Multiple sequence alignment - TraesCS7D01G267100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G267100 chr7D 100.000 5390 0 0 1 5390 249794045 249788656 0.000000e+00 9954.0
1 TraesCS7D01G267100 chr7A 94.777 2910 113 18 1801 4701 271376626 271379505 0.000000e+00 4495.0
2 TraesCS7D01G267100 chr7A 93.842 1088 39 15 723 1798 271375520 271376591 0.000000e+00 1613.0
3 TraesCS7D01G267100 chr7A 92.097 658 40 6 34 682 271373319 271373973 0.000000e+00 917.0
4 TraesCS7D01G267100 chr7A 79.775 356 57 11 229 573 628517995 628517644 1.500000e-60 244.0
5 TraesCS7D01G267100 chr7A 78.679 333 40 15 5070 5389 271379974 271380288 5.510000e-45 193.0
6 TraesCS7D01G267100 chr7A 97.059 34 1 0 676 709 271375550 271375517 2.100000e-04 58.4
7 TraesCS7D01G267100 chr7B 94.329 1922 67 19 949 2848 226905740 226903839 0.000000e+00 2907.0
8 TraesCS7D01G267100 chr7B 95.210 1837 70 12 2877 4701 226902804 226900974 0.000000e+00 2889.0
9 TraesCS7D01G267100 chr7B 84.758 433 50 7 231 655 226997918 226997494 2.320000e-113 420.0
10 TraesCS7D01G267100 chr7B 79.878 328 45 11 5070 5389 226900718 226900404 2.530000e-53 220.0
11 TraesCS7D01G267100 chr7B 78.652 356 57 9 229 573 589705329 589705676 9.090000e-53 219.0
12 TraesCS7D01G267100 chr7B 90.370 135 12 1 3 136 227006796 227006662 5.550000e-40 176.0
13 TraesCS7D01G267100 chr7B 81.304 230 2 8 723 928 226905942 226905730 1.210000e-31 148.0
14 TraesCS7D01G267100 chr7B 90.426 94 8 1 4880 4973 632487744 632487652 7.330000e-24 122.0
15 TraesCS7D01G267100 chr7B 92.000 50 4 0 1230 1279 226905423 226905374 2.690000e-08 71.3
16 TraesCS7D01G267100 chr7B 100.000 35 0 0 2845 2879 226902919 226902885 1.250000e-06 65.8
17 TraesCS7D01G267100 chr4A 79.271 439 71 13 228 652 24941679 24941247 6.830000e-74 289.0
18 TraesCS7D01G267100 chr4A 80.333 300 55 4 322 618 557783054 557783352 1.950000e-54 224.0
19 TraesCS7D01G267100 chr3B 78.490 437 76 13 226 650 183789430 183789860 2.470000e-68 270.0
20 TraesCS7D01G267100 chr4B 80.247 324 47 15 228 538 117040470 117040789 1.510000e-55 228.0
21 TraesCS7D01G267100 chr4B 76.884 398 79 9 231 618 60431673 60431279 4.230000e-51 213.0
22 TraesCS7D01G267100 chr4B 83.562 146 16 4 226 371 296295028 296295165 4.380000e-26 130.0
23 TraesCS7D01G267100 chr4B 96.078 51 2 0 5017 5067 643564588 643564538 3.460000e-12 84.2
24 TraesCS7D01G267100 chr4B 96.078 51 2 0 5017 5067 643572207 643572157 3.460000e-12 84.2
25 TraesCS7D01G267100 chr3D 80.251 319 47 8 228 537 500654742 500654431 5.430000e-55 226.0
26 TraesCS7D01G267100 chr3D 93.220 59 1 3 4774 4831 374360465 374360409 3.460000e-12 84.2
27 TraesCS7D01G267100 chr6A 78.095 315 62 7 306 616 529383790 529384101 5.510000e-45 193.0
28 TraesCS7D01G267100 chr6A 94.118 51 3 0 5017 5067 119752359 119752309 1.610000e-10 78.7
29 TraesCS7D01G267100 chr5D 92.000 125 8 2 1038 1160 399332297 399332173 2.000000e-39 174.0
30 TraesCS7D01G267100 chr5D 80.537 149 21 8 4829 4971 216151596 216151742 2.050000e-19 108.0
31 TraesCS7D01G267100 chr5B 92.000 125 8 2 1038 1160 479719516 479719392 2.000000e-39 174.0
32 TraesCS7D01G267100 chr5B 91.525 59 5 0 4773 4831 83902776 83902718 1.240000e-11 82.4
33 TraesCS7D01G267100 chr5A 90.400 125 10 2 1038 1160 504959878 504959754 4.320000e-36 163.0
34 TraesCS7D01G267100 chr5A 97.959 49 1 0 5017 5065 645424673 645424625 9.620000e-13 86.1
35 TraesCS7D01G267100 chr2D 83.893 149 17 5 230 371 49391115 49391263 9.420000e-28 135.0
36 TraesCS7D01G267100 chr2D 82.482 137 22 2 4830 4966 23079472 23079338 9.480000e-23 119.0
37 TraesCS7D01G267100 chr2B 93.182 88 4 2 4887 4973 372772449 372772535 1.580000e-25 128.0
38 TraesCS7D01G267100 chr2B 81.884 138 24 1 4830 4966 509573222 509573359 1.230000e-21 115.0
39 TraesCS7D01G267100 chr2B 94.828 58 3 0 4774 4831 550876474 550876417 2.070000e-14 91.6
40 TraesCS7D01G267100 chr2B 94.231 52 3 0 4830 4881 28583088 28583139 4.480000e-11 80.5
41 TraesCS7D01G267100 chr1D 82.000 150 21 3 4824 4973 365717063 365716920 7.330000e-24 122.0
42 TraesCS7D01G267100 chr1D 91.935 62 3 2 4771 4831 190762386 190762326 9.620000e-13 86.1
43 TraesCS7D01G267100 chr1D 94.118 51 3 0 5017 5067 395099224 395099174 1.610000e-10 78.7
44 TraesCS7D01G267100 chr1B 81.379 145 25 2 4830 4973 352890180 352890037 3.410000e-22 117.0
45 TraesCS7D01G267100 chrUn 81.757 148 18 8 228 369 16592909 16593053 1.230000e-21 115.0
46 TraesCS7D01G267100 chrUn 94.828 58 3 0 4774 4831 42177330 42177273 2.070000e-14 91.6
47 TraesCS7D01G267100 chrUn 96.078 51 2 0 5017 5067 60370774 60370824 3.460000e-12 84.2
48 TraesCS7D01G267100 chr3A 81.208 149 20 8 4830 4973 744995333 744995478 4.410000e-21 113.0
49 TraesCS7D01G267100 chr3A 80.537 149 21 8 4830 4973 745072426 745072571 2.050000e-19 108.0
50 TraesCS7D01G267100 chr3A 91.667 60 4 1 4768 4826 687031439 687031498 1.240000e-11 82.4
51 TraesCS7D01G267100 chr3A 94.340 53 3 0 5017 5069 729601142 729601090 1.240000e-11 82.4
52 TraesCS7D01G267100 chr3A 94.340 53 2 1 5017 5069 35403474 35403423 4.480000e-11 80.5
53 TraesCS7D01G267100 chr1A 79.739 153 21 9 4829 4973 454742664 454742814 9.550000e-18 102.0
54 TraesCS7D01G267100 chr2A 94.828 58 3 0 4774 4831 267885449 267885392 2.070000e-14 91.6
55 TraesCS7D01G267100 chr2A 94.828 58 3 0 4774 4831 680277627 680277570 2.070000e-14 91.6
56 TraesCS7D01G267100 chr4D 93.103 58 4 0 4774 4831 442397276 442397333 9.620000e-13 86.1
57 TraesCS7D01G267100 chr6D 96.000 50 2 0 5017 5066 451327942 451327893 1.240000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G267100 chr7D 249788656 249794045 5389 True 9954.000000 9954 100.00000 1 5390 1 chr7D.!!$R1 5389
1 TraesCS7D01G267100 chr7A 271373319 271380288 6969 False 1804.500000 4495 89.84875 34 5389 4 chr7A.!!$F1 5355
2 TraesCS7D01G267100 chr7B 226900404 226905942 5538 True 1050.183333 2907 90.45350 723 5389 6 chr7B.!!$R4 4666

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
713 722 0.034756 TTTGCTGTTCCTGCTAGCGA 59.965 50.000 10.77 0.0 40.24 4.93 F
1364 2915 0.391130 CATCGCCCTCCGTTTTCTCA 60.391 55.000 0.00 0.0 38.35 3.27 F
1488 3040 0.784778 CTCGTGTTCTTCAGTTCCGC 59.215 55.000 0.00 0.0 0.00 5.54 F
1879 3473 1.009108 CAATGCACCAACGTCGCAA 60.009 52.632 6.09 0.0 39.48 4.85 F
1891 3485 1.066143 ACGTCGCAATCCCTCTTGAAT 60.066 47.619 0.00 0.0 0.00 2.57 F
2079 3673 1.352083 TCCTGCTCTTGTGCTACCTT 58.648 50.000 0.00 0.0 0.00 3.50 F
2358 3956 2.358898 GTGTTCACAAGTGGCACAATCT 59.641 45.455 21.41 0.0 44.16 2.40 F
4080 6703 0.885879 ACTGGATGTACTTCGTCGCA 59.114 50.000 2.93 0.0 33.20 5.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1759 3321 1.936547 TGGCGGTTGCATTTTTGTTTC 59.063 42.857 0.00 0.0 45.35 2.78 R
2449 4049 2.818432 ACCGATATAGTTAGCCTCCACG 59.182 50.000 0.00 0.0 0.00 4.94 R
3207 5818 5.104151 TCCCAACATAGCCATCAACTCAATA 60.104 40.000 0.00 0.0 0.00 1.90 R
3826 6449 0.392336 TTGCCCCACAAATCTGCAAC 59.608 50.000 0.00 0.0 37.04 4.17 R
3828 6451 1.470996 GGTTGCCCCACAAATCTGCA 61.471 55.000 0.00 0.0 40.82 4.41 R
4033 6656 2.725815 GTGCGCGAACAAACAGGC 60.726 61.111 13.73 0.0 0.00 4.85 R
4191 6814 0.035317 TGCGTGCAACCAGAGATCTT 59.965 50.000 0.00 0.0 0.00 2.40 R
5249 8285 0.043637 AGGGGTTCTCCGGGATACAA 59.956 55.000 0.00 0.0 39.74 2.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.432607 TCATCATTCTTGAAGCAGTTGATC 57.567 37.500 0.00 0.00 34.96 2.92
25 26 5.941647 TCATCATTCTTGAAGCAGTTGATCA 59.058 36.000 0.00 0.00 34.96 2.92
26 27 5.874895 TCATTCTTGAAGCAGTTGATCAG 57.125 39.130 0.00 0.00 0.00 2.90
27 28 5.554070 TCATTCTTGAAGCAGTTGATCAGA 58.446 37.500 0.00 0.00 0.00 3.27
28 29 5.642491 TCATTCTTGAAGCAGTTGATCAGAG 59.358 40.000 0.00 0.00 0.00 3.35
29 30 3.935315 TCTTGAAGCAGTTGATCAGAGG 58.065 45.455 0.00 0.00 0.00 3.69
30 31 3.580022 TCTTGAAGCAGTTGATCAGAGGA 59.420 43.478 0.00 0.00 0.00 3.71
31 32 3.325293 TGAAGCAGTTGATCAGAGGAC 57.675 47.619 0.00 0.00 0.00 3.85
32 33 2.027745 TGAAGCAGTTGATCAGAGGACC 60.028 50.000 0.00 0.00 0.00 4.46
52 53 5.710099 GGACCTCTGGATTTGACACAATTTA 59.290 40.000 0.00 0.00 0.00 1.40
69 70 1.484038 TTATTTGGCATGCCCAGGTC 58.516 50.000 33.44 8.41 46.39 3.85
94 95 1.330521 AGTGACGTCAATGTGTTGCAC 59.669 47.619 21.95 4.07 35.26 4.57
187 188 7.649057 TCAATACAACATGGACTACTATCTCG 58.351 38.462 0.00 0.00 0.00 4.04
202 203 6.630203 ACTATCTCGTGGTATCTATCCTCT 57.370 41.667 0.00 0.00 0.00 3.69
203 204 6.411376 ACTATCTCGTGGTATCTATCCTCTG 58.589 44.000 0.00 0.00 0.00 3.35
215 216 4.465886 TCTATCCTCTGTGAGCTACCTTC 58.534 47.826 0.00 0.00 0.00 3.46
217 218 0.457851 CCTCTGTGAGCTACCTTCGG 59.542 60.000 0.00 0.00 0.00 4.30
220 221 0.459237 CTGTGAGCTACCTTCGGCAG 60.459 60.000 0.00 0.00 0.00 4.85
262 263 2.489722 GAGAGGGCATTTGGAGTGTTTC 59.510 50.000 0.00 0.00 0.00 2.78
275 276 2.802247 GAGTGTTTCAAGCCCATTTTGC 59.198 45.455 0.00 0.00 0.00 3.68
276 277 2.170187 AGTGTTTCAAGCCCATTTTGCA 59.830 40.909 0.00 0.00 0.00 4.08
302 303 3.877508 GCTCGTGGACCTGCTAAATAATT 59.122 43.478 0.00 0.00 0.00 1.40
372 380 0.984230 TGTGGAGGATGAGGGTGAAC 59.016 55.000 0.00 0.00 0.00 3.18
381 389 4.657824 AGGGTGAACGTGCCGTCG 62.658 66.667 0.00 0.00 39.99 5.12
403 411 4.811557 CGGAGGTCTGGAATTTGAGAATAC 59.188 45.833 0.00 0.00 0.00 1.89
405 413 5.395324 GGAGGTCTGGAATTTGAGAATACGA 60.395 44.000 0.00 0.00 0.00 3.43
430 438 4.103153 TGATCCTATCCAACTTCCACATCC 59.897 45.833 0.00 0.00 0.00 3.51
435 443 3.433306 TCCAACTTCCACATCCGAATT 57.567 42.857 0.00 0.00 0.00 2.17
436 444 4.561500 TCCAACTTCCACATCCGAATTA 57.438 40.909 0.00 0.00 0.00 1.40
437 445 4.513442 TCCAACTTCCACATCCGAATTAG 58.487 43.478 0.00 0.00 0.00 1.73
439 447 2.919228 ACTTCCACATCCGAATTAGGC 58.081 47.619 0.00 0.00 0.00 3.93
467 475 9.659830 ACTTTAACGAGTTTGTTCAAATGTATC 57.340 29.630 1.33 0.00 33.32 2.24
470 478 7.908193 AACGAGTTTGTTCAAATGTATCAAC 57.092 32.000 1.33 0.00 0.00 3.18
478 487 8.726650 TTGTTCAAATGTATCAACAAATCGAG 57.273 30.769 0.00 0.00 39.58 4.04
493 502 1.926561 TCGAGACCGAGCAAATCATG 58.073 50.000 0.00 0.00 40.30 3.07
498 507 1.329906 GACCGAGCAAATCATGAGCAG 59.670 52.381 0.09 0.00 0.00 4.24
502 511 2.610833 CGAGCAAATCATGAGCAGCTAA 59.389 45.455 15.78 0.00 31.61 3.09
571 580 6.361114 CAGATCATATGCGTGAGTTGAATTC 58.639 40.000 0.00 0.00 0.00 2.17
577 586 7.697710 TCATATGCGTGAGTTGAATTCAAATTC 59.302 33.333 22.07 20.58 43.91 2.17
652 661 7.011202 GGAGTACTCTCGGGTTTGAATATTTTC 59.989 40.741 21.88 0.00 41.26 2.29
677 686 3.017442 TGAAACATGGTGTCCGTTTTGA 58.983 40.909 0.00 0.00 33.18 2.69
678 687 3.066064 TGAAACATGGTGTCCGTTTTGAG 59.934 43.478 0.00 0.00 33.18 3.02
680 689 0.240945 CATGGTGTCCGTTTTGAGGC 59.759 55.000 0.00 0.00 0.00 4.70
684 693 2.281276 GTCCGTTTTGAGGCCCGT 60.281 61.111 0.00 0.00 0.00 5.28
685 694 2.031465 TCCGTTTTGAGGCCCGTC 59.969 61.111 0.00 0.00 0.00 4.79
687 696 3.419759 CGTTTTGAGGCCCGTCGG 61.420 66.667 3.60 3.60 0.00 4.79
688 697 2.031465 GTTTTGAGGCCCGTCGGA 59.969 61.111 14.39 0.00 0.00 4.55
690 699 1.078708 TTTTGAGGCCCGTCGGATC 60.079 57.895 14.39 8.45 0.00 3.36
691 700 1.550130 TTTTGAGGCCCGTCGGATCT 61.550 55.000 14.39 9.51 0.00 2.75
692 701 1.550130 TTTGAGGCCCGTCGGATCTT 61.550 55.000 14.39 0.00 0.00 2.40
693 702 1.956629 TTGAGGCCCGTCGGATCTTC 61.957 60.000 14.39 10.43 0.00 2.87
695 704 1.677637 GAGGCCCGTCGGATCTTCTT 61.678 60.000 14.39 0.00 0.00 2.52
696 705 1.221021 GGCCCGTCGGATCTTCTTT 59.779 57.895 14.39 0.00 0.00 2.52
697 706 1.090052 GGCCCGTCGGATCTTCTTTG 61.090 60.000 14.39 0.00 0.00 2.77
700 709 1.002366 CCGTCGGATCTTCTTTGCTG 58.998 55.000 4.91 0.00 0.00 4.41
701 710 1.673033 CCGTCGGATCTTCTTTGCTGT 60.673 52.381 4.91 0.00 0.00 4.40
702 711 2.069273 CGTCGGATCTTCTTTGCTGTT 58.931 47.619 0.00 0.00 0.00 3.16
704 713 2.416893 GTCGGATCTTCTTTGCTGTTCC 59.583 50.000 0.00 0.00 0.00 3.62
706 715 2.417933 CGGATCTTCTTTGCTGTTCCTG 59.582 50.000 0.00 0.00 0.00 3.86
709 718 3.769739 TCTTCTTTGCTGTTCCTGCTA 57.230 42.857 0.00 0.00 0.00 3.49
710 719 3.668447 TCTTCTTTGCTGTTCCTGCTAG 58.332 45.455 0.00 0.00 0.00 3.42
713 722 0.034756 TTTGCTGTTCCTGCTAGCGA 59.965 50.000 10.77 0.00 40.24 4.93
717 726 0.596083 CTGTTCCTGCTAGCGATCCG 60.596 60.000 10.77 0.00 0.00 4.18
718 727 1.300233 GTTCCTGCTAGCGATCCGG 60.300 63.158 10.77 0.00 0.00 5.14
719 728 2.498941 TTCCTGCTAGCGATCCGGG 61.499 63.158 10.77 5.41 0.00 5.73
720 729 3.227276 CCTGCTAGCGATCCGGGT 61.227 66.667 10.77 0.00 0.00 5.28
838 2364 2.509964 CCCCCTTCCATAAGTACTGCTT 59.490 50.000 0.00 0.00 41.05 3.91
1284 2835 7.468922 TTTGATTAATACTCTGTCATCGCTG 57.531 36.000 0.00 0.00 0.00 5.18
1339 2890 2.575921 TCCCTCCTGGATGACAAGAT 57.424 50.000 0.00 0.00 38.61 2.40
1341 2892 1.476471 CCCTCCTGGATGACAAGATGC 60.476 57.143 0.00 0.00 35.39 3.91
1342 2893 1.211212 CCTCCTGGATGACAAGATGCA 59.789 52.381 0.00 0.00 34.57 3.96
1343 2894 2.158652 CCTCCTGGATGACAAGATGCAT 60.159 50.000 0.00 0.00 34.57 3.96
1344 2895 3.139850 CTCCTGGATGACAAGATGCATC 58.860 50.000 19.37 19.37 40.05 3.91
1357 2908 4.241555 GCATCCATCGCCCTCCGT 62.242 66.667 0.00 0.00 38.35 4.69
1364 2915 0.391130 CATCGCCCTCCGTTTTCTCA 60.391 55.000 0.00 0.00 38.35 3.27
1380 2931 9.197694 CCGTTTTCTCATCTCTAATTATGGTAG 57.802 37.037 0.00 0.00 0.00 3.18
1381 2932 9.197694 CGTTTTCTCATCTCTAATTATGGTAGG 57.802 37.037 0.00 0.00 0.00 3.18
1384 2935 8.423906 TTCTCATCTCTAATTATGGTAGGACC 57.576 38.462 0.00 0.00 39.22 4.46
1385 2936 7.770662 TCTCATCTCTAATTATGGTAGGACCT 58.229 38.462 0.00 0.00 39.58 3.85
1386 2937 7.671819 TCTCATCTCTAATTATGGTAGGACCTG 59.328 40.741 3.53 0.00 39.58 4.00
1387 2938 7.535738 TCATCTCTAATTATGGTAGGACCTGA 58.464 38.462 3.53 0.00 39.58 3.86
1388 2939 7.671819 TCATCTCTAATTATGGTAGGACCTGAG 59.328 40.741 3.53 0.00 39.58 3.35
1389 2940 5.775701 TCTCTAATTATGGTAGGACCTGAGC 59.224 44.000 3.53 0.00 39.58 4.26
1398 2949 2.125350 GACCTGAGCTTGCGGAGG 60.125 66.667 10.18 10.18 0.00 4.30
1419 2971 6.408092 GGAGGGATTGTTCCTTTTGACTTTTT 60.408 38.462 0.00 0.00 42.20 1.94
1488 3040 0.784778 CTCGTGTTCTTCAGTTCCGC 59.215 55.000 0.00 0.00 0.00 5.54
1518 3070 2.983402 TCGACACTCGACAGTAAAGG 57.017 50.000 0.00 0.00 44.82 3.11
1571 3123 2.549992 GGTTCCATGGCTTTTTCCCAAC 60.550 50.000 6.96 2.61 35.67 3.77
1653 3205 1.683943 ACAAATCATCTCCGCCATGG 58.316 50.000 7.63 7.63 40.09 3.66
1666 3218 5.014123 TCTCCGCCATGGGAAAAGATATTAT 59.986 40.000 15.13 0.00 38.76 1.28
1668 3220 6.785076 TCCGCCATGGGAAAAGATATTATTA 58.215 36.000 15.13 0.00 38.76 0.98
1669 3221 6.884295 TCCGCCATGGGAAAAGATATTATTAG 59.116 38.462 15.13 0.00 38.76 1.73
1670 3222 6.659242 CCGCCATGGGAAAAGATATTATTAGT 59.341 38.462 15.13 0.00 0.00 2.24
1673 3225 9.914131 GCCATGGGAAAAGATATTATTAGTTTC 57.086 33.333 15.13 0.00 0.00 2.78
1692 3244 6.173339 AGTTTCTTTAAGCCGATTGAGATCA 58.827 36.000 0.00 0.00 32.33 2.92
1715 3267 2.872245 CTGTGTCAGTTTGGACGATGTT 59.128 45.455 0.00 0.00 40.72 2.71
1759 3321 6.593978 GTGCACTCTTGTGAACTAATAACTG 58.406 40.000 10.32 0.00 46.65 3.16
1879 3473 1.009108 CAATGCACCAACGTCGCAA 60.009 52.632 6.09 0.00 39.48 4.85
1891 3485 1.066143 ACGTCGCAATCCCTCTTGAAT 60.066 47.619 0.00 0.00 0.00 2.57
2047 3641 7.861872 GCCATTAAACTGTTTTAGAACCGTAAA 59.138 33.333 11.48 0.00 32.90 2.01
2079 3673 1.352083 TCCTGCTCTTGTGCTACCTT 58.648 50.000 0.00 0.00 0.00 3.50
2120 3714 4.160626 CCAACCTCTAGCTAGCTAGTTTGT 59.839 45.833 38.27 30.80 44.59 2.83
2121 3715 5.337652 CCAACCTCTAGCTAGCTAGTTTGTT 60.338 44.000 38.27 33.21 44.59 2.83
2122 3716 5.331876 ACCTCTAGCTAGCTAGTTTGTTG 57.668 43.478 38.27 25.91 44.59 3.33
2168 3765 6.636850 CAGTAGTAGTTTGGTTTGCATTGTTC 59.363 38.462 0.00 0.00 0.00 3.18
2189 3786 6.156775 TGTTCTCCTCCTACATGATTGATGAA 59.843 38.462 0.00 0.00 35.80 2.57
2358 3956 2.358898 GTGTTCACAAGTGGCACAATCT 59.641 45.455 21.41 0.00 44.16 2.40
2449 4049 4.130118 ACTTGATCCTCGGCATTATTGAC 58.870 43.478 0.00 0.00 0.00 3.18
2558 4158 4.380023 GGCTTTTATGCGACACCATGTTTA 60.380 41.667 0.00 0.00 0.00 2.01
3207 5818 4.931661 TCTAGTCAAGAAGAACAACCGT 57.068 40.909 0.00 0.00 0.00 4.83
3308 5919 9.921637 CTTCTAGCTTCTCCGATAATTTTCTAT 57.078 33.333 0.00 0.00 0.00 1.98
3340 5951 7.096023 CGAAATGATCCTACCTTTTACTCATCG 60.096 40.741 0.00 0.00 0.00 3.84
3403 6014 7.401204 TGAGGGATCTATCACATACTGCATTAT 59.599 37.037 0.00 0.00 30.91 1.28
3599 6218 6.426587 ACATGCTAAAAACCTATGACCATCT 58.573 36.000 0.00 0.00 0.00 2.90
3826 6449 6.580788 CATCTATATATGTCTCCCTTGCCTG 58.419 44.000 0.00 0.00 0.00 4.85
3828 6451 6.084738 TCTATATATGTCTCCCTTGCCTGTT 58.915 40.000 0.00 0.00 0.00 3.16
4033 6656 5.421212 AGCTCGATAAACTCTACTTACCG 57.579 43.478 0.00 0.00 0.00 4.02
4077 6700 3.056749 AGGTTGACTGGATGTACTTCGTC 60.057 47.826 2.93 6.33 0.00 4.20
4080 6703 0.885879 ACTGGATGTACTTCGTCGCA 59.114 50.000 2.93 0.00 33.20 5.10
4191 6814 5.069318 TGACATGCCATTTTCTCACAACTA 58.931 37.500 0.00 0.00 0.00 2.24
4427 7051 5.431073 AGGCTGATATTCATATGGCATAGGT 59.569 40.000 17.67 3.56 0.00 3.08
4432 7056 6.885918 TGATATTCATATGGCATAGGTGGTTG 59.114 38.462 17.67 7.94 0.00 3.77
4446 7070 4.398319 AGGTGGTTGTAACAATTCTCAGG 58.602 43.478 0.00 0.00 0.00 3.86
4463 7087 6.301169 TCTCAGGGAGGAAATCTTTACTTC 57.699 41.667 0.00 0.00 29.60 3.01
4465 7089 6.054860 TCAGGGAGGAAATCTTTACTTCTG 57.945 41.667 10.47 10.47 35.68 3.02
4470 7094 5.124617 GGAGGAAATCTTTACTTCTGCAAGG 59.875 44.000 0.00 0.00 29.60 3.61
4479 7103 2.868899 ACTTCTGCAAGGAAAGGGAAG 58.131 47.619 6.54 6.54 37.00 3.46
4493 7117 1.527433 GGGAAGCCTGTCCAGTTTGC 61.527 60.000 1.49 0.00 39.70 3.68
4499 7123 2.017049 GCCTGTCCAGTTTGCGATATT 58.983 47.619 0.00 0.00 0.00 1.28
4565 7189 5.180117 TCTTTCTTTCGAGATTTTCTGCCTG 59.820 40.000 0.00 0.00 0.00 4.85
4578 7202 7.500559 AGATTTTCTGCCTGGACAATATCTAAC 59.499 37.037 0.00 0.00 0.00 2.34
4601 7225 3.696051 TGAGTTTAGCAATCATTCAGCCC 59.304 43.478 0.00 0.00 0.00 5.19
4656 7280 5.043903 ACGCTGTGTATTGATGTATGACTC 58.956 41.667 0.00 0.00 0.00 3.36
4674 7298 5.922053 TGACTCACATCAGATGGGAATAAG 58.078 41.667 16.43 7.37 43.17 1.73
4682 7306 6.548622 ACATCAGATGGGAATAAGAAATGGTG 59.451 38.462 15.13 0.00 33.60 4.17
4701 7325 4.225942 TGGTGCAGAATTATCTCTCCTTGT 59.774 41.667 0.00 0.00 32.03 3.16
4702 7326 5.189180 GGTGCAGAATTATCTCTCCTTGTT 58.811 41.667 0.00 0.00 32.03 2.83
4703 7327 5.649831 GGTGCAGAATTATCTCTCCTTGTTT 59.350 40.000 0.00 0.00 32.03 2.83
4704 7328 6.151817 GGTGCAGAATTATCTCTCCTTGTTTT 59.848 38.462 0.00 0.00 32.03 2.43
4722 7408 8.694540 CCTTGTTTTACCAAATGATCCATCATA 58.305 33.333 2.41 0.00 46.22 2.15
4725 7411 8.143193 TGTTTTACCAAATGATCCATCATATGC 58.857 33.333 2.41 0.00 46.22 3.14
4728 7414 5.637127 ACCAAATGATCCATCATATGCTGA 58.363 37.500 8.13 0.10 46.22 4.26
4729 7415 6.072649 ACCAAATGATCCATCATATGCTGAA 58.927 36.000 8.13 0.00 46.22 3.02
4762 7790 8.974238 TGAAAGGAATGCAGAATGAGAAATATT 58.026 29.630 0.00 0.00 39.69 1.28
4763 7791 9.460906 GAAAGGAATGCAGAATGAGAAATATTC 57.539 33.333 0.00 0.00 39.69 1.75
4765 7793 6.769822 AGGAATGCAGAATGAGAAATATTCGT 59.230 34.615 0.00 0.00 39.69 3.85
4766 7794 6.854892 GGAATGCAGAATGAGAAATATTCGTG 59.145 38.462 0.00 0.00 39.69 4.35
4767 7795 7.254898 GGAATGCAGAATGAGAAATATTCGTGA 60.255 37.037 0.00 0.00 39.69 4.35
4768 7796 6.594284 TGCAGAATGAGAAATATTCGTGAG 57.406 37.500 0.00 0.00 39.69 3.51
4769 7797 6.340522 TGCAGAATGAGAAATATTCGTGAGA 58.659 36.000 0.00 0.00 39.69 3.27
4785 7813 6.467723 TCGTGAGAAGAGAGCAATTTTAAC 57.532 37.500 0.00 0.00 37.03 2.01
4786 7814 5.989168 TCGTGAGAAGAGAGCAATTTTAACA 59.011 36.000 0.00 0.00 37.03 2.41
4787 7815 6.650807 TCGTGAGAAGAGAGCAATTTTAACAT 59.349 34.615 0.00 0.00 37.03 2.71
4788 7816 6.740002 CGTGAGAAGAGAGCAATTTTAACATG 59.260 38.462 0.00 0.00 0.00 3.21
4789 7817 6.525976 GTGAGAAGAGAGCAATTTTAACATGC 59.474 38.462 0.00 0.00 40.34 4.06
4795 7823 4.725790 AGCAATTTTAACATGCTCCCTC 57.274 40.909 0.00 0.00 46.98 4.30
4796 7824 4.347607 AGCAATTTTAACATGCTCCCTCT 58.652 39.130 0.00 0.00 46.98 3.69
4797 7825 4.774200 AGCAATTTTAACATGCTCCCTCTT 59.226 37.500 0.00 0.00 46.98 2.85
4798 7826 5.951747 AGCAATTTTAACATGCTCCCTCTTA 59.048 36.000 0.00 0.00 46.98 2.10
4799 7827 6.036470 GCAATTTTAACATGCTCCCTCTTAC 58.964 40.000 0.00 0.00 37.12 2.34
4800 7828 6.564328 CAATTTTAACATGCTCCCTCTTACC 58.436 40.000 0.00 0.00 0.00 2.85
4801 7829 5.514500 TTTTAACATGCTCCCTCTTACCT 57.486 39.130 0.00 0.00 0.00 3.08
4802 7830 4.755266 TTAACATGCTCCCTCTTACCTC 57.245 45.455 0.00 0.00 0.00 3.85
4803 7831 1.501582 ACATGCTCCCTCTTACCTCC 58.498 55.000 0.00 0.00 0.00 4.30
4804 7832 1.008938 ACATGCTCCCTCTTACCTCCT 59.991 52.381 0.00 0.00 0.00 3.69
4805 7833 1.691434 CATGCTCCCTCTTACCTCCTC 59.309 57.143 0.00 0.00 0.00 3.71
4806 7834 1.011595 TGCTCCCTCTTACCTCCTCT 58.988 55.000 0.00 0.00 0.00 3.69
4807 7835 1.362932 TGCTCCCTCTTACCTCCTCTT 59.637 52.381 0.00 0.00 0.00 2.85
4808 7836 2.225650 TGCTCCCTCTTACCTCCTCTTT 60.226 50.000 0.00 0.00 0.00 2.52
4809 7837 2.841266 GCTCCCTCTTACCTCCTCTTTT 59.159 50.000 0.00 0.00 0.00 2.27
4810 7838 3.118555 GCTCCCTCTTACCTCCTCTTTTC 60.119 52.174 0.00 0.00 0.00 2.29
4811 7839 4.097418 CTCCCTCTTACCTCCTCTTTTCA 58.903 47.826 0.00 0.00 0.00 2.69
4812 7840 3.838903 TCCCTCTTACCTCCTCTTTTCAC 59.161 47.826 0.00 0.00 0.00 3.18
4813 7841 3.583086 CCCTCTTACCTCCTCTTTTCACA 59.417 47.826 0.00 0.00 0.00 3.58
4814 7842 4.226168 CCCTCTTACCTCCTCTTTTCACAT 59.774 45.833 0.00 0.00 0.00 3.21
4815 7843 5.425539 CCCTCTTACCTCCTCTTTTCACATA 59.574 44.000 0.00 0.00 0.00 2.29
4816 7844 6.407525 CCCTCTTACCTCCTCTTTTCACATAG 60.408 46.154 0.00 0.00 0.00 2.23
4817 7845 6.407525 CCTCTTACCTCCTCTTTTCACATAGG 60.408 46.154 0.00 0.00 0.00 2.57
4818 7846 6.261435 TCTTACCTCCTCTTTTCACATAGGA 58.739 40.000 0.00 0.00 36.69 2.94
4826 7854 8.609617 TCCTCTTTTCACATAGGAGATAAGAA 57.390 34.615 8.47 0.00 33.75 2.52
4827 7855 8.700051 TCCTCTTTTCACATAGGAGATAAGAAG 58.300 37.037 8.47 4.16 33.75 2.85
4828 7856 7.930865 CCTCTTTTCACATAGGAGATAAGAAGG 59.069 40.741 8.47 8.22 33.75 3.46
4829 7857 8.380742 TCTTTTCACATAGGAGATAAGAAGGT 57.619 34.615 5.53 0.00 32.17 3.50
4830 7858 9.488762 TCTTTTCACATAGGAGATAAGAAGGTA 57.511 33.333 5.53 0.00 32.17 3.08
4831 7859 9.535878 CTTTTCACATAGGAGATAAGAAGGTAC 57.464 37.037 0.16 0.00 29.00 3.34
4833 7861 8.466617 TTCACATAGGAGATAAGAAGGTACTC 57.533 38.462 0.00 0.00 38.49 2.59
4834 7862 7.005296 TCACATAGGAGATAAGAAGGTACTCC 58.995 42.308 0.00 0.00 44.97 3.85
4835 7863 6.209788 CACATAGGAGATAAGAAGGTACTCCC 59.790 46.154 0.00 0.00 45.53 4.30
4837 7865 5.069518 AGGAGATAAGAAGGTACTCCCTC 57.930 47.826 0.00 0.00 45.47 4.30
4838 7866 4.735020 AGGAGATAAGAAGGTACTCCCTCT 59.265 45.833 0.00 0.00 45.47 3.69
4839 7867 4.830600 GGAGATAAGAAGGTACTCCCTCTG 59.169 50.000 0.00 0.00 45.47 3.35
4840 7868 5.451354 GAGATAAGAAGGTACTCCCTCTGT 58.549 45.833 0.00 0.00 45.47 3.41
4841 7869 5.844601 AGATAAGAAGGTACTCCCTCTGTT 58.155 41.667 0.00 0.00 45.47 3.16
4842 7870 6.265304 AGATAAGAAGGTACTCCCTCTGTTT 58.735 40.000 0.00 0.00 45.47 2.83
4843 7871 4.893829 AAGAAGGTACTCCCTCTGTTTC 57.106 45.455 0.00 0.00 45.47 2.78
4844 7872 4.134933 AGAAGGTACTCCCTCTGTTTCT 57.865 45.455 0.00 0.00 45.47 2.52
4845 7873 5.272405 AGAAGGTACTCCCTCTGTTTCTA 57.728 43.478 0.00 0.00 45.47 2.10
4846 7874 5.652324 AGAAGGTACTCCCTCTGTTTCTAA 58.348 41.667 0.00 0.00 45.47 2.10
4847 7875 6.082707 AGAAGGTACTCCCTCTGTTTCTAAA 58.917 40.000 0.00 0.00 45.47 1.85
4848 7876 6.731448 AGAAGGTACTCCCTCTGTTTCTAAAT 59.269 38.462 0.00 0.00 45.47 1.40
4849 7877 7.899709 AGAAGGTACTCCCTCTGTTTCTAAATA 59.100 37.037 0.00 0.00 45.47 1.40
4850 7878 8.625467 AAGGTACTCCCTCTGTTTCTAAATAT 57.375 34.615 0.00 0.00 45.47 1.28
4851 7879 9.725206 AAGGTACTCCCTCTGTTTCTAAATATA 57.275 33.333 0.00 0.00 45.47 0.86
4852 7880 9.725206 AGGTACTCCCTCTGTTTCTAAATATAA 57.275 33.333 0.00 0.00 40.71 0.98
4853 7881 9.984190 GGTACTCCCTCTGTTTCTAAATATAAG 57.016 37.037 0.00 0.00 0.00 1.73
4856 7884 8.706521 ACTCCCTCTGTTTCTAAATATAAGACC 58.293 37.037 0.00 0.00 0.00 3.85
4857 7885 8.855804 TCCCTCTGTTTCTAAATATAAGACCT 57.144 34.615 0.00 0.00 0.00 3.85
4858 7886 9.280456 TCCCTCTGTTTCTAAATATAAGACCTT 57.720 33.333 0.00 0.00 0.00 3.50
4859 7887 9.907229 CCCTCTGTTTCTAAATATAAGACCTTT 57.093 33.333 0.00 0.00 0.00 3.11
4876 7904 7.158099 AGACCTTTTAGGAATTTCAATTCGG 57.842 36.000 0.00 3.94 44.43 4.30
4877 7905 6.946009 AGACCTTTTAGGAATTTCAATTCGGA 59.054 34.615 0.00 0.00 44.43 4.55
4878 7906 6.920817 ACCTTTTAGGAATTTCAATTCGGAC 58.079 36.000 0.00 0.00 44.43 4.79
4879 7907 6.719829 ACCTTTTAGGAATTTCAATTCGGACT 59.280 34.615 0.00 1.82 44.43 3.85
4880 7908 7.886446 ACCTTTTAGGAATTTCAATTCGGACTA 59.114 33.333 0.00 1.03 44.43 2.59
4881 7909 8.903820 CCTTTTAGGAATTTCAATTCGGACTAT 58.096 33.333 6.25 0.00 44.43 2.12
4919 7947 7.897575 AGTGTAGATTCACTCATTTCACTTC 57.102 36.000 0.00 0.00 44.07 3.01
4920 7948 6.587990 AGTGTAGATTCACTCATTTCACTTCG 59.412 38.462 0.00 0.00 44.07 3.79
4921 7949 6.366332 GTGTAGATTCACTCATTTCACTTCGT 59.634 38.462 0.00 0.00 35.68 3.85
4922 7950 7.541091 GTGTAGATTCACTCATTTCACTTCGTA 59.459 37.037 0.00 0.00 35.68 3.43
4923 7951 8.251026 TGTAGATTCACTCATTTCACTTCGTAT 58.749 33.333 0.00 0.00 0.00 3.06
4924 7952 7.531280 AGATTCACTCATTTCACTTCGTATG 57.469 36.000 0.00 0.00 0.00 2.39
4925 7953 5.530519 TTCACTCATTTCACTTCGTATGC 57.469 39.130 0.00 0.00 0.00 3.14
4926 7954 4.565022 TCACTCATTTCACTTCGTATGCA 58.435 39.130 0.00 0.00 0.00 3.96
4927 7955 4.627035 TCACTCATTTCACTTCGTATGCAG 59.373 41.667 0.00 0.00 0.00 4.41
4928 7956 4.389992 CACTCATTTCACTTCGTATGCAGT 59.610 41.667 0.00 0.00 0.00 4.40
4929 7957 4.997395 ACTCATTTCACTTCGTATGCAGTT 59.003 37.500 0.00 0.00 0.00 3.16
4930 7958 5.120830 ACTCATTTCACTTCGTATGCAGTTC 59.879 40.000 0.00 0.00 0.00 3.01
4931 7959 4.994217 TCATTTCACTTCGTATGCAGTTCA 59.006 37.500 0.00 0.00 0.00 3.18
4932 7960 5.643348 TCATTTCACTTCGTATGCAGTTCAT 59.357 36.000 0.00 0.00 39.17 2.57
4933 7961 6.816140 TCATTTCACTTCGTATGCAGTTCATA 59.184 34.615 0.00 0.00 36.63 2.15
4934 7962 7.495606 TCATTTCACTTCGTATGCAGTTCATAT 59.504 33.333 0.00 0.00 39.63 1.78
4935 7963 7.609760 TTTCACTTCGTATGCAGTTCATATT 57.390 32.000 0.00 0.00 39.63 1.28
4936 7964 6.588348 TCACTTCGTATGCAGTTCATATTG 57.412 37.500 0.00 0.00 39.63 1.90
4937 7965 5.523552 TCACTTCGTATGCAGTTCATATTGG 59.476 40.000 0.00 0.00 39.63 3.16
4938 7966 5.523552 CACTTCGTATGCAGTTCATATTGGA 59.476 40.000 0.00 0.00 39.63 3.53
4939 7967 6.037062 CACTTCGTATGCAGTTCATATTGGAA 59.963 38.462 0.00 0.00 39.63 3.53
4940 7968 6.767902 ACTTCGTATGCAGTTCATATTGGAAT 59.232 34.615 0.00 0.00 39.63 3.01
4941 7969 6.785488 TCGTATGCAGTTCATATTGGAATC 57.215 37.500 0.00 0.00 39.63 2.52
4942 7970 6.524734 TCGTATGCAGTTCATATTGGAATCT 58.475 36.000 0.00 0.00 39.63 2.40
4943 7971 6.646653 TCGTATGCAGTTCATATTGGAATCTC 59.353 38.462 0.00 0.00 39.63 2.75
4944 7972 6.648310 CGTATGCAGTTCATATTGGAATCTCT 59.352 38.462 0.00 0.00 39.63 3.10
4945 7973 7.814587 CGTATGCAGTTCATATTGGAATCTCTA 59.185 37.037 0.00 0.00 39.63 2.43
4946 7974 9.149225 GTATGCAGTTCATATTGGAATCTCTAG 57.851 37.037 0.00 0.00 39.63 2.43
4947 7975 7.365497 TGCAGTTCATATTGGAATCTCTAGA 57.635 36.000 0.00 0.00 0.00 2.43
4948 7976 7.795047 TGCAGTTCATATTGGAATCTCTAGAA 58.205 34.615 0.00 0.00 0.00 2.10
4949 7977 7.930325 TGCAGTTCATATTGGAATCTCTAGAAG 59.070 37.037 0.00 0.00 0.00 2.85
4950 7978 8.147058 GCAGTTCATATTGGAATCTCTAGAAGA 58.853 37.037 0.00 0.00 38.72 2.87
4974 8002 9.736819 AGATCTTATATTTAGGAATAGAGGGGG 57.263 37.037 0.00 0.00 31.58 5.40
4993 8021 4.275810 GGGGGTAAGAGTTAATCAAACCC 58.724 47.826 12.18 12.18 46.90 4.11
4995 8023 5.892160 GGGTAAGAGTTAATCAAACCCAC 57.108 43.478 14.68 0.00 46.86 4.61
4996 8024 5.567430 GGGTAAGAGTTAATCAAACCCACT 58.433 41.667 14.68 0.00 46.86 4.00
4997 8025 6.714278 GGGTAAGAGTTAATCAAACCCACTA 58.286 40.000 14.68 0.00 46.86 2.74
4998 8026 7.344134 GGGTAAGAGTTAATCAAACCCACTAT 58.656 38.462 14.68 0.00 46.86 2.12
4999 8027 7.832685 GGGTAAGAGTTAATCAAACCCACTATT 59.167 37.037 14.68 0.00 46.86 1.73
5000 8028 9.895138 GGTAAGAGTTAATCAAACCCACTATTA 57.105 33.333 0.00 0.00 39.03 0.98
5005 8033 9.516314 GAGTTAATCAAACCCACTATTAAATGC 57.484 33.333 0.00 0.00 39.03 3.56
5006 8034 9.030452 AGTTAATCAAACCCACTATTAAATGCA 57.970 29.630 0.00 0.00 39.03 3.96
5007 8035 9.646427 GTTAATCAAACCCACTATTAAATGCAA 57.354 29.630 0.00 0.00 31.38 4.08
5008 8036 9.646427 TTAATCAAACCCACTATTAAATGCAAC 57.354 29.630 0.00 0.00 0.00 4.17
5009 8037 6.656632 TCAAACCCACTATTAAATGCAACA 57.343 33.333 0.00 0.00 0.00 3.33
5010 8038 7.055667 TCAAACCCACTATTAAATGCAACAA 57.944 32.000 0.00 0.00 0.00 2.83
5011 8039 6.926272 TCAAACCCACTATTAAATGCAACAAC 59.074 34.615 0.00 0.00 0.00 3.32
5012 8040 5.054390 ACCCACTATTAAATGCAACAACG 57.946 39.130 0.00 0.00 0.00 4.10
5013 8041 4.082463 ACCCACTATTAAATGCAACAACGG 60.082 41.667 0.00 0.00 0.00 4.44
5014 8042 3.857093 CCACTATTAAATGCAACAACGGC 59.143 43.478 0.00 0.00 0.00 5.68
5015 8043 4.380444 CCACTATTAAATGCAACAACGGCT 60.380 41.667 0.00 0.00 0.00 5.52
5016 8044 5.160641 CACTATTAAATGCAACAACGGCTT 58.839 37.500 0.00 0.00 0.00 4.35
5017 8045 5.633182 CACTATTAAATGCAACAACGGCTTT 59.367 36.000 0.00 0.00 0.00 3.51
5018 8046 6.804295 CACTATTAAATGCAACAACGGCTTTA 59.196 34.615 0.00 0.00 0.00 1.85
5019 8047 6.804783 ACTATTAAATGCAACAACGGCTTTAC 59.195 34.615 0.00 0.00 0.00 2.01
5020 8048 2.432206 AATGCAACAACGGCTTTACC 57.568 45.000 0.00 0.00 0.00 2.85
5021 8049 1.616159 ATGCAACAACGGCTTTACCT 58.384 45.000 0.00 0.00 35.61 3.08
5022 8050 1.394618 TGCAACAACGGCTTTACCTT 58.605 45.000 0.00 0.00 35.61 3.50
5023 8051 1.751924 TGCAACAACGGCTTTACCTTT 59.248 42.857 0.00 0.00 35.61 3.11
5024 8052 2.223618 TGCAACAACGGCTTTACCTTTC 60.224 45.455 0.00 0.00 35.61 2.62
5025 8053 2.223618 GCAACAACGGCTTTACCTTTCA 60.224 45.455 0.00 0.00 35.61 2.69
5026 8054 3.552068 GCAACAACGGCTTTACCTTTCAT 60.552 43.478 0.00 0.00 35.61 2.57
5027 8055 3.915437 ACAACGGCTTTACCTTTCATG 57.085 42.857 0.00 0.00 35.61 3.07
5028 8056 3.219281 ACAACGGCTTTACCTTTCATGT 58.781 40.909 0.00 0.00 35.61 3.21
5029 8057 3.004315 ACAACGGCTTTACCTTTCATGTG 59.996 43.478 0.00 0.00 35.61 3.21
5030 8058 3.134574 ACGGCTTTACCTTTCATGTGA 57.865 42.857 0.00 0.00 35.61 3.58
5031 8059 3.482436 ACGGCTTTACCTTTCATGTGAA 58.518 40.909 0.00 0.00 35.61 3.18
5032 8060 3.886505 ACGGCTTTACCTTTCATGTGAAA 59.113 39.130 7.84 7.84 41.29 2.69
5033 8061 4.339814 ACGGCTTTACCTTTCATGTGAAAA 59.660 37.500 9.24 0.00 42.72 2.29
5034 8062 4.917415 CGGCTTTACCTTTCATGTGAAAAG 59.083 41.667 9.24 6.17 42.72 2.27
5035 8063 5.230182 GGCTTTACCTTTCATGTGAAAAGG 58.770 41.667 18.33 18.33 42.72 3.11
5036 8064 5.230182 GCTTTACCTTTCATGTGAAAAGGG 58.770 41.667 21.96 15.26 42.72 3.95
5037 8065 5.783111 CTTTACCTTTCATGTGAAAAGGGG 58.217 41.667 21.96 14.78 42.72 4.79
5038 8066 3.611025 ACCTTTCATGTGAAAAGGGGA 57.389 42.857 21.96 0.00 42.72 4.81
5039 8067 3.500343 ACCTTTCATGTGAAAAGGGGAG 58.500 45.455 21.96 4.44 42.72 4.30
5040 8068 2.827921 CCTTTCATGTGAAAAGGGGAGG 59.172 50.000 14.02 2.81 42.72 4.30
5041 8069 3.500343 CTTTCATGTGAAAAGGGGAGGT 58.500 45.455 9.24 0.00 42.72 3.85
5042 8070 4.508405 CCTTTCATGTGAAAAGGGGAGGTA 60.508 45.833 14.02 0.00 42.72 3.08
5043 8071 4.733077 TTCATGTGAAAAGGGGAGGTAA 57.267 40.909 0.00 0.00 0.00 2.85
5044 8072 4.301072 TCATGTGAAAAGGGGAGGTAAG 57.699 45.455 0.00 0.00 0.00 2.34
5045 8073 3.913799 TCATGTGAAAAGGGGAGGTAAGA 59.086 43.478 0.00 0.00 0.00 2.10
5046 8074 4.019321 TCATGTGAAAAGGGGAGGTAAGAG 60.019 45.833 0.00 0.00 0.00 2.85
5047 8075 2.642807 TGTGAAAAGGGGAGGTAAGAGG 59.357 50.000 0.00 0.00 0.00 3.69
5048 8076 2.026169 GTGAAAAGGGGAGGTAAGAGGG 60.026 54.545 0.00 0.00 0.00 4.30
5049 8077 2.157911 TGAAAAGGGGAGGTAAGAGGGA 60.158 50.000 0.00 0.00 0.00 4.20
5050 8078 2.272074 AAAGGGGAGGTAAGAGGGAG 57.728 55.000 0.00 0.00 0.00 4.30
5051 8079 0.326713 AAGGGGAGGTAAGAGGGAGC 60.327 60.000 0.00 0.00 0.00 4.70
5052 8080 1.003051 GGGGAGGTAAGAGGGAGCA 59.997 63.158 0.00 0.00 0.00 4.26
5053 8081 0.400670 GGGGAGGTAAGAGGGAGCAT 60.401 60.000 0.00 0.00 0.00 3.79
5054 8082 0.761802 GGGAGGTAAGAGGGAGCATG 59.238 60.000 0.00 0.00 0.00 4.06
5055 8083 1.501582 GGAGGTAAGAGGGAGCATGT 58.498 55.000 0.00 0.00 0.00 3.21
5056 8084 1.840635 GGAGGTAAGAGGGAGCATGTT 59.159 52.381 0.00 0.00 0.00 2.71
5057 8085 3.039011 GGAGGTAAGAGGGAGCATGTTA 58.961 50.000 0.00 0.00 0.00 2.41
5058 8086 3.454812 GGAGGTAAGAGGGAGCATGTTAA 59.545 47.826 0.00 0.00 0.00 2.01
5059 8087 4.080526 GGAGGTAAGAGGGAGCATGTTAAA 60.081 45.833 0.00 0.00 0.00 1.52
5060 8088 5.497474 GAGGTAAGAGGGAGCATGTTAAAA 58.503 41.667 0.00 0.00 0.00 1.52
5061 8089 5.887754 AGGTAAGAGGGAGCATGTTAAAAA 58.112 37.500 0.00 0.00 0.00 1.94
5087 8115 3.374367 TCGTGAGAAGAACCGTATGAGAG 59.626 47.826 0.00 0.00 37.03 3.20
5138 8166 3.428534 GGTGCTTAAAACAAAATGCTCCG 59.571 43.478 0.00 0.00 0.00 4.63
5155 8183 3.365364 GCTCCGTCTTGAGATTTGGTTTG 60.365 47.826 0.00 0.00 34.11 2.93
5159 8187 6.001460 TCCGTCTTGAGATTTGGTTTGTTAT 58.999 36.000 0.00 0.00 0.00 1.89
5160 8188 6.072728 TCCGTCTTGAGATTTGGTTTGTTATG 60.073 38.462 0.00 0.00 0.00 1.90
5166 8194 7.214467 TGAGATTTGGTTTGTTATGGTTCTC 57.786 36.000 0.00 0.00 0.00 2.87
5169 8197 3.495434 TGGTTTGTTATGGTTCTCGGT 57.505 42.857 0.00 0.00 0.00 4.69
5174 8202 4.345859 TTGTTATGGTTCTCGGTCACTT 57.654 40.909 0.00 0.00 0.00 3.16
5175 8203 3.659786 TGTTATGGTTCTCGGTCACTTG 58.340 45.455 0.00 0.00 0.00 3.16
5180 8209 0.680061 GTTCTCGGTCACTTGGTCCT 59.320 55.000 0.00 0.00 0.00 3.85
5205 8235 4.861102 AGGCTTCCTTGAATTTTCACTG 57.139 40.909 0.00 0.00 36.83 3.66
5208 8238 5.010415 AGGCTTCCTTGAATTTTCACTGAAG 59.990 40.000 18.08 18.08 42.32 3.02
5214 8244 2.293122 TGAATTTTCACTGAAGCCACCG 59.707 45.455 0.00 0.00 31.01 4.94
5223 8253 1.448893 GAAGCCACCGTTATCGCCA 60.449 57.895 0.00 0.00 35.54 5.69
5226 8256 1.095228 AGCCACCGTTATCGCCATTG 61.095 55.000 0.00 0.00 35.54 2.82
5227 8257 1.092921 GCCACCGTTATCGCCATTGA 61.093 55.000 0.00 0.00 35.54 2.57
5229 8259 1.531149 CCACCGTTATCGCCATTGATC 59.469 52.381 0.00 0.00 35.54 2.92
5230 8260 1.192312 CACCGTTATCGCCATTGATCG 59.808 52.381 0.00 0.00 35.54 3.69
5233 8263 2.542178 CCGTTATCGCCATTGATCGAAA 59.458 45.455 0.00 0.00 38.28 3.46
5234 8264 3.531982 CGTTATCGCCATTGATCGAAAC 58.468 45.455 0.00 9.09 38.28 2.78
5236 8266 4.260212 CGTTATCGCCATTGATCGAAACTT 60.260 41.667 0.00 0.00 38.28 2.66
5238 8268 2.006888 TCGCCATTGATCGAAACTTCC 58.993 47.619 0.00 0.00 0.00 3.46
5239 8269 1.737236 CGCCATTGATCGAAACTTCCA 59.263 47.619 0.00 0.00 0.00 3.53
5243 8279 3.489738 CCATTGATCGAAACTTCCATGGC 60.490 47.826 6.96 0.00 30.96 4.40
5249 8285 4.599047 TCGAAACTTCCATGGCAAAAAT 57.401 36.364 6.96 0.00 0.00 1.82
5258 8294 3.131933 TCCATGGCAAAAATTGTATCCCG 59.868 43.478 6.96 0.00 0.00 5.14
5260 8296 2.808919 TGGCAAAAATTGTATCCCGGA 58.191 42.857 0.73 0.00 0.00 5.14
5267 8303 1.137697 ATTGTATCCCGGAGAACCCC 58.862 55.000 0.73 0.00 0.00 4.95
5269 8305 0.398098 TGTATCCCGGAGAACCCCTC 60.398 60.000 0.73 0.00 41.22 4.30
5270 8306 1.152610 TATCCCGGAGAACCCCTCG 60.153 63.158 0.73 0.00 42.89 4.63
5271 8307 2.651841 TATCCCGGAGAACCCCTCGG 62.652 65.000 0.73 0.00 42.89 4.63
5273 8309 3.771160 CCGGAGAACCCCTCGGTG 61.771 72.222 0.00 0.00 43.71 4.94
5274 8310 2.995574 CGGAGAACCCCTCGGTGT 60.996 66.667 0.00 0.00 43.71 4.16
5276 8312 1.003718 GGAGAACCCCTCGGTGTTG 60.004 63.158 0.00 0.00 43.71 3.33
5277 8313 1.671379 GAGAACCCCTCGGTGTTGC 60.671 63.158 0.00 0.00 43.71 4.17
5279 8315 1.228154 GAACCCCTCGGTGTTGCTT 60.228 57.895 0.00 0.00 43.71 3.91
5280 8316 0.035739 GAACCCCTCGGTGTTGCTTA 59.964 55.000 0.00 0.00 43.71 3.09
5281 8317 0.250597 AACCCCTCGGTGTTGCTTAC 60.251 55.000 0.00 0.00 43.71 2.34
5282 8318 1.373435 CCCCTCGGTGTTGCTTACA 59.627 57.895 0.00 0.00 0.00 2.41
5283 8319 0.250553 CCCCTCGGTGTTGCTTACAA 60.251 55.000 0.00 0.00 38.80 2.41
5284 8320 1.600023 CCCTCGGTGTTGCTTACAAA 58.400 50.000 0.00 0.00 38.80 2.83
5285 8321 1.950909 CCCTCGGTGTTGCTTACAAAA 59.049 47.619 0.00 0.00 38.80 2.44
5286 8322 2.287368 CCCTCGGTGTTGCTTACAAAAC 60.287 50.000 0.00 0.00 42.44 2.43
5287 8323 2.356382 CCTCGGTGTTGCTTACAAAACA 59.644 45.455 1.85 0.00 44.59 2.83
5288 8324 3.181495 CCTCGGTGTTGCTTACAAAACAA 60.181 43.478 1.85 0.00 44.59 2.83
5299 8335 5.358442 TGCTTACAAAACAATGTGTACCTGT 59.642 36.000 0.00 0.00 34.75 4.00
5305 8341 2.699954 ACAATGTGTACCTGTAGCAGC 58.300 47.619 0.00 0.00 0.00 5.25
5338 8377 1.683385 AGCACTTCTTCAAACTTGGCC 59.317 47.619 0.00 0.00 0.00 5.36
5360 8399 2.691409 TTTGAGGCCAGATAGGTTCG 57.309 50.000 5.01 0.00 40.61 3.95
5362 8401 1.300233 GAGGCCAGATAGGTTCGCG 60.300 63.158 5.01 0.00 40.61 5.87
5363 8402 2.280186 GGCCAGATAGGTTCGCGG 60.280 66.667 6.13 0.00 40.61 6.46
5367 8406 1.300233 CAGATAGGTTCGCGGGCTC 60.300 63.158 6.13 0.00 0.00 4.70
5368 8407 1.756950 AGATAGGTTCGCGGGCTCA 60.757 57.895 6.13 0.00 0.00 4.26
5377 8416 0.605319 TCGCGGGCTCAAGAAATGTT 60.605 50.000 6.13 0.00 0.00 2.71
5386 8425 3.057315 GCTCAAGAAATGTTAGCCTTGCA 60.057 43.478 0.00 0.00 36.77 4.08
5388 8427 5.125100 TCAAGAAATGTTAGCCTTGCAAG 57.875 39.130 19.93 19.93 36.77 4.01
5389 8428 4.584325 TCAAGAAATGTTAGCCTTGCAAGT 59.416 37.500 24.35 10.13 36.77 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.602009 TGATCAACTGCTTCAAGAATGATGAT 59.398 34.615 0.00 0.00 34.96 2.45
1 2 5.941647 TGATCAACTGCTTCAAGAATGATGA 59.058 36.000 0.00 0.00 34.96 2.92
2 3 6.093633 TCTGATCAACTGCTTCAAGAATGATG 59.906 38.462 0.00 0.00 34.96 3.07
3 4 6.178324 TCTGATCAACTGCTTCAAGAATGAT 58.822 36.000 0.00 0.00 34.96 2.45
4 5 5.554070 TCTGATCAACTGCTTCAAGAATGA 58.446 37.500 0.00 0.00 0.00 2.57
5 6 5.163744 CCTCTGATCAACTGCTTCAAGAATG 60.164 44.000 0.00 0.00 0.00 2.67
6 7 4.942483 CCTCTGATCAACTGCTTCAAGAAT 59.058 41.667 0.00 0.00 0.00 2.40
7 8 4.040829 TCCTCTGATCAACTGCTTCAAGAA 59.959 41.667 0.00 0.00 0.00 2.52
8 9 3.580022 TCCTCTGATCAACTGCTTCAAGA 59.420 43.478 0.00 0.00 0.00 3.02
9 10 3.683822 GTCCTCTGATCAACTGCTTCAAG 59.316 47.826 0.00 0.00 0.00 3.02
10 11 3.557898 GGTCCTCTGATCAACTGCTTCAA 60.558 47.826 0.00 0.00 0.00 2.69
11 12 2.027745 GGTCCTCTGATCAACTGCTTCA 60.028 50.000 0.00 0.00 0.00 3.02
12 13 2.235898 AGGTCCTCTGATCAACTGCTTC 59.764 50.000 0.00 0.00 0.00 3.86
13 14 2.235898 GAGGTCCTCTGATCAACTGCTT 59.764 50.000 12.02 0.00 0.00 3.91
14 15 1.830477 GAGGTCCTCTGATCAACTGCT 59.170 52.381 12.02 0.00 0.00 4.24
15 16 1.830477 AGAGGTCCTCTGATCAACTGC 59.170 52.381 21.21 0.00 39.62 4.40
25 26 2.569404 GTGTCAAATCCAGAGGTCCTCT 59.431 50.000 16.28 16.28 42.11 3.69
26 27 2.303022 TGTGTCAAATCCAGAGGTCCTC 59.697 50.000 11.31 11.31 0.00 3.71
27 28 2.338809 TGTGTCAAATCCAGAGGTCCT 58.661 47.619 0.00 0.00 0.00 3.85
28 29 2.859165 TGTGTCAAATCCAGAGGTCC 57.141 50.000 0.00 0.00 0.00 4.46
29 30 5.712152 AAATTGTGTCAAATCCAGAGGTC 57.288 39.130 0.00 0.00 0.00 3.85
30 31 7.781324 AATAAATTGTGTCAAATCCAGAGGT 57.219 32.000 0.00 0.00 0.00 3.85
31 32 7.546667 CCAAATAAATTGTGTCAAATCCAGAGG 59.453 37.037 0.00 0.00 37.32 3.69
32 33 7.063780 GCCAAATAAATTGTGTCAAATCCAGAG 59.936 37.037 0.00 0.00 37.32 3.35
52 53 0.685458 GAGACCTGGGCATGCCAAAT 60.685 55.000 36.56 18.04 37.98 2.32
94 95 2.747446 CCTAACAAACAATGGAGACCGG 59.253 50.000 0.00 0.00 0.00 5.28
187 188 4.148838 AGCTCACAGAGGATAGATACCAC 58.851 47.826 0.00 0.00 0.00 4.16
215 216 1.202580 CCTTTCTAGATGGTCCTGCCG 60.203 57.143 0.00 0.00 41.21 5.69
217 218 3.135530 ACATCCTTTCTAGATGGTCCTGC 59.864 47.826 10.82 0.00 44.45 4.85
220 221 3.711704 TCCACATCCTTTCTAGATGGTCC 59.288 47.826 10.82 0.00 44.45 4.46
262 263 0.869730 GCAACTGCAAAATGGGCTTG 59.130 50.000 0.00 0.00 41.59 4.01
275 276 2.320587 GCAGGTCCACGAGCAACTG 61.321 63.158 0.00 0.00 31.89 3.16
276 277 1.185618 TAGCAGGTCCACGAGCAACT 61.186 55.000 0.00 0.00 31.89 3.16
342 350 4.011698 TCATCCTCCACAATCATGTTGTG 58.988 43.478 23.21 23.21 46.79 3.33
381 389 4.811557 CGTATTCTCAAATTCCAGACCTCC 59.188 45.833 0.00 0.00 0.00 4.30
403 411 3.384789 TGGAAGTTGGATAGGATCACTCG 59.615 47.826 0.00 0.00 0.00 4.18
405 413 4.104086 TGTGGAAGTTGGATAGGATCACT 58.896 43.478 0.00 0.00 0.00 3.41
430 438 3.930848 ACTCGTTAAAGTGGCCTAATTCG 59.069 43.478 3.32 0.57 0.00 3.34
435 443 4.075963 ACAAACTCGTTAAAGTGGCCTA 57.924 40.909 3.32 0.00 0.00 3.93
436 444 2.927028 ACAAACTCGTTAAAGTGGCCT 58.073 42.857 3.32 0.00 0.00 5.19
437 445 3.065648 TGAACAAACTCGTTAAAGTGGCC 59.934 43.478 0.00 0.00 0.00 5.36
439 447 6.750039 ACATTTGAACAAACTCGTTAAAGTGG 59.250 34.615 2.03 0.00 33.39 4.00
467 475 1.428448 TGCTCGGTCTCGATTTGTTG 58.572 50.000 0.00 0.00 45.04 3.33
470 478 2.672874 TGATTTGCTCGGTCTCGATTTG 59.327 45.455 0.00 0.00 45.04 2.32
478 487 1.329906 CTGCTCATGATTTGCTCGGTC 59.670 52.381 0.00 0.00 0.00 4.79
502 511 7.278424 CCACGGATGCTTAATCAAATTTTCATT 59.722 33.333 0.00 0.00 36.98 2.57
550 559 6.682423 TTGAATTCAACTCACGCATATGAT 57.318 33.333 16.91 0.00 0.00 2.45
551 560 6.493449 TTTGAATTCAACTCACGCATATGA 57.507 33.333 20.35 0.00 35.28 2.15
618 627 4.607239 ACCCGAGAGTACTCCTAATTTCA 58.393 43.478 19.38 0.00 39.76 2.69
619 628 5.595257 AACCCGAGAGTACTCCTAATTTC 57.405 43.478 19.38 8.23 39.76 2.17
620 629 5.482878 TCAAACCCGAGAGTACTCCTAATTT 59.517 40.000 19.38 10.77 39.76 1.82
627 636 7.548075 TGAAAATATTCAAACCCGAGAGTACTC 59.452 37.037 15.41 15.41 42.47 2.59
652 661 1.946768 ACGGACACCATGTTTCACTTG 59.053 47.619 0.00 0.00 0.00 3.16
658 667 2.360801 CCTCAAAACGGACACCATGTTT 59.639 45.455 0.00 0.00 37.41 2.83
660 669 1.604604 CCTCAAAACGGACACCATGT 58.395 50.000 0.00 0.00 0.00 3.21
664 673 2.265904 GGGCCTCAAAACGGACACC 61.266 63.158 0.84 0.00 0.00 4.16
677 686 1.265454 AAAGAAGATCCGACGGGCCT 61.265 55.000 15.25 8.57 0.00 5.19
678 687 1.090052 CAAAGAAGATCCGACGGGCC 61.090 60.000 15.25 6.18 0.00 5.80
680 689 0.108138 AGCAAAGAAGATCCGACGGG 60.108 55.000 15.25 0.00 0.00 5.28
684 693 2.303022 AGGAACAGCAAAGAAGATCCGA 59.697 45.455 0.00 0.00 0.00 4.55
685 694 2.417933 CAGGAACAGCAAAGAAGATCCG 59.582 50.000 0.00 0.00 0.00 4.18
687 696 3.080319 AGCAGGAACAGCAAAGAAGATC 58.920 45.455 0.00 0.00 45.86 2.75
688 697 3.151912 AGCAGGAACAGCAAAGAAGAT 57.848 42.857 0.00 0.00 45.86 2.40
690 699 2.161211 GCTAGCAGGAACAGCAAAGAAG 59.839 50.000 10.63 0.00 45.86 2.85
691 700 2.154462 GCTAGCAGGAACAGCAAAGAA 58.846 47.619 10.63 0.00 45.86 2.52
692 701 1.813513 GCTAGCAGGAACAGCAAAGA 58.186 50.000 10.63 0.00 45.86 2.52
693 702 0.445436 CGCTAGCAGGAACAGCAAAG 59.555 55.000 16.45 0.00 45.86 2.77
695 704 0.250234 ATCGCTAGCAGGAACAGCAA 59.750 50.000 16.45 0.00 45.86 3.91
696 705 0.179100 GATCGCTAGCAGGAACAGCA 60.179 55.000 16.45 0.00 45.86 4.41
697 706 0.878086 GGATCGCTAGCAGGAACAGC 60.878 60.000 16.45 0.00 42.86 4.40
700 709 1.300233 CCGGATCGCTAGCAGGAAC 60.300 63.158 16.45 3.46 0.00 3.62
701 710 2.498941 CCCGGATCGCTAGCAGGAA 61.499 63.158 16.45 0.00 0.00 3.36
702 711 2.912542 CCCGGATCGCTAGCAGGA 60.913 66.667 16.45 5.04 0.00 3.86
704 713 2.028190 CACCCGGATCGCTAGCAG 59.972 66.667 16.45 7.87 0.00 4.24
706 715 2.336809 CTCACCCGGATCGCTAGC 59.663 66.667 0.73 4.06 0.00 3.42
709 718 2.363795 TTCCTCACCCGGATCGCT 60.364 61.111 0.73 0.00 32.02 4.93
710 719 2.202892 GTTCCTCACCCGGATCGC 60.203 66.667 0.73 0.00 32.02 4.58
713 722 1.903877 CTGCTGTTCCTCACCCGGAT 61.904 60.000 0.73 0.00 32.02 4.18
717 726 0.687354 TTCTCTGCTGTTCCTCACCC 59.313 55.000 0.00 0.00 0.00 4.61
718 727 1.620819 TCTTCTCTGCTGTTCCTCACC 59.379 52.381 0.00 0.00 0.00 4.02
719 728 3.520569 GATCTTCTCTGCTGTTCCTCAC 58.479 50.000 0.00 0.00 0.00 3.51
720 729 2.499289 GGATCTTCTCTGCTGTTCCTCA 59.501 50.000 0.00 0.00 0.00 3.86
732 2248 2.077821 GAGGCCCGTCGGATCTTCTC 62.078 65.000 14.39 8.02 0.00 2.87
838 2364 1.626825 GTGGGTTTGGAGCTGGTACTA 59.373 52.381 0.00 0.00 0.00 1.82
1284 2835 7.848051 CGACAGAGTATTAATCAAAGCACAATC 59.152 37.037 0.00 0.00 0.00 2.67
1339 2890 4.240103 CGGAGGGCGATGGATGCA 62.240 66.667 0.00 0.00 0.00 3.96
1341 2892 0.748005 AAAACGGAGGGCGATGGATG 60.748 55.000 0.00 0.00 0.00 3.51
1342 2893 0.463833 GAAAACGGAGGGCGATGGAT 60.464 55.000 0.00 0.00 0.00 3.41
1343 2894 1.078708 GAAAACGGAGGGCGATGGA 60.079 57.895 0.00 0.00 0.00 3.41
1344 2895 1.078426 AGAAAACGGAGGGCGATGG 60.078 57.895 0.00 0.00 0.00 3.51
1364 2915 6.439058 GCTCAGGTCCTACCATAATTAGAGAT 59.561 42.308 0.00 0.00 41.95 2.75
1380 2931 2.125350 CTCCGCAAGCTCAGGTCC 60.125 66.667 0.00 0.00 0.00 4.46
1381 2932 2.125350 CCTCCGCAAGCTCAGGTC 60.125 66.667 0.00 0.00 0.00 3.85
1382 2933 3.710722 CCCTCCGCAAGCTCAGGT 61.711 66.667 0.00 0.00 0.00 4.00
1383 2934 2.262774 AATCCCTCCGCAAGCTCAGG 62.263 60.000 0.00 0.00 0.00 3.86
1384 2935 1.094073 CAATCCCTCCGCAAGCTCAG 61.094 60.000 0.00 0.00 0.00 3.35
1385 2936 1.078214 CAATCCCTCCGCAAGCTCA 60.078 57.895 0.00 0.00 0.00 4.26
1386 2937 0.678048 AACAATCCCTCCGCAAGCTC 60.678 55.000 0.00 0.00 0.00 4.09
1387 2938 0.678048 GAACAATCCCTCCGCAAGCT 60.678 55.000 0.00 0.00 0.00 3.74
1388 2939 1.657751 GGAACAATCCCTCCGCAAGC 61.658 60.000 0.00 0.00 40.10 4.01
1389 2940 2.482326 GGAACAATCCCTCCGCAAG 58.518 57.895 0.00 0.00 40.10 4.01
1398 2949 7.010460 CACTCAAAAAGTCAAAAGGAACAATCC 59.990 37.037 0.00 0.00 40.45 3.01
1437 2989 5.131142 ACCAATCAATCTAGATTCCCGAACT 59.869 40.000 15.24 0.34 36.13 3.01
1488 3040 0.868406 GAGTGTCGACCCAAAAGCAG 59.132 55.000 14.12 0.00 0.00 4.24
1513 3065 5.501156 GAGAGGCTCCAAAAATCTCCTTTA 58.499 41.667 11.71 0.00 32.10 1.85
1518 3070 3.252974 TCGAGAGGCTCCAAAAATCTC 57.747 47.619 11.71 0.00 34.40 2.75
1571 3123 7.915508 TCAGATGTTGTGTAAACTGTAAAGTG 58.084 34.615 0.00 0.00 0.00 3.16
1646 3198 7.687941 ACTAATAATATCTTTTCCCATGGCG 57.312 36.000 6.09 0.00 0.00 5.69
1666 3218 7.822334 TGATCTCAATCGGCTTAAAGAAACTAA 59.178 33.333 0.00 0.00 34.39 2.24
1668 3220 6.173339 TGATCTCAATCGGCTTAAAGAAACT 58.827 36.000 0.00 0.00 34.39 2.66
1669 3221 6.422776 TGATCTCAATCGGCTTAAAGAAAC 57.577 37.500 0.00 0.00 34.39 2.78
1670 3222 7.011763 CAGATGATCTCAATCGGCTTAAAGAAA 59.988 37.037 0.00 0.00 34.39 2.52
1673 3225 5.757320 ACAGATGATCTCAATCGGCTTAAAG 59.243 40.000 0.00 0.00 34.39 1.85
1674 3226 5.525012 CACAGATGATCTCAATCGGCTTAAA 59.475 40.000 0.00 0.00 34.39 1.52
1675 3227 5.052481 CACAGATGATCTCAATCGGCTTAA 58.948 41.667 0.00 0.00 34.39 1.85
1692 3244 3.244215 ACATCGTCCAAACTGACACAGAT 60.244 43.478 5.76 0.00 34.88 2.90
1715 3267 3.256879 CACTCTGCTTCTGAACTGAGGTA 59.743 47.826 19.91 0.50 36.50 3.08
1759 3321 1.936547 TGGCGGTTGCATTTTTGTTTC 59.063 42.857 0.00 0.00 45.35 2.78
1774 3336 1.959042 ATATGCTGAGACTTTGGCGG 58.041 50.000 0.00 0.00 0.00 6.13
1879 3473 6.838401 AGAAGGATGTAATTCAAGAGGGAT 57.162 37.500 0.00 0.00 0.00 3.85
1891 3485 5.489792 AGACAAGAGCAAGAAGGATGTAA 57.510 39.130 0.00 0.00 0.00 2.41
2047 3641 2.584498 AGAGCAGGAATCCCCAAATTCT 59.416 45.455 0.00 0.00 36.19 2.40
2120 3714 7.608761 ACTGTACCAACTAGTCAAAAAGAACAA 59.391 33.333 0.00 0.00 0.00 2.83
2121 3715 7.107542 ACTGTACCAACTAGTCAAAAAGAACA 58.892 34.615 0.00 0.00 0.00 3.18
2122 3716 7.549615 ACTGTACCAACTAGTCAAAAAGAAC 57.450 36.000 0.00 0.00 0.00 3.01
2168 3765 6.531923 ACATTCATCAATCATGTAGGAGGAG 58.468 40.000 0.00 0.00 33.66 3.69
2189 3786 8.562949 AGGTATACCAAACTTGTATCCTACAT 57.437 34.615 23.87 0.00 37.18 2.29
2449 4049 2.818432 ACCGATATAGTTAGCCTCCACG 59.182 50.000 0.00 0.00 0.00 4.94
2558 4158 6.508030 AAAACCAATTATGTTTGTTCCCCT 57.492 33.333 6.15 0.00 36.14 4.79
3115 5723 7.771927 AGGAAATTGTTGAATCTCTTCATGT 57.228 32.000 0.00 0.00 40.95 3.21
3207 5818 5.104151 TCCCAACATAGCCATCAACTCAATA 60.104 40.000 0.00 0.00 0.00 1.90
3308 5919 9.321562 GTAAAAGGTAGGATCATTTCGATACAA 57.678 33.333 0.00 0.00 37.43 2.41
3315 5926 7.711339 ACGATGAGTAAAAGGTAGGATCATTTC 59.289 37.037 0.00 0.00 0.00 2.17
3429 6040 9.823647 ACTTCTGTAGTAATGTCAAGGAATATG 57.176 33.333 0.00 0.00 34.56 1.78
3497 6108 1.378124 GAGAGAGACTTACCGCGCCT 61.378 60.000 0.00 0.00 0.00 5.52
3623 6245 7.440523 ACTGGAGATGAACACAGTATTTTTC 57.559 36.000 0.00 0.00 41.95 2.29
3624 6246 8.918202 TTACTGGAGATGAACACAGTATTTTT 57.082 30.769 0.00 0.00 43.52 1.94
3625 6247 8.950210 CATTACTGGAGATGAACACAGTATTTT 58.050 33.333 0.00 0.00 43.52 1.82
3631 6253 6.427853 TGAAACATTACTGGAGATGAACACAG 59.572 38.462 0.00 0.00 37.01 3.66
3826 6449 0.392336 TTGCCCCACAAATCTGCAAC 59.608 50.000 0.00 0.00 37.04 4.17
3828 6451 1.470996 GGTTGCCCCACAAATCTGCA 61.471 55.000 0.00 0.00 40.82 4.41
4033 6656 2.725815 GTGCGCGAACAAACAGGC 60.726 61.111 13.73 0.00 0.00 4.85
4191 6814 0.035317 TGCGTGCAACCAGAGATCTT 59.965 50.000 0.00 0.00 0.00 2.40
4251 6874 0.462225 TACTCTGCTCGTCGCTAGCT 60.462 55.000 13.93 0.00 40.73 3.32
4254 6877 0.814410 CCCTACTCTGCTCGTCGCTA 60.814 60.000 0.00 0.00 40.11 4.26
4427 7051 4.506625 CCTCCCTGAGAATTGTTACAACCA 60.507 45.833 0.00 0.00 0.00 3.67
4432 7056 6.418946 AGATTTCCTCCCTGAGAATTGTTAC 58.581 40.000 0.00 0.00 0.00 2.50
4446 7070 5.124617 CCTTGCAGAAGTAAAGATTTCCTCC 59.875 44.000 0.00 0.00 0.00 4.30
4463 7087 0.251519 AGGCTTCCCTTTCCTTGCAG 60.252 55.000 0.00 0.00 38.74 4.41
4465 7089 0.540597 ACAGGCTTCCCTTTCCTTGC 60.541 55.000 0.00 0.00 40.33 4.01
4470 7094 0.402121 ACTGGACAGGCTTCCCTTTC 59.598 55.000 11.55 0.00 40.33 2.62
4479 7103 1.668419 ATATCGCAAACTGGACAGGC 58.332 50.000 4.14 0.00 0.00 4.85
4493 7117 6.633668 ACAACGAGAAGAAAGTCAATATCG 57.366 37.500 0.00 0.00 35.21 2.92
4499 7123 9.284594 CAAAATTTTACAACGAGAAGAAAGTCA 57.715 29.630 2.44 0.00 0.00 3.41
4537 7161 7.435192 GGCAGAAAATCTCGAAAGAAAGAAAAA 59.565 33.333 0.00 0.00 41.32 1.94
4538 7162 6.918022 GGCAGAAAATCTCGAAAGAAAGAAAA 59.082 34.615 0.00 0.00 41.32 2.29
4539 7163 6.263168 AGGCAGAAAATCTCGAAAGAAAGAAA 59.737 34.615 0.00 0.00 41.32 2.52
4565 7189 8.718102 TTGCTAAACTCAGTTAGATATTGTCC 57.282 34.615 0.00 0.00 33.62 4.02
4578 7202 4.201990 GGGCTGAATGATTGCTAAACTCAG 60.202 45.833 0.00 0.00 33.54 3.35
4630 7254 7.882179 AGTCATACATCAATACACAGCGTATA 58.118 34.615 0.00 0.00 40.04 1.47
4634 7258 5.043248 TGAGTCATACATCAATACACAGCG 58.957 41.667 0.00 0.00 0.00 5.18
4646 7270 4.903649 TCCCATCTGATGTGAGTCATACAT 59.096 41.667 15.95 0.00 41.21 2.29
4656 7280 6.548622 ACCATTTCTTATTCCCATCTGATGTG 59.451 38.462 15.95 5.35 0.00 3.21
4664 7288 4.870636 TCTGCACCATTTCTTATTCCCAT 58.129 39.130 0.00 0.00 0.00 4.00
4674 7298 6.060788 AGGAGAGATAATTCTGCACCATTTC 58.939 40.000 0.00 0.00 37.93 2.17
4682 7306 7.336931 TGGTAAAACAAGGAGAGATAATTCTGC 59.663 37.037 0.00 0.00 35.95 4.26
4701 7325 8.481492 AGCATATGATGGATCATTTGGTAAAA 57.519 30.769 17.69 0.00 46.99 1.52
4722 7408 8.644216 TGCATTCCTTTCAATATATTTCAGCAT 58.356 29.630 0.00 0.00 0.00 3.79
4723 7409 8.009622 TGCATTCCTTTCAATATATTTCAGCA 57.990 30.769 0.00 0.00 0.00 4.41
4724 7410 8.355169 TCTGCATTCCTTTCAATATATTTCAGC 58.645 33.333 0.00 0.00 0.00 4.26
4738 7766 8.133627 CGAATATTTCTCATTCTGCATTCCTTT 58.866 33.333 0.00 0.00 31.49 3.11
4751 7779 6.922957 GCTCTCTTCTCACGAATATTTCTCAT 59.077 38.462 0.00 0.00 0.00 2.90
4752 7780 6.127619 TGCTCTCTTCTCACGAATATTTCTCA 60.128 38.462 0.00 0.00 0.00 3.27
4762 7790 5.989168 TGTTAAAATTGCTCTCTTCTCACGA 59.011 36.000 0.00 0.00 0.00 4.35
4763 7791 6.228273 TGTTAAAATTGCTCTCTTCTCACG 57.772 37.500 0.00 0.00 0.00 4.35
4765 7793 6.432162 AGCATGTTAAAATTGCTCTCTTCTCA 59.568 34.615 0.00 0.00 42.88 3.27
4766 7794 6.850555 AGCATGTTAAAATTGCTCTCTTCTC 58.149 36.000 0.00 0.00 42.88 2.87
4767 7795 6.830873 AGCATGTTAAAATTGCTCTCTTCT 57.169 33.333 0.00 0.00 42.88 2.85
4775 7803 4.725790 AGAGGGAGCATGTTAAAATTGC 57.274 40.909 0.00 0.00 36.63 3.56
4776 7804 6.378280 AGGTAAGAGGGAGCATGTTAAAATTG 59.622 38.462 0.00 0.00 0.00 2.32
4777 7805 6.494059 AGGTAAGAGGGAGCATGTTAAAATT 58.506 36.000 0.00 0.00 0.00 1.82
4778 7806 6.079712 AGGTAAGAGGGAGCATGTTAAAAT 57.920 37.500 0.00 0.00 0.00 1.82
4779 7807 5.497474 GAGGTAAGAGGGAGCATGTTAAAA 58.503 41.667 0.00 0.00 0.00 1.52
4780 7808 4.080526 GGAGGTAAGAGGGAGCATGTTAAA 60.081 45.833 0.00 0.00 0.00 1.52
4781 7809 3.454812 GGAGGTAAGAGGGAGCATGTTAA 59.545 47.826 0.00 0.00 0.00 2.01
4782 7810 3.039011 GGAGGTAAGAGGGAGCATGTTA 58.961 50.000 0.00 0.00 0.00 2.41
4783 7811 1.840635 GGAGGTAAGAGGGAGCATGTT 59.159 52.381 0.00 0.00 0.00 2.71
4784 7812 1.008938 AGGAGGTAAGAGGGAGCATGT 59.991 52.381 0.00 0.00 0.00 3.21
4785 7813 1.691434 GAGGAGGTAAGAGGGAGCATG 59.309 57.143 0.00 0.00 0.00 4.06
4786 7814 1.578215 AGAGGAGGTAAGAGGGAGCAT 59.422 52.381 0.00 0.00 0.00 3.79
4787 7815 1.011595 AGAGGAGGTAAGAGGGAGCA 58.988 55.000 0.00 0.00 0.00 4.26
4788 7816 2.168458 AAGAGGAGGTAAGAGGGAGC 57.832 55.000 0.00 0.00 0.00 4.70
4789 7817 4.081365 GTGAAAAGAGGAGGTAAGAGGGAG 60.081 50.000 0.00 0.00 0.00 4.30
4790 7818 3.838903 GTGAAAAGAGGAGGTAAGAGGGA 59.161 47.826 0.00 0.00 0.00 4.20
4791 7819 3.583086 TGTGAAAAGAGGAGGTAAGAGGG 59.417 47.826 0.00 0.00 0.00 4.30
4792 7820 4.891992 TGTGAAAAGAGGAGGTAAGAGG 57.108 45.455 0.00 0.00 0.00 3.69
4793 7821 6.381420 TCCTATGTGAAAAGAGGAGGTAAGAG 59.619 42.308 0.00 0.00 33.05 2.85
4794 7822 6.261435 TCCTATGTGAAAAGAGGAGGTAAGA 58.739 40.000 0.00 0.00 33.05 2.10
4795 7823 6.546428 TCCTATGTGAAAAGAGGAGGTAAG 57.454 41.667 0.00 0.00 33.05 2.34
4801 7829 8.609617 TTCTTATCTCCTATGTGAAAAGAGGA 57.390 34.615 0.00 0.00 36.64 3.71
4802 7830 7.930865 CCTTCTTATCTCCTATGTGAAAAGAGG 59.069 40.741 0.00 0.00 0.00 3.69
4803 7831 8.482128 ACCTTCTTATCTCCTATGTGAAAAGAG 58.518 37.037 0.00 0.00 0.00 2.85
4804 7832 8.380742 ACCTTCTTATCTCCTATGTGAAAAGA 57.619 34.615 0.00 0.00 0.00 2.52
4805 7833 9.535878 GTACCTTCTTATCTCCTATGTGAAAAG 57.464 37.037 0.00 0.00 0.00 2.27
4806 7834 9.268282 AGTACCTTCTTATCTCCTATGTGAAAA 57.732 33.333 0.00 0.00 0.00 2.29
4807 7835 8.840200 AGTACCTTCTTATCTCCTATGTGAAA 57.160 34.615 0.00 0.00 0.00 2.69
4808 7836 7.506261 GGAGTACCTTCTTATCTCCTATGTGAA 59.494 40.741 0.00 0.00 40.78 3.18
4809 7837 7.005296 GGAGTACCTTCTTATCTCCTATGTGA 58.995 42.308 0.00 0.00 40.78 3.58
4810 7838 6.209788 GGGAGTACCTTCTTATCTCCTATGTG 59.790 46.154 8.97 0.00 42.76 3.21
4811 7839 6.316513 GGGAGTACCTTCTTATCTCCTATGT 58.683 44.000 8.97 0.00 42.76 2.29
4812 7840 6.844097 GGGAGTACCTTCTTATCTCCTATG 57.156 45.833 8.97 0.00 42.76 2.23
4827 7855 9.984190 CTTATATTTAGAAACAGAGGGAGTACC 57.016 37.037 0.00 0.00 40.67 3.34
4830 7858 8.706521 GGTCTTATATTTAGAAACAGAGGGAGT 58.293 37.037 0.00 0.00 0.00 3.85
4831 7859 8.929487 AGGTCTTATATTTAGAAACAGAGGGAG 58.071 37.037 0.00 0.00 0.00 4.30
4832 7860 8.855804 AGGTCTTATATTTAGAAACAGAGGGA 57.144 34.615 0.00 0.00 0.00 4.20
4833 7861 9.907229 AAAGGTCTTATATTTAGAAACAGAGGG 57.093 33.333 0.00 0.00 0.00 4.30
4850 7878 8.736244 CCGAATTGAAATTCCTAAAAGGTCTTA 58.264 33.333 9.59 0.00 41.30 2.10
4851 7879 7.450323 TCCGAATTGAAATTCCTAAAAGGTCTT 59.550 33.333 9.59 0.00 41.30 3.01
4852 7880 6.946009 TCCGAATTGAAATTCCTAAAAGGTCT 59.054 34.615 9.59 0.00 41.30 3.85
4853 7881 7.027760 GTCCGAATTGAAATTCCTAAAAGGTC 58.972 38.462 9.59 0.45 41.30 3.85
4854 7882 6.719829 AGTCCGAATTGAAATTCCTAAAAGGT 59.280 34.615 9.59 0.00 41.30 3.50
4855 7883 7.158099 AGTCCGAATTGAAATTCCTAAAAGG 57.842 36.000 9.59 4.98 41.30 3.11
4896 7924 6.366332 ACGAAGTGAAATGAGTGAATCTACAC 59.634 38.462 0.00 0.00 42.51 2.90
4897 7925 6.455647 ACGAAGTGAAATGAGTGAATCTACA 58.544 36.000 0.00 0.00 42.51 2.74
4898 7926 6.952935 ACGAAGTGAAATGAGTGAATCTAC 57.047 37.500 0.00 0.00 42.51 2.59
4899 7927 7.222805 GCATACGAAGTGAAATGAGTGAATCTA 59.777 37.037 0.00 0.00 45.73 1.98
4900 7928 6.036517 GCATACGAAGTGAAATGAGTGAATCT 59.963 38.462 0.00 0.00 45.73 2.40
4901 7929 6.183360 TGCATACGAAGTGAAATGAGTGAATC 60.183 38.462 0.00 0.00 45.73 2.52
4902 7930 5.643348 TGCATACGAAGTGAAATGAGTGAAT 59.357 36.000 0.00 0.00 45.73 2.57
4903 7931 4.994217 TGCATACGAAGTGAAATGAGTGAA 59.006 37.500 0.00 0.00 45.73 3.18
4904 7932 4.565022 TGCATACGAAGTGAAATGAGTGA 58.435 39.130 0.00 0.00 45.73 3.41
4905 7933 4.389992 ACTGCATACGAAGTGAAATGAGTG 59.610 41.667 0.00 0.00 45.73 3.51
4906 7934 4.569943 ACTGCATACGAAGTGAAATGAGT 58.430 39.130 0.00 0.00 45.73 3.41
4907 7935 5.120674 TGAACTGCATACGAAGTGAAATGAG 59.879 40.000 0.00 0.00 45.73 2.90
4908 7936 4.994217 TGAACTGCATACGAAGTGAAATGA 59.006 37.500 0.00 0.00 45.73 2.57
4909 7937 5.281693 TGAACTGCATACGAAGTGAAATG 57.718 39.130 0.00 0.00 45.73 2.32
4910 7938 7.792374 ATATGAACTGCATACGAAGTGAAAT 57.208 32.000 0.00 0.00 45.73 2.17
4911 7939 7.413988 CCAATATGAACTGCATACGAAGTGAAA 60.414 37.037 0.00 0.00 45.73 2.69
4912 7940 6.037062 CCAATATGAACTGCATACGAAGTGAA 59.963 38.462 0.00 0.00 45.73 3.18
4913 7941 5.523552 CCAATATGAACTGCATACGAAGTGA 59.476 40.000 0.00 0.00 45.73 3.41
4914 7942 5.523552 TCCAATATGAACTGCATACGAAGTG 59.476 40.000 0.00 0.00 45.73 3.16
4916 7944 6.603237 TTCCAATATGAACTGCATACGAAG 57.397 37.500 0.00 0.00 42.01 3.79
4917 7945 6.992123 AGATTCCAATATGAACTGCATACGAA 59.008 34.615 0.00 0.00 42.01 3.85
4918 7946 6.524734 AGATTCCAATATGAACTGCATACGA 58.475 36.000 0.00 0.00 42.01 3.43
4919 7947 6.648310 AGAGATTCCAATATGAACTGCATACG 59.352 38.462 0.00 0.00 42.01 3.06
4920 7948 7.976135 AGAGATTCCAATATGAACTGCATAC 57.024 36.000 0.00 0.00 42.01 2.39
4921 7949 9.093458 TCTAGAGATTCCAATATGAACTGCATA 57.907 33.333 0.00 0.00 43.28 3.14
4922 7950 7.971201 TCTAGAGATTCCAATATGAACTGCAT 58.029 34.615 0.00 0.00 41.08 3.96
4923 7951 7.365497 TCTAGAGATTCCAATATGAACTGCA 57.635 36.000 0.00 0.00 0.00 4.41
4924 7952 8.147058 TCTTCTAGAGATTCCAATATGAACTGC 58.853 37.037 0.00 0.00 0.00 4.40
4948 7976 9.736819 CCCCCTCTATTCCTAAATATAAGATCT 57.263 37.037 0.00 0.00 0.00 2.75
4971 7999 4.264038 TGGGTTTGATTAACTCTTACCCCC 60.264 45.833 0.00 0.00 42.71 5.40
4972 8000 4.703575 GTGGGTTTGATTAACTCTTACCCC 59.296 45.833 0.00 0.00 42.71 4.95
4973 8001 5.567430 AGTGGGTTTGATTAACTCTTACCC 58.433 41.667 0.00 0.00 43.21 3.69
4974 8002 8.803397 AATAGTGGGTTTGATTAACTCTTACC 57.197 34.615 0.00 0.00 38.12 2.85
4979 8007 9.516314 GCATTTAATAGTGGGTTTGATTAACTC 57.484 33.333 0.00 0.00 37.76 3.01
4980 8008 9.030452 TGCATTTAATAGTGGGTTTGATTAACT 57.970 29.630 0.00 0.00 36.93 2.24
4981 8009 9.646427 TTGCATTTAATAGTGGGTTTGATTAAC 57.354 29.630 0.00 0.00 35.94 2.01
4982 8010 9.646427 GTTGCATTTAATAGTGGGTTTGATTAA 57.354 29.630 0.00 0.00 0.00 1.40
4983 8011 8.807118 TGTTGCATTTAATAGTGGGTTTGATTA 58.193 29.630 0.00 0.00 0.00 1.75
4984 8012 7.675062 TGTTGCATTTAATAGTGGGTTTGATT 58.325 30.769 0.00 0.00 0.00 2.57
4985 8013 7.238486 TGTTGCATTTAATAGTGGGTTTGAT 57.762 32.000 0.00 0.00 0.00 2.57
4986 8014 6.656632 TGTTGCATTTAATAGTGGGTTTGA 57.343 33.333 0.00 0.00 0.00 2.69
4987 8015 6.128956 CGTTGTTGCATTTAATAGTGGGTTTG 60.129 38.462 0.00 0.00 0.00 2.93
4988 8016 5.923684 CGTTGTTGCATTTAATAGTGGGTTT 59.076 36.000 0.00 0.00 0.00 3.27
4989 8017 5.465935 CGTTGTTGCATTTAATAGTGGGTT 58.534 37.500 0.00 0.00 0.00 4.11
4990 8018 4.082463 CCGTTGTTGCATTTAATAGTGGGT 60.082 41.667 0.00 0.00 0.00 4.51
4991 8019 4.420168 CCGTTGTTGCATTTAATAGTGGG 58.580 43.478 0.00 0.00 0.00 4.61
4992 8020 3.857093 GCCGTTGTTGCATTTAATAGTGG 59.143 43.478 0.00 0.00 0.00 4.00
4993 8021 4.732784 AGCCGTTGTTGCATTTAATAGTG 58.267 39.130 0.00 0.00 0.00 2.74
4994 8022 5.385509 AAGCCGTTGTTGCATTTAATAGT 57.614 34.783 0.00 0.00 0.00 2.12
4995 8023 6.252655 GGTAAAGCCGTTGTTGCATTTAATAG 59.747 38.462 0.00 0.00 0.00 1.73
4996 8024 6.071840 AGGTAAAGCCGTTGTTGCATTTAATA 60.072 34.615 0.00 0.00 43.70 0.98
4997 8025 4.926832 GGTAAAGCCGTTGTTGCATTTAAT 59.073 37.500 0.00 0.00 0.00 1.40
4998 8026 4.038162 AGGTAAAGCCGTTGTTGCATTTAA 59.962 37.500 0.00 0.00 43.70 1.52
4999 8027 3.570550 AGGTAAAGCCGTTGTTGCATTTA 59.429 39.130 0.00 0.00 43.70 1.40
5000 8028 2.364002 AGGTAAAGCCGTTGTTGCATTT 59.636 40.909 0.00 0.00 43.70 2.32
5001 8029 1.960689 AGGTAAAGCCGTTGTTGCATT 59.039 42.857 0.00 0.00 43.70 3.56
5002 8030 1.616159 AGGTAAAGCCGTTGTTGCAT 58.384 45.000 0.00 0.00 43.70 3.96
5003 8031 1.394618 AAGGTAAAGCCGTTGTTGCA 58.605 45.000 0.00 0.00 43.70 4.08
5004 8032 2.223618 TGAAAGGTAAAGCCGTTGTTGC 60.224 45.455 0.00 0.00 43.70 4.17
5005 8033 3.701532 TGAAAGGTAAAGCCGTTGTTG 57.298 42.857 0.00 0.00 43.70 3.33
5006 8034 3.634910 ACATGAAAGGTAAAGCCGTTGTT 59.365 39.130 0.00 0.00 43.70 2.83
5007 8035 3.004315 CACATGAAAGGTAAAGCCGTTGT 59.996 43.478 0.00 0.00 43.70 3.32
5008 8036 3.252215 TCACATGAAAGGTAAAGCCGTTG 59.748 43.478 0.00 0.00 43.70 4.10
5009 8037 3.482436 TCACATGAAAGGTAAAGCCGTT 58.518 40.909 0.00 0.00 43.70 4.44
5010 8038 3.134574 TCACATGAAAGGTAAAGCCGT 57.865 42.857 0.00 0.00 43.70 5.68
5011 8039 4.497473 TTTCACATGAAAGGTAAAGCCG 57.503 40.909 0.00 0.00 43.70 5.52
5012 8040 5.230182 CCTTTTCACATGAAAGGTAAAGCC 58.770 41.667 13.73 0.00 43.90 4.35
5013 8041 5.230182 CCCTTTTCACATGAAAGGTAAAGC 58.770 41.667 18.29 0.00 43.90 3.51
5014 8042 5.538433 TCCCCTTTTCACATGAAAGGTAAAG 59.462 40.000 18.29 11.12 43.90 1.85
5015 8043 5.459505 TCCCCTTTTCACATGAAAGGTAAA 58.540 37.500 18.29 5.56 43.90 2.01
5016 8044 5.068215 TCCCCTTTTCACATGAAAGGTAA 57.932 39.130 18.29 7.41 43.90 2.85
5017 8045 4.508405 CCTCCCCTTTTCACATGAAAGGTA 60.508 45.833 18.29 8.95 43.90 3.08
5018 8046 3.500343 CTCCCCTTTTCACATGAAAGGT 58.500 45.455 18.29 0.00 43.90 3.50
5019 8047 2.827921 CCTCCCCTTTTCACATGAAAGG 59.172 50.000 14.63 14.63 43.90 3.11
5020 8048 3.500343 ACCTCCCCTTTTCACATGAAAG 58.500 45.455 0.00 0.00 43.90 2.62
5021 8049 3.611025 ACCTCCCCTTTTCACATGAAA 57.389 42.857 0.00 2.89 41.77 2.69
5022 8050 4.352595 TCTTACCTCCCCTTTTCACATGAA 59.647 41.667 0.00 0.00 0.00 2.57
5023 8051 3.913799 TCTTACCTCCCCTTTTCACATGA 59.086 43.478 0.00 0.00 0.00 3.07
5024 8052 4.265073 CTCTTACCTCCCCTTTTCACATG 58.735 47.826 0.00 0.00 0.00 3.21
5025 8053 3.267031 CCTCTTACCTCCCCTTTTCACAT 59.733 47.826 0.00 0.00 0.00 3.21
5026 8054 2.642807 CCTCTTACCTCCCCTTTTCACA 59.357 50.000 0.00 0.00 0.00 3.58
5027 8055 2.026169 CCCTCTTACCTCCCCTTTTCAC 60.026 54.545 0.00 0.00 0.00 3.18
5028 8056 2.157911 TCCCTCTTACCTCCCCTTTTCA 60.158 50.000 0.00 0.00 0.00 2.69
5029 8057 2.506231 CTCCCTCTTACCTCCCCTTTTC 59.494 54.545 0.00 0.00 0.00 2.29
5030 8058 2.563406 CTCCCTCTTACCTCCCCTTTT 58.437 52.381 0.00 0.00 0.00 2.27
5031 8059 1.906692 GCTCCCTCTTACCTCCCCTTT 60.907 57.143 0.00 0.00 0.00 3.11
5032 8060 0.326713 GCTCCCTCTTACCTCCCCTT 60.327 60.000 0.00 0.00 0.00 3.95
5033 8061 1.315216 GCTCCCTCTTACCTCCCCT 59.685 63.158 0.00 0.00 0.00 4.79
5034 8062 0.400670 ATGCTCCCTCTTACCTCCCC 60.401 60.000 0.00 0.00 0.00 4.81
5035 8063 0.761802 CATGCTCCCTCTTACCTCCC 59.238 60.000 0.00 0.00 0.00 4.30
5036 8064 1.501582 ACATGCTCCCTCTTACCTCC 58.498 55.000 0.00 0.00 0.00 4.30
5037 8065 4.755266 TTAACATGCTCCCTCTTACCTC 57.245 45.455 0.00 0.00 0.00 3.85
5038 8066 5.514500 TTTTAACATGCTCCCTCTTACCT 57.486 39.130 0.00 0.00 0.00 3.08
5058 8086 2.870411 CGGTTCTTCTCACGAGGTTTTT 59.130 45.455 0.00 0.00 0.00 1.94
5059 8087 2.159000 ACGGTTCTTCTCACGAGGTTTT 60.159 45.455 0.00 0.00 0.00 2.43
5060 8088 1.411612 ACGGTTCTTCTCACGAGGTTT 59.588 47.619 0.00 0.00 0.00 3.27
5061 8089 1.038280 ACGGTTCTTCTCACGAGGTT 58.962 50.000 0.00 0.00 0.00 3.50
5062 8090 1.901591 TACGGTTCTTCTCACGAGGT 58.098 50.000 0.00 0.00 0.00 3.85
5063 8091 2.422479 TCATACGGTTCTTCTCACGAGG 59.578 50.000 0.00 0.00 0.00 4.63
5064 8092 3.374367 TCTCATACGGTTCTTCTCACGAG 59.626 47.826 0.00 0.00 0.00 4.18
5065 8093 3.340928 TCTCATACGGTTCTTCTCACGA 58.659 45.455 0.00 0.00 0.00 4.35
5066 8094 3.487711 CCTCTCATACGGTTCTTCTCACG 60.488 52.174 0.00 0.00 0.00 4.35
5067 8095 3.695060 TCCTCTCATACGGTTCTTCTCAC 59.305 47.826 0.00 0.00 0.00 3.51
5068 8096 3.948473 CTCCTCTCATACGGTTCTTCTCA 59.052 47.826 0.00 0.00 0.00 3.27
5077 8105 2.500229 GTCCTCTCTCCTCTCATACGG 58.500 57.143 0.00 0.00 0.00 4.02
5087 8115 1.220477 GCTGCTTGGTCCTCTCTCC 59.780 63.158 0.00 0.00 0.00 3.71
5123 8151 4.338118 TCTCAAGACGGAGCATTTTGTTTT 59.662 37.500 0.00 0.00 34.84 2.43
5138 8166 6.981722 ACCATAACAAACCAAATCTCAAGAC 58.018 36.000 0.00 0.00 0.00 3.01
5155 8183 3.000727 CCAAGTGACCGAGAACCATAAC 58.999 50.000 0.00 0.00 0.00 1.89
5159 8187 0.391597 GACCAAGTGACCGAGAACCA 59.608 55.000 0.00 0.00 0.00 3.67
5160 8188 0.320508 GGACCAAGTGACCGAGAACC 60.321 60.000 0.00 0.00 0.00 3.62
5166 8194 1.227823 TTGCAGGACCAAGTGACCG 60.228 57.895 0.00 0.00 0.00 4.79
5169 8197 1.228245 GCCTTGCAGGACCAAGTGA 60.228 57.895 0.00 0.00 40.40 3.41
5174 8202 1.719063 AAGGAAGCCTTGCAGGACCA 61.719 55.000 0.00 0.00 42.96 4.02
5175 8203 1.075659 AAGGAAGCCTTGCAGGACC 59.924 57.895 0.00 2.08 42.96 4.46
5194 8223 2.293399 ACGGTGGCTTCAGTGAAAATTC 59.707 45.455 7.06 0.00 0.00 2.17
5205 8235 0.814010 ATGGCGATAACGGTGGCTTC 60.814 55.000 0.00 0.00 40.15 3.86
5208 8238 1.092921 TCAATGGCGATAACGGTGGC 61.093 55.000 0.00 0.00 40.15 5.01
5214 8244 4.795970 AGTTTCGATCAATGGCGATAAC 57.204 40.909 0.00 0.00 36.31 1.89
5223 8253 3.355378 TGCCATGGAAGTTTCGATCAAT 58.645 40.909 18.40 0.00 0.00 2.57
5226 8256 3.848272 TTTGCCATGGAAGTTTCGATC 57.152 42.857 18.40 0.00 0.00 3.69
5227 8257 4.599047 TTTTTGCCATGGAAGTTTCGAT 57.401 36.364 18.40 0.00 0.00 3.59
5229 8259 4.511082 ACAATTTTTGCCATGGAAGTTTCG 59.489 37.500 18.40 0.00 0.00 3.46
5230 8260 7.148423 GGATACAATTTTTGCCATGGAAGTTTC 60.148 37.037 18.40 2.71 0.00 2.78
5233 8263 5.338300 GGGATACAATTTTTGCCATGGAAGT 60.338 40.000 18.40 0.00 39.74 3.01
5234 8264 5.118286 GGGATACAATTTTTGCCATGGAAG 58.882 41.667 18.40 0.00 39.74 3.46
5236 8266 3.131933 CGGGATACAATTTTTGCCATGGA 59.868 43.478 18.40 0.00 39.74 3.41
5238 8268 3.131933 TCCGGGATACAATTTTTGCCATG 59.868 43.478 0.00 0.00 39.74 3.66
5239 8269 3.370104 TCCGGGATACAATTTTTGCCAT 58.630 40.909 0.00 0.00 39.74 4.40
5243 8279 4.142249 GGGTTCTCCGGGATACAATTTTTG 60.142 45.833 0.00 0.00 39.74 2.44
5249 8285 0.043637 AGGGGTTCTCCGGGATACAA 59.956 55.000 0.00 0.00 39.74 2.41
5267 8303 3.684103 TGTTTTGTAAGCAACACCGAG 57.316 42.857 0.00 0.00 38.00 4.63
5269 8305 4.026968 CACATTGTTTTGTAAGCAACACCG 60.027 41.667 0.00 0.00 38.00 4.94
5270 8306 4.867608 ACACATTGTTTTGTAAGCAACACC 59.132 37.500 0.00 0.00 38.00 4.16
5271 8307 6.020201 GGTACACATTGTTTTGTAAGCAACAC 60.020 38.462 0.00 0.00 38.00 3.32
5272 8308 6.037098 GGTACACATTGTTTTGTAAGCAACA 58.963 36.000 0.00 0.00 33.82 3.33
5273 8309 6.198216 CAGGTACACATTGTTTTGTAAGCAAC 59.802 38.462 0.00 0.00 33.82 4.17
5274 8310 6.127591 ACAGGTACACATTGTTTTGTAAGCAA 60.128 34.615 0.00 0.00 30.08 3.91
5276 8312 5.827666 ACAGGTACACATTGTTTTGTAAGC 58.172 37.500 0.00 0.00 30.08 3.09
5277 8313 7.075741 GCTACAGGTACACATTGTTTTGTAAG 58.924 38.462 0.00 0.00 30.08 2.34
5279 8315 6.056236 TGCTACAGGTACACATTGTTTTGTA 58.944 36.000 0.00 0.00 0.00 2.41
5280 8316 4.884744 TGCTACAGGTACACATTGTTTTGT 59.115 37.500 0.00 0.00 0.00 2.83
5281 8317 5.431420 TGCTACAGGTACACATTGTTTTG 57.569 39.130 0.00 0.00 0.00 2.44
5282 8318 4.023193 GCTGCTACAGGTACACATTGTTTT 60.023 41.667 0.00 0.00 31.21 2.43
5283 8319 3.502211 GCTGCTACAGGTACACATTGTTT 59.498 43.478 0.00 0.00 31.21 2.83
5284 8320 3.074412 GCTGCTACAGGTACACATTGTT 58.926 45.455 0.00 0.00 31.21 2.83
5285 8321 2.303022 AGCTGCTACAGGTACACATTGT 59.697 45.455 0.00 0.00 40.59 2.71
5286 8322 2.932614 GAGCTGCTACAGGTACACATTG 59.067 50.000 0.15 0.00 42.53 2.82
5287 8323 2.567169 TGAGCTGCTACAGGTACACATT 59.433 45.455 0.15 0.00 42.53 2.71
5288 8324 2.179427 TGAGCTGCTACAGGTACACAT 58.821 47.619 0.15 0.00 42.53 3.21
5317 8353 2.101415 GGCCAAGTTTGAAGAAGTGCTT 59.899 45.455 0.00 0.00 40.25 3.91
5318 8354 1.683385 GGCCAAGTTTGAAGAAGTGCT 59.317 47.619 0.00 0.00 0.00 4.40
5319 8355 1.600413 CGGCCAAGTTTGAAGAAGTGC 60.600 52.381 2.24 0.00 0.00 4.40
5320 8356 1.946768 TCGGCCAAGTTTGAAGAAGTG 59.053 47.619 2.24 0.00 0.00 3.16
5321 8357 2.341846 TCGGCCAAGTTTGAAGAAGT 57.658 45.000 2.24 0.00 0.00 3.01
5336 8375 1.517242 CTATCTGGCCTCAAATCGGC 58.483 55.000 3.32 0.00 46.83 5.54
5338 8377 2.918712 ACCTATCTGGCCTCAAATCG 57.081 50.000 3.32 0.00 40.22 3.34
5360 8399 1.202188 GCTAACATTTCTTGAGCCCGC 60.202 52.381 0.00 0.00 0.00 6.13
5367 8406 4.874970 ACTTGCAAGGCTAACATTTCTTG 58.125 39.130 29.18 0.51 39.46 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.