Multiple sequence alignment - TraesCS7D01G269800

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BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G269800 chr7D 100.000 4883 0 0 2885 7767 254980430 254985312 0.000000e+00 9018.0
1 TraesCS7D01G269800 chr7D 100.000 2356 0 0 1 2356 254977546 254979901 0.000000e+00 4351.0
2 TraesCS7D01G269800 chr7D 83.099 142 20 4 3600 3739 171351986 171352125 8.180000e-25 126.0
3 TraesCS7D01G269800 chr7A 95.857 1593 46 11 5477 7062 274313811 274315390 0.000000e+00 2558.0
4 TraesCS7D01G269800 chr7A 91.342 924 69 10 4484 5402 35180137 35179220 0.000000e+00 1253.0
5 TraesCS7D01G269800 chr7A 87.540 618 37 20 803 1401 274311212 274311808 0.000000e+00 678.0
6 TraesCS7D01G269800 chr7A 88.323 471 39 10 1901 2355 652296719 652297189 1.140000e-152 551.0
7 TraesCS7D01G269800 chr7A 92.778 360 21 4 466 820 274310838 274311197 4.160000e-142 516.0
8 TraesCS7D01G269800 chr7A 87.853 354 30 8 1901 2241 105757011 105756658 3.380000e-108 403.0
9 TraesCS7D01G269800 chr7A 92.308 234 16 2 2885 3116 652297297 652297530 1.620000e-86 331.0
10 TraesCS7D01G269800 chr7A 88.722 266 25 4 3145 3410 529440836 529440576 3.500000e-83 320.0
11 TraesCS7D01G269800 chr7A 92.523 214 14 2 2905 3116 105756198 105755985 9.790000e-79 305.0
12 TraesCS7D01G269800 chr7A 88.770 187 20 1 1633 1818 529441757 529441571 2.180000e-55 228.0
13 TraesCS7D01G269800 chr7A 87.701 187 21 2 1633 1818 706306847 706307032 4.720000e-52 217.0
14 TraesCS7D01G269800 chr7A 92.053 151 12 0 146 296 274247382 274247532 6.100000e-51 213.0
15 TraesCS7D01G269800 chr7A 95.161 62 3 0 301 362 274310726 274310787 1.780000e-16 99.0
16 TraesCS7D01G269800 chr7A 94.444 36 2 0 5408 5443 130229576 130229541 1.000000e-03 56.5
17 TraesCS7D01G269800 chr7B 96.175 1438 54 1 5489 6926 232747315 232748751 0.000000e+00 2350.0
18 TraesCS7D01G269800 chr7B 91.350 948 47 13 466 1395 232736380 232737310 0.000000e+00 1264.0
19 TraesCS7D01G269800 chr7B 87.234 141 10 2 6923 7062 232755678 232755811 3.750000e-33 154.0
20 TraesCS7D01G269800 chr7B 94.286 70 4 0 293 362 232736230 232736299 2.960000e-19 108.0
21 TraesCS7D01G269800 chr5D 97.870 845 17 1 2896 3740 494707794 494708637 0.000000e+00 1459.0
22 TraesCS7D01G269800 chr5D 98.101 474 8 1 1819 2291 494706868 494707341 0.000000e+00 824.0
23 TraesCS7D01G269800 chr5D 97.119 486 11 1 1871 2356 556446401 556445919 0.000000e+00 817.0
24 TraesCS7D01G269800 chr5D 98.387 186 3 0 1633 1818 494706538 494706723 2.090000e-85 327.0
25 TraesCS7D01G269800 chr5D 96.791 187 6 0 1632 1818 556446675 556446489 5.850000e-81 313.0
26 TraesCS7D01G269800 chr5D 96.341 164 6 0 2885 3048 556445805 556445642 3.570000e-68 270.0
27 TraesCS7D01G269800 chr5D 89.333 150 16 0 5 154 77083527 77083676 1.030000e-43 189.0
28 TraesCS7D01G269800 chr5D 88.435 147 16 1 5 151 282384119 282384264 8.010000e-40 176.0
29 TraesCS7D01G269800 chr5D 91.837 49 2 1 390 438 262838801 262838755 5.030000e-07 67.6
30 TraesCS7D01G269800 chr5D 83.333 78 5 7 390 467 385963744 385963813 1.810000e-06 65.8
31 TraesCS7D01G269800 chr2A 95.210 856 40 1 2885 3739 19500102 19500957 0.000000e+00 1352.0
32 TraesCS7D01G269800 chr2A 90.370 893 71 14 4524 5407 493371280 493370394 0.000000e+00 1158.0
33 TraesCS7D01G269800 chr2A 96.310 542 16 2 1819 2356 19499447 19499988 0.000000e+00 887.0
34 TraesCS7D01G269800 chr2A 82.857 700 90 17 3068 3742 445364673 445365367 1.120000e-167 601.0
35 TraesCS7D01G269800 chr2A 87.315 473 40 14 1901 2355 735012196 735012666 2.480000e-144 523.0
36 TraesCS7D01G269800 chr2A 87.879 396 39 8 3018 3410 764238900 764239289 2.550000e-124 457.0
37 TraesCS7D01G269800 chr2A 91.928 223 14 3 2898 3116 735012781 735013003 7.570000e-80 309.0
38 TraesCS7D01G269800 chr2A 95.699 186 8 0 1633 1818 19499115 19499300 4.560000e-77 300.0
39 TraesCS7D01G269800 chr2A 85.792 183 22 4 7374 7555 75605057 75604878 2.860000e-44 191.0
40 TraesCS7D01G269800 chr1D 91.483 951 68 8 4476 5415 58117577 58116629 0.000000e+00 1295.0
41 TraesCS7D01G269800 chr1D 89.209 139 13 2 10 147 92326022 92325885 1.040000e-38 172.0
42 TraesCS7D01G269800 chr1D 85.496 131 17 2 22 151 232412760 232412631 1.360000e-27 135.0
43 TraesCS7D01G269800 chr1D 88.235 68 4 3 402 467 24124625 24124690 2.320000e-10 78.7
44 TraesCS7D01G269800 chr1D 85.294 68 7 2 402 469 474288928 474288992 5.030000e-07 67.6
45 TraesCS7D01G269800 chr1D 92.308 39 3 0 398 436 174151274 174151236 1.000000e-03 56.5
46 TraesCS7D01G269800 chr4D 95.822 766 22 7 4652 5413 471241865 471241106 0.000000e+00 1229.0
47 TraesCS7D01G269800 chr4D 93.344 631 33 2 7137 7758 12500457 12499827 0.000000e+00 924.0
48 TraesCS7D01G269800 chr4D 88.514 148 16 1 4 151 79756063 79756209 2.230000e-40 178.0
49 TraesCS7D01G269800 chr4D 89.437 142 14 1 10 151 394863990 394864130 2.230000e-40 178.0
50 TraesCS7D01G269800 chr4D 87.838 148 17 1 4 151 343004000 343004146 1.040000e-38 172.0
51 TraesCS7D01G269800 chr4D 86.486 148 19 1 4 151 380537445 380537591 2.240000e-35 161.0
52 TraesCS7D01G269800 chr4D 85.612 139 19 1 4 142 313522154 313522291 2.260000e-30 145.0
53 TraesCS7D01G269800 chr4D 89.855 69 5 1 402 468 426785002 426785070 3.860000e-13 87.9
54 TraesCS7D01G269800 chr4D 89.130 46 3 2 442 486 275755094 275755138 1.000000e-03 56.5
55 TraesCS7D01G269800 chr4D 96.970 33 0 1 437 468 507728079 507728111 4.000000e-03 54.7
56 TraesCS7D01G269800 chr4D 96.875 32 0 1 437 467 12713999 12714030 1.400000e-02 52.8
57 TraesCS7D01G269800 chr2D 95.606 751 29 4 4652 5401 538595984 538595237 0.000000e+00 1201.0
58 TraesCS7D01G269800 chr2D 88.131 396 40 6 3019 3411 476918621 476918230 1.530000e-126 464.0
59 TraesCS7D01G269800 chr2D 86.911 191 24 1 1629 1818 476919468 476919278 6.100000e-51 213.0
60 TraesCS7D01G269800 chr2D 87.931 174 21 0 3568 3741 476919294 476919467 1.020000e-48 206.0
61 TraesCS7D01G269800 chr6B 95.358 754 28 4 4652 5401 376296869 376297619 0.000000e+00 1192.0
62 TraesCS7D01G269800 chr6B 88.889 72 2 5 2889 2955 4480852 4480922 4.990000e-12 84.2
63 TraesCS7D01G269800 chr5A 90.869 898 62 15 4524 5409 683135203 683134314 0.000000e+00 1186.0
64 TraesCS7D01G269800 chr5A 84.192 873 105 20 2893 3738 451141117 451141983 0.000000e+00 817.0
65 TraesCS7D01G269800 chr5A 81.226 767 101 27 2885 3640 380171344 380170610 5.230000e-161 579.0
66 TraesCS7D01G269800 chr5A 80.362 387 35 18 1820 2173 451140446 451140824 1.000000e-63 255.0
67 TraesCS7D01G269800 chr5A 88.265 196 21 2 1625 1818 452921517 452921712 4.690000e-57 233.0
68 TraesCS7D01G269800 chr5A 88.235 187 21 1 1633 1818 633637800 633637614 1.010000e-53 222.0
69 TraesCS7D01G269800 chr5A 89.189 148 15 1 4 151 626705083 626704937 4.790000e-42 183.0
70 TraesCS7D01G269800 chr1A 90.045 894 66 14 4524 5402 508491875 508490990 0.000000e+00 1136.0
71 TraesCS7D01G269800 chr1A 87.179 273 29 5 3145 3416 366545810 366545543 9.790000e-79 305.0
72 TraesCS7D01G269800 chr1A 87.166 187 23 1 1633 1818 366546728 366546542 2.200000e-50 211.0
73 TraesCS7D01G269800 chr1A 84.106 151 23 1 1 151 379147586 379147735 2.260000e-30 145.0
74 TraesCS7D01G269800 chr1A 83.784 148 23 1 4 151 315486399 315486545 1.050000e-28 139.0
75 TraesCS7D01G269800 chr1A 89.706 68 4 2 402 467 516154078 516154144 4.990000e-12 84.2
76 TraesCS7D01G269800 chr1A 91.525 59 3 2 409 467 52628064 52628120 6.460000e-11 80.5
77 TraesCS7D01G269800 chr1A 86.567 67 7 2 402 467 17783743 17783678 1.080000e-08 73.1
78 TraesCS7D01G269800 chr1A 86.765 68 3 2 402 469 540148840 540148901 3.890000e-08 71.3
79 TraesCS7D01G269800 chr1A 84.932 73 7 3 398 467 566654434 566654363 3.890000e-08 71.3
80 TraesCS7D01G269800 chr1B 88.223 934 85 21 4484 5402 681250325 681251248 0.000000e+00 1092.0
81 TraesCS7D01G269800 chr1B 91.922 619 38 2 7073 7686 437556795 437557406 0.000000e+00 856.0
82 TraesCS7D01G269800 chr1B 90.880 625 47 3 7062 7686 111705023 111705637 0.000000e+00 830.0
83 TraesCS7D01G269800 chr1B 90.526 95 9 0 7670 7764 437557420 437557514 8.180000e-25 126.0
84 TraesCS7D01G269800 chr1B 93.243 74 5 0 7691 7764 111705670 111705743 8.240000e-20 110.0
85 TraesCS7D01G269800 chr1B 91.176 68 2 1 2892 2955 659727006 659726939 1.070000e-13 89.8
86 TraesCS7D01G269800 chr1B 88.889 63 5 1 401 463 223898908 223898968 8.360000e-10 76.8
87 TraesCS7D01G269800 chr6A 92.587 715 45 4 7055 7764 421777283 421777994 0.000000e+00 1020.0
88 TraesCS7D01G269800 chr6A 82.546 699 91 16 3066 3738 564116863 564117556 3.120000e-163 586.0
89 TraesCS7D01G269800 chr6A 96.296 189 7 0 4476 4664 371705307 371705119 2.100000e-80 311.0
90 TraesCS7D01G269800 chr6A 88.015 267 26 5 3145 3410 491002610 491002349 2.100000e-80 311.0
91 TraesCS7D01G269800 chr6A 88.716 257 24 4 3145 3401 63309156 63309407 7.570000e-80 309.0
92 TraesCS7D01G269800 chr6A 87.970 266 27 4 3145 3410 521653822 521654082 7.570000e-80 309.0
93 TraesCS7D01G269800 chr6A 85.385 260 32 4 3489 3744 100937872 100937615 1.660000e-66 265.0
94 TraesCS7D01G269800 chr6A 79.587 387 38 18 1820 2173 564115942 564116320 1.010000e-58 239.0
95 TraesCS7D01G269800 chr6A 88.298 188 21 1 1632 1818 63308234 63308421 2.820000e-54 224.0
96 TraesCS7D01G269800 chr6A 87.166 187 23 1 1633 1818 491003529 491003343 2.200000e-50 211.0
97 TraesCS7D01G269800 chr6A 86.702 188 23 2 1633 1818 100939121 100938934 2.840000e-49 207.0
98 TraesCS7D01G269800 chr6A 86.631 187 24 1 1633 1818 521652903 521653089 1.020000e-48 206.0
99 TraesCS7D01G269800 chr6A 89.362 141 14 1 11 151 611955282 611955143 8.010000e-40 176.0
100 TraesCS7D01G269800 chr6A 86.567 67 8 1 401 467 135769320 135769385 1.080000e-08 73.1
101 TraesCS7D01G269800 chr2B 88.388 732 59 9 7059 7764 67216487 67215756 0.000000e+00 857.0
102 TraesCS7D01G269800 chr2B 83.133 747 90 20 3024 3741 779824837 779824098 0.000000e+00 649.0
103 TraesCS7D01G269800 chr2B 80.241 582 61 23 1820 2355 779825981 779825408 9.450000e-104 388.0
104 TraesCS7D01G269800 chr2B 88.235 68 6 1 402 467 440815940 440816007 6.460000e-11 80.5
105 TraesCS7D01G269800 chr6D 83.135 842 108 22 2926 3739 458565201 458566036 0.000000e+00 737.0
106 TraesCS7D01G269800 chr6D 87.879 396 41 6 3019 3411 367000067 366999676 7.100000e-125 459.0
107 TraesCS7D01G269800 chr6D 87.657 397 40 7 3019 3411 130274300 130273909 3.300000e-123 453.0
108 TraesCS7D01G269800 chr6D 86.925 413 38 10 1956 2355 458564692 458565101 4.270000e-122 449.0
109 TraesCS7D01G269800 chr6D 92.342 222 16 1 7062 7283 459106767 459106987 1.630000e-81 315.0
110 TraesCS7D01G269800 chr6D 81.429 350 57 8 4476 4821 366976047 366975702 5.930000e-71 279.0
111 TraesCS7D01G269800 chr6D 81.029 311 36 11 3451 3747 455572650 455572951 7.840000e-55 226.0
112 TraesCS7D01G269800 chr6D 89.655 174 18 0 3568 3741 367000740 367000913 1.010000e-53 222.0
113 TraesCS7D01G269800 chr6D 87.435 191 23 1 1629 1818 130275144 130274954 1.310000e-52 219.0
114 TraesCS7D01G269800 chr6D 87.435 191 23 1 1629 1818 367000914 367000724 1.310000e-52 219.0
115 TraesCS7D01G269800 chr6D 89.571 163 16 1 1636 1797 366999355 366999517 1.020000e-48 206.0
116 TraesCS7D01G269800 chr6D 88.889 135 15 0 4 138 14784157 14784291 4.820000e-37 167.0
117 TraesCS7D01G269800 chr6D 88.028 142 16 1 10 151 63736253 63736113 4.820000e-37 167.0
118 TraesCS7D01G269800 chr6D 95.122 41 2 0 398 438 81756097 81756137 1.810000e-06 65.8
119 TraesCS7D01G269800 chr6D 97.368 38 1 0 401 438 472719866 472719903 1.810000e-06 65.8
120 TraesCS7D01G269800 chr6D 93.182 44 2 1 395 438 259459213 259459171 6.510000e-06 63.9
121 TraesCS7D01G269800 chr6D 89.796 49 4 1 391 438 2103738 2103690 2.340000e-05 62.1
122 TraesCS7D01G269800 chr6D 91.111 45 4 0 394 438 54235848 54235892 2.340000e-05 62.1
123 TraesCS7D01G269800 chr6D 100.000 29 0 0 442 470 83173527 83173499 4.000000e-03 54.7
124 TraesCS7D01G269800 chr6D 100.000 28 0 0 442 469 25766542 25766569 1.400000e-02 52.8
125 TraesCS7D01G269800 chr6D 100.000 28 0 0 441 468 389648462 389648435 1.400000e-02 52.8
126 TraesCS7D01G269800 chr4A 83.073 703 87 17 3063 3739 632205690 632206386 1.850000e-170 610.0
127 TraesCS7D01G269800 chr4A 96.296 189 6 1 4476 4664 396323657 396323470 7.570000e-80 309.0
128 TraesCS7D01G269800 chr4A 96.296 189 6 1 4476 4664 396404467 396404280 7.570000e-80 309.0
129 TraesCS7D01G269800 chr4A 79.459 370 36 16 1820 2157 632202871 632203232 7.840000e-55 226.0
130 TraesCS7D01G269800 chr4A 79.891 184 15 7 2173 2355 632205018 632205180 1.770000e-21 115.0
131 TraesCS7D01G269800 chr4A 91.176 68 4 1 401 468 432571379 432571314 2.980000e-14 91.6
132 TraesCS7D01G269800 chr4A 87.324 71 5 2 402 468 714175814 714175884 2.320000e-10 78.7
133 TraesCS7D01G269800 chr3A 88.110 471 39 11 1901 2355 507768342 507767873 1.910000e-150 544.0
134 TraesCS7D01G269800 chr3A 91.915 235 16 3 2885 3116 507767214 507766980 7.520000e-85 326.0
135 TraesCS7D01G269800 chr3A 97.312 186 4 1 4476 4661 505295279 505295463 1.630000e-81 315.0
136 TraesCS7D01G269800 chr3A 85.375 253 27 7 3489 3738 164930383 164930138 3.600000e-63 254.0
137 TraesCS7D01G269800 chr3A 88.770 187 20 1 1633 1818 164931622 164931436 2.180000e-55 228.0
138 TraesCS7D01G269800 chr3A 89.796 147 11 3 2213 2355 507767480 507767334 1.330000e-42 185.0
139 TraesCS7D01G269800 chr3A 88.591 149 13 4 4 151 574005913 574006058 2.230000e-40 178.0
140 TraesCS7D01G269800 chr3A 86.047 86 9 2 134 218 529144113 529144196 1.070000e-13 89.8
141 TraesCS7D01G269800 chr3D 95.312 192 9 0 4470 4661 484285179 484285370 9.790000e-79 305.0
142 TraesCS7D01G269800 chr3D 89.262 149 15 1 3 151 292357221 292357368 1.330000e-42 185.0
143 TraesCS7D01G269800 chr3D 87.417 151 18 1 1 151 278779413 278779264 1.040000e-38 172.0
144 TraesCS7D01G269800 chr3D 88.158 76 5 2 397 468 56348159 56348084 3.860000e-13 87.9
145 TraesCS7D01G269800 chr3D 84.043 94 10 4 133 225 422034327 422034238 1.390000e-12 86.1
146 TraesCS7D01G269800 chr3D 87.671 73 5 2 401 469 56348084 56348156 1.800000e-11 82.4
147 TraesCS7D01G269800 chr3D 87.500 72 3 3 402 467 564907468 564907397 2.320000e-10 78.7
148 TraesCS7D01G269800 chr3D 86.957 69 6 2 146 213 610890061 610889995 3.010000e-09 75.0
149 TraesCS7D01G269800 chr5B 88.591 149 14 3 3 151 620728795 620728940 2.230000e-40 178.0
150 TraesCS7D01G269800 chr5B 93.220 59 3 1 409 467 12584358 12584415 1.390000e-12 86.1
151 TraesCS7D01G269800 chr4B 87.838 148 17 1 4 151 176017411 176017265 1.040000e-38 172.0
152 TraesCS7D01G269800 chr4B 87.500 72 3 2 402 467 666410092 666410163 2.320000e-10 78.7
153 TraesCS7D01G269800 chrUn 83.108 148 14 2 4 151 39760214 39760350 2.940000e-24 124.0
154 TraesCS7D01G269800 chrUn 91.176 68 2 1 2892 2955 136330319 136330252 1.070000e-13 89.8
155 TraesCS7D01G269800 chrUn 89.706 68 4 2 402 467 188193862 188193928 4.990000e-12 84.2
156 TraesCS7D01G269800 chrUn 93.023 43 3 0 396 438 177183765 177183723 6.510000e-06 63.9
157 TraesCS7D01G269800 chrUn 93.023 43 3 0 396 438 401481421 401481463 6.510000e-06 63.9
158 TraesCS7D01G269800 chrUn 97.222 36 1 0 401 436 31701832 31701867 2.340000e-05 62.1
159 TraesCS7D01G269800 chrUn 91.304 46 3 1 397 442 35713251 35713295 2.340000e-05 62.1
160 TraesCS7D01G269800 chrUn 92.857 42 3 0 397 438 88217856 88217897 2.340000e-05 62.1
161 TraesCS7D01G269800 chrUn 94.872 39 2 0 398 436 122302190 122302152 2.340000e-05 62.1
162 TraesCS7D01G269800 chrUn 94.872 39 2 0 400 438 327154468 327154506 2.340000e-05 62.1
163 TraesCS7D01G269800 chrUn 94.737 38 2 0 401 438 6054395 6054432 8.420000e-05 60.2
164 TraesCS7D01G269800 chrUn 94.737 38 2 0 401 438 15864345 15864308 8.420000e-05 60.2
165 TraesCS7D01G269800 chrUn 92.683 41 3 0 398 438 43582919 43582959 8.420000e-05 60.2
166 TraesCS7D01G269800 chrUn 92.683 41 3 0 398 438 49991388 49991428 8.420000e-05 60.2
167 TraesCS7D01G269800 chrUn 94.737 38 2 0 402 439 74189460 74189423 8.420000e-05 60.2
168 TraesCS7D01G269800 chrUn 91.111 45 3 1 395 438 124821464 124821508 8.420000e-05 60.2
169 TraesCS7D01G269800 chrUn 97.143 35 0 1 437 470 81901878 81901912 3.030000e-04 58.4
170 TraesCS7D01G269800 chr3B 87.097 62 8 0 7076 7137 17704003 17704064 3.890000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G269800 chr7D 254977546 254985312 7766 False 6684.500000 9018 100.000000 1 7767 2 chr7D.!!$F2 7766
1 TraesCS7D01G269800 chr7A 35179220 35180137 917 True 1253.000000 1253 91.342000 4484 5402 1 chr7A.!!$R1 918
2 TraesCS7D01G269800 chr7A 274310726 274315390 4664 False 962.750000 2558 92.834000 301 7062 4 chr7A.!!$F3 6761
3 TraesCS7D01G269800 chr7A 652296719 652297530 811 False 441.000000 551 90.315500 1901 3116 2 chr7A.!!$F4 1215
4 TraesCS7D01G269800 chr7A 105755985 105757011 1026 True 354.000000 403 90.188000 1901 3116 2 chr7A.!!$R3 1215
5 TraesCS7D01G269800 chr7A 529440576 529441757 1181 True 274.000000 320 88.746000 1633 3410 2 chr7A.!!$R4 1777
6 TraesCS7D01G269800 chr7B 232747315 232748751 1436 False 2350.000000 2350 96.175000 5489 6926 1 chr7B.!!$F1 1437
7 TraesCS7D01G269800 chr7B 232736230 232737310 1080 False 686.000000 1264 92.818000 293 1395 2 chr7B.!!$F3 1102
8 TraesCS7D01G269800 chr5D 494706538 494708637 2099 False 870.000000 1459 98.119333 1633 3740 3 chr5D.!!$F4 2107
9 TraesCS7D01G269800 chr5D 556445642 556446675 1033 True 466.666667 817 96.750333 1632 3048 3 chr5D.!!$R2 1416
10 TraesCS7D01G269800 chr2A 493370394 493371280 886 True 1158.000000 1158 90.370000 4524 5407 1 chr2A.!!$R2 883
11 TraesCS7D01G269800 chr2A 19499115 19500957 1842 False 846.333333 1352 95.739667 1633 3739 3 chr2A.!!$F3 2106
12 TraesCS7D01G269800 chr2A 445364673 445365367 694 False 601.000000 601 82.857000 3068 3742 1 chr2A.!!$F1 674
13 TraesCS7D01G269800 chr2A 735012196 735013003 807 False 416.000000 523 89.621500 1901 3116 2 chr2A.!!$F4 1215
14 TraesCS7D01G269800 chr1D 58116629 58117577 948 True 1295.000000 1295 91.483000 4476 5415 1 chr1D.!!$R1 939
15 TraesCS7D01G269800 chr4D 471241106 471241865 759 True 1229.000000 1229 95.822000 4652 5413 1 chr4D.!!$R2 761
16 TraesCS7D01G269800 chr4D 12499827 12500457 630 True 924.000000 924 93.344000 7137 7758 1 chr4D.!!$R1 621
17 TraesCS7D01G269800 chr2D 538595237 538595984 747 True 1201.000000 1201 95.606000 4652 5401 1 chr2D.!!$R1 749
18 TraesCS7D01G269800 chr2D 476918230 476919468 1238 True 338.500000 464 87.521000 1629 3411 2 chr2D.!!$R2 1782
19 TraesCS7D01G269800 chr6B 376296869 376297619 750 False 1192.000000 1192 95.358000 4652 5401 1 chr6B.!!$F2 749
20 TraesCS7D01G269800 chr5A 683134314 683135203 889 True 1186.000000 1186 90.869000 4524 5409 1 chr5A.!!$R4 885
21 TraesCS7D01G269800 chr5A 380170610 380171344 734 True 579.000000 579 81.226000 2885 3640 1 chr5A.!!$R1 755
22 TraesCS7D01G269800 chr5A 451140446 451141983 1537 False 536.000000 817 82.277000 1820 3738 2 chr5A.!!$F2 1918
23 TraesCS7D01G269800 chr1A 508490990 508491875 885 True 1136.000000 1136 90.045000 4524 5402 1 chr1A.!!$R2 878
24 TraesCS7D01G269800 chr1A 366545543 366546728 1185 True 258.000000 305 87.172500 1633 3416 2 chr1A.!!$R4 1783
25 TraesCS7D01G269800 chr1B 681250325 681251248 923 False 1092.000000 1092 88.223000 4484 5402 1 chr1B.!!$F2 918
26 TraesCS7D01G269800 chr1B 437556795 437557514 719 False 491.000000 856 91.224000 7073 7764 2 chr1B.!!$F4 691
27 TraesCS7D01G269800 chr1B 111705023 111705743 720 False 470.000000 830 92.061500 7062 7764 2 chr1B.!!$F3 702
28 TraesCS7D01G269800 chr6A 421777283 421777994 711 False 1020.000000 1020 92.587000 7055 7764 1 chr6A.!!$F2 709
29 TraesCS7D01G269800 chr6A 564115942 564117556 1614 False 412.500000 586 81.066500 1820 3738 2 chr6A.!!$F5 1918
30 TraesCS7D01G269800 chr6A 63308234 63309407 1173 False 266.500000 309 88.507000 1632 3401 2 chr6A.!!$F3 1769
31 TraesCS7D01G269800 chr6A 491002349 491003529 1180 True 261.000000 311 87.590500 1633 3410 2 chr6A.!!$R4 1777
32 TraesCS7D01G269800 chr6A 521652903 521654082 1179 False 257.500000 309 87.300500 1633 3410 2 chr6A.!!$F4 1777
33 TraesCS7D01G269800 chr6A 100937615 100939121 1506 True 236.000000 265 86.043500 1633 3744 2 chr6A.!!$R3 2111
34 TraesCS7D01G269800 chr2B 67215756 67216487 731 True 857.000000 857 88.388000 7059 7764 1 chr2B.!!$R1 705
35 TraesCS7D01G269800 chr2B 779824098 779825981 1883 True 518.500000 649 81.687000 1820 3741 2 chr2B.!!$R2 1921
36 TraesCS7D01G269800 chr6D 458564692 458566036 1344 False 593.000000 737 85.030000 1956 3739 2 chr6D.!!$F9 1783
37 TraesCS7D01G269800 chr6D 366999676 367000914 1238 True 339.000000 459 87.657000 1629 3411 2 chr6D.!!$R8 1782
38 TraesCS7D01G269800 chr6D 130273909 130275144 1235 True 336.000000 453 87.546000 1629 3411 2 chr6D.!!$R7 1782
39 TraesCS7D01G269800 chr6D 366999355 367000913 1558 False 214.000000 222 89.613000 1636 3741 2 chr6D.!!$F8 2105
40 TraesCS7D01G269800 chr4A 632202871 632206386 3515 False 317.000000 610 80.807667 1820 3739 3 chr4A.!!$F2 1919
41 TraesCS7D01G269800 chr3A 507766980 507768342 1362 True 351.666667 544 89.940333 1901 3116 3 chr3A.!!$R2 1215
42 TraesCS7D01G269800 chr3A 164930138 164931622 1484 True 241.000000 254 87.072500 1633 3738 2 chr3A.!!$R1 2105

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
555 573 0.105593 CGCTGCTGTCCACTATCCAT 59.894 55.0 0.00 0.00 0.00 3.41 F
587 605 0.855349 CGCTCTAATGATCACACGCC 59.145 55.0 0.00 0.00 0.00 5.68 F
697 719 0.948623 CTGATTGCGGGAACACGACA 60.949 55.0 0.00 0.00 35.47 4.35 F
1301 1378 0.976641 TCCAGGTAGCACTGACAAGG 59.023 55.0 4.85 0.00 40.97 3.61 F
1599 1676 0.179233 GAACGTTCGCCGGCTAAAAG 60.179 55.0 26.68 21.48 42.24 2.27 F
3706 7138 0.597568 ACCGAAATGACCGTCACGTA 59.402 50.0 2.57 0.00 0.00 3.57 F
4195 7637 0.694771 ATCCAGCCTGCAAGTCTTCA 59.305 50.0 0.00 0.00 0.00 3.02 F
5445 10267 0.342313 AGGGAACGGAGGGATTAGGT 59.658 55.0 0.00 0.00 0.00 3.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1445 1522 0.109458 TGACCTCGATCAAACGGTCG 60.109 55.000 12.90 0.00 46.88 4.79 R
1580 1657 0.179233 CTTTTAGCCGGCGAACGTTC 60.179 55.000 22.38 18.47 42.24 3.95 R
1581 1658 1.571215 CCTTTTAGCCGGCGAACGTT 61.571 55.000 22.38 0.00 42.24 3.99 R
3690 7122 3.054878 ACTTGTACGTGACGGTCATTTC 58.945 45.455 14.78 0.47 0.00 2.17 R
3799 7231 0.038310 CCCAGAAAGGAAGGTCACCC 59.962 60.000 0.00 0.00 41.22 4.61 R
5426 10248 0.342313 ACCTAATCCCTCCGTTCCCT 59.658 55.000 0.00 0.00 0.00 4.20 R
5971 10854 1.514873 GTAACGTACCTGGTCGGCG 60.515 63.158 18.25 16.21 35.61 6.46 R
6767 11650 0.528470 AACAGTAGCAGTCTCGAGGC 59.472 55.000 9.58 9.58 0.00 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 3.096092 AGTGAGACTAGAAGCAAGGAGG 58.904 50.000 0.00 0.00 0.00 4.30
24 25 1.827969 TGAGACTAGAAGCAAGGAGGC 59.172 52.381 0.00 0.00 0.00 4.70
25 26 1.138069 GAGACTAGAAGCAAGGAGGCC 59.862 57.143 0.00 0.00 0.00 5.19
26 27 0.179097 GACTAGAAGCAAGGAGGCCG 60.179 60.000 0.00 0.00 0.00 6.13
27 28 0.905337 ACTAGAAGCAAGGAGGCCGT 60.905 55.000 0.00 0.00 0.00 5.68
28 29 0.460987 CTAGAAGCAAGGAGGCCGTG 60.461 60.000 0.00 0.00 36.14 4.94
29 30 0.902984 TAGAAGCAAGGAGGCCGTGA 60.903 55.000 0.00 0.00 35.05 4.35
30 31 1.302511 GAAGCAAGGAGGCCGTGAA 60.303 57.895 0.00 0.00 35.05 3.18
31 32 1.301677 GAAGCAAGGAGGCCGTGAAG 61.302 60.000 0.00 0.00 35.05 3.02
32 33 2.032681 GCAAGGAGGCCGTGAAGT 59.967 61.111 0.00 0.00 35.05 3.01
33 34 2.328099 GCAAGGAGGCCGTGAAGTG 61.328 63.158 0.00 0.00 35.05 3.16
34 35 1.071471 CAAGGAGGCCGTGAAGTGT 59.929 57.895 0.00 0.00 35.05 3.55
35 36 0.535102 CAAGGAGGCCGTGAAGTGTT 60.535 55.000 0.00 0.00 35.05 3.32
36 37 1.053424 AAGGAGGCCGTGAAGTGTTA 58.947 50.000 0.00 0.00 0.00 2.41
37 38 1.276622 AGGAGGCCGTGAAGTGTTAT 58.723 50.000 0.00 0.00 0.00 1.89
38 39 2.463752 AGGAGGCCGTGAAGTGTTATA 58.536 47.619 0.00 0.00 0.00 0.98
39 40 2.167900 AGGAGGCCGTGAAGTGTTATAC 59.832 50.000 0.00 0.00 0.00 1.47
40 41 2.547826 GAGGCCGTGAAGTGTTATACC 58.452 52.381 0.00 0.00 0.00 2.73
41 42 1.134907 AGGCCGTGAAGTGTTATACCG 60.135 52.381 0.00 0.00 0.00 4.02
42 43 1.135024 GGCCGTGAAGTGTTATACCGA 60.135 52.381 0.00 0.00 0.00 4.69
43 44 2.609350 GCCGTGAAGTGTTATACCGAA 58.391 47.619 0.00 0.00 0.00 4.30
44 45 3.192466 GCCGTGAAGTGTTATACCGAAT 58.808 45.455 0.00 0.00 0.00 3.34
45 46 4.362279 GCCGTGAAGTGTTATACCGAATA 58.638 43.478 0.00 0.00 0.00 1.75
46 47 4.207841 GCCGTGAAGTGTTATACCGAATAC 59.792 45.833 0.00 0.00 0.00 1.89
47 48 4.741676 CCGTGAAGTGTTATACCGAATACC 59.258 45.833 0.00 0.00 0.00 2.73
48 49 4.438797 CGTGAAGTGTTATACCGAATACCG 59.561 45.833 0.00 0.00 38.18 4.02
63 64 6.211664 CGAATACCGGTGACAATAAGATTC 57.788 41.667 19.93 13.62 33.91 2.52
64 65 5.751509 CGAATACCGGTGACAATAAGATTCA 59.248 40.000 19.93 0.00 33.91 2.57
65 66 6.074302 CGAATACCGGTGACAATAAGATTCAG 60.074 42.308 19.93 7.67 33.91 3.02
66 67 4.553330 ACCGGTGACAATAAGATTCAGT 57.447 40.909 6.12 0.00 0.00 3.41
67 68 5.670792 ACCGGTGACAATAAGATTCAGTA 57.329 39.130 6.12 0.00 0.00 2.74
68 69 5.661458 ACCGGTGACAATAAGATTCAGTAG 58.339 41.667 6.12 0.00 0.00 2.57
69 70 5.050490 CCGGTGACAATAAGATTCAGTAGG 58.950 45.833 0.00 0.00 0.00 3.18
70 71 5.050490 CGGTGACAATAAGATTCAGTAGGG 58.950 45.833 0.00 0.00 0.00 3.53
71 72 5.395324 CGGTGACAATAAGATTCAGTAGGGT 60.395 44.000 0.00 0.00 0.00 4.34
72 73 6.183360 CGGTGACAATAAGATTCAGTAGGGTA 60.183 42.308 0.00 0.00 0.00 3.69
73 74 7.562135 GGTGACAATAAGATTCAGTAGGGTAA 58.438 38.462 0.00 0.00 0.00 2.85
74 75 7.494952 GGTGACAATAAGATTCAGTAGGGTAAC 59.505 40.741 0.00 0.00 0.00 2.50
75 76 8.038944 GTGACAATAAGATTCAGTAGGGTAACA 58.961 37.037 0.00 0.00 39.74 2.41
76 77 8.768397 TGACAATAAGATTCAGTAGGGTAACAT 58.232 33.333 0.00 0.00 39.74 2.71
77 78 8.964476 ACAATAAGATTCAGTAGGGTAACATG 57.036 34.615 0.00 0.00 39.74 3.21
78 79 7.993183 ACAATAAGATTCAGTAGGGTAACATGG 59.007 37.037 0.00 0.00 39.74 3.66
79 80 7.931015 ATAAGATTCAGTAGGGTAACATGGA 57.069 36.000 0.00 0.00 39.74 3.41
80 81 6.831664 AAGATTCAGTAGGGTAACATGGAT 57.168 37.500 0.00 0.00 39.74 3.41
81 82 6.426646 AGATTCAGTAGGGTAACATGGATC 57.573 41.667 0.00 0.00 39.74 3.36
82 83 5.905331 AGATTCAGTAGGGTAACATGGATCA 59.095 40.000 0.00 0.00 39.74 2.92
83 84 6.560304 AGATTCAGTAGGGTAACATGGATCAT 59.440 38.462 0.00 0.00 39.74 2.45
84 85 7.734865 AGATTCAGTAGGGTAACATGGATCATA 59.265 37.037 0.00 0.00 39.74 2.15
85 86 7.872061 TTCAGTAGGGTAACATGGATCATAT 57.128 36.000 0.00 0.00 39.74 1.78
86 87 7.482169 TCAGTAGGGTAACATGGATCATATC 57.518 40.000 0.00 0.00 39.74 1.63
87 88 6.440647 TCAGTAGGGTAACATGGATCATATCC 59.559 42.308 0.00 0.00 45.09 2.59
88 89 6.441924 CAGTAGGGTAACATGGATCATATCCT 59.558 42.308 7.43 0.15 45.10 3.24
89 90 7.025620 AGTAGGGTAACATGGATCATATCCTT 58.974 38.462 7.43 0.00 45.10 3.36
108 109 6.884472 TCCTTGAGGATAAATGAGGTGTAA 57.116 37.500 0.00 0.00 39.78 2.41
109 110 7.451731 TCCTTGAGGATAAATGAGGTGTAAT 57.548 36.000 0.00 0.00 39.78 1.89
110 111 7.509546 TCCTTGAGGATAAATGAGGTGTAATC 58.490 38.462 0.00 0.00 39.78 1.75
111 112 7.127186 TCCTTGAGGATAAATGAGGTGTAATCA 59.873 37.037 0.00 0.00 39.78 2.57
112 113 7.941238 CCTTGAGGATAAATGAGGTGTAATCAT 59.059 37.037 0.00 0.00 36.78 2.45
113 114 8.908786 TTGAGGATAAATGAGGTGTAATCATC 57.091 34.615 0.00 0.00 36.38 2.92
114 115 8.033178 TGAGGATAAATGAGGTGTAATCATCA 57.967 34.615 0.00 0.00 36.38 3.07
115 116 8.493607 TGAGGATAAATGAGGTGTAATCATCAA 58.506 33.333 0.00 0.00 36.38 2.57
116 117 9.342308 GAGGATAAATGAGGTGTAATCATCAAA 57.658 33.333 0.00 0.00 36.38 2.69
117 118 9.125026 AGGATAAATGAGGTGTAATCATCAAAC 57.875 33.333 0.00 0.00 36.38 2.93
118 119 8.070171 GGATAAATGAGGTGTAATCATCAAACG 58.930 37.037 0.00 0.00 36.38 3.60
119 120 4.882671 ATGAGGTGTAATCATCAAACGC 57.117 40.909 0.00 0.00 31.76 4.84
120 121 3.006940 TGAGGTGTAATCATCAAACGCC 58.993 45.455 0.00 0.00 42.81 5.68
121 122 2.006888 AGGTGTAATCATCAAACGCCG 58.993 47.619 0.00 0.00 46.17 6.46
122 123 2.004017 GGTGTAATCATCAAACGCCGA 58.996 47.619 0.00 0.00 34.38 5.54
123 124 2.417239 GGTGTAATCATCAAACGCCGAA 59.583 45.455 0.00 0.00 34.38 4.30
124 125 3.120130 GGTGTAATCATCAAACGCCGAAA 60.120 43.478 0.00 0.00 34.38 3.46
125 126 4.088648 GTGTAATCATCAAACGCCGAAAG 58.911 43.478 0.00 0.00 0.00 2.62
126 127 2.262572 AATCATCAAACGCCGAAAGC 57.737 45.000 0.00 0.00 38.52 3.51
127 128 1.453155 ATCATCAAACGCCGAAAGCT 58.547 45.000 0.00 0.00 40.39 3.74
128 129 0.796312 TCATCAAACGCCGAAAGCTC 59.204 50.000 0.00 0.00 40.39 4.09
129 130 0.798776 CATCAAACGCCGAAAGCTCT 59.201 50.000 0.00 0.00 40.39 4.09
130 131 1.197721 CATCAAACGCCGAAAGCTCTT 59.802 47.619 0.00 0.00 40.39 2.85
131 132 0.586319 TCAAACGCCGAAAGCTCTTG 59.414 50.000 0.00 0.00 40.39 3.02
132 133 0.307760 CAAACGCCGAAAGCTCTTGT 59.692 50.000 0.00 0.00 40.39 3.16
133 134 1.529438 CAAACGCCGAAAGCTCTTGTA 59.471 47.619 0.00 0.00 40.39 2.41
134 135 2.094762 AACGCCGAAAGCTCTTGTAT 57.905 45.000 0.00 0.00 40.39 2.29
135 136 1.359848 ACGCCGAAAGCTCTTGTATG 58.640 50.000 0.00 0.00 40.39 2.39
136 137 1.067142 ACGCCGAAAGCTCTTGTATGA 60.067 47.619 0.00 0.00 40.39 2.15
137 138 2.205074 CGCCGAAAGCTCTTGTATGAT 58.795 47.619 0.00 0.00 40.39 2.45
138 139 2.609459 CGCCGAAAGCTCTTGTATGATT 59.391 45.455 0.00 0.00 40.39 2.57
139 140 3.063997 CGCCGAAAGCTCTTGTATGATTT 59.936 43.478 0.00 0.00 40.39 2.17
140 141 4.592179 GCCGAAAGCTCTTGTATGATTTC 58.408 43.478 0.00 0.00 38.99 2.17
141 142 4.094887 GCCGAAAGCTCTTGTATGATTTCA 59.905 41.667 0.00 0.00 38.14 2.69
142 143 5.220931 GCCGAAAGCTCTTGTATGATTTCAT 60.221 40.000 0.00 0.00 38.14 2.57
143 144 6.678900 GCCGAAAGCTCTTGTATGATTTCATT 60.679 38.462 0.00 0.00 38.14 2.57
144 145 6.690098 CCGAAAGCTCTTGTATGATTTCATTG 59.310 38.462 0.00 0.00 38.14 2.82
145 146 7.246311 CGAAAGCTCTTGTATGATTTCATTGT 58.754 34.615 0.00 0.00 38.14 2.71
146 147 7.427606 CGAAAGCTCTTGTATGATTTCATTGTC 59.572 37.037 0.00 0.00 38.14 3.18
147 148 7.692460 AAGCTCTTGTATGATTTCATTGTCA 57.308 32.000 0.00 0.00 37.76 3.58
148 149 7.876936 AGCTCTTGTATGATTTCATTGTCAT 57.123 32.000 0.00 0.00 37.76 3.06
149 150 8.289939 AGCTCTTGTATGATTTCATTGTCATT 57.710 30.769 0.00 0.00 37.76 2.57
150 151 9.399797 AGCTCTTGTATGATTTCATTGTCATTA 57.600 29.630 0.00 0.00 37.76 1.90
178 179 8.894409 TGCTCATGAAATTAATTTTCGTACTG 57.106 30.769 14.45 6.85 45.63 2.74
179 180 8.511321 TGCTCATGAAATTAATTTTCGTACTGT 58.489 29.630 14.45 0.00 45.63 3.55
180 181 9.982291 GCTCATGAAATTAATTTTCGTACTGTA 57.018 29.630 14.45 0.00 45.63 2.74
246 247 8.421249 AATTGATTAAACTCTGGATGGTTTGA 57.579 30.769 0.00 0.00 37.01 2.69
247 248 6.817765 TGATTAAACTCTGGATGGTTTGAC 57.182 37.500 0.00 0.00 37.01 3.18
248 249 6.303054 TGATTAAACTCTGGATGGTTTGACA 58.697 36.000 0.00 0.00 37.01 3.58
249 250 6.947733 TGATTAAACTCTGGATGGTTTGACAT 59.052 34.615 0.00 0.00 37.01 3.06
250 251 7.451255 TGATTAAACTCTGGATGGTTTGACATT 59.549 33.333 0.00 0.00 37.01 2.71
251 252 5.458041 AAACTCTGGATGGTTTGACATTG 57.542 39.130 0.00 0.00 34.83 2.82
252 253 4.371624 ACTCTGGATGGTTTGACATTGA 57.628 40.909 0.00 0.00 0.00 2.57
253 254 4.728772 ACTCTGGATGGTTTGACATTGAA 58.271 39.130 0.00 0.00 0.00 2.69
254 255 4.520492 ACTCTGGATGGTTTGACATTGAAC 59.480 41.667 0.00 0.00 0.00 3.18
255 256 4.468713 TCTGGATGGTTTGACATTGAACA 58.531 39.130 0.00 0.00 0.00 3.18
256 257 5.078949 TCTGGATGGTTTGACATTGAACAT 58.921 37.500 0.00 0.00 0.00 2.71
257 258 6.244654 TCTGGATGGTTTGACATTGAACATA 58.755 36.000 0.00 0.00 0.00 2.29
258 259 6.891361 TCTGGATGGTTTGACATTGAACATAT 59.109 34.615 0.00 0.00 0.00 1.78
259 260 7.067372 TCTGGATGGTTTGACATTGAACATATC 59.933 37.037 0.00 0.00 0.00 1.63
260 261 6.891361 TGGATGGTTTGACATTGAACATATCT 59.109 34.615 0.00 0.00 0.00 1.98
261 262 7.396907 TGGATGGTTTGACATTGAACATATCTT 59.603 33.333 0.00 0.00 0.00 2.40
262 263 8.902806 GGATGGTTTGACATTGAACATATCTTA 58.097 33.333 0.00 0.00 0.00 2.10
288 289 9.853177 ATATATGGGGAGTAAAAGAAAACTGAG 57.147 33.333 0.00 0.00 0.00 3.35
289 290 4.725490 TGGGGAGTAAAAGAAAACTGAGG 58.275 43.478 0.00 0.00 0.00 3.86
290 291 4.414182 TGGGGAGTAAAAGAAAACTGAGGA 59.586 41.667 0.00 0.00 0.00 3.71
291 292 5.004448 GGGGAGTAAAAGAAAACTGAGGAG 58.996 45.833 0.00 0.00 0.00 3.69
294 295 6.649973 GGGAGTAAAAGAAAACTGAGGAGTAC 59.350 42.308 0.00 0.00 0.00 2.73
299 300 6.378710 AAAGAAAACTGAGGAGTACTTTGC 57.621 37.500 0.00 0.00 33.23 3.68
317 318 2.585330 TGCAGACAATGACATGGTGTT 58.415 42.857 0.00 0.00 0.00 3.32
318 319 2.957680 TGCAGACAATGACATGGTGTTT 59.042 40.909 0.00 0.00 0.00 2.83
362 363 3.075005 TCACCCGGCTGCTCCTAC 61.075 66.667 0.00 0.00 0.00 3.18
367 383 4.537433 CGGCTGCTCCTACCTGGC 62.537 72.222 0.00 0.00 35.26 4.85
391 407 3.826729 GGCTCCTATCAAAAAGTGTGGTT 59.173 43.478 0.00 0.00 0.00 3.67
395 411 5.313712 TCCTATCAAAAAGTGTGGTTCCTC 58.686 41.667 0.00 0.00 0.00 3.71
397 413 2.661718 TCAAAAAGTGTGGTTCCTCCC 58.338 47.619 0.00 0.00 34.77 4.30
399 415 2.965147 CAAAAAGTGTGGTTCCTCCCAT 59.035 45.455 0.00 0.00 36.74 4.00
400 416 2.586648 AAAGTGTGGTTCCTCCCATC 57.413 50.000 0.00 0.00 36.74 3.51
401 417 1.747444 AAGTGTGGTTCCTCCCATCT 58.253 50.000 0.00 0.00 36.74 2.90
402 418 2.642171 AGTGTGGTTCCTCCCATCTA 57.358 50.000 0.00 0.00 36.74 1.98
403 419 2.188817 AGTGTGGTTCCTCCCATCTAC 58.811 52.381 0.00 0.00 36.74 2.59
404 420 2.188817 GTGTGGTTCCTCCCATCTACT 58.811 52.381 0.00 0.00 36.74 2.57
405 421 2.168728 GTGTGGTTCCTCCCATCTACTC 59.831 54.545 0.00 0.00 36.74 2.59
406 422 2.044492 TGTGGTTCCTCCCATCTACTCT 59.956 50.000 0.00 0.00 36.74 3.24
408 424 3.519913 GTGGTTCCTCCCATCTACTCTTT 59.480 47.826 0.00 0.00 36.74 2.52
411 427 2.667470 TCCTCCCATCTACTCTTTCCG 58.333 52.381 0.00 0.00 0.00 4.30
412 428 2.024273 TCCTCCCATCTACTCTTTCCGT 60.024 50.000 0.00 0.00 0.00 4.69
413 429 2.766828 CCTCCCATCTACTCTTTCCGTT 59.233 50.000 0.00 0.00 0.00 4.44
414 430 3.181474 CCTCCCATCTACTCTTTCCGTTC 60.181 52.174 0.00 0.00 0.00 3.95
420 436 5.648092 CCATCTACTCTTTCCGTTCCAAAAT 59.352 40.000 0.00 0.00 0.00 1.82
422 438 7.011482 CCATCTACTCTTTCCGTTCCAAAATAG 59.989 40.741 0.00 0.00 0.00 1.73
424 440 7.848128 TCTACTCTTTCCGTTCCAAAATAGAT 58.152 34.615 0.00 0.00 0.00 1.98
425 441 6.743575 ACTCTTTCCGTTCCAAAATAGATG 57.256 37.500 0.00 0.00 0.00 2.90
426 442 6.472887 ACTCTTTCCGTTCCAAAATAGATGA 58.527 36.000 0.00 0.00 0.00 2.92
428 444 5.646360 TCTTTCCGTTCCAAAATAGATGACC 59.354 40.000 0.00 0.00 0.00 4.02
429 445 3.881220 TCCGTTCCAAAATAGATGACCC 58.119 45.455 0.00 0.00 0.00 4.46
430 446 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
431 447 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
432 448 4.142469 CCGTTCCAAAATAGATGACCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
433 449 4.700213 CGTTCCAAAATAGATGACCCAACT 59.300 41.667 0.00 0.00 0.00 3.16
434 450 5.183140 CGTTCCAAAATAGATGACCCAACTT 59.817 40.000 0.00 0.00 0.00 2.66
435 451 6.294508 CGTTCCAAAATAGATGACCCAACTTT 60.295 38.462 0.00 0.00 0.00 2.66
436 452 6.588719 TCCAAAATAGATGACCCAACTTTG 57.411 37.500 0.00 0.00 0.00 2.77
437 453 6.074648 TCCAAAATAGATGACCCAACTTTGT 58.925 36.000 0.00 0.00 0.00 2.83
438 454 6.553100 TCCAAAATAGATGACCCAACTTTGTT 59.447 34.615 0.00 0.00 0.00 2.83
439 455 7.726291 TCCAAAATAGATGACCCAACTTTGTTA 59.274 33.333 0.00 0.00 0.00 2.41
440 456 8.364142 CCAAAATAGATGACCCAACTTTGTTAA 58.636 33.333 0.00 0.00 0.00 2.01
441 457 9.927668 CAAAATAGATGACCCAACTTTGTTAAT 57.072 29.630 0.00 0.00 0.00 1.40
443 459 8.877864 AATAGATGACCCAACTTTGTTAATCA 57.122 30.769 0.00 0.00 0.00 2.57
444 460 9.479549 AATAGATGACCCAACTTTGTTAATCAT 57.520 29.630 0.00 0.00 0.00 2.45
445 461 7.396540 AGATGACCCAACTTTGTTAATCATC 57.603 36.000 15.39 15.39 40.87 2.92
446 462 7.177878 AGATGACCCAACTTTGTTAATCATCT 58.822 34.615 17.77 17.77 44.11 2.90
447 463 8.328758 AGATGACCCAACTTTGTTAATCATCTA 58.671 33.333 19.88 0.00 45.98 1.98
448 464 9.125026 GATGACCCAACTTTGTTAATCATCTAT 57.875 33.333 15.65 0.00 38.65 1.98
449 465 8.877864 TGACCCAACTTTGTTAATCATCTATT 57.122 30.769 0.00 0.00 0.00 1.73
450 466 9.308000 TGACCCAACTTTGTTAATCATCTATTT 57.692 29.630 0.00 0.00 0.00 1.40
452 468 9.927668 ACCCAACTTTGTTAATCATCTATTTTG 57.072 29.630 0.00 0.00 0.00 2.44
461 477 8.673711 TGTTAATCATCTATTTTGAAACGGAGG 58.326 33.333 0.00 0.00 0.00 4.30
462 478 6.699575 AATCATCTATTTTGAAACGGAGGG 57.300 37.500 0.00 0.00 0.00 4.30
463 479 5.429681 TCATCTATTTTGAAACGGAGGGA 57.570 39.130 0.00 0.00 0.00 4.20
464 480 5.428253 TCATCTATTTTGAAACGGAGGGAG 58.572 41.667 0.00 0.00 0.00 4.30
543 561 3.417224 ATGACACGCACGCTGCTG 61.417 61.111 0.00 7.68 42.25 4.41
555 573 0.105593 CGCTGCTGTCCACTATCCAT 59.894 55.000 0.00 0.00 0.00 3.41
587 605 0.855349 CGCTCTAATGATCACACGCC 59.145 55.000 0.00 0.00 0.00 5.68
606 624 3.074412 GCCTGTGATTCGGAAAGAAGAA 58.926 45.455 0.00 0.00 42.92 2.52
610 628 5.645497 CCTGTGATTCGGAAAGAAGAAGAAT 59.355 40.000 0.00 0.00 42.92 2.40
618 636 9.899226 ATTCGGAAAGAAGAAGAATTTGTTAAG 57.101 29.630 0.00 0.00 42.92 1.85
621 639 9.730420 CGGAAAGAAGAAGAATTTGTTAAGAAA 57.270 29.630 0.00 0.00 0.00 2.52
649 667 8.908786 AGGAAAAATGATGATCACATATACGT 57.091 30.769 0.00 0.00 36.82 3.57
650 668 9.996554 AGGAAAAATGATGATCACATATACGTA 57.003 29.630 0.00 0.00 36.82 3.57
697 719 0.948623 CTGATTGCGGGAACACGACA 60.949 55.000 0.00 0.00 35.47 4.35
947 1012 4.600062 TCACTCACCTGCTCTTCAGTATA 58.400 43.478 0.00 0.00 41.25 1.47
948 1013 4.399618 TCACTCACCTGCTCTTCAGTATAC 59.600 45.833 0.00 0.00 41.25 1.47
949 1014 4.400884 CACTCACCTGCTCTTCAGTATACT 59.599 45.833 0.00 0.00 41.25 2.12
950 1015 5.020132 ACTCACCTGCTCTTCAGTATACTT 58.980 41.667 1.56 0.00 41.25 2.24
1301 1378 0.976641 TCCAGGTAGCACTGACAAGG 59.023 55.000 4.85 0.00 40.97 3.61
1306 1383 3.449018 CAGGTAGCACTGACAAGGTAGAT 59.551 47.826 0.00 0.00 40.97 1.98
1335 1412 4.911514 TTTTTGGCCTTATCTTATCGGC 57.088 40.909 3.32 0.00 41.75 5.54
1365 1442 5.599999 ATGTCAGACATGGAGGTAAGTAC 57.400 43.478 15.67 0.00 37.45 2.73
1366 1443 3.767673 TGTCAGACATGGAGGTAAGTACC 59.232 47.826 0.00 0.00 46.82 3.34
1390 1467 4.450053 GCAGGAGAGCTCAGATTTAACAT 58.550 43.478 17.77 0.00 0.00 2.71
1395 1472 8.557864 CAGGAGAGCTCAGATTTAACATAATTG 58.442 37.037 17.77 0.00 0.00 2.32
1416 1493 8.500753 AATTGATTTACGGTAATGCTAACTGA 57.499 30.769 0.73 0.00 0.00 3.41
1417 1494 6.897259 TGATTTACGGTAATGCTAACTGAC 57.103 37.500 0.73 0.00 0.00 3.51
1418 1495 5.517411 TGATTTACGGTAATGCTAACTGACG 59.483 40.000 0.73 0.00 0.00 4.35
1419 1496 4.700268 TTACGGTAATGCTAACTGACGA 57.300 40.909 0.00 0.00 0.00 4.20
1420 1497 3.581024 ACGGTAATGCTAACTGACGAA 57.419 42.857 0.00 0.00 0.00 3.85
1421 1498 4.119442 ACGGTAATGCTAACTGACGAAT 57.881 40.909 0.00 0.00 0.00 3.34
1422 1499 3.863424 ACGGTAATGCTAACTGACGAATG 59.137 43.478 0.00 0.00 0.00 2.67
1423 1500 3.863424 CGGTAATGCTAACTGACGAATGT 59.137 43.478 0.00 0.00 0.00 2.71
1424 1501 4.328983 CGGTAATGCTAACTGACGAATGTT 59.671 41.667 0.00 0.00 0.00 2.71
1425 1502 5.500290 CGGTAATGCTAACTGACGAATGTTC 60.500 44.000 0.00 0.00 0.00 3.18
1426 1503 4.946784 AATGCTAACTGACGAATGTTCC 57.053 40.909 0.00 0.00 0.00 3.62
1427 1504 3.678056 TGCTAACTGACGAATGTTCCT 57.322 42.857 0.00 0.00 0.00 3.36
1428 1505 4.002906 TGCTAACTGACGAATGTTCCTT 57.997 40.909 0.00 0.00 0.00 3.36
1429 1506 3.745975 TGCTAACTGACGAATGTTCCTTG 59.254 43.478 0.00 0.00 0.00 3.61
1430 1507 3.125316 GCTAACTGACGAATGTTCCTTGG 59.875 47.826 0.00 0.00 0.00 3.61
1431 1508 2.185004 ACTGACGAATGTTCCTTGGG 57.815 50.000 0.00 0.00 0.00 4.12
1432 1509 1.697432 ACTGACGAATGTTCCTTGGGA 59.303 47.619 0.00 0.00 0.00 4.37
1433 1510 2.105821 ACTGACGAATGTTCCTTGGGAA 59.894 45.455 0.00 0.00 39.66 3.97
1434 1511 2.744202 CTGACGAATGTTCCTTGGGAAG 59.256 50.000 0.00 0.00 42.88 3.46
1445 1522 3.495729 TGGGAAGGAACTCCCAGC 58.504 61.111 7.29 0.00 45.94 4.85
1446 1523 2.269241 GGGAAGGAACTCCCAGCG 59.731 66.667 3.70 0.00 29.81 5.18
1447 1524 2.291043 GGGAAGGAACTCCCAGCGA 61.291 63.158 3.70 0.00 29.81 4.93
1448 1525 1.079057 GGAAGGAACTCCCAGCGAC 60.079 63.158 0.00 0.00 38.49 5.19
1449 1526 1.079057 GAAGGAACTCCCAGCGACC 60.079 63.158 0.00 0.00 38.49 4.79
1450 1527 2.837371 GAAGGAACTCCCAGCGACCG 62.837 65.000 0.00 0.00 38.49 4.79
1451 1528 3.692406 GGAACTCCCAGCGACCGT 61.692 66.667 0.00 0.00 34.14 4.83
1452 1529 2.342648 GAACTCCCAGCGACCGTT 59.657 61.111 0.00 0.00 0.00 4.44
1453 1530 1.301479 GAACTCCCAGCGACCGTTT 60.301 57.895 0.00 0.00 0.00 3.60
1454 1531 1.566018 GAACTCCCAGCGACCGTTTG 61.566 60.000 0.00 0.00 0.00 2.93
1455 1532 2.035237 AACTCCCAGCGACCGTTTGA 62.035 55.000 0.00 0.00 0.00 2.69
1456 1533 1.079127 CTCCCAGCGACCGTTTGAT 60.079 57.895 0.00 0.00 0.00 2.57
1457 1534 1.079405 TCCCAGCGACCGTTTGATC 60.079 57.895 0.00 0.00 0.00 2.92
1458 1535 2.452813 CCCAGCGACCGTTTGATCG 61.453 63.158 0.00 0.00 41.32 3.69
1459 1536 1.445410 CCAGCGACCGTTTGATCGA 60.445 57.895 0.00 0.00 40.86 3.59
1460 1537 1.413767 CCAGCGACCGTTTGATCGAG 61.414 60.000 0.00 0.00 40.86 4.04
1461 1538 1.153823 AGCGACCGTTTGATCGAGG 60.154 57.895 0.00 0.00 40.86 4.63
1462 1539 1.445582 GCGACCGTTTGATCGAGGT 60.446 57.895 0.00 0.00 40.86 3.85
1466 1543 2.536761 ACCGTTTGATCGAGGTCAAA 57.463 45.000 9.57 9.57 43.66 2.69
1467 1544 2.413837 ACCGTTTGATCGAGGTCAAAG 58.586 47.619 13.16 6.77 45.71 2.77
1468 1545 2.036733 ACCGTTTGATCGAGGTCAAAGA 59.963 45.455 13.16 0.00 45.71 2.52
1469 1546 3.064207 CCGTTTGATCGAGGTCAAAGAA 58.936 45.455 13.16 0.00 45.71 2.52
1470 1547 3.496884 CCGTTTGATCGAGGTCAAAGAAA 59.503 43.478 13.16 0.00 45.71 2.52
1471 1548 4.377431 CCGTTTGATCGAGGTCAAAGAAAG 60.377 45.833 13.16 6.76 45.71 2.62
1472 1549 4.377431 CGTTTGATCGAGGTCAAAGAAAGG 60.377 45.833 13.16 0.00 45.71 3.11
1473 1550 4.617253 TTGATCGAGGTCAAAGAAAGGA 57.383 40.909 0.00 0.00 35.31 3.36
1474 1551 4.617253 TGATCGAGGTCAAAGAAAGGAA 57.383 40.909 0.00 0.00 0.00 3.36
1475 1552 4.569943 TGATCGAGGTCAAAGAAAGGAAG 58.430 43.478 0.00 0.00 0.00 3.46
1476 1553 3.402628 TCGAGGTCAAAGAAAGGAAGG 57.597 47.619 0.00 0.00 0.00 3.46
1477 1554 1.807142 CGAGGTCAAAGAAAGGAAGGC 59.193 52.381 0.00 0.00 0.00 4.35
1478 1555 2.810400 CGAGGTCAAAGAAAGGAAGGCA 60.810 50.000 0.00 0.00 0.00 4.75
1479 1556 2.816672 GAGGTCAAAGAAAGGAAGGCAG 59.183 50.000 0.00 0.00 0.00 4.85
1480 1557 1.889170 GGTCAAAGAAAGGAAGGCAGG 59.111 52.381 0.00 0.00 0.00 4.85
1481 1558 2.587522 GTCAAAGAAAGGAAGGCAGGT 58.412 47.619 0.00 0.00 0.00 4.00
1482 1559 2.959030 GTCAAAGAAAGGAAGGCAGGTT 59.041 45.455 0.00 0.00 0.00 3.50
1483 1560 3.384789 GTCAAAGAAAGGAAGGCAGGTTT 59.615 43.478 0.00 0.00 0.00 3.27
1484 1561 4.030216 TCAAAGAAAGGAAGGCAGGTTTT 58.970 39.130 0.00 0.00 0.00 2.43
1485 1562 4.469586 TCAAAGAAAGGAAGGCAGGTTTTT 59.530 37.500 0.00 0.00 0.00 1.94
1516 1593 2.988010 AAATGCTATCTCCAGCGTGA 57.012 45.000 0.00 0.00 44.88 4.35
1517 1594 2.988010 AATGCTATCTCCAGCGTGAA 57.012 45.000 0.00 0.00 44.88 3.18
1518 1595 2.988010 ATGCTATCTCCAGCGTGAAA 57.012 45.000 0.00 0.00 44.88 2.69
1519 1596 2.988010 TGCTATCTCCAGCGTGAAAT 57.012 45.000 0.00 0.00 44.88 2.17
1520 1597 3.266510 TGCTATCTCCAGCGTGAAATT 57.733 42.857 0.00 0.00 44.88 1.82
1521 1598 2.938451 TGCTATCTCCAGCGTGAAATTG 59.062 45.455 0.00 0.00 44.88 2.32
1522 1599 3.198068 GCTATCTCCAGCGTGAAATTGA 58.802 45.455 0.00 0.00 0.00 2.57
1523 1600 3.001736 GCTATCTCCAGCGTGAAATTGAC 59.998 47.826 0.00 0.00 0.00 3.18
1524 1601 2.542020 TCTCCAGCGTGAAATTGACA 57.458 45.000 0.00 0.00 0.00 3.58
1525 1602 3.057969 TCTCCAGCGTGAAATTGACAT 57.942 42.857 0.00 0.00 0.00 3.06
1526 1603 2.743664 TCTCCAGCGTGAAATTGACATG 59.256 45.455 0.00 0.00 0.00 3.21
1527 1604 1.199789 TCCAGCGTGAAATTGACATGC 59.800 47.619 17.06 17.06 46.58 4.06
1533 1610 4.913376 GCGTGAAATTGACATGCTAATCT 58.087 39.130 17.33 0.00 43.99 2.40
1534 1611 4.966366 GCGTGAAATTGACATGCTAATCTC 59.034 41.667 17.33 0.00 43.99 2.75
1535 1612 5.447683 GCGTGAAATTGACATGCTAATCTCA 60.448 40.000 17.33 0.00 43.99 3.27
1536 1613 6.545508 CGTGAAATTGACATGCTAATCTCAA 58.454 36.000 0.00 0.00 0.00 3.02
1537 1614 7.022979 CGTGAAATTGACATGCTAATCTCAAA 58.977 34.615 0.00 0.00 26.51 2.69
1538 1615 7.538334 CGTGAAATTGACATGCTAATCTCAAAA 59.462 33.333 0.00 0.00 26.51 2.44
1539 1616 9.195411 GTGAAATTGACATGCTAATCTCAAAAA 57.805 29.630 0.00 0.00 26.51 1.94
1557 1634 4.600692 AAAAATTGCCACTCCCTACAAC 57.399 40.909 0.00 0.00 0.00 3.32
1558 1635 3.525800 AAATTGCCACTCCCTACAACT 57.474 42.857 0.00 0.00 0.00 3.16
1559 1636 4.650972 AAATTGCCACTCCCTACAACTA 57.349 40.909 0.00 0.00 0.00 2.24
1560 1637 4.650972 AATTGCCACTCCCTACAACTAA 57.349 40.909 0.00 0.00 0.00 2.24
1561 1638 4.650972 ATTGCCACTCCCTACAACTAAA 57.349 40.909 0.00 0.00 0.00 1.85
1562 1639 4.440826 TTGCCACTCCCTACAACTAAAA 57.559 40.909 0.00 0.00 0.00 1.52
1563 1640 4.650972 TGCCACTCCCTACAACTAAAAT 57.349 40.909 0.00 0.00 0.00 1.82
1564 1641 4.993028 TGCCACTCCCTACAACTAAAATT 58.007 39.130 0.00 0.00 0.00 1.82
1565 1642 4.764823 TGCCACTCCCTACAACTAAAATTG 59.235 41.667 0.00 0.00 35.59 2.32
1566 1643 4.380550 GCCACTCCCTACAACTAAAATTGC 60.381 45.833 0.00 0.00 32.47 3.56
1567 1644 4.157840 CCACTCCCTACAACTAAAATTGCC 59.842 45.833 0.00 0.00 32.47 4.52
1568 1645 4.764823 CACTCCCTACAACTAAAATTGCCA 59.235 41.667 0.00 0.00 32.47 4.92
1569 1646 5.418840 CACTCCCTACAACTAAAATTGCCAT 59.581 40.000 0.00 0.00 32.47 4.40
1570 1647 5.652452 ACTCCCTACAACTAAAATTGCCATC 59.348 40.000 0.00 0.00 32.47 3.51
1571 1648 4.953579 TCCCTACAACTAAAATTGCCATCC 59.046 41.667 0.00 0.00 32.47 3.51
1572 1649 4.956075 CCCTACAACTAAAATTGCCATCCT 59.044 41.667 0.00 0.00 32.47 3.24
1573 1650 5.067805 CCCTACAACTAAAATTGCCATCCTC 59.932 44.000 0.00 0.00 32.47 3.71
1574 1651 5.067805 CCTACAACTAAAATTGCCATCCTCC 59.932 44.000 0.00 0.00 32.47 4.30
1575 1652 4.415596 ACAACTAAAATTGCCATCCTCCA 58.584 39.130 0.00 0.00 32.47 3.86
1576 1653 4.220602 ACAACTAAAATTGCCATCCTCCAC 59.779 41.667 0.00 0.00 32.47 4.02
1577 1654 4.046286 ACTAAAATTGCCATCCTCCACA 57.954 40.909 0.00 0.00 0.00 4.17
1578 1655 4.019174 ACTAAAATTGCCATCCTCCACAG 58.981 43.478 0.00 0.00 0.00 3.66
1579 1656 1.188863 AAATTGCCATCCTCCACAGC 58.811 50.000 0.00 0.00 0.00 4.40
1580 1657 1.033746 AATTGCCATCCTCCACAGCG 61.034 55.000 0.00 0.00 0.00 5.18
1581 1658 1.913951 ATTGCCATCCTCCACAGCGA 61.914 55.000 0.00 0.00 0.00 4.93
1582 1659 2.123248 TTGCCATCCTCCACAGCGAA 62.123 55.000 0.00 0.00 0.00 4.70
1583 1660 2.109126 GCCATCCTCCACAGCGAAC 61.109 63.158 0.00 0.00 0.00 3.95
1584 1661 1.811266 CCATCCTCCACAGCGAACG 60.811 63.158 0.00 0.00 0.00 3.95
1585 1662 1.079819 CATCCTCCACAGCGAACGT 60.080 57.895 0.00 0.00 0.00 3.99
1586 1663 0.670546 CATCCTCCACAGCGAACGTT 60.671 55.000 0.00 0.00 0.00 3.99
1587 1664 0.389948 ATCCTCCACAGCGAACGTTC 60.390 55.000 18.47 18.47 0.00 3.95
1596 1673 2.806198 CGAACGTTCGCCGGCTAA 60.806 61.111 34.54 18.39 44.26 3.09
1597 1674 2.374226 CGAACGTTCGCCGGCTAAA 61.374 57.895 34.54 16.05 44.26 1.85
1598 1675 1.861440 GAACGTTCGCCGGCTAAAA 59.139 52.632 26.68 13.28 42.24 1.52
1599 1676 0.179233 GAACGTTCGCCGGCTAAAAG 60.179 55.000 26.68 21.48 42.24 2.27
1600 1677 1.571215 AACGTTCGCCGGCTAAAAGG 61.571 55.000 26.68 21.46 42.24 3.11
1601 1678 2.746803 CGTTCGCCGGCTAAAAGGG 61.747 63.158 26.68 6.92 0.00 3.95
1602 1679 2.748647 TTCGCCGGCTAAAAGGGC 60.749 61.111 26.68 0.00 43.42 5.19
1603 1680 4.789123 TCGCCGGCTAAAAGGGCC 62.789 66.667 26.68 0.00 43.99 5.80
1615 1692 5.977635 GCTAAAAGGGCCATTGATTTAAGT 58.022 37.500 1.95 0.00 0.00 2.24
1616 1693 6.042777 GCTAAAAGGGCCATTGATTTAAGTC 58.957 40.000 1.95 0.00 0.00 3.01
1617 1694 6.127338 GCTAAAAGGGCCATTGATTTAAGTCT 60.127 38.462 1.95 0.00 0.00 3.24
1618 1695 5.921962 AAAGGGCCATTGATTTAAGTCTC 57.078 39.130 1.95 0.00 0.00 3.36
1619 1696 3.903467 AGGGCCATTGATTTAAGTCTCC 58.097 45.455 6.18 0.00 0.00 3.71
1620 1697 2.959030 GGGCCATTGATTTAAGTCTCCC 59.041 50.000 4.39 0.00 0.00 4.30
1621 1698 2.959030 GGCCATTGATTTAAGTCTCCCC 59.041 50.000 0.00 0.00 0.00 4.81
1622 1699 3.627237 GGCCATTGATTTAAGTCTCCCCA 60.627 47.826 0.00 0.00 0.00 4.96
1623 1700 4.218312 GCCATTGATTTAAGTCTCCCCAT 58.782 43.478 0.00 0.00 0.00 4.00
1624 1701 5.385198 GCCATTGATTTAAGTCTCCCCATA 58.615 41.667 0.00 0.00 0.00 2.74
1625 1702 5.833131 GCCATTGATTTAAGTCTCCCCATAA 59.167 40.000 0.00 0.00 0.00 1.90
1626 1703 6.494835 GCCATTGATTTAAGTCTCCCCATAAT 59.505 38.462 0.00 0.00 0.00 1.28
1627 1704 7.015584 GCCATTGATTTAAGTCTCCCCATAATT 59.984 37.037 0.00 0.00 0.00 1.40
3706 7138 0.597568 ACCGAAATGACCGTCACGTA 59.402 50.000 2.57 0.00 0.00 3.57
3773 7205 7.766219 TCAAAGTCAGTTTACAGACTGTAAC 57.234 36.000 24.42 18.87 41.97 2.50
3775 7207 7.491372 TCAAAGTCAGTTTACAGACTGTAACTG 59.509 37.037 29.12 29.12 41.97 3.16
3777 7209 6.505272 AGTCAGTTTACAGACTGTAACTGTC 58.495 40.000 30.89 28.19 45.58 3.51
3778 7210 6.096423 AGTCAGTTTACAGACTGTAACTGTCA 59.904 38.462 30.89 21.63 45.58 3.58
3779 7211 6.198591 GTCAGTTTACAGACTGTAACTGTCAC 59.801 42.308 30.89 25.17 45.58 3.67
3780 7212 6.096423 TCAGTTTACAGACTGTAACTGTCACT 59.904 38.462 30.89 25.47 45.58 3.41
3781 7213 6.757010 CAGTTTACAGACTGTAACTGTCACTT 59.243 38.462 28.01 14.79 45.58 3.16
3782 7214 7.277981 CAGTTTACAGACTGTAACTGTCACTTT 59.722 37.037 28.01 12.42 45.58 2.66
3783 7215 7.822822 AGTTTACAGACTGTAACTGTCACTTTT 59.177 33.333 24.42 4.99 45.58 2.27
3784 7216 7.534085 TTACAGACTGTAACTGTCACTTTTG 57.466 36.000 21.54 1.07 45.58 2.44
3785 7217 5.488341 ACAGACTGTAACTGTCACTTTTGT 58.512 37.500 6.24 1.59 43.84 2.83
3786 7218 6.636705 ACAGACTGTAACTGTCACTTTTGTA 58.363 36.000 6.24 0.00 43.84 2.41
3787 7219 6.534079 ACAGACTGTAACTGTCACTTTTGTAC 59.466 38.462 6.24 0.00 43.84 2.90
3788 7220 6.533723 CAGACTGTAACTGTCACTTTTGTACA 59.466 38.462 8.31 0.00 35.30 2.90
3789 7221 7.224753 CAGACTGTAACTGTCACTTTTGTACAT 59.775 37.037 0.00 0.00 35.30 2.29
3790 7222 7.438459 AGACTGTAACTGTCACTTTTGTACATC 59.562 37.037 0.00 0.00 35.30 3.06
3791 7223 6.200286 ACTGTAACTGTCACTTTTGTACATCG 59.800 38.462 0.00 0.00 0.00 3.84
3792 7224 6.044046 TGTAACTGTCACTTTTGTACATCGT 58.956 36.000 0.00 0.00 0.00 3.73
3793 7225 7.201835 TGTAACTGTCACTTTTGTACATCGTA 58.798 34.615 0.00 0.00 0.00 3.43
3794 7226 7.705752 TGTAACTGTCACTTTTGTACATCGTAA 59.294 33.333 0.00 0.00 0.00 3.18
3795 7227 7.542534 AACTGTCACTTTTGTACATCGTAAA 57.457 32.000 0.00 0.00 0.00 2.01
3796 7228 7.542534 ACTGTCACTTTTGTACATCGTAAAA 57.457 32.000 0.00 0.00 0.00 1.52
3797 7229 7.627340 ACTGTCACTTTTGTACATCGTAAAAG 58.373 34.615 13.10 13.10 43.49 2.27
3798 7230 7.493320 ACTGTCACTTTTGTACATCGTAAAAGA 59.507 33.333 19.09 6.33 41.55 2.52
3799 7231 7.847487 TGTCACTTTTGTACATCGTAAAAGAG 58.153 34.615 19.09 13.28 41.55 2.85
3800 7232 7.042321 TGTCACTTTTGTACATCGTAAAAGAGG 60.042 37.037 19.09 12.42 41.55 3.69
3801 7233 6.425721 TCACTTTTGTACATCGTAAAAGAGGG 59.574 38.462 19.09 10.65 41.55 4.30
3802 7234 6.204108 CACTTTTGTACATCGTAAAAGAGGGT 59.796 38.462 19.09 0.64 41.55 4.34
3803 7235 6.204108 ACTTTTGTACATCGTAAAAGAGGGTG 59.796 38.462 19.09 0.00 41.55 4.61
3804 7236 5.471556 TTGTACATCGTAAAAGAGGGTGA 57.528 39.130 0.00 0.00 0.00 4.02
3805 7237 4.813027 TGTACATCGTAAAAGAGGGTGAC 58.187 43.478 0.00 0.00 0.00 3.67
3818 7250 3.652581 GGTGACCTTCCTTTCTGGG 57.347 57.895 0.00 0.00 36.20 4.45
3819 7251 0.771755 GGTGACCTTCCTTTCTGGGT 59.228 55.000 0.00 0.00 36.20 4.51
3820 7252 1.145119 GGTGACCTTCCTTTCTGGGTT 59.855 52.381 0.00 0.00 36.20 4.11
3821 7253 2.424379 GGTGACCTTCCTTTCTGGGTTT 60.424 50.000 0.00 0.00 36.20 3.27
3822 7254 2.885266 GTGACCTTCCTTTCTGGGTTTC 59.115 50.000 0.00 0.00 36.20 2.78
3823 7255 2.152016 GACCTTCCTTTCTGGGTTTCG 58.848 52.381 0.00 0.00 36.20 3.46
3824 7256 1.772453 ACCTTCCTTTCTGGGTTTCGA 59.228 47.619 0.00 0.00 36.20 3.71
3825 7257 2.152016 CCTTCCTTTCTGGGTTTCGAC 58.848 52.381 0.00 0.00 36.20 4.20
3826 7258 1.798813 CTTCCTTTCTGGGTTTCGACG 59.201 52.381 0.00 0.00 36.20 5.12
3827 7259 1.042229 TCCTTTCTGGGTTTCGACGA 58.958 50.000 0.00 0.00 36.20 4.20
3828 7260 1.621814 TCCTTTCTGGGTTTCGACGAT 59.378 47.619 0.00 0.00 36.20 3.73
3829 7261 2.000447 CCTTTCTGGGTTTCGACGATC 59.000 52.381 0.00 0.00 0.00 3.69
3830 7262 2.353803 CCTTTCTGGGTTTCGACGATCT 60.354 50.000 0.00 0.00 0.00 2.75
3831 7263 3.326747 CTTTCTGGGTTTCGACGATCTT 58.673 45.455 0.00 0.00 0.00 2.40
3832 7264 3.396260 TTCTGGGTTTCGACGATCTTT 57.604 42.857 0.00 0.00 0.00 2.52
3833 7265 2.955614 TCTGGGTTTCGACGATCTTTC 58.044 47.619 0.00 0.00 0.00 2.62
3834 7266 2.561419 TCTGGGTTTCGACGATCTTTCT 59.439 45.455 0.00 0.00 0.00 2.52
3835 7267 3.760151 TCTGGGTTTCGACGATCTTTCTA 59.240 43.478 0.00 0.00 0.00 2.10
3836 7268 4.401519 TCTGGGTTTCGACGATCTTTCTAT 59.598 41.667 0.00 0.00 0.00 1.98
3837 7269 4.679662 TGGGTTTCGACGATCTTTCTATC 58.320 43.478 0.00 0.00 0.00 2.08
3838 7270 4.158949 TGGGTTTCGACGATCTTTCTATCA 59.841 41.667 0.00 0.00 0.00 2.15
3839 7271 5.163447 TGGGTTTCGACGATCTTTCTATCAT 60.163 40.000 0.00 0.00 0.00 2.45
3840 7272 5.753921 GGGTTTCGACGATCTTTCTATCATT 59.246 40.000 0.00 0.00 0.00 2.57
3841 7273 6.258068 GGGTTTCGACGATCTTTCTATCATTT 59.742 38.462 0.00 0.00 0.00 2.32
3842 7274 7.437267 GGGTTTCGACGATCTTTCTATCATTTA 59.563 37.037 0.00 0.00 0.00 1.40
3846 7278 9.529325 TTCGACGATCTTTCTATCATTTATGTT 57.471 29.630 0.00 0.00 0.00 2.71
3867 7299 5.189736 TGTTACTCTTCCATAGCAGGAATGT 59.810 40.000 5.86 9.78 46.05 2.71
3875 7308 5.368145 TCCATAGCAGGAATGTATGTGAAC 58.632 41.667 0.00 0.00 33.93 3.18
3878 7311 6.238566 CCATAGCAGGAATGTATGTGAACTTG 60.239 42.308 0.00 0.00 0.00 3.16
3879 7312 4.012374 AGCAGGAATGTATGTGAACTTGG 58.988 43.478 0.00 0.00 0.00 3.61
3903 7336 2.579624 TCCCAGGATAACAGCCCTTA 57.420 50.000 0.00 0.00 0.00 2.69
3910 7343 5.338871 CCAGGATAACAGCCCTTAGTTGTAA 60.339 44.000 0.00 0.00 39.27 2.41
3911 7344 6.177610 CAGGATAACAGCCCTTAGTTGTAAA 58.822 40.000 0.00 0.00 39.27 2.01
3921 7354 6.553476 AGCCCTTAGTTGTAAAAGAAAACCAT 59.447 34.615 0.00 0.00 0.00 3.55
3924 7357 9.292195 CCCTTAGTTGTAAAAGAAAACCATAGA 57.708 33.333 0.00 0.00 0.00 1.98
3930 7363 9.811995 GTTGTAAAAGAAAACCATAGACCTTTT 57.188 29.630 0.00 0.00 37.52 2.27
3964 7404 3.560636 TTATAAGCACCAGAGCCCTTC 57.439 47.619 0.00 0.00 34.23 3.46
3965 7405 1.289160 ATAAGCACCAGAGCCCTTCA 58.711 50.000 0.00 0.00 34.23 3.02
3975 7415 1.209990 AGAGCCCTTCAAGCATCTCTG 59.790 52.381 1.84 0.00 30.58 3.35
3981 7421 4.267536 CCCTTCAAGCATCTCTGATCAAA 58.732 43.478 0.00 0.00 0.00 2.69
3982 7422 4.096081 CCCTTCAAGCATCTCTGATCAAAC 59.904 45.833 0.00 0.00 0.00 2.93
3984 7424 4.564782 TCAAGCATCTCTGATCAAACCT 57.435 40.909 0.00 0.00 0.00 3.50
3985 7425 4.511527 TCAAGCATCTCTGATCAAACCTC 58.488 43.478 0.00 0.00 0.00 3.85
3990 7431 5.771666 AGCATCTCTGATCAAACCTCAAAAA 59.228 36.000 0.00 0.00 0.00 1.94
4003 7444 9.635404 TCAAACCTCAAAAATTCTAACTCCTAA 57.365 29.630 0.00 0.00 0.00 2.69
4007 7448 9.862149 ACCTCAAAAATTCTAACTCCTAAAAGA 57.138 29.630 0.00 0.00 0.00 2.52
4017 7458 8.154649 TCTAACTCCTAAAAGAAAGCAGTTTG 57.845 34.615 0.00 0.00 0.00 2.93
4019 7460 6.625873 ACTCCTAAAAGAAAGCAGTTTGAG 57.374 37.500 0.00 0.00 0.00 3.02
4023 7464 6.708054 TCCTAAAAGAAAGCAGTTTGAGAGAG 59.292 38.462 0.00 0.00 0.00 3.20
4025 7466 6.616774 AAAAGAAAGCAGTTTGAGAGAGAG 57.383 37.500 0.00 0.00 0.00 3.20
4027 7468 5.543507 AGAAAGCAGTTTGAGAGAGAGAA 57.456 39.130 0.00 0.00 0.00 2.87
4029 7470 6.352516 AGAAAGCAGTTTGAGAGAGAGAAAA 58.647 36.000 0.00 0.00 0.00 2.29
4030 7471 6.825721 AGAAAGCAGTTTGAGAGAGAGAAAAA 59.174 34.615 0.00 0.00 0.00 1.94
4031 7472 7.501892 AGAAAGCAGTTTGAGAGAGAGAAAAAT 59.498 33.333 0.00 0.00 0.00 1.82
4032 7473 8.682936 AAAGCAGTTTGAGAGAGAGAAAAATA 57.317 30.769 0.00 0.00 0.00 1.40
4033 7474 7.903995 AGCAGTTTGAGAGAGAGAAAAATAG 57.096 36.000 0.00 0.00 0.00 1.73
4034 7475 7.449247 AGCAGTTTGAGAGAGAGAAAAATAGT 58.551 34.615 0.00 0.00 0.00 2.12
4042 7483 9.191479 TGAGAGAGAGAAAAATAGTTACCTAGG 57.809 37.037 7.41 7.41 0.00 3.02
4044 7485 9.416284 AGAGAGAGAAAAATAGTTACCTAGGAG 57.584 37.037 17.98 0.00 0.00 3.69
4048 7489 8.041919 AGAGAAAAATAGTTACCTAGGAGCAAC 58.958 37.037 17.98 15.47 0.00 4.17
4049 7490 7.919151 AGAAAAATAGTTACCTAGGAGCAACT 58.081 34.615 17.98 21.12 35.50 3.16
4057 7498 2.291930 ACCTAGGAGCAACTCTAGCAGT 60.292 50.000 17.98 0.00 36.64 4.40
4058 7499 2.360801 CCTAGGAGCAACTCTAGCAGTC 59.639 54.545 1.05 0.00 32.30 3.51
4060 7501 2.534990 AGGAGCAACTCTAGCAGTCTT 58.465 47.619 0.00 0.00 32.30 3.01
4061 7502 2.903135 AGGAGCAACTCTAGCAGTCTTT 59.097 45.455 0.00 0.00 32.30 2.52
4062 7503 2.999355 GGAGCAACTCTAGCAGTCTTTG 59.001 50.000 0.00 0.00 32.30 2.77
4063 7504 3.556004 GGAGCAACTCTAGCAGTCTTTGT 60.556 47.826 0.00 0.00 32.30 2.83
4066 7507 5.415221 AGCAACTCTAGCAGTCTTTGTATC 58.585 41.667 0.00 0.00 32.30 2.24
4067 7508 4.266502 GCAACTCTAGCAGTCTTTGTATCG 59.733 45.833 0.00 0.00 32.30 2.92
4068 7509 5.641709 CAACTCTAGCAGTCTTTGTATCGA 58.358 41.667 0.00 0.00 32.30 3.59
4069 7510 5.238006 ACTCTAGCAGTCTTTGTATCGAC 57.762 43.478 0.00 0.00 0.00 4.20
4070 7511 4.096682 ACTCTAGCAGTCTTTGTATCGACC 59.903 45.833 0.00 0.00 0.00 4.79
4071 7512 4.270834 TCTAGCAGTCTTTGTATCGACCT 58.729 43.478 0.00 0.00 0.00 3.85
4072 7513 3.238108 AGCAGTCTTTGTATCGACCTG 57.762 47.619 0.00 0.00 0.00 4.00
4073 7514 2.826128 AGCAGTCTTTGTATCGACCTGA 59.174 45.455 0.00 0.00 0.00 3.86
4074 7515 3.449018 AGCAGTCTTTGTATCGACCTGAT 59.551 43.478 0.00 0.00 41.30 2.90
4075 7516 3.799420 GCAGTCTTTGTATCGACCTGATC 59.201 47.826 0.00 0.00 38.57 2.92
4106 7548 8.463930 AATAACCGTCAATATGATCATTTGGT 57.536 30.769 14.65 9.91 0.00 3.67
4107 7549 6.377327 AACCGTCAATATGATCATTTGGTC 57.623 37.500 14.65 12.44 0.00 4.02
4108 7550 5.436175 ACCGTCAATATGATCATTTGGTCA 58.564 37.500 14.65 0.00 0.00 4.02
4109 7551 5.528690 ACCGTCAATATGATCATTTGGTCAG 59.471 40.000 14.65 9.97 0.00 3.51
4110 7552 5.759763 CCGTCAATATGATCATTTGGTCAGA 59.240 40.000 14.65 0.00 0.00 3.27
4111 7553 6.260714 CCGTCAATATGATCATTTGGTCAGAA 59.739 38.462 14.65 0.00 0.00 3.02
4112 7554 7.201723 CCGTCAATATGATCATTTGGTCAGAAA 60.202 37.037 14.65 0.00 0.00 2.52
4113 7555 8.183536 CGTCAATATGATCATTTGGTCAGAAAA 58.816 33.333 14.65 0.00 0.00 2.29
4114 7556 9.512435 GTCAATATGATCATTTGGTCAGAAAAG 57.488 33.333 14.65 0.00 0.00 2.27
4115 7557 8.689061 TCAATATGATCATTTGGTCAGAAAAGG 58.311 33.333 14.65 0.00 0.00 3.11
4116 7558 4.789012 TGATCATTTGGTCAGAAAAGGC 57.211 40.909 0.00 0.00 0.00 4.35
4117 7559 3.511146 TGATCATTTGGTCAGAAAAGGCC 59.489 43.478 0.00 0.00 0.00 5.19
4118 7560 2.956132 TCATTTGGTCAGAAAAGGCCA 58.044 42.857 5.01 0.00 0.00 5.36
4119 7561 3.509442 TCATTTGGTCAGAAAAGGCCAT 58.491 40.909 5.01 0.00 0.00 4.40
4120 7562 3.903090 TCATTTGGTCAGAAAAGGCCATT 59.097 39.130 5.01 0.00 0.00 3.16
4121 7563 5.083122 TCATTTGGTCAGAAAAGGCCATTA 58.917 37.500 5.01 0.00 0.00 1.90
4122 7564 5.721000 TCATTTGGTCAGAAAAGGCCATTAT 59.279 36.000 5.01 0.00 0.00 1.28
4123 7565 6.894654 TCATTTGGTCAGAAAAGGCCATTATA 59.105 34.615 5.01 0.00 0.00 0.98
4124 7566 6.773976 TTTGGTCAGAAAAGGCCATTATAG 57.226 37.500 5.01 0.00 0.00 1.31
4130 7572 4.023365 CAGAAAAGGCCATTATAGCAGAGC 60.023 45.833 5.01 0.00 0.00 4.09
4133 7575 1.301677 GGCCATTATAGCAGAGCCGC 61.302 60.000 0.00 0.00 0.00 6.53
4142 7584 4.147449 CAGAGCCGCCATCCGACA 62.147 66.667 0.00 0.00 40.02 4.35
4168 7610 4.024893 CGACCTGCATAATTTATGAAGCGT 60.025 41.667 18.46 15.83 39.99 5.07
4173 7615 4.222114 GCATAATTTATGAAGCGTGCTCC 58.778 43.478 18.46 0.00 38.45 4.70
4174 7616 4.023707 GCATAATTTATGAAGCGTGCTCCT 60.024 41.667 18.46 0.00 38.45 3.69
4181 7623 1.134699 TGAAGCGTGCTCCTTATCCAG 60.135 52.381 0.00 0.00 0.00 3.86
4186 7628 0.817229 GTGCTCCTTATCCAGCCTGC 60.817 60.000 0.00 0.00 34.47 4.85
4187 7629 1.273986 TGCTCCTTATCCAGCCTGCA 61.274 55.000 0.00 0.00 34.47 4.41
4189 7631 1.964552 CTCCTTATCCAGCCTGCAAG 58.035 55.000 0.00 0.00 0.00 4.01
4190 7632 1.211457 CTCCTTATCCAGCCTGCAAGT 59.789 52.381 0.00 0.00 0.00 3.16
4195 7637 0.694771 ATCCAGCCTGCAAGTCTTCA 59.305 50.000 0.00 0.00 0.00 3.02
4202 7644 4.397103 CAGCCTGCAAGTCTTCATATTTGA 59.603 41.667 0.00 0.00 0.00 2.69
4220 7686 2.245438 GAAGGCTAGCTCCGCAACCT 62.245 60.000 15.72 0.00 0.00 3.50
4221 7687 0.976073 AAGGCTAGCTCCGCAACCTA 60.976 55.000 15.72 0.00 29.66 3.08
4230 7696 2.202690 CGCAACCTATCGCACGGA 60.203 61.111 0.00 0.00 0.00 4.69
4231 7697 1.591594 CGCAACCTATCGCACGGAT 60.592 57.895 0.00 0.00 39.25 4.18
4249 7722 4.491409 GGGAGCCCGGCCTCTTTC 62.491 72.222 12.89 0.00 32.43 2.62
4254 7727 4.162690 CCCGGCCTCTTTCTCCCG 62.163 72.222 0.00 0.00 40.39 5.14
4258 7731 4.760047 GCCTCTTTCTCCCGCGCA 62.760 66.667 8.75 0.00 0.00 6.09
4259 7732 2.187946 CCTCTTTCTCCCGCGCAT 59.812 61.111 8.75 0.00 0.00 4.73
4279 7752 3.443045 CCCTGTCAATGGCGTGGC 61.443 66.667 0.00 0.00 0.00 5.01
4318 8823 8.245491 TGATGACAATGTTTATTCATGACCAAG 58.755 33.333 0.00 0.00 0.00 3.61
4320 8825 8.352137 TGACAATGTTTATTCATGACCAAGAT 57.648 30.769 0.00 0.00 0.00 2.40
4338 8843 5.125900 CCAAGATATTGGATGAAGCAACACA 59.874 40.000 14.13 0.00 44.82 3.72
4339 8844 5.824904 AGATATTGGATGAAGCAACACAC 57.175 39.130 0.00 0.00 0.00 3.82
4346 8851 3.568538 GATGAAGCAACACACCACAATC 58.431 45.455 0.00 0.00 0.00 2.67
4352 8857 1.682854 CAACACACCACAATCTTGGCT 59.317 47.619 0.00 0.00 40.77 4.75
4358 8863 2.102925 CACCACAATCTTGGCTGGTTTT 59.897 45.455 3.22 0.00 40.77 2.43
4359 8864 3.320541 CACCACAATCTTGGCTGGTTTTA 59.679 43.478 3.22 0.00 40.77 1.52
4365 8870 5.539955 ACAATCTTGGCTGGTTTTAGTTCAT 59.460 36.000 0.00 0.00 0.00 2.57
4367 8872 7.094205 ACAATCTTGGCTGGTTTTAGTTCATAG 60.094 37.037 0.00 0.00 0.00 2.23
4369 8874 5.938125 TCTTGGCTGGTTTTAGTTCATAGAC 59.062 40.000 0.00 0.00 0.00 2.59
4370 8875 5.235850 TGGCTGGTTTTAGTTCATAGACA 57.764 39.130 0.00 0.00 0.00 3.41
4372 8877 5.647658 TGGCTGGTTTTAGTTCATAGACATG 59.352 40.000 0.00 0.00 0.00 3.21
4374 8879 6.151144 GGCTGGTTTTAGTTCATAGACATGTT 59.849 38.462 0.00 0.00 33.57 2.71
4376 8881 7.750903 GCTGGTTTTAGTTCATAGACATGTTTC 59.249 37.037 0.00 0.00 33.57 2.78
4377 8882 8.106247 TGGTTTTAGTTCATAGACATGTTTCC 57.894 34.615 0.00 0.00 33.57 3.13
4378 8883 7.942341 TGGTTTTAGTTCATAGACATGTTTCCT 59.058 33.333 0.00 0.00 33.57 3.36
4379 8884 9.444600 GGTTTTAGTTCATAGACATGTTTCCTA 57.555 33.333 0.00 0.00 33.57 2.94
4391 8994 8.887264 AGACATGTTTCCTATATACTCCCTAG 57.113 38.462 0.00 0.00 0.00 3.02
4395 8998 8.532819 CATGTTTCCTATATACTCCCTAGGTTC 58.467 40.741 8.29 0.00 34.77 3.62
4396 8999 7.834046 TGTTTCCTATATACTCCCTAGGTTCT 58.166 38.462 8.29 0.00 34.77 3.01
4397 9000 7.949006 TGTTTCCTATATACTCCCTAGGTTCTC 59.051 40.741 8.29 0.00 34.77 2.87
4398 9001 7.908492 TTCCTATATACTCCCTAGGTTCTCT 57.092 40.000 8.29 0.00 34.77 3.10
4409 9012 8.172070 ACTCCCTAGGTTCTCTAATATAAGACC 58.828 40.741 8.29 0.00 0.00 3.85
4410 9013 8.065385 TCCCTAGGTTCTCTAATATAAGACCA 57.935 38.462 8.29 0.00 0.00 4.02
4430 9033 7.593825 AGACCATTTACCTTTTTCTTGATTCG 58.406 34.615 0.00 0.00 0.00 3.34
4433 9036 9.020731 ACCATTTACCTTTTTCTTGATTCGTAT 57.979 29.630 0.00 0.00 0.00 3.06
4434 9037 9.289303 CCATTTACCTTTTTCTTGATTCGTATG 57.711 33.333 0.00 0.00 0.00 2.39
4435 9038 9.840427 CATTTACCTTTTTCTTGATTCGTATGT 57.160 29.630 0.00 0.00 0.00 2.29
4446 9049 9.731819 TTCTTGATTCGTATGTATCTTAGACAC 57.268 33.333 3.57 0.00 0.00 3.67
4541 9155 3.966665 TGGCATTTTTCAGAAAAGTCCCT 59.033 39.130 11.37 0.00 38.09 4.20
4542 9156 4.039124 TGGCATTTTTCAGAAAAGTCCCTC 59.961 41.667 11.37 2.33 38.09 4.30
4543 9157 4.281941 GGCATTTTTCAGAAAAGTCCCTCT 59.718 41.667 8.34 0.00 38.09 3.69
4544 9158 5.476945 GGCATTTTTCAGAAAAGTCCCTCTA 59.523 40.000 8.34 0.00 38.09 2.43
4545 9159 6.153510 GGCATTTTTCAGAAAAGTCCCTCTAT 59.846 38.462 8.34 0.00 38.09 1.98
4546 9160 7.310052 GGCATTTTTCAGAAAAGTCCCTCTATT 60.310 37.037 8.34 0.00 38.09 1.73
4547 9161 8.090831 GCATTTTTCAGAAAAGTCCCTCTATTT 58.909 33.333 8.34 0.00 38.09 1.40
4548 9162 9.987272 CATTTTTCAGAAAAGTCCCTCTATTTT 57.013 29.630 8.34 0.00 38.09 1.82
4567 9181 8.755977 TCTATTTTAGAGAATTCAACCCGTAGT 58.244 33.333 8.44 0.00 0.00 2.73
4568 9182 7.845066 ATTTTAGAGAATTCAACCCGTAGTC 57.155 36.000 8.44 0.00 0.00 2.59
4569 9183 3.889520 AGAGAATTCAACCCGTAGTCC 57.110 47.619 8.44 0.00 0.00 3.85
4570 9184 3.442076 AGAGAATTCAACCCGTAGTCCT 58.558 45.455 8.44 0.00 0.00 3.85
4571 9185 3.195825 AGAGAATTCAACCCGTAGTCCTG 59.804 47.826 8.44 0.00 0.00 3.86
4572 9186 2.904434 AGAATTCAACCCGTAGTCCTGT 59.096 45.455 8.44 0.00 0.00 4.00
4573 9187 3.326880 AGAATTCAACCCGTAGTCCTGTT 59.673 43.478 8.44 0.00 0.00 3.16
4574 9188 3.782656 ATTCAACCCGTAGTCCTGTTT 57.217 42.857 0.00 0.00 0.00 2.83
4575 9189 3.564053 TTCAACCCGTAGTCCTGTTTT 57.436 42.857 0.00 0.00 0.00 2.43
4576 9190 4.686191 TTCAACCCGTAGTCCTGTTTTA 57.314 40.909 0.00 0.00 0.00 1.52
4577 9191 4.686191 TCAACCCGTAGTCCTGTTTTAA 57.314 40.909 0.00 0.00 0.00 1.52
4578 9192 4.634199 TCAACCCGTAGTCCTGTTTTAAG 58.366 43.478 0.00 0.00 0.00 1.85
4579 9193 4.101430 TCAACCCGTAGTCCTGTTTTAAGT 59.899 41.667 0.00 0.00 0.00 2.24
4580 9194 4.694760 ACCCGTAGTCCTGTTTTAAGTT 57.305 40.909 0.00 0.00 0.00 2.66
4581 9195 5.806654 ACCCGTAGTCCTGTTTTAAGTTA 57.193 39.130 0.00 0.00 0.00 2.24
4582 9196 6.173427 ACCCGTAGTCCTGTTTTAAGTTAA 57.827 37.500 0.00 0.00 0.00 2.01
4583 9197 6.591001 ACCCGTAGTCCTGTTTTAAGTTAAA 58.409 36.000 3.88 3.88 0.00 1.52
4584 9198 7.053498 ACCCGTAGTCCTGTTTTAAGTTAAAA 58.947 34.615 15.29 15.29 35.45 1.52
4669 9444 6.088085 CGTCCAGATTTAAGTCAAACAAATGC 59.912 38.462 0.44 0.00 0.00 3.56
5121 9901 1.247567 ATGTCGCAGGGGAAAACAAG 58.752 50.000 0.00 0.00 0.00 3.16
5123 9903 1.314730 GTCGCAGGGGAAAACAAGAA 58.685 50.000 0.00 0.00 0.00 2.52
5345 10167 4.212214 GTCTTGAGTGATGGTTGTTGAGTC 59.788 45.833 0.00 0.00 0.00 3.36
5352 10174 2.708216 TGGTTGTTGAGTCAAGAGCA 57.292 45.000 16.79 15.29 0.00 4.26
5403 10225 2.609459 CACGGGCTCTTTTGCTAGTATG 59.391 50.000 0.00 0.00 0.00 2.39
5408 10230 5.864474 CGGGCTCTTTTGCTAGTATGTATAG 59.136 44.000 0.00 0.00 0.00 1.31
5409 10231 5.639931 GGGCTCTTTTGCTAGTATGTATAGC 59.360 44.000 0.00 0.00 44.81 2.97
5440 10262 5.912103 TCTTATATTAGGGAACGGAGGGAT 58.088 41.667 0.00 0.00 0.00 3.85
5444 10266 2.393630 TAGGGAACGGAGGGATTAGG 57.606 55.000 0.00 0.00 0.00 2.69
5445 10267 0.342313 AGGGAACGGAGGGATTAGGT 59.658 55.000 0.00 0.00 0.00 3.08
5446 10268 1.210538 GGGAACGGAGGGATTAGGTT 58.789 55.000 0.00 0.00 0.00 3.50
5447 10269 1.134189 GGGAACGGAGGGATTAGGTTG 60.134 57.143 0.00 0.00 0.00 3.77
5448 10270 1.558294 GGAACGGAGGGATTAGGTTGT 59.442 52.381 0.00 0.00 0.00 3.32
5449 10271 2.026542 GGAACGGAGGGATTAGGTTGTT 60.027 50.000 0.00 0.00 0.00 2.83
5450 10272 3.560668 GGAACGGAGGGATTAGGTTGTTT 60.561 47.826 0.00 0.00 0.00 2.83
5451 10273 4.323715 GGAACGGAGGGATTAGGTTGTTTA 60.324 45.833 0.00 0.00 0.00 2.01
5452 10274 4.914177 ACGGAGGGATTAGGTTGTTTAA 57.086 40.909 0.00 0.00 0.00 1.52
5453 10275 5.446260 ACGGAGGGATTAGGTTGTTTAAT 57.554 39.130 0.00 0.00 0.00 1.40
5454 10276 5.434408 ACGGAGGGATTAGGTTGTTTAATC 58.566 41.667 0.00 0.00 36.99 1.75
5463 10285 8.914011 GGATTAGGTTGTTTAATCCTTAGCAAT 58.086 33.333 13.97 0.00 46.84 3.56
5467 10289 7.312899 AGGTTGTTTAATCCTTAGCAATTTCG 58.687 34.615 0.00 0.00 0.00 3.46
5468 10290 7.175990 AGGTTGTTTAATCCTTAGCAATTTCGA 59.824 33.333 0.00 0.00 0.00 3.71
5471 10293 8.909708 TGTTTAATCCTTAGCAATTTCGATTG 57.090 30.769 0.00 0.00 34.79 2.67
5472 10294 8.735315 TGTTTAATCCTTAGCAATTTCGATTGA 58.265 29.630 2.94 0.00 33.55 2.57
5473 10295 9.736023 GTTTAATCCTTAGCAATTTCGATTGAT 57.264 29.630 2.94 0.00 33.55 2.57
5474 10296 9.950680 TTTAATCCTTAGCAATTTCGATTGATC 57.049 29.630 2.94 0.00 33.55 2.92
5475 10297 6.566197 ATCCTTAGCAATTTCGATTGATCC 57.434 37.500 2.94 0.00 33.55 3.36
5476 10298 5.436175 TCCTTAGCAATTTCGATTGATCCA 58.564 37.500 2.94 0.00 33.55 3.41
5477 10299 6.064060 TCCTTAGCAATTTCGATTGATCCAT 58.936 36.000 2.94 0.00 33.55 3.41
5478 10300 7.223584 TCCTTAGCAATTTCGATTGATCCATA 58.776 34.615 2.94 0.00 33.55 2.74
5479 10301 7.173218 TCCTTAGCAATTTCGATTGATCCATAC 59.827 37.037 2.94 0.00 33.55 2.39
5480 10302 7.041167 CCTTAGCAATTTCGATTGATCCATACA 60.041 37.037 2.94 0.00 33.55 2.29
5481 10303 6.889301 AGCAATTTCGATTGATCCATACAT 57.111 33.333 2.94 0.00 33.55 2.29
5482 10304 7.281040 AGCAATTTCGATTGATCCATACATT 57.719 32.000 2.94 0.00 33.55 2.71
5483 10305 7.719483 AGCAATTTCGATTGATCCATACATTT 58.281 30.769 2.94 0.00 33.55 2.32
5484 10306 8.199449 AGCAATTTCGATTGATCCATACATTTT 58.801 29.630 2.94 0.00 33.55 1.82
5485 10307 8.270799 GCAATTTCGATTGATCCATACATTTTG 58.729 33.333 2.94 0.00 33.55 2.44
5486 10308 9.304731 CAATTTCGATTGATCCATACATTTTGT 57.695 29.630 0.00 0.00 33.55 2.83
5659 10542 5.630061 TCACATTAAACGTGCAATGATCTG 58.370 37.500 22.40 13.64 36.00 2.90
5661 10544 4.699735 ACATTAAACGTGCAATGATCTGGA 59.300 37.500 22.40 0.00 36.00 3.86
5971 10854 2.158755 CCCACCTTACCATGGATCACTC 60.159 54.545 21.47 0.00 38.34 3.51
6001 10884 4.680110 CAGGTACGTTACAGTTGTTCTGAG 59.320 45.833 0.00 0.00 46.27 3.35
6343 11226 2.805353 CTGTCCGTCGCCAAGTCG 60.805 66.667 0.00 0.00 0.00 4.18
6792 11675 2.535331 GAGACTGCTACTGTTGCTAGC 58.465 52.381 8.10 8.10 37.68 3.42
6793 11676 2.165437 GAGACTGCTACTGTTGCTAGCT 59.835 50.000 17.23 8.84 37.98 3.32
6819 11702 2.270205 CATGCTTGGACCGGAGCT 59.730 61.111 9.46 0.00 39.60 4.09
6820 11703 2.110967 CATGCTTGGACCGGAGCTG 61.111 63.158 9.46 3.26 39.60 4.24
6821 11704 3.984193 ATGCTTGGACCGGAGCTGC 62.984 63.158 9.46 6.35 39.60 5.25
6822 11705 4.400961 GCTTGGACCGGAGCTGCT 62.401 66.667 9.46 0.00 36.01 4.24
6823 11706 2.348998 CTTGGACCGGAGCTGCTT 59.651 61.111 9.46 0.00 0.00 3.91
6824 11707 2.032528 TTGGACCGGAGCTGCTTG 59.967 61.111 9.46 0.00 0.00 4.01
6825 11708 4.704833 TGGACCGGAGCTGCTTGC 62.705 66.667 9.46 0.00 43.29 4.01
6890 11785 8.583765 GTGTCGTGAAATAAAATAAAATGGCTC 58.416 33.333 0.00 0.00 0.00 4.70
6914 11809 5.664457 TGCAGACTGATTTCTATCGTGAAT 58.336 37.500 6.65 0.00 33.23 2.57
6940 11835 0.601057 TGTCAGGAATCGTTCGAGCA 59.399 50.000 0.00 0.00 0.00 4.26
6968 11863 2.416836 CCGATAACAAGCCGTTCTCTCA 60.417 50.000 0.00 0.00 39.14 3.27
6970 11865 2.060326 TAACAAGCCGTTCTCTCACG 57.940 50.000 0.00 0.00 39.14 4.35
6976 11871 1.627550 GCCGTTCTCTCACGCTTTCC 61.628 60.000 0.00 0.00 38.93 3.13
6978 11873 1.673033 CCGTTCTCTCACGCTTTCCAT 60.673 52.381 0.00 0.00 38.93 3.41
7036 11934 6.249050 CACAATCGTATGCACAATAACACAAG 59.751 38.462 0.00 0.00 0.00 3.16
7037 11935 6.148645 ACAATCGTATGCACAATAACACAAGA 59.851 34.615 0.00 0.00 0.00 3.02
7039 11937 5.922546 TCGTATGCACAATAACACAAGAAC 58.077 37.500 0.00 0.00 0.00 3.01
7040 11938 5.467063 TCGTATGCACAATAACACAAGAACA 59.533 36.000 0.00 0.00 0.00 3.18
7041 11939 5.563751 CGTATGCACAATAACACAAGAACAC 59.436 40.000 0.00 0.00 0.00 3.32
7042 11940 4.300189 TGCACAATAACACAAGAACACC 57.700 40.909 0.00 0.00 0.00 4.16
7045 11946 5.532779 TGCACAATAACACAAGAACACCATA 59.467 36.000 0.00 0.00 0.00 2.74
7105 12009 1.135257 CCGCGCCCATTTATTTTGACA 60.135 47.619 0.00 0.00 0.00 3.58
7108 12012 3.000122 CGCGCCCATTTATTTTGACAATG 60.000 43.478 0.00 0.00 0.00 2.82
7144 12048 8.880991 AGTCGGTGTAAATATATAGAGGACAT 57.119 34.615 0.00 0.00 0.00 3.06
7222 12126 4.037565 CCTCTATTTATTTTTGGACCGGCC 59.962 45.833 0.00 4.32 37.10 6.13
7299 12203 6.460781 ACTCATACGTATTTCACAAGGAACA 58.539 36.000 5.03 0.00 34.56 3.18
7365 12270 8.462143 TTTGTATATAAGCGTAGATAAGCAGC 57.538 34.615 0.00 0.00 35.48 5.25
7559 12489 5.414144 TGGAAAAAGGCAAAAAGAAAGGTTG 59.586 36.000 0.00 0.00 0.00 3.77
7639 12574 4.196778 TTGAAGCGGCACACCCCA 62.197 61.111 1.45 0.00 0.00 4.96
7676 12611 6.377996 TCAAATATACCATGCAGCAACTTTCT 59.622 34.615 0.00 0.00 0.00 2.52
7680 12624 2.295349 ACCATGCAGCAACTTTCTTGAG 59.705 45.455 0.00 0.00 0.00 3.02
7706 12680 6.624352 TTCCTCAGACAATCAACAGAAAAG 57.376 37.500 0.00 0.00 0.00 2.27
7725 12699 6.380274 AGAAAAGGGAACGATCAGTAGTATGA 59.620 38.462 0.00 0.00 0.00 2.15
7726 12700 6.732896 AAAGGGAACGATCAGTAGTATGAT 57.267 37.500 0.00 0.00 42.62 2.45
7764 12738 6.653020 AGCAAGGGAAAAACAAAATCTCTTT 58.347 32.000 0.00 0.00 31.62 2.52
7765 12739 6.763135 AGCAAGGGAAAAACAAAATCTCTTTC 59.237 34.615 0.00 0.00 31.62 2.62
7766 12740 6.538381 GCAAGGGAAAAACAAAATCTCTTTCA 59.462 34.615 0.00 0.00 31.62 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 3.096092 CCTCCTTGCTTCTAGTCTCACT 58.904 50.000 0.00 0.00 0.00 3.41
3 4 2.418060 GCCTCCTTGCTTCTAGTCTCAC 60.418 54.545 0.00 0.00 0.00 3.51
5 6 1.138069 GGCCTCCTTGCTTCTAGTCTC 59.862 57.143 0.00 0.00 0.00 3.36
6 7 1.199615 GGCCTCCTTGCTTCTAGTCT 58.800 55.000 0.00 0.00 0.00 3.24
7 8 0.179097 CGGCCTCCTTGCTTCTAGTC 60.179 60.000 0.00 0.00 0.00 2.59
8 9 0.905337 ACGGCCTCCTTGCTTCTAGT 60.905 55.000 0.00 0.00 0.00 2.57
9 10 0.460987 CACGGCCTCCTTGCTTCTAG 60.461 60.000 0.00 0.00 0.00 2.43
10 11 0.902984 TCACGGCCTCCTTGCTTCTA 60.903 55.000 0.00 0.00 0.00 2.10
11 12 1.768684 TTCACGGCCTCCTTGCTTCT 61.769 55.000 0.00 0.00 0.00 2.85
12 13 1.301677 CTTCACGGCCTCCTTGCTTC 61.302 60.000 0.00 0.00 0.00 3.86
13 14 1.302832 CTTCACGGCCTCCTTGCTT 60.303 57.895 0.00 0.00 0.00 3.91
14 15 2.348998 CTTCACGGCCTCCTTGCT 59.651 61.111 0.00 0.00 0.00 3.91
15 16 2.032681 ACTTCACGGCCTCCTTGC 59.967 61.111 0.00 0.00 0.00 4.01
16 17 0.535102 AACACTTCACGGCCTCCTTG 60.535 55.000 0.00 0.00 0.00 3.61
17 18 1.053424 TAACACTTCACGGCCTCCTT 58.947 50.000 0.00 0.00 0.00 3.36
18 19 1.276622 ATAACACTTCACGGCCTCCT 58.723 50.000 0.00 0.00 0.00 3.69
19 20 2.547826 GTATAACACTTCACGGCCTCC 58.452 52.381 0.00 0.00 0.00 4.30
20 21 2.547826 GGTATAACACTTCACGGCCTC 58.452 52.381 0.00 0.00 0.00 4.70
21 22 1.134907 CGGTATAACACTTCACGGCCT 60.135 52.381 0.00 0.00 0.00 5.19
22 23 1.135024 TCGGTATAACACTTCACGGCC 60.135 52.381 0.00 0.00 0.00 6.13
23 24 2.282701 TCGGTATAACACTTCACGGC 57.717 50.000 0.00 0.00 0.00 5.68
24 25 4.741676 GGTATTCGGTATAACACTTCACGG 59.258 45.833 0.00 0.00 0.00 4.94
25 26 4.438797 CGGTATTCGGTATAACACTTCACG 59.561 45.833 0.00 0.00 34.75 4.35
26 27 5.878261 CGGTATTCGGTATAACACTTCAC 57.122 43.478 0.00 0.00 34.75 3.18
40 41 5.751509 TGAATCTTATTGTCACCGGTATTCG 59.248 40.000 6.87 0.00 38.88 3.34
41 42 6.761714 ACTGAATCTTATTGTCACCGGTATTC 59.238 38.462 6.87 10.38 0.00 1.75
42 43 6.650120 ACTGAATCTTATTGTCACCGGTATT 58.350 36.000 6.87 0.00 0.00 1.89
43 44 6.235231 ACTGAATCTTATTGTCACCGGTAT 57.765 37.500 6.87 0.00 0.00 2.73
44 45 5.670792 ACTGAATCTTATTGTCACCGGTA 57.329 39.130 6.87 0.00 0.00 4.02
45 46 4.553330 ACTGAATCTTATTGTCACCGGT 57.447 40.909 0.00 0.00 0.00 5.28
46 47 5.050490 CCTACTGAATCTTATTGTCACCGG 58.950 45.833 0.00 0.00 0.00 5.28
47 48 5.050490 CCCTACTGAATCTTATTGTCACCG 58.950 45.833 0.00 0.00 0.00 4.94
48 49 5.990668 ACCCTACTGAATCTTATTGTCACC 58.009 41.667 0.00 0.00 0.00 4.02
49 50 8.038944 TGTTACCCTACTGAATCTTATTGTCAC 58.961 37.037 0.00 0.00 0.00 3.67
50 51 8.141298 TGTTACCCTACTGAATCTTATTGTCA 57.859 34.615 0.00 0.00 0.00 3.58
51 52 9.046296 CATGTTACCCTACTGAATCTTATTGTC 57.954 37.037 0.00 0.00 0.00 3.18
52 53 7.993183 CCATGTTACCCTACTGAATCTTATTGT 59.007 37.037 0.00 0.00 0.00 2.71
53 54 8.210946 TCCATGTTACCCTACTGAATCTTATTG 58.789 37.037 0.00 0.00 0.00 1.90
54 55 8.331931 TCCATGTTACCCTACTGAATCTTATT 57.668 34.615 0.00 0.00 0.00 1.40
55 56 7.931015 TCCATGTTACCCTACTGAATCTTAT 57.069 36.000 0.00 0.00 0.00 1.73
56 57 7.567250 TGATCCATGTTACCCTACTGAATCTTA 59.433 37.037 0.00 0.00 0.00 2.10
57 58 6.386927 TGATCCATGTTACCCTACTGAATCTT 59.613 38.462 0.00 0.00 0.00 2.40
58 59 5.905331 TGATCCATGTTACCCTACTGAATCT 59.095 40.000 0.00 0.00 0.00 2.40
59 60 6.174720 TGATCCATGTTACCCTACTGAATC 57.825 41.667 0.00 0.00 0.00 2.52
60 61 6.770286 ATGATCCATGTTACCCTACTGAAT 57.230 37.500 0.00 0.00 0.00 2.57
61 62 7.872061 ATATGATCCATGTTACCCTACTGAA 57.128 36.000 0.00 0.00 0.00 3.02
62 63 7.482169 GATATGATCCATGTTACCCTACTGA 57.518 40.000 0.00 0.00 0.00 3.41
86 87 7.282585 TGATTACACCTCATTTATCCTCAAGG 58.717 38.462 0.00 0.00 0.00 3.61
87 88 8.915057 ATGATTACACCTCATTTATCCTCAAG 57.085 34.615 0.00 0.00 28.98 3.02
88 89 8.493607 TGATGATTACACCTCATTTATCCTCAA 58.506 33.333 0.00 0.00 33.56 3.02
89 90 8.033178 TGATGATTACACCTCATTTATCCTCA 57.967 34.615 0.00 0.00 33.56 3.86
90 91 8.908786 TTGATGATTACACCTCATTTATCCTC 57.091 34.615 0.00 0.00 33.56 3.71
91 92 9.125026 GTTTGATGATTACACCTCATTTATCCT 57.875 33.333 0.00 0.00 33.56 3.24
92 93 8.070171 CGTTTGATGATTACACCTCATTTATCC 58.930 37.037 0.00 0.00 33.56 2.59
93 94 7.587757 GCGTTTGATGATTACACCTCATTTATC 59.412 37.037 0.00 0.00 33.56 1.75
94 95 7.417612 GCGTTTGATGATTACACCTCATTTAT 58.582 34.615 0.00 0.00 33.56 1.40
95 96 6.183360 GGCGTTTGATGATTACACCTCATTTA 60.183 38.462 0.00 0.00 33.56 1.40
96 97 5.393027 GGCGTTTGATGATTACACCTCATTT 60.393 40.000 0.00 0.00 33.56 2.32
97 98 4.096382 GGCGTTTGATGATTACACCTCATT 59.904 41.667 0.00 0.00 33.56 2.57
98 99 3.627577 GGCGTTTGATGATTACACCTCAT 59.372 43.478 0.00 0.00 36.07 2.90
99 100 3.006940 GGCGTTTGATGATTACACCTCA 58.993 45.455 0.00 0.00 0.00 3.86
100 101 2.030457 CGGCGTTTGATGATTACACCTC 59.970 50.000 0.00 0.00 0.00 3.85
101 102 2.006888 CGGCGTTTGATGATTACACCT 58.993 47.619 0.00 0.00 0.00 4.00
102 103 2.004017 TCGGCGTTTGATGATTACACC 58.996 47.619 6.85 0.00 0.00 4.16
103 104 3.733024 TTCGGCGTTTGATGATTACAC 57.267 42.857 6.85 0.00 0.00 2.90
104 105 3.425625 GCTTTCGGCGTTTGATGATTACA 60.426 43.478 6.85 0.00 0.00 2.41
105 106 3.098636 GCTTTCGGCGTTTGATGATTAC 58.901 45.455 6.85 0.00 0.00 1.89
106 107 3.398954 GCTTTCGGCGTTTGATGATTA 57.601 42.857 6.85 0.00 0.00 1.75
107 108 2.262572 GCTTTCGGCGTTTGATGATT 57.737 45.000 6.85 0.00 0.00 2.57
108 109 3.996825 GCTTTCGGCGTTTGATGAT 57.003 47.368 6.85 0.00 0.00 2.45
117 118 8.367720 ATGAAATCATACAAGAGCTTTCGGCG 62.368 42.308 0.00 0.00 39.44 6.46
118 119 4.094887 TGAAATCATACAAGAGCTTTCGGC 59.905 41.667 0.00 0.00 42.19 5.54
119 120 5.801350 TGAAATCATACAAGAGCTTTCGG 57.199 39.130 0.00 0.00 0.00 4.30
120 121 7.246311 ACAATGAAATCATACAAGAGCTTTCG 58.754 34.615 0.00 0.00 35.10 3.46
121 122 8.239314 TGACAATGAAATCATACAAGAGCTTTC 58.761 33.333 0.00 0.00 35.10 2.62
122 123 8.114331 TGACAATGAAATCATACAAGAGCTTT 57.886 30.769 0.00 0.00 35.10 3.51
123 124 7.692460 TGACAATGAAATCATACAAGAGCTT 57.308 32.000 0.00 0.00 35.10 3.74
124 125 7.876936 ATGACAATGAAATCATACAAGAGCT 57.123 32.000 0.00 0.00 35.10 4.09
152 153 9.507280 CAGTACGAAAATTAATTTCATGAGCAT 57.493 29.630 13.68 0.00 46.42 3.79
153 154 8.511321 ACAGTACGAAAATTAATTTCATGAGCA 58.489 29.630 13.68 0.00 46.42 4.26
154 155 8.895932 ACAGTACGAAAATTAATTTCATGAGC 57.104 30.769 13.68 4.17 46.42 4.26
220 221 8.869109 TCAAACCATCCAGAGTTTAATCAATTT 58.131 29.630 0.00 0.00 34.52 1.82
221 222 8.306761 GTCAAACCATCCAGAGTTTAATCAATT 58.693 33.333 0.00 0.00 34.52 2.32
222 223 7.451255 TGTCAAACCATCCAGAGTTTAATCAAT 59.549 33.333 0.00 0.00 34.52 2.57
223 224 6.775142 TGTCAAACCATCCAGAGTTTAATCAA 59.225 34.615 0.00 0.00 34.52 2.57
224 225 6.303054 TGTCAAACCATCCAGAGTTTAATCA 58.697 36.000 0.00 0.00 34.52 2.57
225 226 6.817765 TGTCAAACCATCCAGAGTTTAATC 57.182 37.500 0.00 0.00 34.52 1.75
226 227 7.451255 TCAATGTCAAACCATCCAGAGTTTAAT 59.549 33.333 0.00 0.00 34.52 1.40
227 228 6.775142 TCAATGTCAAACCATCCAGAGTTTAA 59.225 34.615 0.00 0.00 34.52 1.52
228 229 6.303054 TCAATGTCAAACCATCCAGAGTTTA 58.697 36.000 0.00 0.00 34.52 2.01
229 230 5.139727 TCAATGTCAAACCATCCAGAGTTT 58.860 37.500 0.00 0.00 36.65 2.66
230 231 4.728772 TCAATGTCAAACCATCCAGAGTT 58.271 39.130 0.00 0.00 0.00 3.01
231 232 4.371624 TCAATGTCAAACCATCCAGAGT 57.628 40.909 0.00 0.00 0.00 3.24
232 233 4.520111 TGTTCAATGTCAAACCATCCAGAG 59.480 41.667 0.00 0.00 0.00 3.35
233 234 4.468713 TGTTCAATGTCAAACCATCCAGA 58.531 39.130 0.00 0.00 0.00 3.86
234 235 4.852134 TGTTCAATGTCAAACCATCCAG 57.148 40.909 0.00 0.00 0.00 3.86
235 236 6.891361 AGATATGTTCAATGTCAAACCATCCA 59.109 34.615 0.00 0.00 0.00 3.41
236 237 7.338800 AGATATGTTCAATGTCAAACCATCC 57.661 36.000 0.00 0.00 0.00 3.51
262 263 9.853177 CTCAGTTTTCTTTTACTCCCCATATAT 57.147 33.333 0.00 0.00 0.00 0.86
263 264 8.272173 CCTCAGTTTTCTTTTACTCCCCATATA 58.728 37.037 0.00 0.00 0.00 0.86
264 265 7.036863 TCCTCAGTTTTCTTTTACTCCCCATAT 60.037 37.037 0.00 0.00 0.00 1.78
265 266 6.273730 TCCTCAGTTTTCTTTTACTCCCCATA 59.726 38.462 0.00 0.00 0.00 2.74
266 267 5.074515 TCCTCAGTTTTCTTTTACTCCCCAT 59.925 40.000 0.00 0.00 0.00 4.00
267 268 4.414182 TCCTCAGTTTTCTTTTACTCCCCA 59.586 41.667 0.00 0.00 0.00 4.96
268 269 4.981812 TCCTCAGTTTTCTTTTACTCCCC 58.018 43.478 0.00 0.00 0.00 4.81
269 270 5.622180 ACTCCTCAGTTTTCTTTTACTCCC 58.378 41.667 0.00 0.00 0.00 4.30
270 271 7.443477 AGTACTCCTCAGTTTTCTTTTACTCC 58.557 38.462 0.00 0.00 33.62 3.85
271 272 8.890124 AAGTACTCCTCAGTTTTCTTTTACTC 57.110 34.615 0.00 0.00 33.62 2.59
272 273 9.110502 CAAAGTACTCCTCAGTTTTCTTTTACT 57.889 33.333 0.00 0.00 33.62 2.24
273 274 7.856398 GCAAAGTACTCCTCAGTTTTCTTTTAC 59.144 37.037 0.00 0.00 33.62 2.01
274 275 7.554835 TGCAAAGTACTCCTCAGTTTTCTTTTA 59.445 33.333 0.00 0.00 33.62 1.52
275 276 6.377146 TGCAAAGTACTCCTCAGTTTTCTTTT 59.623 34.615 0.00 0.00 33.62 2.27
276 277 5.885912 TGCAAAGTACTCCTCAGTTTTCTTT 59.114 36.000 0.00 0.00 33.62 2.52
277 278 5.437060 TGCAAAGTACTCCTCAGTTTTCTT 58.563 37.500 0.00 0.00 33.62 2.52
278 279 5.036117 TGCAAAGTACTCCTCAGTTTTCT 57.964 39.130 0.00 0.00 33.62 2.52
279 280 5.050023 GTCTGCAAAGTACTCCTCAGTTTTC 60.050 44.000 14.11 0.00 33.62 2.29
280 281 4.816925 GTCTGCAAAGTACTCCTCAGTTTT 59.183 41.667 14.11 0.00 33.62 2.43
281 282 4.141711 TGTCTGCAAAGTACTCCTCAGTTT 60.142 41.667 14.11 0.00 33.62 2.66
282 283 3.388024 TGTCTGCAAAGTACTCCTCAGTT 59.612 43.478 14.11 0.00 33.62 3.16
283 284 2.965831 TGTCTGCAAAGTACTCCTCAGT 59.034 45.455 14.11 0.00 36.55 3.41
284 285 3.667497 TGTCTGCAAAGTACTCCTCAG 57.333 47.619 0.00 3.96 0.00 3.35
285 286 4.040339 TCATTGTCTGCAAAGTACTCCTCA 59.960 41.667 0.00 0.00 38.21 3.86
286 287 4.390297 GTCATTGTCTGCAAAGTACTCCTC 59.610 45.833 0.00 0.00 38.21 3.71
287 288 4.202357 TGTCATTGTCTGCAAAGTACTCCT 60.202 41.667 0.00 0.00 38.21 3.69
288 289 4.065088 TGTCATTGTCTGCAAAGTACTCC 58.935 43.478 0.00 0.00 38.21 3.85
289 290 5.391310 CCATGTCATTGTCTGCAAAGTACTC 60.391 44.000 0.00 0.00 38.21 2.59
290 291 4.456911 CCATGTCATTGTCTGCAAAGTACT 59.543 41.667 0.00 0.00 38.21 2.73
291 292 4.216257 ACCATGTCATTGTCTGCAAAGTAC 59.784 41.667 0.00 0.00 38.21 2.73
294 295 3.005050 ACACCATGTCATTGTCTGCAAAG 59.995 43.478 0.00 0.00 38.21 2.77
299 300 5.469760 TCACTAAACACCATGTCATTGTCTG 59.530 40.000 0.00 0.00 0.00 3.51
317 318 0.690762 AGGCCCGAGCTTTTCACTAA 59.309 50.000 0.00 0.00 39.73 2.24
318 319 0.036388 CAGGCCCGAGCTTTTCACTA 60.036 55.000 0.00 0.00 39.73 2.74
362 363 1.983119 TTTGATAGGAGCCGGCCAGG 61.983 60.000 26.15 6.38 44.97 4.45
367 383 2.420022 CACACTTTTTGATAGGAGCCGG 59.580 50.000 0.00 0.00 0.00 6.13
391 407 2.024273 ACGGAAAGAGTAGATGGGAGGA 60.024 50.000 0.00 0.00 0.00 3.71
395 411 2.500098 TGGAACGGAAAGAGTAGATGGG 59.500 50.000 0.00 0.00 0.00 4.00
397 413 6.743575 ATTTTGGAACGGAAAGAGTAGATG 57.256 37.500 0.00 0.00 0.00 2.90
399 415 7.235935 TCTATTTTGGAACGGAAAGAGTAGA 57.764 36.000 0.00 0.00 30.87 2.59
400 416 7.764443 TCATCTATTTTGGAACGGAAAGAGTAG 59.236 37.037 0.00 0.00 30.87 2.57
401 417 7.548075 GTCATCTATTTTGGAACGGAAAGAGTA 59.452 37.037 0.00 0.00 30.87 2.59
402 418 6.371825 GTCATCTATTTTGGAACGGAAAGAGT 59.628 38.462 0.00 0.00 30.87 3.24
403 419 6.183360 GGTCATCTATTTTGGAACGGAAAGAG 60.183 42.308 0.00 0.00 30.33 2.85
404 420 5.646360 GGTCATCTATTTTGGAACGGAAAGA 59.354 40.000 0.00 0.00 0.00 2.52
405 421 5.163652 GGGTCATCTATTTTGGAACGGAAAG 60.164 44.000 0.00 0.00 0.00 2.62
406 422 4.703093 GGGTCATCTATTTTGGAACGGAAA 59.297 41.667 0.00 0.00 0.00 3.13
408 424 3.264706 TGGGTCATCTATTTTGGAACGGA 59.735 43.478 0.00 0.00 0.00 4.69
411 427 6.590234 AAGTTGGGTCATCTATTTTGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
412 428 6.553100 ACAAAGTTGGGTCATCTATTTTGGAA 59.447 34.615 0.00 0.00 0.00 3.53
413 429 6.074648 ACAAAGTTGGGTCATCTATTTTGGA 58.925 36.000 0.00 0.00 0.00 3.53
414 430 6.345096 ACAAAGTTGGGTCATCTATTTTGG 57.655 37.500 0.00 0.00 0.00 3.28
420 436 8.328758 AGATGATTAACAAAGTTGGGTCATCTA 58.671 33.333 21.34 0.00 45.32 1.98
422 438 7.396540 AGATGATTAACAAAGTTGGGTCATC 57.603 36.000 16.96 16.96 40.40 2.92
424 440 8.877864 AATAGATGATTAACAAAGTTGGGTCA 57.122 30.769 0.00 0.00 0.00 4.02
426 442 9.927668 CAAAATAGATGATTAACAAAGTTGGGT 57.072 29.630 0.00 0.00 0.00 4.51
435 451 8.673711 CCTCCGTTTCAAAATAGATGATTAACA 58.326 33.333 0.00 0.00 0.00 2.41
436 452 8.129211 CCCTCCGTTTCAAAATAGATGATTAAC 58.871 37.037 0.00 0.00 0.00 2.01
437 453 8.050325 TCCCTCCGTTTCAAAATAGATGATTAA 58.950 33.333 0.00 0.00 0.00 1.40
438 454 7.570132 TCCCTCCGTTTCAAAATAGATGATTA 58.430 34.615 0.00 0.00 0.00 1.75
439 455 6.423182 TCCCTCCGTTTCAAAATAGATGATT 58.577 36.000 0.00 0.00 0.00 2.57
440 456 6.001449 TCCCTCCGTTTCAAAATAGATGAT 57.999 37.500 0.00 0.00 0.00 2.45
441 457 5.045869 ACTCCCTCCGTTTCAAAATAGATGA 60.046 40.000 0.00 0.00 0.00 2.92
442 458 5.186198 ACTCCCTCCGTTTCAAAATAGATG 58.814 41.667 0.00 0.00 0.00 2.90
443 459 5.437191 ACTCCCTCCGTTTCAAAATAGAT 57.563 39.130 0.00 0.00 0.00 1.98
444 460 4.903045 ACTCCCTCCGTTTCAAAATAGA 57.097 40.909 0.00 0.00 0.00 1.98
445 461 5.974108 TCTACTCCCTCCGTTTCAAAATAG 58.026 41.667 0.00 0.00 0.00 1.73
446 462 6.211986 TCTTCTACTCCCTCCGTTTCAAAATA 59.788 38.462 0.00 0.00 0.00 1.40
447 463 4.903045 TCTACTCCCTCCGTTTCAAAAT 57.097 40.909 0.00 0.00 0.00 1.82
448 464 4.345837 TCTTCTACTCCCTCCGTTTCAAAA 59.654 41.667 0.00 0.00 0.00 2.44
449 465 3.899360 TCTTCTACTCCCTCCGTTTCAAA 59.101 43.478 0.00 0.00 0.00 2.69
450 466 3.503365 TCTTCTACTCCCTCCGTTTCAA 58.497 45.455 0.00 0.00 0.00 2.69
451 467 3.165087 TCTTCTACTCCCTCCGTTTCA 57.835 47.619 0.00 0.00 0.00 2.69
452 468 4.021280 AGTTTCTTCTACTCCCTCCGTTTC 60.021 45.833 0.00 0.00 0.00 2.78
453 469 3.902467 AGTTTCTTCTACTCCCTCCGTTT 59.098 43.478 0.00 0.00 0.00 3.60
454 470 3.258622 CAGTTTCTTCTACTCCCTCCGTT 59.741 47.826 0.00 0.00 0.00 4.44
455 471 2.826725 CAGTTTCTTCTACTCCCTCCGT 59.173 50.000 0.00 0.00 0.00 4.69
456 472 2.826725 ACAGTTTCTTCTACTCCCTCCG 59.173 50.000 0.00 0.00 0.00 4.63
457 473 3.055747 CCACAGTTTCTTCTACTCCCTCC 60.056 52.174 0.00 0.00 0.00 4.30
458 474 3.617775 GCCACAGTTTCTTCTACTCCCTC 60.618 52.174 0.00 0.00 0.00 4.30
459 475 2.303311 GCCACAGTTTCTTCTACTCCCT 59.697 50.000 0.00 0.00 0.00 4.20
460 476 2.615747 GGCCACAGTTTCTTCTACTCCC 60.616 54.545 0.00 0.00 0.00 4.30
461 477 2.038557 TGGCCACAGTTTCTTCTACTCC 59.961 50.000 0.00 0.00 0.00 3.85
462 478 3.402628 TGGCCACAGTTTCTTCTACTC 57.597 47.619 0.00 0.00 0.00 2.59
463 479 3.857157 TTGGCCACAGTTTCTTCTACT 57.143 42.857 3.88 0.00 0.00 2.57
464 480 3.630312 TGTTTGGCCACAGTTTCTTCTAC 59.370 43.478 3.88 0.00 0.00 2.59
543 561 1.933853 GCGTCACAATGGATAGTGGAC 59.066 52.381 0.00 0.00 36.43 4.02
548 566 1.193203 GATGCGCGTCACAATGGATAG 59.807 52.381 24.45 0.00 0.00 2.08
587 605 6.734104 ATTCTTCTTCTTTCCGAATCACAG 57.266 37.500 0.00 0.00 0.00 3.66
645 663 7.391554 AGGACGGCAAGATTATTATAGTACGTA 59.608 37.037 0.00 0.00 0.00 3.57
647 665 6.618811 AGGACGGCAAGATTATTATAGTACG 58.381 40.000 0.00 0.00 0.00 3.67
648 666 7.828712 AGAGGACGGCAAGATTATTATAGTAC 58.171 38.462 0.00 0.00 0.00 2.73
649 667 8.418597 AAGAGGACGGCAAGATTATTATAGTA 57.581 34.615 0.00 0.00 0.00 1.82
650 668 6.919775 AGAGGACGGCAAGATTATTATAGT 57.080 37.500 0.00 0.00 0.00 2.12
662 684 1.600636 CAGGCAAAGAGGACGGCAA 60.601 57.895 0.00 0.00 0.00 4.52
697 719 1.901085 GGTTCGACTCCATCAGCCT 59.099 57.895 0.00 0.00 0.00 4.58
730 752 1.665916 CTGTGACTGTGCGGGTGAG 60.666 63.158 0.00 0.00 0.00 3.51
802 824 9.440773 GAAGGCAATTATTTTTCTTTTGGATCT 57.559 29.630 0.00 0.00 0.00 2.75
947 1012 2.036475 CAGTCACAGGCTCACAGTAAGT 59.964 50.000 0.00 0.00 0.00 2.24
948 1013 2.297315 TCAGTCACAGGCTCACAGTAAG 59.703 50.000 0.00 0.00 0.00 2.34
949 1014 2.297315 CTCAGTCACAGGCTCACAGTAA 59.703 50.000 0.00 0.00 0.00 2.24
950 1015 1.889170 CTCAGTCACAGGCTCACAGTA 59.111 52.381 0.00 0.00 0.00 2.74
1322 1399 3.174799 GCGCAAAGCCGATAAGATAAG 57.825 47.619 0.30 0.00 40.81 1.73
1362 1439 2.010582 CTGAGCTCTCCTGCCGGTAC 62.011 65.000 16.19 0.00 0.00 3.34
1363 1440 1.754621 CTGAGCTCTCCTGCCGGTA 60.755 63.158 16.19 0.00 0.00 4.02
1364 1441 2.870035 ATCTGAGCTCTCCTGCCGGT 62.870 60.000 16.19 0.00 0.00 5.28
1365 1442 1.684386 AATCTGAGCTCTCCTGCCGG 61.684 60.000 16.19 0.00 0.00 6.13
1366 1443 0.177604 AAATCTGAGCTCTCCTGCCG 59.822 55.000 16.19 0.00 0.00 5.69
1368 1445 3.866651 TGTTAAATCTGAGCTCTCCTGC 58.133 45.455 16.19 0.00 0.00 4.85
1369 1446 8.557864 CAATTATGTTAAATCTGAGCTCTCCTG 58.442 37.037 16.19 2.92 0.00 3.86
1390 1467 9.602568 TCAGTTAGCATTACCGTAAATCAATTA 57.397 29.630 0.00 0.00 0.00 1.40
1395 1472 5.745294 TCGTCAGTTAGCATTACCGTAAATC 59.255 40.000 0.00 0.00 0.00 2.17
1401 1478 3.863424 ACATTCGTCAGTTAGCATTACCG 59.137 43.478 0.00 0.00 0.00 4.02
1403 1480 5.581085 AGGAACATTCGTCAGTTAGCATTAC 59.419 40.000 0.00 0.00 0.00 1.89
1404 1481 5.730550 AGGAACATTCGTCAGTTAGCATTA 58.269 37.500 0.00 0.00 0.00 1.90
1405 1482 4.579869 AGGAACATTCGTCAGTTAGCATT 58.420 39.130 0.00 0.00 0.00 3.56
1406 1483 4.207891 AGGAACATTCGTCAGTTAGCAT 57.792 40.909 0.00 0.00 0.00 3.79
1407 1484 3.678056 AGGAACATTCGTCAGTTAGCA 57.322 42.857 0.00 0.00 0.00 3.49
1408 1485 3.125316 CCAAGGAACATTCGTCAGTTAGC 59.875 47.826 0.00 0.00 0.00 3.09
1410 1487 3.325425 TCCCAAGGAACATTCGTCAGTTA 59.675 43.478 0.00 0.00 0.00 2.24
1411 1488 2.105821 TCCCAAGGAACATTCGTCAGTT 59.894 45.455 0.00 0.00 0.00 3.16
1412 1489 1.697432 TCCCAAGGAACATTCGTCAGT 59.303 47.619 0.00 0.00 0.00 3.41
1413 1490 2.472695 TCCCAAGGAACATTCGTCAG 57.527 50.000 0.00 0.00 0.00 3.51
1414 1491 2.778299 CTTCCCAAGGAACATTCGTCA 58.222 47.619 0.00 0.00 36.71 4.35
1430 1507 1.079057 GTCGCTGGGAGTTCCTTCC 60.079 63.158 0.00 0.00 36.20 3.46
1431 1508 1.079057 GGTCGCTGGGAGTTCCTTC 60.079 63.158 0.00 0.00 36.20 3.46
1432 1509 2.943978 CGGTCGCTGGGAGTTCCTT 61.944 63.158 0.00 0.00 36.20 3.36
1433 1510 3.382832 CGGTCGCTGGGAGTTCCT 61.383 66.667 0.00 0.00 36.20 3.36
1434 1511 2.726822 AAACGGTCGCTGGGAGTTCC 62.727 60.000 0.00 0.00 0.00 3.62
1435 1512 1.301479 AAACGGTCGCTGGGAGTTC 60.301 57.895 0.00 0.00 0.00 3.01
1436 1513 1.597027 CAAACGGTCGCTGGGAGTT 60.597 57.895 0.00 0.00 0.00 3.01
1437 1514 1.827399 ATCAAACGGTCGCTGGGAGT 61.827 55.000 0.00 0.00 0.00 3.85
1438 1515 1.079127 ATCAAACGGTCGCTGGGAG 60.079 57.895 0.00 0.00 0.00 4.30
1439 1516 1.079405 GATCAAACGGTCGCTGGGA 60.079 57.895 0.00 0.00 0.00 4.37
1440 1517 2.452813 CGATCAAACGGTCGCTGGG 61.453 63.158 0.00 0.00 0.00 4.45
1441 1518 1.413767 CTCGATCAAACGGTCGCTGG 61.414 60.000 0.00 0.00 37.74 4.85
1442 1519 1.413767 CCTCGATCAAACGGTCGCTG 61.414 60.000 0.00 0.00 37.74 5.18
1443 1520 1.153823 CCTCGATCAAACGGTCGCT 60.154 57.895 0.00 0.00 37.74 4.93
1444 1521 1.411493 GACCTCGATCAAACGGTCGC 61.411 60.000 3.79 0.00 36.88 5.19
1445 1522 0.109458 TGACCTCGATCAAACGGTCG 60.109 55.000 12.90 0.00 46.88 4.79
1446 1523 2.074547 TTGACCTCGATCAAACGGTC 57.925 50.000 11.32 11.32 44.76 4.79
1447 1524 2.036733 TCTTTGACCTCGATCAAACGGT 59.963 45.455 9.57 0.89 42.32 4.83
1448 1525 2.683968 TCTTTGACCTCGATCAAACGG 58.316 47.619 9.57 3.17 42.32 4.44
1449 1526 4.377431 CCTTTCTTTGACCTCGATCAAACG 60.377 45.833 9.57 7.14 42.32 3.60
1450 1527 4.755123 TCCTTTCTTTGACCTCGATCAAAC 59.245 41.667 9.57 0.00 42.32 2.93
1451 1528 4.968259 TCCTTTCTTTGACCTCGATCAAA 58.032 39.130 12.36 12.36 44.40 2.69
1452 1529 4.617253 TCCTTTCTTTGACCTCGATCAA 57.383 40.909 0.00 0.00 36.80 2.57
1453 1530 4.563580 CCTTCCTTTCTTTGACCTCGATCA 60.564 45.833 0.00 0.00 0.00 2.92
1454 1531 3.935828 CCTTCCTTTCTTTGACCTCGATC 59.064 47.826 0.00 0.00 0.00 3.69
1455 1532 3.870299 GCCTTCCTTTCTTTGACCTCGAT 60.870 47.826 0.00 0.00 0.00 3.59
1456 1533 2.550208 GCCTTCCTTTCTTTGACCTCGA 60.550 50.000 0.00 0.00 0.00 4.04
1457 1534 1.807142 GCCTTCCTTTCTTTGACCTCG 59.193 52.381 0.00 0.00 0.00 4.63
1458 1535 2.816672 CTGCCTTCCTTTCTTTGACCTC 59.183 50.000 0.00 0.00 0.00 3.85
1459 1536 2.489802 CCTGCCTTCCTTTCTTTGACCT 60.490 50.000 0.00 0.00 0.00 3.85
1460 1537 1.889170 CCTGCCTTCCTTTCTTTGACC 59.111 52.381 0.00 0.00 0.00 4.02
1461 1538 2.587522 ACCTGCCTTCCTTTCTTTGAC 58.412 47.619 0.00 0.00 0.00 3.18
1462 1539 3.312736 AACCTGCCTTCCTTTCTTTGA 57.687 42.857 0.00 0.00 0.00 2.69
1463 1540 4.406648 AAAACCTGCCTTCCTTTCTTTG 57.593 40.909 0.00 0.00 0.00 2.77
1495 1572 3.609853 TCACGCTGGAGATAGCATTTTT 58.390 40.909 0.00 0.00 43.87 1.94
1496 1573 3.266510 TCACGCTGGAGATAGCATTTT 57.733 42.857 0.00 0.00 43.87 1.82
1497 1574 2.988010 TCACGCTGGAGATAGCATTT 57.012 45.000 0.00 0.00 43.87 2.32
1498 1575 2.988010 TTCACGCTGGAGATAGCATT 57.012 45.000 0.00 0.00 43.87 3.56
1499 1576 2.988010 TTTCACGCTGGAGATAGCAT 57.012 45.000 0.00 0.00 43.87 3.79
1500 1577 2.938451 CAATTTCACGCTGGAGATAGCA 59.062 45.455 0.00 0.00 43.87 3.49
1501 1578 3.001736 GTCAATTTCACGCTGGAGATAGC 59.998 47.826 0.00 0.00 40.29 2.97
1502 1579 4.183865 TGTCAATTTCACGCTGGAGATAG 58.816 43.478 0.00 0.00 0.00 2.08
1503 1580 4.200838 TGTCAATTTCACGCTGGAGATA 57.799 40.909 0.00 0.00 0.00 1.98
1504 1581 3.057969 TGTCAATTTCACGCTGGAGAT 57.942 42.857 0.00 0.00 0.00 2.75
1505 1582 2.542020 TGTCAATTTCACGCTGGAGA 57.458 45.000 0.00 0.00 0.00 3.71
1506 1583 2.730090 GCATGTCAATTTCACGCTGGAG 60.730 50.000 0.00 0.00 0.00 3.86
1507 1584 1.199789 GCATGTCAATTTCACGCTGGA 59.800 47.619 0.00 0.00 0.00 3.86
1508 1585 1.200716 AGCATGTCAATTTCACGCTGG 59.799 47.619 0.00 0.00 33.16 4.85
1509 1586 2.624316 AGCATGTCAATTTCACGCTG 57.376 45.000 0.00 0.00 33.16 5.18
1510 1587 4.637534 AGATTAGCATGTCAATTTCACGCT 59.362 37.500 6.29 6.29 37.98 5.07
1511 1588 4.913376 AGATTAGCATGTCAATTTCACGC 58.087 39.130 0.00 0.00 0.00 5.34
1512 1589 6.110543 TGAGATTAGCATGTCAATTTCACG 57.889 37.500 9.23 0.00 29.80 4.35
1513 1590 8.746922 TTTTGAGATTAGCATGTCAATTTCAC 57.253 30.769 11.57 0.00 41.16 3.18
1536 1613 4.223144 AGTTGTAGGGAGTGGCAATTTTT 58.777 39.130 0.00 0.00 0.00 1.94
1537 1614 3.844640 AGTTGTAGGGAGTGGCAATTTT 58.155 40.909 0.00 0.00 0.00 1.82
1538 1615 3.525800 AGTTGTAGGGAGTGGCAATTT 57.474 42.857 0.00 0.00 0.00 1.82
1539 1616 4.650972 TTAGTTGTAGGGAGTGGCAATT 57.349 40.909 0.00 0.00 0.00 2.32
1540 1617 4.650972 TTTAGTTGTAGGGAGTGGCAAT 57.349 40.909 0.00 0.00 0.00 3.56
1541 1618 4.440826 TTTTAGTTGTAGGGAGTGGCAA 57.559 40.909 0.00 0.00 0.00 4.52
1542 1619 4.650972 ATTTTAGTTGTAGGGAGTGGCA 57.349 40.909 0.00 0.00 0.00 4.92
1543 1620 4.380550 GCAATTTTAGTTGTAGGGAGTGGC 60.381 45.833 0.00 0.00 0.00 5.01
1544 1621 4.157840 GGCAATTTTAGTTGTAGGGAGTGG 59.842 45.833 0.00 0.00 0.00 4.00
1545 1622 4.764823 TGGCAATTTTAGTTGTAGGGAGTG 59.235 41.667 0.00 0.00 0.00 3.51
1546 1623 4.993028 TGGCAATTTTAGTTGTAGGGAGT 58.007 39.130 0.00 0.00 0.00 3.85
1547 1624 5.067805 GGATGGCAATTTTAGTTGTAGGGAG 59.932 44.000 0.00 0.00 0.00 4.30
1548 1625 4.953579 GGATGGCAATTTTAGTTGTAGGGA 59.046 41.667 0.00 0.00 0.00 4.20
1549 1626 4.956075 AGGATGGCAATTTTAGTTGTAGGG 59.044 41.667 0.00 0.00 0.00 3.53
1550 1627 5.067805 GGAGGATGGCAATTTTAGTTGTAGG 59.932 44.000 0.00 0.00 0.00 3.18
1551 1628 5.652014 TGGAGGATGGCAATTTTAGTTGTAG 59.348 40.000 0.00 0.00 0.00 2.74
1552 1629 5.417580 GTGGAGGATGGCAATTTTAGTTGTA 59.582 40.000 0.00 0.00 0.00 2.41
1553 1630 4.220602 GTGGAGGATGGCAATTTTAGTTGT 59.779 41.667 0.00 0.00 0.00 3.32
1554 1631 4.220382 TGTGGAGGATGGCAATTTTAGTTG 59.780 41.667 0.00 0.00 0.00 3.16
1555 1632 4.415596 TGTGGAGGATGGCAATTTTAGTT 58.584 39.130 0.00 0.00 0.00 2.24
1556 1633 4.019174 CTGTGGAGGATGGCAATTTTAGT 58.981 43.478 0.00 0.00 0.00 2.24
1557 1634 3.181483 GCTGTGGAGGATGGCAATTTTAG 60.181 47.826 0.00 0.00 0.00 1.85
1558 1635 2.760092 GCTGTGGAGGATGGCAATTTTA 59.240 45.455 0.00 0.00 0.00 1.52
1559 1636 1.551883 GCTGTGGAGGATGGCAATTTT 59.448 47.619 0.00 0.00 0.00 1.82
1560 1637 1.188863 GCTGTGGAGGATGGCAATTT 58.811 50.000 0.00 0.00 0.00 1.82
1561 1638 1.033746 CGCTGTGGAGGATGGCAATT 61.034 55.000 0.00 0.00 0.00 2.32
1562 1639 1.452651 CGCTGTGGAGGATGGCAAT 60.453 57.895 0.00 0.00 0.00 3.56
1563 1640 2.046023 CGCTGTGGAGGATGGCAA 60.046 61.111 0.00 0.00 0.00 4.52
1564 1641 2.592032 TTCGCTGTGGAGGATGGCA 61.592 57.895 0.00 0.00 0.00 4.92
1565 1642 2.109126 GTTCGCTGTGGAGGATGGC 61.109 63.158 0.00 0.00 0.00 4.40
1566 1643 1.811266 CGTTCGCTGTGGAGGATGG 60.811 63.158 0.00 0.00 0.00 3.51
1567 1644 0.670546 AACGTTCGCTGTGGAGGATG 60.671 55.000 0.00 0.00 0.00 3.51
1568 1645 0.389948 GAACGTTCGCTGTGGAGGAT 60.390 55.000 13.36 0.00 0.00 3.24
1569 1646 1.006571 GAACGTTCGCTGTGGAGGA 60.007 57.895 13.36 0.00 0.00 3.71
1570 1647 2.372690 CGAACGTTCGCTGTGGAGG 61.373 63.158 34.54 8.59 44.26 4.30
1571 1648 3.147294 CGAACGTTCGCTGTGGAG 58.853 61.111 34.54 9.32 44.26 3.86
1580 1657 0.179233 CTTTTAGCCGGCGAACGTTC 60.179 55.000 22.38 18.47 42.24 3.95
1581 1658 1.571215 CCTTTTAGCCGGCGAACGTT 61.571 55.000 22.38 0.00 42.24 3.99
1582 1659 2.030958 CCTTTTAGCCGGCGAACGT 61.031 57.895 22.38 5.84 42.24 3.99
1583 1660 2.746803 CCCTTTTAGCCGGCGAACG 61.747 63.158 22.38 16.78 43.80 3.95
1584 1661 3.047718 GCCCTTTTAGCCGGCGAAC 62.048 63.158 22.38 6.28 31.92 3.95
1585 1662 2.748647 GCCCTTTTAGCCGGCGAA 60.749 61.111 23.20 20.88 31.92 4.70
1586 1663 4.789123 GGCCCTTTTAGCCGGCGA 62.789 66.667 23.20 14.61 43.99 5.54
1592 1669 5.977635 ACTTAAATCAATGGCCCTTTTAGC 58.022 37.500 0.00 0.00 0.00 3.09
1593 1670 7.410120 AGACTTAAATCAATGGCCCTTTTAG 57.590 36.000 0.00 0.00 0.00 1.85
1594 1671 6.379988 GGAGACTTAAATCAATGGCCCTTTTA 59.620 38.462 0.00 0.00 0.00 1.52
1595 1672 5.187772 GGAGACTTAAATCAATGGCCCTTTT 59.812 40.000 0.00 0.00 0.00 2.27
1596 1673 4.711846 GGAGACTTAAATCAATGGCCCTTT 59.288 41.667 0.00 0.00 0.00 3.11
1597 1674 4.281657 GGAGACTTAAATCAATGGCCCTT 58.718 43.478 0.00 0.00 0.00 3.95
1598 1675 3.373110 GGGAGACTTAAATCAATGGCCCT 60.373 47.826 0.00 0.00 0.00 5.19
1599 1676 2.959030 GGGAGACTTAAATCAATGGCCC 59.041 50.000 0.00 0.00 0.00 5.80
1600 1677 2.959030 GGGGAGACTTAAATCAATGGCC 59.041 50.000 0.00 0.00 0.00 5.36
1601 1678 3.631250 TGGGGAGACTTAAATCAATGGC 58.369 45.455 0.00 0.00 0.00 4.40
1602 1679 8.482852 AATTATGGGGAGACTTAAATCAATGG 57.517 34.615 0.00 0.00 0.00 3.16
1627 1704 5.005094 CCTCCGGTGTATTTACCTCAAAAA 58.995 41.667 0.00 0.00 38.62 1.94
1646 1723 3.067833 GTGTGCAAGTTCTAAGACCTCC 58.932 50.000 0.00 0.00 0.00 4.30
3690 7122 3.054878 ACTTGTACGTGACGGTCATTTC 58.945 45.455 14.78 0.47 0.00 2.17
3706 7138 8.653036 AATACACTAGAGGTCTTAGAACTTGT 57.347 34.615 0.00 4.42 25.20 3.16
3762 7194 5.488341 ACAAAAGTGACAGTTACAGTCTGT 58.512 37.500 10.99 10.99 46.86 3.41
3767 7199 6.200286 ACGATGTACAAAAGTGACAGTTACAG 59.800 38.462 0.00 0.00 0.00 2.74
3773 7205 7.847487 TCTTTTACGATGTACAAAAGTGACAG 58.153 34.615 13.85 7.96 39.30 3.51
3775 7207 7.288672 CCTCTTTTACGATGTACAAAAGTGAC 58.711 38.462 15.56 0.00 39.30 3.67
3777 7209 6.204108 ACCCTCTTTTACGATGTACAAAAGTG 59.796 38.462 13.85 11.94 39.30 3.16
3778 7210 6.204108 CACCCTCTTTTACGATGTACAAAAGT 59.796 38.462 13.85 10.35 39.30 2.66
3779 7211 6.425721 TCACCCTCTTTTACGATGTACAAAAG 59.574 38.462 0.00 5.13 39.51 2.27
3780 7212 6.203338 GTCACCCTCTTTTACGATGTACAAAA 59.797 38.462 0.00 0.00 0.00 2.44
3781 7213 5.697633 GTCACCCTCTTTTACGATGTACAAA 59.302 40.000 0.00 0.00 0.00 2.83
3782 7214 5.232463 GTCACCCTCTTTTACGATGTACAA 58.768 41.667 0.00 0.00 0.00 2.41
3783 7215 4.322198 GGTCACCCTCTTTTACGATGTACA 60.322 45.833 0.00 0.00 0.00 2.90
3784 7216 4.081807 AGGTCACCCTCTTTTACGATGTAC 60.082 45.833 0.00 0.00 35.62 2.90
3785 7217 4.091549 AGGTCACCCTCTTTTACGATGTA 58.908 43.478 0.00 0.00 35.62 2.29
3786 7218 2.904434 AGGTCACCCTCTTTTACGATGT 59.096 45.455 0.00 0.00 35.62 3.06
3787 7219 3.611766 AGGTCACCCTCTTTTACGATG 57.388 47.619 0.00 0.00 35.62 3.84
3788 7220 3.055312 GGAAGGTCACCCTCTTTTACGAT 60.055 47.826 0.00 0.00 41.56 3.73
3789 7221 2.301009 GGAAGGTCACCCTCTTTTACGA 59.699 50.000 0.00 0.00 41.56 3.43
3790 7222 2.302157 AGGAAGGTCACCCTCTTTTACG 59.698 50.000 0.00 0.00 41.56 3.18
3791 7223 4.368565 AAGGAAGGTCACCCTCTTTTAC 57.631 45.455 0.00 0.00 41.56 2.01
3792 7224 4.663592 AGAAAGGAAGGTCACCCTCTTTTA 59.336 41.667 2.57 0.00 41.56 1.52
3793 7225 3.463704 AGAAAGGAAGGTCACCCTCTTTT 59.536 43.478 2.18 2.18 41.56 2.27
3794 7226 3.056832 AGAAAGGAAGGTCACCCTCTTT 58.943 45.455 6.41 6.41 41.56 2.52
3795 7227 2.373502 CAGAAAGGAAGGTCACCCTCTT 59.626 50.000 0.00 0.00 41.56 2.85
3796 7228 1.981495 CAGAAAGGAAGGTCACCCTCT 59.019 52.381 0.00 0.00 41.56 3.69
3797 7229 1.003696 CCAGAAAGGAAGGTCACCCTC 59.996 57.143 0.00 0.00 41.56 4.30
3798 7230 1.068121 CCAGAAAGGAAGGTCACCCT 58.932 55.000 0.00 0.00 45.63 4.34
3799 7231 0.038310 CCCAGAAAGGAAGGTCACCC 59.962 60.000 0.00 0.00 41.22 4.61
3800 7232 0.771755 ACCCAGAAAGGAAGGTCACC 59.228 55.000 0.00 0.00 41.22 4.02
3801 7233 2.658807 AACCCAGAAAGGAAGGTCAC 57.341 50.000 0.00 0.00 41.22 3.67
3802 7234 2.486548 CGAAACCCAGAAAGGAAGGTCA 60.487 50.000 0.00 0.00 41.22 4.02
3803 7235 2.152016 CGAAACCCAGAAAGGAAGGTC 58.848 52.381 0.00 0.00 41.22 3.85
3804 7236 1.772453 TCGAAACCCAGAAAGGAAGGT 59.228 47.619 0.00 0.00 41.22 3.50
3805 7237 2.152016 GTCGAAACCCAGAAAGGAAGG 58.848 52.381 0.00 0.00 41.22 3.46
3806 7238 1.798813 CGTCGAAACCCAGAAAGGAAG 59.201 52.381 0.00 0.00 41.22 3.46
3807 7239 1.413445 TCGTCGAAACCCAGAAAGGAA 59.587 47.619 0.00 0.00 41.22 3.36
3808 7240 1.042229 TCGTCGAAACCCAGAAAGGA 58.958 50.000 0.00 0.00 41.22 3.36
3809 7241 2.000447 GATCGTCGAAACCCAGAAAGG 59.000 52.381 0.00 0.00 37.03 3.11
3810 7242 2.960819 AGATCGTCGAAACCCAGAAAG 58.039 47.619 0.00 0.00 0.00 2.62
3811 7243 3.396260 AAGATCGTCGAAACCCAGAAA 57.604 42.857 0.00 0.00 0.00 2.52
3812 7244 3.006537 AGAAAGATCGTCGAAACCCAGAA 59.993 43.478 0.00 0.00 0.00 3.02
3813 7245 2.561419 AGAAAGATCGTCGAAACCCAGA 59.439 45.455 0.00 0.00 0.00 3.86
3814 7246 2.960819 AGAAAGATCGTCGAAACCCAG 58.039 47.619 0.00 0.00 0.00 4.45
3815 7247 4.158949 TGATAGAAAGATCGTCGAAACCCA 59.841 41.667 0.00 0.00 0.00 4.51
3816 7248 4.679662 TGATAGAAAGATCGTCGAAACCC 58.320 43.478 0.00 0.00 0.00 4.11
3817 7249 6.830114 AATGATAGAAAGATCGTCGAAACC 57.170 37.500 0.00 0.00 0.00 3.27
3818 7250 9.784824 CATAAATGATAGAAAGATCGTCGAAAC 57.215 33.333 0.00 0.00 0.00 2.78
3819 7251 9.529325 ACATAAATGATAGAAAGATCGTCGAAA 57.471 29.630 0.00 0.00 0.00 3.46
3820 7252 9.529325 AACATAAATGATAGAAAGATCGTCGAA 57.471 29.630 0.00 0.00 0.00 3.71
3835 7267 9.499479 CTGCTATGGAAGAGTAACATAAATGAT 57.501 33.333 0.00 0.00 0.00 2.45
3836 7268 7.933577 CCTGCTATGGAAGAGTAACATAAATGA 59.066 37.037 0.00 0.00 0.00 2.57
3837 7269 7.933577 TCCTGCTATGGAAGAGTAACATAAATG 59.066 37.037 0.00 0.00 32.39 2.32
3838 7270 8.034313 TCCTGCTATGGAAGAGTAACATAAAT 57.966 34.615 0.00 0.00 32.39 1.40
3839 7271 7.432148 TCCTGCTATGGAAGAGTAACATAAA 57.568 36.000 0.00 0.00 32.39 1.40
3840 7272 7.432148 TTCCTGCTATGGAAGAGTAACATAA 57.568 36.000 3.01 0.00 40.80 1.90
3842 7274 5.957771 TTCCTGCTATGGAAGAGTAACAT 57.042 39.130 3.01 0.00 40.80 2.71
3855 7287 5.824624 CCAAGTTCACATACATTCCTGCTAT 59.175 40.000 0.00 0.00 0.00 2.97
3856 7288 5.185454 CCAAGTTCACATACATTCCTGCTA 58.815 41.667 0.00 0.00 0.00 3.49
3858 7290 3.129287 CCCAAGTTCACATACATTCCTGC 59.871 47.826 0.00 0.00 0.00 4.85
3879 7312 2.239907 GGGCTGTTATCCTGGGATATCC 59.760 54.545 13.87 13.87 37.02 2.59
3888 7321 6.382919 TTTACAACTAAGGGCTGTTATCCT 57.617 37.500 0.00 0.00 34.29 3.24
3893 7326 7.262772 GTTTTCTTTTACAACTAAGGGCTGTT 58.737 34.615 0.00 0.00 0.00 3.16
3898 7331 9.292195 TCTATGGTTTTCTTTTACAACTAAGGG 57.708 33.333 0.00 0.00 0.00 3.95
3903 7336 8.762481 AAGGTCTATGGTTTTCTTTTACAACT 57.238 30.769 0.00 0.00 0.00 3.16
3947 7387 1.003580 CTTGAAGGGCTCTGGTGCTTA 59.996 52.381 0.00 0.00 0.00 3.09
3949 7389 1.377994 CTTGAAGGGCTCTGGTGCT 59.622 57.895 0.00 0.00 0.00 4.40
3953 7393 0.255318 AGATGCTTGAAGGGCTCTGG 59.745 55.000 0.00 0.00 0.00 3.86
3954 7394 1.209990 AGAGATGCTTGAAGGGCTCTG 59.790 52.381 0.00 0.00 32.01 3.35
3955 7395 1.209990 CAGAGATGCTTGAAGGGCTCT 59.790 52.381 0.00 0.00 33.33 4.09
3956 7396 1.209019 TCAGAGATGCTTGAAGGGCTC 59.791 52.381 0.00 0.00 0.00 4.70
3957 7397 1.283347 TCAGAGATGCTTGAAGGGCT 58.717 50.000 0.00 0.00 0.00 5.19
3964 7404 4.259356 TGAGGTTTGATCAGAGATGCTTG 58.741 43.478 0.00 0.00 0.00 4.01
3965 7405 4.564782 TGAGGTTTGATCAGAGATGCTT 57.435 40.909 0.00 0.00 0.00 3.91
3975 7415 8.797438 AGGAGTTAGAATTTTTGAGGTTTGATC 58.203 33.333 0.00 0.00 0.00 2.92
3981 7421 9.862149 TCTTTTAGGAGTTAGAATTTTTGAGGT 57.138 29.630 0.00 0.00 0.00 3.85
4003 7444 5.923204 TCTCTCTCTCAAACTGCTTTCTTT 58.077 37.500 0.00 0.00 0.00 2.52
4004 7445 5.543507 TCTCTCTCTCAAACTGCTTTCTT 57.456 39.130 0.00 0.00 0.00 2.52
4007 7448 7.579761 ATTTTTCTCTCTCTCAAACTGCTTT 57.420 32.000 0.00 0.00 0.00 3.51
4033 7474 3.700038 TGCTAGAGTTGCTCCTAGGTAAC 59.300 47.826 9.08 12.49 33.19 2.50
4034 7475 3.954904 CTGCTAGAGTTGCTCCTAGGTAA 59.045 47.826 9.08 0.17 0.00 2.85
4041 7482 2.999355 CAAAGACTGCTAGAGTTGCTCC 59.001 50.000 0.00 0.00 33.83 4.70
4042 7483 3.658709 ACAAAGACTGCTAGAGTTGCTC 58.341 45.455 0.00 0.00 33.83 4.26
4044 7485 4.266502 CGATACAAAGACTGCTAGAGTTGC 59.733 45.833 0.00 0.00 33.83 4.17
4048 7489 4.336993 AGGTCGATACAAAGACTGCTAGAG 59.663 45.833 0.00 0.00 37.52 2.43
4049 7490 4.096532 CAGGTCGATACAAAGACTGCTAGA 59.903 45.833 0.00 0.00 37.52 2.43
4098 7540 2.956132 TGGCCTTTTCTGACCAAATGA 58.044 42.857 3.32 0.00 0.00 2.57
4099 7541 3.967332 ATGGCCTTTTCTGACCAAATG 57.033 42.857 3.32 0.00 35.41 2.32
4101 7543 5.127031 GCTATAATGGCCTTTTCTGACCAAA 59.873 40.000 9.46 0.00 35.41 3.28
4102 7544 4.644685 GCTATAATGGCCTTTTCTGACCAA 59.355 41.667 9.46 0.00 35.41 3.67
4103 7545 4.207165 GCTATAATGGCCTTTTCTGACCA 58.793 43.478 9.46 0.00 36.43 4.02
4104 7546 4.207165 TGCTATAATGGCCTTTTCTGACC 58.793 43.478 9.46 0.00 0.00 4.02
4105 7547 5.126067 TCTGCTATAATGGCCTTTTCTGAC 58.874 41.667 9.46 0.00 0.00 3.51
4106 7548 5.371526 CTCTGCTATAATGGCCTTTTCTGA 58.628 41.667 9.46 5.85 0.00 3.27
4107 7549 4.023365 GCTCTGCTATAATGGCCTTTTCTG 60.023 45.833 9.46 1.63 0.00 3.02
4108 7550 4.140536 GCTCTGCTATAATGGCCTTTTCT 58.859 43.478 9.46 0.66 0.00 2.52
4109 7551 3.254411 GGCTCTGCTATAATGGCCTTTTC 59.746 47.826 9.46 0.00 36.96 2.29
4110 7552 3.225940 GGCTCTGCTATAATGGCCTTTT 58.774 45.455 9.46 2.91 36.96 2.27
4111 7553 2.811873 CGGCTCTGCTATAATGGCCTTT 60.812 50.000 3.32 6.72 37.66 3.11
4112 7554 1.271054 CGGCTCTGCTATAATGGCCTT 60.271 52.381 3.32 0.00 37.66 4.35
4113 7555 0.322975 CGGCTCTGCTATAATGGCCT 59.677 55.000 3.32 0.00 37.66 5.19
4114 7556 1.301677 GCGGCTCTGCTATAATGGCC 61.302 60.000 0.00 0.00 36.60 5.36
4115 7557 1.301677 GGCGGCTCTGCTATAATGGC 61.302 60.000 0.00 0.00 34.52 4.40
4116 7558 0.035317 TGGCGGCTCTGCTATAATGG 59.965 55.000 11.43 0.00 34.52 3.16
4117 7559 2.005451 GATGGCGGCTCTGCTATAATG 58.995 52.381 11.43 0.00 36.07 1.90
4118 7560 1.065854 GGATGGCGGCTCTGCTATAAT 60.066 52.381 11.43 0.00 36.07 1.28
4119 7561 0.321671 GGATGGCGGCTCTGCTATAA 59.678 55.000 11.43 0.00 36.07 0.98
4120 7562 1.877576 CGGATGGCGGCTCTGCTATA 61.878 60.000 11.43 0.00 36.07 1.31
4121 7563 2.746359 GGATGGCGGCTCTGCTAT 59.254 61.111 11.43 0.00 38.91 2.97
4122 7564 3.916544 CGGATGGCGGCTCTGCTA 61.917 66.667 11.43 0.00 34.52 3.49
4130 7572 3.822192 TCGAGTGTCGGATGGCGG 61.822 66.667 0.00 0.00 40.88 6.13
4133 7575 1.139734 CAGGTCGAGTGTCGGATGG 59.860 63.158 0.00 0.00 40.88 3.51
4140 7582 5.670485 TCATAAATTATGCAGGTCGAGTGT 58.330 37.500 8.06 0.00 36.14 3.55
4142 7584 5.237344 GCTTCATAAATTATGCAGGTCGAGT 59.763 40.000 13.02 0.00 36.14 4.18
4146 7588 5.207768 CACGCTTCATAAATTATGCAGGTC 58.792 41.667 13.02 0.00 36.14 3.85
4168 7610 1.273986 TGCAGGCTGGATAAGGAGCA 61.274 55.000 17.64 0.94 36.90 4.26
4173 7615 2.706339 AGACTTGCAGGCTGGATAAG 57.294 50.000 17.64 11.38 27.71 1.73
4174 7616 2.305635 TGAAGACTTGCAGGCTGGATAA 59.694 45.455 17.64 0.00 30.77 1.75
4181 7623 4.970662 TCAAATATGAAGACTTGCAGGC 57.029 40.909 0.00 0.00 30.99 4.85
4210 7652 2.230940 CGTGCGATAGGTTGCGGAG 61.231 63.158 0.00 0.00 37.57 4.63
4213 7679 1.591594 ATCCGTGCGATAGGTTGCG 60.592 57.895 0.00 0.00 37.57 4.85
4220 7686 2.734591 GCTCCCATCCGTGCGATA 59.265 61.111 0.00 0.00 0.00 2.92
4221 7687 4.241555 GGCTCCCATCCGTGCGAT 62.242 66.667 0.00 0.00 0.00 4.58
4234 7700 2.188207 GAGAAAGAGGCCGGGCTC 59.812 66.667 42.54 42.54 0.00 4.70
4236 7702 4.491409 GGGAGAAAGAGGCCGGGC 62.491 72.222 22.67 22.67 0.00 6.13
4237 7703 4.162690 CGGGAGAAAGAGGCCGGG 62.163 72.222 2.18 0.00 0.00 5.73
4243 7716 1.218230 GCTATGCGCGGGAGAAAGAG 61.218 60.000 8.83 0.00 0.00 2.85
4244 7717 1.227263 GCTATGCGCGGGAGAAAGA 60.227 57.895 8.83 0.00 0.00 2.52
4249 7722 4.976925 CAGGGCTATGCGCGGGAG 62.977 72.222 8.83 0.00 46.18 4.30
4254 7727 1.650912 CATTGACAGGGCTATGCGC 59.349 57.895 0.00 0.00 41.91 6.09
4275 7748 0.878416 TCACATAACAAAGCGGCCAC 59.122 50.000 2.24 0.00 0.00 5.01
4279 7752 4.418013 TTGTCATCACATAACAAAGCGG 57.582 40.909 0.00 0.00 30.39 5.52
4318 8823 4.398988 TGGTGTGTTGCTTCATCCAATATC 59.601 41.667 0.00 0.00 0.00 1.63
4320 8825 3.505680 GTGGTGTGTTGCTTCATCCAATA 59.494 43.478 0.00 0.00 0.00 1.90
4338 8843 2.086610 AAACCAGCCAAGATTGTGGT 57.913 45.000 2.82 2.82 45.50 4.16
4339 8844 3.573967 ACTAAAACCAGCCAAGATTGTGG 59.426 43.478 1.72 1.72 42.05 4.17
4346 8851 5.705441 TGTCTATGAACTAAAACCAGCCAAG 59.295 40.000 0.00 0.00 0.00 3.61
4352 8857 7.942341 AGGAAACATGTCTATGAACTAAAACCA 59.058 33.333 0.00 0.00 37.73 3.67
4365 8870 9.976776 CTAGGGAGTATATAGGAAACATGTCTA 57.023 37.037 0.00 0.00 0.00 2.59
4367 8872 7.674772 ACCTAGGGAGTATATAGGAAACATGTC 59.325 40.741 14.81 0.00 38.73 3.06
4369 8874 8.437274 AACCTAGGGAGTATATAGGAAACATG 57.563 38.462 14.81 0.00 38.73 3.21
4370 8875 8.465971 AGAACCTAGGGAGTATATAGGAAACAT 58.534 37.037 14.81 0.00 38.73 2.71
4372 8877 8.172070 AGAGAACCTAGGGAGTATATAGGAAAC 58.828 40.741 14.81 0.00 38.73 2.78
4374 8879 7.908492 AGAGAACCTAGGGAGTATATAGGAA 57.092 40.000 14.81 0.00 38.73 3.36
4407 9010 7.284919 ACGAATCAAGAAAAAGGTAAATGGT 57.715 32.000 0.00 0.00 0.00 3.55
4408 9011 9.289303 CATACGAATCAAGAAAAAGGTAAATGG 57.711 33.333 0.00 0.00 0.00 3.16
4409 9012 9.840427 ACATACGAATCAAGAAAAAGGTAAATG 57.160 29.630 0.00 0.00 0.00 2.32
4422 9025 9.684448 ATGTGTCTAAGATACATACGAATCAAG 57.316 33.333 0.00 0.00 41.33 3.02
4500 9114 2.413837 CATGACGGACGAAAGAAACCT 58.586 47.619 0.00 0.00 0.00 3.50
4541 9155 8.755977 ACTACGGGTTGAATTCTCTAAAATAGA 58.244 33.333 7.05 0.00 0.00 1.98
4542 9156 8.943909 ACTACGGGTTGAATTCTCTAAAATAG 57.056 34.615 7.05 3.84 0.00 1.73
4543 9157 7.983484 GGACTACGGGTTGAATTCTCTAAAATA 59.017 37.037 7.05 0.00 0.00 1.40
4544 9158 6.822170 GGACTACGGGTTGAATTCTCTAAAAT 59.178 38.462 7.05 0.00 0.00 1.82
4545 9159 6.013984 AGGACTACGGGTTGAATTCTCTAAAA 60.014 38.462 7.05 0.00 0.00 1.52
4546 9160 5.482878 AGGACTACGGGTTGAATTCTCTAAA 59.517 40.000 7.05 0.00 0.00 1.85
4547 9161 5.021458 AGGACTACGGGTTGAATTCTCTAA 58.979 41.667 7.05 0.00 0.00 2.10
4548 9162 4.401519 CAGGACTACGGGTTGAATTCTCTA 59.598 45.833 7.05 0.00 0.00 2.43
4549 9163 3.195825 CAGGACTACGGGTTGAATTCTCT 59.804 47.826 7.05 0.00 0.00 3.10
4550 9164 3.056035 ACAGGACTACGGGTTGAATTCTC 60.056 47.826 7.05 0.06 0.00 2.87
4551 9165 2.904434 ACAGGACTACGGGTTGAATTCT 59.096 45.455 7.05 0.00 0.00 2.40
4552 9166 3.329929 ACAGGACTACGGGTTGAATTC 57.670 47.619 0.00 0.00 0.00 2.17
4553 9167 3.782656 AACAGGACTACGGGTTGAATT 57.217 42.857 0.00 0.00 0.00 2.17
4554 9168 3.782656 AAACAGGACTACGGGTTGAAT 57.217 42.857 0.00 0.00 0.00 2.57
4555 9169 3.564053 AAAACAGGACTACGGGTTGAA 57.436 42.857 0.00 0.00 0.00 2.69
4556 9170 4.101430 ACTTAAAACAGGACTACGGGTTGA 59.899 41.667 0.00 0.00 0.00 3.18
4557 9171 4.383173 ACTTAAAACAGGACTACGGGTTG 58.617 43.478 0.00 0.00 0.00 3.77
4558 9172 4.694760 ACTTAAAACAGGACTACGGGTT 57.305 40.909 0.00 0.00 0.00 4.11
4559 9173 4.694760 AACTTAAAACAGGACTACGGGT 57.305 40.909 0.00 0.00 0.00 5.28
4560 9174 7.495135 TTTTAACTTAAAACAGGACTACGGG 57.505 36.000 3.04 0.00 33.08 5.28
4586 9200 9.796062 TTGTGTAAAGTACGAAAATAACGATTC 57.204 29.630 0.00 0.00 34.70 2.52
4589 9203 9.635632 CTTTTGTGTAAAGTACGAAAATAACGA 57.364 29.630 0.00 0.00 38.73 3.85
4603 9217 6.972901 GAAAAGACAGGGACTTTTGTGTAAAG 59.027 38.462 10.26 0.00 44.20 1.85
4604 9218 6.661805 AGAAAAGACAGGGACTTTTGTGTAAA 59.338 34.615 10.26 0.00 44.20 2.01
4605 9219 6.184789 AGAAAAGACAGGGACTTTTGTGTAA 58.815 36.000 10.26 0.00 44.20 2.41
4606 9220 5.751586 AGAAAAGACAGGGACTTTTGTGTA 58.248 37.500 10.26 0.00 44.20 2.90
5014 9794 1.375853 TTTGCAATCTGGATCGCCGG 61.376 55.000 0.00 0.00 42.30 6.13
5345 10167 6.906659 AGAGAAAACATAACACATGCTCTTG 58.093 36.000 0.00 0.00 0.00 3.02
5352 10174 4.906618 ACGGGAGAGAAAACATAACACAT 58.093 39.130 0.00 0.00 0.00 3.21
5408 10230 9.152595 CCGTTCCCTAATATAAGATCTTTTAGC 57.847 37.037 14.36 2.80 0.00 3.09
5415 10237 5.956563 TCCCTCCGTTCCCTAATATAAGATC 59.043 44.000 0.00 0.00 0.00 2.75
5416 10238 5.912103 TCCCTCCGTTCCCTAATATAAGAT 58.088 41.667 0.00 0.00 0.00 2.40
5417 10239 5.343833 TCCCTCCGTTCCCTAATATAAGA 57.656 43.478 0.00 0.00 0.00 2.10
5426 10248 0.342313 ACCTAATCCCTCCGTTCCCT 59.658 55.000 0.00 0.00 0.00 4.20
5444 10266 8.911247 ATCGAAATTGCTAAGGATTAAACAAC 57.089 30.769 0.00 0.00 31.91 3.32
5445 10267 9.352784 CAATCGAAATTGCTAAGGATTAAACAA 57.647 29.630 0.00 0.00 36.15 2.83
5446 10268 8.735315 TCAATCGAAATTGCTAAGGATTAAACA 58.265 29.630 0.00 0.00 41.76 2.83
5447 10269 9.736023 ATCAATCGAAATTGCTAAGGATTAAAC 57.264 29.630 0.00 0.00 41.76 2.01
5448 10270 9.950680 GATCAATCGAAATTGCTAAGGATTAAA 57.049 29.630 0.00 0.00 41.76 1.52
5449 10271 8.567948 GGATCAATCGAAATTGCTAAGGATTAA 58.432 33.333 0.00 0.00 41.76 1.40
5450 10272 7.719193 TGGATCAATCGAAATTGCTAAGGATTA 59.281 33.333 0.00 0.00 41.76 1.75
5451 10273 6.547141 TGGATCAATCGAAATTGCTAAGGATT 59.453 34.615 0.00 0.00 41.76 3.01
5452 10274 6.064060 TGGATCAATCGAAATTGCTAAGGAT 58.936 36.000 0.00 0.00 41.76 3.24
5453 10275 5.436175 TGGATCAATCGAAATTGCTAAGGA 58.564 37.500 0.00 0.00 41.76 3.36
5454 10276 5.756195 TGGATCAATCGAAATTGCTAAGG 57.244 39.130 0.00 0.00 41.76 2.69
5455 10277 7.864686 TGTATGGATCAATCGAAATTGCTAAG 58.135 34.615 0.00 0.00 41.76 2.18
5456 10278 7.800155 TGTATGGATCAATCGAAATTGCTAA 57.200 32.000 0.00 0.00 41.76 3.09
5457 10279 7.984422 ATGTATGGATCAATCGAAATTGCTA 57.016 32.000 0.00 0.00 41.76 3.49
5458 10280 6.889301 ATGTATGGATCAATCGAAATTGCT 57.111 33.333 0.00 0.00 41.76 3.91
5459 10281 7.935338 AAATGTATGGATCAATCGAAATTGC 57.065 32.000 0.00 0.00 41.76 3.56
5460 10282 9.304731 ACAAAATGTATGGATCAATCGAAATTG 57.695 29.630 0.00 0.00 43.10 2.32
5463 10285 9.389755 TCTACAAAATGTATGGATCAATCGAAA 57.610 29.630 0.00 0.00 31.66 3.46
5464 10286 8.956533 TCTACAAAATGTATGGATCAATCGAA 57.043 30.769 0.00 0.00 31.66 3.71
5465 10287 8.956533 TTCTACAAAATGTATGGATCAATCGA 57.043 30.769 0.00 0.00 31.66 3.59
5484 10306 9.958180 TGAGGATGATTAACAAGATTTTCTACA 57.042 29.630 0.00 0.00 0.00 2.74
5524 10407 8.974238 TGAATCAATTCAGCCTCTTTGATTAAT 58.026 29.630 12.52 0.00 44.54 1.40
5531 10414 4.074970 ACGTGAATCAATTCAGCCTCTTT 58.925 39.130 5.68 0.00 46.44 2.52
5630 10513 7.144661 TCATTGCACGTTTAATGTGAGAAATT 58.855 30.769 20.05 0.00 37.29 1.82
5631 10514 6.676950 TCATTGCACGTTTAATGTGAGAAAT 58.323 32.000 20.05 12.58 37.29 2.17
5659 10542 5.930135 TCAAGGTATTTGATAGGAGCTTCC 58.070 41.667 0.00 0.00 40.82 3.46
5721 10604 3.872696 TGCAATCCAACAGATATCACGT 58.127 40.909 5.32 0.00 33.66 4.49
5727 10610 4.711399 CATCTCCTGCAATCCAACAGATA 58.289 43.478 0.00 0.00 35.90 1.98
5971 10854 1.514873 GTAACGTACCTGGTCGGCG 60.515 63.158 18.25 16.21 35.61 6.46
6328 11211 4.719369 AGCGACTTGGCGACGGAC 62.719 66.667 0.00 0.00 38.18 4.79
6763 11646 1.064611 AGTAGCAGTCTCGAGGCCTAA 60.065 52.381 14.69 0.00 0.00 2.69
6767 11650 0.528470 AACAGTAGCAGTCTCGAGGC 59.472 55.000 9.58 9.58 0.00 4.70
6890 11785 4.676546 TCACGATAGAAATCAGTCTGCAG 58.323 43.478 7.63 7.63 41.38 4.41
6914 11809 1.866015 ACGATTCCTGACATCCCAGA 58.134 50.000 0.00 0.00 36.29 3.86
6940 11835 0.739813 GGCTTGTTATCGGCGAGTGT 60.740 55.000 17.22 0.24 0.00 3.55
6968 11863 3.895232 ATACAGAGTGATGGAAAGCGT 57.105 42.857 0.00 0.00 0.00 5.07
6970 11865 7.519649 GCTTGATTATACAGAGTGATGGAAAGC 60.520 40.741 0.00 0.00 0.00 3.51
6976 11871 7.440255 TGATGTGCTTGATTATACAGAGTGATG 59.560 37.037 0.00 0.00 0.00 3.07
6978 11873 6.758416 GTGATGTGCTTGATTATACAGAGTGA 59.242 38.462 0.00 0.00 0.00 3.41
7093 11994 9.790344 TCCAAACATTCCATTGTCAAAATAAAT 57.210 25.926 0.00 0.00 0.00 1.40
7096 11997 7.961351 ACTCCAAACATTCCATTGTCAAAATA 58.039 30.769 0.00 0.00 0.00 1.40
7105 12009 2.819608 CACCGACTCCAAACATTCCATT 59.180 45.455 0.00 0.00 0.00 3.16
7108 12012 1.892209 ACACCGACTCCAAACATTCC 58.108 50.000 0.00 0.00 0.00 3.01
7273 12177 6.961359 TCCTTGTGAAATACGTATGAGTTG 57.039 37.500 9.24 0.00 0.00 3.16
7299 12203 1.963515 GTTGGAAACCTGTTGATGGCT 59.036 47.619 0.00 0.00 42.21 4.75
7544 12474 7.532682 TTGTTCATACAACCTTTCTTTTTGC 57.467 32.000 0.00 0.00 39.29 3.68
7559 12489 4.809426 CCTATTCACCTCGGTTGTTCATAC 59.191 45.833 0.00 0.00 0.00 2.39
7660 12595 2.352421 CCTCAAGAAAGTTGCTGCATGG 60.352 50.000 1.84 0.00 0.00 3.66
7680 12624 4.389374 TCTGTTGATTGTCTGAGGAAACC 58.611 43.478 0.00 0.00 0.00 3.27
7689 12663 4.275936 CGTTCCCTTTTCTGTTGATTGTCT 59.724 41.667 0.00 0.00 0.00 3.41
7706 12680 5.223382 CACATCATACTACTGATCGTTCCC 58.777 45.833 0.00 0.00 33.59 3.97
7725 12699 1.478510 CTTGCTCGGTCTACTCCACAT 59.521 52.381 0.00 0.00 0.00 3.21
7726 12700 0.888619 CTTGCTCGGTCTACTCCACA 59.111 55.000 0.00 0.00 0.00 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.