998316 TCCCTTGTTTTTGGCCTTTG 57.002 45.000 3.32 0.00 0.00 2.77
2338 5336 2.421388 GCTTCCCTTGTTTTTGGCCTTT 60.421 45.455 3.32 0.00 0.00 3.11
2339 5337 1.140852 GCTTCCCTTGTTTTTGGCCTT 59.859 47.619 3.32 0.00 0.00 4.35
2340 5338 0.758734 GCTTCCCTTGTTTTTGGCCT 59.241 50.000 3.32 0.00 0.00 5.19
2341 5339 0.599991 CGCTTCCCTTGTTTTTGGCC 60.600 55.000 0.00 0.00 0.00 5.36
2342 5340 0.599991 CCGCTTCCCTTGTTTTTGGC 60.600 55.000 0.00 0.00 0.00 4.52
2343 5341 0.599991 GCCGCTTCCCTTGTTTTTGG 60.600 55.000 0.00 0.00 0.00 3.28
2344 5342 0.939106 CGCCGCTTCCCTTGTTTTTG 60.939 55.000 0.00 0.00 0.00 2.44
2345 5343 1.362355 CGCCGCTTCCCTTGTTTTT 59.638 52.632 0.00 0.00 0.00 1.94
2346 5344 3.039134 CGCCGCTTCCCTTGTTTT 58.961 55.556 0.00 0.00 0.00 2.43
2347 5345 3.670377 GCGCCGCTTCCCTTGTTT 61.670 61.111 0.00 0.00 0.00 2.83
2348 5346 4.947147 TGCGCCGCTTCCCTTGTT 62.947 61.111 11.67 0.00 0.00 2.83
2349 5347 4.722700 ATGCGCCGCTTCCCTTGT 62.723 61.111 11.67 0.00 0.00 3.16
2350 5348 4.183686 CATGCGCCGCTTCCCTTG 62.184 66.667 11.67 0.00 0.00 3.61
2359 5357 4.781959 CCAAGTTGCCATGCGCCG 62.782 66.667 4.18 0.00 36.24 6.46
2360 5358 2.618312 GATCCAAGTTGCCATGCGCC 62.618 60.000 4.18 0.00 36.24 6.53
2361 5359 1.226773 GATCCAAGTTGCCATGCGC 60.227 57.895 0.00 0.00 38.31 6.09
2362 5360 0.379669 GAGATCCAAGTTGCCATGCG 59.620 55.000 0.00 0.00 0.00 4.73
2363 5361 0.743097 GGAGATCCAAGTTGCCATGC 59.257 55.000 0.00 0.00 35.64 4.06
2364 5362 2.133281 TGGAGATCCAAGTTGCCATG 57.867 50.000 0.00 0.00 44.35 3.66
2389 5387 1.008309 GATAGCCGGAGCGTGTCTC 60.008 63.158 5.05 0.00 46.67 3.36
2390 5388 1.448922 GAGATAGCCGGAGCGTGTCT 61.449 60.000 5.05 0.00 46.67 3.41
2391 5389 1.008309 GAGATAGCCGGAGCGTGTC 60.008 63.158 5.05 0.00 46.67 3.67
2392 5390 1.448922 GAGAGATAGCCGGAGCGTGT 61.449 60.000 5.05 0.00 46.67 4.49
2393 5391 1.284408 GAGAGATAGCCGGAGCGTG 59.716 63.158 5.05 0.00 46.67 5.34
2394 5392 1.899534 GGAGAGATAGCCGGAGCGT 60.900 63.158 5.05 0.00 46.67 5.07
2395 5393 1.175983 AAGGAGAGATAGCCGGAGCG 61.176 60.000 5.05 0.00 46.67 5.03
2396 5394 1.816224 CTAAGGAGAGATAGCCGGAGC 59.184 57.143 5.05 0.00 40.32 4.70
2397 5395 1.816224 GCTAAGGAGAGATAGCCGGAG 59.184 57.143 5.05 0.00 38.85 4.63
2398 5396 1.912417 GCTAAGGAGAGATAGCCGGA 58.088 55.000 5.05 0.00 38.85 5.14
2402 5400 2.029110 CAGCTGGCTAAGGAGAGATAGC 60.029 54.545 5.57 0.00 42.98 2.97
2403 5401 2.029110 GCAGCTGGCTAAGGAGAGATAG 60.029 54.545 17.12 0.00 40.25 2.08
2404 5402 1.967066 GCAGCTGGCTAAGGAGAGATA 59.033 52.381 17.12 0.00 40.25 1.98
2405 5403 0.758123 GCAGCTGGCTAAGGAGAGAT 59.242 55.000 17.12 0.00 40.25 2.75
2406 5404 0.615827 TGCAGCTGGCTAAGGAGAGA 60.616 55.000 17.12 0.00 45.15 3.10
2407 5405 1.903294 TGCAGCTGGCTAAGGAGAG 59.097 57.895 17.12 0.00 45.15 3.20
2408 5406 4.135293 TGCAGCTGGCTAAGGAGA 57.865 55.556 17.12 0.00 45.15 3.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.