Multiple sequence alignment - TraesCS7D01G257600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G257600 chr7D 100.000 3055 0 0 1 3055 233019411 233016357 0.000000e+00 5642.0
1 TraesCS7D01G257600 chr7D 100.000 1114 0 0 3566 4679 233015846 233014733 0.000000e+00 2058.0
2 TraesCS7D01G257600 chr7D 97.122 139 4 0 4541 4679 551931986 551931848 7.830000e-58 235.0
3 TraesCS7D01G257600 chr7D 92.308 117 9 0 4429 4545 551939224 551939108 2.900000e-37 167.0
4 TraesCS7D01G257600 chr7B 92.788 2468 98 30 492 2939 204062451 204060044 0.000000e+00 3498.0
5 TraesCS7D01G257600 chr7B 90.118 425 38 4 29 451 204063886 204063464 2.460000e-152 549.0
6 TraesCS7D01G257600 chr7B 91.451 386 27 4 3567 3952 204059764 204059385 4.150000e-145 525.0
7 TraesCS7D01G257600 chr7A 96.325 1823 52 10 736 2552 245931622 245933435 0.000000e+00 2981.0
8 TraesCS7D01G257600 chr7A 88.961 616 48 13 29 632 245928955 245929562 0.000000e+00 743.0
9 TraesCS7D01G257600 chr7A 92.531 482 18 7 2561 3036 245934141 245934610 0.000000e+00 675.0
10 TraesCS7D01G257600 chr7A 87.282 401 27 9 3566 3964 245935739 245936117 2.000000e-118 436.0
11 TraesCS7D01G257600 chr7A 80.579 242 41 5 4438 4676 249584911 249585149 1.030000e-41 182.0
12 TraesCS7D01G257600 chr7A 93.846 65 4 0 4114 4178 245936391 245936455 1.070000e-16 99.0
13 TraesCS7D01G257600 chrUn 89.891 643 41 6 492 1120 391493346 391492714 0.000000e+00 806.0
14 TraesCS7D01G257600 chrUn 89.752 644 41 7 492 1120 391403509 391402876 0.000000e+00 800.0
15 TraesCS7D01G257600 chrUn 90.123 567 33 5 567 1120 217707982 217708538 0.000000e+00 715.0
16 TraesCS7D01G257600 chrUn 91.451 386 27 4 3567 3952 217710219 217710598 4.150000e-145 525.0
17 TraesCS7D01G257600 chrUn 95.122 41 0 2 3952 3990 35299492 35299452 3.910000e-06 63.9
18 TraesCS7D01G257600 chrUn 95.122 41 0 2 3952 3990 229349332 229349292 3.910000e-06 63.9
19 TraesCS7D01G257600 chr3D 90.438 251 13 2 4429 4679 463694558 463694319 2.100000e-83 320.0
20 TraesCS7D01G257600 chr3D 100.000 38 0 0 4642 4679 531684477 531684514 2.340000e-08 71.3
21 TraesCS7D01G257600 chr3D 100.000 37 0 0 4642 4678 42255185 42255149 8.400000e-08 69.4
22 TraesCS7D01G257600 chr3D 94.872 39 0 2 3953 3989 5630659 5630621 5.060000e-05 60.2
23 TraesCS7D01G257600 chr3D 88.000 50 3 3 3955 4001 464803872 464803823 6.540000e-04 56.5
24 TraesCS7D01G257600 chr4A 90.196 204 16 1 4429 4632 590102316 590102117 3.590000e-66 263.0
25 TraesCS7D01G257600 chr4A 100.000 28 0 0 3835 3862 636682964 636682991 8.000000e-03 52.8
26 TraesCS7D01G257600 chr3B 80.833 240 42 4 4438 4675 414181253 414181016 8.000000e-43 185.0
27 TraesCS7D01G257600 chr3B 100.000 29 0 0 3 31 817612875 817612847 2.000000e-03 54.7
28 TraesCS7D01G257600 chr6A 81.385 231 38 5 4448 4676 64571732 64571959 2.880000e-42 183.0
29 TraesCS7D01G257600 chr5B 95.122 41 0 2 3952 3990 62980433 62980473 3.910000e-06 63.9
30 TraesCS7D01G257600 chr4B 95.122 41 0 2 3951 3989 135215423 135215463 3.910000e-06 63.9
31 TraesCS7D01G257600 chr3A 95.122 41 0 2 3952 3990 564350232 564350192 3.910000e-06 63.9
32 TraesCS7D01G257600 chr1A 95.000 40 0 2 3952 3989 12556226 12556265 1.410000e-05 62.1
33 TraesCS7D01G257600 chr1A 95.000 40 0 2 3952 3989 363670939 363670978 1.410000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G257600 chr7D 233014733 233019411 4678 True 3850.0 5642 100.000000 1 4679 2 chr7D.!!$R3 4678
1 TraesCS7D01G257600 chr7B 204059385 204063886 4501 True 1524.0 3498 91.452333 29 3952 3 chr7B.!!$R1 3923
2 TraesCS7D01G257600 chr7A 245928955 245936455 7500 False 986.8 2981 91.789000 29 4178 5 chr7A.!!$F2 4149
3 TraesCS7D01G257600 chrUn 391492714 391493346 632 True 806.0 806 89.891000 492 1120 1 chrUn.!!$R4 628
4 TraesCS7D01G257600 chrUn 391402876 391403509 633 True 800.0 800 89.752000 492 1120 1 chrUn.!!$R3 628
5 TraesCS7D01G257600 chrUn 217707982 217710598 2616 False 620.0 715 90.787000 567 3952 2 chrUn.!!$F1 3385

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
730 3721 0.108963 TGTTAGTGTTCCCAACCCGG 59.891 55.000 0.00 0.0 0.00 5.73 F
1015 4008 0.909610 AGAAATGGCGTCCTCCTCCA 60.910 55.000 0.00 0.0 0.00 3.86 F
1089 4082 1.977544 CTCACGTTCCCCTCTCCGT 60.978 63.158 0.00 0.0 0.00 4.69 F
2279 5273 2.625823 CGGTGGCAAGCCGTTGAAT 61.626 57.895 8.28 0.0 43.84 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1847 4841 0.169009 GCATTTGGTCGAGCAGGTTC 59.831 55.0 17.81 5.45 0.00 3.62 R
2264 5258 0.250684 TCTCATTCAACGGCTTGCCA 60.251 50.0 12.45 0.00 0.00 4.92 R
2744 6446 1.960417 TCAACGTTGAGGCAATGTGA 58.040 45.0 26.53 0.56 41.92 3.58 R
4190 9078 0.096976 CAATTAGCAACCGCCAGTCG 59.903 55.0 0.00 0.00 39.83 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 71 4.864247 ACACAATCACTTTTCAAACTGTGC 59.136 37.500 0.00 0.00 37.11 4.57
71 72 4.863689 CACAATCACTTTTCAAACTGTGCA 59.136 37.500 0.00 0.00 0.00 4.57
72 73 4.864247 ACAATCACTTTTCAAACTGTGCAC 59.136 37.500 10.75 10.75 0.00 4.57
87 88 9.848172 CAAACTGTGCACACTTTTTAAAATATC 57.152 29.630 17.42 0.00 0.00 1.63
91 92 6.638873 TGTGCACACTTTTTAAAATATCCACG 59.361 34.615 17.42 0.00 0.00 4.94
381 386 3.042887 GACAAACAAACAGGCGATGAAC 58.957 45.455 0.00 0.00 0.00 3.18
447 452 2.433318 GGCGAGCCTGTGTCTGTC 60.433 66.667 6.90 0.00 0.00 3.51
448 453 2.433318 GCGAGCCTGTGTCTGTCC 60.433 66.667 0.00 0.00 0.00 4.02
451 456 3.302347 GAGCCTGTGTCTGTCCCCG 62.302 68.421 0.00 0.00 0.00 5.73
483 603 4.748102 TGTTTAAATCGCCCTCATATCGAC 59.252 41.667 0.00 0.00 34.92 4.20
497 1476 2.225068 ATCGACCCGAATGATGTCAC 57.775 50.000 0.00 0.00 39.99 3.67
515 1494 4.276431 TGTCACGTAACTGAGACATGTACA 59.724 41.667 0.00 0.00 35.08 2.90
518 1497 6.468319 GTCACGTAACTGAGACATGTACATAC 59.532 42.308 8.32 6.10 30.93 2.39
542 1521 8.293114 ACAAACATGGTTTCGAATCAATAAAC 57.707 30.769 0.00 0.00 33.37 2.01
547 1526 5.074115 TGGTTTCGAATCAATAAACTGGGT 58.926 37.500 0.00 0.00 34.34 4.51
558 1537 6.180472 TCAATAAACTGGGTGAGATTTCTCC 58.820 40.000 5.17 0.00 42.20 3.71
562 1541 4.026356 ACTGGGTGAGATTTCTCCAAAG 57.974 45.455 6.67 5.91 42.20 2.77
689 3680 5.643348 CACAAGGAATGATACTGTTAGTGCA 59.357 40.000 0.00 0.00 0.00 4.57
708 3699 4.776322 TTCGGCTCACATGCGGGG 62.776 66.667 0.00 0.00 34.63 5.73
730 3721 0.108963 TGTTAGTGTTCCCAACCCGG 59.891 55.000 0.00 0.00 0.00 5.73
961 3954 7.616542 TCCATTCCATCTCAGATCAAAATCAAA 59.383 33.333 0.00 0.00 34.07 2.69
989 3982 4.998671 TCAACATTTGGCAAGAGAACAA 57.001 36.364 0.00 0.00 0.00 2.83
993 3986 3.380004 ACATTTGGCAAGAGAACAAACGA 59.620 39.130 0.00 0.00 36.98 3.85
1015 4008 0.909610 AGAAATGGCGTCCTCCTCCA 60.910 55.000 0.00 0.00 0.00 3.86
1048 4041 4.761058 TCCTCCTCGCCGCCTTCT 62.761 66.667 0.00 0.00 0.00 2.85
1089 4082 1.977544 CTCACGTTCCCCTCTCCGT 60.978 63.158 0.00 0.00 0.00 4.69
1132 4126 7.824779 ACTTGATTAATTAGTTCCTGACCAGTC 59.175 37.037 0.00 0.00 0.00 3.51
2279 5273 2.625823 CGGTGGCAAGCCGTTGAAT 61.626 57.895 8.28 0.00 43.84 2.57
2546 5540 7.569226 CGGAAATCTTTACAAATTTGGTGCTTG 60.569 37.037 21.74 7.33 0.00 4.01
2547 5541 6.544038 AATCTTTACAAATTTGGTGCTTGC 57.456 33.333 21.74 0.00 0.00 4.01
2549 5543 6.398234 TCTTTACAAATTTGGTGCTTGCTA 57.602 33.333 21.74 0.35 0.00 3.49
2550 5544 6.446318 TCTTTACAAATTTGGTGCTTGCTAG 58.554 36.000 21.74 6.38 0.00 3.42
2706 6405 9.780186 GATACTAGCTGATGGGTTTAATAGTTT 57.220 33.333 0.00 0.00 0.00 2.66
2707 6406 9.780186 ATACTAGCTGATGGGTTTAATAGTTTC 57.220 33.333 0.00 0.00 0.00 2.78
2790 6492 3.548818 GCTAAACATTAGGCTCGCCATTG 60.549 47.826 11.02 6.93 38.92 2.82
2791 6493 2.128771 AACATTAGGCTCGCCATTGT 57.871 45.000 11.02 7.54 38.92 2.71
2792 6494 3.275617 AACATTAGGCTCGCCATTGTA 57.724 42.857 11.02 0.00 38.92 2.41
2793 6495 2.838736 ACATTAGGCTCGCCATTGTAG 58.161 47.619 11.02 0.00 38.92 2.74
2794 6496 2.434336 ACATTAGGCTCGCCATTGTAGA 59.566 45.455 11.02 0.00 38.92 2.59
2873 6575 2.872245 CACTTCACCTCGAAACATGTGT 59.128 45.455 0.00 0.00 31.71 3.72
3594 8348 8.846943 TTTAGAGACTAATGATTTGTTGCTCA 57.153 30.769 9.70 0.00 0.00 4.26
3607 8361 0.469494 TTGCTCACACCTCAGCTCAA 59.531 50.000 0.00 0.00 36.53 3.02
3617 8371 4.223700 ACACCTCAGCTCAATGTTGATCTA 59.776 41.667 0.00 0.00 35.40 1.98
3623 8377 4.510711 CAGCTCAATGTTGATCTATCGCTT 59.489 41.667 0.00 0.00 36.46 4.68
3766 8521 5.365619 CCGTAATGCCCTTTTAGTCTGTAT 58.634 41.667 0.00 0.00 0.00 2.29
3788 8547 3.996032 GCAGTCAGCACTTATTTTCTCG 58.004 45.455 0.00 0.00 44.79 4.04
3810 8569 4.443725 CGCAGCTTCAGTGATGTCTATTAG 59.556 45.833 7.76 0.00 0.00 1.73
3820 8579 8.035394 TCAGTGATGTCTATTAGGTTGTCTTTC 58.965 37.037 0.00 0.00 0.00 2.62
3943 8702 5.378230 TGGTTACTCGATTACTCCCTCTA 57.622 43.478 0.00 0.00 0.00 2.43
3945 8704 5.768662 TGGTTACTCGATTACTCCCTCTATG 59.231 44.000 0.00 0.00 0.00 2.23
3952 8711 7.013846 ACTCGATTACTCCCTCTATGAAGAAAG 59.986 40.741 0.00 0.00 0.00 2.62
3957 8742 9.661954 ATTACTCCCTCTATGAAGAAAGTGATA 57.338 33.333 0.00 0.00 0.00 2.15
3963 8748 9.197694 CCCTCTATGAAGAAAGTGATATAAACG 57.802 37.037 0.00 0.00 0.00 3.60
4001 8789 5.705609 ACGAGGAGTACAAAATTGCATTT 57.294 34.783 0.00 0.00 0.00 2.32
4003 8791 6.608610 ACGAGGAGTACAAAATTGCATTTAC 58.391 36.000 0.00 0.00 0.00 2.01
4010 8798 8.825667 AGTACAAAATTGCATTTACGGATTTT 57.174 26.923 0.00 0.00 31.99 1.82
4051 8839 5.534278 TGCTTGTGGACATTGAGATTGTTAA 59.466 36.000 0.00 0.00 0.00 2.01
4053 8841 6.294176 GCTTGTGGACATTGAGATTGTTAAGT 60.294 38.462 0.00 0.00 0.00 2.24
4058 8846 7.172532 GTGGACATTGAGATTGTTAAGTGTGTA 59.827 37.037 0.00 0.00 0.00 2.90
4061 8880 8.902540 ACATTGAGATTGTTAAGTGTGTAAGA 57.097 30.769 0.00 0.00 0.00 2.10
4063 8882 7.962964 TTGAGATTGTTAAGTGTGTAAGAGG 57.037 36.000 0.00 0.00 0.00 3.69
4086 8905 4.599036 AGGGACTGTGGGTTTTGC 57.401 55.556 0.00 0.00 37.18 3.68
4089 8908 1.363807 GGACTGTGGGTTTTGCTGC 59.636 57.895 0.00 0.00 0.00 5.25
4090 8909 1.008538 GACTGTGGGTTTTGCTGCG 60.009 57.895 0.00 0.00 0.00 5.18
4093 8912 3.605664 GTGGGTTTTGCTGCGGCT 61.606 61.111 20.27 0.00 39.59 5.52
4094 8913 2.114199 TGGGTTTTGCTGCGGCTA 59.886 55.556 20.27 8.65 39.59 3.93
4095 8914 1.971167 TGGGTTTTGCTGCGGCTAG 60.971 57.895 20.27 0.00 39.59 3.42
4096 8915 2.700773 GGGTTTTGCTGCGGCTAGG 61.701 63.158 20.27 0.00 39.59 3.02
4098 8917 1.502190 GTTTTGCTGCGGCTAGGAC 59.498 57.895 20.27 10.11 39.59 3.85
4099 8918 1.674322 TTTTGCTGCGGCTAGGACC 60.674 57.895 20.27 0.00 39.59 4.46
4100 8919 2.404566 TTTTGCTGCGGCTAGGACCA 62.405 55.000 20.27 0.00 39.59 4.02
4101 8920 3.605749 TTGCTGCGGCTAGGACCAC 62.606 63.158 20.27 0.00 39.59 4.16
4102 8921 4.840005 GCTGCGGCTAGGACCACC 62.840 72.222 11.21 0.00 35.22 4.61
4106 8925 3.155167 CGGCTAGGACCACCCTCC 61.155 72.222 0.00 0.00 43.31 4.30
4107 8926 2.040606 GGCTAGGACCACCCTCCA 59.959 66.667 0.00 0.00 43.31 3.86
4108 8927 2.368011 GGCTAGGACCACCCTCCAC 61.368 68.421 0.00 0.00 43.31 4.02
4109 8928 2.368011 GCTAGGACCACCCTCCACC 61.368 68.421 0.00 0.00 43.31 4.61
4110 8929 1.080354 CTAGGACCACCCTCCACCA 59.920 63.158 0.00 0.00 43.31 4.17
4111 8930 0.978146 CTAGGACCACCCTCCACCAG 60.978 65.000 0.00 0.00 43.31 4.00
4135 9023 3.005554 CAGGTGTCCTTGTAGCATTCAG 58.994 50.000 0.00 0.00 0.00 3.02
4146 9034 6.348050 CCTTGTAGCATTCAGACTTCACTTTC 60.348 42.308 0.00 0.00 0.00 2.62
4147 9035 5.610398 TGTAGCATTCAGACTTCACTTTCA 58.390 37.500 0.00 0.00 0.00 2.69
4178 9066 4.047883 AGGGAGAGGGCAAAACAGTATAT 58.952 43.478 0.00 0.00 0.00 0.86
4179 9067 5.224441 AGGGAGAGGGCAAAACAGTATATA 58.776 41.667 0.00 0.00 0.00 0.86
4180 9068 5.852250 AGGGAGAGGGCAAAACAGTATATAT 59.148 40.000 0.00 0.00 0.00 0.86
4181 9069 6.013293 AGGGAGAGGGCAAAACAGTATATATC 60.013 42.308 0.00 0.00 0.00 1.63
4182 9070 5.869888 GGAGAGGGCAAAACAGTATATATCG 59.130 44.000 0.00 0.00 0.00 2.92
4183 9071 5.238583 AGAGGGCAAAACAGTATATATCGC 58.761 41.667 0.00 0.00 0.00 4.58
4184 9072 5.012148 AGAGGGCAAAACAGTATATATCGCT 59.988 40.000 0.00 0.00 0.00 4.93
4185 9073 5.238583 AGGGCAAAACAGTATATATCGCTC 58.761 41.667 0.00 0.00 0.00 5.03
4186 9074 5.012148 AGGGCAAAACAGTATATATCGCTCT 59.988 40.000 0.00 0.00 0.00 4.09
4187 9075 6.210784 AGGGCAAAACAGTATATATCGCTCTA 59.789 38.462 0.00 0.00 0.00 2.43
4188 9076 7.042335 GGGCAAAACAGTATATATCGCTCTAT 58.958 38.462 0.00 0.00 0.00 1.98
4189 9077 7.010552 GGGCAAAACAGTATATATCGCTCTATG 59.989 40.741 0.00 0.00 0.00 2.23
4190 9078 7.394872 GCAAAACAGTATATATCGCTCTATGC 58.605 38.462 0.00 0.00 38.57 3.14
4207 9095 4.201951 CGACTGGCGGTTGCTAAT 57.798 55.556 0.00 0.00 42.25 1.73
4208 9096 2.466867 CGACTGGCGGTTGCTAATT 58.533 52.632 0.00 0.00 42.25 1.40
4209 9097 0.096976 CGACTGGCGGTTGCTAATTG 59.903 55.000 0.00 0.00 42.25 2.32
4210 9098 0.179163 GACTGGCGGTTGCTAATTGC 60.179 55.000 0.00 0.00 42.25 3.56
4211 9099 0.609131 ACTGGCGGTTGCTAATTGCT 60.609 50.000 0.00 0.00 43.37 3.91
4212 9100 1.339631 ACTGGCGGTTGCTAATTGCTA 60.340 47.619 0.00 0.00 43.37 3.49
4213 9101 1.949525 CTGGCGGTTGCTAATTGCTAT 59.050 47.619 0.00 0.00 43.37 2.97
4214 9102 3.138304 CTGGCGGTTGCTAATTGCTATA 58.862 45.455 0.00 0.00 43.37 1.31
4215 9103 2.875933 TGGCGGTTGCTAATTGCTATAC 59.124 45.455 0.00 0.00 43.37 1.47
4216 9104 2.875933 GGCGGTTGCTAATTGCTATACA 59.124 45.455 0.00 0.00 43.37 2.29
4217 9105 3.303791 GGCGGTTGCTAATTGCTATACAC 60.304 47.826 0.00 0.00 43.37 2.90
4218 9106 3.303791 GCGGTTGCTAATTGCTATACACC 60.304 47.826 0.00 0.00 43.37 4.16
4219 9107 3.059868 CGGTTGCTAATTGCTATACACCG 60.060 47.826 0.00 0.00 43.37 4.94
4220 9108 3.303791 GGTTGCTAATTGCTATACACCGC 60.304 47.826 0.00 0.00 43.37 5.68
4221 9109 3.469008 TGCTAATTGCTATACACCGCT 57.531 42.857 0.00 0.00 43.37 5.52
4222 9110 3.390135 TGCTAATTGCTATACACCGCTC 58.610 45.455 0.00 0.00 43.37 5.03
4223 9111 3.181470 TGCTAATTGCTATACACCGCTCA 60.181 43.478 0.00 0.00 43.37 4.26
4224 9112 3.184581 GCTAATTGCTATACACCGCTCAC 59.815 47.826 0.00 0.00 38.95 3.51
4225 9113 3.543680 AATTGCTATACACCGCTCACT 57.456 42.857 0.00 0.00 0.00 3.41
4226 9114 2.293677 TTGCTATACACCGCTCACTG 57.706 50.000 0.00 0.00 0.00 3.66
4227 9115 0.179111 TGCTATACACCGCTCACTGC 60.179 55.000 0.00 0.00 38.57 4.40
4236 9124 2.872925 GCTCACTGCGCGCAAATG 60.873 61.111 35.50 32.13 0.00 2.32
4237 9125 2.862436 CTCACTGCGCGCAAATGA 59.138 55.556 33.17 33.17 0.00 2.57
4238 9126 1.426621 CTCACTGCGCGCAAATGAT 59.573 52.632 34.61 18.47 0.00 2.45
4239 9127 0.588233 CTCACTGCGCGCAAATGATC 60.588 55.000 34.61 8.44 0.00 2.92
4240 9128 1.584483 CACTGCGCGCAAATGATCC 60.584 57.895 35.50 0.68 0.00 3.36
4241 9129 2.039974 ACTGCGCGCAAATGATCCA 61.040 52.632 35.50 8.69 0.00 3.41
4242 9130 1.137194 CTGCGCGCAAATGATCCAA 59.863 52.632 35.50 7.85 0.00 3.53
4243 9131 1.135699 CTGCGCGCAAATGATCCAAC 61.136 55.000 35.50 0.00 0.00 3.77
4244 9132 2.216920 GCGCGCAAATGATCCAACG 61.217 57.895 29.10 0.00 0.00 4.10
4245 9133 2.216920 CGCGCAAATGATCCAACGC 61.217 57.895 8.75 0.00 42.69 4.84
4246 9134 1.873572 GCGCAAATGATCCAACGCC 60.874 57.895 0.30 0.00 40.43 5.68
4247 9135 1.802636 CGCAAATGATCCAACGCCT 59.197 52.632 0.00 0.00 0.00 5.52
4248 9136 0.523968 CGCAAATGATCCAACGCCTG 60.524 55.000 0.00 0.00 0.00 4.85
4249 9137 0.803380 GCAAATGATCCAACGCCTGC 60.803 55.000 0.00 0.00 0.00 4.85
4250 9138 0.527113 CAAATGATCCAACGCCTGCA 59.473 50.000 0.00 0.00 0.00 4.41
4251 9139 0.813184 AAATGATCCAACGCCTGCAG 59.187 50.000 6.78 6.78 0.00 4.41
4252 9140 1.660560 AATGATCCAACGCCTGCAGC 61.661 55.000 8.66 2.87 38.52 5.25
4262 9150 3.423154 CCTGCAGCGAAACCCGAC 61.423 66.667 8.66 0.00 41.76 4.79
4263 9151 3.777925 CTGCAGCGAAACCCGACG 61.778 66.667 0.00 0.00 41.76 5.12
4264 9152 4.595538 TGCAGCGAAACCCGACGT 62.596 61.111 0.00 0.00 41.76 4.34
4265 9153 3.774702 GCAGCGAAACCCGACGTC 61.775 66.667 5.18 5.18 41.76 4.34
4266 9154 2.355363 CAGCGAAACCCGACGTCA 60.355 61.111 17.16 0.00 41.76 4.35
4267 9155 2.049433 AGCGAAACCCGACGTCAG 60.049 61.111 17.16 8.75 41.76 3.51
4268 9156 3.774702 GCGAAACCCGACGTCAGC 61.775 66.667 17.16 5.11 41.76 4.26
4269 9157 3.467119 CGAAACCCGACGTCAGCG 61.467 66.667 17.16 1.75 41.76 5.18
4308 9196 7.531280 TTTTTCTTTTGATTCATTTCGTGCA 57.469 28.000 0.00 0.00 0.00 4.57
4309 9197 7.531280 TTTTCTTTTGATTCATTTCGTGCAA 57.469 28.000 0.00 0.00 0.00 4.08
4310 9198 7.712264 TTTCTTTTGATTCATTTCGTGCAAT 57.288 28.000 0.00 0.00 0.00 3.56
4311 9199 7.712264 TTCTTTTGATTCATTTCGTGCAATT 57.288 28.000 0.00 0.00 0.00 2.32
4312 9200 7.712264 TCTTTTGATTCATTTCGTGCAATTT 57.288 28.000 0.00 0.00 0.00 1.82
4313 9201 8.809159 TCTTTTGATTCATTTCGTGCAATTTA 57.191 26.923 0.00 0.00 0.00 1.40
4314 9202 9.421806 TCTTTTGATTCATTTCGTGCAATTTAT 57.578 25.926 0.00 0.00 0.00 1.40
4315 9203 9.679596 CTTTTGATTCATTTCGTGCAATTTATC 57.320 29.630 0.00 0.00 0.00 1.75
4316 9204 8.754230 TTTGATTCATTTCGTGCAATTTATCA 57.246 26.923 0.00 0.00 0.00 2.15
4317 9205 7.974243 TGATTCATTTCGTGCAATTTATCAG 57.026 32.000 0.00 0.00 0.00 2.90
4318 9206 7.537715 TGATTCATTTCGTGCAATTTATCAGT 58.462 30.769 0.00 0.00 0.00 3.41
4319 9207 8.028354 TGATTCATTTCGTGCAATTTATCAGTT 58.972 29.630 0.00 0.00 0.00 3.16
4320 9208 8.761575 ATTCATTTCGTGCAATTTATCAGTTT 57.238 26.923 0.00 0.00 0.00 2.66
4321 9209 9.853555 ATTCATTTCGTGCAATTTATCAGTTTA 57.146 25.926 0.00 0.00 0.00 2.01
4322 9210 9.853555 TTCATTTCGTGCAATTTATCAGTTTAT 57.146 25.926 0.00 0.00 0.00 1.40
4323 9211 9.853555 TCATTTCGTGCAATTTATCAGTTTATT 57.146 25.926 0.00 0.00 0.00 1.40
4350 9238 7.842887 TTTGTAACCAGGTTTTATTTAGCCT 57.157 32.000 11.02 0.00 0.00 4.58
4351 9239 7.842887 TTGTAACCAGGTTTTATTTAGCCTT 57.157 32.000 11.02 0.00 0.00 4.35
4352 9240 7.842887 TGTAACCAGGTTTTATTTAGCCTTT 57.157 32.000 11.02 0.00 0.00 3.11
4353 9241 8.252624 TGTAACCAGGTTTTATTTAGCCTTTT 57.747 30.769 11.02 0.00 0.00 2.27
4354 9242 8.145122 TGTAACCAGGTTTTATTTAGCCTTTTG 58.855 33.333 11.02 0.00 0.00 2.44
4355 9243 6.740944 ACCAGGTTTTATTTAGCCTTTTGT 57.259 33.333 0.00 0.00 0.00 2.83
4356 9244 6.521162 ACCAGGTTTTATTTAGCCTTTTGTG 58.479 36.000 0.00 0.00 0.00 3.33
4357 9245 6.099125 ACCAGGTTTTATTTAGCCTTTTGTGT 59.901 34.615 0.00 0.00 0.00 3.72
4358 9246 6.989759 CCAGGTTTTATTTAGCCTTTTGTGTT 59.010 34.615 0.00 0.00 0.00 3.32
4359 9247 7.497579 CCAGGTTTTATTTAGCCTTTTGTGTTT 59.502 33.333 0.00 0.00 0.00 2.83
4360 9248 8.888716 CAGGTTTTATTTAGCCTTTTGTGTTTT 58.111 29.630 0.00 0.00 0.00 2.43
4368 9256 9.884636 ATTTAGCCTTTTGTGTTTTATTATCCC 57.115 29.630 0.00 0.00 0.00 3.85
4369 9257 8.658840 TTAGCCTTTTGTGTTTTATTATCCCT 57.341 30.769 0.00 0.00 0.00 4.20
4370 9258 7.553504 AGCCTTTTGTGTTTTATTATCCCTT 57.446 32.000 0.00 0.00 0.00 3.95
4371 9259 7.611770 AGCCTTTTGTGTTTTATTATCCCTTC 58.388 34.615 0.00 0.00 0.00 3.46
4372 9260 7.454694 AGCCTTTTGTGTTTTATTATCCCTTCT 59.545 33.333 0.00 0.00 0.00 2.85
4373 9261 7.545615 GCCTTTTGTGTTTTATTATCCCTTCTG 59.454 37.037 0.00 0.00 0.00 3.02
4374 9262 8.585018 CCTTTTGTGTTTTATTATCCCTTCTGT 58.415 33.333 0.00 0.00 0.00 3.41
4375 9263 9.981114 CTTTTGTGTTTTATTATCCCTTCTGTT 57.019 29.630 0.00 0.00 0.00 3.16
4378 9266 9.974980 TTGTGTTTTATTATCCCTTCTGTTTTC 57.025 29.630 0.00 0.00 0.00 2.29
4379 9267 9.362151 TGTGTTTTATTATCCCTTCTGTTTTCT 57.638 29.630 0.00 0.00 0.00 2.52
4431 9319 7.807977 ATAAATTGAAATACATGAGTCGGCT 57.192 32.000 0.00 0.00 0.00 5.52
4432 9320 8.902540 ATAAATTGAAATACATGAGTCGGCTA 57.097 30.769 0.00 0.00 0.00 3.93
4433 9321 6.604735 AATTGAAATACATGAGTCGGCTAC 57.395 37.500 0.00 0.00 0.00 3.58
4434 9322 4.729227 TGAAATACATGAGTCGGCTACA 57.271 40.909 0.00 0.00 0.00 2.74
4435 9323 5.276461 TGAAATACATGAGTCGGCTACAT 57.724 39.130 0.00 0.00 0.00 2.29
4436 9324 5.289595 TGAAATACATGAGTCGGCTACATC 58.710 41.667 0.00 0.00 0.00 3.06
4437 9325 3.944055 ATACATGAGTCGGCTACATCC 57.056 47.619 0.00 0.00 0.00 3.51
4438 9326 0.753262 ACATGAGTCGGCTACATCCC 59.247 55.000 0.00 0.00 0.00 3.85
4439 9327 0.034059 CATGAGTCGGCTACATCCCC 59.966 60.000 0.00 0.00 0.00 4.81
4440 9328 1.464376 ATGAGTCGGCTACATCCCCG 61.464 60.000 0.00 0.00 45.64 5.73
4441 9329 3.501458 GAGTCGGCTACATCCCCGC 62.501 68.421 0.00 0.00 44.01 6.13
4442 9330 4.944372 GTCGGCTACATCCCCGCG 62.944 72.222 0.00 0.00 44.01 6.46
4445 9333 4.910585 GGCTACATCCCCGCGGTG 62.911 72.222 26.12 18.66 0.00 4.94
4446 9334 4.910585 GCTACATCCCCGCGGTGG 62.911 72.222 26.12 24.01 37.55 4.61
4447 9335 3.151710 CTACATCCCCGCGGTGGA 61.152 66.667 29.71 29.71 42.00 4.02
4448 9336 2.445085 TACATCCCCGCGGTGGAT 60.445 61.111 30.99 30.99 43.46 3.41
4449 9337 2.436087 CTACATCCCCGCGGTGGATC 62.436 65.000 32.74 0.00 40.68 3.36
4450 9338 2.939760 TACATCCCCGCGGTGGATCT 62.940 60.000 32.74 26.71 40.68 2.75
4451 9339 3.550431 ATCCCCGCGGTGGATCTG 61.550 66.667 30.99 13.96 38.20 2.90
4463 9351 4.521062 GATCTGGCCTGCGCGTCT 62.521 66.667 8.43 0.00 35.02 4.18
4464 9352 4.827087 ATCTGGCCTGCGCGTCTG 62.827 66.667 8.43 4.17 35.02 3.51
4471 9359 4.498520 CTGCGCGTCTGGATCCGT 62.499 66.667 8.43 0.00 0.00 4.69
4472 9360 4.794439 TGCGCGTCTGGATCCGTG 62.794 66.667 8.43 2.52 37.62 4.94
4475 9363 4.796231 GCGTCTGGATCCGTGCGT 62.796 66.667 18.36 0.00 0.00 5.24
4476 9364 2.880879 CGTCTGGATCCGTGCGTG 60.881 66.667 7.39 0.00 0.00 5.34
4477 9365 3.188786 GTCTGGATCCGTGCGTGC 61.189 66.667 7.39 0.00 0.00 5.34
4478 9366 4.794439 TCTGGATCCGTGCGTGCG 62.794 66.667 7.39 0.00 0.00 5.34
4521 9409 4.394712 CTGGTGGCTCGTGGGTCC 62.395 72.222 0.00 0.00 0.00 4.46
4553 9441 4.603535 GGGGCTGGTGTTGGTGCT 62.604 66.667 0.00 0.00 0.00 4.40
4554 9442 2.985847 GGGCTGGTGTTGGTGCTC 60.986 66.667 0.00 0.00 0.00 4.26
4555 9443 3.357079 GGCTGGTGTTGGTGCTCG 61.357 66.667 0.00 0.00 0.00 5.03
4556 9444 4.030452 GCTGGTGTTGGTGCTCGC 62.030 66.667 0.00 0.00 0.00 5.03
4557 9445 3.357079 CTGGTGTTGGTGCTCGCC 61.357 66.667 0.00 0.00 35.12 5.54
4559 9447 4.980805 GGTGTTGGTGCTCGCCGA 62.981 66.667 0.00 0.00 0.00 5.54
4560 9448 3.712881 GTGTTGGTGCTCGCCGAC 61.713 66.667 11.90 11.90 42.07 4.79
4561 9449 4.980805 TGTTGGTGCTCGCCGACC 62.981 66.667 15.22 2.74 41.24 4.79
4562 9450 4.980805 GTTGGTGCTCGCCGACCA 62.981 66.667 8.35 1.10 40.61 4.02
4564 9452 4.680237 TGGTGCTCGCCGACCAAG 62.680 66.667 0.00 0.00 39.36 3.61
4565 9453 4.681978 GGTGCTCGCCGACCAAGT 62.682 66.667 0.00 0.00 31.97 3.16
4566 9454 3.414700 GTGCTCGCCGACCAAGTG 61.415 66.667 0.00 0.00 0.00 3.16
4567 9455 4.680237 TGCTCGCCGACCAAGTGG 62.680 66.667 0.00 0.00 42.17 4.00
4577 9465 2.266055 CCAAGTGGGTCGGAGCTC 59.734 66.667 4.71 4.71 0.00 4.09
4578 9466 2.266055 CAAGTGGGTCGGAGCTCC 59.734 66.667 23.79 23.79 0.00 4.70
4579 9467 2.203788 AAGTGGGTCGGAGCTCCA 60.204 61.111 31.67 16.40 35.14 3.86
4580 9468 2.286523 AAGTGGGTCGGAGCTCCAG 61.287 63.158 31.67 23.05 35.14 3.86
4581 9469 3.775654 GTGGGTCGGAGCTCCAGG 61.776 72.222 31.67 16.98 35.14 4.45
4599 9487 3.918220 CGCAGCGCCACTTCGATC 61.918 66.667 2.29 0.00 37.18 3.69
4600 9488 2.510238 GCAGCGCCACTTCGATCT 60.510 61.111 2.29 0.00 0.00 2.75
4601 9489 2.806856 GCAGCGCCACTTCGATCTG 61.807 63.158 2.29 0.00 0.00 2.90
4602 9490 1.153765 CAGCGCCACTTCGATCTGA 60.154 57.895 2.29 0.00 0.00 3.27
4603 9491 1.153745 AGCGCCACTTCGATCTGAC 60.154 57.895 2.29 0.00 0.00 3.51
4604 9492 2.508891 GCGCCACTTCGATCTGACG 61.509 63.158 0.00 0.00 0.00 4.35
4605 9493 2.508891 CGCCACTTCGATCTGACGC 61.509 63.158 0.00 0.00 0.00 5.19
4606 9494 2.167861 GCCACTTCGATCTGACGCC 61.168 63.158 0.00 0.00 0.00 5.68
4607 9495 1.874019 CCACTTCGATCTGACGCCG 60.874 63.158 0.00 0.00 0.00 6.46
4608 9496 2.202623 ACTTCGATCTGACGCCGC 60.203 61.111 0.00 0.00 0.00 6.53
4609 9497 2.103143 CTTCGATCTGACGCCGCT 59.897 61.111 0.00 0.00 0.00 5.52
4610 9498 2.202610 TTCGATCTGACGCCGCTG 60.203 61.111 0.00 0.00 0.00 5.18
4611 9499 3.699955 TTCGATCTGACGCCGCTGG 62.700 63.158 0.00 0.00 0.00 4.85
4633 9521 4.648626 GGTGGTGGCTGCTGCTCA 62.649 66.667 15.64 8.89 39.59 4.26
4634 9522 3.054503 GTGGTGGCTGCTGCTCAG 61.055 66.667 15.64 2.74 45.62 3.35
4674 9562 3.149899 CTGGAAGCTAGGCTGTGTG 57.850 57.895 0.00 0.00 39.62 3.82
4675 9563 1.003355 TGGAAGCTAGGCTGTGTGC 60.003 57.895 0.00 0.00 39.62 4.57
4676 9564 1.298014 GGAAGCTAGGCTGTGTGCT 59.702 57.895 0.00 0.00 39.62 4.40
4677 9565 1.023513 GGAAGCTAGGCTGTGTGCTG 61.024 60.000 0.00 0.00 39.62 4.41
4678 9566 0.321122 GAAGCTAGGCTGTGTGCTGT 60.321 55.000 0.00 0.00 39.62 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 2.995258 CGTATTCCCTTCGTCCGAAAAA 59.005 45.455 3.52 0.00 33.34 1.94
11 12 2.230992 TCGTATTCCCTTCGTCCGAAAA 59.769 45.455 3.52 0.00 33.34 2.29
12 13 1.818060 TCGTATTCCCTTCGTCCGAAA 59.182 47.619 3.52 0.00 33.34 3.46
13 14 1.462616 TCGTATTCCCTTCGTCCGAA 58.537 50.000 1.81 1.81 0.00 4.30
14 15 1.462616 TTCGTATTCCCTTCGTCCGA 58.537 50.000 0.00 0.00 0.00 4.55
15 16 1.922545 GTTTCGTATTCCCTTCGTCCG 59.077 52.381 0.00 0.00 0.00 4.79
16 17 2.963432 TGTTTCGTATTCCCTTCGTCC 58.037 47.619 0.00 0.00 0.00 4.79
17 18 5.541098 AAATGTTTCGTATTCCCTTCGTC 57.459 39.130 0.00 0.00 0.00 4.20
18 19 5.952526 AAAATGTTTCGTATTCCCTTCGT 57.047 34.783 0.00 0.00 0.00 3.85
19 20 8.730970 TTTAAAAATGTTTCGTATTCCCTTCG 57.269 30.769 0.00 0.00 0.00 3.79
61 62 9.848172 GATATTTTAAAAAGTGTGCACAGTTTG 57.152 29.630 39.58 0.00 45.71 2.93
70 71 8.687301 GTGTTCGTGGATATTTTAAAAAGTGTG 58.313 33.333 4.44 0.00 0.00 3.82
71 72 8.626526 AGTGTTCGTGGATATTTTAAAAAGTGT 58.373 29.630 4.44 0.00 0.00 3.55
72 73 9.458374 AAGTGTTCGTGGATATTTTAAAAAGTG 57.542 29.630 4.44 0.00 0.00 3.16
381 386 2.512515 GCTGGCCCAGTAGCTTCG 60.513 66.667 13.35 0.00 36.99 3.79
436 441 0.107831 TTTTCGGGGACAGACACAGG 59.892 55.000 0.00 0.00 0.00 4.00
438 443 1.961793 CTTTTTCGGGGACAGACACA 58.038 50.000 0.00 0.00 0.00 3.72
439 444 0.591659 GCTTTTTCGGGGACAGACAC 59.408 55.000 0.00 0.00 0.00 3.67
441 446 1.200020 CATGCTTTTTCGGGGACAGAC 59.800 52.381 0.00 0.00 0.00 3.51
442 447 1.202879 ACATGCTTTTTCGGGGACAGA 60.203 47.619 0.00 0.00 0.00 3.41
443 448 1.247567 ACATGCTTTTTCGGGGACAG 58.752 50.000 0.00 0.00 0.00 3.51
445 450 2.812358 AAACATGCTTTTTCGGGGAC 57.188 45.000 0.00 0.00 0.00 4.46
447 452 4.326009 CGATTTAAACATGCTTTTTCGGGG 59.674 41.667 0.00 0.00 0.00 5.73
448 453 4.201580 GCGATTTAAACATGCTTTTTCGGG 60.202 41.667 0.00 0.00 0.00 5.14
451 456 4.929211 AGGGCGATTTAAACATGCTTTTTC 59.071 37.500 0.00 0.00 0.00 2.29
483 603 2.603110 CAGTTACGTGACATCATTCGGG 59.397 50.000 13.41 0.00 0.00 5.14
497 1476 7.327518 TGTTTGTATGTACATGTCTCAGTTACG 59.672 37.037 18.81 0.00 35.89 3.18
518 1497 8.427012 CAGTTTATTGATTCGAAACCATGTTTG 58.573 33.333 0.00 0.00 34.31 2.93
542 1521 4.292186 TCTTTGGAGAAATCTCACCCAG 57.708 45.455 12.21 3.11 44.60 4.45
558 1537 7.321745 ACTTGTCTCAGTTACCTTTTCTTTG 57.678 36.000 0.00 0.00 0.00 2.77
562 1541 6.905609 CGAAAACTTGTCTCAGTTACCTTTTC 59.094 38.462 0.00 0.00 35.87 2.29
580 1561 0.818040 ACAAAGGGCGAGCGAAAACT 60.818 50.000 0.00 0.00 0.00 2.66
586 1567 1.895051 CAATTTACAAAGGGCGAGCG 58.105 50.000 0.00 0.00 0.00 5.03
663 3642 6.183360 GCACTAACAGTATCATTCCTTGTGAC 60.183 42.308 0.00 0.00 0.00 3.67
689 3680 2.434884 CCGCATGTGAGCCGAACT 60.435 61.111 8.11 0.00 0.00 3.01
708 3699 2.501261 GGGTTGGGAACACTAACAGAC 58.499 52.381 0.00 0.00 41.85 3.51
883 3876 5.506708 GCTTTTAGGGAGAGATTGGGTTAA 58.493 41.667 0.00 0.00 0.00 2.01
892 3885 1.625508 GGGAGGGCTTTTAGGGAGAGA 60.626 57.143 0.00 0.00 0.00 3.10
961 3954 5.771666 TCTCTTGCCAAATGTTGAATCTCTT 59.228 36.000 0.00 0.00 0.00 2.85
977 3970 0.944386 TGCTCGTTTGTTCTCTTGCC 59.056 50.000 0.00 0.00 0.00 4.52
989 3982 1.298859 GGACGCCATTTCTGCTCGTT 61.299 55.000 0.00 0.00 32.67 3.85
993 3986 1.078143 GGAGGACGCCATTTCTGCT 60.078 57.895 0.00 0.00 0.00 4.24
1015 4008 2.841988 GAGGAGGAGGGCGCAGAT 60.842 66.667 10.83 0.00 0.00 2.90
1048 4041 3.952508 ACCATGGCAGTGGCACGA 61.953 61.111 23.12 0.00 43.27 4.35
1089 4082 7.701539 AATCAAGTAACATTAGATTGGTGCA 57.298 32.000 0.00 0.00 0.00 4.57
1132 4126 0.390735 GGTAGTTAGCCACGGTGGTG 60.391 60.000 26.86 4.54 40.46 4.17
1839 4833 1.805945 CGAGCAGGTTCGTGTAGGC 60.806 63.158 0.00 0.00 35.91 3.93
1847 4841 0.169009 GCATTTGGTCGAGCAGGTTC 59.831 55.000 17.81 5.45 0.00 3.62
2264 5258 0.250684 TCTCATTCAACGGCTTGCCA 60.251 50.000 12.45 0.00 0.00 4.92
2565 6259 6.883744 ACAACCACAATTACTGGAAAACAAT 58.116 32.000 8.09 0.00 32.55 2.71
2706 6405 9.959721 ACTATTAAACTCATCCTGCTAAAAAGA 57.040 29.630 0.00 0.00 0.00 2.52
2715 6414 9.838339 ACTTATCCAACTATTAAACTCATCCTG 57.162 33.333 0.00 0.00 0.00 3.86
2744 6446 1.960417 TCAACGTTGAGGCAATGTGA 58.040 45.000 26.53 0.56 41.92 3.58
2745 6447 2.485426 AGATCAACGTTGAGGCAATGTG 59.515 45.455 32.19 3.64 41.92 3.21
2790 6492 9.804758 AATTCACAAGCTTAGTATGTACTCTAC 57.195 33.333 0.00 0.00 37.73 2.59
2854 6556 3.130633 TCACACATGTTTCGAGGTGAAG 58.869 45.455 10.93 0.00 37.99 3.02
3570 8324 7.877612 TGTGAGCAACAAATCATTAGTCTCTAA 59.122 33.333 0.00 0.00 35.24 2.10
3594 8348 2.936919 TCAACATTGAGCTGAGGTGT 57.063 45.000 0.00 0.00 32.50 4.16
3607 8361 6.650427 TGGTAGTAAGCGATAGATCAACAT 57.350 37.500 0.00 0.00 39.76 2.71
3617 8371 4.332819 GCAAAAGACATGGTAGTAAGCGAT 59.667 41.667 0.00 0.00 0.00 4.58
3623 8377 3.244735 TGCAGGCAAAAGACATGGTAGTA 60.245 43.478 0.00 0.00 0.00 1.82
3683 8437 4.800471 CGACAATCATCTCATTCTTCGACA 59.200 41.667 0.00 0.00 0.00 4.35
3780 8539 2.771089 TCACTGAAGCTGCGAGAAAAT 58.229 42.857 0.00 0.00 0.00 1.82
3781 8540 2.238942 TCACTGAAGCTGCGAGAAAA 57.761 45.000 0.00 0.00 0.00 2.29
3782 8541 2.071540 CATCACTGAAGCTGCGAGAAA 58.928 47.619 0.00 0.00 0.00 2.52
3788 8547 4.749099 CCTAATAGACATCACTGAAGCTGC 59.251 45.833 0.00 0.00 0.00 5.25
3810 8569 7.096599 GCAAATTCTTTAGAACGAAAGACAACC 60.097 37.037 9.00 0.00 43.45 3.77
3820 8579 5.343058 CACATGTGGCAAATTCTTTAGAACG 59.657 40.000 18.51 0.00 36.80 3.95
3913 8672 7.092716 GGAGTAATCGAGTAACCAACTTACAA 58.907 38.462 10.93 0.00 39.07 2.41
3943 8702 8.723942 AAGAGCGTTTATATCACTTTCTTCAT 57.276 30.769 0.00 0.00 0.00 2.57
3963 8748 9.396938 GTACTCCTCGTAAAGAAATATAAGAGC 57.603 37.037 0.00 0.00 0.00 4.09
3975 8760 6.236017 TGCAATTTTGTACTCCTCGTAAAG 57.764 37.500 0.00 0.00 0.00 1.85
3979 8764 5.705609 AAATGCAATTTTGTACTCCTCGT 57.294 34.783 0.00 0.00 46.10 4.18
3980 8765 5.732647 CGTAAATGCAATTTTGTACTCCTCG 59.267 40.000 0.00 0.00 46.10 4.63
3981 8766 6.027749 CCGTAAATGCAATTTTGTACTCCTC 58.972 40.000 0.00 0.00 46.10 3.71
3982 8767 5.708230 TCCGTAAATGCAATTTTGTACTCCT 59.292 36.000 0.00 0.00 46.10 3.69
4030 8818 6.545666 ACACTTAACAATCTCAATGTCCACAA 59.454 34.615 0.00 0.00 0.00 3.33
4032 8820 6.017109 ACACACTTAACAATCTCAATGTCCAC 60.017 38.462 0.00 0.00 0.00 4.02
4058 8846 0.104934 ACAGTCCCTGTGTCCCTCTT 60.105 55.000 0.00 0.00 43.63 2.85
4069 8888 0.468029 CAGCAAAACCCACAGTCCCT 60.468 55.000 0.00 0.00 0.00 4.20
4077 8896 1.971167 CTAGCCGCAGCAAAACCCA 60.971 57.895 0.00 0.00 43.56 4.51
4078 8897 2.700773 CCTAGCCGCAGCAAAACCC 61.701 63.158 0.00 0.00 43.56 4.11
4082 8901 2.046314 GGTCCTAGCCGCAGCAAA 60.046 61.111 0.00 0.00 43.56 3.68
4083 8902 3.318384 TGGTCCTAGCCGCAGCAA 61.318 61.111 0.00 0.00 43.56 3.91
4084 8903 4.082523 GTGGTCCTAGCCGCAGCA 62.083 66.667 0.00 0.00 43.56 4.41
4085 8904 4.840005 GGTGGTCCTAGCCGCAGC 62.840 72.222 0.00 0.00 40.61 5.25
4086 8905 4.162690 GGGTGGTCCTAGCCGCAG 62.163 72.222 0.00 0.00 40.61 5.18
4095 8914 4.035102 GCTGGTGGAGGGTGGTCC 62.035 72.222 0.00 0.00 37.10 4.46
4096 8915 4.394712 CGCTGGTGGAGGGTGGTC 62.395 72.222 0.00 0.00 0.00 4.02
4107 8926 3.560251 AAGGACACCTGCGCTGGT 61.560 61.111 30.90 30.90 41.77 4.00
4108 8927 2.449031 TACAAGGACACCTGCGCTGG 62.449 60.000 29.48 29.48 32.13 4.85
4109 8928 1.005037 TACAAGGACACCTGCGCTG 60.005 57.895 9.73 8.47 32.13 5.18
4110 8929 1.293498 CTACAAGGACACCTGCGCT 59.707 57.895 9.73 0.00 32.13 5.92
4111 8930 2.391389 GCTACAAGGACACCTGCGC 61.391 63.158 0.00 0.00 32.13 6.09
4120 9008 4.284490 AGTGAAGTCTGAATGCTACAAGGA 59.716 41.667 0.00 0.00 0.00 3.36
4135 9023 5.007724 CCCTAACTTGTGTGAAAGTGAAGTC 59.992 44.000 0.00 0.00 40.28 3.01
4146 9034 1.339151 GCCCTCTCCCTAACTTGTGTG 60.339 57.143 0.00 0.00 0.00 3.82
4147 9035 0.984995 GCCCTCTCCCTAACTTGTGT 59.015 55.000 0.00 0.00 0.00 3.72
4182 9070 2.659897 CCGCCAGTCGCATAGAGC 60.660 66.667 0.00 0.00 37.30 4.09
4183 9071 1.141881 AACCGCCAGTCGCATAGAG 59.858 57.895 0.00 0.00 37.30 2.43
4184 9072 1.153647 CAACCGCCAGTCGCATAGA 60.154 57.895 0.00 0.00 37.30 1.98
4185 9073 2.813179 GCAACCGCCAGTCGCATAG 61.813 63.158 0.00 0.00 37.30 2.23
4186 9074 1.950973 TAGCAACCGCCAGTCGCATA 61.951 55.000 0.00 0.00 39.83 3.14
4187 9075 2.796483 TTAGCAACCGCCAGTCGCAT 62.796 55.000 0.00 0.00 39.83 4.73
4188 9076 2.796483 ATTAGCAACCGCCAGTCGCA 62.796 55.000 0.00 0.00 39.83 5.10
4189 9077 1.644786 AATTAGCAACCGCCAGTCGC 61.645 55.000 0.00 0.00 39.83 5.19
4190 9078 0.096976 CAATTAGCAACCGCCAGTCG 59.903 55.000 0.00 0.00 39.83 4.18
4191 9079 0.179163 GCAATTAGCAACCGCCAGTC 60.179 55.000 0.00 0.00 44.79 3.51
4192 9080 1.883021 GCAATTAGCAACCGCCAGT 59.117 52.632 0.00 0.00 44.79 4.00
4193 9081 4.792106 GCAATTAGCAACCGCCAG 57.208 55.556 0.00 0.00 44.79 4.85
4202 9090 3.184581 GTGAGCGGTGTATAGCAATTAGC 59.815 47.826 0.00 0.00 46.19 3.09
4203 9091 4.445718 CAGTGAGCGGTGTATAGCAATTAG 59.554 45.833 0.00 0.00 35.48 1.73
4204 9092 4.368315 CAGTGAGCGGTGTATAGCAATTA 58.632 43.478 0.00 0.00 35.48 1.40
4205 9093 3.198068 CAGTGAGCGGTGTATAGCAATT 58.802 45.455 0.00 0.00 35.48 2.32
4206 9094 2.826428 CAGTGAGCGGTGTATAGCAAT 58.174 47.619 0.00 0.00 35.48 3.56
4207 9095 1.739035 GCAGTGAGCGGTGTATAGCAA 60.739 52.381 0.00 0.00 35.48 3.91
4208 9096 0.179111 GCAGTGAGCGGTGTATAGCA 60.179 55.000 0.00 0.00 35.48 3.49
4209 9097 2.594541 GCAGTGAGCGGTGTATAGC 58.405 57.895 0.00 0.00 0.00 2.97
4219 9107 2.588146 ATCATTTGCGCGCAGTGAGC 62.588 55.000 36.61 9.03 43.07 4.26
4220 9108 0.588233 GATCATTTGCGCGCAGTGAG 60.588 55.000 36.61 27.39 43.07 3.51
4221 9109 1.425031 GATCATTTGCGCGCAGTGA 59.575 52.632 36.38 36.38 43.07 3.41
4222 9110 1.584483 GGATCATTTGCGCGCAGTG 60.584 57.895 34.25 32.15 43.41 3.66
4223 9111 1.585267 TTGGATCATTTGCGCGCAGT 61.585 50.000 34.25 23.60 0.00 4.40
4224 9112 1.135699 GTTGGATCATTTGCGCGCAG 61.136 55.000 34.25 22.85 0.00 5.18
4225 9113 1.154054 GTTGGATCATTTGCGCGCA 60.154 52.632 33.09 33.09 0.00 6.09
4226 9114 2.216920 CGTTGGATCATTTGCGCGC 61.217 57.895 27.26 27.26 0.00 6.86
4227 9115 2.216920 GCGTTGGATCATTTGCGCG 61.217 57.895 0.00 0.00 35.71 6.86
4228 9116 1.873572 GGCGTTGGATCATTTGCGC 60.874 57.895 0.00 0.00 43.46 6.09
4229 9117 0.523968 CAGGCGTTGGATCATTTGCG 60.524 55.000 0.00 0.00 0.00 4.85
4230 9118 0.803380 GCAGGCGTTGGATCATTTGC 60.803 55.000 0.00 0.00 0.00 3.68
4231 9119 0.527113 TGCAGGCGTTGGATCATTTG 59.473 50.000 0.00 0.00 0.00 2.32
4232 9120 0.813184 CTGCAGGCGTTGGATCATTT 59.187 50.000 5.57 0.00 0.00 2.32
4233 9121 1.660560 GCTGCAGGCGTTGGATCATT 61.661 55.000 17.12 0.00 0.00 2.57
4234 9122 2.117156 GCTGCAGGCGTTGGATCAT 61.117 57.895 17.12 0.00 0.00 2.45
4235 9123 2.747460 GCTGCAGGCGTTGGATCA 60.747 61.111 17.12 0.00 0.00 2.92
4245 9133 3.423154 GTCGGGTTTCGCTGCAGG 61.423 66.667 17.12 5.82 39.05 4.85
4246 9134 3.777925 CGTCGGGTTTCGCTGCAG 61.778 66.667 10.11 10.11 39.05 4.41
4247 9135 4.595538 ACGTCGGGTTTCGCTGCA 62.596 61.111 0.00 0.00 39.05 4.41
4248 9136 3.774702 GACGTCGGGTTTCGCTGC 61.775 66.667 0.00 0.00 39.05 5.25
4249 9137 2.355363 TGACGTCGGGTTTCGCTG 60.355 61.111 11.62 0.00 39.05 5.18
4250 9138 2.049433 CTGACGTCGGGTTTCGCT 60.049 61.111 16.99 0.00 39.05 4.93
4251 9139 3.774702 GCTGACGTCGGGTTTCGC 61.775 66.667 25.20 4.13 39.05 4.70
4252 9140 3.467119 CGCTGACGTCGGGTTTCG 61.467 66.667 25.20 15.93 40.90 3.46
4253 9141 3.110178 CCGCTGACGTCGGGTTTC 61.110 66.667 25.20 8.00 42.99 2.78
4284 9172 7.531280 TGCACGAAATGAATCAAAAGAAAAA 57.469 28.000 0.00 0.00 0.00 1.94
4285 9173 7.531280 TTGCACGAAATGAATCAAAAGAAAA 57.469 28.000 0.00 0.00 0.00 2.29
4286 9174 7.712264 ATTGCACGAAATGAATCAAAAGAAA 57.288 28.000 0.00 0.00 0.00 2.52
4287 9175 7.712264 AATTGCACGAAATGAATCAAAAGAA 57.288 28.000 0.00 0.00 0.00 2.52
4288 9176 7.712264 AAATTGCACGAAATGAATCAAAAGA 57.288 28.000 0.00 0.00 0.00 2.52
4289 9177 9.679596 GATAAATTGCACGAAATGAATCAAAAG 57.320 29.630 0.00 0.00 0.00 2.27
4290 9178 9.201127 TGATAAATTGCACGAAATGAATCAAAA 57.799 25.926 0.00 0.00 0.00 2.44
4291 9179 8.754230 TGATAAATTGCACGAAATGAATCAAA 57.246 26.923 0.00 0.00 0.00 2.69
4292 9180 8.028354 ACTGATAAATTGCACGAAATGAATCAA 58.972 29.630 0.00 0.00 0.00 2.57
4293 9181 7.537715 ACTGATAAATTGCACGAAATGAATCA 58.462 30.769 0.00 0.00 0.00 2.57
4294 9182 7.975866 ACTGATAAATTGCACGAAATGAATC 57.024 32.000 0.00 0.00 0.00 2.52
4295 9183 8.761575 AAACTGATAAATTGCACGAAATGAAT 57.238 26.923 0.00 0.00 0.00 2.57
4296 9184 9.853555 ATAAACTGATAAATTGCACGAAATGAA 57.146 25.926 0.00 0.00 0.00 2.57
4297 9185 9.853555 AATAAACTGATAAATTGCACGAAATGA 57.146 25.926 0.00 0.00 0.00 2.57
4324 9212 8.876181 AGGCTAAATAAAACCTGGTTACAAAAT 58.124 29.630 13.37 1.08 0.00 1.82
4325 9213 8.252624 AGGCTAAATAAAACCTGGTTACAAAA 57.747 30.769 13.37 0.00 0.00 2.44
4326 9214 7.842887 AGGCTAAATAAAACCTGGTTACAAA 57.157 32.000 13.37 0.00 0.00 2.83
4327 9215 7.842887 AAGGCTAAATAAAACCTGGTTACAA 57.157 32.000 13.37 1.66 31.32 2.41
4328 9216 7.842887 AAAGGCTAAATAAAACCTGGTTACA 57.157 32.000 13.37 3.95 31.32 2.41
4329 9217 8.145767 ACAAAAGGCTAAATAAAACCTGGTTAC 58.854 33.333 13.37 0.00 31.32 2.50
4330 9218 8.145122 CACAAAAGGCTAAATAAAACCTGGTTA 58.855 33.333 13.37 0.00 31.32 2.85
4331 9219 6.989759 CACAAAAGGCTAAATAAAACCTGGTT 59.010 34.615 6.18 6.18 31.32 3.67
4332 9220 6.099125 ACACAAAAGGCTAAATAAAACCTGGT 59.901 34.615 0.00 0.00 31.32 4.00
4333 9221 6.521162 ACACAAAAGGCTAAATAAAACCTGG 58.479 36.000 0.00 0.00 31.32 4.45
4334 9222 8.432110 AAACACAAAAGGCTAAATAAAACCTG 57.568 30.769 0.00 0.00 31.32 4.00
4342 9230 9.884636 GGGATAATAAAACACAAAAGGCTAAAT 57.115 29.630 0.00 0.00 0.00 1.40
4343 9231 9.095700 AGGGATAATAAAACACAAAAGGCTAAA 57.904 29.630 0.00 0.00 0.00 1.85
4344 9232 8.658840 AGGGATAATAAAACACAAAAGGCTAA 57.341 30.769 0.00 0.00 0.00 3.09
4345 9233 8.658840 AAGGGATAATAAAACACAAAAGGCTA 57.341 30.769 0.00 0.00 0.00 3.93
4346 9234 7.454694 AGAAGGGATAATAAAACACAAAAGGCT 59.545 33.333 0.00 0.00 0.00 4.58
4347 9235 7.545615 CAGAAGGGATAATAAAACACAAAAGGC 59.454 37.037 0.00 0.00 0.00 4.35
4348 9236 8.585018 ACAGAAGGGATAATAAAACACAAAAGG 58.415 33.333 0.00 0.00 0.00 3.11
4349 9237 9.981114 AACAGAAGGGATAATAAAACACAAAAG 57.019 29.630 0.00 0.00 0.00 2.27
4352 9240 9.974980 GAAAACAGAAGGGATAATAAAACACAA 57.025 29.630 0.00 0.00 0.00 3.33
4353 9241 9.362151 AGAAAACAGAAGGGATAATAAAACACA 57.638 29.630 0.00 0.00 0.00 3.72
4405 9293 9.337396 AGCCGACTCATGTATTTCAATTTATTA 57.663 29.630 0.00 0.00 0.00 0.98
4406 9294 8.225603 AGCCGACTCATGTATTTCAATTTATT 57.774 30.769 0.00 0.00 0.00 1.40
4407 9295 7.807977 AGCCGACTCATGTATTTCAATTTAT 57.192 32.000 0.00 0.00 0.00 1.40
4408 9296 7.766738 TGTAGCCGACTCATGTATTTCAATTTA 59.233 33.333 0.00 0.00 0.00 1.40
4409 9297 6.597672 TGTAGCCGACTCATGTATTTCAATTT 59.402 34.615 0.00 0.00 0.00 1.82
4410 9298 6.112734 TGTAGCCGACTCATGTATTTCAATT 58.887 36.000 0.00 0.00 0.00 2.32
4411 9299 5.670485 TGTAGCCGACTCATGTATTTCAAT 58.330 37.500 0.00 0.00 0.00 2.57
4412 9300 5.079689 TGTAGCCGACTCATGTATTTCAA 57.920 39.130 0.00 0.00 0.00 2.69
4413 9301 4.729227 TGTAGCCGACTCATGTATTTCA 57.271 40.909 0.00 0.00 0.00 2.69
4414 9302 4.686554 GGATGTAGCCGACTCATGTATTTC 59.313 45.833 0.00 0.00 0.00 2.17
4415 9303 4.503296 GGGATGTAGCCGACTCATGTATTT 60.503 45.833 0.00 0.00 0.00 1.40
4416 9304 3.006967 GGGATGTAGCCGACTCATGTATT 59.993 47.826 0.00 0.00 0.00 1.89
4417 9305 2.563179 GGGATGTAGCCGACTCATGTAT 59.437 50.000 0.00 0.00 0.00 2.29
4418 9306 1.961394 GGGATGTAGCCGACTCATGTA 59.039 52.381 0.00 0.00 0.00 2.29
4419 9307 0.753262 GGGATGTAGCCGACTCATGT 59.247 55.000 0.00 0.00 0.00 3.21
4420 9308 0.034059 GGGGATGTAGCCGACTCATG 59.966 60.000 0.00 0.00 0.00 3.07
4421 9309 1.464376 CGGGGATGTAGCCGACTCAT 61.464 60.000 0.00 0.00 0.00 2.90
4422 9310 2.125326 CGGGGATGTAGCCGACTCA 61.125 63.158 0.00 0.00 0.00 3.41
4423 9311 2.728817 CGGGGATGTAGCCGACTC 59.271 66.667 0.00 0.00 0.00 3.36
4424 9312 3.537874 GCGGGGATGTAGCCGACT 61.538 66.667 0.00 0.00 0.00 4.18
4425 9313 4.944372 CGCGGGGATGTAGCCGAC 62.944 72.222 0.00 0.00 0.00 4.79
4428 9316 4.910585 CACCGCGGGGATGTAGCC 62.911 72.222 31.76 0.00 36.97 3.93
4429 9317 4.910585 CCACCGCGGGGATGTAGC 62.911 72.222 33.49 0.00 36.97 3.58
4430 9318 2.436087 GATCCACCGCGGGGATGTAG 62.436 65.000 37.27 20.81 45.05 2.74
4431 9319 2.445085 ATCCACCGCGGGGATGTA 60.445 61.111 33.85 17.92 43.44 2.29
4432 9320 3.861797 GATCCACCGCGGGGATGT 61.862 66.667 37.27 23.94 45.05 3.06
4433 9321 3.550431 AGATCCACCGCGGGGATG 61.550 66.667 37.27 25.08 45.05 3.51
4446 9334 4.521062 AGACGCGCAGGCCAGATC 62.521 66.667 5.73 0.00 35.02 2.75
4447 9335 4.827087 CAGACGCGCAGGCCAGAT 62.827 66.667 5.73 0.00 35.02 2.90
4454 9342 4.498520 ACGGATCCAGACGCGCAG 62.499 66.667 13.41 2.42 0.00 5.18
4455 9343 4.794439 CACGGATCCAGACGCGCA 62.794 66.667 13.41 0.00 0.00 6.09
4458 9346 4.796231 ACGCACGGATCCAGACGC 62.796 66.667 13.41 7.07 0.00 5.19
4459 9347 2.880879 CACGCACGGATCCAGACG 60.881 66.667 13.41 13.70 0.00 4.18
4460 9348 3.188786 GCACGCACGGATCCAGAC 61.189 66.667 13.41 0.00 0.00 3.51
4461 9349 4.794439 CGCACGCACGGATCCAGA 62.794 66.667 13.41 0.00 0.00 3.86
4504 9392 4.394712 GGACCCACGAGCCACCAG 62.395 72.222 0.00 0.00 0.00 4.00
4536 9424 4.603535 AGCACCAACACCAGCCCC 62.604 66.667 0.00 0.00 0.00 5.80
4537 9425 2.985847 GAGCACCAACACCAGCCC 60.986 66.667 0.00 0.00 0.00 5.19
4538 9426 3.357079 CGAGCACCAACACCAGCC 61.357 66.667 0.00 0.00 0.00 4.85
4539 9427 4.030452 GCGAGCACCAACACCAGC 62.030 66.667 0.00 0.00 0.00 4.85
4540 9428 3.357079 GGCGAGCACCAACACCAG 61.357 66.667 0.00 0.00 0.00 4.00
4542 9430 4.980805 TCGGCGAGCACCAACACC 62.981 66.667 4.99 0.00 0.00 4.16
4543 9431 3.712881 GTCGGCGAGCACCAACAC 61.713 66.667 11.20 0.00 0.00 3.32
4544 9432 4.980805 GGTCGGCGAGCACCAACA 62.981 66.667 31.62 0.00 32.33 3.33
4545 9433 4.980805 TGGTCGGCGAGCACCAAC 62.981 66.667 34.77 10.91 39.85 3.77
4547 9435 4.680237 CTTGGTCGGCGAGCACCA 62.680 66.667 37.63 26.03 39.84 4.17
4548 9436 4.681978 ACTTGGTCGGCGAGCACC 62.682 66.667 37.63 23.70 39.84 5.01
4549 9437 3.414700 CACTTGGTCGGCGAGCAC 61.415 66.667 37.63 18.94 39.84 4.40
4550 9438 4.680237 CCACTTGGTCGGCGAGCA 62.680 66.667 34.77 34.77 38.32 4.26
4560 9448 2.266055 GAGCTCCGACCCACTTGG 59.734 66.667 0.87 0.00 41.37 3.61
4561 9449 2.266055 GGAGCTCCGACCCACTTG 59.734 66.667 19.06 0.00 0.00 3.16
4562 9450 2.203788 TGGAGCTCCGACCCACTT 60.204 61.111 27.43 0.00 39.43 3.16
4563 9451 2.681778 CTGGAGCTCCGACCCACT 60.682 66.667 27.43 0.00 39.43 4.00
4564 9452 3.775654 CCTGGAGCTCCGACCCAC 61.776 72.222 27.43 2.45 39.43 4.61
4583 9471 2.510238 AGATCGAAGTGGCGCTGC 60.510 61.111 7.64 0.00 0.00 5.25
4584 9472 1.153765 TCAGATCGAAGTGGCGCTG 60.154 57.895 7.64 0.00 0.00 5.18
4585 9473 1.153745 GTCAGATCGAAGTGGCGCT 60.154 57.895 7.64 0.00 0.00 5.92
4586 9474 2.508891 CGTCAGATCGAAGTGGCGC 61.509 63.158 10.87 0.00 34.62 6.53
4587 9475 2.508891 GCGTCAGATCGAAGTGGCG 61.509 63.158 17.32 17.32 44.57 5.69
4588 9476 2.167861 GGCGTCAGATCGAAGTGGC 61.168 63.158 0.00 0.00 0.00 5.01
4589 9477 1.874019 CGGCGTCAGATCGAAGTGG 60.874 63.158 0.00 0.00 0.00 4.00
4590 9478 2.508891 GCGGCGTCAGATCGAAGTG 61.509 63.158 9.37 0.00 0.00 3.16
4591 9479 2.202623 GCGGCGTCAGATCGAAGT 60.203 61.111 9.37 0.00 0.00 3.01
4592 9480 2.103143 AGCGGCGTCAGATCGAAG 59.897 61.111 9.37 0.00 0.00 3.79
4593 9481 2.202610 CAGCGGCGTCAGATCGAA 60.203 61.111 9.37 0.00 0.00 3.71
4594 9482 4.193334 CCAGCGGCGTCAGATCGA 62.193 66.667 9.37 0.00 0.00 3.59
4616 9504 4.648626 TGAGCAGCAGCCACCACC 62.649 66.667 0.00 0.00 43.56 4.61
4617 9505 3.054503 CTGAGCAGCAGCCACCAC 61.055 66.667 0.00 0.00 43.56 4.16
4628 9516 4.383861 CCACCTCGCTGCTGAGCA 62.384 66.667 7.05 7.05 46.62 4.26
4647 9535 3.376935 TAGCTTCCAGCAGCGAGCC 62.377 63.158 0.00 0.00 45.56 4.70
4648 9536 1.882167 CTAGCTTCCAGCAGCGAGC 60.882 63.158 0.00 5.34 45.56 5.03
4649 9537 1.227205 CCTAGCTTCCAGCAGCGAG 60.227 63.158 0.00 0.00 45.56 5.03
4650 9538 2.895680 CCTAGCTTCCAGCAGCGA 59.104 61.111 0.00 0.00 45.56 4.93
4651 9539 2.894387 GCCTAGCTTCCAGCAGCG 60.894 66.667 0.00 0.00 45.56 5.18
4652 9540 1.818785 CAGCCTAGCTTCCAGCAGC 60.819 63.158 0.00 0.00 45.56 5.25
4653 9541 0.743701 CACAGCCTAGCTTCCAGCAG 60.744 60.000 0.00 0.00 45.56 4.24
4654 9542 1.297689 CACAGCCTAGCTTCCAGCA 59.702 57.895 0.00 0.00 45.56 4.41
4655 9543 1.023513 CACACAGCCTAGCTTCCAGC 61.024 60.000 0.00 0.00 42.84 4.85
4656 9544 1.023513 GCACACAGCCTAGCTTCCAG 61.024 60.000 0.00 0.00 36.40 3.86
4657 9545 1.003355 GCACACAGCCTAGCTTCCA 60.003 57.895 0.00 0.00 36.40 3.53
4658 9546 3.896479 GCACACAGCCTAGCTTCC 58.104 61.111 0.00 0.00 36.40 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.