Multiple sequence alignment - TraesCS7D01G259900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G259900 chr7D 100.000 3134 0 0 1 3134 235530938 235534071 0.000000e+00 5788.0
1 TraesCS7D01G259900 chr7D 94.357 762 34 3 2381 3134 98404600 98405360 0.000000e+00 1160.0
2 TraesCS7D01G259900 chr7D 89.286 56 1 3 13 64 506506213 506506267 7.260000e-07 65.8
3 TraesCS7D01G259900 chr7A 86.900 2084 133 56 369 2383 250675902 250677914 0.000000e+00 2207.0
4 TraesCS7D01G259900 chr7A 93.617 47 2 1 13 58 85592723 85592677 5.610000e-08 69.4
5 TraesCS7D01G259900 chr7B 95.179 809 34 1 1378 2181 211695987 211696795 0.000000e+00 1273.0
6 TraesCS7D01G259900 chr7B 84.144 1028 65 46 396 1384 211691346 211692314 0.000000e+00 905.0
7 TraesCS7D01G259900 chr7B 92.000 75 5 1 2249 2322 211696799 211696873 1.540000e-18 104.0
8 TraesCS7D01G259900 chr7B 89.552 67 3 3 5 67 683166906 683166840 7.200000e-12 82.4
9 TraesCS7D01G259900 chr7B 97.727 44 0 1 13 55 701637042 701637085 1.210000e-09 75.0
10 TraesCS7D01G259900 chr1D 95.257 759 28 2 2384 3134 423895044 423894286 0.000000e+00 1195.0
11 TraesCS7D01G259900 chr1D 94.226 762 36 2 2381 3134 421085065 421085826 0.000000e+00 1157.0
12 TraesCS7D01G259900 chr4D 95.125 759 29 2 2383 3133 504272029 504271271 0.000000e+00 1190.0
13 TraesCS7D01G259900 chr4D 93.848 764 34 5 2383 3134 466291064 466290302 0.000000e+00 1138.0
14 TraesCS7D01G259900 chr2A 94.125 766 37 2 2377 3134 68888650 68889415 0.000000e+00 1158.0
15 TraesCS7D01G259900 chr2A 97.727 44 0 1 13 55 43462495 43462452 1.210000e-09 75.0
16 TraesCS7D01G259900 chr1A 94.071 759 37 2 2384 3134 493294490 493295248 0.000000e+00 1146.0
17 TraesCS7D01G259900 chr2D 93.939 759 38 2 2384 3134 644390521 644389763 0.000000e+00 1140.0
18 TraesCS7D01G259900 chr6A 93.351 767 43 2 2376 3134 479910957 479911723 0.000000e+00 1127.0
19 TraesCS7D01G259900 chr6A 93.750 48 2 1 13 59 456781921 456781874 1.560000e-08 71.3
20 TraesCS7D01G259900 chr1B 100.000 43 0 0 13 55 343665305 343665347 2.590000e-11 80.5
21 TraesCS7D01G259900 chr1B 100.000 43 0 0 13 55 576029097 576029139 2.590000e-11 80.5
22 TraesCS7D01G259900 chr3D 90.385 52 3 2 13 62 588869706 588869757 2.020000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G259900 chr7D 235530938 235534071 3133 False 5788.000000 5788 100.000 1 3134 1 chr7D.!!$F2 3133
1 TraesCS7D01G259900 chr7D 98404600 98405360 760 False 1160.000000 1160 94.357 2381 3134 1 chr7D.!!$F1 753
2 TraesCS7D01G259900 chr7A 250675902 250677914 2012 False 2207.000000 2207 86.900 369 2383 1 chr7A.!!$F1 2014
3 TraesCS7D01G259900 chr7B 211691346 211696873 5527 False 760.666667 1273 90.441 396 2322 3 chr7B.!!$F2 1926
4 TraesCS7D01G259900 chr1D 423894286 423895044 758 True 1195.000000 1195 95.257 2384 3134 1 chr1D.!!$R1 750
5 TraesCS7D01G259900 chr1D 421085065 421085826 761 False 1157.000000 1157 94.226 2381 3134 1 chr1D.!!$F1 753
6 TraesCS7D01G259900 chr4D 504271271 504272029 758 True 1190.000000 1190 95.125 2383 3133 1 chr4D.!!$R2 750
7 TraesCS7D01G259900 chr4D 466290302 466291064 762 True 1138.000000 1138 93.848 2383 3134 1 chr4D.!!$R1 751
8 TraesCS7D01G259900 chr2A 68888650 68889415 765 False 1158.000000 1158 94.125 2377 3134 1 chr2A.!!$F1 757
9 TraesCS7D01G259900 chr1A 493294490 493295248 758 False 1146.000000 1146 94.071 2384 3134 1 chr1A.!!$F1 750
10 TraesCS7D01G259900 chr2D 644389763 644390521 758 True 1140.000000 1140 93.939 2384 3134 1 chr2D.!!$R1 750
11 TraesCS7D01G259900 chr6A 479910957 479911723 766 False 1127.000000 1127 93.351 2376 3134 1 chr6A.!!$F1 758

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
993 1045 0.110823 GCGTACGTGCCAACAAGAAG 60.111 55.0 17.9 0.0 0.0 2.85 F
1318 1379 0.179108 CCGGGACCTTAGCTTCTTCG 60.179 60.0 0.0 0.0 0.0 3.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1815 5555 0.390472 CGAGGGACCAGACTTTGAGC 60.390 60.0 0.0 0.0 0.0 4.26 R
2192 5952 0.461870 CCCACGGAGCGATTCATTCA 60.462 55.0 0.0 0.0 0.0 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.404923 TCCTTTTTGTCACCACGTGA 57.595 45.000 19.30 0.00 40.50 4.35
35 36 3.038788 ACGTGACACATGTGATAAGCA 57.961 42.857 31.94 16.96 31.87 3.91
36 37 3.398406 ACGTGACACATGTGATAAGCAA 58.602 40.909 31.94 6.32 31.87 3.91
37 38 4.002982 ACGTGACACATGTGATAAGCAAT 58.997 39.130 31.94 6.96 31.87 3.56
38 39 4.093408 ACGTGACACATGTGATAAGCAATC 59.907 41.667 31.94 16.13 31.87 2.67
39 40 4.494690 CGTGACACATGTGATAAGCAATCC 60.495 45.833 31.94 9.33 33.22 3.01
40 41 4.395854 GTGACACATGTGATAAGCAATCCA 59.604 41.667 31.94 10.04 33.22 3.41
41 42 5.008980 TGACACATGTGATAAGCAATCCAA 58.991 37.500 31.94 0.00 33.22 3.53
42 43 5.476254 TGACACATGTGATAAGCAATCCAAA 59.524 36.000 31.94 0.00 33.22 3.28
43 44 5.713025 ACACATGTGATAAGCAATCCAAAC 58.287 37.500 31.94 0.00 33.22 2.93
44 45 5.243507 ACACATGTGATAAGCAATCCAAACA 59.756 36.000 31.94 0.00 33.22 2.83
45 46 6.157904 CACATGTGATAAGCAATCCAAACAA 58.842 36.000 21.64 0.00 33.22 2.83
46 47 6.814644 CACATGTGATAAGCAATCCAAACAAT 59.185 34.615 21.64 0.00 33.22 2.71
47 48 7.332430 CACATGTGATAAGCAATCCAAACAATT 59.668 33.333 21.64 0.00 33.22 2.32
48 49 8.530311 ACATGTGATAAGCAATCCAAACAATTA 58.470 29.630 0.00 0.00 33.22 1.40
49 50 9.368674 CATGTGATAAGCAATCCAAACAATTAA 57.631 29.630 0.00 0.00 33.22 1.40
50 51 9.941325 ATGTGATAAGCAATCCAAACAATTAAA 57.059 25.926 0.00 0.00 33.22 1.52
51 52 9.770097 TGTGATAAGCAATCCAAACAATTAAAA 57.230 25.926 0.00 0.00 33.22 1.52
99 100 6.377327 TTTTTCAATCTTCTGAAGCTCGTT 57.623 33.333 12.54 2.64 36.69 3.85
100 101 7.490962 TTTTTCAATCTTCTGAAGCTCGTTA 57.509 32.000 12.54 0.00 36.69 3.18
101 102 7.672983 TTTTCAATCTTCTGAAGCTCGTTAT 57.327 32.000 12.54 0.00 36.69 1.89
102 103 8.771920 TTTTCAATCTTCTGAAGCTCGTTATA 57.228 30.769 12.54 0.00 36.69 0.98
103 104 8.948631 TTTCAATCTTCTGAAGCTCGTTATAT 57.051 30.769 12.54 0.00 36.69 0.86
104 105 8.948631 TTCAATCTTCTGAAGCTCGTTATATT 57.051 30.769 12.54 2.26 31.67 1.28
108 109 8.819643 ATCTTCTGAAGCTCGTTATATTAACC 57.180 34.615 12.54 0.00 0.00 2.85
109 110 7.208080 TCTTCTGAAGCTCGTTATATTAACCC 58.792 38.462 12.54 0.00 0.00 4.11
110 111 6.474140 TCTGAAGCTCGTTATATTAACCCA 57.526 37.500 0.00 0.00 0.00 4.51
111 112 7.062749 TCTGAAGCTCGTTATATTAACCCAT 57.937 36.000 0.00 0.00 0.00 4.00
112 113 7.506114 TCTGAAGCTCGTTATATTAACCCATT 58.494 34.615 0.00 0.00 0.00 3.16
113 114 7.990886 TCTGAAGCTCGTTATATTAACCCATTT 59.009 33.333 0.00 0.00 0.00 2.32
114 115 7.925993 TGAAGCTCGTTATATTAACCCATTTG 58.074 34.615 0.00 0.00 0.00 2.32
115 116 6.313744 AGCTCGTTATATTAACCCATTTGC 57.686 37.500 0.00 0.00 0.00 3.68
116 117 6.062095 AGCTCGTTATATTAACCCATTTGCT 58.938 36.000 0.00 0.00 0.00 3.91
117 118 6.546034 AGCTCGTTATATTAACCCATTTGCTT 59.454 34.615 0.00 0.00 0.00 3.91
118 119 7.717875 AGCTCGTTATATTAACCCATTTGCTTA 59.282 33.333 0.00 0.00 0.00 3.09
119 120 8.512138 GCTCGTTATATTAACCCATTTGCTTAT 58.488 33.333 0.00 0.00 0.00 1.73
129 130 9.868277 TTAACCCATTTGCTTATTGATAAGTTG 57.132 29.630 11.29 5.79 41.34 3.16
130 131 6.877236 ACCCATTTGCTTATTGATAAGTTGG 58.123 36.000 11.29 11.88 41.34 3.77
131 132 5.754890 CCCATTTGCTTATTGATAAGTTGGC 59.245 40.000 11.29 0.71 41.34 4.52
132 133 5.754890 CCATTTGCTTATTGATAAGTTGGCC 59.245 40.000 11.29 0.00 41.34 5.36
133 134 4.630894 TTGCTTATTGATAAGTTGGCCG 57.369 40.909 11.29 0.00 41.34 6.13
134 135 3.879998 TGCTTATTGATAAGTTGGCCGA 58.120 40.909 11.29 0.00 41.34 5.54
135 136 3.876914 TGCTTATTGATAAGTTGGCCGAG 59.123 43.478 11.29 0.00 41.34 4.63
136 137 3.877508 GCTTATTGATAAGTTGGCCGAGT 59.122 43.478 11.29 0.00 41.34 4.18
137 138 4.335594 GCTTATTGATAAGTTGGCCGAGTT 59.664 41.667 17.44 17.44 41.34 3.01
138 139 5.163652 GCTTATTGATAAGTTGGCCGAGTTT 60.164 40.000 18.49 6.64 41.34 2.66
139 140 6.625081 GCTTATTGATAAGTTGGCCGAGTTTT 60.625 38.462 18.49 10.75 41.34 2.43
140 141 4.497473 TTGATAAGTTGGCCGAGTTTTG 57.503 40.909 18.49 0.00 0.00 2.44
141 142 3.745799 TGATAAGTTGGCCGAGTTTTGA 58.254 40.909 18.49 2.12 0.00 2.69
142 143 3.500680 TGATAAGTTGGCCGAGTTTTGAC 59.499 43.478 18.49 8.29 0.00 3.18
143 144 1.757682 AAGTTGGCCGAGTTTTGACA 58.242 45.000 7.30 0.00 0.00 3.58
144 145 1.981256 AGTTGGCCGAGTTTTGACAT 58.019 45.000 0.00 0.00 0.00 3.06
145 146 3.134574 AGTTGGCCGAGTTTTGACATA 57.865 42.857 0.00 0.00 0.00 2.29
146 147 2.812011 AGTTGGCCGAGTTTTGACATAC 59.188 45.455 0.00 0.00 0.00 2.39
147 148 2.550606 GTTGGCCGAGTTTTGACATACA 59.449 45.455 0.00 0.00 0.00 2.29
148 149 2.147958 TGGCCGAGTTTTGACATACAC 58.852 47.619 0.00 0.00 0.00 2.90
149 150 2.224426 TGGCCGAGTTTTGACATACACT 60.224 45.455 0.00 0.00 0.00 3.55
150 151 3.007074 TGGCCGAGTTTTGACATACACTA 59.993 43.478 0.00 0.00 0.00 2.74
151 152 4.189231 GGCCGAGTTTTGACATACACTAT 58.811 43.478 0.00 0.00 0.00 2.12
152 153 5.105269 TGGCCGAGTTTTGACATACACTATA 60.105 40.000 0.00 0.00 0.00 1.31
153 154 5.233689 GGCCGAGTTTTGACATACACTATAC 59.766 44.000 0.00 0.00 0.00 1.47
154 155 5.233689 GCCGAGTTTTGACATACACTATACC 59.766 44.000 0.00 0.00 0.00 2.73
155 156 5.751990 CCGAGTTTTGACATACACTATACCC 59.248 44.000 0.00 0.00 0.00 3.69
156 157 6.334989 CGAGTTTTGACATACACTATACCCA 58.665 40.000 0.00 0.00 0.00 4.51
157 158 6.255020 CGAGTTTTGACATACACTATACCCAC 59.745 42.308 0.00 0.00 0.00 4.61
158 159 6.103997 AGTTTTGACATACACTATACCCACG 58.896 40.000 0.00 0.00 0.00 4.94
159 160 5.664294 TTTGACATACACTATACCCACGT 57.336 39.130 0.00 0.00 0.00 4.49
160 161 6.772360 TTTGACATACACTATACCCACGTA 57.228 37.500 0.00 0.00 0.00 3.57
161 162 6.772360 TTGACATACACTATACCCACGTAA 57.228 37.500 0.00 0.00 0.00 3.18
162 163 6.135290 TGACATACACTATACCCACGTAAC 57.865 41.667 0.00 0.00 0.00 2.50
163 164 5.887598 TGACATACACTATACCCACGTAACT 59.112 40.000 0.00 0.00 0.00 2.24
164 165 6.377996 TGACATACACTATACCCACGTAACTT 59.622 38.462 0.00 0.00 0.00 2.66
165 166 6.799512 ACATACACTATACCCACGTAACTTC 58.200 40.000 0.00 0.00 0.00 3.01
166 167 6.604795 ACATACACTATACCCACGTAACTTCT 59.395 38.462 0.00 0.00 0.00 2.85
167 168 5.573337 ACACTATACCCACGTAACTTCTC 57.427 43.478 0.00 0.00 0.00 2.87
168 169 4.400567 ACACTATACCCACGTAACTTCTCC 59.599 45.833 0.00 0.00 0.00 3.71
169 170 4.400251 CACTATACCCACGTAACTTCTCCA 59.600 45.833 0.00 0.00 0.00 3.86
170 171 5.018809 ACTATACCCACGTAACTTCTCCAA 58.981 41.667 0.00 0.00 0.00 3.53
171 172 2.538512 ACCCACGTAACTTCTCCAAC 57.461 50.000 0.00 0.00 0.00 3.77
172 173 2.044758 ACCCACGTAACTTCTCCAACT 58.955 47.619 0.00 0.00 0.00 3.16
173 174 2.036862 ACCCACGTAACTTCTCCAACTC 59.963 50.000 0.00 0.00 0.00 3.01
174 175 2.036733 CCCACGTAACTTCTCCAACTCA 59.963 50.000 0.00 0.00 0.00 3.41
175 176 3.493699 CCCACGTAACTTCTCCAACTCAA 60.494 47.826 0.00 0.00 0.00 3.02
176 177 4.315803 CCACGTAACTTCTCCAACTCAAT 58.684 43.478 0.00 0.00 0.00 2.57
177 178 4.152402 CCACGTAACTTCTCCAACTCAATG 59.848 45.833 0.00 0.00 0.00 2.82
178 179 4.152402 CACGTAACTTCTCCAACTCAATGG 59.848 45.833 0.00 0.00 42.12 3.16
179 180 4.202326 ACGTAACTTCTCCAACTCAATGGT 60.202 41.667 0.00 0.00 41.46 3.55
180 181 4.755123 CGTAACTTCTCCAACTCAATGGTT 59.245 41.667 0.00 0.00 41.46 3.67
181 182 5.238650 CGTAACTTCTCCAACTCAATGGTTT 59.761 40.000 0.00 0.00 41.46 3.27
182 183 6.238648 CGTAACTTCTCCAACTCAATGGTTTT 60.239 38.462 0.00 0.00 41.46 2.43
183 184 6.544928 AACTTCTCCAACTCAATGGTTTTT 57.455 33.333 0.00 0.00 41.46 1.94
184 185 7.654022 AACTTCTCCAACTCAATGGTTTTTA 57.346 32.000 0.00 0.00 41.46 1.52
185 186 7.654022 ACTTCTCCAACTCAATGGTTTTTAA 57.346 32.000 0.00 0.00 41.46 1.52
186 187 8.250143 ACTTCTCCAACTCAATGGTTTTTAAT 57.750 30.769 0.00 0.00 41.46 1.40
187 188 8.360390 ACTTCTCCAACTCAATGGTTTTTAATC 58.640 33.333 0.00 0.00 41.46 1.75
188 189 8.477419 TTCTCCAACTCAATGGTTTTTAATCT 57.523 30.769 0.00 0.00 41.46 2.40
189 190 8.110860 TCTCCAACTCAATGGTTTTTAATCTC 57.889 34.615 0.00 0.00 41.46 2.75
190 191 7.176690 TCTCCAACTCAATGGTTTTTAATCTCC 59.823 37.037 0.00 0.00 41.46 3.71
191 192 7.010160 TCCAACTCAATGGTTTTTAATCTCCT 58.990 34.615 0.00 0.00 41.46 3.69
192 193 7.176690 TCCAACTCAATGGTTTTTAATCTCCTC 59.823 37.037 0.00 0.00 41.46 3.71
193 194 7.315890 CAACTCAATGGTTTTTAATCTCCTCC 58.684 38.462 0.00 0.00 0.00 4.30
194 195 5.952347 ACTCAATGGTTTTTAATCTCCTCCC 59.048 40.000 0.00 0.00 0.00 4.30
195 196 5.898120 TCAATGGTTTTTAATCTCCTCCCA 58.102 37.500 0.00 0.00 0.00 4.37
196 197 5.714806 TCAATGGTTTTTAATCTCCTCCCAC 59.285 40.000 0.00 0.00 0.00 4.61
197 198 5.536497 ATGGTTTTTAATCTCCTCCCACT 57.464 39.130 0.00 0.00 0.00 4.00
198 199 5.333566 TGGTTTTTAATCTCCTCCCACTT 57.666 39.130 0.00 0.00 0.00 3.16
199 200 6.457159 TGGTTTTTAATCTCCTCCCACTTA 57.543 37.500 0.00 0.00 0.00 2.24
200 201 6.854578 TGGTTTTTAATCTCCTCCCACTTAA 58.145 36.000 0.00 0.00 0.00 1.85
201 202 6.717997 TGGTTTTTAATCTCCTCCCACTTAAC 59.282 38.462 0.00 0.00 0.00 2.01
202 203 6.717997 GGTTTTTAATCTCCTCCCACTTAACA 59.282 38.462 0.00 0.00 0.00 2.41
203 204 7.309012 GGTTTTTAATCTCCTCCCACTTAACAC 60.309 40.741 0.00 0.00 0.00 3.32
204 205 3.611766 AATCTCCTCCCACTTAACACG 57.388 47.619 0.00 0.00 0.00 4.49
205 206 0.606604 TCTCCTCCCACTTAACACGC 59.393 55.000 0.00 0.00 0.00 5.34
206 207 0.320374 CTCCTCCCACTTAACACGCA 59.680 55.000 0.00 0.00 0.00 5.24
207 208 0.981183 TCCTCCCACTTAACACGCAT 59.019 50.000 0.00 0.00 0.00 4.73
208 209 1.066430 TCCTCCCACTTAACACGCATC 60.066 52.381 0.00 0.00 0.00 3.91
209 210 0.999406 CTCCCACTTAACACGCATCG 59.001 55.000 0.00 0.00 0.00 3.84
210 211 0.319083 TCCCACTTAACACGCATCGT 59.681 50.000 0.00 0.00 42.36 3.73
211 212 0.719465 CCCACTTAACACGCATCGTC 59.281 55.000 0.00 0.00 38.32 4.20
212 213 0.365523 CCACTTAACACGCATCGTCG 59.634 55.000 0.00 0.00 38.32 5.12
213 214 0.365523 CACTTAACACGCATCGTCGG 59.634 55.000 0.00 0.00 38.32 4.79
214 215 1.343821 CTTAACACGCATCGTCGGC 59.656 57.895 0.00 0.00 38.32 5.54
215 216 1.348538 CTTAACACGCATCGTCGGCA 61.349 55.000 0.00 0.00 38.32 5.69
216 217 0.944788 TTAACACGCATCGTCGGCAA 60.945 50.000 0.00 0.00 38.32 4.52
217 218 0.738063 TAACACGCATCGTCGGCAAT 60.738 50.000 0.00 0.00 38.32 3.56
218 219 1.966493 AACACGCATCGTCGGCAATC 61.966 55.000 0.00 0.00 38.32 2.67
219 220 2.167219 CACGCATCGTCGGCAATCT 61.167 57.895 0.00 0.00 38.32 2.40
220 221 1.447838 ACGCATCGTCGGCAATCTT 60.448 52.632 0.00 0.00 33.69 2.40
221 222 1.011904 CGCATCGTCGGCAATCTTG 60.012 57.895 0.00 0.00 0.00 3.02
222 223 1.420641 CGCATCGTCGGCAATCTTGA 61.421 55.000 0.00 0.00 0.00 3.02
223 224 0.726827 GCATCGTCGGCAATCTTGAA 59.273 50.000 0.00 0.00 0.00 2.69
224 225 1.130373 GCATCGTCGGCAATCTTGAAA 59.870 47.619 0.00 0.00 0.00 2.69
225 226 2.223340 GCATCGTCGGCAATCTTGAAAT 60.223 45.455 0.00 0.00 0.00 2.17
226 227 3.002246 GCATCGTCGGCAATCTTGAAATA 59.998 43.478 0.00 0.00 0.00 1.40
227 228 4.495679 GCATCGTCGGCAATCTTGAAATAA 60.496 41.667 0.00 0.00 0.00 1.40
228 229 5.568482 CATCGTCGGCAATCTTGAAATAAA 58.432 37.500 0.00 0.00 0.00 1.40
229 230 5.811399 TCGTCGGCAATCTTGAAATAAAT 57.189 34.783 0.00 0.00 0.00 1.40
230 231 6.189677 TCGTCGGCAATCTTGAAATAAATT 57.810 33.333 0.00 0.00 0.00 1.82
231 232 6.255215 TCGTCGGCAATCTTGAAATAAATTC 58.745 36.000 0.00 0.00 38.60 2.17
232 233 6.027131 CGTCGGCAATCTTGAAATAAATTCA 58.973 36.000 0.00 0.00 46.22 2.57
277 278 0.908198 AGGACTTGACCCTGATGAGC 59.092 55.000 0.00 0.00 31.66 4.26
278 279 0.908198 GGACTTGACCCTGATGAGCT 59.092 55.000 0.00 0.00 0.00 4.09
279 280 1.406614 GGACTTGACCCTGATGAGCTG 60.407 57.143 0.00 0.00 0.00 4.24
280 281 0.617413 ACTTGACCCTGATGAGCTGG 59.383 55.000 0.00 0.00 35.50 4.85
306 307 9.710818 GGATACCACTATCCTACTAATTATCCA 57.289 37.037 0.00 0.00 43.87 3.41
323 324 4.900635 ATCCAATTACAGGTTGATTCGC 57.099 40.909 0.00 0.00 0.00 4.70
324 325 3.950397 TCCAATTACAGGTTGATTCGCT 58.050 40.909 0.00 0.00 0.00 4.93
325 326 3.938963 TCCAATTACAGGTTGATTCGCTC 59.061 43.478 0.00 0.00 0.00 5.03
326 327 3.065371 CCAATTACAGGTTGATTCGCTCC 59.935 47.826 0.00 0.00 0.00 4.70
327 328 2.396590 TTACAGGTTGATTCGCTCCC 57.603 50.000 0.00 0.00 0.00 4.30
328 329 1.568504 TACAGGTTGATTCGCTCCCT 58.431 50.000 0.00 0.00 0.00 4.20
329 330 0.693049 ACAGGTTGATTCGCTCCCTT 59.307 50.000 0.00 0.00 0.00 3.95
330 331 1.906574 ACAGGTTGATTCGCTCCCTTA 59.093 47.619 0.00 0.00 0.00 2.69
331 332 2.280628 CAGGTTGATTCGCTCCCTTAC 58.719 52.381 0.00 0.00 0.00 2.34
332 333 2.093447 CAGGTTGATTCGCTCCCTTACT 60.093 50.000 0.00 0.00 0.00 2.24
333 334 2.168728 AGGTTGATTCGCTCCCTTACTC 59.831 50.000 0.00 0.00 0.00 2.59
334 335 2.093658 GGTTGATTCGCTCCCTTACTCA 60.094 50.000 0.00 0.00 0.00 3.41
335 336 3.596214 GTTGATTCGCTCCCTTACTCAA 58.404 45.455 0.00 0.00 0.00 3.02
336 337 4.192317 GTTGATTCGCTCCCTTACTCAAT 58.808 43.478 0.00 0.00 0.00 2.57
337 338 3.797039 TGATTCGCTCCCTTACTCAATG 58.203 45.455 0.00 0.00 0.00 2.82
338 339 3.197766 TGATTCGCTCCCTTACTCAATGT 59.802 43.478 0.00 0.00 0.00 2.71
339 340 3.695830 TTCGCTCCCTTACTCAATGTT 57.304 42.857 0.00 0.00 0.00 2.71
340 341 2.972625 TCGCTCCCTTACTCAATGTTG 58.027 47.619 0.00 0.00 0.00 3.33
341 342 2.565391 TCGCTCCCTTACTCAATGTTGA 59.435 45.455 0.00 0.00 35.57 3.18
342 343 3.197766 TCGCTCCCTTACTCAATGTTGAT 59.802 43.478 0.00 0.00 36.46 2.57
343 344 4.404394 TCGCTCCCTTACTCAATGTTGATA 59.596 41.667 0.00 0.00 36.46 2.15
344 345 5.070446 TCGCTCCCTTACTCAATGTTGATAT 59.930 40.000 0.00 0.00 36.46 1.63
345 346 5.178252 CGCTCCCTTACTCAATGTTGATATG 59.822 44.000 0.00 0.00 36.46 1.78
346 347 5.049129 GCTCCCTTACTCAATGTTGATATGC 60.049 44.000 0.00 0.00 36.46 3.14
347 348 5.056480 TCCCTTACTCAATGTTGATATGCG 58.944 41.667 0.00 0.00 36.46 4.73
348 349 5.056480 CCCTTACTCAATGTTGATATGCGA 58.944 41.667 0.00 0.00 36.46 5.10
349 350 5.527214 CCCTTACTCAATGTTGATATGCGAA 59.473 40.000 0.00 0.00 36.46 4.70
350 351 6.293081 CCCTTACTCAATGTTGATATGCGAAG 60.293 42.308 0.00 0.00 36.46 3.79
351 352 6.479990 CCTTACTCAATGTTGATATGCGAAGA 59.520 38.462 0.00 0.00 36.46 2.87
352 353 7.011389 CCTTACTCAATGTTGATATGCGAAGAA 59.989 37.037 0.00 0.00 36.46 2.52
353 354 6.932356 ACTCAATGTTGATATGCGAAGAAT 57.068 33.333 0.00 0.00 36.46 2.40
354 355 6.722301 ACTCAATGTTGATATGCGAAGAATG 58.278 36.000 0.00 0.00 36.46 2.67
355 356 6.539826 ACTCAATGTTGATATGCGAAGAATGA 59.460 34.615 0.00 0.00 36.46 2.57
356 357 6.718388 TCAATGTTGATATGCGAAGAATGAC 58.282 36.000 0.00 0.00 31.01 3.06
357 358 5.679734 ATGTTGATATGCGAAGAATGACC 57.320 39.130 0.00 0.00 0.00 4.02
358 359 4.512484 TGTTGATATGCGAAGAATGACCA 58.488 39.130 0.00 0.00 0.00 4.02
359 360 4.940654 TGTTGATATGCGAAGAATGACCAA 59.059 37.500 0.00 0.00 0.00 3.67
360 361 5.414144 TGTTGATATGCGAAGAATGACCAAA 59.586 36.000 0.00 0.00 0.00 3.28
361 362 5.484173 TGATATGCGAAGAATGACCAAAC 57.516 39.130 0.00 0.00 0.00 2.93
362 363 2.900122 ATGCGAAGAATGACCAAACG 57.100 45.000 0.00 0.00 0.00 3.60
363 364 0.871722 TGCGAAGAATGACCAAACGG 59.128 50.000 0.00 0.00 0.00 4.44
364 365 1.153353 GCGAAGAATGACCAAACGGA 58.847 50.000 0.00 0.00 0.00 4.69
365 366 1.533731 GCGAAGAATGACCAAACGGAA 59.466 47.619 0.00 0.00 0.00 4.30
366 367 2.031508 GCGAAGAATGACCAAACGGAAA 60.032 45.455 0.00 0.00 0.00 3.13
367 368 3.365969 GCGAAGAATGACCAAACGGAAAT 60.366 43.478 0.00 0.00 0.00 2.17
383 384 2.050691 GAAATGCGTCATTTGCGTGTT 58.949 42.857 18.26 0.00 43.05 3.32
396 397 0.603569 GCGTGTTGAGGAGAAGGAGA 59.396 55.000 0.00 0.00 0.00 3.71
397 398 1.670380 GCGTGTTGAGGAGAAGGAGAC 60.670 57.143 0.00 0.00 0.00 3.36
441 452 3.726517 GCATGTGAAGTGCGGCGT 61.727 61.111 9.37 0.00 32.29 5.68
526 537 2.018544 CACCGGAAAACGTTGCTCA 58.981 52.632 9.46 0.00 42.24 4.26
527 538 0.591170 CACCGGAAAACGTTGCTCAT 59.409 50.000 9.46 0.00 42.24 2.90
529 540 2.418628 CACCGGAAAACGTTGCTCATAT 59.581 45.455 9.46 0.00 42.24 1.78
530 541 2.676342 ACCGGAAAACGTTGCTCATATC 59.324 45.455 9.46 0.00 42.24 1.63
535 546 1.151777 AACGTTGCTCATATCGCGGG 61.152 55.000 6.13 0.00 0.00 6.13
574 585 3.690280 TGATGCGGTGTCGGCTCA 61.690 61.111 0.00 0.00 36.79 4.26
575 586 3.188786 GATGCGGTGTCGGCTCAC 61.189 66.667 0.00 1.94 37.57 3.51
592 603 0.242825 CACGGCTACGAGAGAAACCA 59.757 55.000 0.00 0.00 44.60 3.67
605 616 4.561105 AGAGAAACCAGAACGAATCACTC 58.439 43.478 0.00 0.00 0.00 3.51
620 631 2.125350 CTCGAGCCCAAGTCCAGC 60.125 66.667 0.00 0.00 0.00 4.85
643 666 0.456995 GTGTCACGACCTAGCTGAGC 60.457 60.000 0.00 0.00 0.00 4.26
646 669 2.055042 CACGACCTAGCTGAGCCCT 61.055 63.158 0.00 0.00 0.00 5.19
648 671 2.494530 CGACCTAGCTGAGCCCTCC 61.495 68.421 0.00 0.00 0.00 4.30
649 672 2.041405 ACCTAGCTGAGCCCTCCC 60.041 66.667 0.00 0.00 0.00 4.30
650 673 2.285180 CCTAGCTGAGCCCTCCCT 59.715 66.667 0.00 0.00 0.00 4.20
651 674 1.836604 CCTAGCTGAGCCCTCCCTC 60.837 68.421 0.00 0.00 0.00 4.30
652 675 2.123683 TAGCTGAGCCCTCCCTCG 60.124 66.667 0.00 0.00 34.56 4.63
653 676 2.632602 CTAGCTGAGCCCTCCCTCGA 62.633 65.000 0.00 0.00 34.56 4.04
655 678 3.522731 CTGAGCCCTCCCTCGACG 61.523 72.222 0.00 0.00 34.56 5.12
658 681 4.698625 AGCCCTCCCTCGACGGTT 62.699 66.667 0.15 0.00 0.00 4.44
659 682 2.757099 GCCCTCCCTCGACGGTTA 60.757 66.667 0.15 0.00 0.00 2.85
660 683 2.132352 GCCCTCCCTCGACGGTTAT 61.132 63.158 0.15 0.00 0.00 1.89
661 684 2.039509 CCCTCCCTCGACGGTTATC 58.960 63.158 0.15 0.00 0.00 1.75
662 685 0.754217 CCCTCCCTCGACGGTTATCA 60.754 60.000 0.15 0.00 0.00 2.15
663 686 0.384669 CCTCCCTCGACGGTTATCAC 59.615 60.000 0.15 0.00 0.00 3.06
664 687 1.390565 CTCCCTCGACGGTTATCACT 58.609 55.000 0.15 0.00 0.00 3.41
665 688 1.749634 CTCCCTCGACGGTTATCACTT 59.250 52.381 0.15 0.00 0.00 3.16
673 696 3.795101 CGACGGTTATCACTTATCACCAC 59.205 47.826 0.00 0.00 32.14 4.16
674 697 4.675933 CGACGGTTATCACTTATCACCACA 60.676 45.833 0.00 0.00 32.14 4.17
679 702 5.234329 GGTTATCACTTATCACCACACATCG 59.766 44.000 0.00 0.00 32.80 3.84
693 716 1.448540 CATCGCGCAGGTTCTCCTT 60.449 57.895 8.75 0.00 43.07 3.36
741 777 1.819208 CGCGGGCTCCAATCATTCA 60.819 57.895 0.00 0.00 0.00 2.57
742 778 1.779025 CGCGGGCTCCAATCATTCAG 61.779 60.000 0.00 0.00 0.00 3.02
743 779 1.450531 GCGGGCTCCAATCATTCAGG 61.451 60.000 0.00 0.00 0.00 3.86
744 780 1.450531 CGGGCTCCAATCATTCAGGC 61.451 60.000 0.00 0.00 0.00 4.85
745 781 0.396139 GGGCTCCAATCATTCAGGCA 60.396 55.000 2.65 0.00 33.15 4.75
746 782 1.030457 GGCTCCAATCATTCAGGCAG 58.970 55.000 0.00 0.00 0.00 4.85
747 783 1.684248 GGCTCCAATCATTCAGGCAGT 60.684 52.381 0.00 0.00 0.00 4.40
758 794 5.869579 TCATTCAGGCAGTATTTCTATCCC 58.130 41.667 0.00 0.00 0.00 3.85
759 795 5.608437 TCATTCAGGCAGTATTTCTATCCCT 59.392 40.000 0.00 0.00 0.00 4.20
760 796 4.963318 TCAGGCAGTATTTCTATCCCTG 57.037 45.455 0.00 0.00 0.00 4.45
761 797 3.071602 TCAGGCAGTATTTCTATCCCTGC 59.928 47.826 0.00 0.00 45.93 4.85
783 819 3.066190 CGACCAGCGGACCAGGTA 61.066 66.667 0.00 0.00 35.36 3.08
784 820 2.577593 GACCAGCGGACCAGGTAC 59.422 66.667 0.00 0.00 35.36 3.34
785 821 3.001406 ACCAGCGGACCAGGTACC 61.001 66.667 2.73 2.73 32.92 3.34
786 822 3.000819 CCAGCGGACCAGGTACCA 61.001 66.667 15.94 0.00 0.00 3.25
787 823 2.264794 CAGCGGACCAGGTACCAC 59.735 66.667 15.94 2.31 0.00 4.16
788 824 3.001406 AGCGGACCAGGTACCACC 61.001 66.667 15.94 10.62 38.99 4.61
789 825 4.091939 GCGGACCAGGTACCACCC 62.092 72.222 15.94 8.15 39.75 4.61
790 826 3.766691 CGGACCAGGTACCACCCG 61.767 72.222 15.94 16.04 39.75 5.28
793 829 2.605601 ACCAGGTACCACCCGACC 60.606 66.667 15.94 0.00 39.75 4.79
801 837 0.466189 TACCACCCGACCCGAGTATC 60.466 60.000 0.00 0.00 0.00 2.24
810 846 2.317040 GACCCGAGTATCCTCATCCAA 58.683 52.381 0.00 0.00 37.59 3.53
817 853 4.022242 CGAGTATCCTCATCCAACCGTATT 60.022 45.833 0.00 0.00 37.59 1.89
818 854 5.182570 CGAGTATCCTCATCCAACCGTATTA 59.817 44.000 0.00 0.00 37.59 0.98
819 855 6.342338 AGTATCCTCATCCAACCGTATTAC 57.658 41.667 0.00 0.00 0.00 1.89
820 856 5.836898 AGTATCCTCATCCAACCGTATTACA 59.163 40.000 0.00 0.00 0.00 2.41
823 859 4.119862 CCTCATCCAACCGTATTACACAG 58.880 47.826 0.00 0.00 0.00 3.66
831 867 5.175859 CAACCGTATTACACAGTTGGAGAT 58.824 41.667 11.02 0.00 40.44 2.75
843 879 7.445945 ACACAGTTGGAGATCTATTTATAGCC 58.554 38.462 0.00 0.00 0.00 3.93
844 880 6.876257 CACAGTTGGAGATCTATTTATAGCCC 59.124 42.308 0.00 0.00 0.00 5.19
845 881 6.558775 ACAGTTGGAGATCTATTTATAGCCCA 59.441 38.462 0.00 0.00 0.00 5.36
846 882 7.238514 ACAGTTGGAGATCTATTTATAGCCCAT 59.761 37.037 0.00 0.00 0.00 4.00
868 904 6.296894 CCATCCATCCCTTCTAATCTTAGCAT 60.297 42.308 0.00 0.00 0.00 3.79
869 905 6.770286 TCCATCCCTTCTAATCTTAGCATT 57.230 37.500 0.00 0.00 0.00 3.56
870 906 7.872061 TCCATCCCTTCTAATCTTAGCATTA 57.128 36.000 0.00 0.00 0.00 1.90
871 907 7.680730 TCCATCCCTTCTAATCTTAGCATTAC 58.319 38.462 0.00 0.00 0.00 1.89
872 908 7.292356 TCCATCCCTTCTAATCTTAGCATTACA 59.708 37.037 0.00 0.00 0.00 2.41
873 909 8.105829 CCATCCCTTCTAATCTTAGCATTACAT 58.894 37.037 0.00 0.00 0.00 2.29
893 929 8.902540 TTACATTACATTCCATCTACATCCAC 57.097 34.615 0.00 0.00 0.00 4.02
898 934 2.153034 TCCATCTACATCCACCGTCA 57.847 50.000 0.00 0.00 0.00 4.35
903 943 3.801114 TCTACATCCACCGTCATCTTG 57.199 47.619 0.00 0.00 0.00 3.02
911 951 3.138304 CCACCGTCATCTTGTCTGAAAA 58.862 45.455 0.00 0.00 0.00 2.29
915 955 4.152402 ACCGTCATCTTGTCTGAAAATTCG 59.848 41.667 0.00 0.00 0.00 3.34
918 958 6.454318 CCGTCATCTTGTCTGAAAATTCGTAG 60.454 42.308 0.00 0.00 0.00 3.51
919 959 6.244275 GTCATCTTGTCTGAAAATTCGTAGC 58.756 40.000 0.00 0.00 0.00 3.58
920 960 5.931724 TCATCTTGTCTGAAAATTCGTAGCA 59.068 36.000 0.00 0.00 0.00 3.49
921 961 5.845985 TCTTGTCTGAAAATTCGTAGCAG 57.154 39.130 0.00 0.00 0.00 4.24
924 964 3.186409 TGTCTGAAAATTCGTAGCAGTGC 59.814 43.478 7.13 7.13 0.00 4.40
926 966 3.433274 TCTGAAAATTCGTAGCAGTGCTG 59.567 43.478 27.97 12.09 40.10 4.41
937 977 3.931768 CAGTGCTGCTTCTTCCTCT 57.068 52.632 0.00 0.00 0.00 3.69
938 978 1.440708 CAGTGCTGCTTCTTCCTCTG 58.559 55.000 0.00 0.00 0.00 3.35
939 979 1.001746 CAGTGCTGCTTCTTCCTCTGA 59.998 52.381 0.00 0.00 0.00 3.27
940 980 1.907936 AGTGCTGCTTCTTCCTCTGAT 59.092 47.619 0.00 0.00 0.00 2.90
941 981 3.102972 AGTGCTGCTTCTTCCTCTGATA 58.897 45.455 0.00 0.00 0.00 2.15
942 982 3.132646 AGTGCTGCTTCTTCCTCTGATAG 59.867 47.826 0.00 0.00 0.00 2.08
964 1004 2.490165 GATTCCCTCGACTCGGTCA 58.510 57.895 0.00 0.00 32.09 4.02
969 1009 1.064906 TCCCTCGACTCGGTCAGTATT 60.065 52.381 0.00 0.00 34.41 1.89
970 1010 1.065701 CCCTCGACTCGGTCAGTATTG 59.934 57.143 0.00 0.00 34.41 1.90
971 1011 2.014857 CCTCGACTCGGTCAGTATTGA 58.985 52.381 0.00 0.00 34.41 2.57
972 1012 2.032302 CCTCGACTCGGTCAGTATTGAG 59.968 54.545 0.00 0.00 34.41 3.02
975 1027 2.539953 CGACTCGGTCAGTATTGAGAGC 60.540 54.545 4.89 0.00 34.41 4.09
987 1039 0.942410 TTGAGAGCGTACGTGCCAAC 60.942 55.000 17.90 0.00 34.65 3.77
993 1045 0.110823 GCGTACGTGCCAACAAGAAG 60.111 55.000 17.90 0.00 0.00 2.85
994 1046 1.493772 CGTACGTGCCAACAAGAAGA 58.506 50.000 7.22 0.00 0.00 2.87
997 1049 3.676172 CGTACGTGCCAACAAGAAGAATA 59.324 43.478 7.22 0.00 0.00 1.75
1318 1379 0.179108 CCGGGACCTTAGCTTCTTCG 60.179 60.000 0.00 0.00 0.00 3.79
1830 5570 0.957888 GGCTGCTCAAAGTCTGGTCC 60.958 60.000 0.00 0.00 0.00 4.46
2165 5923 1.326213 ATGGAGCGGTGAGGTCTGAG 61.326 60.000 0.00 0.00 46.05 3.35
2189 5949 0.529992 GCCTAACCCATCGAACCGAG 60.530 60.000 0.00 0.00 39.91 4.63
2192 5952 2.102588 CCTAACCCATCGAACCGAGATT 59.897 50.000 0.00 0.00 39.91 2.40
2213 5973 0.035439 AATGAATCGCTCCGTGGGTT 60.035 50.000 0.00 0.00 0.00 4.11
2218 5978 0.814010 ATCGCTCCGTGGGTTAATGC 60.814 55.000 0.00 0.00 0.00 3.56
2228 5988 0.802494 GGGTTAATGCACACTGGACG 59.198 55.000 0.00 0.00 0.00 4.79
2244 6004 3.032609 CGCAGCGATCCGATGGTC 61.033 66.667 9.98 0.00 43.71 4.02
2264 6024 1.133025 CAACGTGGCTCCATCCATTTC 59.867 52.381 0.00 0.00 38.57 2.17
2267 6027 1.685148 GTGGCTCCATCCATTTCCTC 58.315 55.000 0.00 0.00 38.57 3.71
2272 6032 2.706350 CTCCATCCATTTCCTCCCCTA 58.294 52.381 0.00 0.00 0.00 3.53
2349 6114 6.913873 TGGAACACTTTTCTTACACACTAC 57.086 37.500 0.00 0.00 0.00 2.73
2350 6115 6.408035 TGGAACACTTTTCTTACACACTACA 58.592 36.000 0.00 0.00 0.00 2.74
2351 6116 6.879993 TGGAACACTTTTCTTACACACTACAA 59.120 34.615 0.00 0.00 0.00 2.41
2352 6117 7.554835 TGGAACACTTTTCTTACACACTACAAT 59.445 33.333 0.00 0.00 0.00 2.71
2353 6118 8.068380 GGAACACTTTTCTTACACACTACAATC 58.932 37.037 0.00 0.00 0.00 2.67
2354 6119 8.500753 AACACTTTTCTTACACACTACAATCA 57.499 30.769 0.00 0.00 0.00 2.57
2355 6120 8.500753 ACACTTTTCTTACACACTACAATCAA 57.499 30.769 0.00 0.00 0.00 2.57
2356 6121 8.952278 ACACTTTTCTTACACACTACAATCAAA 58.048 29.630 0.00 0.00 0.00 2.69
2357 6122 9.781834 CACTTTTCTTACACACTACAATCAAAA 57.218 29.630 0.00 0.00 0.00 2.44
2361 6126 8.795786 TTCTTACACACTACAATCAAAATTGC 57.204 30.769 0.00 0.00 45.16 3.56
2362 6127 8.165239 TCTTACACACTACAATCAAAATTGCT 57.835 30.769 0.00 0.00 45.16 3.91
2363 6128 8.289618 TCTTACACACTACAATCAAAATTGCTC 58.710 33.333 0.00 0.00 45.16 4.26
2364 6129 5.772521 ACACACTACAATCAAAATTGCTCC 58.227 37.500 0.00 0.00 45.16 4.70
2365 6130 5.301551 ACACACTACAATCAAAATTGCTCCA 59.698 36.000 0.00 0.00 45.16 3.86
2366 6131 6.015180 ACACACTACAATCAAAATTGCTCCAT 60.015 34.615 0.00 0.00 45.16 3.41
2367 6132 7.176515 ACACACTACAATCAAAATTGCTCCATA 59.823 33.333 0.00 0.00 45.16 2.74
2368 6133 7.485913 CACACTACAATCAAAATTGCTCCATAC 59.514 37.037 0.00 0.00 45.16 2.39
2369 6134 7.176515 ACACTACAATCAAAATTGCTCCATACA 59.823 33.333 0.00 0.00 45.16 2.29
2370 6135 7.485913 CACTACAATCAAAATTGCTCCATACAC 59.514 37.037 0.00 0.00 45.16 2.90
2371 6136 6.594788 ACAATCAAAATTGCTCCATACACT 57.405 33.333 0.00 0.00 45.16 3.55
2372 6137 6.996509 ACAATCAAAATTGCTCCATACACTT 58.003 32.000 0.00 0.00 45.16 3.16
2373 6138 7.444299 ACAATCAAAATTGCTCCATACACTTT 58.556 30.769 0.00 0.00 45.16 2.66
2374 6139 7.599998 ACAATCAAAATTGCTCCATACACTTTC 59.400 33.333 0.00 0.00 45.16 2.62
2375 6140 6.024552 TCAAAATTGCTCCATACACTTTCC 57.975 37.500 0.00 0.00 0.00 3.13
2433 6198 2.932614 GTCTGCATCGCATACACTTCTT 59.067 45.455 0.00 0.00 38.13 2.52
2450 6215 6.663953 ACACTTCTTTACTCAGTCTGGCTATA 59.336 38.462 0.00 0.00 0.00 1.31
2518 6290 0.698238 TTACCTGCATGGGCTGAACT 59.302 50.000 7.06 0.00 41.06 3.01
2599 6373 3.643199 TTGTATGCAAGGCCTGATGTA 57.357 42.857 5.69 0.55 0.00 2.29
2604 6378 1.027357 GCAAGGCCTGATGTATGGTG 58.973 55.000 5.69 0.00 0.00 4.17
2631 6405 4.288626 TCTTTGGCTAGTTGGTGAGGTTAT 59.711 41.667 0.00 0.00 0.00 1.89
2677 6451 9.618890 ACATCATAAGCACAACAGACTATAAAT 57.381 29.630 0.00 0.00 0.00 1.40
2750 6525 5.009610 AGTTCAACGCATAAACCATCAACTT 59.990 36.000 0.00 0.00 0.00 2.66
2904 6679 1.270358 GGAGTGAGGAGCTTGAACGTT 60.270 52.381 0.00 0.00 0.00 3.99
2906 6681 3.368531 GGAGTGAGGAGCTTGAACGTTAT 60.369 47.826 0.00 0.00 0.00 1.89
2927 6704 7.539436 GTTATCATGTAGCCGATCTTGATCTA 58.461 38.462 8.70 0.00 33.04 1.98
3000 6777 0.468226 TCAGCTTGACCGTCACCTTT 59.532 50.000 0.00 0.00 0.00 3.11
3024 6801 0.613260 AGCAGCCGATGTTGTTCCTA 59.387 50.000 0.00 0.00 0.00 2.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.712709 TCACGTGGTGACAAAAAGGAA 58.287 42.857 17.00 0.00 46.06 3.36
10 11 0.461961 TCACATGTGTCACGTGGTGA 59.538 50.000 25.31 21.46 39.36 4.02
11 12 1.511850 ATCACATGTGTCACGTGGTG 58.488 50.000 25.31 19.97 39.36 4.17
12 13 3.325870 CTTATCACATGTGTCACGTGGT 58.674 45.455 25.31 14.24 39.36 4.16
13 14 2.094258 GCTTATCACATGTGTCACGTGG 59.906 50.000 25.31 15.75 39.36 4.94
14 15 2.736192 TGCTTATCACATGTGTCACGTG 59.264 45.455 24.63 21.25 40.80 4.49
15 16 3.038788 TGCTTATCACATGTGTCACGT 57.961 42.857 24.63 9.96 0.00 4.49
16 17 4.494690 GGATTGCTTATCACATGTGTCACG 60.495 45.833 24.63 12.41 34.77 4.35
17 18 4.395854 TGGATTGCTTATCACATGTGTCAC 59.604 41.667 24.63 11.82 34.77 3.67
18 19 4.587891 TGGATTGCTTATCACATGTGTCA 58.412 39.130 24.63 11.42 34.77 3.58
19 20 5.565592 TTGGATTGCTTATCACATGTGTC 57.434 39.130 24.63 12.27 34.77 3.67
20 21 5.243507 TGTTTGGATTGCTTATCACATGTGT 59.756 36.000 24.63 14.61 34.77 3.72
21 22 5.712004 TGTTTGGATTGCTTATCACATGTG 58.288 37.500 20.18 20.18 34.77 3.21
22 23 5.981088 TGTTTGGATTGCTTATCACATGT 57.019 34.783 0.00 0.00 34.77 3.21
23 24 7.837202 AATTGTTTGGATTGCTTATCACATG 57.163 32.000 0.00 0.00 34.77 3.21
24 25 9.941325 TTTAATTGTTTGGATTGCTTATCACAT 57.059 25.926 0.00 0.00 34.77 3.21
25 26 9.770097 TTTTAATTGTTTGGATTGCTTATCACA 57.230 25.926 0.00 0.00 34.77 3.58
76 77 6.377327 AACGAGCTTCAGAAGATTGAAAAA 57.623 33.333 20.59 0.00 36.69 1.94
77 78 7.672983 ATAACGAGCTTCAGAAGATTGAAAA 57.327 32.000 20.59 7.12 36.69 2.29
78 79 8.948631 ATATAACGAGCTTCAGAAGATTGAAA 57.051 30.769 20.59 9.28 36.69 2.69
79 80 8.948631 AATATAACGAGCTTCAGAAGATTGAA 57.051 30.769 20.59 9.60 35.83 2.69
82 83 9.262358 GGTTAATATAACGAGCTTCAGAAGATT 57.738 33.333 14.86 4.76 0.00 2.40
83 84 7.873505 GGGTTAATATAACGAGCTTCAGAAGAT 59.126 37.037 14.86 7.64 0.00 2.40
84 85 7.147794 TGGGTTAATATAACGAGCTTCAGAAGA 60.148 37.037 14.86 0.00 0.00 2.87
85 86 6.984474 TGGGTTAATATAACGAGCTTCAGAAG 59.016 38.462 5.72 5.72 0.00 2.85
86 87 6.880484 TGGGTTAATATAACGAGCTTCAGAA 58.120 36.000 0.00 0.00 0.00 3.02
87 88 6.474140 TGGGTTAATATAACGAGCTTCAGA 57.526 37.500 0.00 0.00 0.00 3.27
88 89 7.730364 AATGGGTTAATATAACGAGCTTCAG 57.270 36.000 0.00 0.00 0.00 3.02
89 90 7.468084 GCAAATGGGTTAATATAACGAGCTTCA 60.468 37.037 0.00 0.00 0.00 3.02
90 91 6.856426 GCAAATGGGTTAATATAACGAGCTTC 59.144 38.462 0.00 0.00 0.00 3.86
91 92 6.546034 AGCAAATGGGTTAATATAACGAGCTT 59.454 34.615 0.00 0.00 0.00 3.74
92 93 6.062095 AGCAAATGGGTTAATATAACGAGCT 58.938 36.000 0.00 0.00 0.00 4.09
93 94 6.313744 AGCAAATGGGTTAATATAACGAGC 57.686 37.500 0.00 0.00 0.00 5.03
103 104 9.868277 CAACTTATCAATAAGCAAATGGGTTAA 57.132 29.630 9.22 0.00 42.28 2.01
104 105 8.474025 CCAACTTATCAATAAGCAAATGGGTTA 58.526 33.333 9.22 0.00 42.66 2.85
105 106 7.330262 CCAACTTATCAATAAGCAAATGGGTT 58.670 34.615 9.22 0.00 42.66 4.11
106 107 6.630188 GCCAACTTATCAATAAGCAAATGGGT 60.630 38.462 17.24 0.00 42.66 4.51
107 108 5.754890 GCCAACTTATCAATAAGCAAATGGG 59.245 40.000 17.24 6.78 42.66 4.00
108 109 5.754890 GGCCAACTTATCAATAAGCAAATGG 59.245 40.000 0.00 12.20 42.66 3.16
109 110 5.459762 CGGCCAACTTATCAATAAGCAAATG 59.540 40.000 2.24 4.78 42.66 2.32
110 111 5.359576 TCGGCCAACTTATCAATAAGCAAAT 59.640 36.000 2.24 0.00 42.66 2.32
111 112 4.702612 TCGGCCAACTTATCAATAAGCAAA 59.297 37.500 2.24 0.00 42.66 3.68
112 113 4.265893 TCGGCCAACTTATCAATAAGCAA 58.734 39.130 2.24 0.00 42.66 3.91
113 114 3.876914 CTCGGCCAACTTATCAATAAGCA 59.123 43.478 2.24 0.00 42.66 3.91
114 115 3.877508 ACTCGGCCAACTTATCAATAAGC 59.122 43.478 2.24 0.00 42.66 3.09
115 116 6.436843 AAACTCGGCCAACTTATCAATAAG 57.563 37.500 2.24 7.98 44.07 1.73
116 117 6.431543 TCAAAACTCGGCCAACTTATCAATAA 59.568 34.615 2.24 0.00 0.00 1.40
117 118 5.941058 TCAAAACTCGGCCAACTTATCAATA 59.059 36.000 2.24 0.00 0.00 1.90
118 119 4.764823 TCAAAACTCGGCCAACTTATCAAT 59.235 37.500 2.24 0.00 0.00 2.57
119 120 4.023536 GTCAAAACTCGGCCAACTTATCAA 60.024 41.667 2.24 0.00 0.00 2.57
120 121 3.500680 GTCAAAACTCGGCCAACTTATCA 59.499 43.478 2.24 0.00 0.00 2.15
121 122 3.500680 TGTCAAAACTCGGCCAACTTATC 59.499 43.478 2.24 0.00 0.00 1.75
122 123 3.482436 TGTCAAAACTCGGCCAACTTAT 58.518 40.909 2.24 0.00 0.00 1.73
123 124 2.920524 TGTCAAAACTCGGCCAACTTA 58.079 42.857 2.24 0.00 0.00 2.24
124 125 1.757682 TGTCAAAACTCGGCCAACTT 58.242 45.000 2.24 0.00 0.00 2.66
125 126 1.981256 ATGTCAAAACTCGGCCAACT 58.019 45.000 2.24 0.00 0.00 3.16
126 127 2.550606 TGTATGTCAAAACTCGGCCAAC 59.449 45.455 2.24 0.00 0.00 3.77
127 128 2.550606 GTGTATGTCAAAACTCGGCCAA 59.449 45.455 2.24 0.00 0.00 4.52
128 129 2.147958 GTGTATGTCAAAACTCGGCCA 58.852 47.619 2.24 0.00 0.00 5.36
129 130 2.423577 AGTGTATGTCAAAACTCGGCC 58.576 47.619 0.00 0.00 0.00 6.13
130 131 5.233689 GGTATAGTGTATGTCAAAACTCGGC 59.766 44.000 0.00 0.00 0.00 5.54
131 132 5.751990 GGGTATAGTGTATGTCAAAACTCGG 59.248 44.000 0.00 0.00 0.00 4.63
132 133 6.255020 GTGGGTATAGTGTATGTCAAAACTCG 59.745 42.308 0.00 0.00 0.00 4.18
133 134 6.255020 CGTGGGTATAGTGTATGTCAAAACTC 59.745 42.308 0.00 0.00 0.00 3.01
134 135 6.103997 CGTGGGTATAGTGTATGTCAAAACT 58.896 40.000 0.00 0.00 0.00 2.66
135 136 5.870978 ACGTGGGTATAGTGTATGTCAAAAC 59.129 40.000 0.00 0.00 0.00 2.43
136 137 6.040209 ACGTGGGTATAGTGTATGTCAAAA 57.960 37.500 0.00 0.00 0.00 2.44
137 138 5.664294 ACGTGGGTATAGTGTATGTCAAA 57.336 39.130 0.00 0.00 0.00 2.69
138 139 6.377996 AGTTACGTGGGTATAGTGTATGTCAA 59.622 38.462 0.00 0.00 0.00 3.18
139 140 5.887598 AGTTACGTGGGTATAGTGTATGTCA 59.112 40.000 0.00 0.00 0.00 3.58
140 141 6.382869 AGTTACGTGGGTATAGTGTATGTC 57.617 41.667 0.00 0.00 0.00 3.06
141 142 6.604795 AGAAGTTACGTGGGTATAGTGTATGT 59.395 38.462 0.00 0.00 0.00 2.29
142 143 7.035840 AGAAGTTACGTGGGTATAGTGTATG 57.964 40.000 0.00 0.00 0.00 2.39
143 144 6.264067 GGAGAAGTTACGTGGGTATAGTGTAT 59.736 42.308 0.00 0.00 0.00 2.29
144 145 5.590259 GGAGAAGTTACGTGGGTATAGTGTA 59.410 44.000 0.00 0.00 0.00 2.90
145 146 4.400567 GGAGAAGTTACGTGGGTATAGTGT 59.599 45.833 0.00 0.00 0.00 3.55
146 147 4.400251 TGGAGAAGTTACGTGGGTATAGTG 59.600 45.833 0.00 0.00 0.00 2.74
147 148 4.603131 TGGAGAAGTTACGTGGGTATAGT 58.397 43.478 0.00 0.00 0.00 2.12
148 149 5.126707 AGTTGGAGAAGTTACGTGGGTATAG 59.873 44.000 0.00 0.00 0.00 1.31
149 150 5.018809 AGTTGGAGAAGTTACGTGGGTATA 58.981 41.667 0.00 0.00 0.00 1.47
150 151 3.836562 AGTTGGAGAAGTTACGTGGGTAT 59.163 43.478 0.00 0.00 0.00 2.73
151 152 3.233507 AGTTGGAGAAGTTACGTGGGTA 58.766 45.455 0.00 0.00 0.00 3.69
152 153 2.036862 GAGTTGGAGAAGTTACGTGGGT 59.963 50.000 0.00 0.00 0.00 4.51
153 154 2.036733 TGAGTTGGAGAAGTTACGTGGG 59.963 50.000 0.00 0.00 0.00 4.61
154 155 3.380479 TGAGTTGGAGAAGTTACGTGG 57.620 47.619 0.00 0.00 0.00 4.94
155 156 4.152402 CCATTGAGTTGGAGAAGTTACGTG 59.848 45.833 0.00 0.00 39.25 4.49
156 157 4.202326 ACCATTGAGTTGGAGAAGTTACGT 60.202 41.667 0.00 0.00 39.25 3.57
157 158 4.315803 ACCATTGAGTTGGAGAAGTTACG 58.684 43.478 0.00 0.00 39.25 3.18
158 159 6.635030 AAACCATTGAGTTGGAGAAGTTAC 57.365 37.500 0.00 0.00 39.25 2.50
159 160 7.654022 AAAAACCATTGAGTTGGAGAAGTTA 57.346 32.000 0.00 0.00 39.25 2.24
160 161 6.544928 AAAAACCATTGAGTTGGAGAAGTT 57.455 33.333 0.00 0.00 39.25 2.66
161 162 7.654022 TTAAAAACCATTGAGTTGGAGAAGT 57.346 32.000 0.00 0.00 39.25 3.01
162 163 8.579863 AGATTAAAAACCATTGAGTTGGAGAAG 58.420 33.333 0.00 0.00 39.25 2.85
163 164 8.477419 AGATTAAAAACCATTGAGTTGGAGAA 57.523 30.769 0.00 0.00 39.25 2.87
164 165 7.176690 GGAGATTAAAAACCATTGAGTTGGAGA 59.823 37.037 0.00 0.00 39.25 3.71
165 166 7.177392 AGGAGATTAAAAACCATTGAGTTGGAG 59.823 37.037 0.00 0.00 39.25 3.86
166 167 7.010160 AGGAGATTAAAAACCATTGAGTTGGA 58.990 34.615 0.00 0.00 39.25 3.53
167 168 7.232118 AGGAGATTAAAAACCATTGAGTTGG 57.768 36.000 0.00 0.00 42.82 3.77
168 169 7.315890 GGAGGAGATTAAAAACCATTGAGTTG 58.684 38.462 0.00 0.00 0.00 3.16
169 170 6.437477 GGGAGGAGATTAAAAACCATTGAGTT 59.563 38.462 0.00 0.00 0.00 3.01
170 171 5.952347 GGGAGGAGATTAAAAACCATTGAGT 59.048 40.000 0.00 0.00 0.00 3.41
171 172 5.951747 TGGGAGGAGATTAAAAACCATTGAG 59.048 40.000 0.00 0.00 0.00 3.02
172 173 5.714806 GTGGGAGGAGATTAAAAACCATTGA 59.285 40.000 0.00 0.00 0.00 2.57
173 174 5.716703 AGTGGGAGGAGATTAAAAACCATTG 59.283 40.000 0.00 0.00 0.00 2.82
174 175 5.903923 AGTGGGAGGAGATTAAAAACCATT 58.096 37.500 0.00 0.00 0.00 3.16
175 176 5.536497 AGTGGGAGGAGATTAAAAACCAT 57.464 39.130 0.00 0.00 0.00 3.55
176 177 5.333566 AAGTGGGAGGAGATTAAAAACCA 57.666 39.130 0.00 0.00 0.00 3.67
177 178 6.717997 TGTTAAGTGGGAGGAGATTAAAAACC 59.282 38.462 0.00 0.00 0.00 3.27
178 179 7.572539 CGTGTTAAGTGGGAGGAGATTAAAAAC 60.573 40.741 0.00 0.00 0.00 2.43
179 180 6.428771 CGTGTTAAGTGGGAGGAGATTAAAAA 59.571 38.462 0.00 0.00 0.00 1.94
180 181 5.935789 CGTGTTAAGTGGGAGGAGATTAAAA 59.064 40.000 0.00 0.00 0.00 1.52
181 182 5.484715 CGTGTTAAGTGGGAGGAGATTAAA 58.515 41.667 0.00 0.00 0.00 1.52
182 183 4.622220 GCGTGTTAAGTGGGAGGAGATTAA 60.622 45.833 0.00 0.00 0.00 1.40
183 184 3.118884 GCGTGTTAAGTGGGAGGAGATTA 60.119 47.826 0.00 0.00 0.00 1.75
184 185 2.354805 GCGTGTTAAGTGGGAGGAGATT 60.355 50.000 0.00 0.00 0.00 2.40
185 186 1.207329 GCGTGTTAAGTGGGAGGAGAT 59.793 52.381 0.00 0.00 0.00 2.75
186 187 0.606604 GCGTGTTAAGTGGGAGGAGA 59.393 55.000 0.00 0.00 0.00 3.71
187 188 0.320374 TGCGTGTTAAGTGGGAGGAG 59.680 55.000 0.00 0.00 0.00 3.69
188 189 0.981183 ATGCGTGTTAAGTGGGAGGA 59.019 50.000 0.00 0.00 0.00 3.71
189 190 1.369625 GATGCGTGTTAAGTGGGAGG 58.630 55.000 0.00 0.00 0.00 4.30
190 191 0.999406 CGATGCGTGTTAAGTGGGAG 59.001 55.000 0.00 0.00 0.00 4.30
191 192 0.319083 ACGATGCGTGTTAAGTGGGA 59.681 50.000 0.00 0.00 39.18 4.37
192 193 0.719465 GACGATGCGTGTTAAGTGGG 59.281 55.000 0.00 0.00 41.37 4.61
193 194 0.365523 CGACGATGCGTGTTAAGTGG 59.634 55.000 0.00 0.00 41.37 4.00
194 195 0.365523 CCGACGATGCGTGTTAAGTG 59.634 55.000 0.00 0.00 41.37 3.16
195 196 1.349259 GCCGACGATGCGTGTTAAGT 61.349 55.000 0.00 0.00 41.37 2.24
196 197 1.343821 GCCGACGATGCGTGTTAAG 59.656 57.895 0.00 0.00 41.37 1.85
197 198 0.944788 TTGCCGACGATGCGTGTTAA 60.945 50.000 0.00 0.00 41.37 2.01
198 199 0.738063 ATTGCCGACGATGCGTGTTA 60.738 50.000 0.00 0.00 41.37 2.41
199 200 1.966493 GATTGCCGACGATGCGTGTT 61.966 55.000 0.00 0.00 41.37 3.32
200 201 2.434185 ATTGCCGACGATGCGTGT 60.434 55.556 0.00 0.00 41.37 4.49
201 202 1.695893 AAGATTGCCGACGATGCGTG 61.696 55.000 0.00 0.00 41.37 5.34
202 203 1.447838 AAGATTGCCGACGATGCGT 60.448 52.632 0.00 0.00 45.10 5.24
203 204 1.011904 CAAGATTGCCGACGATGCG 60.012 57.895 0.00 0.00 0.00 4.73
204 205 0.726827 TTCAAGATTGCCGACGATGC 59.273 50.000 0.00 0.00 0.00 3.91
205 206 3.680642 ATTTCAAGATTGCCGACGATG 57.319 42.857 0.00 0.00 0.00 3.84
206 207 5.811399 TTTATTTCAAGATTGCCGACGAT 57.189 34.783 0.00 0.00 0.00 3.73
207 208 5.811399 ATTTATTTCAAGATTGCCGACGA 57.189 34.783 0.00 0.00 0.00 4.20
208 209 6.027131 TGAATTTATTTCAAGATTGCCGACG 58.973 36.000 0.00 0.00 41.38 5.12
209 210 7.810766 TTGAATTTATTTCAAGATTGCCGAC 57.189 32.000 0.00 0.00 46.80 4.79
258 259 0.908198 GCTCATCAGGGTCAAGTCCT 59.092 55.000 0.00 0.00 34.39 3.85
259 260 0.908198 AGCTCATCAGGGTCAAGTCC 59.092 55.000 0.00 0.00 0.00 3.85
260 261 1.406614 CCAGCTCATCAGGGTCAAGTC 60.407 57.143 0.00 0.00 0.00 3.01
261 262 0.617413 CCAGCTCATCAGGGTCAAGT 59.383 55.000 0.00 0.00 0.00 3.16
262 263 0.107312 CCCAGCTCATCAGGGTCAAG 60.107 60.000 0.00 0.00 36.79 3.02
263 264 0.547471 TCCCAGCTCATCAGGGTCAA 60.547 55.000 5.99 0.00 41.91 3.18
264 265 0.326904 ATCCCAGCTCATCAGGGTCA 60.327 55.000 5.99 0.00 41.91 4.02
265 266 1.346068 GTATCCCAGCTCATCAGGGTC 59.654 57.143 5.99 0.00 41.91 4.46
266 267 1.428869 GTATCCCAGCTCATCAGGGT 58.571 55.000 5.99 0.00 41.91 4.34
267 268 0.689623 GGTATCCCAGCTCATCAGGG 59.310 60.000 0.00 0.00 42.56 4.45
268 269 1.071385 GTGGTATCCCAGCTCATCAGG 59.929 57.143 0.00 0.00 42.94 3.86
269 270 2.045524 AGTGGTATCCCAGCTCATCAG 58.954 52.381 0.00 0.00 42.94 2.90
270 271 2.180946 AGTGGTATCCCAGCTCATCA 57.819 50.000 0.00 0.00 42.94 3.07
271 272 3.196685 GGATAGTGGTATCCCAGCTCATC 59.803 52.174 0.53 0.00 46.69 2.92
272 273 3.177228 GGATAGTGGTATCCCAGCTCAT 58.823 50.000 0.53 0.00 46.69 2.90
273 274 2.609747 GGATAGTGGTATCCCAGCTCA 58.390 52.381 0.53 0.00 46.69 4.26
297 298 8.564574 GCGAATCAACCTGTAATTGGATAATTA 58.435 33.333 0.00 0.00 37.64 1.40
298 299 7.285401 AGCGAATCAACCTGTAATTGGATAATT 59.715 33.333 0.00 0.00 39.69 1.40
299 300 6.772716 AGCGAATCAACCTGTAATTGGATAAT 59.227 34.615 0.00 0.00 0.00 1.28
300 301 6.119536 AGCGAATCAACCTGTAATTGGATAA 58.880 36.000 0.00 0.00 0.00 1.75
301 302 5.680619 AGCGAATCAACCTGTAATTGGATA 58.319 37.500 0.00 0.00 0.00 2.59
302 303 4.526970 AGCGAATCAACCTGTAATTGGAT 58.473 39.130 0.00 0.00 0.00 3.41
303 304 3.938963 GAGCGAATCAACCTGTAATTGGA 59.061 43.478 0.00 0.00 0.00 3.53
304 305 3.065371 GGAGCGAATCAACCTGTAATTGG 59.935 47.826 0.00 0.00 0.00 3.16
305 306 3.065371 GGGAGCGAATCAACCTGTAATTG 59.935 47.826 0.00 0.00 0.00 2.32
306 307 3.054361 AGGGAGCGAATCAACCTGTAATT 60.054 43.478 0.00 0.00 0.00 1.40
307 308 2.505819 AGGGAGCGAATCAACCTGTAAT 59.494 45.455 0.00 0.00 0.00 1.89
308 309 1.906574 AGGGAGCGAATCAACCTGTAA 59.093 47.619 0.00 0.00 0.00 2.41
309 310 1.568504 AGGGAGCGAATCAACCTGTA 58.431 50.000 0.00 0.00 0.00 2.74
310 311 0.693049 AAGGGAGCGAATCAACCTGT 59.307 50.000 0.00 0.00 0.00 4.00
311 312 2.093447 AGTAAGGGAGCGAATCAACCTG 60.093 50.000 0.00 0.00 0.00 4.00
312 313 2.168728 GAGTAAGGGAGCGAATCAACCT 59.831 50.000 0.00 0.00 0.00 3.50
313 314 2.093658 TGAGTAAGGGAGCGAATCAACC 60.094 50.000 0.00 0.00 0.00 3.77
314 315 3.247006 TGAGTAAGGGAGCGAATCAAC 57.753 47.619 0.00 0.00 0.00 3.18
315 316 3.973206 TTGAGTAAGGGAGCGAATCAA 57.027 42.857 0.00 0.00 0.00 2.57
316 317 3.197766 ACATTGAGTAAGGGAGCGAATCA 59.802 43.478 0.00 0.00 0.00 2.57
317 318 3.798202 ACATTGAGTAAGGGAGCGAATC 58.202 45.455 0.00 0.00 0.00 2.52
318 319 3.914426 ACATTGAGTAAGGGAGCGAAT 57.086 42.857 0.00 0.00 0.00 3.34
319 320 3.007506 TCAACATTGAGTAAGGGAGCGAA 59.992 43.478 0.00 0.00 32.50 4.70
320 321 2.565391 TCAACATTGAGTAAGGGAGCGA 59.435 45.455 0.00 0.00 32.50 4.93
321 322 2.972625 TCAACATTGAGTAAGGGAGCG 58.027 47.619 0.00 0.00 32.50 5.03
322 323 5.049129 GCATATCAACATTGAGTAAGGGAGC 60.049 44.000 0.23 0.00 41.08 4.70
323 324 5.178252 CGCATATCAACATTGAGTAAGGGAG 59.822 44.000 0.23 0.00 41.08 4.30
324 325 5.056480 CGCATATCAACATTGAGTAAGGGA 58.944 41.667 0.23 0.00 41.08 4.20
325 326 5.056480 TCGCATATCAACATTGAGTAAGGG 58.944 41.667 0.23 0.13 41.08 3.95
326 327 6.479990 TCTTCGCATATCAACATTGAGTAAGG 59.520 38.462 0.23 0.00 41.08 2.69
327 328 7.468922 TCTTCGCATATCAACATTGAGTAAG 57.531 36.000 0.23 0.00 41.08 2.34
328 329 7.841915 TTCTTCGCATATCAACATTGAGTAA 57.158 32.000 0.23 0.00 41.08 2.24
329 330 7.710475 TCATTCTTCGCATATCAACATTGAGTA 59.290 33.333 0.23 0.00 41.08 2.59
330 331 6.539826 TCATTCTTCGCATATCAACATTGAGT 59.460 34.615 0.23 0.00 41.08 3.41
331 332 6.849811 GTCATTCTTCGCATATCAACATTGAG 59.150 38.462 0.23 0.00 41.08 3.02
332 333 6.238456 GGTCATTCTTCGCATATCAACATTGA 60.238 38.462 0.00 0.00 42.14 2.57
333 334 5.911280 GGTCATTCTTCGCATATCAACATTG 59.089 40.000 0.00 0.00 0.00 2.82
334 335 5.589855 TGGTCATTCTTCGCATATCAACATT 59.410 36.000 0.00 0.00 0.00 2.71
335 336 5.125356 TGGTCATTCTTCGCATATCAACAT 58.875 37.500 0.00 0.00 0.00 2.71
336 337 4.512484 TGGTCATTCTTCGCATATCAACA 58.488 39.130 0.00 0.00 0.00 3.33
337 338 5.484173 TTGGTCATTCTTCGCATATCAAC 57.516 39.130 0.00 0.00 0.00 3.18
338 339 5.447144 CGTTTGGTCATTCTTCGCATATCAA 60.447 40.000 0.00 0.00 0.00 2.57
339 340 4.033932 CGTTTGGTCATTCTTCGCATATCA 59.966 41.667 0.00 0.00 0.00 2.15
340 341 4.518217 CGTTTGGTCATTCTTCGCATATC 58.482 43.478 0.00 0.00 0.00 1.63
341 342 3.312421 CCGTTTGGTCATTCTTCGCATAT 59.688 43.478 0.00 0.00 0.00 1.78
342 343 2.675844 CCGTTTGGTCATTCTTCGCATA 59.324 45.455 0.00 0.00 0.00 3.14
343 344 1.468520 CCGTTTGGTCATTCTTCGCAT 59.531 47.619 0.00 0.00 0.00 4.73
344 345 0.871722 CCGTTTGGTCATTCTTCGCA 59.128 50.000 0.00 0.00 0.00 5.10
345 346 1.153353 TCCGTTTGGTCATTCTTCGC 58.847 50.000 0.00 0.00 36.30 4.70
346 347 3.889196 TTTCCGTTTGGTCATTCTTCG 57.111 42.857 0.00 0.00 36.30 3.79
347 348 3.920412 GCATTTCCGTTTGGTCATTCTTC 59.080 43.478 0.00 0.00 36.30 2.87
348 349 3.611530 CGCATTTCCGTTTGGTCATTCTT 60.612 43.478 0.00 0.00 36.30 2.52
349 350 2.095263 CGCATTTCCGTTTGGTCATTCT 60.095 45.455 0.00 0.00 36.30 2.40
350 351 2.250188 CGCATTTCCGTTTGGTCATTC 58.750 47.619 0.00 0.00 36.30 2.67
351 352 1.611491 ACGCATTTCCGTTTGGTCATT 59.389 42.857 0.00 0.00 38.47 2.57
352 353 1.199097 GACGCATTTCCGTTTGGTCAT 59.801 47.619 0.00 0.00 42.24 3.06
353 354 0.589223 GACGCATTTCCGTTTGGTCA 59.411 50.000 0.00 0.00 42.24 4.02
354 355 0.589223 TGACGCATTTCCGTTTGGTC 59.411 50.000 0.00 0.00 42.24 4.02
355 356 1.243902 ATGACGCATTTCCGTTTGGT 58.756 45.000 0.00 0.00 42.24 3.67
356 357 2.346099 AATGACGCATTTCCGTTTGG 57.654 45.000 0.09 0.00 42.24 3.28
357 358 2.159986 GCAAATGACGCATTTCCGTTTG 60.160 45.455 12.78 0.00 41.40 2.93
358 359 2.058057 GCAAATGACGCATTTCCGTTT 58.942 42.857 12.78 0.00 41.40 3.60
359 360 1.696988 GCAAATGACGCATTTCCGTT 58.303 45.000 12.78 0.00 41.40 4.44
360 361 0.454285 CGCAAATGACGCATTTCCGT 60.454 50.000 15.73 0.00 41.40 4.69
361 362 0.454285 ACGCAAATGACGCATTTCCG 60.454 50.000 19.79 19.79 46.40 4.30
362 363 0.984109 CACGCAAATGACGCATTTCC 59.016 50.000 12.78 5.76 41.40 3.13
363 364 1.685302 ACACGCAAATGACGCATTTC 58.315 45.000 12.78 8.63 41.40 2.17
364 365 1.786004 CAACACGCAAATGACGCATTT 59.214 42.857 10.67 10.67 43.71 2.32
365 366 1.001924 TCAACACGCAAATGACGCATT 60.002 42.857 0.09 0.09 35.39 3.56
366 367 0.590682 TCAACACGCAAATGACGCAT 59.409 45.000 0.00 0.00 0.00 4.73
367 368 0.041400 CTCAACACGCAAATGACGCA 60.041 50.000 0.00 0.00 0.00 5.24
383 384 1.354705 TCCGAAGTCTCCTTCTCCTCA 59.645 52.381 1.46 0.00 44.12 3.86
447 458 4.025145 GGTGGAAAAATAATAGAGACCGCG 60.025 45.833 0.00 0.00 0.00 6.46
456 467 2.683867 CGTGGCCGGTGGAAAAATAATA 59.316 45.455 1.90 0.00 0.00 0.98
535 546 2.178273 GGAATGAAACGGTGGCGC 59.822 61.111 0.00 0.00 0.00 6.53
543 554 0.523335 GCATCACCGCGGAATGAAAC 60.523 55.000 33.85 20.97 0.00 2.78
544 555 1.800032 GCATCACCGCGGAATGAAA 59.200 52.632 33.85 15.74 0.00 2.69
545 556 3.496711 GCATCACCGCGGAATGAA 58.503 55.556 33.85 17.21 0.00 2.57
569 580 2.409651 CTCTCGTAGCCGTGAGCC 59.590 66.667 2.34 0.00 44.60 4.70
574 585 0.526662 CTGGTTTCTCTCGTAGCCGT 59.473 55.000 0.00 0.00 35.01 5.68
575 586 0.809385 TCTGGTTTCTCTCGTAGCCG 59.191 55.000 0.00 0.00 0.00 5.52
579 590 4.216902 TGATTCGTTCTGGTTTCTCTCGTA 59.783 41.667 0.00 0.00 0.00 3.43
605 616 1.153549 GTAGCTGGACTTGGGCTCG 60.154 63.158 0.00 0.00 37.50 5.03
620 631 1.085091 AGCTAGGTCGTGACACGTAG 58.915 55.000 26.01 20.32 43.14 3.51
646 669 1.843368 AAGTGATAACCGTCGAGGGA 58.157 50.000 29.83 9.63 46.96 4.20
648 671 7.170889 TGGTGATAAGTGATAACCGTCGAGG 62.171 48.000 0.00 0.00 41.79 4.63
649 672 4.201980 TGGTGATAAGTGATAACCGTCGAG 60.202 45.833 0.00 0.00 41.79 4.04
650 673 3.695556 TGGTGATAAGTGATAACCGTCGA 59.304 43.478 0.00 0.00 41.79 4.20
651 674 3.795101 GTGGTGATAAGTGATAACCGTCG 59.205 47.826 0.00 0.00 41.79 5.12
652 675 4.565564 GTGTGGTGATAAGTGATAACCGTC 59.434 45.833 0.00 0.00 41.79 4.79
653 676 4.020928 TGTGTGGTGATAAGTGATAACCGT 60.021 41.667 0.00 0.00 41.79 4.83
655 678 5.234329 CGATGTGTGGTGATAAGTGATAACC 59.766 44.000 0.00 0.00 39.43 2.85
656 679 5.276868 GCGATGTGTGGTGATAAGTGATAAC 60.277 44.000 0.00 0.00 0.00 1.89
657 680 4.808895 GCGATGTGTGGTGATAAGTGATAA 59.191 41.667 0.00 0.00 0.00 1.75
658 681 4.368315 GCGATGTGTGGTGATAAGTGATA 58.632 43.478 0.00 0.00 0.00 2.15
659 682 3.198068 GCGATGTGTGGTGATAAGTGAT 58.802 45.455 0.00 0.00 0.00 3.06
660 683 2.616960 GCGATGTGTGGTGATAAGTGA 58.383 47.619 0.00 0.00 0.00 3.41
661 684 1.324435 CGCGATGTGTGGTGATAAGTG 59.676 52.381 0.00 0.00 0.00 3.16
662 685 1.640428 CGCGATGTGTGGTGATAAGT 58.360 50.000 0.00 0.00 0.00 2.24
663 686 0.301687 GCGCGATGTGTGGTGATAAG 59.698 55.000 12.10 0.00 0.00 1.73
664 687 0.390472 TGCGCGATGTGTGGTGATAA 60.390 50.000 12.10 0.00 0.00 1.75
665 688 0.805711 CTGCGCGATGTGTGGTGATA 60.806 55.000 12.10 0.00 0.00 2.15
673 696 2.456119 GGAGAACCTGCGCGATGTG 61.456 63.158 12.10 0.00 0.00 3.21
674 697 2.125512 GGAGAACCTGCGCGATGT 60.126 61.111 12.10 0.00 0.00 3.06
693 716 1.268625 ACGTGTATCAGTCGACAGCAA 59.731 47.619 19.50 0.00 0.00 3.91
741 777 3.778954 GCAGGGATAGAAATACTGCCT 57.221 47.619 0.00 0.00 46.47 4.75
744 780 3.406764 GCAGGCAGGGATAGAAATACTG 58.593 50.000 0.00 0.00 0.00 2.74
745 781 2.373502 GGCAGGCAGGGATAGAAATACT 59.626 50.000 0.00 0.00 0.00 2.12
746 782 2.784347 GGCAGGCAGGGATAGAAATAC 58.216 52.381 0.00 0.00 0.00 1.89
747 783 1.347707 CGGCAGGCAGGGATAGAAATA 59.652 52.381 0.00 0.00 0.00 1.40
773 809 3.766691 CGGGTGGTACCTGGTCCG 61.767 72.222 14.36 15.80 41.01 4.79
774 810 2.284112 TCGGGTGGTACCTGGTCC 60.284 66.667 14.36 10.02 44.85 4.46
775 811 2.653087 GGTCGGGTGGTACCTGGTC 61.653 68.421 14.36 1.15 44.85 4.02
776 812 2.605601 GGTCGGGTGGTACCTGGT 60.606 66.667 14.36 4.05 44.85 4.00
778 814 3.766691 CGGGTCGGGTGGTACCTG 61.767 72.222 14.36 0.25 46.14 4.00
779 815 3.951769 CTCGGGTCGGGTGGTACCT 62.952 68.421 14.36 0.00 38.64 3.08
780 816 2.837031 TACTCGGGTCGGGTGGTACC 62.837 65.000 4.43 4.43 42.10 3.34
781 817 0.753111 ATACTCGGGTCGGGTGGTAC 60.753 60.000 0.00 0.00 42.10 3.34
782 818 0.466189 GATACTCGGGTCGGGTGGTA 60.466 60.000 0.00 0.00 42.10 3.25
783 819 1.755783 GATACTCGGGTCGGGTGGT 60.756 63.158 0.00 0.00 42.10 4.16
784 820 2.496291 GGATACTCGGGTCGGGTGG 61.496 68.421 0.00 0.00 42.10 4.61
785 821 3.126528 GGATACTCGGGTCGGGTG 58.873 66.667 0.00 0.00 42.10 4.61
801 837 4.119862 CTGTGTAATACGGTTGGATGAGG 58.880 47.826 0.00 0.00 0.00 3.86
817 853 8.585881 GGCTATAAATAGATCTCCAACTGTGTA 58.414 37.037 0.00 0.00 32.05 2.90
818 854 7.445945 GGCTATAAATAGATCTCCAACTGTGT 58.554 38.462 0.00 0.00 32.05 3.72
819 855 6.876257 GGGCTATAAATAGATCTCCAACTGTG 59.124 42.308 0.00 0.00 32.05 3.66
820 856 6.558775 TGGGCTATAAATAGATCTCCAACTGT 59.441 38.462 0.00 0.00 32.05 3.55
823 859 7.051000 GGATGGGCTATAAATAGATCTCCAAC 58.949 42.308 0.00 0.00 32.05 3.77
831 867 5.613826 AGGGATGGATGGGCTATAAATAGA 58.386 41.667 1.08 0.00 32.05 1.98
843 879 5.013495 TGCTAAGATTAGAAGGGATGGATGG 59.987 44.000 3.77 0.00 32.47 3.51
844 880 6.119240 TGCTAAGATTAGAAGGGATGGATG 57.881 41.667 3.77 0.00 32.47 3.51
845 881 6.966637 ATGCTAAGATTAGAAGGGATGGAT 57.033 37.500 3.77 0.00 32.47 3.41
846 882 6.770286 AATGCTAAGATTAGAAGGGATGGA 57.230 37.500 3.77 0.00 32.47 3.41
868 904 7.936847 GGTGGATGTAGATGGAATGTAATGTAA 59.063 37.037 0.00 0.00 0.00 2.41
869 905 7.450074 GGTGGATGTAGATGGAATGTAATGTA 58.550 38.462 0.00 0.00 0.00 2.29
870 906 6.299141 GGTGGATGTAGATGGAATGTAATGT 58.701 40.000 0.00 0.00 0.00 2.71
871 907 5.409520 CGGTGGATGTAGATGGAATGTAATG 59.590 44.000 0.00 0.00 0.00 1.90
872 908 5.071788 ACGGTGGATGTAGATGGAATGTAAT 59.928 40.000 0.00 0.00 0.00 1.89
873 909 4.407621 ACGGTGGATGTAGATGGAATGTAA 59.592 41.667 0.00 0.00 0.00 2.41
893 929 4.152402 ACGAATTTTCAGACAAGATGACGG 59.848 41.667 0.00 0.00 0.00 4.79
898 934 5.934625 ACTGCTACGAATTTTCAGACAAGAT 59.065 36.000 0.00 0.00 0.00 2.40
903 943 3.433615 AGCACTGCTACGAATTTTCAGAC 59.566 43.478 0.21 0.00 36.99 3.51
919 959 1.001746 TCAGAGGAAGAAGCAGCACTG 59.998 52.381 0.00 0.00 0.00 3.66
920 960 1.346062 TCAGAGGAAGAAGCAGCACT 58.654 50.000 0.00 0.00 0.00 4.40
921 961 2.399916 ATCAGAGGAAGAAGCAGCAC 57.600 50.000 0.00 0.00 0.00 4.40
924 964 3.243367 CGGACTATCAGAGGAAGAAGCAG 60.243 52.174 0.00 0.00 0.00 4.24
926 966 2.952978 TCGGACTATCAGAGGAAGAAGC 59.047 50.000 0.00 0.00 0.00 3.86
931 971 3.117093 AGGGAATCGGACTATCAGAGGAA 60.117 47.826 0.00 0.00 0.00 3.36
932 972 2.447429 AGGGAATCGGACTATCAGAGGA 59.553 50.000 0.00 0.00 0.00 3.71
933 973 2.823154 GAGGGAATCGGACTATCAGAGG 59.177 54.545 0.00 0.00 0.00 3.69
955 995 2.539953 CGCTCTCAATACTGACCGAGTC 60.540 54.545 0.00 0.00 35.96 3.36
964 1004 1.202268 GGCACGTACGCTCTCAATACT 60.202 52.381 16.72 0.00 0.00 2.12
969 1009 1.372499 GTTGGCACGTACGCTCTCA 60.372 57.895 16.72 6.14 0.00 3.27
970 1010 0.942410 TTGTTGGCACGTACGCTCTC 60.942 55.000 16.72 3.37 0.00 3.20
971 1011 0.944311 CTTGTTGGCACGTACGCTCT 60.944 55.000 16.72 0.00 0.00 4.09
972 1012 0.942410 TCTTGTTGGCACGTACGCTC 60.942 55.000 16.72 7.01 0.00 5.03
975 1027 1.493772 TCTTCTTGTTGGCACGTACG 58.506 50.000 15.01 15.01 0.00 3.67
987 1039 8.400184 TGAGGATTGCCATATTATTCTTCTTG 57.600 34.615 0.00 0.00 36.29 3.02
993 1045 7.992754 ACTCTTGAGGATTGCCATATTATTC 57.007 36.000 2.55 0.00 36.29 1.75
994 1046 7.781693 ACAACTCTTGAGGATTGCCATATTATT 59.218 33.333 2.55 0.00 36.29 1.40
997 1049 5.513233 ACAACTCTTGAGGATTGCCATATT 58.487 37.500 2.55 0.00 36.29 1.28
1005 1057 3.665190 GACGGAACAACTCTTGAGGATT 58.335 45.455 2.55 0.00 0.00 3.01
1055 1107 1.103803 CAGGTCGATCTCTTCCGGAA 58.896 55.000 17.73 17.73 0.00 4.30
1092 1144 1.664017 CAGGCGCAGGATGATCTCG 60.664 63.158 10.83 0.00 39.69 4.04
1308 1369 2.094659 GTGCAGCGCGAAGAAGCTA 61.095 57.895 12.10 0.00 40.67 3.32
1309 1370 3.418068 GTGCAGCGCGAAGAAGCT 61.418 61.111 12.10 0.00 43.11 3.74
1815 5555 0.390472 CGAGGGACCAGACTTTGAGC 60.390 60.000 0.00 0.00 0.00 4.26
1855 5595 2.280797 GTGCTTCAGACGCCACCA 60.281 61.111 0.00 0.00 0.00 4.17
1863 5603 2.049156 CTCACGGCGTGCTTCAGA 60.049 61.111 33.59 15.49 32.98 3.27
1905 5651 3.934391 GAACCTCACCTCGCCACCG 62.934 68.421 0.00 0.00 0.00 4.94
1906 5652 2.047179 GAACCTCACCTCGCCACC 60.047 66.667 0.00 0.00 0.00 4.61
1907 5653 2.047179 GGAACCTCACCTCGCCAC 60.047 66.667 0.00 0.00 0.00 5.01
1908 5654 2.203788 AGGAACCTCACCTCGCCA 60.204 61.111 0.00 0.00 31.43 5.69
1909 5655 2.266055 CAGGAACCTCACCTCGCC 59.734 66.667 0.00 0.00 35.35 5.54
2132 5878 2.683742 CGCTCCATACCCACCTCAATTT 60.684 50.000 0.00 0.00 0.00 1.82
2165 5923 2.862674 TTCGATGGGTTAGGCACGGC 62.863 60.000 0.00 0.00 0.00 5.68
2189 5949 2.032549 CCACGGAGCGATTCATTCAATC 60.033 50.000 0.00 0.00 38.06 2.67
2192 5952 0.461870 CCCACGGAGCGATTCATTCA 60.462 55.000 0.00 0.00 0.00 2.57
2213 5973 1.298157 GCTGCGTCCAGTGTGCATTA 61.298 55.000 0.00 0.00 41.26 1.90
2218 5978 2.433145 ATCGCTGCGTCCAGTGTG 60.433 61.111 22.48 0.00 46.95 3.82
2228 5988 1.521457 TTGACCATCGGATCGCTGC 60.521 57.895 0.00 0.00 0.00 5.25
2234 5994 1.449601 GCCACGTTGACCATCGGAT 60.450 57.895 5.62 0.00 0.00 4.18
2244 6004 1.133025 GAAATGGATGGAGCCACGTTG 59.867 52.381 0.00 0.00 41.56 4.10
2327 6092 6.913873 TGTAGTGTGTAAGAAAAGTGTTCC 57.086 37.500 0.00 0.00 0.00 3.62
2338 6103 7.538678 GGAGCAATTTTGATTGTAGTGTGTAAG 59.461 37.037 0.00 0.00 34.21 2.34
2339 6104 7.013750 TGGAGCAATTTTGATTGTAGTGTGTAA 59.986 33.333 0.00 0.00 34.21 2.41
2340 6105 6.488344 TGGAGCAATTTTGATTGTAGTGTGTA 59.512 34.615 0.00 0.00 34.21 2.90
2341 6106 5.301551 TGGAGCAATTTTGATTGTAGTGTGT 59.698 36.000 0.00 0.00 34.21 3.72
2342 6107 5.771469 TGGAGCAATTTTGATTGTAGTGTG 58.229 37.500 0.00 0.00 34.21 3.82
2343 6108 6.594788 ATGGAGCAATTTTGATTGTAGTGT 57.405 33.333 0.00 0.00 34.21 3.55
2344 6109 7.485913 GTGTATGGAGCAATTTTGATTGTAGTG 59.514 37.037 0.00 0.00 34.21 2.74
2345 6110 7.394359 AGTGTATGGAGCAATTTTGATTGTAGT 59.606 33.333 0.00 0.00 34.21 2.73
2346 6111 7.765307 AGTGTATGGAGCAATTTTGATTGTAG 58.235 34.615 0.00 0.00 34.21 2.74
2347 6112 7.701539 AGTGTATGGAGCAATTTTGATTGTA 57.298 32.000 0.00 0.00 34.21 2.41
2348 6113 6.594788 AGTGTATGGAGCAATTTTGATTGT 57.405 33.333 0.00 0.00 34.21 2.71
2349 6114 7.063780 GGAAAGTGTATGGAGCAATTTTGATTG 59.936 37.037 0.00 0.00 34.85 2.67
2350 6115 7.038799 AGGAAAGTGTATGGAGCAATTTTGATT 60.039 33.333 0.00 0.00 34.85 2.57
2351 6116 6.438425 AGGAAAGTGTATGGAGCAATTTTGAT 59.562 34.615 0.00 0.00 34.85 2.57
2352 6117 5.774690 AGGAAAGTGTATGGAGCAATTTTGA 59.225 36.000 0.00 0.00 34.85 2.69
2353 6118 6.029346 AGGAAAGTGTATGGAGCAATTTTG 57.971 37.500 0.00 0.00 34.85 2.44
2354 6119 6.012745 AGAGGAAAGTGTATGGAGCAATTTT 58.987 36.000 0.00 0.00 34.85 1.82
2355 6120 5.574188 AGAGGAAAGTGTATGGAGCAATTT 58.426 37.500 0.00 0.00 36.94 1.82
2356 6121 5.184892 AGAGGAAAGTGTATGGAGCAATT 57.815 39.130 0.00 0.00 0.00 2.32
2357 6122 4.851639 AGAGGAAAGTGTATGGAGCAAT 57.148 40.909 0.00 0.00 0.00 3.56
2358 6123 5.957771 ATAGAGGAAAGTGTATGGAGCAA 57.042 39.130 0.00 0.00 0.00 3.91
2359 6124 7.055667 CTTATAGAGGAAAGTGTATGGAGCA 57.944 40.000 0.00 0.00 0.00 4.26
2374 6139 2.093128 ACCAAACACGCCCTTATAGAGG 60.093 50.000 0.00 0.00 45.86 3.69
2375 6140 3.261981 ACCAAACACGCCCTTATAGAG 57.738 47.619 0.00 0.00 0.00 2.43
2413 6178 2.967599 AGAAGTGTATGCGATGCAGA 57.032 45.000 0.00 0.00 43.65 4.26
2433 6198 6.049149 GCATTTGTATAGCCAGACTGAGTAA 58.951 40.000 3.32 0.00 0.00 2.24
2450 6215 1.345089 TGCATTTGAGGCTGCATTTGT 59.655 42.857 0.50 0.00 43.11 2.83
2578 6352 3.022557 ACATCAGGCCTTGCATACAAT 57.977 42.857 0.00 0.00 34.61 2.71
2599 6373 2.269940 ACTAGCCAAAGAGGTCACCAT 58.730 47.619 0.00 0.00 40.61 3.55
2604 6378 2.038557 TCACCAACTAGCCAAAGAGGTC 59.961 50.000 0.00 0.00 40.61 3.85
2631 6405 2.280797 GCTGCCGAAGTGTGGTGA 60.281 61.111 0.00 0.00 0.00 4.02
2750 6525 4.083696 TCGAGCGTACTATCGAATTATGCA 60.084 41.667 14.56 0.00 44.36 3.96
2904 6679 7.703058 TTAGATCAAGATCGGCTACATGATA 57.297 36.000 0.00 0.00 42.48 2.15
2906 6681 6.209391 TCATTAGATCAAGATCGGCTACATGA 59.791 38.462 0.00 5.15 42.48 3.07
3000 6777 1.078918 CAACATCGGCTGCTCCTGA 60.079 57.895 0.00 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.