Multiple sequence alignment - TraesCS7D01G253600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G253600 chr7D 100.000 5503 0 0 1 5503 229969711 229964209 0.000000e+00 10163.0
1 TraesCS7D01G253600 chr7D 86.316 95 8 2 3623 3713 467122979 467122886 1.260000e-16 99.0
2 TraesCS7D01G253600 chr7D 89.583 48 3 2 3611 3657 30483423 30483377 5.950000e-05 60.2
3 TraesCS7D01G253600 chr7B 94.328 1622 64 8 1 1621 201166884 201165290 0.000000e+00 2460.0
4 TraesCS7D01G253600 chr7B 91.060 783 46 14 3734 4501 201163632 201162859 0.000000e+00 1037.0
5 TraesCS7D01G253600 chr7B 84.967 1051 76 39 1613 2611 201165379 201164359 0.000000e+00 990.0
6 TraesCS7D01G253600 chr7B 89.723 613 34 13 2915 3511 201164295 201163696 0.000000e+00 756.0
7 TraesCS7D01G253600 chr7B 90.389 489 29 6 5029 5503 201158243 201157759 1.300000e-175 627.0
8 TraesCS7D01G253600 chr7B 95.413 109 3 2 4676 4784 201162427 201162321 7.330000e-39 172.0
9 TraesCS7D01G253600 chr7B 89.189 111 10 2 3501 3610 920885 920776 2.670000e-28 137.0
10 TraesCS7D01G253600 chr7B 89.189 111 9 3 3501 3610 513956262 513956154 9.620000e-28 135.0
11 TraesCS7D01G253600 chr7B 93.182 88 3 1 4547 4631 201162849 201162762 5.790000e-25 126.0
12 TraesCS7D01G253600 chr7B 90.217 92 9 0 3516 3607 36040728 36040819 2.690000e-23 121.0
13 TraesCS7D01G253600 chr7B 93.151 73 4 1 4801 4873 201158361 201158290 7.540000e-19 106.0
14 TraesCS7D01G253600 chr7B 97.143 35 1 0 2826 2860 201164330 201164296 5.950000e-05 60.2
15 TraesCS7D01G253600 chr7B 96.875 32 1 0 2790 2821 417553341 417553372 3.000000e-03 54.7
16 TraesCS7D01G253600 chr7A 91.025 1649 110 16 3 1621 242061254 242059614 0.000000e+00 2191.0
17 TraesCS7D01G253600 chr7A 91.649 934 46 16 1610 2516 242059707 242058779 0.000000e+00 1264.0
18 TraesCS7D01G253600 chr7A 90.281 782 41 15 3706 4473 242057667 242056907 0.000000e+00 990.0
19 TraesCS7D01G253600 chr7A 90.798 489 30 3 5029 5503 242056194 242055707 1.670000e-179 640.0
20 TraesCS7D01G253600 chr7A 93.391 348 15 3 3171 3511 242058036 242057690 4.920000e-140 508.0
21 TraesCS7D01G253600 chr7A 86.066 366 22 15 4421 4783 242056752 242056413 3.130000e-97 366.0
22 TraesCS7D01G253600 chr7A 96.835 158 4 1 2833 2990 242058427 242058271 4.230000e-66 263.0
23 TraesCS7D01G253600 chr7A 81.503 173 13 6 2621 2774 513541065 513541237 2.080000e-24 124.0
24 TraesCS7D01G253600 chr7A 79.412 170 17 4 2621 2772 20680105 20679936 2.710000e-18 104.0
25 TraesCS7D01G253600 chr7A 86.813 91 7 2 3624 3709 19313519 19313429 4.540000e-16 97.1
26 TraesCS7D01G253600 chr7A 91.667 72 3 1 2505 2576 242058756 242058688 4.540000e-16 97.1
27 TraesCS7D01G253600 chrUn 88.636 132 7 2 2620 2743 79805285 79805416 2.650000e-33 154.0
28 TraesCS7D01G253600 chrUn 88.235 85 6 1 3624 3704 75308469 75308385 1.260000e-16 99.0
29 TraesCS7D01G253600 chrUn 88.235 85 6 1 3624 3704 242405211 242405295 1.260000e-16 99.0
30 TraesCS7D01G253600 chr5D 92.929 99 7 0 3512 3610 544700381 544700479 1.600000e-30 145.0
31 TraesCS7D01G253600 chr5D 86.441 59 4 2 2738 2796 55535264 55535318 1.660000e-05 62.1
32 TraesCS7D01G253600 chr5D 100.000 31 0 0 2790 2820 423539986 423540016 2.140000e-04 58.4
33 TraesCS7D01G253600 chr5D 100.000 29 0 0 2788 2816 458906063 458906091 3.000000e-03 54.7
34 TraesCS7D01G253600 chr6A 93.684 95 6 0 3516 3610 613616701 613616607 5.750000e-30 143.0
35 TraesCS7D01G253600 chr6A 80.128 156 27 3 4800 4953 520671131 520670978 4.510000e-21 113.0
36 TraesCS7D01G253600 chr6A 91.837 49 4 0 1837 1885 601669873 601669825 9.890000e-08 69.4
37 TraesCS7D01G253600 chr6A 100.000 29 0 0 2790 2818 604588000 604588028 3.000000e-03 54.7
38 TraesCS7D01G253600 chr5A 93.684 95 6 0 3516 3610 29712643 29712737 5.750000e-30 143.0
39 TraesCS7D01G253600 chr5A 90.566 106 8 2 3505 3610 75061545 75061442 7.430000e-29 139.0
40 TraesCS7D01G253600 chr5A 82.166 157 23 4 4800 4953 10854586 10854432 4.470000e-26 130.0
41 TraesCS7D01G253600 chr5A 87.000 100 13 0 3513 3612 77990695 77990794 4.510000e-21 113.0
42 TraesCS7D01G253600 chr5A 88.372 86 6 1 3624 3705 112221117 112221032 3.510000e-17 100.0
43 TraesCS7D01G253600 chr5A 87.500 56 2 4 2739 2794 559833334 559833284 5.950000e-05 60.2
44 TraesCS7D01G253600 chr5A 100.000 32 0 0 2743 2774 654622283 654622314 5.950000e-05 60.2
45 TraesCS7D01G253600 chr2A 92.857 98 7 0 3513 3610 16547048 16546951 5.750000e-30 143.0
46 TraesCS7D01G253600 chr2A 92.079 101 8 0 3510 3610 33330857 33330957 5.750000e-30 143.0
47 TraesCS7D01G253600 chr2A 85.401 137 9 5 2621 2748 155593920 155593786 1.240000e-26 132.0
48 TraesCS7D01G253600 chr2A 88.660 97 11 0 3516 3612 114848289 114848193 9.680000e-23 119.0
49 TraesCS7D01G253600 chr2A 84.536 97 12 3 4903 4998 771303496 771303590 5.870000e-15 93.5
50 TraesCS7D01G253600 chr2A 94.444 54 3 0 4947 5000 385298775 385298828 3.530000e-12 84.2
51 TraesCS7D01G253600 chr2A 96.970 33 0 1 2787 2819 324635374 324635405 3.000000e-03 54.7
52 TraesCS7D01G253600 chr4A 91.919 99 8 0 3512 3610 183620226 183620128 7.430000e-29 139.0
53 TraesCS7D01G253600 chr4A 88.660 97 11 0 3516 3612 446616473 446616377 9.680000e-23 119.0
54 TraesCS7D01G253600 chr4A 87.778 90 9 2 2621 2710 703301698 703301785 2.710000e-18 104.0
55 TraesCS7D01G253600 chr4A 94.545 55 3 0 4946 5000 603376777 603376831 9.820000e-13 86.1
56 TraesCS7D01G253600 chr4A 94.643 56 2 1 4945 5000 728942511 728942565 9.820000e-13 86.1
57 TraesCS7D01G253600 chr4A 94.643 56 1 2 4945 5000 728942608 728942661 9.820000e-13 86.1
58 TraesCS7D01G253600 chr4A 94.444 54 3 0 4947 5000 625958147 625958094 3.530000e-12 84.2
59 TraesCS7D01G253600 chr4A 78.125 128 24 2 4806 4931 729864565 729864440 1.640000e-10 78.7
60 TraesCS7D01G253600 chr6D 83.974 156 8 2 2617 2755 45503205 45503360 3.460000e-27 134.0
61 TraesCS7D01G253600 chr6D 84.211 152 7 2 2621 2755 45503066 45503217 1.240000e-26 132.0
62 TraesCS7D01G253600 chr6D 84.259 108 10 4 2612 2713 13557737 13557631 1.260000e-16 99.0
63 TraesCS7D01G253600 chr6D 95.556 45 2 0 1841 1885 377542149 377542105 7.650000e-09 73.1
64 TraesCS7D01G253600 chr6D 86.364 66 5 3 2718 2781 91845534 91845471 9.890000e-08 69.4
65 TraesCS7D01G253600 chr6D 96.875 32 1 0 2790 2821 293177260 293177229 3.000000e-03 54.7
66 TraesCS7D01G253600 chr6D 96.875 32 1 0 2790 2821 359354799 359354768 3.000000e-03 54.7
67 TraesCS7D01G253600 chr6D 100.000 28 0 0 2790 2817 42565356 42565383 1.000000e-02 52.8
68 TraesCS7D01G253600 chr4B 89.796 98 10 0 3515 3612 32906429 32906332 5.790000e-25 126.0
69 TraesCS7D01G253600 chr4B 79.817 109 15 2 4845 4953 514047080 514047181 7.650000e-09 73.1
70 TraesCS7D01G253600 chr4B 96.875 32 1 0 2790 2821 535345138 535345169 3.000000e-03 54.7
71 TraesCS7D01G253600 chr2B 88.889 99 11 0 3515 3613 796342749 796342651 7.490000e-24 122.0
72 TraesCS7D01G253600 chr2B 88.542 96 11 0 3517 3612 712827970 712827875 3.480000e-22 117.0
73 TraesCS7D01G253600 chr2B 87.500 88 7 1 3624 3707 211038883 211038796 1.260000e-16 99.0
74 TraesCS7D01G253600 chr1D 82.895 152 9 2 2621 2755 435798802 435798953 2.690000e-23 121.0
75 TraesCS7D01G253600 chr1D 88.660 97 11 0 3516 3612 334658642 334658738 9.680000e-23 119.0
76 TraesCS7D01G253600 chr1D 96.226 53 1 1 4948 5000 383152382 383152331 9.820000e-13 86.1
77 TraesCS7D01G253600 chr3B 90.110 91 9 0 3523 3613 160843172 160843082 9.680000e-23 119.0
78 TraesCS7D01G253600 chr3B 88.660 97 7 1 2621 2713 314164307 314164211 1.250000e-21 115.0
79 TraesCS7D01G253600 chr3B 79.012 162 28 6 4793 4951 592692610 592692452 7.540000e-19 106.0
80 TraesCS7D01G253600 chr3A 82.979 141 11 6 2621 2748 743565418 743565278 1.250000e-21 115.0
81 TraesCS7D01G253600 chr3A 87.500 96 9 1 2621 2713 130848281 130848186 2.100000e-19 108.0
82 TraesCS7D01G253600 chr3A 80.420 143 24 3 2607 2748 651960206 651960345 7.540000e-19 106.0
83 TraesCS7D01G253600 chr3A 94.545 55 3 0 4944 4998 83731833 83731779 9.820000e-13 86.1
84 TraesCS7D01G253600 chr5B 87.097 93 8 1 3616 3704 694322770 694322862 9.750000e-18 102.0
85 TraesCS7D01G253600 chr5B 88.571 70 4 3 2725 2794 557898162 557898097 1.270000e-11 82.4
86 TraesCS7D01G253600 chr5B 80.822 73 13 1 4860 4932 599305807 599305736 7.700000e-04 56.5
87 TraesCS7D01G253600 chr3D 88.372 86 6 1 3624 3705 328514932 328514847 3.510000e-17 100.0
88 TraesCS7D01G253600 chr3D 87.500 88 7 1 3624 3707 223683449 223683362 1.260000e-16 99.0
89 TraesCS7D01G253600 chr3D 96.154 52 2 0 4947 4998 560870747 560870696 9.820000e-13 86.1
90 TraesCS7D01G253600 chr3D 97.059 34 0 1 2790 2822 32278202 32278169 7.700000e-04 56.5
91 TraesCS7D01G253600 chr3D 100.000 29 0 0 2790 2818 410670083 410670055 3.000000e-03 54.7
92 TraesCS7D01G253600 chr1B 79.710 138 15 8 2621 2748 324939123 324938989 2.730000e-13 87.9
93 TraesCS7D01G253600 chr1B 97.500 40 1 0 2735 2774 129551222 129551261 9.890000e-08 69.4
94 TraesCS7D01G253600 chr4D 82.716 81 14 0 1805 1885 345432607 345432527 7.650000e-09 73.1
95 TraesCS7D01G253600 chr4D 100.000 28 0 0 2790 2817 117421332 117421359 1.000000e-02 52.8
96 TraesCS7D01G253600 chr4D 94.118 34 2 0 2784 2817 210483886 210483919 1.000000e-02 52.8
97 TraesCS7D01G253600 chr2D 84.211 76 11 1 4879 4953 536924560 536924485 7.650000e-09 73.1
98 TraesCS7D01G253600 chr2D 84.615 65 7 3 2711 2773 561053105 561053042 1.660000e-05 62.1
99 TraesCS7D01G253600 chr2D 97.059 34 0 1 2781 2813 544992980 544992947 7.700000e-04 56.5
100 TraesCS7D01G253600 chr6B 92.000 50 3 1 3610 3658 703494219 703494170 9.890000e-08 69.4
101 TraesCS7D01G253600 chr6B 90.000 50 4 1 3610 3658 703421591 703421542 4.600000e-06 63.9
102 TraesCS7D01G253600 chr6B 97.143 35 1 0 2788 2822 474269583 474269617 5.950000e-05 60.2
103 TraesCS7D01G253600 chr1A 100.000 28 0 0 2790 2817 9219577 9219550 1.000000e-02 52.8
104 TraesCS7D01G253600 chr1A 100.000 28 0 0 2790 2817 568688282 568688255 1.000000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G253600 chr7D 229964209 229969711 5502 True 10163.0000 10163 100.000000 1 5503 1 chr7D.!!$R2 5502
1 TraesCS7D01G253600 chr7B 201157759 201166884 9125 True 703.8000 2460 92.150667 1 5503 9 chr7B.!!$R3 5502
2 TraesCS7D01G253600 chr7A 242055707 242061254 5547 True 789.8875 2191 91.464000 3 5503 8 chr7A.!!$R3 5500


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
473 486 0.042131 AATACCAGTGGGGGAGACGA 59.958 55.0 15.21 0.0 42.91 4.20 F
474 487 0.397254 ATACCAGTGGGGGAGACGAG 60.397 60.0 15.21 0.0 42.91 4.18 F
2179 2249 0.404040 TTCGTTTGAATCTGGGGGCT 59.596 50.0 0.00 0.0 0.00 5.19 F
3406 3899 0.323542 AGTGACCACTCCCTAGTCCG 60.324 60.0 0.00 0.0 36.92 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2132 2202 0.162933 CGCCACACGTATGAACACAC 59.837 55.0 0.0 0.0 36.87 3.82 R
2206 2276 0.757188 ACTCCATCCTCTACCCAGCG 60.757 60.0 0.0 0.0 0.00 5.18 R
4028 4537 0.178767 CCGCCATGTCTGGATCTTCA 59.821 55.0 0.0 0.0 46.37 3.02 R
4673 5719 1.014352 AACGGCTCACAAGTCACAAC 58.986 50.0 0.0 0.0 0.00 3.32 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.445987 CCTCTCCTTTTCCTAGTCACCT 58.554 50.000 0.00 0.00 0.00 4.00
183 184 0.178975 TCCAACGGGTTGCCTTCATT 60.179 50.000 6.03 0.00 39.16 2.57
221 222 5.553290 TTCTCAAACACAACATTGTCGAA 57.447 34.783 0.00 0.00 39.91 3.71
299 301 1.518903 GCCGCAGCCTTCAAAAGTCT 61.519 55.000 0.00 0.00 0.00 3.24
300 302 0.519077 CCGCAGCCTTCAAAAGTCTC 59.481 55.000 0.00 0.00 0.00 3.36
355 358 3.907221 TCGAGCTAACATACTAACCCCT 58.093 45.455 0.00 0.00 0.00 4.79
434 437 2.507992 CGAGCGAGGACCAAGCAG 60.508 66.667 12.74 3.83 0.00 4.24
468 481 2.053747 AACTCAATACCAGTGGGGGA 57.946 50.000 15.21 4.22 42.91 4.81
471 484 1.486726 CTCAATACCAGTGGGGGAGAC 59.513 57.143 15.21 0.00 42.91 3.36
472 485 0.178068 CAATACCAGTGGGGGAGACG 59.822 60.000 15.21 0.00 42.91 4.18
473 486 0.042131 AATACCAGTGGGGGAGACGA 59.958 55.000 15.21 0.00 42.91 4.20
474 487 0.397254 ATACCAGTGGGGGAGACGAG 60.397 60.000 15.21 0.00 42.91 4.18
475 488 1.503401 TACCAGTGGGGGAGACGAGA 61.503 60.000 15.21 0.00 42.91 4.04
476 489 2.352032 CCAGTGGGGGAGACGAGAC 61.352 68.421 0.00 0.00 0.00 3.36
477 490 2.361357 AGTGGGGGAGACGAGACG 60.361 66.667 0.00 0.00 0.00 4.18
478 491 4.131088 GTGGGGGAGACGAGACGC 62.131 72.222 0.00 0.00 0.00 5.19
645 690 1.684869 CCCACCTCCGTGCCATAAAAT 60.685 52.381 0.00 0.00 38.79 1.82
845 890 0.457035 CACCCGCAAGCTAAATGCAT 59.543 50.000 9.42 0.00 44.01 3.96
1162 1207 1.338655 GATACTTCTCAGCCTCCGGAC 59.661 57.143 0.00 0.00 0.00 4.79
1214 1259 4.675029 CGGCCGTCCAACGACCTT 62.675 66.667 19.50 0.00 42.19 3.50
1509 1554 2.108514 CCGTACTACGTCTCGGCCA 61.109 63.158 2.24 0.00 40.58 5.36
1897 1942 4.570663 GGACGTCTCCATCGCCGG 62.571 72.222 16.46 0.00 36.42 6.13
1973 2021 1.281899 CCTCGTCGCTTTCTCATTCC 58.718 55.000 0.00 0.00 0.00 3.01
2022 2070 1.101331 CTGGAGGCCTTTCTTGCATC 58.899 55.000 6.77 0.00 38.72 3.91
2034 2082 5.511888 CCTTTCTTGCATCCCAATCTTGTTT 60.512 40.000 0.00 0.00 31.91 2.83
2092 2161 1.737236 CTGTGAGACTCTGTCGAGGAG 59.263 57.143 12.18 12.18 41.71 3.69
2173 2243 4.527564 GTGGTGTTCTTCGTTTGAATCTG 58.472 43.478 0.00 0.00 32.61 2.90
2178 2248 0.811281 CTTCGTTTGAATCTGGGGGC 59.189 55.000 0.00 0.00 32.61 5.80
2179 2249 0.404040 TTCGTTTGAATCTGGGGGCT 59.596 50.000 0.00 0.00 0.00 5.19
2199 2269 5.063880 GGCTTATTGTGATTCTAACCGGAT 58.936 41.667 9.46 0.00 0.00 4.18
2206 2276 5.779922 TGTGATTCTAACCGGATAGTATGC 58.220 41.667 17.38 9.60 0.00 3.14
2257 2343 1.009389 GCGCCGGAGAGGATAAATCG 61.009 60.000 10.31 0.00 45.00 3.34
2330 2417 0.389025 GCTTTTGTGTGGACCCTTGG 59.611 55.000 0.00 0.00 0.00 3.61
2468 2564 3.244561 CGCCCCATCCAATCAGTAATAGT 60.245 47.826 0.00 0.00 0.00 2.12
2469 2565 4.020573 CGCCCCATCCAATCAGTAATAGTA 60.021 45.833 0.00 0.00 0.00 1.82
2470 2566 5.512404 CGCCCCATCCAATCAGTAATAGTAA 60.512 44.000 0.00 0.00 0.00 2.24
2471 2567 6.485171 GCCCCATCCAATCAGTAATAGTAAT 58.515 40.000 0.00 0.00 0.00 1.89
2472 2568 7.580688 CGCCCCATCCAATCAGTAATAGTAATA 60.581 40.741 0.00 0.00 0.00 0.98
2473 2569 7.770897 GCCCCATCCAATCAGTAATAGTAATAG 59.229 40.741 0.00 0.00 0.00 1.73
2474 2570 8.267894 CCCCATCCAATCAGTAATAGTAATAGG 58.732 40.741 0.00 0.00 0.00 2.57
2476 2572 8.267894 CCATCCAATCAGTAATAGTAATAGGGG 58.732 40.741 0.00 0.00 0.00 4.79
2478 2574 8.666129 TCCAATCAGTAATAGTAATAGGGGAG 57.334 38.462 0.00 0.00 0.00 4.30
2480 2576 8.754080 CCAATCAGTAATAGTAATAGGGGAGAG 58.246 40.741 0.00 0.00 0.00 3.20
2516 2635 3.433615 AGCAAGCGTGAAATCTTGAGTAC 59.566 43.478 2.99 0.00 41.50 2.73
2518 2637 4.625742 GCAAGCGTGAAATCTTGAGTACTA 59.374 41.667 2.99 0.00 41.50 1.82
2519 2638 5.120208 GCAAGCGTGAAATCTTGAGTACTAA 59.880 40.000 2.99 0.00 41.50 2.24
2520 2639 6.183360 GCAAGCGTGAAATCTTGAGTACTAAT 60.183 38.462 2.99 0.00 41.50 1.73
2523 2642 7.965045 AGCGTGAAATCTTGAGTACTAATTTC 58.035 34.615 17.34 17.34 37.03 2.17
2524 2643 6.895040 GCGTGAAATCTTGAGTACTAATTTCG 59.105 38.462 18.16 13.12 38.54 3.46
2526 2645 7.893236 CGTGAAATCTTGAGTACTAATTTCGTG 59.107 37.037 18.16 13.05 38.54 4.35
2591 2921 9.425577 TGATTAATTATTGTGTGTGTCGTTAGA 57.574 29.630 0.00 0.00 0.00 2.10
2611 2941 4.642429 AGATACGGATTTGGCATTACTCC 58.358 43.478 0.00 0.00 0.00 3.85
2612 2942 4.348168 AGATACGGATTTGGCATTACTCCT 59.652 41.667 0.00 0.00 0.00 3.69
2613 2943 5.542635 AGATACGGATTTGGCATTACTCCTA 59.457 40.000 0.00 0.00 0.00 2.94
2614 2944 3.805207 ACGGATTTGGCATTACTCCTAC 58.195 45.455 0.00 0.00 0.00 3.18
2615 2945 3.454812 ACGGATTTGGCATTACTCCTACT 59.545 43.478 0.00 0.00 0.00 2.57
2616 2946 4.058817 CGGATTTGGCATTACTCCTACTC 58.941 47.826 0.00 0.00 0.00 2.59
2617 2947 4.442893 CGGATTTGGCATTACTCCTACTCA 60.443 45.833 0.00 0.00 0.00 3.41
2618 2948 5.437060 GGATTTGGCATTACTCCTACTCAA 58.563 41.667 0.00 0.00 0.00 3.02
2619 2949 6.064717 GGATTTGGCATTACTCCTACTCAAT 58.935 40.000 0.00 0.00 0.00 2.57
2620 2950 6.547510 GGATTTGGCATTACTCCTACTCAATT 59.452 38.462 0.00 0.00 0.00 2.32
2621 2951 7.719633 GGATTTGGCATTACTCCTACTCAATTA 59.280 37.037 0.00 0.00 0.00 1.40
2622 2952 7.859325 TTTGGCATTACTCCTACTCAATTAC 57.141 36.000 0.00 0.00 0.00 1.89
2623 2953 6.808321 TGGCATTACTCCTACTCAATTACT 57.192 37.500 0.00 0.00 0.00 2.24
2624 2954 6.817184 TGGCATTACTCCTACTCAATTACTC 58.183 40.000 0.00 0.00 0.00 2.59
2625 2955 6.183360 TGGCATTACTCCTACTCAATTACTCC 60.183 42.308 0.00 0.00 0.00 3.85
2626 2956 6.042208 GGCATTACTCCTACTCAATTACTCCT 59.958 42.308 0.00 0.00 0.00 3.69
2627 2957 7.419172 GGCATTACTCCTACTCAATTACTCCTT 60.419 40.741 0.00 0.00 0.00 3.36
2628 2958 7.654116 GCATTACTCCTACTCAATTACTCCTTC 59.346 40.741 0.00 0.00 0.00 3.46
2629 2959 7.657023 TTACTCCTACTCAATTACTCCTTCC 57.343 40.000 0.00 0.00 0.00 3.46
2630 2960 4.645588 ACTCCTACTCAATTACTCCTTCCG 59.354 45.833 0.00 0.00 0.00 4.30
2631 2961 4.607239 TCCTACTCAATTACTCCTTCCGT 58.393 43.478 0.00 0.00 0.00 4.69
2632 2962 5.021458 TCCTACTCAATTACTCCTTCCGTT 58.979 41.667 0.00 0.00 0.00 4.44
2633 2963 5.126707 TCCTACTCAATTACTCCTTCCGTTC 59.873 44.000 0.00 0.00 0.00 3.95
2634 2964 4.203654 ACTCAATTACTCCTTCCGTTCC 57.796 45.455 0.00 0.00 0.00 3.62
2635 2965 3.838903 ACTCAATTACTCCTTCCGTTCCT 59.161 43.478 0.00 0.00 0.00 3.36
2636 2966 5.021458 ACTCAATTACTCCTTCCGTTCCTA 58.979 41.667 0.00 0.00 0.00 2.94
2637 2967 5.482878 ACTCAATTACTCCTTCCGTTCCTAA 59.517 40.000 0.00 0.00 0.00 2.69
2638 2968 6.013984 ACTCAATTACTCCTTCCGTTCCTAAA 60.014 38.462 0.00 0.00 0.00 1.85
2639 2969 6.954232 TCAATTACTCCTTCCGTTCCTAAAT 58.046 36.000 0.00 0.00 0.00 1.40
2640 2970 8.081517 TCAATTACTCCTTCCGTTCCTAAATA 57.918 34.615 0.00 0.00 0.00 1.40
2641 2971 8.711170 TCAATTACTCCTTCCGTTCCTAAATAT 58.289 33.333 0.00 0.00 0.00 1.28
2642 2972 9.338622 CAATTACTCCTTCCGTTCCTAAATATT 57.661 33.333 0.00 0.00 0.00 1.28
2643 2973 9.916360 AATTACTCCTTCCGTTCCTAAATATTT 57.084 29.630 5.89 5.89 0.00 1.40
2644 2974 9.916360 ATTACTCCTTCCGTTCCTAAATATTTT 57.084 29.630 5.91 0.00 0.00 1.82
2645 2975 9.743581 TTACTCCTTCCGTTCCTAAATATTTTT 57.256 29.630 5.91 0.00 0.00 1.94
2646 2976 8.277490 ACTCCTTCCGTTCCTAAATATTTTTC 57.723 34.615 5.91 0.00 0.00 2.29
2647 2977 8.107729 ACTCCTTCCGTTCCTAAATATTTTTCT 58.892 33.333 5.91 0.00 0.00 2.52
2648 2978 8.873186 TCCTTCCGTTCCTAAATATTTTTCTT 57.127 30.769 5.91 0.00 0.00 2.52
2649 2979 9.304335 TCCTTCCGTTCCTAAATATTTTTCTTT 57.696 29.630 5.91 0.00 0.00 2.52
2650 2980 9.569167 CCTTCCGTTCCTAAATATTTTTCTTTC 57.431 33.333 5.91 0.00 0.00 2.62
2678 3008 8.922058 GTCATTTCGACTACATAGGAAGTAAA 57.078 34.615 0.00 0.00 41.81 2.01
2679 3009 9.362539 GTCATTTCGACTACATAGGAAGTAAAA 57.637 33.333 0.00 0.00 41.81 1.52
2683 3013 9.582431 TTTCGACTACATAGGAAGTAAAATGAG 57.418 33.333 0.00 0.00 0.00 2.90
2684 3014 8.289939 TCGACTACATAGGAAGTAAAATGAGT 57.710 34.615 0.00 0.00 0.00 3.41
2685 3015 8.188799 TCGACTACATAGGAAGTAAAATGAGTG 58.811 37.037 0.00 0.00 0.00 3.51
2686 3016 8.188799 CGACTACATAGGAAGTAAAATGAGTGA 58.811 37.037 0.00 0.00 0.00 3.41
2687 3017 9.871238 GACTACATAGGAAGTAAAATGAGTGAA 57.129 33.333 0.00 0.00 0.00 3.18
2694 3024 8.779354 AGGAAGTAAAATGAGTGAATCTACAC 57.221 34.615 0.00 0.00 40.60 2.90
2729 3059 9.671279 ATGTCTACATGTGATAGTCATTTGAAA 57.329 29.630 9.11 0.00 34.83 2.69
2730 3060 9.671279 TGTCTACATGTGATAGTCATTTGAAAT 57.329 29.630 9.11 0.00 0.00 2.17
2731 3061 9.926751 GTCTACATGTGATAGTCATTTGAAATG 57.073 33.333 11.54 11.54 0.00 2.32
2732 3062 8.615211 TCTACATGTGATAGTCATTTGAAATGC 58.385 33.333 12.86 8.33 0.00 3.56
2733 3063 6.567050 ACATGTGATAGTCATTTGAAATGCC 58.433 36.000 12.86 1.61 0.00 4.40
2734 3064 6.379133 ACATGTGATAGTCATTTGAAATGCCT 59.621 34.615 12.86 9.73 0.00 4.75
2735 3065 7.557358 ACATGTGATAGTCATTTGAAATGCCTA 59.443 33.333 10.59 10.59 0.00 3.93
2736 3066 7.558161 TGTGATAGTCATTTGAAATGCCTAG 57.442 36.000 13.20 0.00 0.00 3.02
2737 3067 7.337938 TGTGATAGTCATTTGAAATGCCTAGA 58.662 34.615 13.20 1.78 0.00 2.43
2738 3068 7.828717 TGTGATAGTCATTTGAAATGCCTAGAA 59.171 33.333 13.20 2.99 0.00 2.10
2739 3069 8.677300 GTGATAGTCATTTGAAATGCCTAGAAA 58.323 33.333 13.20 0.91 0.00 2.52
2740 3070 8.896744 TGATAGTCATTTGAAATGCCTAGAAAG 58.103 33.333 13.20 0.00 0.00 2.62
2741 3071 9.113838 GATAGTCATTTGAAATGCCTAGAAAGA 57.886 33.333 13.20 0.00 0.00 2.52
2742 3072 7.150783 AGTCATTTGAAATGCCTAGAAAGAC 57.849 36.000 12.86 3.23 0.00 3.01
2743 3073 6.716628 AGTCATTTGAAATGCCTAGAAAGACA 59.283 34.615 12.86 0.00 0.00 3.41
2744 3074 7.231317 AGTCATTTGAAATGCCTAGAAAGACAA 59.769 33.333 12.86 0.00 0.00 3.18
2745 3075 7.867403 GTCATTTGAAATGCCTAGAAAGACAAA 59.133 33.333 12.86 0.00 0.00 2.83
2746 3076 8.587608 TCATTTGAAATGCCTAGAAAGACAAAT 58.412 29.630 12.86 0.00 36.38 2.32
2747 3077 9.859427 CATTTGAAATGCCTAGAAAGACAAATA 57.141 29.630 4.82 0.00 34.96 1.40
2748 3078 9.860898 ATTTGAAATGCCTAGAAAGACAAATAC 57.139 29.630 0.00 0.00 34.96 1.89
2749 3079 8.635765 TTGAAATGCCTAGAAAGACAAATACT 57.364 30.769 0.00 0.00 0.00 2.12
2750 3080 8.268850 TGAAATGCCTAGAAAGACAAATACTC 57.731 34.615 0.00 0.00 0.00 2.59
2751 3081 7.336931 TGAAATGCCTAGAAAGACAAATACTCC 59.663 37.037 0.00 0.00 0.00 3.85
2752 3082 5.099042 TGCCTAGAAAGACAAATACTCCC 57.901 43.478 0.00 0.00 0.00 4.30
2753 3083 4.783227 TGCCTAGAAAGACAAATACTCCCT 59.217 41.667 0.00 0.00 0.00 4.20
2754 3084 5.104900 TGCCTAGAAAGACAAATACTCCCTC 60.105 44.000 0.00 0.00 0.00 4.30
2755 3085 5.129650 GCCTAGAAAGACAAATACTCCCTCT 59.870 44.000 0.00 0.00 0.00 3.69
2756 3086 6.578023 CCTAGAAAGACAAATACTCCCTCTG 58.422 44.000 0.00 0.00 0.00 3.35
2757 3087 6.155393 CCTAGAAAGACAAATACTCCCTCTGT 59.845 42.308 0.00 0.00 0.00 3.41
2758 3088 7.342284 CCTAGAAAGACAAATACTCCCTCTGTA 59.658 40.741 0.00 0.00 0.00 2.74
2759 3089 7.554959 AGAAAGACAAATACTCCCTCTGTAA 57.445 36.000 0.00 0.00 0.00 2.41
2760 3090 7.974504 AGAAAGACAAATACTCCCTCTGTAAA 58.025 34.615 0.00 0.00 0.00 2.01
2761 3091 7.878644 AGAAAGACAAATACTCCCTCTGTAAAC 59.121 37.037 0.00 0.00 0.00 2.01
2762 3092 6.936968 AGACAAATACTCCCTCTGTAAACT 57.063 37.500 0.00 0.00 0.00 2.66
2763 3093 8.431910 AAGACAAATACTCCCTCTGTAAACTA 57.568 34.615 0.00 0.00 0.00 2.24
2764 3094 8.431910 AGACAAATACTCCCTCTGTAAACTAA 57.568 34.615 0.00 0.00 0.00 2.24
2765 3095 9.047947 AGACAAATACTCCCTCTGTAAACTAAT 57.952 33.333 0.00 0.00 0.00 1.73
2773 3103 9.939424 ACTCCCTCTGTAAACTAATATAAGAGT 57.061 33.333 0.00 0.00 0.00 3.24
2789 3119 8.993404 ATATAAGAGTTAGTTTACGGAGGACT 57.007 34.615 0.00 0.00 0.00 3.85
2791 3121 8.993404 ATAAGAGTTAGTTTACGGAGGACTAT 57.007 34.615 0.00 0.00 0.00 2.12
2792 3122 7.715266 AAGAGTTAGTTTACGGAGGACTATT 57.285 36.000 0.00 0.00 0.00 1.73
2793 3123 7.715266 AGAGTTAGTTTACGGAGGACTATTT 57.285 36.000 0.00 0.00 0.00 1.40
2794 3124 8.814038 AGAGTTAGTTTACGGAGGACTATTTA 57.186 34.615 0.00 0.00 0.00 1.40
2795 3125 8.901793 AGAGTTAGTTTACGGAGGACTATTTAG 58.098 37.037 0.00 0.00 0.00 1.85
2796 3126 8.005192 AGTTAGTTTACGGAGGACTATTTAGG 57.995 38.462 0.00 0.00 0.00 2.69
2797 3127 7.836183 AGTTAGTTTACGGAGGACTATTTAGGA 59.164 37.037 0.00 0.00 0.00 2.94
2798 3128 8.470002 GTTAGTTTACGGAGGACTATTTAGGAA 58.530 37.037 0.00 0.00 0.00 3.36
2799 3129 6.871844 AGTTTACGGAGGACTATTTAGGAAC 58.128 40.000 0.00 0.00 0.00 3.62
2800 3130 5.505173 TTACGGAGGACTATTTAGGAACG 57.495 43.478 0.00 0.00 0.00 3.95
2801 3131 2.692041 ACGGAGGACTATTTAGGAACGG 59.308 50.000 0.00 0.00 0.00 4.44
2802 3132 2.954318 CGGAGGACTATTTAGGAACGGA 59.046 50.000 0.00 0.00 0.00 4.69
2803 3133 3.004524 CGGAGGACTATTTAGGAACGGAG 59.995 52.174 0.00 0.00 0.00 4.63
2804 3134 3.321396 GGAGGACTATTTAGGAACGGAGG 59.679 52.174 0.00 0.00 0.00 4.30
2805 3135 3.306613 AGGACTATTTAGGAACGGAGGG 58.693 50.000 0.00 0.00 0.00 4.30
2806 3136 3.052338 AGGACTATTTAGGAACGGAGGGA 60.052 47.826 0.00 0.00 0.00 4.20
2807 3137 3.321396 GGACTATTTAGGAACGGAGGGAG 59.679 52.174 0.00 0.00 0.00 4.30
2816 3146 3.461085 AGGAACGGAGGGAGTAGTACATA 59.539 47.826 2.52 0.00 0.00 2.29
2823 3153 5.068723 CGGAGGGAGTAGTACATATTGTGTT 59.931 44.000 2.52 0.00 42.29 3.32
2824 3154 6.281405 GGAGGGAGTAGTACATATTGTGTTG 58.719 44.000 2.52 0.00 42.29 3.33
2892 3240 4.657824 CGCGTGGTCCCTCGTGTT 62.658 66.667 11.92 0.00 38.22 3.32
2895 3243 1.082117 GCGTGGTCCCTCGTGTTATG 61.082 60.000 9.27 0.00 35.67 1.90
2992 3469 2.560105 GCCTTGCAAGATTGGAGACTTT 59.440 45.455 28.05 0.00 0.00 2.66
3036 3523 2.203422 TGGGTCCGGCCAGTTTTG 60.203 61.111 15.49 0.00 39.65 2.44
3075 3562 3.307762 GGAGTTCCATGGCTAGTTTGACT 60.308 47.826 6.96 0.58 35.64 3.41
3090 3578 3.338126 GACTCCGCGTGTCATCGGT 62.338 63.158 19.86 1.95 45.44 4.69
3135 3623 3.848272 TTTGCTAAATTCAGGCGGAAG 57.152 42.857 6.20 0.00 39.30 3.46
3158 3646 1.444836 CGGCCAACAGAAATAACCGA 58.555 50.000 2.24 0.00 41.61 4.69
3159 3647 1.396996 CGGCCAACAGAAATAACCGAG 59.603 52.381 2.24 0.00 41.61 4.63
3161 3649 1.743394 GCCAACAGAAATAACCGAGGG 59.257 52.381 0.00 0.00 0.00 4.30
3162 3650 2.878526 GCCAACAGAAATAACCGAGGGT 60.879 50.000 0.00 0.00 37.65 4.34
3163 3651 3.620472 GCCAACAGAAATAACCGAGGGTA 60.620 47.826 0.00 0.00 33.12 3.69
3164 3652 3.937079 CCAACAGAAATAACCGAGGGTAC 59.063 47.826 0.00 0.00 33.12 3.34
3165 3653 4.323257 CCAACAGAAATAACCGAGGGTACT 60.323 45.833 0.00 0.00 33.12 2.73
3166 3654 5.105228 CCAACAGAAATAACCGAGGGTACTA 60.105 44.000 0.00 0.00 33.12 1.82
3167 3655 5.848833 ACAGAAATAACCGAGGGTACTAG 57.151 43.478 0.00 0.00 33.12 2.57
3168 3656 5.267587 ACAGAAATAACCGAGGGTACTAGT 58.732 41.667 0.00 0.00 33.12 2.57
3169 3657 6.426587 ACAGAAATAACCGAGGGTACTAGTA 58.573 40.000 0.00 0.00 33.12 1.82
3202 3690 6.361214 GTGGAAATTAACGCGAAGATTGAAAA 59.639 34.615 15.93 0.00 0.00 2.29
3207 3695 2.218603 ACGCGAAGATTGAAAACTGGT 58.781 42.857 15.93 0.00 0.00 4.00
3292 3780 0.464735 AAGTGGTGCGTGTGCCTTTA 60.465 50.000 0.00 0.00 41.78 1.85
3306 3794 1.870993 GCCTTTAACGTGTCAGTCCGT 60.871 52.381 0.00 0.00 39.32 4.69
3401 3894 1.982395 CCGCAGTGACCACTCCCTA 60.982 63.158 0.00 0.00 40.20 3.53
3406 3899 0.323542 AGTGACCACTCCCTAGTCCG 60.324 60.000 0.00 0.00 36.92 4.79
3483 3976 1.021920 GGGCTGCGACTTCTTTCCTC 61.022 60.000 0.00 0.00 0.00 3.71
3492 3987 4.495184 GCGACTTCTTTCCTCAAAACGAAA 60.495 41.667 0.00 0.00 0.00 3.46
3505 4000 6.128526 CCTCAAAACGAAATCCAACTCTACTC 60.129 42.308 0.00 0.00 0.00 2.59
3506 4001 6.522054 TCAAAACGAAATCCAACTCTACTCT 58.478 36.000 0.00 0.00 0.00 3.24
3511 4006 8.522542 AACGAAATCCAACTCTACTCTAGTAT 57.477 34.615 0.00 0.00 0.00 2.12
3512 4007 9.624373 AACGAAATCCAACTCTACTCTAGTATA 57.376 33.333 0.00 0.00 0.00 1.47
3513 4008 9.624373 ACGAAATCCAACTCTACTCTAGTATAA 57.376 33.333 0.00 0.00 0.00 0.98
3514 4009 9.881529 CGAAATCCAACTCTACTCTAGTATAAC 57.118 37.037 0.00 0.00 0.00 1.89
3520 4015 9.492973 CCAACTCTACTCTAGTATAACTACTCC 57.507 40.741 0.00 0.00 39.04 3.85
3524 4019 9.933723 CTCTACTCTAGTATAACTACTCCTTCC 57.066 40.741 0.00 0.00 39.04 3.46
3525 4020 8.584157 TCTACTCTAGTATAACTACTCCTTCCG 58.416 40.741 0.00 0.00 39.04 4.30
3526 4021 7.372260 ACTCTAGTATAACTACTCCTTCCGA 57.628 40.000 0.00 0.00 39.04 4.55
3527 4022 7.976712 ACTCTAGTATAACTACTCCTTCCGAT 58.023 38.462 0.00 0.00 39.04 4.18
3528 4023 8.096414 ACTCTAGTATAACTACTCCTTCCGATC 58.904 40.741 0.00 0.00 39.04 3.69
3529 4024 7.095910 TCTAGTATAACTACTCCTTCCGATCG 58.904 42.308 8.51 8.51 39.04 3.69
3530 4025 5.002516 AGTATAACTACTCCTTCCGATCGG 58.997 45.833 28.62 28.62 32.56 4.18
3531 4026 2.431954 AACTACTCCTTCCGATCGGA 57.568 50.000 32.59 32.59 43.52 4.55
3532 4027 6.689946 AGTATAACTACTCCTTCCGATCGGAA 60.690 42.308 39.28 39.28 41.70 4.30
3533 4028 7.962979 AGTATAACTACTCCTTCCGATCGGAAT 60.963 40.741 41.27 30.77 42.37 3.01
3547 4042 8.896320 TCCGATCGGAATTATTTATCTCAAAA 57.104 30.769 33.96 4.81 42.05 2.44
3548 4043 9.332502 TCCGATCGGAATTATTTATCTCAAAAA 57.667 29.630 33.96 4.45 42.05 1.94
3596 4091 8.298729 ACATCTAGATATATCCATTTCTGCGA 57.701 34.615 4.54 0.00 0.00 5.10
3597 4092 8.194104 ACATCTAGATATATCCATTTCTGCGAC 58.806 37.037 4.54 0.00 0.00 5.19
3598 4093 6.786207 TCTAGATATATCCATTTCTGCGACG 58.214 40.000 9.18 0.00 0.00 5.12
3599 4094 5.644977 AGATATATCCATTTCTGCGACGA 57.355 39.130 9.18 0.00 0.00 4.20
3600 4095 5.645624 AGATATATCCATTTCTGCGACGAG 58.354 41.667 9.18 0.00 0.00 4.18
3601 4096 3.735237 ATATCCATTTCTGCGACGAGT 57.265 42.857 0.00 0.00 0.00 4.18
3602 4097 4.848562 ATATCCATTTCTGCGACGAGTA 57.151 40.909 0.00 0.00 0.00 2.59
3603 4098 3.520290 ATCCATTTCTGCGACGAGTAA 57.480 42.857 0.00 0.00 0.00 2.24
3604 4099 3.520290 TCCATTTCTGCGACGAGTAAT 57.480 42.857 0.00 0.00 0.00 1.89
3605 4100 3.857052 TCCATTTCTGCGACGAGTAATT 58.143 40.909 0.00 0.00 0.00 1.40
3606 4101 3.863424 TCCATTTCTGCGACGAGTAATTC 59.137 43.478 0.00 0.00 0.00 2.17
3607 4102 3.001330 CCATTTCTGCGACGAGTAATTCC 59.999 47.826 0.00 0.00 0.00 3.01
3608 4103 1.904144 TTCTGCGACGAGTAATTCCG 58.096 50.000 0.00 0.00 0.00 4.30
3616 4111 3.002042 CGACGAGTAATTCCGAGCTTCTA 59.998 47.826 0.00 0.00 0.00 2.10
3638 4133 4.376225 AAAAATTACTCCCTTCGTCCCA 57.624 40.909 0.00 0.00 0.00 4.37
3639 4134 4.586306 AAAATTACTCCCTTCGTCCCAT 57.414 40.909 0.00 0.00 0.00 4.00
3640 4135 5.703730 AAAATTACTCCCTTCGTCCCATA 57.296 39.130 0.00 0.00 0.00 2.74
3641 4136 5.703730 AAATTACTCCCTTCGTCCCATAA 57.296 39.130 0.00 0.00 0.00 1.90
3642 4137 5.906772 AATTACTCCCTTCGTCCCATAAT 57.093 39.130 0.00 0.00 0.00 1.28
3643 4138 7.383156 AAATTACTCCCTTCGTCCCATAATA 57.617 36.000 0.00 0.00 0.00 0.98
3644 4139 7.569599 AATTACTCCCTTCGTCCCATAATAT 57.430 36.000 0.00 0.00 0.00 1.28
3645 4140 8.674925 AATTACTCCCTTCGTCCCATAATATA 57.325 34.615 0.00 0.00 0.00 0.86
3646 4141 8.674925 ATTACTCCCTTCGTCCCATAATATAA 57.325 34.615 0.00 0.00 0.00 0.98
3647 4142 6.607004 ACTCCCTTCGTCCCATAATATAAG 57.393 41.667 0.00 0.00 0.00 1.73
3648 4143 6.320518 ACTCCCTTCGTCCCATAATATAAGA 58.679 40.000 0.00 0.00 0.00 2.10
3649 4144 6.785963 ACTCCCTTCGTCCCATAATATAAGAA 59.214 38.462 0.00 0.00 0.00 2.52
3650 4145 7.001099 TCCCTTCGTCCCATAATATAAGAAC 57.999 40.000 0.00 0.00 0.00 3.01
3651 4146 6.013984 TCCCTTCGTCCCATAATATAAGAACC 60.014 42.308 0.00 0.00 0.00 3.62
3652 4147 6.013639 CCCTTCGTCCCATAATATAAGAACCT 60.014 42.308 0.00 0.00 0.00 3.50
3653 4148 7.450903 CCTTCGTCCCATAATATAAGAACCTT 58.549 38.462 0.00 0.00 0.00 3.50
3654 4149 7.937394 CCTTCGTCCCATAATATAAGAACCTTT 59.063 37.037 0.00 0.00 0.00 3.11
3655 4150 9.338622 CTTCGTCCCATAATATAAGAACCTTTT 57.661 33.333 0.00 0.00 0.00 2.27
3656 4151 9.689501 TTCGTCCCATAATATAAGAACCTTTTT 57.310 29.630 0.00 0.00 0.00 1.94
3697 4192 5.897377 AAAACAATCTTATTGGGACGGAG 57.103 39.130 4.78 0.00 0.00 4.63
3698 4193 3.560636 ACAATCTTATTGGGACGGAGG 57.439 47.619 4.78 0.00 0.00 4.30
3699 4194 2.172717 ACAATCTTATTGGGACGGAGGG 59.827 50.000 4.78 0.00 0.00 4.30
3700 4195 2.438021 CAATCTTATTGGGACGGAGGGA 59.562 50.000 0.00 0.00 0.00 4.20
3701 4196 1.789523 TCTTATTGGGACGGAGGGAG 58.210 55.000 0.00 0.00 0.00 4.30
3704 4199 3.116862 TCTTATTGGGACGGAGGGAGTAT 60.117 47.826 0.00 0.00 0.00 2.12
3714 4209 4.070716 ACGGAGGGAGTATTACTCGTATG 58.929 47.826 15.81 8.36 45.96 2.39
3754 4258 3.490078 GCTAGTAGCAGCTGTCTCGATTT 60.490 47.826 17.47 1.48 41.89 2.17
3773 4277 5.401376 CGATTTCTTTGCATTGCATCTATGG 59.599 40.000 12.95 0.71 38.76 2.74
3776 4280 4.476297 TCTTTGCATTGCATCTATGGGAT 58.524 39.130 12.95 0.00 38.76 3.85
3852 4361 5.824624 GTGATTCCTTGGATCTTGCATCTTA 59.175 40.000 0.00 0.00 0.00 2.10
3862 4371 3.031013 TCTTGCATCTTACCGAGATCCA 58.969 45.455 0.00 0.00 43.32 3.41
3867 4376 5.019470 TGCATCTTACCGAGATCCATCTAT 58.981 41.667 0.00 0.00 43.32 1.98
3935 4444 2.969628 TCTCGATTTTCCTGGAGCTC 57.030 50.000 4.71 4.71 0.00 4.09
4028 4537 3.256631 GCCACTTGATGTTTGACCTCAAT 59.743 43.478 0.45 0.00 33.44 2.57
4038 4547 5.005740 TGTTTGACCTCAATGAAGATCCAG 58.994 41.667 0.00 0.00 35.55 3.86
4039 4548 5.221904 TGTTTGACCTCAATGAAGATCCAGA 60.222 40.000 0.00 0.00 35.55 3.86
4057 4566 4.155733 CATGGCGGCGGAGTGGTA 62.156 66.667 9.78 0.00 0.00 3.25
4072 4588 0.395862 TGGTAAGAGGCGAGGAGGAG 60.396 60.000 0.00 0.00 0.00 3.69
4110 4628 1.741770 CTAGTTGGTGTGCTCGGGC 60.742 63.158 0.00 0.00 39.26 6.13
4134 4652 0.983467 TCAACCCAGCTGCTCATGTA 59.017 50.000 8.66 0.00 0.00 2.29
4135 4653 1.089920 CAACCCAGCTGCTCATGTAC 58.910 55.000 8.66 0.00 0.00 2.90
4137 4655 0.914644 ACCCAGCTGCTCATGTACAT 59.085 50.000 8.66 1.41 0.00 2.29
4143 4664 3.562973 CAGCTGCTCATGTACATAAAGGG 59.437 47.826 8.32 0.00 0.00 3.95
4144 4665 2.291741 GCTGCTCATGTACATAAAGGGC 59.708 50.000 8.32 8.78 0.00 5.19
4163 4684 2.626840 GCAAGCCAGTAGAAGAAGAGG 58.373 52.381 0.00 0.00 0.00 3.69
4164 4685 2.679349 GCAAGCCAGTAGAAGAAGAGGG 60.679 54.545 0.00 0.00 0.00 4.30
4165 4686 2.569404 CAAGCCAGTAGAAGAAGAGGGT 59.431 50.000 0.00 0.00 0.00 4.34
4167 4688 1.208293 GCCAGTAGAAGAAGAGGGTGG 59.792 57.143 0.00 0.00 0.00 4.61
4168 4689 2.821437 CCAGTAGAAGAAGAGGGTGGA 58.179 52.381 0.00 0.00 0.00 4.02
4169 4690 3.379452 CCAGTAGAAGAAGAGGGTGGAT 58.621 50.000 0.00 0.00 0.00 3.41
4170 4691 3.777522 CCAGTAGAAGAAGAGGGTGGATT 59.222 47.826 0.00 0.00 0.00 3.01
4171 4692 4.962995 CCAGTAGAAGAAGAGGGTGGATTA 59.037 45.833 0.00 0.00 0.00 1.75
4172 4693 5.425539 CCAGTAGAAGAAGAGGGTGGATTAA 59.574 44.000 0.00 0.00 0.00 1.40
4212 4735 2.169330 GGGGCTTAGAGGGTATACTCG 58.831 57.143 2.25 0.00 42.31 4.18
4486 5214 7.427989 AGGAGGATTTACAGTCCGTTTAATA 57.572 36.000 0.00 0.00 40.76 0.98
4509 5237 8.779354 ATAGAATTATTGATTTAGAGACCGGC 57.221 34.615 0.00 0.00 0.00 6.13
4510 5238 6.591935 AGAATTATTGATTTAGAGACCGGCA 58.408 36.000 0.00 0.00 0.00 5.69
4511 5239 7.227156 AGAATTATTGATTTAGAGACCGGCAT 58.773 34.615 0.00 0.00 0.00 4.40
4512 5240 7.721399 AGAATTATTGATTTAGAGACCGGCATT 59.279 33.333 0.00 0.00 0.00 3.56
4513 5241 8.918202 AATTATTGATTTAGAGACCGGCATTA 57.082 30.769 0.00 0.00 0.00 1.90
4514 5242 7.962964 TTATTGATTTAGAGACCGGCATTAG 57.037 36.000 0.00 0.00 0.00 1.73
4518 5246 4.660789 TTTAGAGACCGGCATTAGTACC 57.339 45.455 0.00 0.00 0.00 3.34
4528 5256 6.710278 ACCGGCATTAGTACCTTTTAGTTTA 58.290 36.000 0.00 0.00 0.00 2.01
4582 5313 7.308951 CCCGTCCACTTTTTCTGTACAATAAAT 60.309 37.037 0.00 0.00 0.00 1.40
4615 5346 9.968870 TTTACATGAACCTGTTTATTTGGTTAC 57.031 29.630 0.00 0.00 43.28 2.50
4617 5348 8.927675 ACATGAACCTGTTTATTTGGTTACTA 57.072 30.769 0.00 0.00 43.28 1.82
4654 5700 4.789012 ATGAAATGGTTTAGCACTGTGG 57.211 40.909 10.21 0.00 0.00 4.17
4669 5715 1.903404 GTGGTTGACTTGGCTGGGG 60.903 63.158 0.00 0.00 0.00 4.96
4673 5719 1.531365 TTGACTTGGCTGGGGCTTG 60.531 57.895 0.00 0.00 38.73 4.01
4693 5739 1.013596 TTGTGACTTGTGAGCCGTTG 58.986 50.000 0.00 0.00 0.00 4.10
4759 5805 1.000771 GCCACTTTCTCCTTCCCCC 60.001 63.158 0.00 0.00 0.00 5.40
4760 5806 1.501654 GCCACTTTCTCCTTCCCCCT 61.502 60.000 0.00 0.00 0.00 4.79
4784 5830 2.577059 CTGTAAGCTTCGCCCGGA 59.423 61.111 0.73 0.00 0.00 5.14
4785 5831 1.144057 CTGTAAGCTTCGCCCGGAT 59.856 57.895 0.73 0.00 0.00 4.18
4786 5832 0.462047 CTGTAAGCTTCGCCCGGATT 60.462 55.000 0.73 0.00 0.00 3.01
4792 5838 1.134220 AGCTTCGCCCGGATTCATTAA 60.134 47.619 0.73 0.00 0.00 1.40
4797 9786 0.310854 GCCCGGATTCATTAAAGGCG 59.689 55.000 0.73 0.00 0.00 5.52
4799 9788 2.021457 CCCGGATTCATTAAAGGCGTT 58.979 47.619 0.73 0.00 0.00 4.84
4873 9888 7.827729 AGAAGGGTTGTTTAATTAAGCGTCTAT 59.172 33.333 7.44 0.00 0.00 1.98
4878 9893 8.758715 GGTTGTTTAATTAAGCGTCTATCGTAT 58.241 33.333 7.44 0.00 42.13 3.06
4890 9905 5.285607 GCGTCTATCGTATACAAATAGGCAC 59.714 44.000 19.23 10.99 42.13 5.01
4911 9926 4.756642 CACCAGTGCTTATGAAAAGACTGA 59.243 41.667 0.00 0.00 34.06 3.41
4952 9969 5.878669 CCTCCCTAAACACCTTACATTGTAC 59.121 44.000 0.00 0.00 0.00 2.90
4953 9970 6.296259 CCTCCCTAAACACCTTACATTGTACT 60.296 42.308 0.00 0.00 0.00 2.73
4954 9971 6.704310 TCCCTAAACACCTTACATTGTACTC 58.296 40.000 0.00 0.00 0.00 2.59
4955 9972 5.878669 CCCTAAACACCTTACATTGTACTCC 59.121 44.000 0.00 0.00 0.00 3.85
4956 9973 5.878669 CCTAAACACCTTACATTGTACTCCC 59.121 44.000 0.00 0.00 0.00 4.30
4957 9974 5.578157 AAACACCTTACATTGTACTCCCT 57.422 39.130 0.00 0.00 0.00 4.20
4958 9975 4.820894 ACACCTTACATTGTACTCCCTC 57.179 45.455 0.00 0.00 0.00 4.30
4959 9976 3.518303 ACACCTTACATTGTACTCCCTCC 59.482 47.826 0.00 0.00 0.00 4.30
4960 9977 2.764572 ACCTTACATTGTACTCCCTCCG 59.235 50.000 0.00 0.00 0.00 4.63
4961 9978 2.764572 CCTTACATTGTACTCCCTCCGT 59.235 50.000 0.00 0.00 0.00 4.69
4962 9979 3.956199 CCTTACATTGTACTCCCTCCGTA 59.044 47.826 0.00 0.00 0.00 4.02
4963 9980 4.403432 CCTTACATTGTACTCCCTCCGTAA 59.597 45.833 0.00 0.00 0.00 3.18
4964 9981 5.105228 CCTTACATTGTACTCCCTCCGTAAA 60.105 44.000 0.00 0.00 0.00 2.01
4965 9982 4.198028 ACATTGTACTCCCTCCGTAAAC 57.802 45.455 0.00 0.00 0.00 2.01
4966 9983 3.836562 ACATTGTACTCCCTCCGTAAACT 59.163 43.478 0.00 0.00 0.00 2.66
4967 9984 5.018809 ACATTGTACTCCCTCCGTAAACTA 58.981 41.667 0.00 0.00 0.00 2.24
4968 9985 5.481473 ACATTGTACTCCCTCCGTAAACTAA 59.519 40.000 0.00 0.00 0.00 2.24
4969 9986 6.155737 ACATTGTACTCCCTCCGTAAACTAAT 59.844 38.462 0.00 0.00 0.00 1.73
4970 9987 7.342799 ACATTGTACTCCCTCCGTAAACTAATA 59.657 37.037 0.00 0.00 0.00 0.98
4971 9988 7.902920 TTGTACTCCCTCCGTAAACTAATAT 57.097 36.000 0.00 0.00 0.00 1.28
4972 9989 8.995027 TTGTACTCCCTCCGTAAACTAATATA 57.005 34.615 0.00 0.00 0.00 0.86
4973 9990 8.995027 TGTACTCCCTCCGTAAACTAATATAA 57.005 34.615 0.00 0.00 0.00 0.98
4974 9991 9.420118 TGTACTCCCTCCGTAAACTAATATAAA 57.580 33.333 0.00 0.00 0.00 1.40
4977 9994 9.605275 ACTCCCTCCGTAAACTAATATAAAAAC 57.395 33.333 0.00 0.00 0.00 2.43
4978 9995 8.647143 TCCCTCCGTAAACTAATATAAAAACG 57.353 34.615 0.00 0.00 0.00 3.60
4979 9996 8.257306 TCCCTCCGTAAACTAATATAAAAACGT 58.743 33.333 0.00 0.00 0.00 3.99
4980 9997 8.882736 CCCTCCGTAAACTAATATAAAAACGTT 58.117 33.333 0.00 0.00 0.00 3.99
5014 10031 9.733556 TTACTTTAGTGAAGATAGAATTTGGCA 57.266 29.630 0.99 0.00 38.77 4.92
5015 10032 8.273780 ACTTTAGTGAAGATAGAATTTGGCAG 57.726 34.615 0.99 0.00 38.77 4.85
5016 10033 7.885399 ACTTTAGTGAAGATAGAATTTGGCAGT 59.115 33.333 0.99 0.00 38.77 4.40
5017 10034 9.383519 CTTTAGTGAAGATAGAATTTGGCAGTA 57.616 33.333 0.00 0.00 37.57 2.74
5018 10035 9.905713 TTTAGTGAAGATAGAATTTGGCAGTAT 57.094 29.630 0.00 0.00 0.00 2.12
5020 10037 8.894768 AGTGAAGATAGAATTTGGCAGTATAC 57.105 34.615 0.00 0.00 0.00 1.47
5021 10038 8.486210 AGTGAAGATAGAATTTGGCAGTATACA 58.514 33.333 5.50 0.00 0.00 2.29
5022 10039 8.768955 GTGAAGATAGAATTTGGCAGTATACAG 58.231 37.037 5.50 0.00 0.00 2.74
5023 10040 8.704668 TGAAGATAGAATTTGGCAGTATACAGA 58.295 33.333 5.50 0.00 0.00 3.41
5024 10041 9.202273 GAAGATAGAATTTGGCAGTATACAGAG 57.798 37.037 5.50 0.00 0.00 3.35
5025 10042 7.675062 AGATAGAATTTGGCAGTATACAGAGG 58.325 38.462 5.50 0.00 0.00 3.69
5026 10043 5.041191 AGAATTTGGCAGTATACAGAGGG 57.959 43.478 5.50 0.00 0.00 4.30
5027 10044 4.721776 AGAATTTGGCAGTATACAGAGGGA 59.278 41.667 5.50 0.00 0.00 4.20
5028 10045 4.696479 ATTTGGCAGTATACAGAGGGAG 57.304 45.455 5.50 0.00 0.00 4.30
5029 10046 2.848678 TGGCAGTATACAGAGGGAGT 57.151 50.000 5.50 0.00 0.00 3.85
5030 10047 3.965470 TGGCAGTATACAGAGGGAGTA 57.035 47.619 5.50 0.00 0.00 2.59
5039 10056 8.788806 CAGTATACAGAGGGAGTATAAGACTTG 58.211 40.741 5.50 0.00 39.06 3.16
5097 10119 8.250332 TCAGGAAGTAAAACATTTAATGGATGC 58.750 33.333 9.88 0.00 33.60 3.91
5175 10197 4.394610 GTCCACAAACAAGCAAAATTTGGT 59.605 37.500 4.40 4.40 44.43 3.67
5176 10198 4.394300 TCCACAAACAAGCAAAATTTGGTG 59.606 37.500 11.36 8.19 41.89 4.17
5232 10255 8.753497 TTAACTTTGGGTTTTTGCCATTAAAT 57.247 26.923 0.00 0.00 39.17 1.40
5260 10283 6.261158 TGTTATTTGTTTCACGAGACATCCAA 59.739 34.615 0.00 0.00 0.00 3.53
5278 10301 6.152323 ACATCCAACATCTCAAAAGAGAATGG 59.848 38.462 14.24 14.24 36.08 3.16
5313 10336 6.128363 CCGTCTACCTTTCCAATCTTGTTTAC 60.128 42.308 0.00 0.00 0.00 2.01
5381 10405 4.634443 AGTTTACAACAGTCACTTGTGGTC 59.366 41.667 0.64 0.00 36.62 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 7.561021 TTACACAATGCAGTTTTCTTGTCTA 57.439 32.000 0.00 0.00 29.74 2.59
221 222 9.597681 AGGAATTATGCCTCAATGAAGATTATT 57.402 29.630 0.00 0.00 0.00 1.40
299 301 1.202099 TAGGGTTTCATGGCGGTGGA 61.202 55.000 0.00 0.00 0.00 4.02
300 302 0.748005 CTAGGGTTTCATGGCGGTGG 60.748 60.000 0.00 0.00 0.00 4.61
343 346 4.040829 TCATGCTGATCAGGGGTTAGTATG 59.959 45.833 23.89 11.80 34.25 2.39
355 358 3.118261 GGTTAGGGTTCTCATGCTGATCA 60.118 47.826 0.00 0.00 0.00 2.92
434 437 0.034960 GAGTTTTCCCAGCCCTCTCC 60.035 60.000 0.00 0.00 0.00 3.71
468 481 2.473760 CCATCTCGGCGTCTCGTCT 61.474 63.158 6.85 0.00 0.00 4.18
478 491 0.830648 TAGGGTTTCTGCCATCTCGG 59.169 55.000 0.00 0.00 38.11 4.63
546 585 5.118357 GCATTTCGCTCTCATGTATCTGTAG 59.882 44.000 0.00 0.00 37.77 2.74
632 675 2.034558 CCCTGCTTATTTTATGGCACGG 59.965 50.000 0.00 0.00 0.00 4.94
633 676 2.543653 GCCCTGCTTATTTTATGGCACG 60.544 50.000 0.00 0.00 37.36 5.34
645 690 2.740580 GCGTTGTATAGTGCCCTGCTTA 60.741 50.000 0.00 0.00 0.00 3.09
919 964 3.984186 TTGGGCGAGGAGGAGGAGG 62.984 68.421 0.00 0.00 0.00 4.30
1199 1244 3.723348 GCAAGGTCGTTGGACGGC 61.723 66.667 7.35 0.00 46.91 5.68
1250 1295 3.760035 GGAAGCTCGTCCTCCGCA 61.760 66.667 0.00 0.00 34.56 5.69
1373 1418 1.260538 ATCTGGCGAGAACAGGCTCA 61.261 55.000 1.37 0.00 36.62 4.26
1655 1700 3.793144 GTTGCCTGCGCCTTCTCG 61.793 66.667 4.18 0.00 0.00 4.04
1656 1701 3.793144 CGTTGCCTGCGCCTTCTC 61.793 66.667 4.18 0.00 0.00 2.87
1914 1959 1.209127 CAAGTTTAACCGCGCCTGG 59.791 57.895 0.00 0.00 0.00 4.45
1957 2005 1.201965 GCAAGGAATGAGAAAGCGACG 60.202 52.381 0.00 0.00 0.00 5.12
1958 2006 1.201965 CGCAAGGAATGAGAAAGCGAC 60.202 52.381 0.00 0.00 45.78 5.19
1973 2021 1.266891 GCGAGACGAATAAACCGCAAG 60.267 52.381 0.00 0.00 41.89 4.01
2022 2070 2.482721 ACGCGACTTAAACAAGATTGGG 59.517 45.455 15.93 0.00 0.00 4.12
2034 2082 0.442310 GCTGCAATTCACGCGACTTA 59.558 50.000 15.93 0.00 0.00 2.24
2092 2161 2.812358 AAAATCACGGCAAAGGAACC 57.188 45.000 0.00 0.00 0.00 3.62
2132 2202 0.162933 CGCCACACGTATGAACACAC 59.837 55.000 0.00 0.00 36.87 3.82
2173 2243 3.889538 GGTTAGAATCACAATAAGCCCCC 59.110 47.826 0.00 0.00 0.00 5.40
2179 2249 9.923143 CATACTATCCGGTTAGAATCACAATAA 57.077 33.333 23.43 0.00 0.00 1.40
2199 2269 1.144298 TCCTCTACCCAGCGCATACTA 59.856 52.381 11.47 0.00 0.00 1.82
2206 2276 0.757188 ACTCCATCCTCTACCCAGCG 60.757 60.000 0.00 0.00 0.00 5.18
2257 2343 1.464997 GTCCGTTGCCAGAGAATGAAC 59.535 52.381 0.00 0.00 0.00 3.18
2383 2470 2.183679 CTCCATCTATCTACCCTGCCC 58.816 57.143 0.00 0.00 0.00 5.36
2468 2564 8.315220 ACTTCGTATTTTTCTCTCCCCTATTA 57.685 34.615 0.00 0.00 0.00 0.98
2469 2565 7.196637 ACTTCGTATTTTTCTCTCCCCTATT 57.803 36.000 0.00 0.00 0.00 1.73
2470 2566 6.809976 ACTTCGTATTTTTCTCTCCCCTAT 57.190 37.500 0.00 0.00 0.00 2.57
2471 2567 6.183360 GCTACTTCGTATTTTTCTCTCCCCTA 60.183 42.308 0.00 0.00 0.00 3.53
2472 2568 5.395435 GCTACTTCGTATTTTTCTCTCCCCT 60.395 44.000 0.00 0.00 0.00 4.79
2473 2569 4.809958 GCTACTTCGTATTTTTCTCTCCCC 59.190 45.833 0.00 0.00 0.00 4.81
2474 2570 5.416947 TGCTACTTCGTATTTTTCTCTCCC 58.583 41.667 0.00 0.00 0.00 4.30
2476 2572 6.470999 GCTTGCTACTTCGTATTTTTCTCTC 58.529 40.000 0.00 0.00 0.00 3.20
2478 2574 5.163982 ACGCTTGCTACTTCGTATTTTTCTC 60.164 40.000 0.00 0.00 33.02 2.87
2480 2576 4.781528 CACGCTTGCTACTTCGTATTTTTC 59.218 41.667 0.00 0.00 33.51 2.29
2486 2605 2.710220 TTCACGCTTGCTACTTCGTA 57.290 45.000 0.00 0.00 33.51 3.43
2488 2607 2.668457 AGATTTCACGCTTGCTACTTCG 59.332 45.455 0.00 0.00 0.00 3.79
2493 2612 3.664107 ACTCAAGATTTCACGCTTGCTA 58.336 40.909 0.00 0.00 40.89 3.49
2516 2635 6.566427 CGCAATAATCGACTTCACGAAATTAG 59.434 38.462 0.00 0.00 45.16 1.73
2518 2637 5.255596 CGCAATAATCGACTTCACGAAATT 58.744 37.500 0.00 0.00 45.16 1.82
2519 2638 4.260212 CCGCAATAATCGACTTCACGAAAT 60.260 41.667 0.00 0.00 45.16 2.17
2520 2639 3.061563 CCGCAATAATCGACTTCACGAAA 59.938 43.478 0.00 0.00 45.16 3.46
2523 2642 1.257936 CCCGCAATAATCGACTTCACG 59.742 52.381 0.00 0.00 0.00 4.35
2524 2643 1.597663 CCCCGCAATAATCGACTTCAC 59.402 52.381 0.00 0.00 0.00 3.18
2526 2645 1.949465 ACCCCGCAATAATCGACTTC 58.051 50.000 0.00 0.00 0.00 3.01
2591 2921 4.706842 AGGAGTAATGCCAAATCCGTAT 57.293 40.909 0.00 0.00 35.13 3.06
2593 2923 3.454812 AGTAGGAGTAATGCCAAATCCGT 59.545 43.478 0.00 0.00 35.13 4.69
2603 2933 8.145122 GGAAGGAGTAATTGAGTAGGAGTAATG 58.855 40.741 0.00 0.00 0.00 1.90
2611 2941 5.127356 AGGAACGGAAGGAGTAATTGAGTAG 59.873 44.000 0.00 0.00 0.00 2.57
2612 2942 5.021458 AGGAACGGAAGGAGTAATTGAGTA 58.979 41.667 0.00 0.00 0.00 2.59
2613 2943 3.838903 AGGAACGGAAGGAGTAATTGAGT 59.161 43.478 0.00 0.00 0.00 3.41
2614 2944 4.473477 AGGAACGGAAGGAGTAATTGAG 57.527 45.455 0.00 0.00 0.00 3.02
2615 2945 6.363167 TTTAGGAACGGAAGGAGTAATTGA 57.637 37.500 0.00 0.00 0.00 2.57
2616 2946 8.904099 ATATTTAGGAACGGAAGGAGTAATTG 57.096 34.615 0.00 0.00 0.00 2.32
2617 2947 9.916360 AAATATTTAGGAACGGAAGGAGTAATT 57.084 29.630 0.00 0.00 0.00 1.40
2618 2948 9.916360 AAAATATTTAGGAACGGAAGGAGTAAT 57.084 29.630 0.01 0.00 0.00 1.89
2619 2949 9.743581 AAAAATATTTAGGAACGGAAGGAGTAA 57.256 29.630 0.01 0.00 0.00 2.24
2620 2950 9.387257 GAAAAATATTTAGGAACGGAAGGAGTA 57.613 33.333 0.01 0.00 0.00 2.59
2621 2951 8.107729 AGAAAAATATTTAGGAACGGAAGGAGT 58.892 33.333 0.01 0.00 0.00 3.85
2622 2952 8.507524 AGAAAAATATTTAGGAACGGAAGGAG 57.492 34.615 0.01 0.00 0.00 3.69
2623 2953 8.873186 AAGAAAAATATTTAGGAACGGAAGGA 57.127 30.769 0.01 0.00 0.00 3.36
2624 2954 9.569167 GAAAGAAAAATATTTAGGAACGGAAGG 57.431 33.333 0.01 0.00 0.00 3.46
2657 2987 9.582431 CTCATTTTACTTCCTATGTAGTCGAAA 57.418 33.333 0.00 0.00 0.00 3.46
2658 2988 8.746530 ACTCATTTTACTTCCTATGTAGTCGAA 58.253 33.333 0.00 0.00 0.00 3.71
2659 2989 8.188799 CACTCATTTTACTTCCTATGTAGTCGA 58.811 37.037 0.00 0.00 0.00 4.20
2660 2990 8.188799 TCACTCATTTTACTTCCTATGTAGTCG 58.811 37.037 0.00 0.00 0.00 4.18
2661 2991 9.871238 TTCACTCATTTTACTTCCTATGTAGTC 57.129 33.333 0.00 0.00 0.00 2.59
2668 2998 9.871238 GTGTAGATTCACTCATTTTACTTCCTA 57.129 33.333 0.00 0.00 35.68 2.94
2669 2999 8.598041 AGTGTAGATTCACTCATTTTACTTCCT 58.402 33.333 0.00 0.00 44.07 3.36
2670 3000 8.779354 AGTGTAGATTCACTCATTTTACTTCC 57.221 34.615 0.00 0.00 44.07 3.46
2703 3033 9.671279 TTTCAAATGACTATCACATGTAGACAT 57.329 29.630 0.00 2.05 36.56 3.06
2704 3034 9.671279 ATTTCAAATGACTATCACATGTAGACA 57.329 29.630 0.00 0.00 0.00 3.41
2705 3035 9.926751 CATTTCAAATGACTATCACATGTAGAC 57.073 33.333 3.82 0.00 0.00 2.59
2706 3036 8.615211 GCATTTCAAATGACTATCACATGTAGA 58.385 33.333 14.65 0.00 0.00 2.59
2707 3037 7.859377 GGCATTTCAAATGACTATCACATGTAG 59.141 37.037 14.65 0.00 0.00 2.74
2708 3038 7.557358 AGGCATTTCAAATGACTATCACATGTA 59.443 33.333 17.52 0.00 35.20 2.29
2709 3039 6.379133 AGGCATTTCAAATGACTATCACATGT 59.621 34.615 17.52 0.00 35.20 3.21
2710 3040 6.802608 AGGCATTTCAAATGACTATCACATG 58.197 36.000 17.52 0.00 35.20 3.21
2711 3041 7.994911 TCTAGGCATTTCAAATGACTATCACAT 59.005 33.333 23.50 1.77 38.80 3.21
2712 3042 7.337938 TCTAGGCATTTCAAATGACTATCACA 58.662 34.615 23.50 5.75 38.80 3.58
2713 3043 7.792374 TCTAGGCATTTCAAATGACTATCAC 57.208 36.000 23.50 0.15 38.80 3.06
2714 3044 8.806429 TTTCTAGGCATTTCAAATGACTATCA 57.194 30.769 23.50 12.23 38.80 2.15
2715 3045 9.113838 TCTTTCTAGGCATTTCAAATGACTATC 57.886 33.333 23.50 1.52 38.80 2.08
2716 3046 8.897752 GTCTTTCTAGGCATTTCAAATGACTAT 58.102 33.333 23.50 4.64 38.80 2.12
2717 3047 7.882791 TGTCTTTCTAGGCATTTCAAATGACTA 59.117 33.333 22.19 22.19 38.54 2.59
2718 3048 6.716628 TGTCTTTCTAGGCATTTCAAATGACT 59.283 34.615 22.35 22.35 41.04 3.41
2719 3049 6.913170 TGTCTTTCTAGGCATTTCAAATGAC 58.087 36.000 14.65 11.48 29.10 3.06
2720 3050 7.523293 TTGTCTTTCTAGGCATTTCAAATGA 57.477 32.000 14.65 0.00 35.56 2.57
2721 3051 8.767478 ATTTGTCTTTCTAGGCATTTCAAATG 57.233 30.769 5.68 5.68 35.56 2.32
2722 3052 9.860898 GTATTTGTCTTTCTAGGCATTTCAAAT 57.139 29.630 0.00 0.00 35.56 2.32
2723 3053 9.077885 AGTATTTGTCTTTCTAGGCATTTCAAA 57.922 29.630 0.00 0.00 35.56 2.69
2724 3054 8.635765 AGTATTTGTCTTTCTAGGCATTTCAA 57.364 30.769 0.00 0.00 35.56 2.69
2725 3055 7.336931 GGAGTATTTGTCTTTCTAGGCATTTCA 59.663 37.037 0.00 0.00 35.56 2.69
2726 3056 7.201741 GGGAGTATTTGTCTTTCTAGGCATTTC 60.202 40.741 0.00 0.00 35.56 2.17
2727 3057 6.603599 GGGAGTATTTGTCTTTCTAGGCATTT 59.396 38.462 0.00 0.00 35.56 2.32
2728 3058 6.069381 AGGGAGTATTTGTCTTTCTAGGCATT 60.069 38.462 0.00 0.00 35.56 3.56
2729 3059 5.430089 AGGGAGTATTTGTCTTTCTAGGCAT 59.570 40.000 0.00 0.00 35.56 4.40
2730 3060 4.783227 AGGGAGTATTTGTCTTTCTAGGCA 59.217 41.667 0.00 0.00 33.22 4.75
2731 3061 5.129650 AGAGGGAGTATTTGTCTTTCTAGGC 59.870 44.000 0.00 0.00 0.00 3.93
2732 3062 6.155393 ACAGAGGGAGTATTTGTCTTTCTAGG 59.845 42.308 0.00 0.00 0.00 3.02
2733 3063 7.176589 ACAGAGGGAGTATTTGTCTTTCTAG 57.823 40.000 0.00 0.00 0.00 2.43
2734 3064 8.660295 TTACAGAGGGAGTATTTGTCTTTCTA 57.340 34.615 0.00 0.00 0.00 2.10
2735 3065 7.554959 TTACAGAGGGAGTATTTGTCTTTCT 57.445 36.000 0.00 0.00 0.00 2.52
2736 3066 7.878644 AGTTTACAGAGGGAGTATTTGTCTTTC 59.121 37.037 0.00 0.00 0.00 2.62
2737 3067 7.746703 AGTTTACAGAGGGAGTATTTGTCTTT 58.253 34.615 0.00 0.00 0.00 2.52
2738 3068 7.317722 AGTTTACAGAGGGAGTATTTGTCTT 57.682 36.000 0.00 0.00 0.00 3.01
2739 3069 6.936968 AGTTTACAGAGGGAGTATTTGTCT 57.063 37.500 0.00 0.00 0.00 3.41
2747 3077 9.939424 ACTCTTATATTAGTTTACAGAGGGAGT 57.061 33.333 0.00 0.00 32.21 3.85
2763 3093 9.418839 AGTCCTCCGTAAACTAACTCTTATATT 57.581 33.333 0.00 0.00 0.00 1.28
2764 3094 8.993404 AGTCCTCCGTAAACTAACTCTTATAT 57.007 34.615 0.00 0.00 0.00 0.86
2766 3096 8.993404 ATAGTCCTCCGTAAACTAACTCTTAT 57.007 34.615 0.00 0.00 0.00 1.73
2767 3097 8.814038 AATAGTCCTCCGTAAACTAACTCTTA 57.186 34.615 0.00 0.00 0.00 2.10
2768 3098 7.715266 AATAGTCCTCCGTAAACTAACTCTT 57.285 36.000 0.00 0.00 0.00 2.85
2769 3099 7.715266 AAATAGTCCTCCGTAAACTAACTCT 57.285 36.000 0.00 0.00 0.00 3.24
2770 3100 8.134261 CCTAAATAGTCCTCCGTAAACTAACTC 58.866 40.741 0.00 0.00 0.00 3.01
2771 3101 7.836183 TCCTAAATAGTCCTCCGTAAACTAACT 59.164 37.037 0.00 0.00 0.00 2.24
2772 3102 8.000780 TCCTAAATAGTCCTCCGTAAACTAAC 57.999 38.462 0.00 0.00 0.00 2.34
2773 3103 8.470002 GTTCCTAAATAGTCCTCCGTAAACTAA 58.530 37.037 0.00 0.00 0.00 2.24
2774 3104 7.201732 CGTTCCTAAATAGTCCTCCGTAAACTA 60.202 40.741 0.00 0.00 0.00 2.24
2775 3105 6.405176 CGTTCCTAAATAGTCCTCCGTAAACT 60.405 42.308 0.00 0.00 0.00 2.66
2776 3106 5.745769 CGTTCCTAAATAGTCCTCCGTAAAC 59.254 44.000 0.00 0.00 0.00 2.01
2777 3107 5.163519 CCGTTCCTAAATAGTCCTCCGTAAA 60.164 44.000 0.00 0.00 0.00 2.01
2778 3108 4.339247 CCGTTCCTAAATAGTCCTCCGTAA 59.661 45.833 0.00 0.00 0.00 3.18
2779 3109 3.885297 CCGTTCCTAAATAGTCCTCCGTA 59.115 47.826 0.00 0.00 0.00 4.02
2780 3110 2.692041 CCGTTCCTAAATAGTCCTCCGT 59.308 50.000 0.00 0.00 0.00 4.69
2781 3111 2.954318 TCCGTTCCTAAATAGTCCTCCG 59.046 50.000 0.00 0.00 0.00 4.63
2782 3112 3.321396 CCTCCGTTCCTAAATAGTCCTCC 59.679 52.174 0.00 0.00 0.00 4.30
2783 3113 3.321396 CCCTCCGTTCCTAAATAGTCCTC 59.679 52.174 0.00 0.00 0.00 3.71
2784 3114 3.052338 TCCCTCCGTTCCTAAATAGTCCT 60.052 47.826 0.00 0.00 0.00 3.85
2785 3115 3.303049 TCCCTCCGTTCCTAAATAGTCC 58.697 50.000 0.00 0.00 0.00 3.85
2786 3116 3.959449 ACTCCCTCCGTTCCTAAATAGTC 59.041 47.826 0.00 0.00 0.00 2.59
2787 3117 3.991683 ACTCCCTCCGTTCCTAAATAGT 58.008 45.455 0.00 0.00 0.00 2.12
2788 3118 5.139001 ACTACTCCCTCCGTTCCTAAATAG 58.861 45.833 0.00 0.00 0.00 1.73
2789 3119 5.134725 ACTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
2790 3120 3.991683 ACTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
2791 3121 3.463048 ACTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
2792 3122 3.266772 TGTACTACTCCCTCCGTTCCTAA 59.733 47.826 0.00 0.00 0.00 2.69
2793 3123 2.846206 TGTACTACTCCCTCCGTTCCTA 59.154 50.000 0.00 0.00 0.00 2.94
2794 3124 1.637553 TGTACTACTCCCTCCGTTCCT 59.362 52.381 0.00 0.00 0.00 3.36
2795 3125 2.134789 TGTACTACTCCCTCCGTTCC 57.865 55.000 0.00 0.00 0.00 3.62
2796 3126 5.301298 ACAATATGTACTACTCCCTCCGTTC 59.699 44.000 0.00 0.00 0.00 3.95
2797 3127 5.068723 CACAATATGTACTACTCCCTCCGTT 59.931 44.000 0.00 0.00 0.00 4.44
2798 3128 4.583489 CACAATATGTACTACTCCCTCCGT 59.417 45.833 0.00 0.00 0.00 4.69
2799 3129 4.583489 ACACAATATGTACTACTCCCTCCG 59.417 45.833 0.00 0.00 40.88 4.63
2800 3130 6.127140 ACAACACAATATGTACTACTCCCTCC 60.127 42.308 0.00 0.00 42.31 4.30
2801 3131 6.757010 CACAACACAATATGTACTACTCCCTC 59.243 42.308 0.00 0.00 42.31 4.30
2802 3132 6.212791 ACACAACACAATATGTACTACTCCCT 59.787 38.462 0.00 0.00 42.31 4.20
2803 3133 6.312918 CACACAACACAATATGTACTACTCCC 59.687 42.308 0.00 0.00 42.31 4.30
2804 3134 6.312918 CCACACAACACAATATGTACTACTCC 59.687 42.308 0.00 0.00 42.31 3.85
2805 3135 7.063074 GTCCACACAACACAATATGTACTACTC 59.937 40.741 0.00 0.00 42.31 2.59
2806 3136 6.872020 GTCCACACAACACAATATGTACTACT 59.128 38.462 0.00 0.00 42.31 2.57
2807 3137 6.183360 CGTCCACACAACACAATATGTACTAC 60.183 42.308 0.00 0.00 42.31 2.73
2816 3146 2.552315 GGATTCGTCCACACAACACAAT 59.448 45.455 0.00 0.00 0.00 2.71
2823 3153 3.893324 TGGGGATTCGTCCACACA 58.107 55.556 0.00 0.00 38.46 3.72
2863 3211 2.048222 CACGCGCAGAGGAAGGAA 60.048 61.111 5.73 0.00 0.00 3.36
2886 3234 2.036006 GCGGCCCAACATAACACGA 61.036 57.895 0.00 0.00 0.00 4.35
2892 3240 0.963355 GAAACAGGCGGCCCAACATA 60.963 55.000 17.02 0.00 0.00 2.29
2895 3243 3.680786 GGAAACAGGCGGCCCAAC 61.681 66.667 17.02 3.12 0.00 3.77
3106 3594 6.096695 GCCTGAATTTAGCAAAATAAACGGA 58.903 36.000 0.00 0.00 34.12 4.69
3135 3623 2.479560 GGTTATTTCTGTTGGCCGCATC 60.480 50.000 0.00 0.00 0.00 3.91
3144 3632 5.718607 ACTAGTACCCTCGGTTATTTCTGTT 59.281 40.000 0.00 0.00 37.09 3.16
3158 3646 6.088541 TCCACTGAAGATTACTAGTACCCT 57.911 41.667 0.91 0.00 0.00 4.34
3159 3647 6.786967 TTCCACTGAAGATTACTAGTACCC 57.213 41.667 0.91 0.00 0.00 3.69
3163 3651 9.367444 CGTTAATTTCCACTGAAGATTACTAGT 57.633 33.333 0.00 0.00 0.00 2.57
3164 3652 8.328864 GCGTTAATTTCCACTGAAGATTACTAG 58.671 37.037 0.00 0.00 0.00 2.57
3165 3653 7.009815 CGCGTTAATTTCCACTGAAGATTACTA 59.990 37.037 0.00 0.00 0.00 1.82
3166 3654 6.183360 CGCGTTAATTTCCACTGAAGATTACT 60.183 38.462 0.00 0.00 0.00 2.24
3167 3655 5.957796 CGCGTTAATTTCCACTGAAGATTAC 59.042 40.000 0.00 0.00 0.00 1.89
3168 3656 5.870433 TCGCGTTAATTTCCACTGAAGATTA 59.130 36.000 5.77 0.00 0.00 1.75
3169 3657 4.693566 TCGCGTTAATTTCCACTGAAGATT 59.306 37.500 5.77 0.00 0.00 2.40
3292 3780 0.387929 ACATCACGGACTGACACGTT 59.612 50.000 0.00 0.00 42.04 3.99
3306 3794 1.076549 GCCAAAGGGACCCACATCA 59.923 57.895 14.60 0.00 35.59 3.07
3406 3899 2.512515 GACTCACGAGCCCATGCC 60.513 66.667 0.00 0.00 38.69 4.40
3483 3976 6.787085 AGAGTAGAGTTGGATTTCGTTTTG 57.213 37.500 0.00 0.00 0.00 2.44
3505 4000 6.313411 CCGATCGGAAGGAGTAGTTATACTAG 59.687 46.154 30.62 0.00 38.87 2.57
3506 4001 6.014242 TCCGATCGGAAGGAGTAGTTATACTA 60.014 42.308 33.96 4.81 40.85 1.82
3511 4006 3.565764 TCCGATCGGAAGGAGTAGTTA 57.434 47.619 33.96 7.04 42.05 2.24
3512 4007 2.431954 TCCGATCGGAAGGAGTAGTT 57.568 50.000 33.96 0.00 42.05 2.24
3522 4017 8.896320 TTTTGAGATAAATAATTCCGATCGGA 57.104 30.769 32.59 32.59 43.52 4.55
3570 4065 9.408648 TCGCAGAAATGGATATATCTAGATGTA 57.591 33.333 15.79 13.32 0.00 2.29
3571 4066 8.194104 GTCGCAGAAATGGATATATCTAGATGT 58.806 37.037 15.79 11.37 39.69 3.06
3572 4067 7.378194 CGTCGCAGAAATGGATATATCTAGATG 59.622 40.741 15.79 5.70 39.69 2.90
3573 4068 7.283354 TCGTCGCAGAAATGGATATATCTAGAT 59.717 37.037 10.73 10.73 39.69 1.98
3574 4069 6.598064 TCGTCGCAGAAATGGATATATCTAGA 59.402 38.462 12.42 0.00 39.69 2.43
3575 4070 6.786207 TCGTCGCAGAAATGGATATATCTAG 58.214 40.000 12.42 0.00 39.69 2.43
3576 4071 6.374613 ACTCGTCGCAGAAATGGATATATCTA 59.625 38.462 12.42 6.97 39.69 1.98
3577 4072 5.184096 ACTCGTCGCAGAAATGGATATATCT 59.816 40.000 12.42 0.00 39.69 1.98
3578 4073 5.403246 ACTCGTCGCAGAAATGGATATATC 58.597 41.667 3.96 3.96 39.69 1.63
3579 4074 5.392767 ACTCGTCGCAGAAATGGATATAT 57.607 39.130 0.00 0.00 39.69 0.86
3580 4075 4.848562 ACTCGTCGCAGAAATGGATATA 57.151 40.909 0.00 0.00 39.69 0.86
3581 4076 3.735237 ACTCGTCGCAGAAATGGATAT 57.265 42.857 0.00 0.00 39.69 1.63
3582 4077 4.642445 TTACTCGTCGCAGAAATGGATA 57.358 40.909 0.00 0.00 39.69 2.59
3583 4078 3.520290 TTACTCGTCGCAGAAATGGAT 57.480 42.857 0.00 0.00 39.69 3.41
3584 4079 3.520290 ATTACTCGTCGCAGAAATGGA 57.480 42.857 0.00 0.00 39.69 3.41
3585 4080 3.001330 GGAATTACTCGTCGCAGAAATGG 59.999 47.826 0.00 0.00 39.69 3.16
3586 4081 3.301835 CGGAATTACTCGTCGCAGAAATG 60.302 47.826 0.00 0.00 39.69 2.32
3587 4082 2.858344 CGGAATTACTCGTCGCAGAAAT 59.142 45.455 0.00 0.00 39.69 2.17
3588 4083 2.095110 TCGGAATTACTCGTCGCAGAAA 60.095 45.455 0.00 0.00 39.69 2.52
3589 4084 1.469703 TCGGAATTACTCGTCGCAGAA 59.530 47.619 0.00 0.00 39.69 3.02
3590 4085 1.063616 CTCGGAATTACTCGTCGCAGA 59.936 52.381 0.00 0.00 0.00 4.26
3591 4086 1.467875 CTCGGAATTACTCGTCGCAG 58.532 55.000 0.00 0.00 0.00 5.18
3592 4087 0.524816 GCTCGGAATTACTCGTCGCA 60.525 55.000 0.00 0.00 0.00 5.10
3593 4088 0.248539 AGCTCGGAATTACTCGTCGC 60.249 55.000 0.00 0.00 0.00 5.19
3594 4089 2.110226 GAAGCTCGGAATTACTCGTCG 58.890 52.381 0.00 0.00 0.00 5.12
3595 4090 3.423996 AGAAGCTCGGAATTACTCGTC 57.576 47.619 0.00 0.00 0.00 4.20
3596 4091 4.978083 TTAGAAGCTCGGAATTACTCGT 57.022 40.909 0.00 0.00 0.00 4.18
3597 4092 6.642683 TTTTTAGAAGCTCGGAATTACTCG 57.357 37.500 0.00 0.00 0.00 4.18
3622 4117 7.951806 TCTTATATTATGGGACGAAGGGAGTAA 59.048 37.037 0.00 0.00 0.00 2.24
3623 4118 7.472741 TCTTATATTATGGGACGAAGGGAGTA 58.527 38.462 0.00 0.00 0.00 2.59
3625 4120 6.852420 TCTTATATTATGGGACGAAGGGAG 57.148 41.667 0.00 0.00 0.00 4.30
3626 4121 6.013984 GGTTCTTATATTATGGGACGAAGGGA 60.014 42.308 0.00 0.00 0.00 4.20
3627 4122 6.013639 AGGTTCTTATATTATGGGACGAAGGG 60.014 42.308 0.00 0.00 0.00 3.95
3628 4123 7.005709 AGGTTCTTATATTATGGGACGAAGG 57.994 40.000 0.00 0.00 0.00 3.46
3629 4124 8.904099 AAAGGTTCTTATATTATGGGACGAAG 57.096 34.615 0.00 0.00 0.00 3.79
3630 4125 9.689501 AAAAAGGTTCTTATATTATGGGACGAA 57.310 29.630 0.00 0.00 0.00 3.85
3674 4169 5.185056 CCTCCGTCCCAATAAGATTGTTTTT 59.815 40.000 0.00 0.00 0.00 1.94
3675 4170 4.705023 CCTCCGTCCCAATAAGATTGTTTT 59.295 41.667 0.00 0.00 0.00 2.43
3676 4171 4.270008 CCTCCGTCCCAATAAGATTGTTT 58.730 43.478 0.00 0.00 0.00 2.83
3677 4172 3.371595 CCCTCCGTCCCAATAAGATTGTT 60.372 47.826 0.00 0.00 0.00 2.83
3678 4173 2.172717 CCCTCCGTCCCAATAAGATTGT 59.827 50.000 0.00 0.00 0.00 2.71
3679 4174 2.438021 TCCCTCCGTCCCAATAAGATTG 59.562 50.000 0.00 0.00 0.00 2.67
3680 4175 2.706190 CTCCCTCCGTCCCAATAAGATT 59.294 50.000 0.00 0.00 0.00 2.40
3681 4176 2.330216 CTCCCTCCGTCCCAATAAGAT 58.670 52.381 0.00 0.00 0.00 2.40
3682 4177 1.007963 ACTCCCTCCGTCCCAATAAGA 59.992 52.381 0.00 0.00 0.00 2.10
3683 4178 1.497161 ACTCCCTCCGTCCCAATAAG 58.503 55.000 0.00 0.00 0.00 1.73
3684 4179 2.852714 TACTCCCTCCGTCCCAATAA 57.147 50.000 0.00 0.00 0.00 1.40
3685 4180 3.339713 AATACTCCCTCCGTCCCAATA 57.660 47.619 0.00 0.00 0.00 1.90
3686 4181 2.191981 AATACTCCCTCCGTCCCAAT 57.808 50.000 0.00 0.00 0.00 3.16
3687 4182 2.023695 AGTAATACTCCCTCCGTCCCAA 60.024 50.000 0.00 0.00 0.00 4.12
3688 4183 1.572415 AGTAATACTCCCTCCGTCCCA 59.428 52.381 0.00 0.00 0.00 4.37
3689 4184 2.237643 GAGTAATACTCCCTCCGTCCC 58.762 57.143 9.19 0.00 39.28 4.46
3690 4185 1.878734 CGAGTAATACTCCCTCCGTCC 59.121 57.143 14.17 0.00 42.12 4.79
3691 4186 2.570135 ACGAGTAATACTCCCTCCGTC 58.430 52.381 14.17 0.00 42.12 4.79
3692 4187 2.725221 ACGAGTAATACTCCCTCCGT 57.275 50.000 14.17 6.57 42.12 4.69
3693 4188 4.321718 TCATACGAGTAATACTCCCTCCG 58.678 47.826 14.17 5.95 42.12 4.63
3694 4189 5.883503 CTCATACGAGTAATACTCCCTCC 57.116 47.826 14.17 0.00 42.12 4.30
3714 4209 1.815003 AGCAAATAAGCCAGCACACTC 59.185 47.619 0.00 0.00 34.23 3.51
3754 4258 3.900971 TCCCATAGATGCAATGCAAAGA 58.099 40.909 13.45 0.00 43.62 2.52
3776 4280 7.222611 GCGGAATAAAATAGTTGTACTCCGTAA 59.777 37.037 10.37 0.00 43.95 3.18
3852 4361 5.104941 TGACAACAAATAGATGGATCTCGGT 60.105 40.000 0.00 0.00 38.32 4.69
3862 4371 9.685276 TCAAATACAGGATGACAACAAATAGAT 57.315 29.630 0.00 0.00 39.69 1.98
3912 4421 2.096657 GCTCCAGGAAAATCGAGAAAGC 59.903 50.000 0.00 0.00 0.00 3.51
3935 4444 6.204495 CACCAACCAAAATGATTTTAGTTGGG 59.796 38.462 38.61 30.01 28.57 4.12
3958 4467 3.550842 GGTCTTTTGATCCTGCACAACAC 60.551 47.826 0.00 0.00 0.00 3.32
4028 4537 0.178767 CCGCCATGTCTGGATCTTCA 59.821 55.000 0.00 0.00 46.37 3.02
4048 4557 1.433879 CTCGCCTCTTACCACTCCG 59.566 63.158 0.00 0.00 0.00 4.63
4057 4566 2.038007 TGCTCCTCCTCGCCTCTT 59.962 61.111 0.00 0.00 0.00 2.85
4072 4588 3.615155 AGTTAGCAAAATCCTCTCCTGC 58.385 45.455 0.00 0.00 0.00 4.85
4110 4628 0.529378 GAGCAGCTGGGTTGATTTGG 59.471 55.000 17.12 0.00 0.00 3.28
4134 4652 2.576191 TCTACTGGCTTGCCCTTTATGT 59.424 45.455 9.35 1.88 0.00 2.29
4135 4653 3.281727 TCTACTGGCTTGCCCTTTATG 57.718 47.619 9.35 0.00 0.00 1.90
4137 4655 2.910319 TCTTCTACTGGCTTGCCCTTTA 59.090 45.455 9.35 0.00 0.00 1.85
4143 4664 2.626840 CCTCTTCTTCTACTGGCTTGC 58.373 52.381 0.00 0.00 0.00 4.01
4144 4665 2.569404 ACCCTCTTCTTCTACTGGCTTG 59.431 50.000 0.00 0.00 0.00 4.01
4163 4684 5.099042 TCTCAGCTTAACCTTAATCCACC 57.901 43.478 0.00 0.00 0.00 4.61
4164 4685 5.463724 CGATCTCAGCTTAACCTTAATCCAC 59.536 44.000 0.00 0.00 0.00 4.02
4165 4686 5.453339 CCGATCTCAGCTTAACCTTAATCCA 60.453 44.000 0.00 0.00 0.00 3.41
4167 4688 5.844004 TCCGATCTCAGCTTAACCTTAATC 58.156 41.667 0.00 0.00 0.00 1.75
4168 4689 5.221541 CCTCCGATCTCAGCTTAACCTTAAT 60.222 44.000 0.00 0.00 0.00 1.40
4169 4690 4.099573 CCTCCGATCTCAGCTTAACCTTAA 59.900 45.833 0.00 0.00 0.00 1.85
4170 4691 3.637229 CCTCCGATCTCAGCTTAACCTTA 59.363 47.826 0.00 0.00 0.00 2.69
4171 4692 2.432510 CCTCCGATCTCAGCTTAACCTT 59.567 50.000 0.00 0.00 0.00 3.50
4172 4693 2.035632 CCTCCGATCTCAGCTTAACCT 58.964 52.381 0.00 0.00 0.00 3.50
4357 4881 1.552792 TGCACCGTATCAGTTGATCCA 59.447 47.619 0.00 0.00 36.05 3.41
4359 4883 3.457234 TCATGCACCGTATCAGTTGATC 58.543 45.455 0.00 0.00 36.05 2.92
4486 5214 6.591935 TGCCGGTCTCTAAATCAATAATTCT 58.408 36.000 1.90 0.00 0.00 2.40
4492 5220 5.930135 ACTAATGCCGGTCTCTAAATCAAT 58.070 37.500 1.90 0.00 0.00 2.57
4493 5221 5.353394 ACTAATGCCGGTCTCTAAATCAA 57.647 39.130 1.90 0.00 0.00 2.57
4501 5229 3.538634 AAAGGTACTAATGCCGGTCTC 57.461 47.619 1.90 0.00 38.49 3.36
4502 5230 3.994931 AAAAGGTACTAATGCCGGTCT 57.005 42.857 1.90 0.00 38.49 3.85
4503 5231 4.763073 ACTAAAAGGTACTAATGCCGGTC 58.237 43.478 1.90 0.00 38.49 4.79
4506 5234 9.333497 GTTTTAAACTAAAAGGTACTAATGCCG 57.667 33.333 0.00 0.00 38.49 5.69
4528 5256 5.796424 ACCATTGCTCATGAAAGAGTTTT 57.204 34.783 0.00 0.00 37.94 2.43
4537 5265 2.710377 GGTGTGTACCATTGCTCATGA 58.290 47.619 0.00 0.00 46.71 3.07
4631 5362 5.415701 ACCACAGTGCTAAACCATTTCATAG 59.584 40.000 0.00 0.00 0.00 2.23
4654 5700 1.531602 AAGCCCCAGCCAAGTCAAC 60.532 57.895 0.00 0.00 41.25 3.18
4669 5715 1.268743 GGCTCACAAGTCACAACAAGC 60.269 52.381 0.00 0.00 0.00 4.01
4673 5719 1.014352 AACGGCTCACAAGTCACAAC 58.986 50.000 0.00 0.00 0.00 3.32
4792 5838 6.799926 TCGGTTTATTTTACTAAACGCCTT 57.200 33.333 0.00 0.00 40.78 4.35
4830 9819 5.153950 CCTTCTATACAGGGATAAGCACC 57.846 47.826 0.00 0.00 0.00 5.01
4873 9888 4.689071 CACTGGTGCCTATTTGTATACGA 58.311 43.478 0.00 0.00 0.00 3.43
4890 9905 6.506500 AATCAGTCTTTTCATAAGCACTGG 57.493 37.500 0.00 0.00 33.50 4.00
4911 9926 6.582929 AGGGAGGTGCTTAGAGAAATAAAT 57.417 37.500 0.00 0.00 0.00 1.40
4952 9969 8.758715 CGTTTTTATATTAGTTTACGGAGGGAG 58.241 37.037 0.00 0.00 0.00 4.30
4953 9970 8.257306 ACGTTTTTATATTAGTTTACGGAGGGA 58.743 33.333 0.00 0.00 32.54 4.20
4954 9971 8.424274 ACGTTTTTATATTAGTTTACGGAGGG 57.576 34.615 0.00 0.00 32.54 4.30
4988 10005 9.733556 TGCCAAATTCTATCTTCACTAAAGTAA 57.266 29.630 0.00 0.00 36.31 2.24
4989 10006 9.383519 CTGCCAAATTCTATCTTCACTAAAGTA 57.616 33.333 0.00 0.00 36.31 2.24
4990 10007 7.885399 ACTGCCAAATTCTATCTTCACTAAAGT 59.115 33.333 0.00 0.00 36.31 2.66
4991 10008 8.273780 ACTGCCAAATTCTATCTTCACTAAAG 57.726 34.615 0.00 0.00 36.22 1.85
4992 10009 9.905713 ATACTGCCAAATTCTATCTTCACTAAA 57.094 29.630 0.00 0.00 0.00 1.85
4994 10011 9.982651 GTATACTGCCAAATTCTATCTTCACTA 57.017 33.333 0.00 0.00 0.00 2.74
4995 10012 8.486210 TGTATACTGCCAAATTCTATCTTCACT 58.514 33.333 4.17 0.00 0.00 3.41
4996 10013 8.662781 TGTATACTGCCAAATTCTATCTTCAC 57.337 34.615 4.17 0.00 0.00 3.18
4997 10014 8.704668 TCTGTATACTGCCAAATTCTATCTTCA 58.295 33.333 4.17 0.00 0.00 3.02
4998 10015 9.202273 CTCTGTATACTGCCAAATTCTATCTTC 57.798 37.037 4.17 0.00 0.00 2.87
4999 10016 8.153550 CCTCTGTATACTGCCAAATTCTATCTT 58.846 37.037 4.17 0.00 0.00 2.40
5000 10017 7.256475 CCCTCTGTATACTGCCAAATTCTATCT 60.256 40.741 4.17 0.00 0.00 1.98
5001 10018 6.876257 CCCTCTGTATACTGCCAAATTCTATC 59.124 42.308 4.17 0.00 0.00 2.08
5002 10019 6.558775 TCCCTCTGTATACTGCCAAATTCTAT 59.441 38.462 4.17 0.00 0.00 1.98
5003 10020 5.903010 TCCCTCTGTATACTGCCAAATTCTA 59.097 40.000 4.17 0.00 0.00 2.10
5004 10021 4.721776 TCCCTCTGTATACTGCCAAATTCT 59.278 41.667 4.17 0.00 0.00 2.40
5005 10022 5.036117 TCCCTCTGTATACTGCCAAATTC 57.964 43.478 4.17 0.00 0.00 2.17
5006 10023 4.475016 ACTCCCTCTGTATACTGCCAAATT 59.525 41.667 4.17 0.00 0.00 1.82
5007 10024 4.040755 ACTCCCTCTGTATACTGCCAAAT 58.959 43.478 4.17 0.00 0.00 2.32
5008 10025 3.450904 ACTCCCTCTGTATACTGCCAAA 58.549 45.455 4.17 0.00 0.00 3.28
5009 10026 3.116096 ACTCCCTCTGTATACTGCCAA 57.884 47.619 4.17 0.00 0.00 4.52
5010 10027 2.848678 ACTCCCTCTGTATACTGCCA 57.151 50.000 4.17 0.00 0.00 4.92
5011 10028 6.151480 GTCTTATACTCCCTCTGTATACTGCC 59.849 46.154 4.17 0.00 33.99 4.85
5012 10029 6.943718 AGTCTTATACTCCCTCTGTATACTGC 59.056 42.308 4.17 0.00 33.99 4.40
5013 10030 8.788806 CAAGTCTTATACTCCCTCTGTATACTG 58.211 40.741 4.17 3.79 37.50 2.74
5014 10031 8.725256 TCAAGTCTTATACTCCCTCTGTATACT 58.275 37.037 4.17 0.00 37.50 2.12
5015 10032 8.921353 TCAAGTCTTATACTCCCTCTGTATAC 57.079 38.462 0.00 0.00 37.50 1.47
5017 10034 8.865090 CATTCAAGTCTTATACTCCCTCTGTAT 58.135 37.037 0.00 0.00 37.50 2.29
5018 10035 7.287927 CCATTCAAGTCTTATACTCCCTCTGTA 59.712 40.741 0.00 0.00 37.50 2.74
5019 10036 6.098982 CCATTCAAGTCTTATACTCCCTCTGT 59.901 42.308 0.00 0.00 37.50 3.41
5020 10037 6.098982 ACCATTCAAGTCTTATACTCCCTCTG 59.901 42.308 0.00 0.00 37.50 3.35
5021 10038 6.206042 ACCATTCAAGTCTTATACTCCCTCT 58.794 40.000 0.00 0.00 37.50 3.69
5022 10039 6.487299 ACCATTCAAGTCTTATACTCCCTC 57.513 41.667 0.00 0.00 37.50 4.30
5023 10040 5.069251 CGACCATTCAAGTCTTATACTCCCT 59.931 44.000 0.00 0.00 37.50 4.20
5024 10041 5.068723 TCGACCATTCAAGTCTTATACTCCC 59.931 44.000 0.00 0.00 37.50 4.30
5025 10042 6.145338 TCGACCATTCAAGTCTTATACTCC 57.855 41.667 0.00 0.00 37.50 3.85
5026 10043 8.475331 TTTTCGACCATTCAAGTCTTATACTC 57.525 34.615 0.00 0.00 37.50 2.59
5027 10044 8.883731 CATTTTCGACCATTCAAGTCTTATACT 58.116 33.333 0.00 0.00 41.49 2.12
5028 10045 8.879759 TCATTTTCGACCATTCAAGTCTTATAC 58.120 33.333 0.00 0.00 31.83 1.47
5029 10046 9.443323 TTCATTTTCGACCATTCAAGTCTTATA 57.557 29.630 0.00 0.00 31.83 0.98
5030 10047 7.921786 TCATTTTCGACCATTCAAGTCTTAT 57.078 32.000 0.00 0.00 31.83 1.73
5039 10056 8.748380 AGAAATCTTTTCATTTTCGACCATTC 57.252 30.769 3.11 0.00 35.14 2.67
5125 10147 3.434940 AGTGGTATTCCTTTCGCCTTT 57.565 42.857 0.00 0.00 34.23 3.11
5175 10197 9.527157 TCAATGGTAAAATTCTATCTTCAACCA 57.473 29.630 0.00 0.00 38.72 3.67
5195 10217 7.800155 AACCCAAAGTTAAATGTTTCAATGG 57.200 32.000 0.00 0.00 36.74 3.16
5232 10255 7.646130 GGATGTCTCGTGAAACAAATAACAAAA 59.354 33.333 0.00 0.00 35.74 2.44
5246 10269 2.825532 TGAGATGTTGGATGTCTCGTGA 59.174 45.455 0.00 0.00 40.92 4.35
5278 10301 4.212847 GGAAAGGTAGACGGTGAGTTTTTC 59.787 45.833 0.00 0.00 0.00 2.29
5313 10336 4.375272 ACATTAGAGATCCACGATGCAAG 58.625 43.478 0.00 0.00 0.00 4.01
5436 10469 3.069158 ACCAGTATGTGTCCGGCTAATAC 59.931 47.826 0.00 2.44 0.00 1.89
5445 10478 3.009723 CACATGGAACCAGTATGTGTCC 58.990 50.000 14.30 0.00 44.00 4.02
5450 10483 3.281158 TCATGCACATGGAACCAGTATG 58.719 45.455 10.58 2.22 39.24 2.39



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.