Multiple sequence alignment - TraesCS7D01G262100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G262100 chr7D 100.000 4061 0 0 1 4061 239776827 239772767 0.000000e+00 7500.0
1 TraesCS7D01G262100 chr7D 90.217 184 16 2 1 182 221462740 221462923 5.250000e-59 239.0
2 TraesCS7D01G262100 chr7D 89.785 186 15 3 1 182 95263630 95263445 6.790000e-58 235.0
3 TraesCS7D01G262100 chr7D 89.617 183 13 5 3730 3911 26554110 26553933 1.140000e-55 228.0
4 TraesCS7D01G262100 chr7D 89.011 182 18 2 3730 3911 14938396 14938217 1.470000e-54 224.0
5 TraesCS7D01G262100 chr7D 79.228 337 57 11 308 636 149736437 149736106 5.280000e-54 222.0
6 TraesCS7D01G262100 chr7D 98.485 66 1 0 217 282 309294987 309294922 2.560000e-22 117.0
7 TraesCS7D01G262100 chr7D 83.206 131 17 4 156 281 73528888 73528758 9.220000e-22 115.0
8 TraesCS7D01G262100 chr7D 97.015 67 2 0 217 283 488888492 488888558 3.320000e-21 113.0
9 TraesCS7D01G262100 chr7D 92.308 78 1 2 158 230 289162845 289162922 5.550000e-19 106.0
10 TraesCS7D01G262100 chr7D 90.909 77 3 1 158 230 375785711 375785635 2.580000e-17 100.0
11 TraesCS7D01G262100 chr7D 84.848 99 13 2 2360 2457 624914070 624914167 9.290000e-17 99.0
12 TraesCS7D01G262100 chr7D 84.536 97 9 5 141 232 502478508 502478603 1.550000e-14 91.6
13 TraesCS7D01G262100 chr7D 100.000 48 0 0 3950 3997 239765596 239765549 5.590000e-14 89.8
14 TraesCS7D01G262100 chr7D 100.000 48 0 0 3950 3997 549800044 549799997 5.590000e-14 89.8
15 TraesCS7D01G262100 chr7D 97.917 48 1 0 3950 3997 549829546 549829499 2.600000e-12 84.2
16 TraesCS7D01G262100 chr7B 93.480 2684 101 37 283 2910 216089111 216086446 0.000000e+00 3919.0
17 TraesCS7D01G262100 chr7B 93.342 766 16 10 2913 3651 216086416 216085659 0.000000e+00 1099.0
18 TraesCS7D01G262100 chr7B 89.011 182 19 1 3730 3911 551947404 551947584 1.470000e-54 224.0
19 TraesCS7D01G262100 chr7B 87.640 178 21 1 3734 3911 205769648 205769824 5.320000e-49 206.0
20 TraesCS7D01G262100 chr7B 88.298 94 11 0 2363 2456 450642308 450642215 3.320000e-21 113.0
21 TraesCS7D01G262100 chr7B 88.750 80 4 1 158 232 210873462 210873383 4.320000e-15 93.5
22 TraesCS7D01G262100 chr7A 93.380 2296 78 24 283 2546 258368770 258371023 0.000000e+00 3330.0
23 TraesCS7D01G262100 chr7A 96.358 604 17 3 2913 3512 258371365 258371967 0.000000e+00 989.0
24 TraesCS7D01G262100 chr7A 98.101 316 5 1 2596 2910 258371021 258371336 2.130000e-152 549.0
25 TraesCS7D01G262100 chr7A 85.106 141 11 4 3589 3725 258371959 258372093 7.080000e-28 135.0
26 TraesCS7D01G262100 chr7A 92.308 78 6 0 2379 2456 279180168 279180091 1.190000e-20 111.0
27 TraesCS7D01G262100 chr4D 91.304 184 14 2 1 182 116491888 116491705 2.420000e-62 250.0
28 TraesCS7D01G262100 chr4D 97.917 48 1 0 3950 3997 501451024 501450977 2.600000e-12 84.2
29 TraesCS7D01G262100 chr4D 100.000 36 0 0 4026 4061 215439919 215439954 2.620000e-07 67.6
30 TraesCS7D01G262100 chr2A 91.257 183 15 1 1 182 585651443 585651625 8.720000e-62 248.0
31 TraesCS7D01G262100 chr2A 88.398 181 18 3 3730 3909 58470251 58470073 8.840000e-52 215.0
32 TraesCS7D01G262100 chr2A 87.234 94 12 0 2363 2456 186443802 186443895 1.540000e-19 108.0
33 TraesCS7D01G262100 chr6A 84.524 252 32 6 287 535 409525303 409525550 4.060000e-60 243.0
34 TraesCS7D01G262100 chr6A 85.246 183 18 5 3730 3911 375974215 375974041 3.220000e-41 180.0
35 TraesCS7D01G262100 chr6A 89.610 77 8 0 2363 2439 172137283 172137207 9.290000e-17 99.0
36 TraesCS7D01G262100 chr3D 84.252 254 35 5 285 535 428967154 428967405 4.060000e-60 243.0
37 TraesCS7D01G262100 chr3D 82.639 288 34 9 306 588 431447906 431447630 1.460000e-59 241.0
38 TraesCS7D01G262100 chr3D 90.217 184 16 2 1 182 313206501 313206318 5.250000e-59 239.0
39 TraesCS7D01G262100 chr3D 85.263 95 14 0 2362 2456 575943024 575942930 9.290000e-17 99.0
40 TraesCS7D01G262100 chr3D 89.610 77 3 2 161 232 260942001 260941925 4.320000e-15 93.5
41 TraesCS7D01G262100 chr3D 97.917 48 1 0 3950 3997 567905635 567905682 2.600000e-12 84.2
42 TraesCS7D01G262100 chr3A 82.578 287 38 9 306 589 568971630 568971353 4.060000e-60 243.0
43 TraesCS7D01G262100 chr3A 90.110 182 18 0 3730 3911 7966892 7967073 1.890000e-58 237.0
44 TraesCS7D01G262100 chr3A 89.560 182 13 6 3730 3911 709167407 709167582 4.080000e-55 226.0
45 TraesCS7D01G262100 chr4B 91.011 178 14 2 7 182 633388611 633388434 5.250000e-59 239.0
46 TraesCS7D01G262100 chr4B 90.449 178 15 2 7 182 633456372 633456195 2.440000e-57 233.0
47 TraesCS7D01G262100 chr4B 89.130 92 8 2 3773 3864 73657140 73657051 3.320000e-21 113.0
48 TraesCS7D01G262100 chr2D 83.984 256 34 7 285 538 362281768 362282018 5.250000e-59 239.0
49 TraesCS7D01G262100 chr2D 89.157 83 9 0 2363 2445 164389783 164389701 2.000000e-18 104.0
50 TraesCS7D01G262100 chr2D 88.235 85 10 0 2359 2443 160215173 160215089 7.180000e-18 102.0
51 TraesCS7D01G262100 chr2D 88.462 78 4 2 158 230 481947493 481947570 5.590000e-14 89.8
52 TraesCS7D01G262100 chr2D 95.000 40 2 0 3730 3769 586799701 586799740 3.390000e-06 63.9
53 TraesCS7D01G262100 chr6D 90.110 182 18 0 3730 3911 5591921 5592102 1.890000e-58 237.0
54 TraesCS7D01G262100 chr6D 98.485 66 1 0 217 282 321923033 321922968 2.560000e-22 117.0
55 TraesCS7D01G262100 chr6D 94.030 67 4 0 2363 2429 133296631 133296565 7.180000e-18 102.0
56 TraesCS7D01G262100 chr1D 90.164 183 16 2 3730 3911 386895595 386895776 1.890000e-58 237.0
57 TraesCS7D01G262100 chr1A 90.110 182 18 0 3730 3911 481926154 481926335 1.890000e-58 237.0
58 TraesCS7D01G262100 chr5D 90.055 181 16 2 3 182 485636868 485636689 2.440000e-57 233.0
59 TraesCS7D01G262100 chr5D 89.560 182 9 5 3730 3911 286194426 286194255 5.280000e-54 222.0
60 TraesCS7D01G262100 chr5D 97.059 68 2 0 217 284 60730061 60730128 9.220000e-22 115.0
61 TraesCS7D01G262100 chr5D 88.750 80 9 0 2378 2457 61715075 61714996 9.290000e-17 99.0
62 TraesCS7D01G262100 chr5D 100.000 36 0 0 4026 4061 104580547 104580512 2.620000e-07 67.6
63 TraesCS7D01G262100 chr4A 89.503 181 17 2 4 182 237106922 237106742 1.140000e-55 228.0
64 TraesCS7D01G262100 chr4A 86.413 184 17 7 3730 3911 521867577 521867400 1.150000e-45 195.0
65 TraesCS7D01G262100 chr4A 84.211 133 16 2 158 285 8931789 8931921 1.530000e-24 124.0
66 TraesCS7D01G262100 chr4A 85.417 96 12 2 2363 2457 707399340 707399434 9.290000e-17 99.0
67 TraesCS7D01G262100 chr5B 86.413 184 18 7 3730 3911 665898820 665898642 1.150000e-45 195.0
68 TraesCS7D01G262100 chr2B 97.101 69 2 0 217 285 250954595 250954663 2.560000e-22 117.0
69 TraesCS7D01G262100 chr1B 98.485 66 1 0 217 282 284057394 284057459 2.560000e-22 117.0
70 TraesCS7D01G262100 chr3B 93.333 75 5 0 217 291 33269721 33269647 1.190000e-20 111.0
71 TraesCS7D01G262100 chr5A 87.000 100 10 3 2360 2457 51690151 51690053 4.290000e-20 110.0
72 TraesCS7D01G262100 chr5A 85.149 101 12 3 2360 2458 689619217 689619316 2.580000e-17 100.0
73 TraesCS7D01G262100 chr6B 89.333 75 3 2 158 227 14710228 14710302 5.590000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G262100 chr7D 239772767 239776827 4060 True 7500.00 7500 100.00000 1 4061 1 chr7D.!!$R7 4060
1 TraesCS7D01G262100 chr7B 216085659 216089111 3452 True 2509.00 3919 93.41100 283 3651 2 chr7B.!!$R3 3368
2 TraesCS7D01G262100 chr7A 258368770 258372093 3323 False 1250.75 3330 93.23625 283 3725 4 chr7A.!!$F1 3442

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
204 205 0.034574 TGGCTGACGGCAAATATGGT 60.035 50.0 8.86 0.0 43.40 3.55 F
235 236 0.034756 TTCTTTGCCGTCAGCTAGCA 59.965 50.0 18.83 0.0 44.23 3.49 F
264 265 0.106708 AAGCTGGCTGACGACAAAGA 59.893 50.0 0.00 0.0 0.00 2.52 F
265 266 0.322975 AGCTGGCTGACGACAAAGAT 59.677 50.0 0.00 0.0 0.00 2.40 F
1474 1517 0.543749 CCTAGAAGTGGAAGGCCCTG 59.456 60.0 0.00 0.0 35.38 4.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1871 1926 1.340405 ACTGCAAAGCATGGTCCTAGG 60.340 52.381 0.82 0.82 38.13 3.02 R
2236 2294 2.231478 AGAAGAAGTGCGCTAGCTACAA 59.769 45.455 13.93 0.00 45.42 2.41 R
2319 2377 7.878127 ACCACATAAGTATGAATATAGCACACC 59.122 37.037 5.33 0.00 37.15 4.16 R
2340 2398 8.967664 AGTATTTGTTACTCTAAACAACCACA 57.032 30.769 1.86 0.00 46.20 4.17 R
3074 3167 1.952296 ACAAGTTCTTTGCTGCCAGAG 59.048 47.619 0.00 0.00 40.59 3.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 3.217231 CGTAGCTAGTGGGGTGGG 58.783 66.667 0.00 0.00 0.00 4.61
20 21 2.432300 CGTAGCTAGTGGGGTGGGG 61.432 68.421 0.00 0.00 0.00 4.96
21 22 2.070650 GTAGCTAGTGGGGTGGGGG 61.071 68.421 0.00 0.00 0.00 5.40
39 40 4.391601 CGGGGGAAACGGCCGTTA 62.392 66.667 41.25 0.00 37.35 3.18
40 41 2.437180 GGGGGAAACGGCCGTTAG 60.437 66.667 41.25 9.18 37.35 2.34
41 42 2.437180 GGGGAAACGGCCGTTAGG 60.437 66.667 41.25 8.73 37.35 2.69
42 43 2.348620 GGGAAACGGCCGTTAGGT 59.651 61.111 41.25 27.73 40.50 3.08
43 44 1.302752 GGGAAACGGCCGTTAGGTT 60.303 57.895 41.25 27.34 40.50 3.50
44 45 1.579964 GGGAAACGGCCGTTAGGTTG 61.580 60.000 41.25 6.16 40.50 3.77
45 46 1.579964 GGAAACGGCCGTTAGGTTGG 61.580 60.000 41.25 5.32 40.50 3.77
54 55 3.821421 CCGTTAGGTTGGCTATTCTCT 57.179 47.619 0.00 0.00 0.00 3.10
55 56 4.138487 CCGTTAGGTTGGCTATTCTCTT 57.862 45.455 0.00 0.00 0.00 2.85
56 57 4.514401 CCGTTAGGTTGGCTATTCTCTTT 58.486 43.478 0.00 0.00 0.00 2.52
57 58 4.332819 CCGTTAGGTTGGCTATTCTCTTTG 59.667 45.833 0.00 0.00 0.00 2.77
58 59 4.935808 CGTTAGGTTGGCTATTCTCTTTGT 59.064 41.667 0.00 0.00 0.00 2.83
59 60 5.063564 CGTTAGGTTGGCTATTCTCTTTGTC 59.936 44.000 0.00 0.00 0.00 3.18
60 61 3.600388 AGGTTGGCTATTCTCTTTGTCG 58.400 45.455 0.00 0.00 0.00 4.35
61 62 3.008049 AGGTTGGCTATTCTCTTTGTCGT 59.992 43.478 0.00 0.00 0.00 4.34
62 63 3.371285 GGTTGGCTATTCTCTTTGTCGTC 59.629 47.826 0.00 0.00 0.00 4.20
63 64 4.246458 GTTGGCTATTCTCTTTGTCGTCT 58.754 43.478 0.00 0.00 0.00 4.18
64 65 3.849911 TGGCTATTCTCTTTGTCGTCTG 58.150 45.455 0.00 0.00 0.00 3.51
65 66 2.605366 GGCTATTCTCTTTGTCGTCTGC 59.395 50.000 0.00 0.00 0.00 4.26
66 67 3.516615 GCTATTCTCTTTGTCGTCTGCT 58.483 45.455 0.00 0.00 0.00 4.24
67 68 3.549873 GCTATTCTCTTTGTCGTCTGCTC 59.450 47.826 0.00 0.00 0.00 4.26
68 69 2.051879 TTCTCTTTGTCGTCTGCTCG 57.948 50.000 0.00 0.00 0.00 5.03
69 70 0.387367 TCTCTTTGTCGTCTGCTCGC 60.387 55.000 0.00 0.00 0.00 5.03
70 71 1.669158 CTCTTTGTCGTCTGCTCGCG 61.669 60.000 0.00 0.00 0.00 5.87
71 72 2.720758 CTTTGTCGTCTGCTCGCGG 61.721 63.158 6.13 0.00 0.00 6.46
72 73 3.202216 TTTGTCGTCTGCTCGCGGA 62.202 57.895 6.13 0.00 0.00 5.54
73 74 3.891586 TTGTCGTCTGCTCGCGGAC 62.892 63.158 18.49 18.49 45.97 4.79
86 87 2.358737 CGGACGGCAGGAAGCTTT 60.359 61.111 0.00 0.00 44.79 3.51
87 88 2.680913 CGGACGGCAGGAAGCTTTG 61.681 63.158 0.00 0.00 44.79 2.77
88 89 2.563427 GACGGCAGGAAGCTTTGC 59.437 61.111 13.65 13.65 44.79 3.68
92 93 2.563427 GCAGGAAGCTTTGCCGTC 59.437 61.111 11.37 0.00 41.15 4.79
93 94 1.968540 GCAGGAAGCTTTGCCGTCT 60.969 57.895 11.37 0.00 41.15 4.18
94 95 1.871772 CAGGAAGCTTTGCCGTCTG 59.128 57.895 0.00 0.00 0.00 3.51
95 96 1.968540 AGGAAGCTTTGCCGTCTGC 60.969 57.895 0.00 0.00 41.77 4.26
96 97 1.968540 GGAAGCTTTGCCGTCTGCT 60.969 57.895 0.00 0.00 42.00 4.24
97 98 0.673644 GGAAGCTTTGCCGTCTGCTA 60.674 55.000 0.00 0.00 42.00 3.49
98 99 0.723981 GAAGCTTTGCCGTCTGCTAG 59.276 55.000 0.00 0.00 42.00 3.42
99 100 1.301677 AAGCTTTGCCGTCTGCTAGC 61.302 55.000 8.10 8.10 43.91 3.42
100 101 2.034879 GCTTTGCCGTCTGCTAGCA 61.035 57.895 18.22 18.22 43.41 3.49
101 102 1.975363 GCTTTGCCGTCTGCTAGCAG 61.975 60.000 34.48 34.48 43.41 4.24
108 109 3.376546 TCTGCTAGCAGACGGCAA 58.623 55.556 37.64 19.05 46.80 4.52
109 110 1.671166 TCTGCTAGCAGACGGCAAA 59.329 52.632 37.64 18.34 46.80 3.68
110 111 0.390340 TCTGCTAGCAGACGGCAAAG 60.390 55.000 37.64 15.06 46.80 2.77
111 112 2.769270 TCTGCTAGCAGACGGCAAAGA 61.769 52.381 37.64 17.11 46.80 2.52
112 113 4.241416 TCTGCTAGCAGACGGCAAAGAA 62.241 50.000 37.64 16.20 46.80 2.52
113 114 5.673210 TCTGCTAGCAGACGGCAAAGAAA 62.673 47.826 37.64 15.69 46.80 2.52
116 117 3.461843 GCAGACGGCAAAGAAAGTG 57.538 52.632 0.00 0.00 43.97 3.16
117 118 0.040067 GCAGACGGCAAAGAAAGTGG 60.040 55.000 0.00 0.00 43.97 4.00
118 119 0.040067 CAGACGGCAAAGAAAGTGGC 60.040 55.000 0.00 0.00 38.15 5.01
119 120 0.179018 AGACGGCAAAGAAAGTGGCT 60.179 50.000 0.00 0.00 39.31 4.75
120 121 0.040067 GACGGCAAAGAAAGTGGCTG 60.040 55.000 0.00 0.00 39.31 4.85
121 122 0.751643 ACGGCAAAGAAAGTGGCTGT 60.752 50.000 0.00 0.00 40.81 4.40
122 123 0.385390 CGGCAAAGAAAGTGGCTGTT 59.615 50.000 0.00 0.00 39.31 3.16
123 124 1.606668 CGGCAAAGAAAGTGGCTGTTA 59.393 47.619 0.00 0.00 39.31 2.41
124 125 2.350772 CGGCAAAGAAAGTGGCTGTTAG 60.351 50.000 0.00 0.00 39.31 2.34
125 126 2.029918 GGCAAAGAAAGTGGCTGTTAGG 60.030 50.000 0.00 0.00 38.46 2.69
126 127 2.623416 GCAAAGAAAGTGGCTGTTAGGT 59.377 45.455 0.00 0.00 0.00 3.08
127 128 3.818773 GCAAAGAAAGTGGCTGTTAGGTA 59.181 43.478 0.00 0.00 0.00 3.08
128 129 4.083271 GCAAAGAAAGTGGCTGTTAGGTAG 60.083 45.833 0.00 0.00 0.00 3.18
129 130 4.976540 AAGAAAGTGGCTGTTAGGTAGT 57.023 40.909 0.00 0.00 0.00 2.73
130 131 4.976540 AGAAAGTGGCTGTTAGGTAGTT 57.023 40.909 0.00 0.00 0.00 2.24
131 132 4.895961 AGAAAGTGGCTGTTAGGTAGTTC 58.104 43.478 0.00 0.00 0.00 3.01
132 133 4.593634 AGAAAGTGGCTGTTAGGTAGTTCT 59.406 41.667 0.00 0.00 0.00 3.01
133 134 4.538746 AAGTGGCTGTTAGGTAGTTCTC 57.461 45.455 0.00 0.00 0.00 2.87
134 135 2.492484 AGTGGCTGTTAGGTAGTTCTCG 59.508 50.000 0.00 0.00 0.00 4.04
135 136 2.230750 GTGGCTGTTAGGTAGTTCTCGT 59.769 50.000 0.00 0.00 0.00 4.18
136 137 2.895404 TGGCTGTTAGGTAGTTCTCGTT 59.105 45.455 0.00 0.00 0.00 3.85
137 138 4.081406 TGGCTGTTAGGTAGTTCTCGTTA 58.919 43.478 0.00 0.00 0.00 3.18
138 139 4.157289 TGGCTGTTAGGTAGTTCTCGTTAG 59.843 45.833 0.00 0.00 0.00 2.34
139 140 4.157472 GGCTGTTAGGTAGTTCTCGTTAGT 59.843 45.833 0.00 0.00 0.00 2.24
140 141 5.094134 GCTGTTAGGTAGTTCTCGTTAGTG 58.906 45.833 0.00 0.00 0.00 2.74
141 142 5.633830 TGTTAGGTAGTTCTCGTTAGTGG 57.366 43.478 0.00 0.00 0.00 4.00
142 143 4.460382 TGTTAGGTAGTTCTCGTTAGTGGG 59.540 45.833 0.00 0.00 0.00 4.61
143 144 1.823610 AGGTAGTTCTCGTTAGTGGGC 59.176 52.381 0.00 0.00 0.00 5.36
144 145 1.134877 GGTAGTTCTCGTTAGTGGGCC 60.135 57.143 0.00 0.00 0.00 5.80
145 146 1.547372 GTAGTTCTCGTTAGTGGGCCA 59.453 52.381 0.00 0.00 0.00 5.36
146 147 0.320697 AGTTCTCGTTAGTGGGCCAC 59.679 55.000 29.32 29.32 34.10 5.01
147 148 0.672711 GTTCTCGTTAGTGGGCCACC 60.673 60.000 32.30 16.68 34.49 4.61
148 149 1.833787 TTCTCGTTAGTGGGCCACCC 61.834 60.000 32.30 19.21 45.71 4.61
149 150 2.203877 TCGTTAGTGGGCCACCCT 60.204 61.111 32.30 18.08 45.70 4.34
150 151 2.240162 CTCGTTAGTGGGCCACCCTC 62.240 65.000 32.30 20.27 45.70 4.30
151 152 2.675371 GTTAGTGGGCCACCCTCC 59.325 66.667 32.30 14.59 45.70 4.30
152 153 2.612746 TTAGTGGGCCACCCTCCC 60.613 66.667 32.30 7.31 45.70 4.30
153 154 3.202591 TTAGTGGGCCACCCTCCCT 62.203 63.158 32.30 15.77 45.70 4.20
154 155 2.723334 TTAGTGGGCCACCCTCCCTT 62.723 60.000 32.30 15.01 45.70 3.95
155 156 2.723334 TAGTGGGCCACCCTCCCTTT 62.723 60.000 32.30 14.25 45.70 3.11
156 157 2.785389 TGGGCCACCCTCCCTTTT 60.785 61.111 0.00 0.00 45.70 2.27
157 158 2.408203 TGGGCCACCCTCCCTTTTT 61.408 57.895 0.00 0.00 45.70 1.94
158 159 1.913262 GGGCCACCCTCCCTTTTTG 60.913 63.158 4.39 0.00 41.34 2.44
159 160 1.152333 GGCCACCCTCCCTTTTTGT 60.152 57.895 0.00 0.00 0.00 2.83
160 161 1.185618 GGCCACCCTCCCTTTTTGTC 61.186 60.000 0.00 0.00 0.00 3.18
161 162 1.524008 GCCACCCTCCCTTTTTGTCG 61.524 60.000 0.00 0.00 0.00 4.35
162 163 0.179001 CCACCCTCCCTTTTTGTCGT 60.179 55.000 0.00 0.00 0.00 4.34
163 164 1.235724 CACCCTCCCTTTTTGTCGTC 58.764 55.000 0.00 0.00 0.00 4.20
164 165 1.137697 ACCCTCCCTTTTTGTCGTCT 58.862 50.000 0.00 0.00 0.00 4.18
165 166 1.202770 ACCCTCCCTTTTTGTCGTCTG 60.203 52.381 0.00 0.00 0.00 3.51
166 167 0.875059 CCTCCCTTTTTGTCGTCTGC 59.125 55.000 0.00 0.00 0.00 4.26
167 168 1.543429 CCTCCCTTTTTGTCGTCTGCT 60.543 52.381 0.00 0.00 0.00 4.24
168 169 2.289444 CCTCCCTTTTTGTCGTCTGCTA 60.289 50.000 0.00 0.00 0.00 3.49
169 170 2.996621 CTCCCTTTTTGTCGTCTGCTAG 59.003 50.000 0.00 0.00 0.00 3.42
170 171 1.464997 CCCTTTTTGTCGTCTGCTAGC 59.535 52.381 8.10 8.10 0.00 3.42
171 172 2.143122 CCTTTTTGTCGTCTGCTAGCA 58.857 47.619 18.22 18.22 0.00 3.49
172 173 2.158449 CCTTTTTGTCGTCTGCTAGCAG 59.842 50.000 34.48 34.48 44.86 4.24
179 180 3.376546 TCTGCTAGCAGACGGCAA 58.623 55.556 37.64 19.05 46.80 4.52
180 181 1.671166 TCTGCTAGCAGACGGCAAA 59.329 52.632 37.64 18.34 46.80 3.68
181 182 0.390340 TCTGCTAGCAGACGGCAAAG 60.390 55.000 37.64 15.06 46.80 2.77
182 183 2.769270 TCTGCTAGCAGACGGCAAAGA 61.769 52.381 37.64 17.11 46.80 2.52
183 184 4.604913 TCTGCTAGCAGACGGCAAAGAG 62.605 54.545 37.64 13.84 46.80 2.85
191 192 2.359107 CGGCAAAGAGCTGGCTGA 60.359 61.111 0.00 0.00 46.20 4.26
192 193 2.684843 CGGCAAAGAGCTGGCTGAC 61.685 63.158 0.00 0.00 46.20 3.51
193 194 2.684843 GGCAAAGAGCTGGCTGACG 61.685 63.158 0.00 0.00 44.79 4.35
194 195 2.684843 GCAAAGAGCTGGCTGACGG 61.685 63.158 0.00 0.00 41.15 4.79
203 204 0.664761 CTGGCTGACGGCAAATATGG 59.335 55.000 8.86 0.00 45.84 2.74
204 205 0.034574 TGGCTGACGGCAAATATGGT 60.035 50.000 8.86 0.00 43.40 3.55
205 206 0.663153 GGCTGACGGCAAATATGGTC 59.337 55.000 8.86 0.00 44.01 4.02
206 207 1.668419 GCTGACGGCAAATATGGTCT 58.332 50.000 0.00 0.00 41.35 3.85
207 208 2.017049 GCTGACGGCAAATATGGTCTT 58.983 47.619 0.00 0.00 41.35 3.01
208 209 2.423538 GCTGACGGCAAATATGGTCTTT 59.576 45.455 0.00 0.00 41.35 2.52
209 210 3.731867 GCTGACGGCAAATATGGTCTTTG 60.732 47.826 0.00 0.00 41.35 2.77
210 211 3.417101 TGACGGCAAATATGGTCTTTGT 58.583 40.909 0.00 0.00 36.26 2.83
211 212 3.190327 TGACGGCAAATATGGTCTTTGTG 59.810 43.478 0.00 0.00 36.26 3.33
212 213 2.094752 ACGGCAAATATGGTCTTTGTGC 60.095 45.455 0.00 0.00 36.26 4.57
213 214 2.164219 CGGCAAATATGGTCTTTGTGCT 59.836 45.455 0.00 0.00 36.26 4.40
214 215 3.731867 CGGCAAATATGGTCTTTGTGCTC 60.732 47.826 0.00 0.00 36.26 4.26
215 216 3.445096 GGCAAATATGGTCTTTGTGCTCT 59.555 43.478 0.00 0.00 36.26 4.09
216 217 4.082026 GGCAAATATGGTCTTTGTGCTCTT 60.082 41.667 0.00 0.00 36.26 2.85
217 218 5.473039 GCAAATATGGTCTTTGTGCTCTTT 58.527 37.500 0.00 0.00 36.26 2.52
218 219 5.574443 GCAAATATGGTCTTTGTGCTCTTTC 59.426 40.000 0.00 0.00 36.26 2.62
219 220 6.571150 GCAAATATGGTCTTTGTGCTCTTTCT 60.571 38.462 0.00 0.00 36.26 2.52
220 221 7.373493 CAAATATGGTCTTTGTGCTCTTTCTT 58.627 34.615 0.00 0.00 0.00 2.52
221 222 7.530426 AATATGGTCTTTGTGCTCTTTCTTT 57.470 32.000 0.00 0.00 0.00 2.52
222 223 4.637483 TGGTCTTTGTGCTCTTTCTTTG 57.363 40.909 0.00 0.00 0.00 2.77
223 224 3.181487 TGGTCTTTGTGCTCTTTCTTTGC 60.181 43.478 0.00 0.00 0.00 3.68
224 225 3.375642 GTCTTTGTGCTCTTTCTTTGCC 58.624 45.455 0.00 0.00 0.00 4.52
225 226 2.033299 TCTTTGTGCTCTTTCTTTGCCG 59.967 45.455 0.00 0.00 0.00 5.69
226 227 1.388547 TTGTGCTCTTTCTTTGCCGT 58.611 45.000 0.00 0.00 0.00 5.68
227 228 0.944386 TGTGCTCTTTCTTTGCCGTC 59.056 50.000 0.00 0.00 0.00 4.79
228 229 0.944386 GTGCTCTTTCTTTGCCGTCA 59.056 50.000 0.00 0.00 0.00 4.35
229 230 1.069636 GTGCTCTTTCTTTGCCGTCAG 60.070 52.381 0.00 0.00 0.00 3.51
230 231 0.110010 GCTCTTTCTTTGCCGTCAGC 60.110 55.000 0.00 0.00 44.14 4.26
231 232 1.517242 CTCTTTCTTTGCCGTCAGCT 58.483 50.000 0.00 0.00 44.23 4.24
232 233 2.688507 CTCTTTCTTTGCCGTCAGCTA 58.311 47.619 0.00 0.00 44.23 3.32
233 234 2.670414 CTCTTTCTTTGCCGTCAGCTAG 59.330 50.000 0.00 0.00 44.23 3.42
234 235 1.129437 CTTTCTTTGCCGTCAGCTAGC 59.871 52.381 6.62 6.62 44.23 3.42
235 236 0.034756 TTCTTTGCCGTCAGCTAGCA 59.965 50.000 18.83 0.00 44.23 3.49
236 237 0.390340 TCTTTGCCGTCAGCTAGCAG 60.390 55.000 18.83 9.54 44.23 4.24
237 238 0.390340 CTTTGCCGTCAGCTAGCAGA 60.390 55.000 18.83 12.26 44.23 4.26
238 239 0.670546 TTTGCCGTCAGCTAGCAGAC 60.671 55.000 25.73 25.73 44.23 3.51
241 242 2.580867 CGTCAGCTAGCAGACGGC 60.581 66.667 39.52 18.28 46.97 5.68
242 243 3.342370 CGTCAGCTAGCAGACGGCA 62.342 63.158 39.52 7.94 46.97 5.69
243 244 2.819117 CGTCAGCTAGCAGACGGCAA 62.819 60.000 39.52 7.24 46.97 4.52
255 256 3.041701 CGGCAAAAAGCTGGCTGA 58.958 55.556 0.00 0.00 46.20 4.26
256 257 1.372128 CGGCAAAAAGCTGGCTGAC 60.372 57.895 0.00 0.00 46.20 3.51
257 258 1.372128 GGCAAAAAGCTGGCTGACG 60.372 57.895 0.00 0.00 44.79 4.35
258 259 1.654220 GCAAAAAGCTGGCTGACGA 59.346 52.632 0.00 0.00 41.15 4.20
259 260 0.661483 GCAAAAAGCTGGCTGACGAC 60.661 55.000 0.00 0.00 41.15 4.34
260 261 0.662619 CAAAAAGCTGGCTGACGACA 59.337 50.000 0.00 0.00 0.00 4.35
261 262 1.065401 CAAAAAGCTGGCTGACGACAA 59.935 47.619 0.00 0.00 0.00 3.18
262 263 1.388547 AAAAGCTGGCTGACGACAAA 58.611 45.000 0.00 0.00 0.00 2.83
263 264 0.947244 AAAGCTGGCTGACGACAAAG 59.053 50.000 0.00 0.00 0.00 2.77
264 265 0.106708 AAGCTGGCTGACGACAAAGA 59.893 50.000 0.00 0.00 0.00 2.52
265 266 0.322975 AGCTGGCTGACGACAAAGAT 59.677 50.000 0.00 0.00 0.00 2.40
266 267 0.723981 GCTGGCTGACGACAAAGATC 59.276 55.000 0.00 0.00 0.00 2.75
267 268 1.363744 CTGGCTGACGACAAAGATCC 58.636 55.000 0.00 0.00 0.00 3.36
268 269 0.976641 TGGCTGACGACAAAGATCCT 59.023 50.000 0.00 0.00 0.00 3.24
269 270 1.338105 TGGCTGACGACAAAGATCCTG 60.338 52.381 0.00 0.00 0.00 3.86
270 271 1.066858 GGCTGACGACAAAGATCCTGA 60.067 52.381 0.00 0.00 0.00 3.86
271 272 2.419297 GGCTGACGACAAAGATCCTGAT 60.419 50.000 0.00 0.00 0.00 2.90
272 273 3.265791 GCTGACGACAAAGATCCTGATT 58.734 45.455 0.00 0.00 0.00 2.57
273 274 3.308323 GCTGACGACAAAGATCCTGATTC 59.692 47.826 0.00 0.00 0.00 2.52
274 275 3.861840 TGACGACAAAGATCCTGATTCC 58.138 45.455 0.00 0.00 0.00 3.01
275 276 3.260632 TGACGACAAAGATCCTGATTCCA 59.739 43.478 0.00 0.00 0.00 3.53
276 277 3.866651 ACGACAAAGATCCTGATTCCAG 58.133 45.455 0.00 0.00 40.09 3.86
277 278 3.261897 ACGACAAAGATCCTGATTCCAGT 59.738 43.478 0.00 0.00 38.74 4.00
278 279 4.466370 ACGACAAAGATCCTGATTCCAGTA 59.534 41.667 0.00 0.00 38.74 2.74
279 280 5.046529 CGACAAAGATCCTGATTCCAGTAG 58.953 45.833 0.00 0.00 38.74 2.57
280 281 5.394663 CGACAAAGATCCTGATTCCAGTAGT 60.395 44.000 0.00 0.00 38.74 2.73
281 282 5.738909 ACAAAGATCCTGATTCCAGTAGTG 58.261 41.667 0.00 0.00 38.74 2.74
303 304 4.150980 TGATACGTTCAACATTGTCCGAAC 59.849 41.667 16.47 16.47 35.50 3.95
644 659 1.392589 ACAGAAAACAGGCTGGTGTG 58.607 50.000 20.34 13.32 36.47 3.82
645 660 1.340991 ACAGAAAACAGGCTGGTGTGT 60.341 47.619 20.34 13.98 36.47 3.72
760 776 0.965363 ACGCCGCATCTCCCAAAAAT 60.965 50.000 0.00 0.00 0.00 1.82
775 793 4.202409 CCCAAAAATGGAAAACTAGCCCAA 60.202 41.667 0.00 0.00 33.15 4.12
940 968 2.917227 CCCAACGCCCAAAGCCTT 60.917 61.111 0.00 0.00 38.78 4.35
1346 1389 3.787001 GCCCTTCCCCTCGTCCAG 61.787 72.222 0.00 0.00 0.00 3.86
1354 1397 2.829023 TCCCCTCGTCCAGTATTTCTT 58.171 47.619 0.00 0.00 0.00 2.52
1450 1493 6.096282 CCAAATTCCCAAATCATACGGTACTT 59.904 38.462 0.00 0.00 0.00 2.24
1474 1517 0.543749 CCTAGAAGTGGAAGGCCCTG 59.456 60.000 0.00 0.00 35.38 4.45
1612 1667 1.127567 TGGACCTGGAGACAAGTGGG 61.128 60.000 0.00 0.00 42.06 4.61
1681 1736 2.027192 CGTCCTTGGGATCTCCTTTTGA 60.027 50.000 0.00 0.00 32.73 2.69
1768 1823 7.381408 CGTGTAGTTCTTTACAAGATCTGTTGA 59.619 37.037 0.00 0.00 37.91 3.18
1830 1885 1.228429 TGGCCTGTAGTTTGGTGCC 60.228 57.895 3.32 0.00 39.33 5.01
2106 2163 4.981806 TTTGCTGTAGTGTTGCTCTTTT 57.018 36.364 0.00 0.00 0.00 2.27
2107 2164 4.981806 TTGCTGTAGTGTTGCTCTTTTT 57.018 36.364 0.00 0.00 0.00 1.94
2236 2294 5.698741 TCCAGAGTCATATGTTGGATTGT 57.301 39.130 13.27 0.00 33.21 2.71
2319 2377 4.336932 CATGCACTGTTTATGTGACGATG 58.663 43.478 0.00 0.00 37.60 3.84
2336 2394 6.089551 GTGACGATGGTGTGCTATATTCATAC 59.910 42.308 0.00 0.00 0.00 2.39
2340 2398 8.531982 ACGATGGTGTGCTATATTCATACTTAT 58.468 33.333 0.00 2.11 0.00 1.73
2346 2404 9.273016 GTGTGCTATATTCATACTTATGTGGTT 57.727 33.333 0.00 0.00 35.26 3.67
2376 2434 5.342866 AGTAACAAATACTCCCTCTGTCCT 58.657 41.667 0.00 0.00 41.04 3.85
2538 2598 5.728637 ATAGGTCGCTGATGATGATACAA 57.271 39.130 0.00 0.00 0.00 2.41
2540 2600 3.638627 AGGTCGCTGATGATGATACAAGA 59.361 43.478 0.00 0.00 0.00 3.02
2541 2601 4.282957 AGGTCGCTGATGATGATACAAGAT 59.717 41.667 0.00 0.00 0.00 2.40
2542 2602 5.478332 AGGTCGCTGATGATGATACAAGATA 59.522 40.000 0.00 0.00 0.00 1.98
2565 2625 0.170339 CATGTGTGTGCCATCTGCTG 59.830 55.000 0.00 0.00 42.00 4.41
2594 2655 8.818622 AACCCTATTTGTAGGAAATTACCTTC 57.181 34.615 3.10 0.00 41.00 3.46
2608 2669 6.436843 AATTACCTTCTAATTGCAAGTCCG 57.563 37.500 1.02 0.00 0.00 4.79
2777 2838 4.813697 GCTCTTAGATGGTCCTTGATCAAC 59.186 45.833 3.38 0.00 0.00 3.18
2910 2972 2.887152 GTTGAGAGGTTGCATGGAAGTT 59.113 45.455 0.00 0.00 0.00 2.66
2911 2973 4.072131 GTTGAGAGGTTGCATGGAAGTTA 58.928 43.478 0.00 0.00 0.00 2.24
3033 3123 1.134670 GGGAGCTTCTACGTGCAGAAT 60.135 52.381 0.00 0.00 34.14 2.40
3072 3165 6.443251 AACTATGGTTAAGGAAGGGCGACC 62.443 50.000 0.00 0.00 42.15 4.79
3392 3485 7.554118 TCTTCCCTTGCTCAGTTAATATTCTTG 59.446 37.037 0.00 0.00 0.00 3.02
3460 3556 7.225341 GCAATTTTGGATTGTTTTCAGAACTCT 59.775 33.333 1.30 0.00 0.00 3.24
3507 3623 0.726827 ATATGGCTGTTCGTTGTGCG 59.273 50.000 0.00 0.00 43.01 5.34
3535 3651 1.807742 TGTTCTGCGGTTTTAATCGGG 59.192 47.619 0.00 0.00 32.01 5.14
3540 3656 1.065345 TGCGGTTTTAATCGGGGATGA 60.065 47.619 0.00 0.00 32.01 2.92
3571 3687 1.648720 CCGCCCTATTTGTGCATCG 59.351 57.895 0.00 0.00 0.00 3.84
3588 3704 0.165727 TCGCTGTTGCTTGCATAACG 59.834 50.000 0.00 0.00 36.97 3.18
3589 3705 0.110238 CGCTGTTGCTTGCATAACGT 60.110 50.000 0.00 0.00 36.97 3.99
3643 3764 3.317993 CCAGTTTCCCAGAAACGTGAAAT 59.682 43.478 13.02 0.00 35.42 2.17
3652 3773 3.074412 AGAAACGTGAAATTGGCTCGAT 58.926 40.909 9.19 0.00 0.00 3.59
3687 3808 3.120649 GCAGCTAGTAAACGTGAAAGTGG 60.121 47.826 0.00 0.00 0.00 4.00
3725 3850 3.375299 GGTGTGACTTCATAACTGCCATC 59.625 47.826 0.00 0.00 0.00 3.51
3726 3851 4.002982 GTGTGACTTCATAACTGCCATCA 58.997 43.478 0.00 0.00 0.00 3.07
3727 3852 4.002982 TGTGACTTCATAACTGCCATCAC 58.997 43.478 0.00 0.00 36.58 3.06
3728 3853 3.375299 GTGACTTCATAACTGCCATCACC 59.625 47.826 0.00 0.00 31.17 4.02
3729 3854 2.945668 GACTTCATAACTGCCATCACCC 59.054 50.000 0.00 0.00 0.00 4.61
3730 3855 1.942657 CTTCATAACTGCCATCACCCG 59.057 52.381 0.00 0.00 0.00 5.28
3731 3856 0.180171 TCATAACTGCCATCACCCGG 59.820 55.000 0.00 0.00 0.00 5.73
3732 3857 0.819259 CATAACTGCCATCACCCGGG 60.819 60.000 22.25 22.25 0.00 5.73
3733 3858 0.986019 ATAACTGCCATCACCCGGGA 60.986 55.000 32.02 5.69 0.00 5.14
3734 3859 1.202099 TAACTGCCATCACCCGGGAA 61.202 55.000 32.02 15.97 0.00 3.97
3735 3860 2.438434 CTGCCATCACCCGGGAAC 60.438 66.667 32.02 9.85 0.00 3.62
3736 3861 2.933287 TGCCATCACCCGGGAACT 60.933 61.111 32.02 7.68 0.00 3.01
3737 3862 2.355115 GCCATCACCCGGGAACTT 59.645 61.111 32.02 0.00 0.00 2.66
3738 3863 2.046285 GCCATCACCCGGGAACTTG 61.046 63.158 32.02 15.97 0.00 3.16
3739 3864 1.378514 CCATCACCCGGGAACTTGG 60.379 63.158 32.02 22.98 0.00 3.61
3740 3865 1.378762 CATCACCCGGGAACTTGGT 59.621 57.895 32.02 8.48 33.87 3.67
3741 3866 0.960364 CATCACCCGGGAACTTGGTG 60.960 60.000 32.02 18.27 46.50 4.17
3742 3867 2.764637 ATCACCCGGGAACTTGGTGC 62.765 60.000 32.02 0.00 45.43 5.01
3743 3868 3.175710 ACCCGGGAACTTGGTGCT 61.176 61.111 32.02 0.00 32.55 4.40
3744 3869 2.359975 CCCGGGAACTTGGTGCTC 60.360 66.667 18.48 0.00 0.00 4.26
3745 3870 2.750350 CCGGGAACTTGGTGCTCT 59.250 61.111 0.00 0.00 0.00 4.09
3746 3871 1.376037 CCGGGAACTTGGTGCTCTC 60.376 63.158 0.00 0.00 0.00 3.20
3747 3872 1.738099 CGGGAACTTGGTGCTCTCG 60.738 63.158 0.00 0.00 0.00 4.04
3748 3873 1.376037 GGGAACTTGGTGCTCTCGG 60.376 63.158 0.00 0.00 0.00 4.63
3749 3874 1.376037 GGAACTTGGTGCTCTCGGG 60.376 63.158 0.00 0.00 0.00 5.14
3750 3875 1.371558 GAACTTGGTGCTCTCGGGT 59.628 57.895 0.00 0.00 0.00 5.28
3751 3876 0.606604 GAACTTGGTGCTCTCGGGTA 59.393 55.000 0.00 0.00 0.00 3.69
3752 3877 0.320697 AACTTGGTGCTCTCGGGTAC 59.679 55.000 0.00 0.00 0.00 3.34
3768 3893 3.299340 GGTACCCGCACACTCTATATG 57.701 52.381 0.00 0.00 0.00 1.78
3769 3894 2.609737 GGTACCCGCACACTCTATATGC 60.610 54.545 0.00 0.00 35.96 3.14
3775 3900 3.673746 GCACACTCTATATGCGCAAAA 57.326 42.857 17.11 6.15 0.00 2.44
3776 3901 3.611517 GCACACTCTATATGCGCAAAAG 58.388 45.455 17.11 12.59 0.00 2.27
3777 3902 3.309682 GCACACTCTATATGCGCAAAAGA 59.690 43.478 17.11 16.38 0.00 2.52
3778 3903 4.201812 GCACACTCTATATGCGCAAAAGAA 60.202 41.667 17.11 0.00 0.00 2.52
3779 3904 5.673568 GCACACTCTATATGCGCAAAAGAAA 60.674 40.000 17.11 0.00 0.00 2.52
3780 3905 6.489675 CACACTCTATATGCGCAAAAGAAAT 58.510 36.000 17.11 5.95 0.00 2.17
3781 3906 6.968904 CACACTCTATATGCGCAAAAGAAATT 59.031 34.615 17.11 0.00 0.00 1.82
3782 3907 8.122330 CACACTCTATATGCGCAAAAGAAATTA 58.878 33.333 17.11 0.00 0.00 1.40
3783 3908 8.338259 ACACTCTATATGCGCAAAAGAAATTAG 58.662 33.333 17.11 7.78 0.00 1.73
3784 3909 8.338259 CACTCTATATGCGCAAAAGAAATTAGT 58.662 33.333 17.11 8.40 0.00 2.24
3785 3910 9.542462 ACTCTATATGCGCAAAAGAAATTAGTA 57.458 29.630 17.11 0.00 0.00 1.82
3791 3916 7.795431 TGCGCAAAAGAAATTAGTAATTCAG 57.205 32.000 8.16 0.00 0.00 3.02
3792 3917 7.589395 TGCGCAAAAGAAATTAGTAATTCAGA 58.411 30.769 8.16 0.00 0.00 3.27
3793 3918 8.079203 TGCGCAAAAGAAATTAGTAATTCAGAA 58.921 29.630 8.16 0.00 0.00 3.02
3794 3919 8.911662 GCGCAAAAGAAATTAGTAATTCAGAAA 58.088 29.630 8.56 0.00 0.00 2.52
3813 3938 9.956720 TTCAGAAAAAGTTGCAAAAATTTCAAA 57.043 22.222 23.13 17.07 30.75 2.69
3846 3971 9.685276 TTAGAATCAAACATGATCAGGTATTGT 57.315 29.630 14.25 10.77 0.00 2.71
3848 3973 9.685276 AGAATCAAACATGATCAGGTATTGTAA 57.315 29.630 14.25 6.41 0.00 2.41
3851 3976 8.141835 TCAAACATGATCAGGTATTGTAATCG 57.858 34.615 14.25 0.00 0.00 3.34
3852 3977 7.768582 TCAAACATGATCAGGTATTGTAATCGT 59.231 33.333 14.25 0.00 0.00 3.73
3853 3978 9.040939 CAAACATGATCAGGTATTGTAATCGTA 57.959 33.333 14.25 0.00 0.00 3.43
3854 3979 9.778741 AAACATGATCAGGTATTGTAATCGTAT 57.221 29.630 14.25 0.00 0.00 3.06
3881 4006 9.685276 AAAAAGTTTGGAAAAGAAATGATTCCT 57.315 25.926 5.48 0.00 42.50 3.36
3885 4010 9.933723 AGTTTGGAAAAGAAATGATTCCTATTG 57.066 29.630 5.48 0.00 42.50 1.90
3886 4011 9.927668 GTTTGGAAAAGAAATGATTCCTATTGA 57.072 29.630 5.48 0.00 42.50 2.57
3887 4012 9.927668 TTTGGAAAAGAAATGATTCCTATTGAC 57.072 29.630 5.48 0.00 42.50 3.18
3888 4013 8.884124 TGGAAAAGAAATGATTCCTATTGACT 57.116 30.769 5.48 0.00 42.50 3.41
3889 4014 9.312904 TGGAAAAGAAATGATTCCTATTGACTT 57.687 29.630 5.48 0.00 42.50 3.01
3890 4015 9.794685 GGAAAAGAAATGATTCCTATTGACTTC 57.205 33.333 0.00 0.00 39.60 3.01
3893 4018 8.517062 AAGAAATGATTCCTATTGACTTCAGG 57.483 34.615 0.00 0.00 36.12 3.86
3894 4019 7.059156 AGAAATGATTCCTATTGACTTCAGGG 58.941 38.462 0.00 0.00 36.12 4.45
3895 4020 6.581388 AATGATTCCTATTGACTTCAGGGA 57.419 37.500 0.00 0.00 0.00 4.20
3896 4021 6.581388 ATGATTCCTATTGACTTCAGGGAA 57.419 37.500 10.63 10.63 36.28 3.97
3897 4022 6.387192 TGATTCCTATTGACTTCAGGGAAA 57.613 37.500 11.65 0.00 35.86 3.13
3898 4023 6.789268 TGATTCCTATTGACTTCAGGGAAAA 58.211 36.000 11.65 4.67 35.86 2.29
3899 4024 7.237982 TGATTCCTATTGACTTCAGGGAAAAA 58.762 34.615 11.65 4.43 35.86 1.94
3918 4043 3.668596 AAAACACAAGTTTCCGTCTCG 57.331 42.857 0.00 0.00 46.79 4.04
3919 4044 2.589798 AACACAAGTTTCCGTCTCGA 57.410 45.000 0.00 0.00 33.11 4.04
3920 4045 1.849097 ACACAAGTTTCCGTCTCGAC 58.151 50.000 0.00 0.00 0.00 4.20
3921 4046 3.360745 AACACAAGTTTCCGTCTCGACG 61.361 50.000 12.19 12.19 44.11 5.12
3922 4047 5.574278 AACACAAGTTTCCGTCTCGACGA 62.574 47.826 19.91 0.00 45.98 4.20
3923 4048 6.800632 AACACAAGTTTCCGTCTCGACGAT 62.801 45.833 19.91 0.00 45.98 3.73
3936 4061 6.249478 GTCTCGACGATCTTCAAAACTATG 57.751 41.667 0.00 0.00 0.00 2.23
3937 4062 5.800941 GTCTCGACGATCTTCAAAACTATGT 59.199 40.000 0.00 0.00 0.00 2.29
3938 4063 6.308282 GTCTCGACGATCTTCAAAACTATGTT 59.692 38.462 0.00 0.00 0.00 2.71
3939 4064 6.308041 TCTCGACGATCTTCAAAACTATGTTG 59.692 38.462 0.00 0.00 0.00 3.33
3940 4065 6.153756 TCGACGATCTTCAAAACTATGTTGA 58.846 36.000 0.00 0.00 33.21 3.18
3941 4066 6.811665 TCGACGATCTTCAAAACTATGTTGAT 59.188 34.615 0.00 0.00 35.03 2.57
3942 4067 7.971722 TCGACGATCTTCAAAACTATGTTGATA 59.028 33.333 0.00 0.00 35.03 2.15
3943 4068 8.755941 CGACGATCTTCAAAACTATGTTGATAT 58.244 33.333 0.00 0.00 35.03 1.63
3944 4069 9.855361 GACGATCTTCAAAACTATGTTGATATG 57.145 33.333 0.00 0.00 35.03 1.78
3945 4070 9.383519 ACGATCTTCAAAACTATGTTGATATGT 57.616 29.630 0.00 0.00 35.03 2.29
3997 4122 3.290948 TGGATAATTCCCACTTTCCCG 57.709 47.619 0.00 0.00 41.83 5.14
3998 4123 2.847449 TGGATAATTCCCACTTTCCCGA 59.153 45.455 0.00 0.00 41.83 5.14
3999 4124 3.267291 TGGATAATTCCCACTTTCCCGAA 59.733 43.478 0.00 0.00 41.83 4.30
4000 4125 3.630769 GGATAATTCCCACTTTCCCGAAC 59.369 47.826 0.00 0.00 35.84 3.95
4001 4126 1.919240 AATTCCCACTTTCCCGAACC 58.081 50.000 0.00 0.00 0.00 3.62
4002 4127 0.322187 ATTCCCACTTTCCCGAACCG 60.322 55.000 0.00 0.00 0.00 4.44
4003 4128 1.698067 TTCCCACTTTCCCGAACCGT 61.698 55.000 0.00 0.00 0.00 4.83
4004 4129 1.670083 CCCACTTTCCCGAACCGTC 60.670 63.158 0.00 0.00 0.00 4.79
4006 4131 1.300388 CACTTTCCCGAACCGTCGT 60.300 57.895 0.00 0.00 46.21 4.34
4007 4132 0.039256 CACTTTCCCGAACCGTCGTA 60.039 55.000 0.00 0.00 46.21 3.43
4008 4133 0.242017 ACTTTCCCGAACCGTCGTAG 59.758 55.000 0.00 0.00 46.21 3.51
4009 4134 1.074872 CTTTCCCGAACCGTCGTAGC 61.075 60.000 0.00 0.00 46.21 3.58
4010 4135 1.804396 TTTCCCGAACCGTCGTAGCA 61.804 55.000 0.00 0.00 46.21 3.49
4011 4136 2.202570 CCCGAACCGTCGTAGCAG 60.203 66.667 0.00 0.00 46.21 4.24
4012 4137 2.564975 CCGAACCGTCGTAGCAGT 59.435 61.111 0.00 0.00 46.21 4.40
4013 4138 1.080974 CCGAACCGTCGTAGCAGTT 60.081 57.895 0.00 0.00 46.21 3.16
4014 4139 0.665369 CCGAACCGTCGTAGCAGTTT 60.665 55.000 0.00 0.00 46.21 2.66
4015 4140 0.706729 CGAACCGTCGTAGCAGTTTC 59.293 55.000 0.00 0.00 42.53 2.78
4016 4141 1.066136 GAACCGTCGTAGCAGTTTCC 58.934 55.000 0.00 0.00 0.00 3.13
4017 4142 0.320160 AACCGTCGTAGCAGTTTCCC 60.320 55.000 0.00 0.00 0.00 3.97
4018 4143 1.183676 ACCGTCGTAGCAGTTTCCCT 61.184 55.000 0.00 0.00 0.00 4.20
4019 4144 0.736325 CCGTCGTAGCAGTTTCCCTG 60.736 60.000 0.00 0.00 44.53 4.45
4020 4145 0.736325 CGTCGTAGCAGTTTCCCTGG 60.736 60.000 0.00 0.00 41.81 4.45
4021 4146 0.606604 GTCGTAGCAGTTTCCCTGGA 59.393 55.000 0.00 0.00 41.81 3.86
4022 4147 0.895530 TCGTAGCAGTTTCCCTGGAG 59.104 55.000 0.00 0.00 41.81 3.86
4023 4148 0.741221 CGTAGCAGTTTCCCTGGAGC 60.741 60.000 0.00 0.00 41.81 4.70
4024 4149 0.324943 GTAGCAGTTTCCCTGGAGCA 59.675 55.000 0.00 0.00 41.81 4.26
4025 4150 0.615331 TAGCAGTTTCCCTGGAGCAG 59.385 55.000 0.00 0.00 41.81 4.24
4026 4151 1.130054 AGCAGTTTCCCTGGAGCAGA 61.130 55.000 0.00 0.00 41.81 4.26
4027 4152 0.676151 GCAGTTTCCCTGGAGCAGAG 60.676 60.000 0.00 0.00 41.81 3.35
4028 4153 0.676151 CAGTTTCCCTGGAGCAGAGC 60.676 60.000 0.00 0.00 37.54 4.09
4029 4154 0.839853 AGTTTCCCTGGAGCAGAGCT 60.840 55.000 0.00 0.00 43.88 4.09
4030 4155 0.905357 GTTTCCCTGGAGCAGAGCTA 59.095 55.000 0.00 0.00 39.88 3.32
4031 4156 0.905357 TTTCCCTGGAGCAGAGCTAC 59.095 55.000 0.00 0.00 39.88 3.58
4037 4162 1.107114 TGGAGCAGAGCTACAGTAGC 58.893 55.000 23.17 23.17 45.48 3.58
4044 4169 2.956964 GCTACAGTAGCCGCGCAG 60.957 66.667 20.53 0.00 45.95 5.18
4045 4170 2.490217 CTACAGTAGCCGCGCAGT 59.510 61.111 8.75 0.00 0.00 4.40
4046 4171 1.874019 CTACAGTAGCCGCGCAGTG 60.874 63.158 8.75 3.13 38.04 3.66
4055 4180 2.125552 CGCGCAGTGGGATTCAGA 60.126 61.111 12.03 0.00 0.00 3.27
4056 4181 2.169789 CGCGCAGTGGGATTCAGAG 61.170 63.158 12.03 0.00 0.00 3.35
4057 4182 1.219124 GCGCAGTGGGATTCAGAGA 59.781 57.895 12.03 0.00 0.00 3.10
4058 4183 0.391661 GCGCAGTGGGATTCAGAGAA 60.392 55.000 12.03 0.00 0.00 2.87
4059 4184 1.649664 CGCAGTGGGATTCAGAGAAG 58.350 55.000 0.00 0.00 0.00 2.85
4060 4185 1.741732 CGCAGTGGGATTCAGAGAAGG 60.742 57.143 0.00 0.00 0.00 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.058595 CCACCCCACTAGCTACGCT 61.059 63.158 0.00 0.00 43.41 5.07
1 2 2.499685 CCACCCCACTAGCTACGC 59.500 66.667 0.00 0.00 0.00 4.42
2 3 2.432300 CCCCACCCCACTAGCTACG 61.432 68.421 0.00 0.00 0.00 3.51
3 4 2.070650 CCCCCACCCCACTAGCTAC 61.071 68.421 0.00 0.00 0.00 3.58
4 5 2.371043 CCCCCACCCCACTAGCTA 59.629 66.667 0.00 0.00 0.00 3.32
22 23 4.391601 TAACGGCCGTTTCCCCCG 62.392 66.667 44.79 10.47 46.97 5.73
23 24 2.437180 CTAACGGCCGTTTCCCCC 60.437 66.667 44.79 0.00 39.31 5.40
24 25 2.437180 CCTAACGGCCGTTTCCCC 60.437 66.667 44.79 0.00 39.31 4.81
25 26 1.302752 AACCTAACGGCCGTTTCCC 60.303 57.895 44.79 0.00 39.31 3.97
26 27 1.579964 CCAACCTAACGGCCGTTTCC 61.580 60.000 44.79 0.00 39.31 3.13
27 28 1.871077 CCAACCTAACGGCCGTTTC 59.129 57.895 44.79 0.00 39.31 2.78
28 29 2.263021 GCCAACCTAACGGCCGTTT 61.263 57.895 44.79 27.28 42.82 3.60
29 30 2.670592 GCCAACCTAACGGCCGTT 60.671 61.111 41.91 41.91 42.82 4.44
34 35 3.821421 AGAGAATAGCCAACCTAACGG 57.179 47.619 0.00 0.00 0.00 4.44
35 36 4.935808 ACAAAGAGAATAGCCAACCTAACG 59.064 41.667 0.00 0.00 0.00 3.18
36 37 5.063564 CGACAAAGAGAATAGCCAACCTAAC 59.936 44.000 0.00 0.00 0.00 2.34
37 38 5.175859 CGACAAAGAGAATAGCCAACCTAA 58.824 41.667 0.00 0.00 0.00 2.69
38 39 4.222145 ACGACAAAGAGAATAGCCAACCTA 59.778 41.667 0.00 0.00 0.00 3.08
39 40 3.008049 ACGACAAAGAGAATAGCCAACCT 59.992 43.478 0.00 0.00 0.00 3.50
40 41 3.335579 ACGACAAAGAGAATAGCCAACC 58.664 45.455 0.00 0.00 0.00 3.77
41 42 4.092091 CAGACGACAAAGAGAATAGCCAAC 59.908 45.833 0.00 0.00 0.00 3.77
42 43 4.245660 CAGACGACAAAGAGAATAGCCAA 58.754 43.478 0.00 0.00 0.00 4.52
43 44 3.849911 CAGACGACAAAGAGAATAGCCA 58.150 45.455 0.00 0.00 0.00 4.75
44 45 2.605366 GCAGACGACAAAGAGAATAGCC 59.395 50.000 0.00 0.00 0.00 3.93
45 46 3.516615 AGCAGACGACAAAGAGAATAGC 58.483 45.455 0.00 0.00 0.00 2.97
46 47 3.788694 CGAGCAGACGACAAAGAGAATAG 59.211 47.826 0.00 0.00 35.09 1.73
47 48 3.759418 CGAGCAGACGACAAAGAGAATA 58.241 45.455 0.00 0.00 35.09 1.75
48 49 2.600731 CGAGCAGACGACAAAGAGAAT 58.399 47.619 0.00 0.00 35.09 2.40
49 50 1.930817 GCGAGCAGACGACAAAGAGAA 60.931 52.381 0.00 0.00 35.09 2.87
50 51 0.387367 GCGAGCAGACGACAAAGAGA 60.387 55.000 0.00 0.00 35.09 3.10
51 52 1.669158 CGCGAGCAGACGACAAAGAG 61.669 60.000 0.00 0.00 35.09 2.85
52 53 1.729484 CGCGAGCAGACGACAAAGA 60.729 57.895 0.00 0.00 35.09 2.52
53 54 2.720758 CCGCGAGCAGACGACAAAG 61.721 63.158 8.23 0.00 35.09 2.77
54 55 2.733218 CCGCGAGCAGACGACAAA 60.733 61.111 8.23 0.00 35.09 2.83
55 56 3.666253 TCCGCGAGCAGACGACAA 61.666 61.111 8.23 0.00 35.09 3.18
56 57 4.400109 GTCCGCGAGCAGACGACA 62.400 66.667 8.23 0.00 35.09 4.35
69 70 2.358737 AAAGCTTCCTGCCGTCCG 60.359 61.111 0.00 0.00 44.23 4.79
70 71 2.982744 GCAAAGCTTCCTGCCGTCC 61.983 63.158 11.37 0.00 44.23 4.79
71 72 2.563427 GCAAAGCTTCCTGCCGTC 59.437 61.111 11.37 0.00 44.23 4.79
75 76 1.968540 AGACGGCAAAGCTTCCTGC 60.969 57.895 13.65 13.65 43.29 4.85
76 77 1.871772 CAGACGGCAAAGCTTCCTG 59.128 57.895 0.00 1.62 0.00 3.86
77 78 1.968540 GCAGACGGCAAAGCTTCCT 60.969 57.895 0.00 0.00 43.97 3.36
78 79 2.563427 GCAGACGGCAAAGCTTCC 59.437 61.111 0.00 0.00 43.97 3.46
83 84 0.390340 TCTGCTAGCAGACGGCAAAG 60.390 55.000 37.64 15.06 46.80 2.77
84 85 1.671166 TCTGCTAGCAGACGGCAAA 59.329 52.632 37.64 18.34 46.80 3.68
85 86 3.376546 TCTGCTAGCAGACGGCAA 58.623 55.556 37.64 19.05 46.80 4.52
92 93 0.390340 TCTTTGCCGTCTGCTAGCAG 60.390 55.000 34.48 34.48 44.86 4.24
93 94 0.034756 TTCTTTGCCGTCTGCTAGCA 59.965 50.000 18.22 18.22 42.00 3.49
94 95 1.129437 CTTTCTTTGCCGTCTGCTAGC 59.871 52.381 8.10 8.10 42.00 3.42
95 96 2.158449 CACTTTCTTTGCCGTCTGCTAG 59.842 50.000 0.00 0.00 42.00 3.42
96 97 2.143122 CACTTTCTTTGCCGTCTGCTA 58.857 47.619 0.00 0.00 42.00 3.49
97 98 0.947244 CACTTTCTTTGCCGTCTGCT 59.053 50.000 0.00 0.00 42.00 4.24
98 99 0.040067 CCACTTTCTTTGCCGTCTGC 60.040 55.000 0.00 0.00 41.77 4.26
99 100 0.040067 GCCACTTTCTTTGCCGTCTG 60.040 55.000 0.00 0.00 0.00 3.51
100 101 0.179018 AGCCACTTTCTTTGCCGTCT 60.179 50.000 0.00 0.00 0.00 4.18
101 102 0.040067 CAGCCACTTTCTTTGCCGTC 60.040 55.000 0.00 0.00 0.00 4.79
102 103 0.751643 ACAGCCACTTTCTTTGCCGT 60.752 50.000 0.00 0.00 0.00 5.68
103 104 0.385390 AACAGCCACTTTCTTTGCCG 59.615 50.000 0.00 0.00 0.00 5.69
104 105 2.029918 CCTAACAGCCACTTTCTTTGCC 60.030 50.000 0.00 0.00 0.00 4.52
105 106 2.623416 ACCTAACAGCCACTTTCTTTGC 59.377 45.455 0.00 0.00 0.00 3.68
106 107 5.063880 ACTACCTAACAGCCACTTTCTTTG 58.936 41.667 0.00 0.00 0.00 2.77
107 108 5.306114 ACTACCTAACAGCCACTTTCTTT 57.694 39.130 0.00 0.00 0.00 2.52
108 109 4.976540 ACTACCTAACAGCCACTTTCTT 57.023 40.909 0.00 0.00 0.00 2.52
109 110 4.593634 AGAACTACCTAACAGCCACTTTCT 59.406 41.667 0.00 0.00 0.00 2.52
110 111 4.895961 AGAACTACCTAACAGCCACTTTC 58.104 43.478 0.00 0.00 0.00 2.62
111 112 4.560919 CGAGAACTACCTAACAGCCACTTT 60.561 45.833 0.00 0.00 0.00 2.66
112 113 3.056749 CGAGAACTACCTAACAGCCACTT 60.057 47.826 0.00 0.00 0.00 3.16
113 114 2.492484 CGAGAACTACCTAACAGCCACT 59.508 50.000 0.00 0.00 0.00 4.00
114 115 2.230750 ACGAGAACTACCTAACAGCCAC 59.769 50.000 0.00 0.00 0.00 5.01
115 116 2.522185 ACGAGAACTACCTAACAGCCA 58.478 47.619 0.00 0.00 0.00 4.75
116 117 3.589495 AACGAGAACTACCTAACAGCC 57.411 47.619 0.00 0.00 0.00 4.85
117 118 5.094134 CACTAACGAGAACTACCTAACAGC 58.906 45.833 0.00 0.00 0.00 4.40
118 119 5.392811 CCCACTAACGAGAACTACCTAACAG 60.393 48.000 0.00 0.00 0.00 3.16
119 120 4.460382 CCCACTAACGAGAACTACCTAACA 59.540 45.833 0.00 0.00 0.00 2.41
120 121 4.676459 GCCCACTAACGAGAACTACCTAAC 60.676 50.000 0.00 0.00 0.00 2.34
121 122 3.445096 GCCCACTAACGAGAACTACCTAA 59.555 47.826 0.00 0.00 0.00 2.69
122 123 3.019564 GCCCACTAACGAGAACTACCTA 58.980 50.000 0.00 0.00 0.00 3.08
123 124 1.823610 GCCCACTAACGAGAACTACCT 59.176 52.381 0.00 0.00 0.00 3.08
124 125 1.134877 GGCCCACTAACGAGAACTACC 60.135 57.143 0.00 0.00 0.00 3.18
125 126 1.547372 TGGCCCACTAACGAGAACTAC 59.453 52.381 0.00 0.00 0.00 2.73
126 127 1.547372 GTGGCCCACTAACGAGAACTA 59.453 52.381 6.63 0.00 0.00 2.24
127 128 0.320697 GTGGCCCACTAACGAGAACT 59.679 55.000 6.63 0.00 0.00 3.01
128 129 0.672711 GGTGGCCCACTAACGAGAAC 60.673 60.000 14.71 0.00 34.40 3.01
129 130 1.675219 GGTGGCCCACTAACGAGAA 59.325 57.895 14.71 0.00 34.40 2.87
130 131 2.288025 GGGTGGCCCACTAACGAGA 61.288 63.158 14.71 0.00 44.65 4.04
131 132 2.267961 GGGTGGCCCACTAACGAG 59.732 66.667 14.71 0.00 44.65 4.18
140 141 1.913262 CAAAAAGGGAGGGTGGCCC 60.913 63.158 0.00 0.00 45.90 5.80
141 142 1.152333 ACAAAAAGGGAGGGTGGCC 60.152 57.895 0.00 0.00 0.00 5.36
142 143 1.524008 CGACAAAAAGGGAGGGTGGC 61.524 60.000 0.00 0.00 0.00 5.01
143 144 0.179001 ACGACAAAAAGGGAGGGTGG 60.179 55.000 0.00 0.00 0.00 4.61
144 145 1.202770 AGACGACAAAAAGGGAGGGTG 60.203 52.381 0.00 0.00 0.00 4.61
145 146 1.137697 AGACGACAAAAAGGGAGGGT 58.862 50.000 0.00 0.00 0.00 4.34
146 147 1.523758 CAGACGACAAAAAGGGAGGG 58.476 55.000 0.00 0.00 0.00 4.30
147 148 0.875059 GCAGACGACAAAAAGGGAGG 59.125 55.000 0.00 0.00 0.00 4.30
148 149 1.884235 AGCAGACGACAAAAAGGGAG 58.116 50.000 0.00 0.00 0.00 4.30
149 150 2.870435 GCTAGCAGACGACAAAAAGGGA 60.870 50.000 10.63 0.00 0.00 4.20
150 151 1.464997 GCTAGCAGACGACAAAAAGGG 59.535 52.381 10.63 0.00 0.00 3.95
151 152 2.143122 TGCTAGCAGACGACAAAAAGG 58.857 47.619 14.93 0.00 0.00 3.11
152 153 3.059884 TCTGCTAGCAGACGACAAAAAG 58.940 45.455 37.64 13.84 46.80 2.27
153 154 3.106242 TCTGCTAGCAGACGACAAAAA 57.894 42.857 37.64 16.91 46.80 1.94
154 155 2.812358 TCTGCTAGCAGACGACAAAA 57.188 45.000 37.64 17.62 46.80 2.44
163 164 0.390340 TCTTTGCCGTCTGCTAGCAG 60.390 55.000 34.48 34.48 44.86 4.24
164 165 0.390340 CTCTTTGCCGTCTGCTAGCA 60.390 55.000 18.22 18.22 42.00 3.49
165 166 1.700600 GCTCTTTGCCGTCTGCTAGC 61.701 60.000 8.10 8.10 42.00 3.42
166 167 0.108424 AGCTCTTTGCCGTCTGCTAG 60.108 55.000 0.00 0.00 44.23 3.42
167 168 0.390340 CAGCTCTTTGCCGTCTGCTA 60.390 55.000 0.00 0.00 44.23 3.49
168 169 1.670406 CAGCTCTTTGCCGTCTGCT 60.670 57.895 0.00 0.00 44.23 4.24
169 170 2.684843 CCAGCTCTTTGCCGTCTGC 61.685 63.158 0.00 0.00 44.23 4.26
170 171 2.684843 GCCAGCTCTTTGCCGTCTG 61.685 63.158 0.00 0.00 44.23 3.51
171 172 2.359230 GCCAGCTCTTTGCCGTCT 60.359 61.111 0.00 0.00 44.23 4.18
172 173 2.359230 AGCCAGCTCTTTGCCGTC 60.359 61.111 0.00 0.00 44.23 4.79
173 174 2.670934 CAGCCAGCTCTTTGCCGT 60.671 61.111 0.00 0.00 44.23 5.68
174 175 2.359107 TCAGCCAGCTCTTTGCCG 60.359 61.111 0.00 0.00 44.23 5.69
175 176 2.684843 CGTCAGCCAGCTCTTTGCC 61.685 63.158 0.00 0.00 44.23 4.52
176 177 2.684843 CCGTCAGCCAGCTCTTTGC 61.685 63.158 0.00 0.00 43.29 3.68
177 178 2.684843 GCCGTCAGCCAGCTCTTTG 61.685 63.158 0.00 0.00 34.35 2.77
178 179 2.359230 GCCGTCAGCCAGCTCTTT 60.359 61.111 0.00 0.00 34.35 2.52
179 180 2.680974 TTTGCCGTCAGCCAGCTCTT 62.681 55.000 0.00 0.00 42.71 2.85
180 181 2.475371 ATTTGCCGTCAGCCAGCTCT 62.475 55.000 0.00 0.00 42.71 4.09
181 182 0.744414 TATTTGCCGTCAGCCAGCTC 60.744 55.000 0.00 0.00 42.71 4.09
182 183 0.107017 ATATTTGCCGTCAGCCAGCT 60.107 50.000 0.00 0.00 42.71 4.24
183 184 0.029834 CATATTTGCCGTCAGCCAGC 59.970 55.000 0.00 0.00 42.71 4.85
184 185 0.664761 CCATATTTGCCGTCAGCCAG 59.335 55.000 0.00 0.00 42.71 4.85
185 186 0.034574 ACCATATTTGCCGTCAGCCA 60.035 50.000 0.00 0.00 42.71 4.75
186 187 0.663153 GACCATATTTGCCGTCAGCC 59.337 55.000 0.00 0.00 42.71 4.85
187 188 1.668419 AGACCATATTTGCCGTCAGC 58.332 50.000 0.00 0.00 44.14 4.26
188 189 3.440173 ACAAAGACCATATTTGCCGTCAG 59.560 43.478 0.00 0.00 40.54 3.51
189 190 3.190327 CACAAAGACCATATTTGCCGTCA 59.810 43.478 0.00 0.00 40.54 4.35
190 191 3.758300 CACAAAGACCATATTTGCCGTC 58.242 45.455 0.00 0.00 40.54 4.79
191 192 2.094752 GCACAAAGACCATATTTGCCGT 60.095 45.455 0.00 0.00 40.54 5.68
192 193 2.164219 AGCACAAAGACCATATTTGCCG 59.836 45.455 0.00 0.00 40.54 5.69
193 194 3.445096 AGAGCACAAAGACCATATTTGCC 59.555 43.478 0.00 0.00 40.54 4.52
194 195 4.708726 AGAGCACAAAGACCATATTTGC 57.291 40.909 0.00 0.00 40.54 3.68
195 196 6.917533 AGAAAGAGCACAAAGACCATATTTG 58.082 36.000 0.00 0.00 42.17 2.32
196 197 7.530426 AAGAAAGAGCACAAAGACCATATTT 57.470 32.000 0.00 0.00 0.00 1.40
197 198 7.373493 CAAAGAAAGAGCACAAAGACCATATT 58.627 34.615 0.00 0.00 0.00 1.28
198 199 6.571150 GCAAAGAAAGAGCACAAAGACCATAT 60.571 38.462 0.00 0.00 0.00 1.78
199 200 5.278463 GCAAAGAAAGAGCACAAAGACCATA 60.278 40.000 0.00 0.00 0.00 2.74
200 201 4.500375 GCAAAGAAAGAGCACAAAGACCAT 60.500 41.667 0.00 0.00 0.00 3.55
201 202 3.181487 GCAAAGAAAGAGCACAAAGACCA 60.181 43.478 0.00 0.00 0.00 4.02
202 203 3.375642 GCAAAGAAAGAGCACAAAGACC 58.624 45.455 0.00 0.00 0.00 3.85
203 204 3.375642 GGCAAAGAAAGAGCACAAAGAC 58.624 45.455 0.00 0.00 0.00 3.01
204 205 2.033299 CGGCAAAGAAAGAGCACAAAGA 59.967 45.455 0.00 0.00 0.00 2.52
205 206 2.223572 ACGGCAAAGAAAGAGCACAAAG 60.224 45.455 0.00 0.00 0.00 2.77
206 207 1.748493 ACGGCAAAGAAAGAGCACAAA 59.252 42.857 0.00 0.00 0.00 2.83
207 208 1.333619 GACGGCAAAGAAAGAGCACAA 59.666 47.619 0.00 0.00 0.00 3.33
208 209 0.944386 GACGGCAAAGAAAGAGCACA 59.056 50.000 0.00 0.00 0.00 4.57
209 210 0.944386 TGACGGCAAAGAAAGAGCAC 59.056 50.000 0.00 0.00 0.00 4.40
210 211 1.229428 CTGACGGCAAAGAAAGAGCA 58.771 50.000 0.00 0.00 0.00 4.26
211 212 0.110010 GCTGACGGCAAAGAAAGAGC 60.110 55.000 0.00 0.00 41.35 4.09
212 213 1.517242 AGCTGACGGCAAAGAAAGAG 58.483 50.000 9.39 0.00 44.79 2.85
213 214 2.688507 CTAGCTGACGGCAAAGAAAGA 58.311 47.619 9.39 0.00 44.79 2.52
214 215 1.129437 GCTAGCTGACGGCAAAGAAAG 59.871 52.381 7.70 0.00 44.79 2.62
215 216 1.156736 GCTAGCTGACGGCAAAGAAA 58.843 50.000 7.70 0.00 44.79 2.52
216 217 0.034756 TGCTAGCTGACGGCAAAGAA 59.965 50.000 17.23 0.00 44.79 2.52
217 218 0.390340 CTGCTAGCTGACGGCAAAGA 60.390 55.000 17.23 0.00 44.79 2.52
218 219 0.390340 TCTGCTAGCTGACGGCAAAG 60.390 55.000 19.26 6.65 44.79 2.77
219 220 0.670546 GTCTGCTAGCTGACGGCAAA 60.671 55.000 30.98 5.98 44.79 3.68
220 221 1.079819 GTCTGCTAGCTGACGGCAA 60.080 57.895 30.98 6.66 44.79 4.52
221 222 2.573869 GTCTGCTAGCTGACGGCA 59.426 61.111 30.98 7.33 44.79 5.69
225 226 0.670546 TTTGCCGTCTGCTAGCTGAC 60.671 55.000 33.23 33.23 42.00 3.51
226 227 0.034756 TTTTGCCGTCTGCTAGCTGA 59.965 50.000 19.26 19.26 42.00 4.26
227 228 0.874390 TTTTTGCCGTCTGCTAGCTG 59.126 50.000 17.23 16.05 42.00 4.24
228 229 1.160137 CTTTTTGCCGTCTGCTAGCT 58.840 50.000 17.23 0.00 42.00 3.32
229 230 0.455126 GCTTTTTGCCGTCTGCTAGC 60.455 55.000 8.10 8.10 42.00 3.42
230 231 1.135859 CAGCTTTTTGCCGTCTGCTAG 60.136 52.381 0.00 0.00 44.23 3.42
231 232 0.874390 CAGCTTTTTGCCGTCTGCTA 59.126 50.000 0.00 0.00 44.23 3.49
232 233 1.656441 CAGCTTTTTGCCGTCTGCT 59.344 52.632 0.00 0.00 44.23 4.24
233 234 1.372128 CCAGCTTTTTGCCGTCTGC 60.372 57.895 0.00 0.00 44.23 4.26
234 235 1.372128 GCCAGCTTTTTGCCGTCTG 60.372 57.895 0.00 0.00 44.23 3.51
235 236 1.529244 AGCCAGCTTTTTGCCGTCT 60.529 52.632 0.00 0.00 44.23 4.18
236 237 1.372128 CAGCCAGCTTTTTGCCGTC 60.372 57.895 0.00 0.00 44.23 4.79
237 238 1.827789 TCAGCCAGCTTTTTGCCGT 60.828 52.632 0.00 0.00 44.23 5.68
238 239 1.372128 GTCAGCCAGCTTTTTGCCG 60.372 57.895 0.00 0.00 44.23 5.69
239 240 1.372128 CGTCAGCCAGCTTTTTGCC 60.372 57.895 0.00 0.00 44.23 4.52
240 241 0.661483 GTCGTCAGCCAGCTTTTTGC 60.661 55.000 0.00 0.00 43.29 3.68
241 242 0.662619 TGTCGTCAGCCAGCTTTTTG 59.337 50.000 0.00 0.00 0.00 2.44
242 243 1.388547 TTGTCGTCAGCCAGCTTTTT 58.611 45.000 0.00 0.00 0.00 1.94
243 244 1.334869 CTTTGTCGTCAGCCAGCTTTT 59.665 47.619 0.00 0.00 0.00 2.27
244 245 0.947244 CTTTGTCGTCAGCCAGCTTT 59.053 50.000 0.00 0.00 0.00 3.51
245 246 0.106708 TCTTTGTCGTCAGCCAGCTT 59.893 50.000 0.00 0.00 0.00 3.74
246 247 0.322975 ATCTTTGTCGTCAGCCAGCT 59.677 50.000 0.00 0.00 0.00 4.24
247 248 0.723981 GATCTTTGTCGTCAGCCAGC 59.276 55.000 0.00 0.00 0.00 4.85
248 249 1.066573 AGGATCTTTGTCGTCAGCCAG 60.067 52.381 0.00 0.00 0.00 4.85
249 250 0.976641 AGGATCTTTGTCGTCAGCCA 59.023 50.000 0.00 0.00 0.00 4.75
250 251 1.066858 TCAGGATCTTTGTCGTCAGCC 60.067 52.381 0.00 0.00 0.00 4.85
251 252 2.370281 TCAGGATCTTTGTCGTCAGC 57.630 50.000 0.00 0.00 0.00 4.26
252 253 3.868077 GGAATCAGGATCTTTGTCGTCAG 59.132 47.826 0.00 0.00 0.00 3.51
253 254 3.260632 TGGAATCAGGATCTTTGTCGTCA 59.739 43.478 0.00 0.00 0.00 4.35
254 255 3.861840 TGGAATCAGGATCTTTGTCGTC 58.138 45.455 0.00 0.00 0.00 4.20
255 256 3.261897 ACTGGAATCAGGATCTTTGTCGT 59.738 43.478 0.00 0.00 44.99 4.34
256 257 3.866651 ACTGGAATCAGGATCTTTGTCG 58.133 45.455 0.00 0.00 44.99 4.35
257 258 5.814705 CACTACTGGAATCAGGATCTTTGTC 59.185 44.000 0.00 0.00 44.99 3.18
258 259 5.485353 TCACTACTGGAATCAGGATCTTTGT 59.515 40.000 0.00 0.00 44.99 2.83
259 260 5.982356 TCACTACTGGAATCAGGATCTTTG 58.018 41.667 0.00 0.00 44.99 2.77
260 261 6.821616 ATCACTACTGGAATCAGGATCTTT 57.178 37.500 0.00 0.00 44.99 2.52
261 262 6.015856 CGTATCACTACTGGAATCAGGATCTT 60.016 42.308 0.00 0.00 44.99 2.40
262 263 5.475220 CGTATCACTACTGGAATCAGGATCT 59.525 44.000 0.00 0.00 44.99 2.75
263 264 5.241949 ACGTATCACTACTGGAATCAGGATC 59.758 44.000 0.00 0.00 44.99 3.36
264 265 5.141182 ACGTATCACTACTGGAATCAGGAT 58.859 41.667 0.00 0.00 44.99 3.24
265 266 4.533815 ACGTATCACTACTGGAATCAGGA 58.466 43.478 0.00 0.00 44.99 3.86
266 267 4.920640 ACGTATCACTACTGGAATCAGG 57.079 45.455 0.00 0.00 44.99 3.86
267 268 5.891451 TGAACGTATCACTACTGGAATCAG 58.109 41.667 0.00 0.00 38.92 2.90
268 269 5.907866 TGAACGTATCACTACTGGAATCA 57.092 39.130 0.00 0.00 31.50 2.57
269 270 6.097356 TGTTGAACGTATCACTACTGGAATC 58.903 40.000 0.00 0.00 37.92 2.52
270 271 6.032956 TGTTGAACGTATCACTACTGGAAT 57.967 37.500 0.00 0.00 37.92 3.01
271 272 5.456548 TGTTGAACGTATCACTACTGGAA 57.543 39.130 0.00 0.00 37.92 3.53
272 273 5.654603 ATGTTGAACGTATCACTACTGGA 57.345 39.130 0.00 0.00 37.92 3.86
273 274 5.637810 ACAATGTTGAACGTATCACTACTGG 59.362 40.000 0.00 0.00 37.92 4.00
274 275 6.183360 GGACAATGTTGAACGTATCACTACTG 60.183 42.308 0.00 0.00 37.92 2.74
275 276 5.867716 GGACAATGTTGAACGTATCACTACT 59.132 40.000 0.00 0.00 37.92 2.57
276 277 5.220154 CGGACAATGTTGAACGTATCACTAC 60.220 44.000 0.00 0.00 37.92 2.73
277 278 4.860352 CGGACAATGTTGAACGTATCACTA 59.140 41.667 0.00 0.00 37.92 2.74
278 279 3.678072 CGGACAATGTTGAACGTATCACT 59.322 43.478 0.00 0.00 37.92 3.41
279 280 3.676172 TCGGACAATGTTGAACGTATCAC 59.324 43.478 0.00 0.00 37.92 3.06
280 281 3.915536 TCGGACAATGTTGAACGTATCA 58.084 40.909 0.00 0.00 35.85 2.15
281 282 4.634991 GTTCGGACAATGTTGAACGTATC 58.365 43.478 13.80 0.00 32.38 2.24
616 631 4.096984 CAGCCTGTTTTCTGTTTTCTCACT 59.903 41.667 0.00 0.00 0.00 3.41
621 636 3.119137 ACACCAGCCTGTTTTCTGTTTTC 60.119 43.478 0.00 0.00 0.00 2.29
689 704 2.346365 GAGCGAACCGAACCCCTT 59.654 61.111 0.00 0.00 0.00 3.95
760 776 2.636299 GCGTTGGGCTAGTTTTCCA 58.364 52.632 0.00 0.00 39.11 3.53
775 793 1.522355 CGATGGAGGAATGCAGCGT 60.522 57.895 0.00 0.00 0.00 5.07
940 968 0.391661 GTTTGGAGCTCTGGATGCGA 60.392 55.000 14.64 0.00 35.28 5.10
984 1012 4.488911 ATGGCCTCTCCCTCCGCT 62.489 66.667 3.32 0.00 0.00 5.52
1346 1389 9.113876 CATACGAGAACCAAACAAAAGAAATAC 57.886 33.333 0.00 0.00 0.00 1.89
1354 1397 3.880490 AGCACATACGAGAACCAAACAAA 59.120 39.130 0.00 0.00 0.00 2.83
1474 1517 7.009568 AGCATAGATCACAGAAACGAAATTC 57.990 36.000 0.00 0.00 0.00 2.17
1612 1667 7.824779 AGTTCCGGGATAAAGATCTATAAATGC 59.175 37.037 0.00 0.00 32.15 3.56
1681 1736 3.942748 TGCCTACGAAACAAAAGAACTGT 59.057 39.130 0.00 0.00 0.00 3.55
1830 1885 4.780324 GCAATCAGTAACAAAGAGCGATCG 60.780 45.833 11.69 11.69 0.00 3.69
1871 1926 1.340405 ACTGCAAAGCATGGTCCTAGG 60.340 52.381 0.82 0.82 38.13 3.02
2236 2294 2.231478 AGAAGAAGTGCGCTAGCTACAA 59.769 45.455 13.93 0.00 45.42 2.41
2319 2377 7.878127 ACCACATAAGTATGAATATAGCACACC 59.122 37.037 5.33 0.00 37.15 4.16
2340 2398 8.967664 AGTATTTGTTACTCTAAACAACCACA 57.032 30.769 1.86 0.00 46.20 4.17
2354 2412 5.046520 ACAGGACAGAGGGAGTATTTGTTAC 60.047 44.000 0.00 0.00 0.00 2.50
2594 2655 3.575965 AAAAGCCGGACTTGCAATTAG 57.424 42.857 5.05 0.00 39.09 1.73
2777 2838 5.475719 TCTAAGGACCAGTAACAAATCACG 58.524 41.667 0.00 0.00 0.00 4.35
2910 2972 9.020731 GGACAACTAAGAAAATTTCCCTTGATA 57.979 33.333 13.12 0.00 0.00 2.15
2911 2973 7.730332 AGGACAACTAAGAAAATTTCCCTTGAT 59.270 33.333 13.12 2.55 0.00 2.57
3074 3167 1.952296 ACAAGTTCTTTGCTGCCAGAG 59.048 47.619 0.00 0.00 40.59 3.35
3392 3485 6.033966 ACAAAGAACGATGGAAAAACACTTC 58.966 36.000 0.00 0.00 0.00 3.01
3460 3556 4.600576 TGCGTTCGTCTGCAGCCA 62.601 61.111 9.47 0.00 35.90 4.75
3535 3651 2.109126 GGCGGCAAGACAGTCATCC 61.109 63.158 3.07 0.00 0.00 3.51
3556 3672 1.382522 ACAGCGATGCACAAATAGGG 58.617 50.000 0.00 0.00 0.00 3.53
3571 3687 1.330306 CACGTTATGCAAGCAACAGC 58.670 50.000 0.00 0.00 0.00 4.40
3588 3704 2.608016 GGCTGCTTTTAGTTTCCTGCAC 60.608 50.000 0.00 0.00 0.00 4.57
3589 3705 1.613437 GGCTGCTTTTAGTTTCCTGCA 59.387 47.619 0.00 0.00 0.00 4.41
3618 3734 2.032924 CACGTTTCTGGGAAACTGGTTC 59.967 50.000 17.28 0.00 35.28 3.62
3619 3735 2.021457 CACGTTTCTGGGAAACTGGTT 58.979 47.619 17.28 0.00 0.00 3.67
3620 3736 1.210967 TCACGTTTCTGGGAAACTGGT 59.789 47.619 17.28 8.83 0.00 4.00
3621 3737 1.961793 TCACGTTTCTGGGAAACTGG 58.038 50.000 17.28 11.00 0.00 4.00
3622 3738 4.568152 ATTTCACGTTTCTGGGAAACTG 57.432 40.909 17.28 14.40 32.65 3.16
3623 3739 4.202111 CCAATTTCACGTTTCTGGGAAACT 60.202 41.667 17.28 5.78 32.65 2.66
3625 3741 3.491792 GCCAATTTCACGTTTCTGGGAAA 60.492 43.478 0.00 0.00 34.17 3.13
3643 3764 4.377635 GCGTTTGTTTAGTTATCGAGCCAA 60.378 41.667 0.00 0.00 0.00 4.52
3652 3773 7.566709 GTTTACTAGCTGCGTTTGTTTAGTTA 58.433 34.615 0.00 0.00 0.00 2.24
3687 3808 3.642755 CCAGTGTGGTTGTCGAGC 58.357 61.111 0.00 0.00 31.35 5.03
3700 3821 3.403038 GCAGTTATGAAGTCACACCAGT 58.597 45.455 0.00 0.00 0.00 4.00
3726 3851 3.175710 AGCACCAAGTTCCCGGGT 61.176 61.111 22.86 0.00 34.59 5.28
3727 3852 2.359975 GAGCACCAAGTTCCCGGG 60.360 66.667 16.85 16.85 0.00 5.73
3728 3853 1.376037 GAGAGCACCAAGTTCCCGG 60.376 63.158 0.00 0.00 0.00 5.73
3729 3854 1.738099 CGAGAGCACCAAGTTCCCG 60.738 63.158 0.00 0.00 0.00 5.14
3730 3855 1.376037 CCGAGAGCACCAAGTTCCC 60.376 63.158 0.00 0.00 0.00 3.97
3731 3856 1.376037 CCCGAGAGCACCAAGTTCC 60.376 63.158 0.00 0.00 0.00 3.62
3732 3857 0.606604 TACCCGAGAGCACCAAGTTC 59.393 55.000 0.00 0.00 0.00 3.01
3733 3858 0.320697 GTACCCGAGAGCACCAAGTT 59.679 55.000 0.00 0.00 0.00 2.66
3734 3859 1.542187 GGTACCCGAGAGCACCAAGT 61.542 60.000 0.00 0.00 0.00 3.16
3735 3860 1.218316 GGTACCCGAGAGCACCAAG 59.782 63.158 0.00 0.00 0.00 3.61
3736 3861 3.384348 GGTACCCGAGAGCACCAA 58.616 61.111 0.00 0.00 0.00 3.67
3749 3874 2.673833 GCATATAGAGTGTGCGGGTAC 58.326 52.381 0.00 0.00 35.18 3.34
3751 3876 3.989104 GCATATAGAGTGTGCGGGT 57.011 52.632 0.00 0.00 35.18 5.28
3756 3881 5.469373 TTCTTTTGCGCATATAGAGTGTG 57.531 39.130 12.75 0.00 0.00 3.82
3757 3882 6.683974 ATTTCTTTTGCGCATATAGAGTGT 57.316 33.333 12.75 2.03 0.00 3.55
3758 3883 8.338259 ACTAATTTCTTTTGCGCATATAGAGTG 58.662 33.333 12.75 6.56 0.00 3.51
3759 3884 8.438676 ACTAATTTCTTTTGCGCATATAGAGT 57.561 30.769 12.75 5.55 0.00 3.24
3765 3890 9.502145 CTGAATTACTAATTTCTTTTGCGCATA 57.498 29.630 12.75 2.60 0.00 3.14
3766 3891 8.243426 TCTGAATTACTAATTTCTTTTGCGCAT 58.757 29.630 12.75 0.00 0.00 4.73
3767 3892 7.589395 TCTGAATTACTAATTTCTTTTGCGCA 58.411 30.769 5.66 5.66 0.00 6.09
3768 3893 8.447787 TTCTGAATTACTAATTTCTTTTGCGC 57.552 30.769 0.00 0.00 0.00 6.09
3787 3912 9.956720 TTTGAAATTTTTGCAACTTTTTCTGAA 57.043 22.222 19.65 14.35 0.00 3.02
3820 3945 9.685276 ACAATACCTGATCATGTTTGATTCTAA 57.315 29.630 21.11 1.84 42.73 2.10
3822 3947 9.685276 TTACAATACCTGATCATGTTTGATTCT 57.315 29.630 21.11 5.95 42.73 2.40
3825 3950 8.777413 CGATTACAATACCTGATCATGTTTGAT 58.223 33.333 21.11 12.06 45.39 2.57
3826 3951 7.768582 ACGATTACAATACCTGATCATGTTTGA 59.231 33.333 21.11 4.56 36.00 2.69
3827 3952 7.919690 ACGATTACAATACCTGATCATGTTTG 58.080 34.615 9.01 13.93 0.00 2.93
3828 3953 9.778741 ATACGATTACAATACCTGATCATGTTT 57.221 29.630 9.01 0.00 0.00 2.83
3855 3980 9.685276 AGGAATCATTTCTTTTCCAAACTTTTT 57.315 25.926 3.96 0.00 41.15 1.94
3859 3984 9.933723 CAATAGGAATCATTTCTTTTCCAAACT 57.066 29.630 3.96 0.00 41.15 2.66
3860 3985 9.927668 TCAATAGGAATCATTTCTTTTCCAAAC 57.072 29.630 3.96 0.00 41.15 2.93
3861 3986 9.927668 GTCAATAGGAATCATTTCTTTTCCAAA 57.072 29.630 3.96 0.00 41.15 3.28
3862 3987 9.312904 AGTCAATAGGAATCATTTCTTTTCCAA 57.687 29.630 3.96 0.00 41.15 3.53
3863 3988 8.884124 AGTCAATAGGAATCATTTCTTTTCCA 57.116 30.769 3.96 0.00 41.15 3.53
3864 3989 9.794685 GAAGTCAATAGGAATCATTTCTTTTCC 57.205 33.333 0.00 0.00 39.38 3.13
3867 3992 8.964772 CCTGAAGTCAATAGGAATCATTTCTTT 58.035 33.333 0.00 0.00 33.33 2.52
3868 3993 7.559170 CCCTGAAGTCAATAGGAATCATTTCTT 59.441 37.037 0.00 0.00 33.33 2.52
3869 3994 7.059156 CCCTGAAGTCAATAGGAATCATTTCT 58.941 38.462 0.00 0.00 33.33 2.52
3870 3995 7.056635 TCCCTGAAGTCAATAGGAATCATTTC 58.943 38.462 0.00 0.00 33.33 2.17
3871 3996 6.973642 TCCCTGAAGTCAATAGGAATCATTT 58.026 36.000 0.00 0.00 33.33 2.32
3872 3997 6.581388 TCCCTGAAGTCAATAGGAATCATT 57.419 37.500 0.00 0.00 33.33 2.57
3873 3998 6.581388 TTCCCTGAAGTCAATAGGAATCAT 57.419 37.500 0.00 0.00 33.33 2.45
3874 3999 6.387192 TTTCCCTGAAGTCAATAGGAATCA 57.613 37.500 7.55 0.00 32.86 2.57
3875 4000 7.703058 TTTTTCCCTGAAGTCAATAGGAATC 57.297 36.000 7.55 0.00 32.86 2.52
3897 4022 3.685756 TCGAGACGGAAACTTGTGTTTTT 59.314 39.130 0.00 0.00 45.36 1.94
3898 4023 3.063045 GTCGAGACGGAAACTTGTGTTTT 59.937 43.478 0.00 0.00 45.36 2.43
3900 4025 2.199236 GTCGAGACGGAAACTTGTGTT 58.801 47.619 0.00 0.00 38.16 3.32
3901 4026 1.849097 GTCGAGACGGAAACTTGTGT 58.151 50.000 0.00 0.00 0.00 3.72
3913 4038 5.800941 ACATAGTTTTGAAGATCGTCGAGAC 59.199 40.000 10.44 10.44 0.00 3.36
3914 4039 5.950883 ACATAGTTTTGAAGATCGTCGAGA 58.049 37.500 0.00 0.00 0.00 4.04
3915 4040 6.308041 TCAACATAGTTTTGAAGATCGTCGAG 59.692 38.462 0.00 0.00 29.89 4.04
3916 4041 6.153756 TCAACATAGTTTTGAAGATCGTCGA 58.846 36.000 0.00 0.00 29.89 4.20
3917 4042 6.389622 TCAACATAGTTTTGAAGATCGTCG 57.610 37.500 4.15 0.00 29.89 5.12
3918 4043 9.855361 CATATCAACATAGTTTTGAAGATCGTC 57.145 33.333 1.20 1.20 36.57 4.20
3919 4044 9.383519 ACATATCAACATAGTTTTGAAGATCGT 57.616 29.630 0.00 0.00 36.57 3.73
3978 4103 3.570912 TCGGGAAAGTGGGAATTATCC 57.429 47.619 0.00 0.00 45.77 2.59
3979 4104 3.630769 GGTTCGGGAAAGTGGGAATTATC 59.369 47.826 0.00 0.00 0.00 1.75
3980 4105 3.628008 GGTTCGGGAAAGTGGGAATTAT 58.372 45.455 0.00 0.00 0.00 1.28
3981 4106 2.616001 CGGTTCGGGAAAGTGGGAATTA 60.616 50.000 0.00 0.00 0.00 1.40
3982 4107 1.884928 CGGTTCGGGAAAGTGGGAATT 60.885 52.381 0.00 0.00 0.00 2.17
3983 4108 0.322187 CGGTTCGGGAAAGTGGGAAT 60.322 55.000 0.00 0.00 0.00 3.01
3984 4109 1.071814 CGGTTCGGGAAAGTGGGAA 59.928 57.895 0.00 0.00 0.00 3.97
3985 4110 2.103339 GACGGTTCGGGAAAGTGGGA 62.103 60.000 0.00 0.00 0.00 4.37
3986 4111 1.670083 GACGGTTCGGGAAAGTGGG 60.670 63.158 0.00 0.00 0.00 4.61
3987 4112 2.025418 CGACGGTTCGGGAAAGTGG 61.025 63.158 0.00 0.00 41.89 4.00
3988 4113 3.545911 CGACGGTTCGGGAAAGTG 58.454 61.111 0.00 0.00 41.89 3.16
3997 4122 1.066136 GGAAACTGCTACGACGGTTC 58.934 55.000 0.00 0.00 38.19 3.62
3998 4123 0.320160 GGGAAACTGCTACGACGGTT 60.320 55.000 0.00 0.00 40.90 4.44
3999 4124 1.183676 AGGGAAACTGCTACGACGGT 61.184 55.000 0.00 0.00 0.00 4.83
4000 4125 0.736325 CAGGGAAACTGCTACGACGG 60.736 60.000 0.00 0.00 40.97 4.79
4001 4126 0.736325 CCAGGGAAACTGCTACGACG 60.736 60.000 0.00 0.00 46.14 5.12
4002 4127 0.606604 TCCAGGGAAACTGCTACGAC 59.393 55.000 0.00 0.00 46.14 4.34
4003 4128 0.895530 CTCCAGGGAAACTGCTACGA 59.104 55.000 0.00 0.00 46.14 3.43
4004 4129 0.741221 GCTCCAGGGAAACTGCTACG 60.741 60.000 0.00 0.00 46.14 3.51
4005 4130 0.324943 TGCTCCAGGGAAACTGCTAC 59.675 55.000 0.00 0.00 46.14 3.58
4006 4131 0.615331 CTGCTCCAGGGAAACTGCTA 59.385 55.000 0.00 0.00 46.14 3.49
4007 4132 1.130054 TCTGCTCCAGGGAAACTGCT 61.130 55.000 0.00 0.00 46.14 4.24
4008 4133 0.676151 CTCTGCTCCAGGGAAACTGC 60.676 60.000 0.00 0.00 46.14 4.40
4009 4134 3.739353 TAGCTCTGCTCCAGGGAAACTG 61.739 54.545 0.00 0.00 42.54 3.16
4010 4135 0.839853 AGCTCTGCTCCAGGGAAACT 60.840 55.000 0.00 0.00 32.95 2.66
4011 4136 0.905357 TAGCTCTGCTCCAGGGAAAC 59.095 55.000 0.00 0.00 40.44 2.78
4012 4137 0.905357 GTAGCTCTGCTCCAGGGAAA 59.095 55.000 0.00 0.00 40.44 3.13
4013 4138 0.252239 TGTAGCTCTGCTCCAGGGAA 60.252 55.000 0.00 0.00 40.44 3.97
4014 4139 0.685785 CTGTAGCTCTGCTCCAGGGA 60.686 60.000 4.54 0.00 38.64 4.20
4015 4140 0.975040 ACTGTAGCTCTGCTCCAGGG 60.975 60.000 14.76 0.00 44.96 4.45
4016 4141 1.680735 CTACTGTAGCTCTGCTCCAGG 59.319 57.143 14.76 0.00 44.96 4.45
4017 4142 1.066908 GCTACTGTAGCTCTGCTCCAG 59.933 57.143 27.91 9.96 45.89 3.86
4028 4153 1.874019 CACTGCGCGGCTACTGTAG 60.874 63.158 18.15 10.48 0.00 2.74
4029 4154 2.180769 CACTGCGCGGCTACTGTA 59.819 61.111 18.15 0.00 0.00 2.74
4030 4155 4.742201 CCACTGCGCGGCTACTGT 62.742 66.667 18.15 0.00 0.00 3.55
4033 4158 4.530857 ATCCCACTGCGCGGCTAC 62.531 66.667 18.15 0.00 0.00 3.58
4034 4159 3.733344 GAATCCCACTGCGCGGCTA 62.733 63.158 18.15 0.00 0.00 3.93
4037 4162 3.197790 CTGAATCCCACTGCGCGG 61.198 66.667 16.39 16.39 0.00 6.46
4038 4163 2.125552 TCTGAATCCCACTGCGCG 60.126 61.111 0.00 0.00 0.00 6.86
4039 4164 0.391661 TTCTCTGAATCCCACTGCGC 60.392 55.000 0.00 0.00 0.00 6.09
4040 4165 1.649664 CTTCTCTGAATCCCACTGCG 58.350 55.000 0.00 0.00 0.00 5.18
4041 4166 2.035530 CCTTCTCTGAATCCCACTGC 57.964 55.000 0.00 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.