Multiple sequence alignment - TraesCS7D01G270000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G270000 chr7D 100.000 3563 0 0 1 3563 255060271 255056709 0.000000e+00 6580.0
1 TraesCS7D01G270000 chr7D 92.308 221 16 1 3344 3563 95828902 95828682 2.670000e-81 313.0
2 TraesCS7D01G270000 chr7D 79.644 393 41 14 2708 3063 117208213 117208603 2.750000e-61 246.0
3 TraesCS7D01G270000 chr7D 90.419 167 14 2 2900 3064 257272728 257272562 5.990000e-53 219.0
4 TraesCS7D01G270000 chr7B 97.283 1951 49 1 758 2708 233027954 233026008 0.000000e+00 3306.0
5 TraesCS7D01G270000 chr7B 91.176 306 18 6 2 298 233029108 233028803 1.190000e-109 407.0
6 TraesCS7D01G270000 chr7B 84.099 283 21 6 3059 3341 233026011 233025753 5.900000e-63 252.0
7 TraesCS7D01G270000 chr7B 90.741 162 13 2 2900 3059 74736135 74735974 7.750000e-52 215.0
8 TraesCS7D01G270000 chr7B 79.503 161 19 10 602 751 70071563 70071406 6.290000e-18 102.0
9 TraesCS7D01G270000 chr7B 78.710 155 23 7 602 750 588059953 588059803 1.050000e-15 95.3
10 TraesCS7D01G270000 chr7A 97.010 1940 42 7 753 2677 274663176 274661238 0.000000e+00 3247.0
11 TraesCS7D01G270000 chr7A 90.302 629 23 15 2 605 274663780 274663165 0.000000e+00 789.0
12 TraesCS7D01G270000 chr7A 93.750 160 6 3 3182 3341 274660974 274660819 1.650000e-58 237.0
13 TraesCS7D01G270000 chr7A 92.632 95 6 1 3059 3153 274661220 274661127 6.200000e-28 135.0
14 TraesCS7D01G270000 chr7A 87.879 99 11 1 2707 2804 299560034 299560132 8.080000e-22 115.0
15 TraesCS7D01G270000 chr5D 81.053 1367 245 11 1109 2471 412076936 412078292 0.000000e+00 1077.0
16 TraesCS7D01G270000 chr5D 93.617 47 3 0 602 648 132465930 132465976 1.770000e-08 71.3
17 TraesCS7D01G270000 chr5A 80.994 1368 244 12 1109 2471 523815637 523816993 0.000000e+00 1072.0
18 TraesCS7D01G270000 chr5A 93.182 220 14 1 3344 3563 1305455 1305237 4.440000e-84 322.0
19 TraesCS7D01G270000 chr5A 79.404 403 25 23 2708 3063 306895343 306894952 7.690000e-57 231.0
20 TraesCS7D01G270000 chr5B 80.643 1369 247 15 1109 2471 495019849 495021205 0.000000e+00 1044.0
21 TraesCS7D01G270000 chr5B 94.009 217 12 1 3347 3562 273281975 273282191 9.540000e-86 327.0
22 TraesCS7D01G270000 chr3D 95.067 223 11 0 3341 3563 604567317 604567539 5.660000e-93 351.0
23 TraesCS7D01G270000 chr3D 84.211 380 22 16 2707 3063 25977002 25977366 5.700000e-88 335.0
24 TraesCS7D01G270000 chr3D 93.182 220 15 0 3344 3563 23968509 23968290 1.230000e-84 324.0
25 TraesCS7D01G270000 chr3D 93.182 220 14 1 3345 3563 75614561 75614780 4.440000e-84 322.0
26 TraesCS7D01G270000 chr3D 84.103 195 10 8 2707 2880 213131332 213131526 6.120000e-38 169.0
27 TraesCS7D01G270000 chr1D 92.444 225 16 1 3340 3563 409016920 409017144 1.600000e-83 320.0
28 TraesCS7D01G270000 chr1D 75.610 369 47 30 104 462 241241583 241241918 3.710000e-30 143.0
29 TraesCS7D01G270000 chr1D 81.250 160 19 9 602 751 471758415 471758257 6.250000e-23 119.0
30 TraesCS7D01G270000 chr1D 80.000 160 21 8 602 751 23371885 23372043 1.350000e-19 108.0
31 TraesCS7D01G270000 chr1D 79.365 126 21 5 628 752 3326950 3326829 2.280000e-12 84.2
32 TraesCS7D01G270000 chr4D 92.694 219 15 1 3346 3563 85826665 85826883 7.430000e-82 315.0
33 TraesCS7D01G270000 chr4D 92.273 220 17 0 3344 3563 54805097 54804878 2.670000e-81 313.0
34 TraesCS7D01G270000 chr4D 82.990 194 12 7 2708 2880 426842985 426843178 4.760000e-34 156.0
35 TraesCS7D01G270000 chr2D 80.402 398 32 17 2708 3059 600330395 600329998 9.810000e-66 261.0
36 TraesCS7D01G270000 chr2D 91.875 160 11 2 2905 3062 420572232 420572391 4.630000e-54 222.0
37 TraesCS7D01G270000 chr2D 90.361 166 13 3 2900 3063 379969034 379969198 7.750000e-52 215.0
38 TraesCS7D01G270000 chr2D 84.615 195 9 8 2707 2880 40642141 40641947 1.310000e-39 174.0
39 TraesCS7D01G270000 chr2D 83.590 195 10 9 2708 2880 379968796 379968990 2.850000e-36 163.0
40 TraesCS7D01G270000 chr2D 79.641 167 22 9 602 757 520742126 520741961 3.760000e-20 110.0
41 TraesCS7D01G270000 chr2D 79.755 163 22 8 602 754 630131565 630131404 1.350000e-19 108.0
42 TraesCS7D01G270000 chr2D 89.831 59 4 2 602 658 24358777 24358719 1.370000e-09 75.0
43 TraesCS7D01G270000 chr3A 90.741 162 13 2 2900 3059 744568218 744568379 7.750000e-52 215.0
44 TraesCS7D01G270000 chr2B 84.184 196 10 7 2705 2879 405533757 405533562 1.700000e-38 171.0
45 TraesCS7D01G270000 chr2B 83.249 197 10 9 2706 2880 43853943 43854138 3.680000e-35 159.0
46 TraesCS7D01G270000 chr2B 79.290 169 21 11 602 760 446108719 446108883 4.860000e-19 106.0
47 TraesCS7D01G270000 chr6B 84.103 195 9 9 2707 2880 651948076 651948269 6.120000e-38 169.0
48 TraesCS7D01G270000 chr6B 72.628 548 125 21 1850 2386 484100174 484099641 1.320000e-34 158.0
49 TraesCS7D01G270000 chr6B 79.592 147 26 4 1190 1334 484100810 484100666 6.290000e-18 102.0
50 TraesCS7D01G270000 chr1B 82.653 196 13 7 2705 2879 132469310 132469505 1.710000e-33 154.0
51 TraesCS7D01G270000 chr6A 76.733 202 47 0 1133 1334 476000208 476000409 2.910000e-21 113.0
52 TraesCS7D01G270000 chr6D 75.980 204 45 4 1133 1334 336366538 336366739 6.290000e-18 102.0
53 TraesCS7D01G270000 chr4B 77.778 162 25 9 602 754 621676701 621676542 4.900000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G270000 chr7D 255056709 255060271 3562 True 6580.000000 6580 100.000000 1 3563 1 chr7D.!!$R2 3562
1 TraesCS7D01G270000 chr7B 233025753 233029108 3355 True 1321.666667 3306 90.852667 2 3341 3 chr7B.!!$R4 3339
2 TraesCS7D01G270000 chr7A 274660819 274663780 2961 True 1102.000000 3247 93.423500 2 3341 4 chr7A.!!$R1 3339
3 TraesCS7D01G270000 chr5D 412076936 412078292 1356 False 1077.000000 1077 81.053000 1109 2471 1 chr5D.!!$F2 1362
4 TraesCS7D01G270000 chr5A 523815637 523816993 1356 False 1072.000000 1072 80.994000 1109 2471 1 chr5A.!!$F1 1362
5 TraesCS7D01G270000 chr5B 495019849 495021205 1356 False 1044.000000 1044 80.643000 1109 2471 1 chr5B.!!$F2 1362

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
481 1141 0.107456 CCCTGGTCATGATTCTCGGG 59.893 60.0 0.0 4.12 0.0 5.14 F
590 1250 0.321653 GCAAACCTCGATGACCCACT 60.322 55.0 0.0 0.00 0.0 4.00 F
1503 2169 0.683412 TCATATGCTCGCTGCCAGAT 59.317 50.0 0.0 0.00 42.0 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1503 2169 1.251527 GGAAGGACTGCACGAGGAGA 61.252 60.000 8.59 0.0 36.58 3.71 R
2277 2943 1.407437 CCATAGAAGGCTGAGGCGTTT 60.407 52.381 0.00 0.0 44.97 3.60 R
2707 3381 0.105709 CCTGGAAACAAACACCCCCT 60.106 55.000 0.00 0.0 42.06 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
158 160 7.939039 CCTAAAACAATATCAGAGATGCCCTAA 59.061 37.037 0.00 0.00 0.00 2.69
216 226 8.581457 TCCTCCATATATTAATTCATAGGGGG 57.419 38.462 8.40 5.75 31.09 5.40
422 1073 1.686115 GGATGGACAATGACCCCAAGG 60.686 57.143 0.00 0.00 40.04 3.61
466 1117 2.159099 TGCTACGATAGAAACAGCCCTG 60.159 50.000 0.00 0.00 41.38 4.45
471 1131 2.158900 CGATAGAAACAGCCCTGGTCAT 60.159 50.000 0.00 0.00 39.76 3.06
480 1140 0.533755 GCCCTGGTCATGATTCTCGG 60.534 60.000 0.00 0.00 0.00 4.63
481 1141 0.107456 CCCTGGTCATGATTCTCGGG 59.893 60.000 0.00 4.12 0.00 5.14
530 1190 3.629142 ACCATTCGACCCCTAAAGAAG 57.371 47.619 0.00 0.00 0.00 2.85
546 1206 1.064389 AGAAGCAAGCATTACCCCTCC 60.064 52.381 0.00 0.00 0.00 4.30
590 1250 0.321653 GCAAACCTCGATGACCCACT 60.322 55.000 0.00 0.00 0.00 4.00
607 1267 6.195600 ACCCACTGGTTAATAAAACTCAGA 57.804 37.500 11.02 0.00 44.75 3.27
608 1268 6.002082 ACCCACTGGTTAATAAAACTCAGAC 58.998 40.000 11.02 0.00 44.75 3.51
609 1269 6.183361 ACCCACTGGTTAATAAAACTCAGACT 60.183 38.462 11.02 0.00 44.75 3.24
610 1270 6.715264 CCCACTGGTTAATAAAACTCAGACTT 59.285 38.462 11.02 0.00 0.00 3.01
611 1271 7.881232 CCCACTGGTTAATAAAACTCAGACTTA 59.119 37.037 11.02 0.00 0.00 2.24
612 1272 9.280174 CCACTGGTTAATAAAACTCAGACTTAA 57.720 33.333 11.02 0.00 0.00 1.85
614 1274 8.985805 ACTGGTTAATAAAACTCAGACTTAACG 58.014 33.333 11.02 0.00 32.52 3.18
615 1275 9.199982 CTGGTTAATAAAACTCAGACTTAACGA 57.800 33.333 0.00 0.00 32.52 3.85
616 1276 9.545105 TGGTTAATAAAACTCAGACTTAACGAA 57.455 29.630 0.00 0.00 32.52 3.85
630 1290 6.771188 ACTTAACGAAGTCTCAATCAAGTG 57.229 37.500 0.00 0.00 45.00 3.16
631 1291 6.513180 ACTTAACGAAGTCTCAATCAAGTGA 58.487 36.000 0.00 0.00 45.00 3.41
632 1292 7.155328 ACTTAACGAAGTCTCAATCAAGTGAT 58.845 34.615 0.00 0.00 45.00 3.06
633 1293 8.304596 ACTTAACGAAGTCTCAATCAAGTGATA 58.695 33.333 0.00 0.00 45.00 2.15
634 1294 9.307121 CTTAACGAAGTCTCAATCAAGTGATAT 57.693 33.333 0.00 0.00 45.00 1.63
637 1297 9.823647 AACGAAGTCTCAATCAAGTGATATAAT 57.176 29.630 0.00 0.00 45.00 1.28
686 1346 8.674263 TTTTTGCACAAATCTCCATGTAAAAT 57.326 26.923 0.00 0.00 36.80 1.82
687 1347 7.887996 TTTGCACAAATCTCCATGTAAAATC 57.112 32.000 0.00 0.00 0.00 2.17
688 1348 6.587206 TGCACAAATCTCCATGTAAAATCA 57.413 33.333 0.00 0.00 0.00 2.57
689 1349 6.990798 TGCACAAATCTCCATGTAAAATCAA 58.009 32.000 0.00 0.00 0.00 2.57
690 1350 7.440198 TGCACAAATCTCCATGTAAAATCAAA 58.560 30.769 0.00 0.00 0.00 2.69
691 1351 7.930325 TGCACAAATCTCCATGTAAAATCAAAA 59.070 29.630 0.00 0.00 0.00 2.44
692 1352 8.772705 GCACAAATCTCCATGTAAAATCAAAAA 58.227 29.630 0.00 0.00 0.00 1.94
715 1375 9.799106 AAAAAGGGATATTATCGATCAAGACAT 57.201 29.630 0.00 0.00 0.00 3.06
718 1378 9.877178 AAGGGATATTATCGATCAAGACATAAC 57.123 33.333 0.00 0.00 0.00 1.89
719 1379 8.191446 AGGGATATTATCGATCAAGACATAACG 58.809 37.037 0.00 0.00 0.00 3.18
720 1380 8.188799 GGGATATTATCGATCAAGACATAACGA 58.811 37.037 0.00 0.00 0.00 3.85
721 1381 9.569167 GGATATTATCGATCAAGACATAACGAA 57.431 33.333 0.00 0.00 33.77 3.85
724 1384 7.909777 TTATCGATCAAGACATAACGAAGTC 57.090 36.000 0.00 0.00 45.00 3.01
725 1385 5.562506 TCGATCAAGACATAACGAAGTCT 57.437 39.130 0.00 0.00 45.00 3.24
726 1386 6.673154 TCGATCAAGACATAACGAAGTCTA 57.327 37.500 0.00 0.00 45.00 2.59
727 1387 7.080353 TCGATCAAGACATAACGAAGTCTAA 57.920 36.000 0.00 0.00 45.00 2.10
728 1388 7.187480 TCGATCAAGACATAACGAAGTCTAAG 58.813 38.462 0.00 0.00 45.00 2.18
729 1389 6.967767 CGATCAAGACATAACGAAGTCTAAGT 59.032 38.462 0.00 0.00 45.00 2.24
730 1390 7.164498 CGATCAAGACATAACGAAGTCTAAGTC 59.836 40.741 0.00 0.00 45.00 3.01
731 1391 6.312487 TCAAGACATAACGAAGTCTAAGTCG 58.688 40.000 0.00 0.00 45.00 4.18
732 1392 6.148315 TCAAGACATAACGAAGTCTAAGTCGA 59.852 38.462 0.00 0.00 45.00 4.20
733 1393 5.867166 AGACATAACGAAGTCTAAGTCGAC 58.133 41.667 7.70 7.70 45.00 4.20
734 1394 5.642919 AGACATAACGAAGTCTAAGTCGACT 59.357 40.000 13.58 13.58 45.00 4.18
735 1395 5.629097 ACATAACGAAGTCTAAGTCGACTG 58.371 41.667 20.85 7.79 45.00 3.51
736 1396 5.410746 ACATAACGAAGTCTAAGTCGACTGA 59.589 40.000 20.85 11.31 45.00 3.41
737 1397 4.407496 AACGAAGTCTAAGTCGACTGAG 57.593 45.455 22.32 22.32 45.00 3.35
738 1398 3.661944 ACGAAGTCTAAGTCGACTGAGA 58.338 45.455 26.12 26.12 43.14 3.27
776 1436 8.594881 ATTAATAAAGTCGATGGCTAAGTCTG 57.405 34.615 0.00 0.00 0.00 3.51
778 1438 1.115467 AGTCGATGGCTAAGTCTGGG 58.885 55.000 0.00 0.00 0.00 4.45
781 1441 0.824109 CGATGGCTAAGTCTGGGTCA 59.176 55.000 0.00 0.00 0.00 4.02
787 1447 3.266772 TGGCTAAGTCTGGGTCAATTGAT 59.733 43.478 12.12 0.00 0.00 2.57
798 1458 8.416329 GTCTGGGTCAATTGATATTTAGCAAAT 58.584 33.333 12.12 0.00 35.04 2.32
908 1568 1.035139 CCAAAGCCACCATGGATAGC 58.965 55.000 21.47 17.39 40.96 2.97
1488 2154 3.372060 CGCTGCTTACGACTTCATCATA 58.628 45.455 0.00 0.00 0.00 2.15
1503 2169 0.683412 TCATATGCTCGCTGCCAGAT 59.317 50.000 0.00 0.00 42.00 2.90
1779 2445 3.319755 CAAAGATGGTGCATGTTTGTCC 58.680 45.455 0.00 0.00 44.55 4.02
2651 3325 5.341872 TGTCCATTGGCATTTTTAGGATG 57.658 39.130 0.00 0.00 0.00 3.51
2704 3378 1.373570 CCTCGTTGAATTGAGGGAGC 58.626 55.000 8.16 0.00 46.55 4.70
2705 3379 1.339055 CCTCGTTGAATTGAGGGAGCA 60.339 52.381 8.16 0.00 46.55 4.26
2706 3380 2.636830 CTCGTTGAATTGAGGGAGCAT 58.363 47.619 0.00 0.00 0.00 3.79
2707 3381 3.432186 CCTCGTTGAATTGAGGGAGCATA 60.432 47.826 8.16 0.00 46.55 3.14
2708 3382 3.797039 TCGTTGAATTGAGGGAGCATAG 58.203 45.455 0.00 0.00 0.00 2.23
2709 3383 2.874701 CGTTGAATTGAGGGAGCATAGG 59.125 50.000 0.00 0.00 0.00 2.57
2710 3384 3.217626 GTTGAATTGAGGGAGCATAGGG 58.782 50.000 0.00 0.00 0.00 3.53
2711 3385 1.776667 TGAATTGAGGGAGCATAGGGG 59.223 52.381 0.00 0.00 0.00 4.79
2712 3386 1.074566 GAATTGAGGGAGCATAGGGGG 59.925 57.143 0.00 0.00 0.00 5.40
2713 3387 0.028642 ATTGAGGGAGCATAGGGGGT 60.029 55.000 0.00 0.00 0.00 4.95
2714 3388 0.988145 TTGAGGGAGCATAGGGGGTG 60.988 60.000 0.00 0.00 0.00 4.61
2715 3389 1.384643 GAGGGAGCATAGGGGGTGT 60.385 63.158 0.00 0.00 0.00 4.16
2716 3390 0.988678 GAGGGAGCATAGGGGGTGTT 60.989 60.000 0.00 0.00 0.00 3.32
2717 3391 0.552615 AGGGAGCATAGGGGGTGTTT 60.553 55.000 0.00 0.00 0.00 2.83
2718 3392 0.395724 GGGAGCATAGGGGGTGTTTG 60.396 60.000 0.00 0.00 0.00 2.93
2719 3393 0.331616 GGAGCATAGGGGGTGTTTGT 59.668 55.000 0.00 0.00 0.00 2.83
2720 3394 1.272480 GGAGCATAGGGGGTGTTTGTT 60.272 52.381 0.00 0.00 0.00 2.83
2721 3395 2.525368 GAGCATAGGGGGTGTTTGTTT 58.475 47.619 0.00 0.00 0.00 2.83
2722 3396 2.492088 GAGCATAGGGGGTGTTTGTTTC 59.508 50.000 0.00 0.00 0.00 2.78
2723 3397 1.548719 GCATAGGGGGTGTTTGTTTCC 59.451 52.381 0.00 0.00 0.00 3.13
2724 3398 2.883026 CATAGGGGGTGTTTGTTTCCA 58.117 47.619 0.00 0.00 0.00 3.53
2725 3399 2.668144 TAGGGGGTGTTTGTTTCCAG 57.332 50.000 0.00 0.00 0.00 3.86
2726 3400 0.105709 AGGGGGTGTTTGTTTCCAGG 60.106 55.000 0.00 0.00 0.00 4.45
2727 3401 0.105913 GGGGGTGTTTGTTTCCAGGA 60.106 55.000 0.00 0.00 0.00 3.86
2728 3402 1.037493 GGGGTGTTTGTTTCCAGGAC 58.963 55.000 0.00 0.00 0.00 3.85
2729 3403 1.411074 GGGGTGTTTGTTTCCAGGACT 60.411 52.381 0.00 0.00 0.00 3.85
2730 3404 2.384828 GGGTGTTTGTTTCCAGGACTT 58.615 47.619 0.00 0.00 0.00 3.01
2731 3405 2.764010 GGGTGTTTGTTTCCAGGACTTT 59.236 45.455 0.00 0.00 0.00 2.66
2732 3406 3.196901 GGGTGTTTGTTTCCAGGACTTTT 59.803 43.478 0.00 0.00 0.00 2.27
2733 3407 4.323180 GGGTGTTTGTTTCCAGGACTTTTT 60.323 41.667 0.00 0.00 0.00 1.94
2734 3408 4.629634 GGTGTTTGTTTCCAGGACTTTTTG 59.370 41.667 0.00 0.00 0.00 2.44
2735 3409 4.629634 GTGTTTGTTTCCAGGACTTTTTGG 59.370 41.667 0.00 0.00 35.74 3.28
2736 3410 4.284746 TGTTTGTTTCCAGGACTTTTTGGT 59.715 37.500 0.00 0.00 35.89 3.67
2737 3411 4.464069 TTGTTTCCAGGACTTTTTGGTG 57.536 40.909 0.00 0.00 35.89 4.17
2738 3412 3.436243 TGTTTCCAGGACTTTTTGGTGT 58.564 40.909 0.00 0.00 35.89 4.16
2739 3413 4.601084 TGTTTCCAGGACTTTTTGGTGTA 58.399 39.130 0.00 0.00 35.89 2.90
2740 3414 4.642885 TGTTTCCAGGACTTTTTGGTGTAG 59.357 41.667 0.00 0.00 35.89 2.74
2741 3415 3.502123 TCCAGGACTTTTTGGTGTAGG 57.498 47.619 0.00 0.00 35.89 3.18
2742 3416 3.050089 TCCAGGACTTTTTGGTGTAGGA 58.950 45.455 0.00 0.00 35.89 2.94
2743 3417 3.460340 TCCAGGACTTTTTGGTGTAGGAA 59.540 43.478 0.00 0.00 35.89 3.36
2744 3418 3.568430 CCAGGACTTTTTGGTGTAGGAAC 59.432 47.826 0.00 0.00 0.00 3.62
2745 3419 4.461198 CAGGACTTTTTGGTGTAGGAACT 58.539 43.478 0.00 0.00 46.37 3.01
2746 3420 5.455612 CCAGGACTTTTTGGTGTAGGAACTA 60.456 44.000 0.00 0.00 41.75 2.24
2747 3421 6.059484 CAGGACTTTTTGGTGTAGGAACTAA 58.941 40.000 0.00 0.00 45.48 2.24
2748 3422 6.544564 CAGGACTTTTTGGTGTAGGAACTAAA 59.455 38.462 0.00 0.00 45.48 1.85
2749 3423 7.067737 CAGGACTTTTTGGTGTAGGAACTAAAA 59.932 37.037 0.00 0.00 45.48 1.52
2750 3424 7.616542 AGGACTTTTTGGTGTAGGAACTAAAAA 59.383 33.333 9.84 9.84 45.48 1.94
2775 3449 6.608539 AGTCCCTCCTAGAGACTTTTTAAC 57.391 41.667 0.00 0.00 37.60 2.01
2776 3450 6.082707 AGTCCCTCCTAGAGACTTTTTAACA 58.917 40.000 0.00 0.00 37.60 2.41
2777 3451 6.557633 AGTCCCTCCTAGAGACTTTTTAACAA 59.442 38.462 0.00 0.00 37.60 2.83
2778 3452 7.072076 AGTCCCTCCTAGAGACTTTTTAACAAA 59.928 37.037 0.00 0.00 37.60 2.83
2779 3453 7.172875 GTCCCTCCTAGAGACTTTTTAACAAAC 59.827 40.741 0.00 0.00 0.00 2.93
2780 3454 6.996282 CCCTCCTAGAGACTTTTTAACAAACA 59.004 38.462 0.00 0.00 0.00 2.83
2781 3455 7.173390 CCCTCCTAGAGACTTTTTAACAAACAG 59.827 40.741 0.00 0.00 0.00 3.16
2782 3456 7.173390 CCTCCTAGAGACTTTTTAACAAACAGG 59.827 40.741 0.00 0.00 0.00 4.00
2783 3457 7.798071 TCCTAGAGACTTTTTAACAAACAGGA 58.202 34.615 0.00 0.00 0.00 3.86
2784 3458 7.931948 TCCTAGAGACTTTTTAACAAACAGGAG 59.068 37.037 0.00 0.00 0.00 3.69
2785 3459 6.944234 AGAGACTTTTTAACAAACAGGAGG 57.056 37.500 0.00 0.00 0.00 4.30
2786 3460 6.424032 AGAGACTTTTTAACAAACAGGAGGT 58.576 36.000 0.00 0.00 0.00 3.85
2787 3461 6.890268 AGAGACTTTTTAACAAACAGGAGGTT 59.110 34.615 0.00 0.00 42.98 3.50
2788 3462 6.863275 AGACTTTTTAACAAACAGGAGGTTG 58.137 36.000 0.00 0.00 40.35 3.77
2789 3463 6.436218 AGACTTTTTAACAAACAGGAGGTTGT 59.564 34.615 0.00 0.00 40.35 3.32
2790 3464 6.999950 ACTTTTTAACAAACAGGAGGTTGTT 58.000 32.000 14.98 14.98 42.82 2.83
2792 3466 7.934665 ACTTTTTAACAAACAGGAGGTTGTTTT 59.065 29.630 15.70 0.00 46.18 2.43
2793 3467 8.678593 TTTTTAACAAACAGGAGGTTGTTTTT 57.321 26.923 15.70 6.47 46.18 1.94
2816 3490 9.862149 TTTTTGGGACTAAATAAAGAAGACTCT 57.138 29.630 0.00 0.00 0.00 3.24
2817 3491 9.503399 TTTTGGGACTAAATAAAGAAGACTCTC 57.497 33.333 0.00 0.00 0.00 3.20
2818 3492 7.792364 TGGGACTAAATAAAGAAGACTCTCA 57.208 36.000 0.00 0.00 0.00 3.27
2819 3493 8.202461 TGGGACTAAATAAAGAAGACTCTCAA 57.798 34.615 0.00 0.00 0.00 3.02
2820 3494 8.314751 TGGGACTAAATAAAGAAGACTCTCAAG 58.685 37.037 0.00 0.00 0.00 3.02
2821 3495 7.766738 GGGACTAAATAAAGAAGACTCTCAAGG 59.233 40.741 0.00 0.00 0.00 3.61
2822 3496 8.532819 GGACTAAATAAAGAAGACTCTCAAGGA 58.467 37.037 0.00 0.00 0.00 3.36
2828 3502 9.487442 AATAAAGAAGACTCTCAAGGATAGTCT 57.513 33.333 8.07 8.07 44.29 3.24
2853 3527 5.826601 TTTTGCACCTTTTGGGATTTTTC 57.173 34.783 0.00 0.00 46.08 2.29
2854 3528 3.483808 TGCACCTTTTGGGATTTTTCC 57.516 42.857 0.00 0.00 46.08 3.13
2855 3529 2.774234 TGCACCTTTTGGGATTTTTCCA 59.226 40.909 0.00 0.00 46.08 3.53
2856 3530 3.200825 TGCACCTTTTGGGATTTTTCCAA 59.799 39.130 0.00 0.00 46.08 3.53
2857 3531 3.563808 GCACCTTTTGGGATTTTTCCAAC 59.436 43.478 0.00 0.00 43.20 3.77
2858 3532 4.775236 CACCTTTTGGGATTTTTCCAACA 58.225 39.130 0.00 0.00 43.20 3.33
2859 3533 5.189180 CACCTTTTGGGATTTTTCCAACAA 58.811 37.500 0.00 0.00 43.20 2.83
2860 3534 5.827267 CACCTTTTGGGATTTTTCCAACAAT 59.173 36.000 0.00 0.00 43.20 2.71
2861 3535 5.827267 ACCTTTTGGGATTTTTCCAACAATG 59.173 36.000 0.00 0.00 43.20 2.82
2862 3536 5.278414 CCTTTTGGGATTTTTCCAACAATGC 60.278 40.000 0.00 0.00 43.20 3.56
2863 3537 3.415457 TGGGATTTTTCCAACAATGCC 57.585 42.857 2.60 2.60 40.42 4.40
2864 3538 2.039613 TGGGATTTTTCCAACAATGCCC 59.960 45.455 6.34 0.00 39.53 5.36
2865 3539 2.617788 GGGATTTTTCCAACAATGCCCC 60.618 50.000 0.00 0.00 35.40 5.80
2866 3540 2.305635 GGATTTTTCCAACAATGCCCCT 59.694 45.455 0.00 0.00 0.00 4.79
2867 3541 3.599343 GATTTTTCCAACAATGCCCCTC 58.401 45.455 0.00 0.00 0.00 4.30
2868 3542 1.347062 TTTTCCAACAATGCCCCTCC 58.653 50.000 0.00 0.00 0.00 4.30
2869 3543 0.544120 TTTCCAACAATGCCCCTCCC 60.544 55.000 0.00 0.00 0.00 4.30
2870 3544 1.442886 TTCCAACAATGCCCCTCCCT 61.443 55.000 0.00 0.00 0.00 4.20
2871 3545 1.683365 CCAACAATGCCCCTCCCTG 60.683 63.158 0.00 0.00 0.00 4.45
2872 3546 2.037847 AACAATGCCCCTCCCTGC 59.962 61.111 0.00 0.00 0.00 4.85
2873 3547 2.855770 AACAATGCCCCTCCCTGCA 61.856 57.895 0.00 0.00 42.52 4.41
2874 3548 2.757099 CAATGCCCCTCCCTGCAC 60.757 66.667 0.00 0.00 40.88 4.57
2875 3549 4.066139 AATGCCCCTCCCTGCACC 62.066 66.667 0.00 0.00 40.88 5.01
2879 3553 3.350163 CCCCTCCCTGCACCCATT 61.350 66.667 0.00 0.00 0.00 3.16
2880 3554 2.006415 CCCCTCCCTGCACCCATTA 61.006 63.158 0.00 0.00 0.00 1.90
2881 3555 1.580066 CCCCTCCCTGCACCCATTAA 61.580 60.000 0.00 0.00 0.00 1.40
2882 3556 0.557729 CCCTCCCTGCACCCATTAAT 59.442 55.000 0.00 0.00 0.00 1.40
2883 3557 1.780309 CCCTCCCTGCACCCATTAATA 59.220 52.381 0.00 0.00 0.00 0.98
2884 3558 2.176798 CCCTCCCTGCACCCATTAATAA 59.823 50.000 0.00 0.00 0.00 1.40
2885 3559 3.222603 CCTCCCTGCACCCATTAATAAC 58.777 50.000 0.00 0.00 0.00 1.89
2886 3560 3.222603 CTCCCTGCACCCATTAATAACC 58.777 50.000 0.00 0.00 0.00 2.85
2887 3561 2.856231 TCCCTGCACCCATTAATAACCT 59.144 45.455 0.00 0.00 0.00 3.50
2888 3562 3.270960 TCCCTGCACCCATTAATAACCTT 59.729 43.478 0.00 0.00 0.00 3.50
2889 3563 4.030216 CCCTGCACCCATTAATAACCTTT 58.970 43.478 0.00 0.00 0.00 3.11
2890 3564 4.141959 CCCTGCACCCATTAATAACCTTTG 60.142 45.833 0.00 0.00 0.00 2.77
2891 3565 4.141959 CCTGCACCCATTAATAACCTTTGG 60.142 45.833 0.00 0.00 0.00 3.28
2911 3585 2.854736 GGGGGACTACTAGGGTAACA 57.145 55.000 0.00 0.00 39.74 2.41
2912 3586 3.341318 GGGGGACTACTAGGGTAACAT 57.659 52.381 0.00 0.00 39.74 2.71
2913 3587 2.970640 GGGGGACTACTAGGGTAACATG 59.029 54.545 0.00 0.00 39.74 3.21
2914 3588 2.970640 GGGGACTACTAGGGTAACATGG 59.029 54.545 0.00 0.00 39.74 3.66
2915 3589 3.631865 GGGGACTACTAGGGTAACATGGT 60.632 52.174 0.00 0.00 46.58 3.55
2916 3590 3.640498 GGGACTACTAGGGTAACATGGTC 59.360 52.174 0.00 0.00 37.64 4.02
2917 3591 4.544683 GGACTACTAGGGTAACATGGTCT 58.455 47.826 0.00 0.00 37.64 3.85
2918 3592 4.961099 GGACTACTAGGGTAACATGGTCTT 59.039 45.833 0.00 0.00 37.64 3.01
2919 3593 5.424573 GGACTACTAGGGTAACATGGTCTTT 59.575 44.000 0.00 0.00 37.64 2.52
2920 3594 6.070366 GGACTACTAGGGTAACATGGTCTTTT 60.070 42.308 0.00 0.00 37.64 2.27
2921 3595 7.124750 GGACTACTAGGGTAACATGGTCTTTTA 59.875 40.741 0.00 0.00 37.64 1.52
2922 3596 7.845037 ACTACTAGGGTAACATGGTCTTTTAC 58.155 38.462 0.00 0.00 37.64 2.01
2923 3597 6.691255 ACTAGGGTAACATGGTCTTTTACA 57.309 37.500 0.00 0.00 37.64 2.41
2924 3598 7.266905 ACTAGGGTAACATGGTCTTTTACAT 57.733 36.000 0.00 0.00 37.64 2.29
2925 3599 7.110155 ACTAGGGTAACATGGTCTTTTACATG 58.890 38.462 0.00 0.00 37.64 3.21
2947 3621 9.408648 ACATGTCATTTAATAACCTTTAGGGAG 57.591 33.333 0.00 0.00 40.27 4.30
2948 3622 8.850156 CATGTCATTTAATAACCTTTAGGGAGG 58.150 37.037 0.10 0.00 42.75 4.30
2949 3623 7.351166 TGTCATTTAATAACCTTTAGGGAGGG 58.649 38.462 0.10 0.00 41.31 4.30
2950 3624 7.184936 TGTCATTTAATAACCTTTAGGGAGGGA 59.815 37.037 0.10 0.00 41.31 4.20
2951 3625 7.501559 GTCATTTAATAACCTTTAGGGAGGGAC 59.498 40.741 0.10 0.00 41.31 4.46
2952 3626 7.407918 TCATTTAATAACCTTTAGGGAGGGACT 59.592 37.037 0.10 0.00 41.31 3.85
2953 3627 8.720537 CATTTAATAACCTTTAGGGAGGGACTA 58.279 37.037 0.10 0.00 41.31 2.59
2954 3628 7.926020 TTAATAACCTTTAGGGAGGGACTAG 57.074 40.000 0.10 0.00 41.31 2.57
2955 3629 3.868476 AACCTTTAGGGAGGGACTAGT 57.132 47.619 0.00 0.00 41.31 2.57
2956 3630 3.117552 ACCTTTAGGGAGGGACTAGTG 57.882 52.381 0.00 0.00 41.31 2.74
2957 3631 2.658489 ACCTTTAGGGAGGGACTAGTGA 59.342 50.000 0.00 0.00 41.31 3.41
2958 3632 3.032459 CCTTTAGGGAGGGACTAGTGAC 58.968 54.545 0.00 0.00 41.55 3.67
2959 3633 3.309994 CCTTTAGGGAGGGACTAGTGACT 60.310 52.174 0.00 0.00 41.55 3.41
2960 3634 4.354662 CTTTAGGGAGGGACTAGTGACTT 58.645 47.826 0.00 0.00 41.55 3.01
2961 3635 4.415224 TTAGGGAGGGACTAGTGACTTT 57.585 45.455 0.00 0.00 41.55 2.66
2962 3636 3.277416 AGGGAGGGACTAGTGACTTTT 57.723 47.619 0.00 0.00 41.55 2.27
2963 3637 3.599348 AGGGAGGGACTAGTGACTTTTT 58.401 45.455 0.00 0.00 41.55 1.94
2964 3638 4.759953 AGGGAGGGACTAGTGACTTTTTA 58.240 43.478 0.00 0.00 41.55 1.52
2965 3639 5.160386 AGGGAGGGACTAGTGACTTTTTAA 58.840 41.667 0.00 0.00 41.55 1.52
2966 3640 5.791141 AGGGAGGGACTAGTGACTTTTTAAT 59.209 40.000 0.00 0.00 41.55 1.40
2967 3641 6.070136 AGGGAGGGACTAGTGACTTTTTAATC 60.070 42.308 0.00 0.00 41.55 1.75
2968 3642 6.114089 GGAGGGACTAGTGACTTTTTAATCC 58.886 44.000 0.00 0.00 41.55 3.01
2969 3643 6.063496 AGGGACTAGTGACTTTTTAATCCC 57.937 41.667 0.00 0.00 43.14 3.85
2970 3644 6.063496 GGGACTAGTGACTTTTTAATCCCT 57.937 41.667 0.00 0.00 40.21 4.20
2971 3645 5.880887 GGGACTAGTGACTTTTTAATCCCTG 59.119 44.000 0.00 0.00 40.21 4.45
2972 3646 6.296259 GGGACTAGTGACTTTTTAATCCCTGA 60.296 42.308 0.00 0.00 40.21 3.86
2973 3647 7.166167 GGACTAGTGACTTTTTAATCCCTGAA 58.834 38.462 0.00 0.00 0.00 3.02
2974 3648 7.664318 GGACTAGTGACTTTTTAATCCCTGAAA 59.336 37.037 0.00 0.00 0.00 2.69
2975 3649 8.990163 ACTAGTGACTTTTTAATCCCTGAAAA 57.010 30.769 0.00 0.00 0.00 2.29
2976 3650 8.847196 ACTAGTGACTTTTTAATCCCTGAAAAC 58.153 33.333 0.00 0.00 0.00 2.43
2977 3651 7.654022 AGTGACTTTTTAATCCCTGAAAACA 57.346 32.000 0.00 0.00 0.00 2.83
2978 3652 8.073467 AGTGACTTTTTAATCCCTGAAAACAA 57.927 30.769 0.00 0.00 0.00 2.83
2979 3653 8.536175 AGTGACTTTTTAATCCCTGAAAACAAA 58.464 29.630 0.00 0.00 0.00 2.83
2980 3654 8.600625 GTGACTTTTTAATCCCTGAAAACAAAC 58.399 33.333 0.00 0.00 0.00 2.93
2981 3655 8.314751 TGACTTTTTAATCCCTGAAAACAAACA 58.685 29.630 0.00 0.00 0.00 2.83
2982 3656 8.716646 ACTTTTTAATCCCTGAAAACAAACAG 57.283 30.769 0.00 0.00 0.00 3.16
2990 3664 5.674933 CCTGAAAACAAACAGGTAGAGAC 57.325 43.478 0.00 0.00 45.82 3.36
2991 3665 5.368989 CCTGAAAACAAACAGGTAGAGACT 58.631 41.667 0.00 0.00 45.82 3.24
2992 3666 5.823045 CCTGAAAACAAACAGGTAGAGACTT 59.177 40.000 0.00 0.00 45.82 3.01
2993 3667 6.318900 CCTGAAAACAAACAGGTAGAGACTTT 59.681 38.462 0.00 0.00 45.82 2.66
2994 3668 7.148069 CCTGAAAACAAACAGGTAGAGACTTTT 60.148 37.037 0.00 0.00 45.82 2.27
2995 3669 8.117813 TGAAAACAAACAGGTAGAGACTTTTT 57.882 30.769 0.00 0.00 0.00 1.94
2996 3670 9.233649 TGAAAACAAACAGGTAGAGACTTTTTA 57.766 29.630 0.00 0.00 0.00 1.52
2997 3671 9.717892 GAAAACAAACAGGTAGAGACTTTTTAG 57.282 33.333 0.00 0.00 0.00 1.85
2998 3672 7.803279 AACAAACAGGTAGAGACTTTTTAGG 57.197 36.000 0.00 0.00 0.00 2.69
2999 3673 7.133133 ACAAACAGGTAGAGACTTTTTAGGA 57.867 36.000 0.00 0.00 0.00 2.94
3000 3674 6.990939 ACAAACAGGTAGAGACTTTTTAGGAC 59.009 38.462 0.00 0.00 0.00 3.85
3001 3675 6.997942 AACAGGTAGAGACTTTTTAGGACT 57.002 37.500 0.00 0.00 0.00 3.85
3002 3676 8.365647 CAAACAGGTAGAGACTTTTTAGGACTA 58.634 37.037 0.00 0.00 0.00 2.59
3003 3677 7.706100 ACAGGTAGAGACTTTTTAGGACTAG 57.294 40.000 0.00 0.00 0.00 2.57
3004 3678 7.468496 ACAGGTAGAGACTTTTTAGGACTAGA 58.532 38.462 0.00 0.00 0.00 2.43
3005 3679 7.612633 ACAGGTAGAGACTTTTTAGGACTAGAG 59.387 40.741 0.00 0.00 0.00 2.43
3006 3680 6.604396 AGGTAGAGACTTTTTAGGACTAGAGC 59.396 42.308 0.00 0.00 0.00 4.09
3007 3681 5.925506 AGAGACTTTTTAGGACTAGAGCC 57.074 43.478 0.00 0.00 0.00 4.70
3008 3682 5.585894 AGAGACTTTTTAGGACTAGAGCCT 58.414 41.667 12.37 12.37 39.56 4.58
3009 3683 6.020389 AGAGACTTTTTAGGACTAGAGCCTT 58.980 40.000 12.85 0.00 36.96 4.35
3010 3684 6.499000 AGAGACTTTTTAGGACTAGAGCCTTT 59.501 38.462 12.85 0.00 36.96 3.11
3011 3685 7.016760 AGAGACTTTTTAGGACTAGAGCCTTTT 59.983 37.037 12.85 0.00 36.96 2.27
3012 3686 7.519057 AGACTTTTTAGGACTAGAGCCTTTTT 58.481 34.615 12.85 0.00 36.96 1.94
3013 3687 8.657712 AGACTTTTTAGGACTAGAGCCTTTTTA 58.342 33.333 12.85 0.00 36.96 1.52
3014 3688 8.850007 ACTTTTTAGGACTAGAGCCTTTTTAG 57.150 34.615 12.85 9.17 36.96 1.85
3015 3689 8.438373 ACTTTTTAGGACTAGAGCCTTTTTAGT 58.562 33.333 12.85 9.62 36.96 2.24
3016 3690 9.286170 CTTTTTAGGACTAGAGCCTTTTTAGTT 57.714 33.333 12.85 0.00 36.96 2.24
3018 3692 9.939802 TTTTAGGACTAGAGCCTTTTTAGTTAG 57.060 33.333 12.85 0.00 36.96 2.34
3019 3693 6.547930 AGGACTAGAGCCTTTTTAGTTAGG 57.452 41.667 0.00 0.00 29.44 2.69
3020 3694 6.262207 AGGACTAGAGCCTTTTTAGTTAGGA 58.738 40.000 0.00 0.00 33.13 2.94
3021 3695 6.154877 AGGACTAGAGCCTTTTTAGTTAGGAC 59.845 42.308 0.00 0.00 33.13 3.85
3022 3696 6.154877 GGACTAGAGCCTTTTTAGTTAGGACT 59.845 42.308 0.00 0.00 39.97 3.85
3023 3697 7.341512 GGACTAGAGCCTTTTTAGTTAGGACTA 59.658 40.741 0.00 0.00 37.33 2.59
3024 3698 8.661752 ACTAGAGCCTTTTTAGTTAGGACTAA 57.338 34.615 0.00 0.00 44.49 2.24
3053 3727 8.934023 AAGTCTTAGGATTTATGAACCAAACA 57.066 30.769 0.00 0.00 0.00 2.83
3054 3728 8.567285 AGTCTTAGGATTTATGAACCAAACAG 57.433 34.615 0.00 0.00 0.00 3.16
3055 3729 7.611855 AGTCTTAGGATTTATGAACCAAACAGG 59.388 37.037 0.00 0.00 45.67 4.00
3056 3730 6.889722 TCTTAGGATTTATGAACCAAACAGGG 59.110 38.462 0.00 0.00 43.89 4.45
3057 3731 3.769300 AGGATTTATGAACCAAACAGGGC 59.231 43.478 0.00 0.00 43.89 5.19
3064 3738 4.323569 TGAACCAAACAGGGCCATAATA 57.676 40.909 6.18 0.00 43.89 0.98
3074 3748 3.384146 CAGGGCCATAATACACAATTGCA 59.616 43.478 6.18 0.00 0.00 4.08
3091 3765 0.597377 GCACGGGTTCCTTTGCTTTG 60.597 55.000 7.58 0.00 30.57 2.77
3104 3778 4.202010 CCTTTGCTTTGTATATTGGTCCCG 60.202 45.833 0.00 0.00 0.00 5.14
3155 3829 1.529438 GATTGGTTCGAGCAAACGTCA 59.471 47.619 0.53 0.00 39.20 4.35
3176 3956 2.159282 AGTTCGCTACAATACTCCCACG 60.159 50.000 0.00 0.00 0.00 4.94
3187 3985 1.373435 CTCCCACGGCACTAACCAA 59.627 57.895 0.00 0.00 0.00 3.67
3216 4014 0.743097 GATGGCCTGCAATGAAGTCC 59.257 55.000 3.32 0.00 0.00 3.85
3219 4017 0.968405 GGCCTGCAATGAAGTCCAAA 59.032 50.000 0.00 0.00 0.00 3.28
3276 4074 0.684153 CCCATCGGACAAGCCCAAAT 60.684 55.000 0.00 0.00 0.00 2.32
3302 4100 4.223255 TGTCATTACCCCGTGAAGAATGTA 59.777 41.667 0.00 0.00 0.00 2.29
3303 4101 5.180271 GTCATTACCCCGTGAAGAATGTAA 58.820 41.667 0.00 0.00 0.00 2.41
3304 4102 5.293569 GTCATTACCCCGTGAAGAATGTAAG 59.706 44.000 0.00 0.00 0.00 2.34
3305 4103 5.188163 TCATTACCCCGTGAAGAATGTAAGA 59.812 40.000 0.00 0.00 0.00 2.10
3306 4104 3.611766 ACCCCGTGAAGAATGTAAGAG 57.388 47.619 0.00 0.00 0.00 2.85
3341 4140 0.038892 GCAATGTTGTGTGCTCCTGG 60.039 55.000 0.00 0.00 37.78 4.45
3342 4141 0.038892 CAATGTTGTGTGCTCCTGGC 60.039 55.000 0.00 0.00 42.22 4.85
3343 4142 1.518056 AATGTTGTGTGCTCCTGGCG 61.518 55.000 0.00 0.00 45.43 5.69
3344 4143 2.280797 GTTGTGTGCTCCTGGCGA 60.281 61.111 0.00 0.00 45.43 5.54
3345 4144 1.891919 GTTGTGTGCTCCTGGCGAA 60.892 57.895 0.00 0.00 45.43 4.70
3346 4145 1.153066 TTGTGTGCTCCTGGCGAAA 60.153 52.632 0.00 0.00 45.43 3.46
3347 4146 0.537143 TTGTGTGCTCCTGGCGAAAT 60.537 50.000 0.00 0.00 45.43 2.17
3348 4147 0.323302 TGTGTGCTCCTGGCGAAATA 59.677 50.000 0.00 0.00 45.43 1.40
3349 4148 1.065491 TGTGTGCTCCTGGCGAAATAT 60.065 47.619 0.00 0.00 45.43 1.28
3350 4149 1.599542 GTGTGCTCCTGGCGAAATATC 59.400 52.381 0.00 0.00 45.43 1.63
3351 4150 1.486310 TGTGCTCCTGGCGAAATATCT 59.514 47.619 0.00 0.00 45.43 1.98
3352 4151 2.698274 TGTGCTCCTGGCGAAATATCTA 59.302 45.455 0.00 0.00 45.43 1.98
3353 4152 3.243873 TGTGCTCCTGGCGAAATATCTAG 60.244 47.826 0.00 0.00 45.43 2.43
3354 4153 2.965831 TGCTCCTGGCGAAATATCTAGT 59.034 45.455 0.00 0.00 45.43 2.57
3355 4154 4.022242 GTGCTCCTGGCGAAATATCTAGTA 60.022 45.833 0.00 0.00 45.43 1.82
3356 4155 4.022242 TGCTCCTGGCGAAATATCTAGTAC 60.022 45.833 0.00 0.00 45.43 2.73
3357 4156 4.218852 GCTCCTGGCGAAATATCTAGTACT 59.781 45.833 0.00 0.00 0.00 2.73
3358 4157 5.620429 GCTCCTGGCGAAATATCTAGTACTC 60.620 48.000 0.00 0.00 0.00 2.59
3359 4158 4.765856 TCCTGGCGAAATATCTAGTACTCC 59.234 45.833 0.00 0.00 0.00 3.85
3360 4159 4.082136 CCTGGCGAAATATCTAGTACTCCC 60.082 50.000 0.00 0.00 0.00 4.30
3361 4160 4.476297 TGGCGAAATATCTAGTACTCCCA 58.524 43.478 0.00 0.00 0.00 4.37
3362 4161 4.280174 TGGCGAAATATCTAGTACTCCCAC 59.720 45.833 0.00 0.00 0.00 4.61
3363 4162 4.321824 GGCGAAATATCTAGTACTCCCACC 60.322 50.000 0.00 0.00 0.00 4.61
3364 4163 4.321824 GCGAAATATCTAGTACTCCCACCC 60.322 50.000 0.00 0.00 0.00 4.61
3365 4164 4.220163 CGAAATATCTAGTACTCCCACCCC 59.780 50.000 0.00 0.00 0.00 4.95
3366 4165 5.404395 GAAATATCTAGTACTCCCACCCCT 58.596 45.833 0.00 0.00 0.00 4.79
3367 4166 6.556644 AAATATCTAGTACTCCCACCCCTA 57.443 41.667 0.00 0.00 0.00 3.53
3368 4167 6.754753 AATATCTAGTACTCCCACCCCTAT 57.245 41.667 0.00 0.00 0.00 2.57
3369 4168 3.897657 TCTAGTACTCCCACCCCTATG 57.102 52.381 0.00 0.00 0.00 2.23
3370 4169 2.449730 TCTAGTACTCCCACCCCTATGG 59.550 54.545 0.00 0.00 39.71 2.74
3379 4178 3.560251 CCCCTATGGTGCTCCCGG 61.560 72.222 1.59 0.00 35.15 5.73
3380 4179 2.768344 CCCTATGGTGCTCCCGGT 60.768 66.667 0.00 0.00 35.15 5.28
3381 4180 2.505982 CCTATGGTGCTCCCGGTG 59.494 66.667 0.00 0.00 35.15 4.94
3382 4181 2.203070 CTATGGTGCTCCCGGTGC 60.203 66.667 0.00 5.06 35.15 5.01
3383 4182 2.687200 TATGGTGCTCCCGGTGCT 60.687 61.111 16.01 0.89 35.15 4.40
3384 4183 2.650813 CTATGGTGCTCCCGGTGCTC 62.651 65.000 16.01 12.62 35.15 4.26
3387 4186 4.329545 GTGCTCCCGGTGCTCCAA 62.330 66.667 16.01 0.00 0.00 3.53
3388 4187 3.565214 TGCTCCCGGTGCTCCAAA 61.565 61.111 16.01 0.00 0.00 3.28
3389 4188 2.044946 GCTCCCGGTGCTCCAAAT 60.045 61.111 0.00 0.00 0.00 2.32
3390 4189 1.678970 GCTCCCGGTGCTCCAAATT 60.679 57.895 0.00 0.00 0.00 1.82
3391 4190 1.250840 GCTCCCGGTGCTCCAAATTT 61.251 55.000 0.00 0.00 0.00 1.82
3392 4191 0.811281 CTCCCGGTGCTCCAAATTTC 59.189 55.000 0.00 0.00 0.00 2.17
3393 4192 0.958382 TCCCGGTGCTCCAAATTTCG 60.958 55.000 0.00 0.00 0.00 3.46
3394 4193 1.506262 CCGGTGCTCCAAATTTCGG 59.494 57.895 5.52 0.00 0.00 4.30
3395 4194 1.241315 CCGGTGCTCCAAATTTCGGT 61.241 55.000 5.52 0.00 0.00 4.69
3396 4195 1.444836 CGGTGCTCCAAATTTCGGTA 58.555 50.000 5.52 0.00 0.00 4.02
3397 4196 1.396996 CGGTGCTCCAAATTTCGGTAG 59.603 52.381 5.52 5.01 0.00 3.18
3398 4197 1.132453 GGTGCTCCAAATTTCGGTAGC 59.868 52.381 0.00 15.60 0.00 3.58
3399 4198 1.810151 GTGCTCCAAATTTCGGTAGCA 59.190 47.619 18.30 18.30 35.62 3.49
3400 4199 1.810151 TGCTCCAAATTTCGGTAGCAC 59.190 47.619 18.30 0.00 34.14 4.40
3401 4200 1.810151 GCTCCAAATTTCGGTAGCACA 59.190 47.619 16.55 0.00 31.18 4.57
3402 4201 2.423538 GCTCCAAATTTCGGTAGCACAT 59.576 45.455 16.55 0.00 31.18 3.21
3403 4202 3.119495 GCTCCAAATTTCGGTAGCACATT 60.119 43.478 16.55 0.00 31.18 2.71
3404 4203 4.618227 GCTCCAAATTTCGGTAGCACATTT 60.618 41.667 16.55 0.00 31.18 2.32
3405 4204 5.461032 TCCAAATTTCGGTAGCACATTTT 57.539 34.783 6.57 0.00 0.00 1.82
3406 4205 5.848406 TCCAAATTTCGGTAGCACATTTTT 58.152 33.333 6.57 0.00 0.00 1.94
3407 4206 6.982852 TCCAAATTTCGGTAGCACATTTTTA 58.017 32.000 6.57 0.00 0.00 1.52
3408 4207 7.434492 TCCAAATTTCGGTAGCACATTTTTAA 58.566 30.769 6.57 0.00 0.00 1.52
3409 4208 7.926555 TCCAAATTTCGGTAGCACATTTTTAAA 59.073 29.630 6.57 0.00 0.00 1.52
3410 4209 8.716909 CCAAATTTCGGTAGCACATTTTTAAAT 58.283 29.630 0.00 0.00 0.00 1.40
3452 4251 5.981088 AAATCCAGCACATTGATACAACA 57.019 34.783 0.00 0.00 0.00 3.33
3453 4252 6.534475 AAATCCAGCACATTGATACAACAT 57.466 33.333 0.00 0.00 0.00 2.71
3454 4253 7.643569 AAATCCAGCACATTGATACAACATA 57.356 32.000 0.00 0.00 0.00 2.29
3455 4254 7.643569 AATCCAGCACATTGATACAACATAA 57.356 32.000 0.00 0.00 0.00 1.90
3456 4255 7.643569 ATCCAGCACATTGATACAACATAAA 57.356 32.000 0.00 0.00 0.00 1.40
3457 4256 7.459795 TCCAGCACATTGATACAACATAAAA 57.540 32.000 0.00 0.00 0.00 1.52
3458 4257 7.537715 TCCAGCACATTGATACAACATAAAAG 58.462 34.615 0.00 0.00 0.00 2.27
3459 4258 7.176515 TCCAGCACATTGATACAACATAAAAGT 59.823 33.333 0.00 0.00 0.00 2.66
3460 4259 8.458052 CCAGCACATTGATACAACATAAAAGTA 58.542 33.333 0.00 0.00 0.00 2.24
3500 4299 9.474920 TTTGAAATCAAAATTCGAAACATAGCT 57.525 25.926 0.00 0.00 42.26 3.32
3501 4300 9.474920 TTGAAATCAAAATTCGAAACATAGCTT 57.525 25.926 0.00 0.00 32.11 3.74
3502 4301 8.914654 TGAAATCAAAATTCGAAACATAGCTTG 58.085 29.630 0.00 0.00 0.00 4.01
3503 4302 9.128107 GAAATCAAAATTCGAAACATAGCTTGA 57.872 29.630 0.00 4.42 0.00 3.02
3504 4303 8.679288 AATCAAAATTCGAAACATAGCTTGAG 57.321 30.769 0.00 0.00 0.00 3.02
3505 4304 7.433708 TCAAAATTCGAAACATAGCTTGAGA 57.566 32.000 0.00 0.00 0.00 3.27
3506 4305 7.870826 TCAAAATTCGAAACATAGCTTGAGAA 58.129 30.769 0.00 0.00 0.00 2.87
3507 4306 8.349245 TCAAAATTCGAAACATAGCTTGAGAAA 58.651 29.630 0.00 0.00 0.00 2.52
3508 4307 8.420189 CAAAATTCGAAACATAGCTTGAGAAAC 58.580 33.333 0.00 0.00 0.00 2.78
3509 4308 6.801539 ATTCGAAACATAGCTTGAGAAACA 57.198 33.333 0.00 0.00 0.00 2.83
3510 4309 6.801539 TTCGAAACATAGCTTGAGAAACAT 57.198 33.333 0.00 0.00 0.00 2.71
3511 4310 7.899178 TTCGAAACATAGCTTGAGAAACATA 57.101 32.000 0.00 0.00 0.00 2.29
3512 4311 7.899178 TCGAAACATAGCTTGAGAAACATAA 57.101 32.000 0.00 0.00 0.00 1.90
3513 4312 8.317891 TCGAAACATAGCTTGAGAAACATAAA 57.682 30.769 0.00 0.00 0.00 1.40
3514 4313 8.946085 TCGAAACATAGCTTGAGAAACATAAAT 58.054 29.630 0.00 0.00 0.00 1.40
3515 4314 9.559958 CGAAACATAGCTTGAGAAACATAAATT 57.440 29.630 0.00 0.00 0.00 1.82
3524 4323 9.214953 GCTTGAGAAACATAAATTACAGATTCG 57.785 33.333 0.00 0.00 0.00 3.34
3527 4326 9.430623 TGAGAAACATAAATTACAGATTCGACA 57.569 29.630 0.00 0.00 0.00 4.35
3528 4327 9.907576 GAGAAACATAAATTACAGATTCGACAG 57.092 33.333 0.00 0.00 0.00 3.51
3529 4328 9.436957 AGAAACATAAATTACAGATTCGACAGT 57.563 29.630 0.00 0.00 0.00 3.55
3540 4339 9.778993 TTACAGATTCGACAGTAAATAGTACAC 57.221 33.333 0.00 0.00 0.00 2.90
3541 4340 7.823665 ACAGATTCGACAGTAAATAGTACACA 58.176 34.615 0.00 0.00 0.00 3.72
3542 4341 8.301720 ACAGATTCGACAGTAAATAGTACACAA 58.698 33.333 0.00 0.00 0.00 3.33
3543 4342 8.584600 CAGATTCGACAGTAAATAGTACACAAC 58.415 37.037 0.00 0.00 0.00 3.32
3544 4343 8.301720 AGATTCGACAGTAAATAGTACACAACA 58.698 33.333 0.00 0.00 0.00 3.33
3545 4344 8.997621 ATTCGACAGTAAATAGTACACAACAT 57.002 30.769 0.00 0.00 0.00 2.71
3547 4346 9.911138 TTCGACAGTAAATAGTACACAACATAA 57.089 29.630 0.00 0.00 0.00 1.90
3548 4347 9.563898 TCGACAGTAAATAGTACACAACATAAG 57.436 33.333 0.00 0.00 0.00 1.73
3549 4348 9.350357 CGACAGTAAATAGTACACAACATAAGT 57.650 33.333 0.00 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 7.566760 TGTGCAACTAACCATATTAGAATGG 57.433 36.000 1.33 1.33 44.77 3.16
108 109 7.279981 AGGTGGCATTTTCTTTGTTCTTTTTAC 59.720 33.333 0.00 0.00 0.00 2.01
158 160 3.975168 AACATAGCGGTTGGTAGTTCT 57.025 42.857 0.00 0.00 0.00 3.01
489 1149 5.363868 TGGTATGCTTATGACTAGCTTGTCT 59.636 40.000 25.17 14.92 39.38 3.41
490 1150 5.601662 TGGTATGCTTATGACTAGCTTGTC 58.398 41.667 19.71 19.71 39.38 3.18
491 1151 5.614324 TGGTATGCTTATGACTAGCTTGT 57.386 39.130 0.00 0.00 39.38 3.16
492 1152 6.128715 CGAATGGTATGCTTATGACTAGCTTG 60.129 42.308 0.00 0.00 39.38 4.01
493 1153 5.928839 CGAATGGTATGCTTATGACTAGCTT 59.071 40.000 0.00 0.00 39.38 3.74
494 1154 5.243954 TCGAATGGTATGCTTATGACTAGCT 59.756 40.000 0.00 0.00 39.38 3.32
495 1155 5.346281 GTCGAATGGTATGCTTATGACTAGC 59.654 44.000 0.00 0.00 39.10 3.42
530 1190 1.478105 CTTTGGAGGGGTAATGCTTGC 59.522 52.381 0.00 0.00 0.00 4.01
570 1230 0.321653 GTGGGTCATCGAGGTTTGCT 60.322 55.000 0.00 0.00 0.00 3.91
572 1232 1.442769 CAGTGGGTCATCGAGGTTTG 58.557 55.000 0.00 0.00 0.00 2.93
590 1250 9.545105 TTCGTTAAGTCTGAGTTTTATTAACCA 57.455 29.630 2.62 0.00 32.24 3.67
607 1267 8.304596 TATCACTTGATTGAGACTTCGTTAAGT 58.695 33.333 0.00 0.00 40.93 2.24
608 1268 7.588143 ATCACTTGATTGAGACTTCGTTAAG 57.412 36.000 0.00 0.00 38.77 1.85
611 1271 9.823647 ATTATATCACTTGATTGAGACTTCGTT 57.176 29.630 0.00 0.00 36.05 3.85
661 1321 8.674263 ATTTTACATGGAGATTTGTGCAAAAA 57.326 26.923 4.10 4.10 33.56 1.94
662 1322 7.930325 TGATTTTACATGGAGATTTGTGCAAAA 59.070 29.630 0.00 0.00 33.56 2.44
663 1323 7.440198 TGATTTTACATGGAGATTTGTGCAAA 58.560 30.769 0.00 0.00 34.46 3.68
664 1324 6.990798 TGATTTTACATGGAGATTTGTGCAA 58.009 32.000 0.00 0.00 0.00 4.08
665 1325 6.587206 TGATTTTACATGGAGATTTGTGCA 57.413 33.333 0.00 0.00 0.00 4.57
666 1326 7.887996 TTTGATTTTACATGGAGATTTGTGC 57.112 32.000 0.00 0.00 0.00 4.57
689 1349 9.799106 ATGTCTTGATCGATAATATCCCTTTTT 57.201 29.630 0.00 0.00 0.00 1.94
692 1352 9.877178 GTTATGTCTTGATCGATAATATCCCTT 57.123 33.333 0.00 0.00 0.00 3.95
693 1353 8.191446 CGTTATGTCTTGATCGATAATATCCCT 58.809 37.037 0.00 0.00 0.00 4.20
694 1354 8.188799 TCGTTATGTCTTGATCGATAATATCCC 58.811 37.037 0.00 0.00 0.00 3.85
695 1355 9.569167 TTCGTTATGTCTTGATCGATAATATCC 57.431 33.333 0.00 0.00 0.00 2.59
698 1358 9.608617 GACTTCGTTATGTCTTGATCGATAATA 57.391 33.333 0.00 0.00 0.00 0.98
699 1359 8.353684 AGACTTCGTTATGTCTTGATCGATAAT 58.646 33.333 0.00 0.00 40.21 1.28
700 1360 7.704271 AGACTTCGTTATGTCTTGATCGATAA 58.296 34.615 0.00 0.00 40.21 1.75
701 1361 7.260558 AGACTTCGTTATGTCTTGATCGATA 57.739 36.000 0.00 0.00 40.21 2.92
702 1362 6.137794 AGACTTCGTTATGTCTTGATCGAT 57.862 37.500 0.00 0.00 40.21 3.59
703 1363 5.562506 AGACTTCGTTATGTCTTGATCGA 57.437 39.130 0.00 0.00 40.21 3.59
704 1364 6.967767 ACTTAGACTTCGTTATGTCTTGATCG 59.032 38.462 0.00 0.00 42.67 3.69
705 1365 7.164498 CGACTTAGACTTCGTTATGTCTTGATC 59.836 40.741 0.00 0.00 42.67 2.92
706 1366 6.967767 CGACTTAGACTTCGTTATGTCTTGAT 59.032 38.462 0.00 0.00 42.67 2.57
707 1367 6.148315 TCGACTTAGACTTCGTTATGTCTTGA 59.852 38.462 0.00 0.00 42.67 3.02
708 1368 6.248839 GTCGACTTAGACTTCGTTATGTCTTG 59.751 42.308 8.70 0.00 42.67 3.02
709 1369 6.313252 GTCGACTTAGACTTCGTTATGTCTT 58.687 40.000 8.70 0.00 42.67 3.01
710 1370 5.867166 GTCGACTTAGACTTCGTTATGTCT 58.133 41.667 8.70 0.00 44.56 3.41
727 1387 6.880942 AGTTTTACTAAGTCTCAGTCGACT 57.119 37.500 13.58 13.58 45.73 4.18
748 1408 9.694137 GACTTAGCCATCGACTTTATTAATAGT 57.306 33.333 0.00 0.00 0.00 2.12
749 1409 9.915629 AGACTTAGCCATCGACTTTATTAATAG 57.084 33.333 0.00 0.00 0.00 1.73
750 1410 9.692749 CAGACTTAGCCATCGACTTTATTAATA 57.307 33.333 0.00 0.00 0.00 0.98
751 1411 7.657761 CCAGACTTAGCCATCGACTTTATTAAT 59.342 37.037 0.00 0.00 0.00 1.40
752 1412 6.984474 CCAGACTTAGCCATCGACTTTATTAA 59.016 38.462 0.00 0.00 0.00 1.40
753 1413 6.462487 CCCAGACTTAGCCATCGACTTTATTA 60.462 42.308 0.00 0.00 0.00 0.98
754 1414 5.360591 CCAGACTTAGCCATCGACTTTATT 58.639 41.667 0.00 0.00 0.00 1.40
755 1415 4.202264 CCCAGACTTAGCCATCGACTTTAT 60.202 45.833 0.00 0.00 0.00 1.40
756 1416 3.132289 CCCAGACTTAGCCATCGACTTTA 59.868 47.826 0.00 0.00 0.00 1.85
757 1417 2.093447 CCCAGACTTAGCCATCGACTTT 60.093 50.000 0.00 0.00 0.00 2.66
758 1418 1.482593 CCCAGACTTAGCCATCGACTT 59.517 52.381 0.00 0.00 0.00 3.01
759 1419 1.115467 CCCAGACTTAGCCATCGACT 58.885 55.000 0.00 0.00 0.00 4.18
760 1420 0.824759 ACCCAGACTTAGCCATCGAC 59.175 55.000 0.00 0.00 0.00 4.20
761 1421 1.112113 GACCCAGACTTAGCCATCGA 58.888 55.000 0.00 0.00 0.00 3.59
762 1422 0.824109 TGACCCAGACTTAGCCATCG 59.176 55.000 0.00 0.00 0.00 3.84
776 1436 7.425606 ACGATTTGCTAAATATCAATTGACCC 58.574 34.615 11.07 0.00 0.00 4.46
798 1458 3.039743 TGTGGGGCCTACAATATTACGA 58.960 45.455 21.44 0.00 0.00 3.43
846 1506 4.978580 GTGCTGACATCCTTTGAAAACTTC 59.021 41.667 0.00 0.00 0.00 3.01
908 1568 0.955428 TCAGGGCTTTGCTTGCGTAG 60.955 55.000 0.00 0.00 0.00 3.51
1503 2169 1.251527 GGAAGGACTGCACGAGGAGA 61.252 60.000 8.59 0.00 36.58 3.71
1716 2382 3.173953 TGGGTTACTCCGGAGAAGTAA 57.826 47.619 37.69 22.67 34.19 2.24
1779 2445 2.190578 GCAGGTTCCTCCATCGGG 59.809 66.667 0.00 0.00 39.02 5.14
1924 2590 6.267928 GTGGTCTGTATGAGTATTCCCATAGT 59.732 42.308 0.00 0.00 0.00 2.12
2277 2943 1.407437 CCATAGAAGGCTGAGGCGTTT 60.407 52.381 0.00 0.00 44.97 3.60
2427 3093 2.801631 GGCCTGATCCTCCCAGTCG 61.802 68.421 0.00 0.00 0.00 4.18
2618 3292 4.378774 TGCCAATGGACAACTGAAAATTG 58.621 39.130 2.05 0.00 0.00 2.32
2651 3325 2.113860 TCTGCTGGCTATTGTTCCAC 57.886 50.000 0.00 0.00 0.00 4.02
2663 3337 4.321750 GGGATGCATTGATAATTCTGCTGG 60.322 45.833 0.00 0.00 35.66 4.85
2704 3378 2.825532 CTGGAAACAAACACCCCCTATG 59.174 50.000 0.00 0.00 42.06 2.23
2705 3379 2.225267 CCTGGAAACAAACACCCCCTAT 60.225 50.000 0.00 0.00 42.06 2.57
2706 3380 1.146152 CCTGGAAACAAACACCCCCTA 59.854 52.381 0.00 0.00 42.06 3.53
2707 3381 0.105709 CCTGGAAACAAACACCCCCT 60.106 55.000 0.00 0.00 42.06 4.79
2708 3382 0.105913 TCCTGGAAACAAACACCCCC 60.106 55.000 0.00 0.00 42.06 5.40
2709 3383 1.037493 GTCCTGGAAACAAACACCCC 58.963 55.000 0.00 0.00 42.06 4.95
2710 3384 2.067365 AGTCCTGGAAACAAACACCC 57.933 50.000 0.00 0.00 42.06 4.61
2711 3385 4.465632 AAAAGTCCTGGAAACAAACACC 57.534 40.909 0.00 0.00 42.06 4.16
2712 3386 4.629634 CCAAAAAGTCCTGGAAACAAACAC 59.370 41.667 0.00 0.00 42.06 3.32
2713 3387 4.284746 ACCAAAAAGTCCTGGAAACAAACA 59.715 37.500 0.00 0.00 42.06 2.83
2714 3388 4.629634 CACCAAAAAGTCCTGGAAACAAAC 59.370 41.667 0.00 0.00 42.06 2.93
2715 3389 4.284746 ACACCAAAAAGTCCTGGAAACAAA 59.715 37.500 0.00 0.00 42.06 2.83
2716 3390 3.835395 ACACCAAAAAGTCCTGGAAACAA 59.165 39.130 0.00 0.00 42.06 2.83
2717 3391 3.436243 ACACCAAAAAGTCCTGGAAACA 58.564 40.909 0.00 0.00 36.49 2.83
2718 3392 4.037565 CCTACACCAAAAAGTCCTGGAAAC 59.962 45.833 0.00 0.00 36.49 2.78
2719 3393 4.079672 TCCTACACCAAAAAGTCCTGGAAA 60.080 41.667 0.00 0.00 36.49 3.13
2720 3394 3.460340 TCCTACACCAAAAAGTCCTGGAA 59.540 43.478 0.00 0.00 36.49 3.53
2721 3395 3.050089 TCCTACACCAAAAAGTCCTGGA 58.950 45.455 0.00 0.00 36.49 3.86
2722 3396 3.502123 TCCTACACCAAAAAGTCCTGG 57.498 47.619 0.00 0.00 38.77 4.45
2723 3397 4.461198 AGTTCCTACACCAAAAAGTCCTG 58.539 43.478 0.00 0.00 0.00 3.86
2724 3398 4.790718 AGTTCCTACACCAAAAAGTCCT 57.209 40.909 0.00 0.00 0.00 3.85
2725 3399 6.947644 TTTAGTTCCTACACCAAAAAGTCC 57.052 37.500 0.00 0.00 0.00 3.85
2753 3427 6.356186 TGTTAAAAAGTCTCTAGGAGGGAC 57.644 41.667 0.00 0.00 0.00 4.46
2754 3428 7.147444 TGTTTGTTAAAAAGTCTCTAGGAGGGA 60.147 37.037 0.00 0.00 0.00 4.20
2755 3429 6.996282 TGTTTGTTAAAAAGTCTCTAGGAGGG 59.004 38.462 0.00 0.00 0.00 4.30
2756 3430 7.173390 CCTGTTTGTTAAAAAGTCTCTAGGAGG 59.827 40.741 0.00 0.00 0.00 4.30
2757 3431 7.931948 TCCTGTTTGTTAAAAAGTCTCTAGGAG 59.068 37.037 0.00 0.00 0.00 3.69
2758 3432 7.798071 TCCTGTTTGTTAAAAAGTCTCTAGGA 58.202 34.615 0.00 0.00 0.00 2.94
2759 3433 7.173390 CCTCCTGTTTGTTAAAAAGTCTCTAGG 59.827 40.741 0.00 0.00 0.00 3.02
2760 3434 7.715686 ACCTCCTGTTTGTTAAAAAGTCTCTAG 59.284 37.037 0.00 0.00 0.00 2.43
2761 3435 7.571025 ACCTCCTGTTTGTTAAAAAGTCTCTA 58.429 34.615 0.00 0.00 0.00 2.43
2762 3436 6.424032 ACCTCCTGTTTGTTAAAAAGTCTCT 58.576 36.000 0.00 0.00 0.00 3.10
2763 3437 6.694877 ACCTCCTGTTTGTTAAAAAGTCTC 57.305 37.500 0.00 0.00 0.00 3.36
2764 3438 6.436218 ACAACCTCCTGTTTGTTAAAAAGTCT 59.564 34.615 0.00 0.00 34.00 3.24
2765 3439 6.627243 ACAACCTCCTGTTTGTTAAAAAGTC 58.373 36.000 0.00 0.00 34.00 3.01
2766 3440 6.599356 ACAACCTCCTGTTTGTTAAAAAGT 57.401 33.333 0.00 0.00 34.00 2.66
2767 3441 7.899178 AAACAACCTCCTGTTTGTTAAAAAG 57.101 32.000 1.12 0.00 45.52 2.27
2768 3442 8.678593 AAAAACAACCTCCTGTTTGTTAAAAA 57.321 26.923 2.70 0.00 46.32 1.94
2790 3464 9.862149 AGAGTCTTCTTTATTTAGTCCCAAAAA 57.138 29.630 0.00 0.00 0.00 1.94
2791 3465 9.503399 GAGAGTCTTCTTTATTTAGTCCCAAAA 57.497 33.333 0.00 0.00 32.53 2.44
2792 3466 8.656806 TGAGAGTCTTCTTTATTTAGTCCCAAA 58.343 33.333 0.00 0.00 32.53 3.28
2793 3467 8.202461 TGAGAGTCTTCTTTATTTAGTCCCAA 57.798 34.615 0.00 0.00 32.53 4.12
2794 3468 7.792364 TGAGAGTCTTCTTTATTTAGTCCCA 57.208 36.000 0.00 0.00 32.53 4.37
2795 3469 7.766738 CCTTGAGAGTCTTCTTTATTTAGTCCC 59.233 40.741 0.00 0.00 32.53 4.46
2796 3470 8.532819 TCCTTGAGAGTCTTCTTTATTTAGTCC 58.467 37.037 0.00 0.00 32.53 3.85
2830 3504 5.126222 GGAAAAATCCCAAAAGGTGCAAAAA 59.874 36.000 0.00 0.00 36.75 1.94
2831 3505 4.642437 GGAAAAATCCCAAAAGGTGCAAAA 59.358 37.500 0.00 0.00 36.75 2.44
2832 3506 4.203226 GGAAAAATCCCAAAAGGTGCAAA 58.797 39.130 0.00 0.00 36.75 3.68
2833 3507 3.200825 TGGAAAAATCCCAAAAGGTGCAA 59.799 39.130 0.00 0.00 36.75 4.08
2834 3508 2.774234 TGGAAAAATCCCAAAAGGTGCA 59.226 40.909 0.00 0.00 36.75 4.57
2835 3509 3.483808 TGGAAAAATCCCAAAAGGTGC 57.516 42.857 0.00 0.00 36.75 5.01
2836 3510 4.775236 TGTTGGAAAAATCCCAAAAGGTG 58.225 39.130 0.00 0.00 44.41 4.00
2837 3511 5.443230 TTGTTGGAAAAATCCCAAAAGGT 57.557 34.783 0.00 0.00 44.41 3.50
2838 3512 5.278414 GCATTGTTGGAAAAATCCCAAAAGG 60.278 40.000 0.00 0.00 44.41 3.11
2839 3513 5.278414 GGCATTGTTGGAAAAATCCCAAAAG 60.278 40.000 0.00 0.00 44.41 2.27
2840 3514 4.582240 GGCATTGTTGGAAAAATCCCAAAA 59.418 37.500 0.00 0.00 44.41 2.44
2841 3515 4.140536 GGCATTGTTGGAAAAATCCCAAA 58.859 39.130 0.00 0.00 44.41 3.28
2842 3516 3.497584 GGGCATTGTTGGAAAAATCCCAA 60.498 43.478 0.00 0.00 41.04 4.12
2843 3517 2.039613 GGGCATTGTTGGAAAAATCCCA 59.960 45.455 0.00 0.00 0.00 4.37
2844 3518 2.617788 GGGGCATTGTTGGAAAAATCCC 60.618 50.000 0.00 0.00 0.00 3.85
2845 3519 2.305635 AGGGGCATTGTTGGAAAAATCC 59.694 45.455 0.00 0.00 0.00 3.01
2846 3520 3.599343 GAGGGGCATTGTTGGAAAAATC 58.401 45.455 0.00 0.00 0.00 2.17
2847 3521 2.305635 GGAGGGGCATTGTTGGAAAAAT 59.694 45.455 0.00 0.00 0.00 1.82
2848 3522 1.696884 GGAGGGGCATTGTTGGAAAAA 59.303 47.619 0.00 0.00 0.00 1.94
2849 3523 1.347062 GGAGGGGCATTGTTGGAAAA 58.653 50.000 0.00 0.00 0.00 2.29
2850 3524 0.544120 GGGAGGGGCATTGTTGGAAA 60.544 55.000 0.00 0.00 0.00 3.13
2851 3525 1.078347 GGGAGGGGCATTGTTGGAA 59.922 57.895 0.00 0.00 0.00 3.53
2852 3526 1.856873 AGGGAGGGGCATTGTTGGA 60.857 57.895 0.00 0.00 0.00 3.53
2853 3527 1.683365 CAGGGAGGGGCATTGTTGG 60.683 63.158 0.00 0.00 0.00 3.77
2854 3528 2.353610 GCAGGGAGGGGCATTGTTG 61.354 63.158 0.00 0.00 0.00 3.33
2855 3529 2.037847 GCAGGGAGGGGCATTGTT 59.962 61.111 0.00 0.00 0.00 2.83
2856 3530 3.267233 TGCAGGGAGGGGCATTGT 61.267 61.111 0.00 0.00 34.58 2.71
2857 3531 2.757099 GTGCAGGGAGGGGCATTG 60.757 66.667 0.00 0.00 42.75 2.82
2858 3532 4.066139 GGTGCAGGGAGGGGCATT 62.066 66.667 0.00 0.00 42.75 3.56
2862 3536 1.580066 TTAATGGGTGCAGGGAGGGG 61.580 60.000 0.00 0.00 0.00 4.79
2863 3537 0.557729 ATTAATGGGTGCAGGGAGGG 59.442 55.000 0.00 0.00 0.00 4.30
2864 3538 3.222603 GTTATTAATGGGTGCAGGGAGG 58.777 50.000 0.00 0.00 0.00 4.30
2865 3539 3.117512 AGGTTATTAATGGGTGCAGGGAG 60.118 47.826 0.00 0.00 0.00 4.30
2866 3540 2.856231 AGGTTATTAATGGGTGCAGGGA 59.144 45.455 0.00 0.00 0.00 4.20
2867 3541 3.312736 AGGTTATTAATGGGTGCAGGG 57.687 47.619 0.00 0.00 0.00 4.45
2868 3542 4.141959 CCAAAGGTTATTAATGGGTGCAGG 60.142 45.833 0.00 0.00 0.00 4.85
2869 3543 4.141959 CCCAAAGGTTATTAATGGGTGCAG 60.142 45.833 0.00 0.00 44.67 4.41
2870 3544 3.772025 CCCAAAGGTTATTAATGGGTGCA 59.228 43.478 0.00 0.00 44.67 4.57
2871 3545 4.400529 CCCAAAGGTTATTAATGGGTGC 57.599 45.455 0.00 0.00 44.67 5.01
2892 3566 2.854736 TGTTACCCTAGTAGTCCCCC 57.145 55.000 0.00 0.00 0.00 5.40
2893 3567 2.970640 CCATGTTACCCTAGTAGTCCCC 59.029 54.545 0.00 0.00 0.00 4.81
2894 3568 3.640498 GACCATGTTACCCTAGTAGTCCC 59.360 52.174 0.00 0.00 0.00 4.46
2895 3569 4.544683 AGACCATGTTACCCTAGTAGTCC 58.455 47.826 0.00 0.00 0.00 3.85
2896 3570 6.541934 AAAGACCATGTTACCCTAGTAGTC 57.458 41.667 0.00 0.00 0.00 2.59
2897 3571 6.947376 AAAAGACCATGTTACCCTAGTAGT 57.053 37.500 0.00 0.00 0.00 2.73
2898 3572 7.844009 TGTAAAAGACCATGTTACCCTAGTAG 58.156 38.462 0.00 0.00 0.00 2.57
2899 3573 7.795534 TGTAAAAGACCATGTTACCCTAGTA 57.204 36.000 0.00 0.00 0.00 1.82
2900 3574 6.691255 TGTAAAAGACCATGTTACCCTAGT 57.309 37.500 0.00 0.00 0.00 2.57
2901 3575 7.553881 CATGTAAAAGACCATGTTACCCTAG 57.446 40.000 0.00 0.00 34.97 3.02
2921 3595 9.408648 CTCCCTAAAGGTTATTAAATGACATGT 57.591 33.333 0.00 0.00 36.75 3.21
2922 3596 8.850156 CCTCCCTAAAGGTTATTAAATGACATG 58.150 37.037 0.00 0.00 36.75 3.21
2923 3597 8.004801 CCCTCCCTAAAGGTTATTAAATGACAT 58.995 37.037 0.00 0.00 36.75 3.06
2924 3598 7.184936 TCCCTCCCTAAAGGTTATTAAATGACA 59.815 37.037 0.00 0.00 36.75 3.58
2925 3599 7.501559 GTCCCTCCCTAAAGGTTATTAAATGAC 59.498 40.741 0.00 0.00 36.75 3.06
2926 3600 7.407918 AGTCCCTCCCTAAAGGTTATTAAATGA 59.592 37.037 0.00 0.00 36.75 2.57
2927 3601 7.583625 AGTCCCTCCCTAAAGGTTATTAAATG 58.416 38.462 0.00 0.00 36.75 2.32
2928 3602 7.782695 AGTCCCTCCCTAAAGGTTATTAAAT 57.217 36.000 0.00 0.00 36.75 1.40
2929 3603 7.908371 ACTAGTCCCTCCCTAAAGGTTATTAAA 59.092 37.037 0.00 0.00 36.75 1.52
2930 3604 7.346436 CACTAGTCCCTCCCTAAAGGTTATTAA 59.654 40.741 0.00 0.00 36.75 1.40
2931 3605 6.842807 CACTAGTCCCTCCCTAAAGGTTATTA 59.157 42.308 0.00 0.00 36.75 0.98
2932 3606 5.666265 CACTAGTCCCTCCCTAAAGGTTATT 59.334 44.000 0.00 0.00 36.75 1.40
2933 3607 5.042827 TCACTAGTCCCTCCCTAAAGGTTAT 60.043 44.000 0.00 0.00 36.75 1.89
2934 3608 4.295775 TCACTAGTCCCTCCCTAAAGGTTA 59.704 45.833 0.00 0.00 36.75 2.85
2935 3609 3.078612 TCACTAGTCCCTCCCTAAAGGTT 59.921 47.826 0.00 0.00 36.75 3.50
2936 3610 2.658489 TCACTAGTCCCTCCCTAAAGGT 59.342 50.000 0.00 0.00 36.75 3.50
2937 3611 3.032459 GTCACTAGTCCCTCCCTAAAGG 58.968 54.545 0.00 0.00 36.08 3.11
2938 3612 3.983821 AGTCACTAGTCCCTCCCTAAAG 58.016 50.000 0.00 0.00 0.00 1.85
2939 3613 4.415224 AAGTCACTAGTCCCTCCCTAAA 57.585 45.455 0.00 0.00 0.00 1.85
2940 3614 4.415224 AAAGTCACTAGTCCCTCCCTAA 57.585 45.455 0.00 0.00 0.00 2.69
2941 3615 4.415224 AAAAGTCACTAGTCCCTCCCTA 57.585 45.455 0.00 0.00 0.00 3.53
2942 3616 3.277416 AAAAGTCACTAGTCCCTCCCT 57.723 47.619 0.00 0.00 0.00 4.20
2943 3617 5.494390 TTAAAAAGTCACTAGTCCCTCCC 57.506 43.478 0.00 0.00 0.00 4.30
2944 3618 6.114089 GGATTAAAAAGTCACTAGTCCCTCC 58.886 44.000 0.00 0.00 0.00 4.30
2945 3619 6.070136 AGGGATTAAAAAGTCACTAGTCCCTC 60.070 42.308 3.05 0.00 44.48 4.30
2946 3620 5.791141 AGGGATTAAAAAGTCACTAGTCCCT 59.209 40.000 3.05 3.05 43.52 4.20
2947 3621 5.880887 CAGGGATTAAAAAGTCACTAGTCCC 59.119 44.000 0.00 0.00 40.32 4.46
2948 3622 6.708285 TCAGGGATTAAAAAGTCACTAGTCC 58.292 40.000 0.00 0.00 0.00 3.85
2949 3623 8.617290 TTTCAGGGATTAAAAAGTCACTAGTC 57.383 34.615 0.00 0.00 0.00 2.59
2950 3624 8.847196 GTTTTCAGGGATTAAAAAGTCACTAGT 58.153 33.333 0.00 0.00 0.00 2.57
2951 3625 8.846211 TGTTTTCAGGGATTAAAAAGTCACTAG 58.154 33.333 0.00 0.00 0.00 2.57
2952 3626 8.754991 TGTTTTCAGGGATTAAAAAGTCACTA 57.245 30.769 0.00 0.00 0.00 2.74
2953 3627 7.654022 TGTTTTCAGGGATTAAAAAGTCACT 57.346 32.000 0.00 0.00 0.00 3.41
2954 3628 8.600625 GTTTGTTTTCAGGGATTAAAAAGTCAC 58.399 33.333 0.00 0.00 0.00 3.67
2955 3629 8.314751 TGTTTGTTTTCAGGGATTAAAAAGTCA 58.685 29.630 0.00 0.00 0.00 3.41
2956 3630 8.710835 TGTTTGTTTTCAGGGATTAAAAAGTC 57.289 30.769 0.00 0.00 0.00 3.01
2957 3631 7.768582 CCTGTTTGTTTTCAGGGATTAAAAAGT 59.231 33.333 3.58 0.00 45.11 2.66
2958 3632 8.141835 CCTGTTTGTTTTCAGGGATTAAAAAG 57.858 34.615 3.58 0.00 45.11 2.27
2969 3643 6.927294 AAGTCTCTACCTGTTTGTTTTCAG 57.073 37.500 0.00 0.00 0.00 3.02
2970 3644 7.696992 AAAAGTCTCTACCTGTTTGTTTTCA 57.303 32.000 0.00 0.00 0.00 2.69
2971 3645 9.717892 CTAAAAAGTCTCTACCTGTTTGTTTTC 57.282 33.333 0.00 0.00 0.00 2.29
2972 3646 8.683615 CCTAAAAAGTCTCTACCTGTTTGTTTT 58.316 33.333 0.00 0.00 0.00 2.43
2973 3647 8.050930 TCCTAAAAAGTCTCTACCTGTTTGTTT 58.949 33.333 0.00 0.00 0.00 2.83
2974 3648 7.498239 GTCCTAAAAAGTCTCTACCTGTTTGTT 59.502 37.037 0.00 0.00 0.00 2.83
2975 3649 6.990939 GTCCTAAAAAGTCTCTACCTGTTTGT 59.009 38.462 0.00 0.00 0.00 2.83
2976 3650 7.217906 AGTCCTAAAAAGTCTCTACCTGTTTG 58.782 38.462 0.00 0.00 0.00 2.93
2977 3651 7.376335 AGTCCTAAAAAGTCTCTACCTGTTT 57.624 36.000 0.00 0.00 0.00 2.83
2978 3652 6.997942 AGTCCTAAAAAGTCTCTACCTGTT 57.002 37.500 0.00 0.00 0.00 3.16
2979 3653 7.468496 TCTAGTCCTAAAAAGTCTCTACCTGT 58.532 38.462 0.00 0.00 0.00 4.00
2980 3654 7.415877 GCTCTAGTCCTAAAAAGTCTCTACCTG 60.416 44.444 0.00 0.00 0.00 4.00
2981 3655 6.604396 GCTCTAGTCCTAAAAAGTCTCTACCT 59.396 42.308 0.00 0.00 0.00 3.08
2982 3656 6.183360 GGCTCTAGTCCTAAAAAGTCTCTACC 60.183 46.154 0.00 0.00 0.00 3.18
2983 3657 6.604396 AGGCTCTAGTCCTAAAAAGTCTCTAC 59.396 42.308 4.80 0.00 30.79 2.59
2984 3658 6.733509 AGGCTCTAGTCCTAAAAAGTCTCTA 58.266 40.000 4.80 0.00 30.79 2.43
2985 3659 5.585894 AGGCTCTAGTCCTAAAAAGTCTCT 58.414 41.667 4.80 0.00 30.79 3.10
2986 3660 5.925506 AGGCTCTAGTCCTAAAAAGTCTC 57.074 43.478 4.80 0.00 30.79 3.36
2987 3661 6.689663 AAAGGCTCTAGTCCTAAAAAGTCT 57.310 37.500 6.72 0.00 32.65 3.24
2988 3662 7.747155 AAAAAGGCTCTAGTCCTAAAAAGTC 57.253 36.000 6.72 0.00 32.65 3.01
2989 3663 8.438373 ACTAAAAAGGCTCTAGTCCTAAAAAGT 58.562 33.333 6.72 6.44 32.65 2.66
2990 3664 8.850007 ACTAAAAAGGCTCTAGTCCTAAAAAG 57.150 34.615 6.72 5.98 32.65 2.27
2992 3666 9.939802 CTAACTAAAAAGGCTCTAGTCCTAAAA 57.060 33.333 6.72 0.00 32.65 1.52
2993 3667 8.537858 CCTAACTAAAAAGGCTCTAGTCCTAAA 58.462 37.037 6.72 0.00 32.65 1.85
2994 3668 7.897565 TCCTAACTAAAAAGGCTCTAGTCCTAA 59.102 37.037 6.72 0.00 32.65 2.69
2995 3669 7.341512 GTCCTAACTAAAAAGGCTCTAGTCCTA 59.658 40.741 6.72 0.00 32.65 2.94
2996 3670 6.154877 GTCCTAACTAAAAAGGCTCTAGTCCT 59.845 42.308 4.84 1.28 34.90 3.85
2997 3671 6.154877 AGTCCTAACTAAAAAGGCTCTAGTCC 59.845 42.308 4.84 0.00 32.59 3.85
2998 3672 7.172868 AGTCCTAACTAAAAAGGCTCTAGTC 57.827 40.000 4.84 0.00 32.59 2.59
2999 3673 8.661752 TTAGTCCTAACTAAAAAGGCTCTAGT 57.338 34.615 0.00 0.00 43.38 2.57
3027 3701 9.362151 TGTTTGGTTCATAAATCCTAAGACTTT 57.638 29.630 0.00 0.00 0.00 2.66
3028 3702 8.934023 TGTTTGGTTCATAAATCCTAAGACTT 57.066 30.769 0.00 0.00 0.00 3.01
3029 3703 7.611855 CCTGTTTGGTTCATAAATCCTAAGACT 59.388 37.037 0.00 0.00 0.00 3.24
3030 3704 7.148069 CCCTGTTTGGTTCATAAATCCTAAGAC 60.148 40.741 0.00 0.00 0.00 3.01
3031 3705 6.889722 CCCTGTTTGGTTCATAAATCCTAAGA 59.110 38.462 0.00 0.00 0.00 2.10
3032 3706 6.405842 GCCCTGTTTGGTTCATAAATCCTAAG 60.406 42.308 0.00 0.00 0.00 2.18
3033 3707 5.420739 GCCCTGTTTGGTTCATAAATCCTAA 59.579 40.000 0.00 0.00 0.00 2.69
3034 3708 4.953579 GCCCTGTTTGGTTCATAAATCCTA 59.046 41.667 0.00 0.00 0.00 2.94
3035 3709 3.769300 GCCCTGTTTGGTTCATAAATCCT 59.231 43.478 0.00 0.00 0.00 3.24
3036 3710 3.118775 GGCCCTGTTTGGTTCATAAATCC 60.119 47.826 0.00 0.00 0.00 3.01
3037 3711 3.513515 TGGCCCTGTTTGGTTCATAAATC 59.486 43.478 0.00 0.00 0.00 2.17
3038 3712 3.515562 TGGCCCTGTTTGGTTCATAAAT 58.484 40.909 0.00 0.00 0.00 1.40
3039 3713 2.964209 TGGCCCTGTTTGGTTCATAAA 58.036 42.857 0.00 0.00 0.00 1.40
3040 3714 2.685106 TGGCCCTGTTTGGTTCATAA 57.315 45.000 0.00 0.00 0.00 1.90
3041 3715 2.917713 ATGGCCCTGTTTGGTTCATA 57.082 45.000 0.00 0.00 0.00 2.15
3042 3716 2.917713 TATGGCCCTGTTTGGTTCAT 57.082 45.000 0.00 0.00 33.37 2.57
3043 3717 2.685106 TTATGGCCCTGTTTGGTTCA 57.315 45.000 0.00 0.00 0.00 3.18
3044 3718 4.020543 TGTATTATGGCCCTGTTTGGTTC 58.979 43.478 0.00 0.00 0.00 3.62
3045 3719 3.767131 GTGTATTATGGCCCTGTTTGGTT 59.233 43.478 0.00 0.00 0.00 3.67
3046 3720 3.245443 TGTGTATTATGGCCCTGTTTGGT 60.245 43.478 0.00 0.00 0.00 3.67
3047 3721 3.360867 TGTGTATTATGGCCCTGTTTGG 58.639 45.455 0.00 0.00 0.00 3.28
3048 3722 5.596836 ATTGTGTATTATGGCCCTGTTTG 57.403 39.130 0.00 0.00 0.00 2.93
3049 3723 5.626578 GCAATTGTGTATTATGGCCCTGTTT 60.627 40.000 7.40 0.00 0.00 2.83
3050 3724 4.141959 GCAATTGTGTATTATGGCCCTGTT 60.142 41.667 7.40 0.00 0.00 3.16
3051 3725 3.384467 GCAATTGTGTATTATGGCCCTGT 59.616 43.478 7.40 0.00 0.00 4.00
3052 3726 3.384146 TGCAATTGTGTATTATGGCCCTG 59.616 43.478 7.40 0.00 0.00 4.45
3053 3727 3.384467 GTGCAATTGTGTATTATGGCCCT 59.616 43.478 7.40 0.00 0.00 5.19
3054 3728 3.716601 GTGCAATTGTGTATTATGGCCC 58.283 45.455 7.40 0.00 0.00 5.80
3055 3729 3.371168 CGTGCAATTGTGTATTATGGCC 58.629 45.455 7.40 0.00 0.00 5.36
3056 3730 3.371168 CCGTGCAATTGTGTATTATGGC 58.629 45.455 7.40 0.00 0.00 4.40
3057 3731 3.380004 ACCCGTGCAATTGTGTATTATGG 59.620 43.478 7.40 2.57 0.00 2.74
3064 3738 0.467290 AGGAACCCGTGCAATTGTGT 60.467 50.000 7.40 0.00 0.00 3.72
3074 3748 2.351706 TACAAAGCAAAGGAACCCGT 57.648 45.000 0.00 0.00 0.00 5.28
3091 3765 4.789012 TCGTTATCCGGGACCAATATAC 57.211 45.455 0.00 0.00 37.11 1.47
3148 3822 4.553323 AGTATTGTAGCGAACTGACGTTT 58.447 39.130 0.00 0.00 32.39 3.60
3153 3827 3.093814 TGGGAGTATTGTAGCGAACTGA 58.906 45.455 0.00 0.00 0.00 3.41
3155 3829 2.159282 CGTGGGAGTATTGTAGCGAACT 60.159 50.000 0.00 0.00 0.00 3.01
3276 4074 5.423704 TTCTTCACGGGGTAATGACATTA 57.576 39.130 3.68 3.68 0.00 1.90
3341 4140 4.321824 GGGTGGGAGTACTAGATATTTCGC 60.322 50.000 0.00 0.00 0.00 4.70
3342 4141 4.220163 GGGGTGGGAGTACTAGATATTTCG 59.780 50.000 0.00 0.00 0.00 3.46
3343 4142 5.404395 AGGGGTGGGAGTACTAGATATTTC 58.596 45.833 0.00 0.00 0.00 2.17
3344 4143 5.435545 AGGGGTGGGAGTACTAGATATTT 57.564 43.478 0.00 0.00 0.00 1.40
3345 4144 6.503944 CATAGGGGTGGGAGTACTAGATATT 58.496 44.000 0.00 0.00 0.00 1.28
3346 4145 5.043281 CCATAGGGGTGGGAGTACTAGATAT 60.043 48.000 0.00 0.00 35.55 1.63
3347 4146 4.294168 CCATAGGGGTGGGAGTACTAGATA 59.706 50.000 0.00 0.00 35.55 1.98
3348 4147 3.077695 CCATAGGGGTGGGAGTACTAGAT 59.922 52.174 0.00 0.00 35.55 1.98
3349 4148 2.449730 CCATAGGGGTGGGAGTACTAGA 59.550 54.545 0.00 0.00 35.55 2.43
3350 4149 2.890814 CCATAGGGGTGGGAGTACTAG 58.109 57.143 0.00 0.00 35.55 2.57
3352 4151 3.970426 CCATAGGGGTGGGAGTACT 57.030 57.895 0.00 0.00 35.55 2.73
3362 4161 3.560251 CCGGGAGCACCATAGGGG 61.560 72.222 1.58 0.00 44.81 4.79
3363 4162 2.768344 ACCGGGAGCACCATAGGG 60.768 66.667 6.32 0.00 40.22 3.53
3364 4163 2.505982 CACCGGGAGCACCATAGG 59.494 66.667 6.32 4.82 40.22 2.57
3365 4164 2.203070 GCACCGGGAGCACCATAG 60.203 66.667 15.32 0.00 40.22 2.23
3366 4165 2.687200 AGCACCGGGAGCACCATA 60.687 61.111 21.10 0.00 40.22 2.74
3367 4166 4.101448 GAGCACCGGGAGCACCAT 62.101 66.667 21.10 2.45 40.22 3.55
3370 4169 3.842925 TTTGGAGCACCGGGAGCAC 62.843 63.158 21.10 15.32 39.42 4.40
3371 4170 2.424842 AATTTGGAGCACCGGGAGCA 62.425 55.000 21.10 2.67 39.42 4.26
3372 4171 1.250840 AAATTTGGAGCACCGGGAGC 61.251 55.000 6.32 10.14 39.42 4.70
3373 4172 0.811281 GAAATTTGGAGCACCGGGAG 59.189 55.000 6.32 0.00 39.42 4.30
3374 4173 0.958382 CGAAATTTGGAGCACCGGGA 60.958 55.000 6.32 0.00 39.42 5.14
3375 4174 1.506262 CGAAATTTGGAGCACCGGG 59.494 57.895 6.32 0.00 39.42 5.73
3376 4175 1.241315 ACCGAAATTTGGAGCACCGG 61.241 55.000 6.21 0.00 41.04 5.28
3377 4176 1.396996 CTACCGAAATTTGGAGCACCG 59.603 52.381 6.21 0.95 39.42 4.94
3378 4177 1.132453 GCTACCGAAATTTGGAGCACC 59.868 52.381 6.21 0.00 32.99 5.01
3379 4178 1.810151 TGCTACCGAAATTTGGAGCAC 59.190 47.619 16.92 2.36 35.88 4.40
3380 4179 1.810151 GTGCTACCGAAATTTGGAGCA 59.190 47.619 16.92 16.92 37.33 4.26
3381 4180 1.810151 TGTGCTACCGAAATTTGGAGC 59.190 47.619 6.21 10.76 33.21 4.70
3382 4181 4.701956 AATGTGCTACCGAAATTTGGAG 57.298 40.909 6.21 0.75 0.00 3.86
3383 4182 5.461032 AAAATGTGCTACCGAAATTTGGA 57.539 34.783 6.21 0.00 0.00 3.53
3384 4183 7.644986 TTAAAAATGTGCTACCGAAATTTGG 57.355 32.000 0.00 0.00 0.00 3.28
3385 4184 9.527566 CATTTAAAAATGTGCTACCGAAATTTG 57.472 29.630 0.00 0.00 40.61 2.32
3428 4227 6.757237 TGTTGTATCAATGTGCTGGATTTTT 58.243 32.000 0.00 0.00 0.00 1.94
3429 4228 6.343716 TGTTGTATCAATGTGCTGGATTTT 57.656 33.333 0.00 0.00 0.00 1.82
3430 4229 5.981088 TGTTGTATCAATGTGCTGGATTT 57.019 34.783 0.00 0.00 0.00 2.17
3431 4230 7.643569 TTATGTTGTATCAATGTGCTGGATT 57.356 32.000 0.00 0.00 0.00 3.01
3432 4231 7.643569 TTTATGTTGTATCAATGTGCTGGAT 57.356 32.000 0.00 0.00 0.00 3.41
3433 4232 7.176515 ACTTTTATGTTGTATCAATGTGCTGGA 59.823 33.333 0.00 0.00 0.00 3.86
3434 4233 7.315142 ACTTTTATGTTGTATCAATGTGCTGG 58.685 34.615 0.00 0.00 0.00 4.85
3437 4236 9.787532 ACATACTTTTATGTTGTATCAATGTGC 57.212 29.630 0.00 0.00 45.14 4.57
3474 4273 9.474920 AGCTATGTTTCGAATTTTGATTTCAAA 57.525 25.926 0.00 1.66 43.36 2.69
3475 4274 9.474920 AAGCTATGTTTCGAATTTTGATTTCAA 57.525 25.926 0.00 0.00 0.00 2.69
3476 4275 8.914654 CAAGCTATGTTTCGAATTTTGATTTCA 58.085 29.630 0.00 0.00 0.00 2.69
3477 4276 9.128107 TCAAGCTATGTTTCGAATTTTGATTTC 57.872 29.630 0.00 0.00 0.00 2.17
3478 4277 9.132521 CTCAAGCTATGTTTCGAATTTTGATTT 57.867 29.630 0.00 0.00 0.00 2.17
3479 4278 8.514594 TCTCAAGCTATGTTTCGAATTTTGATT 58.485 29.630 0.00 0.00 0.00 2.57
3480 4279 8.044060 TCTCAAGCTATGTTTCGAATTTTGAT 57.956 30.769 0.00 0.00 0.00 2.57
3481 4280 7.433708 TCTCAAGCTATGTTTCGAATTTTGA 57.566 32.000 0.00 1.73 0.00 2.69
3482 4281 8.420189 GTTTCTCAAGCTATGTTTCGAATTTTG 58.580 33.333 0.00 0.00 0.00 2.44
3483 4282 8.134895 TGTTTCTCAAGCTATGTTTCGAATTTT 58.865 29.630 0.00 0.00 0.00 1.82
3484 4283 7.648142 TGTTTCTCAAGCTATGTTTCGAATTT 58.352 30.769 0.00 0.00 0.00 1.82
3485 4284 7.202016 TGTTTCTCAAGCTATGTTTCGAATT 57.798 32.000 0.00 0.00 0.00 2.17
3486 4285 6.801539 TGTTTCTCAAGCTATGTTTCGAAT 57.198 33.333 0.00 0.00 0.00 3.34
3487 4286 6.801539 ATGTTTCTCAAGCTATGTTTCGAA 57.198 33.333 0.00 0.00 0.00 3.71
3488 4287 7.899178 TTATGTTTCTCAAGCTATGTTTCGA 57.101 32.000 0.00 0.00 0.00 3.71
3489 4288 9.559958 AATTTATGTTTCTCAAGCTATGTTTCG 57.440 29.630 0.00 0.00 0.00 3.46
3498 4297 9.214953 CGAATCTGTAATTTATGTTTCTCAAGC 57.785 33.333 0.00 0.00 0.00 4.01
3501 4300 9.430623 TGTCGAATCTGTAATTTATGTTTCTCA 57.569 29.630 0.00 0.00 0.00 3.27
3502 4301 9.907576 CTGTCGAATCTGTAATTTATGTTTCTC 57.092 33.333 0.00 0.00 0.00 2.87
3503 4302 9.436957 ACTGTCGAATCTGTAATTTATGTTTCT 57.563 29.630 0.00 0.00 0.00 2.52
3514 4313 9.778993 GTGTACTATTTACTGTCGAATCTGTAA 57.221 33.333 0.00 0.00 32.70 2.41
3515 4314 8.949177 TGTGTACTATTTACTGTCGAATCTGTA 58.051 33.333 0.00 0.00 0.00 2.74
3516 4315 7.823665 TGTGTACTATTTACTGTCGAATCTGT 58.176 34.615 0.00 0.00 0.00 3.41
3517 4316 8.584600 GTTGTGTACTATTTACTGTCGAATCTG 58.415 37.037 0.00 0.00 0.00 2.90
3518 4317 8.301720 TGTTGTGTACTATTTACTGTCGAATCT 58.698 33.333 0.00 0.00 0.00 2.40
3519 4318 8.456904 TGTTGTGTACTATTTACTGTCGAATC 57.543 34.615 0.00 0.00 0.00 2.52
3520 4319 8.997621 ATGTTGTGTACTATTTACTGTCGAAT 57.002 30.769 0.00 0.00 0.00 3.34
3521 4320 9.911138 TTATGTTGTGTACTATTTACTGTCGAA 57.089 29.630 0.00 0.00 0.00 3.71
3522 4321 9.563898 CTTATGTTGTGTACTATTTACTGTCGA 57.436 33.333 0.00 0.00 0.00 4.20
3523 4322 9.350357 ACTTATGTTGTGTACTATTTACTGTCG 57.650 33.333 0.00 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.