Multiple sequence alignment - TraesCS7D01G251300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G251300 chr7D 100.000 8851 0 0 1 8851 224049623 224058473 0.000000e+00 16345.0
1 TraesCS7D01G251300 chr7B 95.645 5304 158 40 1480 6751 173860477 173865739 0.000000e+00 8447.0
2 TraesCS7D01G251300 chr7B 93.989 1780 76 9 7090 8851 173866100 173867866 0.000000e+00 2665.0
3 TraesCS7D01G251300 chr7B 88.808 1099 68 22 412 1478 173859337 173860412 0.000000e+00 1297.0
4 TraesCS7D01G251300 chr7B 86.154 195 20 6 1 190 173344497 173344689 4.190000e-48 204.0
5 TraesCS7D01G251300 chr7A 98.705 3784 45 3 2562 6343 237522729 237518948 0.000000e+00 6713.0
6 TraesCS7D01G251300 chr7A 96.096 2203 81 3 372 2574 237525112 237522915 0.000000e+00 3587.0
7 TraesCS7D01G251300 chr7A 93.980 1794 69 16 7090 8851 237518398 237516612 0.000000e+00 2678.0
8 TraesCS7D01G251300 chr7A 98.273 579 4 1 6352 6930 237518969 237518397 0.000000e+00 1009.0
9 TraesCS7D01G251300 chr7A 76.531 196 29 14 143 327 180160391 180160580 3.400000e-14 91.6
10 TraesCS7D01G251300 chr7A 86.111 72 4 5 260 327 729016902 729016971 1.230000e-08 73.1
11 TraesCS7D01G251300 chr2D 99.387 163 1 0 6929 7091 524567964 524568126 6.720000e-76 296.0
12 TraesCS7D01G251300 chr5D 96.491 171 6 0 6929 7099 498721907 498722077 5.230000e-72 283.0
13 TraesCS7D01G251300 chr5D 83.186 226 37 1 5773 5997 383776440 383776215 1.160000e-48 206.0
14 TraesCS7D01G251300 chr5D 73.563 435 90 20 1688 2114 383780720 383780303 9.260000e-30 143.0
15 TraesCS7D01G251300 chr6B 97.546 163 4 0 6929 7091 20777120 20776958 6.770000e-71 279.0
16 TraesCS7D01G251300 chr6B 77.397 146 29 4 5855 5998 702828229 702828372 5.690000e-12 84.2
17 TraesCS7D01G251300 chr3D 96.407 167 6 0 6928 7094 174415891 174415725 8.750000e-70 276.0
18 TraesCS7D01G251300 chr5B 95.858 169 7 0 6925 7093 701551645 701551813 3.150000e-69 274.0
19 TraesCS7D01G251300 chr5B 94.382 178 8 2 6929 7105 107733038 107733214 1.130000e-68 272.0
20 TraesCS7D01G251300 chr5B 83.186 226 37 1 5773 5997 460265959 460265734 1.160000e-48 206.0
21 TraesCS7D01G251300 chr5B 72.581 434 87 22 1688 2114 460270221 460269813 7.260000e-21 113.0
22 TraesCS7D01G251300 chr4D 96.386 166 6 0 6927 7092 279494056 279494221 3.150000e-69 274.0
23 TraesCS7D01G251300 chr4B 95.858 169 7 0 6925 7093 192259702 192259870 3.150000e-69 274.0
24 TraesCS7D01G251300 chr1B 94.828 174 9 0 6926 7099 370161650 370161823 1.130000e-68 272.0
25 TraesCS7D01G251300 chr1B 76.821 151 29 6 5851 5998 655100496 655100349 7.370000e-11 80.5
26 TraesCS7D01G251300 chr5A 83.186 226 37 1 5773 5997 484079423 484079198 1.160000e-48 206.0
27 TraesCS7D01G251300 chr5A 74.083 436 86 22 1688 2114 484083349 484082932 4.280000e-33 154.0
28 TraesCS7D01G251300 chr6D 79.032 186 26 12 148 327 276116914 276116736 2.020000e-21 115.0
29 TraesCS7D01G251300 chr6D 76.712 146 30 4 5855 5998 461357664 461357807 2.650000e-10 78.7
30 TraesCS7D01G251300 chr2B 78.173 197 27 11 141 329 661183381 661183569 2.610000e-20 111.0
31 TraesCS7D01G251300 chr6A 76.712 146 30 4 5855 5998 607954896 607955039 2.650000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G251300 chr7D 224049623 224058473 8850 False 16345.000000 16345 100.0000 1 8851 1 chr7D.!!$F1 8850
1 TraesCS7D01G251300 chr7B 173859337 173867866 8529 False 4136.333333 8447 92.8140 412 8851 3 chr7B.!!$F2 8439
2 TraesCS7D01G251300 chr7A 237516612 237525112 8500 True 3496.750000 6713 96.7635 372 8851 4 chr7A.!!$R1 8479

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
35 36 0.036164 CCGTCAACATCTTCCACCCA 59.964 55.000 0.00 0.00 0.00 4.51 F
119 120 0.110056 CGTGCACTTGTCATTCTGCC 60.110 55.000 16.19 0.00 0.00 4.85 F
152 153 0.162294 CCGAGCGACCGTGTTTTTAC 59.838 55.000 0.00 0.00 0.00 2.01 F
275 276 0.389757 GGTGCGTTTTTGGGCCTTAA 59.610 50.000 4.53 0.00 0.00 1.85 F
919 931 0.391966 GGCGTCAAGGTACCTATCCC 59.608 60.000 16.67 7.97 0.00 3.85 F
958 973 0.530650 CTCTCTCGCTCTCGCTCTCT 60.531 60.000 0.00 0.00 35.26 3.10 F
962 977 0.809636 CTCGCTCTCGCTCTCTCTCA 60.810 60.000 0.00 0.00 35.26 3.27 F
1182 1215 0.897863 TAGGTGCAAATTGGGCGCTT 60.898 50.000 7.64 9.82 41.36 4.68 F
1800 1907 1.594331 GTCAGCGGAGTGGAAACTTT 58.406 50.000 0.00 0.00 0.00 2.66 F
3503 3812 0.243907 GTTCTGCTGCGACACCTCTA 59.756 55.000 0.00 0.00 0.00 2.43 F
4010 4319 2.427453 TCAGTCCGCCTCAAGAAGTATC 59.573 50.000 0.00 0.00 0.00 2.24 F
5279 5595 3.748568 CAGAACTAGGGTTGAGAGTTTGC 59.251 47.826 0.00 0.00 35.58 3.68 F
5717 6033 1.021202 GCAACCAGCATACGCCATAA 58.979 50.000 0.00 0.00 44.79 1.90 F
6778 7293 0.539518 TAAGGCAGTAATGCTCCGCA 59.460 50.000 15.61 0.00 44.86 5.69 F
7403 7920 0.670162 GTGCTTTGCTTCAGCTCCAA 59.330 50.000 0.00 0.00 42.66 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1183 1216 0.314935 ACACAGCAATTCCAAAGCGG 59.685 50.000 0.00 0.0 0.00 5.52 R
1306 1350 1.206371 GCTAAAGGTACCAAGCCTCGA 59.794 52.381 15.94 0.0 34.81 4.04 R
1965 2072 4.219115 TCCATTCTTTAACCTTGCCAACA 58.781 39.130 0.00 0.0 0.00 3.33 R
2167 2274 1.632409 TGGAAAGCAGGCAAGAGAGAT 59.368 47.619 0.00 0.0 0.00 2.75 R
2334 2444 4.871513 TGATATAAGCACAAGGTAGCTCG 58.128 43.478 0.00 0.0 40.90 5.03 R
2395 2505 5.876357 ACCATTTCTAACAAAGGAGTGCTA 58.124 37.500 0.00 0.0 0.00 3.49 R
2574 2684 8.224169 CATCTATGCAAAAGAAAAACTCAGTG 57.776 34.615 6.25 0.0 0.00 3.66 R
3117 3426 1.135527 CGTAGTCGGGCTATCCAAACA 59.864 52.381 0.00 0.0 34.36 2.83 R
3707 4016 2.856231 ACCCCTTGGAGCCAATGTATTA 59.144 45.455 1.86 0.0 35.20 0.98 R
4994 5303 3.820467 TGCCAGACACAAAATCTAGGTTG 59.180 43.478 0.00 0.0 0.00 3.77 R
5496 5812 4.146245 ACCCATTTCTCCCAATTTCCTT 57.854 40.909 0.00 0.0 0.00 3.36 R
6357 6684 1.269517 GCGACAAATGAACCAAAGGCA 60.270 47.619 0.00 0.0 0.00 4.75 R
7372 7889 1.000171 GCAAAGCACAGGGAAGAAAGG 60.000 52.381 0.00 0.0 0.00 3.11 R
7686 8218 1.710013 CACACGGCTACCAACTAGTG 58.290 55.000 0.00 0.0 35.89 2.74 R
8742 9296 1.870901 CCGCTACGCCGTGAACTAC 60.871 63.158 0.00 0.0 0.00 2.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.806608 TGTTTGGACACTACTCCGTC 57.193 50.000 0.00 0.00 32.22 4.79
21 22 2.033372 TGTTTGGACACTACTCCGTCA 58.967 47.619 0.00 0.00 33.66 4.35
22 23 2.431419 TGTTTGGACACTACTCCGTCAA 59.569 45.455 0.00 0.00 33.66 3.18
23 24 2.798847 GTTTGGACACTACTCCGTCAAC 59.201 50.000 0.00 0.00 33.66 3.18
24 25 1.694844 TGGACACTACTCCGTCAACA 58.305 50.000 0.00 0.00 33.66 3.33
25 26 2.244695 TGGACACTACTCCGTCAACAT 58.755 47.619 0.00 0.00 33.66 2.71
26 27 2.230508 TGGACACTACTCCGTCAACATC 59.769 50.000 0.00 0.00 33.66 3.06
27 28 2.492484 GGACACTACTCCGTCAACATCT 59.508 50.000 0.00 0.00 33.66 2.90
28 29 3.056749 GGACACTACTCCGTCAACATCTT 60.057 47.826 0.00 0.00 33.66 2.40
29 30 4.167268 GACACTACTCCGTCAACATCTTC 58.833 47.826 0.00 0.00 32.24 2.87
30 31 3.056749 ACACTACTCCGTCAACATCTTCC 60.057 47.826 0.00 0.00 0.00 3.46
31 32 3.056821 CACTACTCCGTCAACATCTTCCA 60.057 47.826 0.00 0.00 0.00 3.53
32 33 2.457366 ACTCCGTCAACATCTTCCAC 57.543 50.000 0.00 0.00 0.00 4.02
33 34 1.002087 ACTCCGTCAACATCTTCCACC 59.998 52.381 0.00 0.00 0.00 4.61
34 35 0.323629 TCCGTCAACATCTTCCACCC 59.676 55.000 0.00 0.00 0.00 4.61
35 36 0.036164 CCGTCAACATCTTCCACCCA 59.964 55.000 0.00 0.00 0.00 4.51
36 37 1.340017 CCGTCAACATCTTCCACCCAT 60.340 52.381 0.00 0.00 0.00 4.00
37 38 2.009774 CGTCAACATCTTCCACCCATC 58.990 52.381 0.00 0.00 0.00 3.51
38 39 2.369394 GTCAACATCTTCCACCCATCC 58.631 52.381 0.00 0.00 0.00 3.51
39 40 2.025887 GTCAACATCTTCCACCCATCCT 60.026 50.000 0.00 0.00 0.00 3.24
40 41 2.649312 TCAACATCTTCCACCCATCCTT 59.351 45.455 0.00 0.00 0.00 3.36
41 42 3.019564 CAACATCTTCCACCCATCCTTC 58.980 50.000 0.00 0.00 0.00 3.46
42 43 1.566231 ACATCTTCCACCCATCCTTCC 59.434 52.381 0.00 0.00 0.00 3.46
43 44 1.849039 CATCTTCCACCCATCCTTCCT 59.151 52.381 0.00 0.00 0.00 3.36
44 45 1.289160 TCTTCCACCCATCCTTCCTG 58.711 55.000 0.00 0.00 0.00 3.86
45 46 0.995024 CTTCCACCCATCCTTCCTGT 59.005 55.000 0.00 0.00 0.00 4.00
46 47 2.196595 CTTCCACCCATCCTTCCTGTA 58.803 52.381 0.00 0.00 0.00 2.74
47 48 1.879575 TCCACCCATCCTTCCTGTAG 58.120 55.000 0.00 0.00 0.00 2.74
48 49 0.181350 CCACCCATCCTTCCTGTAGC 59.819 60.000 0.00 0.00 0.00 3.58
49 50 0.911769 CACCCATCCTTCCTGTAGCA 59.088 55.000 0.00 0.00 0.00 3.49
50 51 0.912486 ACCCATCCTTCCTGTAGCAC 59.088 55.000 0.00 0.00 0.00 4.40
51 52 0.179073 CCCATCCTTCCTGTAGCACG 60.179 60.000 0.00 0.00 0.00 5.34
52 53 0.179073 CCATCCTTCCTGTAGCACGG 60.179 60.000 0.00 0.00 0.00 4.94
53 54 0.537188 CATCCTTCCTGTAGCACGGT 59.463 55.000 0.00 0.00 0.00 4.83
54 55 1.066143 CATCCTTCCTGTAGCACGGTT 60.066 52.381 0.00 0.00 0.00 4.44
55 56 0.606604 TCCTTCCTGTAGCACGGTTC 59.393 55.000 0.00 0.00 0.00 3.62
56 57 0.320374 CCTTCCTGTAGCACGGTTCA 59.680 55.000 0.00 0.00 0.00 3.18
57 58 1.429463 CTTCCTGTAGCACGGTTCAC 58.571 55.000 0.00 0.00 0.00 3.18
58 59 1.000955 CTTCCTGTAGCACGGTTCACT 59.999 52.381 0.00 0.00 0.00 3.41
59 60 1.045407 TCCTGTAGCACGGTTCACTT 58.955 50.000 0.00 0.00 0.00 3.16
60 61 1.000506 TCCTGTAGCACGGTTCACTTC 59.999 52.381 0.00 0.00 0.00 3.01
61 62 1.429463 CTGTAGCACGGTTCACTTCC 58.571 55.000 0.00 0.00 0.00 3.46
67 68 3.725819 CGGTTCACTTCCGCAACA 58.274 55.556 0.00 0.00 41.48 3.33
68 69 1.278637 CGGTTCACTTCCGCAACAC 59.721 57.895 0.00 0.00 41.48 3.32
69 70 1.652563 GGTTCACTTCCGCAACACC 59.347 57.895 0.00 0.00 0.00 4.16
70 71 0.818040 GGTTCACTTCCGCAACACCT 60.818 55.000 0.00 0.00 0.00 4.00
71 72 1.021968 GTTCACTTCCGCAACACCTT 58.978 50.000 0.00 0.00 0.00 3.50
72 73 1.404035 GTTCACTTCCGCAACACCTTT 59.596 47.619 0.00 0.00 0.00 3.11
73 74 1.757682 TCACTTCCGCAACACCTTTT 58.242 45.000 0.00 0.00 0.00 2.27
74 75 1.673920 TCACTTCCGCAACACCTTTTC 59.326 47.619 0.00 0.00 0.00 2.29
75 76 1.676006 CACTTCCGCAACACCTTTTCT 59.324 47.619 0.00 0.00 0.00 2.52
76 77 2.099098 CACTTCCGCAACACCTTTTCTT 59.901 45.455 0.00 0.00 0.00 2.52
77 78 2.758423 ACTTCCGCAACACCTTTTCTTT 59.242 40.909 0.00 0.00 0.00 2.52
78 79 2.861462 TCCGCAACACCTTTTCTTTG 57.139 45.000 0.00 0.00 0.00 2.77
79 80 2.370349 TCCGCAACACCTTTTCTTTGA 58.630 42.857 0.00 0.00 0.00 2.69
80 81 2.098443 TCCGCAACACCTTTTCTTTGAC 59.902 45.455 0.00 0.00 0.00 3.18
81 82 2.159310 CCGCAACACCTTTTCTTTGACA 60.159 45.455 0.00 0.00 0.00 3.58
82 83 3.108144 CGCAACACCTTTTCTTTGACAG 58.892 45.455 0.00 0.00 0.00 3.51
83 84 2.860136 GCAACACCTTTTCTTTGACAGC 59.140 45.455 0.00 0.00 0.00 4.40
84 85 3.429410 GCAACACCTTTTCTTTGACAGCT 60.429 43.478 0.00 0.00 0.00 4.24
85 86 4.107622 CAACACCTTTTCTTTGACAGCTG 58.892 43.478 13.48 13.48 0.00 4.24
86 87 3.620488 ACACCTTTTCTTTGACAGCTGA 58.380 40.909 23.35 0.00 0.00 4.26
87 88 3.378427 ACACCTTTTCTTTGACAGCTGAC 59.622 43.478 23.35 15.92 0.00 3.51
88 89 3.378112 CACCTTTTCTTTGACAGCTGACA 59.622 43.478 23.35 18.86 0.00 3.58
89 90 3.378427 ACCTTTTCTTTGACAGCTGACAC 59.622 43.478 23.35 11.72 0.00 3.67
90 91 3.629398 CCTTTTCTTTGACAGCTGACACT 59.371 43.478 23.35 0.00 0.00 3.55
91 92 4.096984 CCTTTTCTTTGACAGCTGACACTT 59.903 41.667 23.35 0.00 0.00 3.16
92 93 5.393461 CCTTTTCTTTGACAGCTGACACTTT 60.393 40.000 23.35 0.00 0.00 2.66
93 94 5.643379 TTTCTTTGACAGCTGACACTTTT 57.357 34.783 23.35 0.00 0.00 2.27
94 95 5.643379 TTCTTTGACAGCTGACACTTTTT 57.357 34.783 23.35 0.00 0.00 1.94
95 96 5.235305 TCTTTGACAGCTGACACTTTTTC 57.765 39.130 23.35 5.14 0.00 2.29
96 97 4.943705 TCTTTGACAGCTGACACTTTTTCT 59.056 37.500 23.35 0.00 0.00 2.52
97 98 4.621068 TTGACAGCTGACACTTTTTCTG 57.379 40.909 23.35 0.00 0.00 3.02
98 99 3.609853 TGACAGCTGACACTTTTTCTGT 58.390 40.909 23.35 0.00 37.47 3.41
99 100 3.374988 TGACAGCTGACACTTTTTCTGTG 59.625 43.478 23.35 0.00 40.87 3.66
100 101 2.098117 ACAGCTGACACTTTTTCTGTGC 59.902 45.455 23.35 0.00 38.86 4.57
101 102 1.331756 AGCTGACACTTTTTCTGTGCG 59.668 47.619 0.00 0.00 38.86 5.34
102 103 1.064060 GCTGACACTTTTTCTGTGCGT 59.936 47.619 0.00 0.00 38.86 5.24
103 104 2.708514 CTGACACTTTTTCTGTGCGTG 58.291 47.619 0.00 0.00 38.86 5.34
104 105 1.202132 TGACACTTTTTCTGTGCGTGC 60.202 47.619 0.00 0.00 38.86 5.34
105 106 0.808125 ACACTTTTTCTGTGCGTGCA 59.192 45.000 0.00 0.00 38.86 4.57
106 107 1.191096 CACTTTTTCTGTGCGTGCAC 58.809 50.000 17.72 17.72 46.33 4.57
107 108 1.094785 ACTTTTTCTGTGCGTGCACT 58.905 45.000 23.86 0.11 46.30 4.40
108 109 1.472480 ACTTTTTCTGTGCGTGCACTT 59.528 42.857 23.86 0.00 46.30 3.16
109 110 1.847999 CTTTTTCTGTGCGTGCACTTG 59.152 47.619 23.86 16.64 46.30 3.16
110 111 0.808125 TTTTCTGTGCGTGCACTTGT 59.192 45.000 23.86 0.00 46.30 3.16
111 112 0.376852 TTTCTGTGCGTGCACTTGTC 59.623 50.000 23.86 3.43 46.30 3.18
112 113 0.742635 TTCTGTGCGTGCACTTGTCA 60.743 50.000 23.86 7.84 46.30 3.58
113 114 0.532640 TCTGTGCGTGCACTTGTCAT 60.533 50.000 23.86 0.00 46.30 3.06
114 115 0.308684 CTGTGCGTGCACTTGTCATT 59.691 50.000 23.86 0.00 46.30 2.57
115 116 0.307453 TGTGCGTGCACTTGTCATTC 59.693 50.000 23.86 0.00 46.30 2.67
116 117 0.588252 GTGCGTGCACTTGTCATTCT 59.412 50.000 17.32 0.00 43.12 2.40
117 118 0.587768 TGCGTGCACTTGTCATTCTG 59.412 50.000 16.19 0.00 0.00 3.02
118 119 0.727122 GCGTGCACTTGTCATTCTGC 60.727 55.000 16.19 2.61 0.00 4.26
119 120 0.110056 CGTGCACTTGTCATTCTGCC 60.110 55.000 16.19 0.00 0.00 4.85
120 121 0.953727 GTGCACTTGTCATTCTGCCA 59.046 50.000 10.32 0.00 0.00 4.92
121 122 1.542915 GTGCACTTGTCATTCTGCCAT 59.457 47.619 10.32 0.00 0.00 4.40
122 123 1.542472 TGCACTTGTCATTCTGCCATG 59.458 47.619 0.00 0.00 0.00 3.66
123 124 1.542915 GCACTTGTCATTCTGCCATGT 59.457 47.619 0.00 0.00 0.00 3.21
124 125 2.749076 GCACTTGTCATTCTGCCATGTA 59.251 45.455 0.00 0.00 0.00 2.29
125 126 3.426695 GCACTTGTCATTCTGCCATGTAC 60.427 47.826 0.00 0.00 0.00 2.90
126 127 3.002791 ACTTGTCATTCTGCCATGTACG 58.997 45.455 0.00 0.00 0.00 3.67
127 128 1.368641 TGTCATTCTGCCATGTACGC 58.631 50.000 0.00 0.00 0.00 4.42
128 129 1.338579 TGTCATTCTGCCATGTACGCA 60.339 47.619 0.00 0.00 34.41 5.24
129 130 1.737236 GTCATTCTGCCATGTACGCAA 59.263 47.619 0.00 0.00 35.40 4.85
130 131 1.737236 TCATTCTGCCATGTACGCAAC 59.263 47.619 0.00 0.00 35.40 4.17
131 132 0.726827 ATTCTGCCATGTACGCAACG 59.273 50.000 0.00 0.00 35.40 4.10
132 133 0.319986 TTCTGCCATGTACGCAACGA 60.320 50.000 0.00 0.00 35.40 3.85
133 134 1.011968 TCTGCCATGTACGCAACGAC 61.012 55.000 0.00 0.00 35.40 4.34
134 135 1.966493 CTGCCATGTACGCAACGACC 61.966 60.000 0.00 0.00 35.40 4.79
135 136 3.077705 CCATGTACGCAACGACCG 58.922 61.111 0.00 0.00 0.00 4.79
136 137 1.444724 CCATGTACGCAACGACCGA 60.445 57.895 0.00 0.00 0.00 4.69
137 138 1.410737 CCATGTACGCAACGACCGAG 61.411 60.000 0.00 0.00 0.00 4.63
138 139 1.804326 ATGTACGCAACGACCGAGC 60.804 57.895 0.00 0.00 0.00 5.03
144 145 4.695231 CAACGACCGAGCGACCGT 62.695 66.667 3.95 4.32 36.77 4.83
145 146 4.695231 AACGACCGAGCGACCGTG 62.695 66.667 9.40 0.00 35.28 4.94
147 148 4.695231 CGACCGAGCGACCGTGTT 62.695 66.667 0.00 0.00 0.00 3.32
148 149 2.355481 GACCGAGCGACCGTGTTT 60.355 61.111 0.00 0.00 0.00 2.83
149 150 1.952635 GACCGAGCGACCGTGTTTT 60.953 57.895 0.00 0.00 0.00 2.43
150 151 1.493134 GACCGAGCGACCGTGTTTTT 61.493 55.000 0.00 0.00 0.00 1.94
151 152 0.249405 ACCGAGCGACCGTGTTTTTA 60.249 50.000 0.00 0.00 0.00 1.52
152 153 0.162294 CCGAGCGACCGTGTTTTTAC 59.838 55.000 0.00 0.00 0.00 2.01
153 154 0.854062 CGAGCGACCGTGTTTTTACA 59.146 50.000 0.00 0.00 0.00 2.41
154 155 1.458064 CGAGCGACCGTGTTTTTACAT 59.542 47.619 0.00 0.00 0.00 2.29
155 156 2.471749 CGAGCGACCGTGTTTTTACATC 60.472 50.000 0.00 0.00 0.00 3.06
156 157 2.477375 GAGCGACCGTGTTTTTACATCA 59.523 45.455 0.00 0.00 0.00 3.07
157 158 3.071479 AGCGACCGTGTTTTTACATCAT 58.929 40.909 0.00 0.00 0.00 2.45
158 159 3.124636 AGCGACCGTGTTTTTACATCATC 59.875 43.478 0.00 0.00 0.00 2.92
159 160 3.124636 GCGACCGTGTTTTTACATCATCT 59.875 43.478 0.00 0.00 0.00 2.90
160 161 4.637968 CGACCGTGTTTTTACATCATCTG 58.362 43.478 0.00 0.00 0.00 2.90
161 162 4.435518 CGACCGTGTTTTTACATCATCTGG 60.436 45.833 0.00 0.00 0.00 3.86
162 163 3.756434 ACCGTGTTTTTACATCATCTGGG 59.244 43.478 0.00 0.00 0.00 4.45
163 164 4.006989 CCGTGTTTTTACATCATCTGGGA 58.993 43.478 0.00 0.00 0.00 4.37
164 165 4.094887 CCGTGTTTTTACATCATCTGGGAG 59.905 45.833 0.00 0.00 0.00 4.30
165 166 4.094887 CGTGTTTTTACATCATCTGGGAGG 59.905 45.833 0.00 0.00 0.00 4.30
166 167 5.010282 GTGTTTTTACATCATCTGGGAGGT 58.990 41.667 0.00 0.00 35.72 3.85
167 168 5.009631 TGTTTTTACATCATCTGGGAGGTG 58.990 41.667 0.00 0.00 33.35 4.00
168 169 3.931907 TTTACATCATCTGGGAGGTGG 57.068 47.619 0.00 0.00 33.35 4.61
169 170 2.866923 TACATCATCTGGGAGGTGGA 57.133 50.000 0.00 0.00 33.35 4.02
170 171 1.504912 ACATCATCTGGGAGGTGGAG 58.495 55.000 0.00 0.00 29.46 3.86
171 172 1.008815 ACATCATCTGGGAGGTGGAGA 59.991 52.381 0.00 0.00 29.46 3.71
172 173 2.336891 CATCATCTGGGAGGTGGAGAT 58.663 52.381 0.00 0.00 0.00 2.75
173 174 3.116590 ACATCATCTGGGAGGTGGAGATA 60.117 47.826 0.00 0.00 29.46 1.98
174 175 2.964209 TCATCTGGGAGGTGGAGATAC 58.036 52.381 0.00 0.00 0.00 2.24
175 176 2.247372 TCATCTGGGAGGTGGAGATACA 59.753 50.000 0.00 0.00 0.00 2.29
176 177 2.940514 TCTGGGAGGTGGAGATACAA 57.059 50.000 0.00 0.00 0.00 2.41
177 178 3.199442 TCTGGGAGGTGGAGATACAAA 57.801 47.619 0.00 0.00 0.00 2.83
178 179 3.736094 TCTGGGAGGTGGAGATACAAAT 58.264 45.455 0.00 0.00 0.00 2.32
179 180 4.111577 TCTGGGAGGTGGAGATACAAATT 58.888 43.478 0.00 0.00 0.00 1.82
180 181 4.540099 TCTGGGAGGTGGAGATACAAATTT 59.460 41.667 0.00 0.00 0.00 1.82
181 182 4.599041 TGGGAGGTGGAGATACAAATTTG 58.401 43.478 16.67 16.67 0.00 2.32
182 183 4.044065 TGGGAGGTGGAGATACAAATTTGT 59.956 41.667 25.99 25.99 44.86 2.83
183 184 5.251932 TGGGAGGTGGAGATACAAATTTGTA 59.748 40.000 28.30 28.30 46.55 2.41
197 198 7.346751 ACAAATTTGTATCTTCAGGTGTTGT 57.653 32.000 22.10 0.00 40.16 3.32
198 199 8.458573 ACAAATTTGTATCTTCAGGTGTTGTA 57.541 30.769 22.10 0.00 40.16 2.41
199 200 9.077885 ACAAATTTGTATCTTCAGGTGTTGTAT 57.922 29.630 22.10 0.00 40.16 2.29
200 201 9.912634 CAAATTTGTATCTTCAGGTGTTGTATT 57.087 29.630 10.15 0.00 0.00 1.89
216 217 9.946165 GGTGTTGTATTTTATAATACTTGGAGC 57.054 33.333 14.60 5.22 44.20 4.70
225 226 9.851686 TTTTATAATACTTGGAGCAGATGATGT 57.148 29.630 0.00 0.00 0.00 3.06
227 228 9.929180 TTATAATACTTGGAGCAGATGATGTAC 57.071 33.333 0.00 0.00 0.00 2.90
228 229 6.491714 AATACTTGGAGCAGATGATGTACT 57.508 37.500 0.00 0.00 0.00 2.73
229 230 4.833478 ACTTGGAGCAGATGATGTACTT 57.167 40.909 0.00 0.00 0.00 2.24
230 231 5.171339 ACTTGGAGCAGATGATGTACTTT 57.829 39.130 0.00 0.00 0.00 2.66
231 232 5.564550 ACTTGGAGCAGATGATGTACTTTT 58.435 37.500 0.00 0.00 0.00 2.27
232 233 6.006449 ACTTGGAGCAGATGATGTACTTTTT 58.994 36.000 0.00 0.00 0.00 1.94
262 263 6.569179 ACATTATCTGTTAAAAAGGTGCGT 57.431 33.333 0.00 0.00 32.90 5.24
263 264 6.977213 ACATTATCTGTTAAAAAGGTGCGTT 58.023 32.000 0.00 0.00 32.90 4.84
264 265 7.430441 ACATTATCTGTTAAAAAGGTGCGTTT 58.570 30.769 0.00 0.00 32.90 3.60
265 266 7.923878 ACATTATCTGTTAAAAAGGTGCGTTTT 59.076 29.630 0.00 0.00 32.90 2.43
266 267 8.760569 CATTATCTGTTAAAAAGGTGCGTTTTT 58.239 29.630 16.12 16.12 41.43 1.94
267 268 6.582437 ATCTGTTAAAAAGGTGCGTTTTTG 57.418 33.333 19.28 7.93 39.43 2.44
268 269 4.865365 TCTGTTAAAAAGGTGCGTTTTTGG 59.135 37.500 19.28 10.50 39.43 3.28
269 270 3.933332 TGTTAAAAAGGTGCGTTTTTGGG 59.067 39.130 19.28 0.00 39.43 4.12
270 271 1.374560 AAAAAGGTGCGTTTTTGGGC 58.625 45.000 12.58 0.00 38.04 5.36
271 272 0.462937 AAAAGGTGCGTTTTTGGGCC 60.463 50.000 0.00 0.00 0.00 5.80
272 273 1.334384 AAAGGTGCGTTTTTGGGCCT 61.334 50.000 4.53 0.00 0.00 5.19
273 274 1.334384 AAGGTGCGTTTTTGGGCCTT 61.334 50.000 4.53 0.00 0.00 4.35
274 275 0.468400 AGGTGCGTTTTTGGGCCTTA 60.468 50.000 4.53 0.00 0.00 2.69
275 276 0.389757 GGTGCGTTTTTGGGCCTTAA 59.610 50.000 4.53 0.00 0.00 1.85
276 277 1.202545 GGTGCGTTTTTGGGCCTTAAA 60.203 47.619 4.53 1.70 0.00 1.52
277 278 2.131972 GTGCGTTTTTGGGCCTTAAAG 58.868 47.619 4.53 0.00 0.00 1.85
278 279 2.032620 TGCGTTTTTGGGCCTTAAAGA 58.967 42.857 4.53 0.00 0.00 2.52
279 280 2.630580 TGCGTTTTTGGGCCTTAAAGAT 59.369 40.909 4.53 0.00 0.00 2.40
280 281 2.993220 GCGTTTTTGGGCCTTAAAGATG 59.007 45.455 4.53 7.01 0.00 2.90
281 282 3.554129 GCGTTTTTGGGCCTTAAAGATGT 60.554 43.478 4.53 0.00 0.00 3.06
282 283 4.234574 CGTTTTTGGGCCTTAAAGATGTC 58.765 43.478 4.53 0.00 0.00 3.06
283 284 4.261825 CGTTTTTGGGCCTTAAAGATGTCA 60.262 41.667 4.53 0.00 0.00 3.58
284 285 5.606505 GTTTTTGGGCCTTAAAGATGTCAA 58.393 37.500 4.53 0.00 0.00 3.18
285 286 5.878406 TTTTGGGCCTTAAAGATGTCAAA 57.122 34.783 4.53 0.00 0.00 2.69
286 287 5.878406 TTTGGGCCTTAAAGATGTCAAAA 57.122 34.783 4.53 0.00 0.00 2.44
287 288 5.878406 TTGGGCCTTAAAGATGTCAAAAA 57.122 34.783 4.53 0.00 0.00 1.94
324 325 9.491406 ACATCTATATCTTCTATTGGAGATGCT 57.509 33.333 8.09 0.00 41.69 3.79
325 326 9.970395 CATCTATATCTTCTATTGGAGATGCTC 57.030 37.037 8.09 0.00 34.47 4.26
326 327 9.940974 ATCTATATCTTCTATTGGAGATGCTCT 57.059 33.333 8.09 0.00 32.88 4.09
331 332 6.918626 TCTTCTATTGGAGATGCTCTAATCG 58.081 40.000 8.94 4.50 40.07 3.34
332 333 6.491745 TCTTCTATTGGAGATGCTCTAATCGT 59.508 38.462 8.94 0.00 40.07 3.73
333 334 7.665974 TCTTCTATTGGAGATGCTCTAATCGTA 59.334 37.037 8.94 0.00 40.07 3.43
334 335 7.946381 TCTATTGGAGATGCTCTAATCGTAT 57.054 36.000 8.94 0.00 40.07 3.06
335 336 9.462606 TTCTATTGGAGATGCTCTAATCGTATA 57.537 33.333 8.94 0.00 40.07 1.47
336 337 9.634021 TCTATTGGAGATGCTCTAATCGTATAT 57.366 33.333 8.94 0.00 40.07 0.86
339 340 8.575649 TTGGAGATGCTCTAATCGTATATACA 57.424 34.615 13.22 1.17 0.00 2.29
340 341 8.575649 TGGAGATGCTCTAATCGTATATACAA 57.424 34.615 13.22 0.00 0.00 2.41
341 342 9.190317 TGGAGATGCTCTAATCGTATATACAAT 57.810 33.333 13.22 0.00 0.00 2.71
387 388 4.576053 TGCATCGAATATTTGGTTCTCTGG 59.424 41.667 2.78 0.00 0.00 3.86
388 389 4.816385 GCATCGAATATTTGGTTCTCTGGA 59.184 41.667 2.78 0.00 0.00 3.86
420 421 1.226717 CGTTCCGAGTAGAGCTGCC 60.227 63.158 0.00 0.00 0.00 4.85
632 644 1.345415 AGCGGTTCGAGGGTTTTAGAA 59.655 47.619 0.00 0.00 0.00 2.10
769 781 2.222013 GGTTGTTCTCCGGGGAGGT 61.222 63.158 14.50 0.00 42.20 3.85
830 842 4.779733 GGCCGAGGAGGGTGAGGA 62.780 72.222 0.00 0.00 41.48 3.71
833 845 1.755008 CCGAGGAGGGTGAGGAGAC 60.755 68.421 0.00 0.00 35.97 3.36
919 931 0.391966 GGCGTCAAGGTACCTATCCC 59.608 60.000 16.67 7.97 0.00 3.85
925 937 4.548669 GTCAAGGTACCTATCCCTCTCTT 58.451 47.826 16.67 0.00 0.00 2.85
928 940 3.834938 AGGTACCTATCCCTCTCTTTCG 58.165 50.000 14.41 0.00 0.00 3.46
929 941 3.204831 AGGTACCTATCCCTCTCTTTCGT 59.795 47.826 14.41 0.00 0.00 3.85
933 945 4.354662 ACCTATCCCTCTCTTTCGTTCTT 58.645 43.478 0.00 0.00 0.00 2.52
958 973 0.530650 CTCTCTCGCTCTCGCTCTCT 60.531 60.000 0.00 0.00 35.26 3.10
962 977 0.809636 CTCGCTCTCGCTCTCTCTCA 60.810 60.000 0.00 0.00 35.26 3.27
972 997 1.606668 GCTCTCTCTCACTCCCGTATG 59.393 57.143 0.00 0.00 0.00 2.39
982 1007 1.692519 ACTCCCGTATGTAATCAGGCC 59.307 52.381 0.00 0.00 0.00 5.19
1037 1062 1.344763 ACTCACCGGAACAGAAAGGAG 59.655 52.381 9.46 3.09 0.00 3.69
1040 1065 1.128188 ACCGGAACAGAAAGGAGCCT 61.128 55.000 9.46 0.00 0.00 4.58
1182 1215 0.897863 TAGGTGCAAATTGGGCGCTT 60.898 50.000 7.64 9.82 41.36 4.68
1183 1216 1.737735 GGTGCAAATTGGGCGCTTC 60.738 57.895 7.64 0.02 41.36 3.86
1244 1288 3.004752 TCCATTGCTTTAGGCTTCTCC 57.995 47.619 0.00 0.00 42.39 3.71
1250 1294 2.639839 TGCTTTAGGCTTCTCCTTGACT 59.360 45.455 0.00 0.00 44.75 3.41
1267 1311 7.918076 TCCTTGACTAGTCATTTCCATTTACT 58.082 34.615 25.68 0.00 39.64 2.24
1289 1333 6.817270 CTGCAAGTTATAATGCCACATTTC 57.183 37.500 8.26 0.00 41.87 2.17
1306 1350 4.872691 ACATTTCGCATCTTCGAGAGATTT 59.127 37.500 7.20 0.00 42.55 2.17
1321 1365 2.168728 GAGATTTCGAGGCTTGGTACCT 59.831 50.000 14.36 0.00 41.41 3.08
1338 1382 4.397103 GGTACCTTTAGCATGTTTGGGTAC 59.603 45.833 19.78 19.78 43.78 3.34
1351 1395 6.182507 TGTTTGGGTACTCTTCTTGTATGT 57.817 37.500 0.00 0.00 0.00 2.29
1800 1907 1.594331 GTCAGCGGAGTGGAAACTTT 58.406 50.000 0.00 0.00 0.00 2.66
1965 2072 3.118454 CGCCGCTTCATGAACCGT 61.118 61.111 19.01 0.00 0.00 4.83
1995 2102 5.167303 AGGTTAAAGAATGGAGAGTGGTC 57.833 43.478 0.00 0.00 0.00 4.02
2164 2271 2.029290 GTGAGTGTTCCACGTAGACCAT 60.029 50.000 0.00 0.00 39.64 3.55
2167 2274 4.281435 TGAGTGTTCCACGTAGACCATAAA 59.719 41.667 0.00 0.00 39.64 1.40
2313 2423 7.066766 CCTTCCTATATTAAGATGCCATCAAGC 59.933 40.741 7.56 0.00 0.00 4.01
2395 2505 9.112725 CTTTCAACTCCAATTTGAAGGAAAATT 57.887 29.630 0.00 0.00 42.44 1.82
2574 2684 9.747457 AACACCTGTTAGTTGCACTTGCATAAC 62.747 40.741 15.97 15.97 43.00 1.89
2586 2893 5.173854 GCACTTGCATAACACTGAGTTTTTC 59.826 40.000 0.00 0.00 40.22 2.29
2924 3233 2.826725 GGCCAGTGTACTGAGAAGTACT 59.173 50.000 13.36 0.00 46.59 2.73
2986 3295 9.778741 TTCATCATGTTCTGATAATAACCCTAC 57.221 33.333 0.00 0.00 42.91 3.18
3092 3401 5.527214 TGTTACTGAACTTGATGTTGTGGAG 59.473 40.000 0.00 0.00 39.30 3.86
3117 3426 9.678260 AGTCTAGCATGAAGAATTTGAAGTTAT 57.322 29.630 0.00 0.00 0.00 1.89
3246 3555 1.077285 CATGGAGCACATCTGCCCA 60.077 57.895 5.82 5.82 45.53 5.36
3503 3812 0.243907 GTTCTGCTGCGACACCTCTA 59.756 55.000 0.00 0.00 0.00 2.43
3707 4016 8.613060 CACAGTATGCTAGTGGAAATCAATAT 57.387 34.615 5.79 0.00 42.53 1.28
3957 4266 3.857549 GGCAACCTTTCTCTGGAATTC 57.142 47.619 0.00 0.00 0.00 2.17
4010 4319 2.427453 TCAGTCCGCCTCAAGAAGTATC 59.573 50.000 0.00 0.00 0.00 2.24
4097 4406 4.410555 ACTTTCCTGGAAGAACTGAAGTCT 59.589 41.667 9.42 0.00 34.07 3.24
4669 4978 5.714806 TCAGATGTATGGATGCCGAGTAATA 59.285 40.000 0.00 0.00 0.00 0.98
4901 5210 9.469807 CTACTGAGTTTATCATACATTCTGGAC 57.530 37.037 0.00 0.00 37.28 4.02
4976 5285 8.543293 TGGATAACTAGGTTAGCTAAGCTTAA 57.457 34.615 35.58 21.65 43.14 1.85
4994 5303 5.357032 AGCTTAAACATATGTAGGTTGGTGC 59.643 40.000 9.21 6.21 29.85 5.01
5279 5595 3.748568 CAGAACTAGGGTTGAGAGTTTGC 59.251 47.826 0.00 0.00 35.58 3.68
5496 5812 7.889873 AGCTTTGAAGAGAGCTAGAGTAATA 57.110 36.000 0.00 0.00 46.78 0.98
5558 5874 5.968254 TGGCAGTACGTGAGAACATTATAA 58.032 37.500 0.00 0.00 0.00 0.98
5717 6033 1.021202 GCAACCAGCATACGCCATAA 58.979 50.000 0.00 0.00 44.79 1.90
6242 6558 7.279313 GCAATTTGATTCTGTATCTTTTGCCAT 59.721 33.333 0.00 0.00 37.25 4.40
6282 6609 9.825972 CACAGTAGTTGTTGATTTATAAACTGG 57.174 33.333 0.00 0.00 38.16 4.00
6314 6641 9.019656 TGGCTGTAATAAACACAAAATACATCT 57.980 29.630 0.00 0.00 33.45 2.90
6341 6668 3.439440 GACCTGCCTTTGGTCCTTT 57.561 52.632 1.76 0.00 46.01 3.11
6342 6669 1.704641 GACCTGCCTTTGGTCCTTTT 58.295 50.000 1.76 0.00 46.01 2.27
6343 6670 1.613925 GACCTGCCTTTGGTCCTTTTC 59.386 52.381 1.76 0.00 46.01 2.29
6344 6671 1.217942 ACCTGCCTTTGGTCCTTTTCT 59.782 47.619 0.00 0.00 31.03 2.52
6345 6672 2.445525 ACCTGCCTTTGGTCCTTTTCTA 59.554 45.455 0.00 0.00 31.03 2.10
6346 6673 3.117284 ACCTGCCTTTGGTCCTTTTCTAA 60.117 43.478 0.00 0.00 31.03 2.10
6347 6674 3.895041 CCTGCCTTTGGTCCTTTTCTAAA 59.105 43.478 0.00 0.00 0.00 1.85
6348 6675 4.343814 CCTGCCTTTGGTCCTTTTCTAAAA 59.656 41.667 0.00 0.00 0.00 1.52
6349 6676 5.163353 CCTGCCTTTGGTCCTTTTCTAAAAA 60.163 40.000 0.00 0.00 0.00 1.94
6730 7062 3.253230 CGCAATGTTTCCATCCCTTTTC 58.747 45.455 0.00 0.00 0.00 2.29
6778 7293 0.539518 TAAGGCAGTAATGCTCCGCA 59.460 50.000 15.61 0.00 44.86 5.69
6880 7397 1.407989 CCAAGCCTGACTGAGGAATCC 60.408 57.143 0.00 0.00 46.33 3.01
6928 7445 8.258007 TCTATTGTTACTGATTCCGTTGATTCT 58.742 33.333 0.00 0.00 0.00 2.40
6929 7446 9.529325 CTATTGTTACTGATTCCGTTGATTCTA 57.471 33.333 0.00 0.00 0.00 2.10
6930 7447 7.591006 TTGTTACTGATTCCGTTGATTCTAC 57.409 36.000 0.00 0.00 0.00 2.59
6931 7448 6.931838 TGTTACTGATTCCGTTGATTCTACT 58.068 36.000 0.00 0.00 0.00 2.57
6932 7449 7.033791 TGTTACTGATTCCGTTGATTCTACTC 58.966 38.462 0.00 0.00 0.00 2.59
6933 7450 5.012328 ACTGATTCCGTTGATTCTACTCC 57.988 43.478 0.00 0.00 0.00 3.85
6934 7451 4.141914 ACTGATTCCGTTGATTCTACTCCC 60.142 45.833 0.00 0.00 0.00 4.30
6935 7452 4.030913 TGATTCCGTTGATTCTACTCCCT 58.969 43.478 0.00 0.00 0.00 4.20
6936 7453 4.099573 TGATTCCGTTGATTCTACTCCCTC 59.900 45.833 0.00 0.00 0.00 4.30
6937 7454 2.385803 TCCGTTGATTCTACTCCCTCC 58.614 52.381 0.00 0.00 0.00 4.30
6938 7455 1.067212 CCGTTGATTCTACTCCCTCCG 59.933 57.143 0.00 0.00 0.00 4.63
6939 7456 1.749634 CGTTGATTCTACTCCCTCCGT 59.250 52.381 0.00 0.00 0.00 4.69
6940 7457 2.165845 CGTTGATTCTACTCCCTCCGTT 59.834 50.000 0.00 0.00 0.00 4.44
6941 7458 3.734293 CGTTGATTCTACTCCCTCCGTTC 60.734 52.174 0.00 0.00 0.00 3.95
6942 7459 2.385803 TGATTCTACTCCCTCCGTTCC 58.614 52.381 0.00 0.00 0.00 3.62
6943 7460 2.024273 TGATTCTACTCCCTCCGTTCCT 60.024 50.000 0.00 0.00 0.00 3.36
6944 7461 3.203710 TGATTCTACTCCCTCCGTTCCTA 59.796 47.826 0.00 0.00 0.00 2.94
6945 7462 3.744940 TTCTACTCCCTCCGTTCCTAA 57.255 47.619 0.00 0.00 0.00 2.69
6946 7463 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
6947 7464 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
6948 7465 5.393068 TCTACTCCCTCCGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
6949 7466 5.961897 TCTACTCCCTCCGTTCCTAAATAT 58.038 41.667 0.00 0.00 0.00 1.28
6950 7467 7.095183 TCTACTCCCTCCGTTCCTAAATATA 57.905 40.000 0.00 0.00 0.00 0.86
6951 7468 7.529555 TCTACTCCCTCCGTTCCTAAATATAA 58.470 38.462 0.00 0.00 0.00 0.98
6952 7469 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
6953 7470 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
6954 7471 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
6955 7472 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
6956 7473 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
6957 7474 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
6958 7475 7.441458 CCCTCCGTTCCTAAATATAAGTCTTTG 59.559 40.741 0.00 0.00 0.00 2.77
6959 7476 7.985752 CCTCCGTTCCTAAATATAAGTCTTTGT 59.014 37.037 0.00 0.00 0.00 2.83
6974 7491 9.702253 ATAAGTCTTTGTAGAGATTCCACTAGA 57.298 33.333 0.00 0.00 0.00 2.43
6975 7492 8.602472 AAGTCTTTGTAGAGATTCCACTAGAT 57.398 34.615 0.00 0.00 0.00 1.98
6976 7493 8.006298 AGTCTTTGTAGAGATTCCACTAGATG 57.994 38.462 0.00 0.00 0.00 2.90
6990 7507 5.614923 CACTAGATGGACTACATACGGAG 57.385 47.826 0.00 0.00 40.72 4.63
6991 7508 4.073549 ACTAGATGGACTACATACGGAGC 58.926 47.826 0.00 0.00 40.72 4.70
6992 7509 2.945456 AGATGGACTACATACGGAGCA 58.055 47.619 0.00 0.00 40.72 4.26
6993 7510 3.296854 AGATGGACTACATACGGAGCAA 58.703 45.455 0.00 0.00 40.72 3.91
6994 7511 3.704566 AGATGGACTACATACGGAGCAAA 59.295 43.478 0.00 0.00 40.72 3.68
6995 7512 3.965379 TGGACTACATACGGAGCAAAA 57.035 42.857 0.00 0.00 0.00 2.44
6996 7513 4.481368 TGGACTACATACGGAGCAAAAT 57.519 40.909 0.00 0.00 0.00 1.82
6997 7514 4.188462 TGGACTACATACGGAGCAAAATG 58.812 43.478 0.00 0.00 0.00 2.32
6998 7515 4.081365 TGGACTACATACGGAGCAAAATGA 60.081 41.667 0.00 0.00 0.00 2.57
6999 7516 4.873827 GGACTACATACGGAGCAAAATGAA 59.126 41.667 0.00 0.00 0.00 2.57
7000 7517 5.527582 GGACTACATACGGAGCAAAATGAAT 59.472 40.000 0.00 0.00 0.00 2.57
7001 7518 6.363577 ACTACATACGGAGCAAAATGAATG 57.636 37.500 0.00 0.00 0.00 2.67
7002 7519 6.112734 ACTACATACGGAGCAAAATGAATGA 58.887 36.000 0.00 0.00 0.00 2.57
7003 7520 5.895636 ACATACGGAGCAAAATGAATGAA 57.104 34.783 0.00 0.00 0.00 2.57
7004 7521 6.455360 ACATACGGAGCAAAATGAATGAAT 57.545 33.333 0.00 0.00 0.00 2.57
7005 7522 6.498304 ACATACGGAGCAAAATGAATGAATC 58.502 36.000 0.00 0.00 0.00 2.52
7006 7523 6.319658 ACATACGGAGCAAAATGAATGAATCT 59.680 34.615 0.00 0.00 0.00 2.40
7007 7524 7.498900 ACATACGGAGCAAAATGAATGAATCTA 59.501 33.333 0.00 0.00 0.00 1.98
7008 7525 6.949352 ACGGAGCAAAATGAATGAATCTAT 57.051 33.333 0.00 0.00 0.00 1.98
7009 7526 9.725019 ATACGGAGCAAAATGAATGAATCTATA 57.275 29.630 0.00 0.00 0.00 1.31
7010 7527 7.865707 ACGGAGCAAAATGAATGAATCTATAC 58.134 34.615 0.00 0.00 0.00 1.47
7011 7528 7.716998 ACGGAGCAAAATGAATGAATCTATACT 59.283 33.333 0.00 0.00 0.00 2.12
7012 7529 8.562892 CGGAGCAAAATGAATGAATCTATACTT 58.437 33.333 0.00 0.00 0.00 2.24
7042 7559 7.956328 ACATCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
7043 7560 8.362464 ACATCTATATACATCCGTATGTGGTT 57.638 34.615 3.56 0.00 45.99 3.67
7044 7561 8.467598 ACATCTATATACATCCGTATGTGGTTC 58.532 37.037 3.56 0.00 45.99 3.62
7045 7562 8.466798 CATCTATATACATCCGTATGTGGTTCA 58.533 37.037 3.56 0.00 45.99 3.18
7046 7563 8.589701 TCTATATACATCCGTATGTGGTTCAT 57.410 34.615 3.56 0.00 45.99 2.57
7047 7564 9.689501 TCTATATACATCCGTATGTGGTTCATA 57.310 33.333 3.56 0.00 45.99 2.15
7048 7565 9.952188 CTATATACATCCGTATGTGGTTCATAG 57.048 37.037 3.56 0.80 45.99 2.23
7049 7566 6.665992 ATACATCCGTATGTGGTTCATAGT 57.334 37.500 3.56 0.00 45.99 2.12
7050 7567 4.693283 ACATCCGTATGTGGTTCATAGTG 58.307 43.478 0.00 0.00 44.79 2.74
7051 7568 3.812156 TCCGTATGTGGTTCATAGTGG 57.188 47.619 0.00 0.00 39.36 4.00
7052 7569 3.367321 TCCGTATGTGGTTCATAGTGGA 58.633 45.455 0.00 0.00 39.94 4.02
7053 7570 3.770388 TCCGTATGTGGTTCATAGTGGAA 59.230 43.478 0.00 0.00 39.60 3.53
7054 7571 4.407621 TCCGTATGTGGTTCATAGTGGAAT 59.592 41.667 0.00 0.00 39.60 3.01
7055 7572 4.750098 CCGTATGTGGTTCATAGTGGAATC 59.250 45.833 0.00 0.00 39.36 2.52
7056 7573 5.453339 CCGTATGTGGTTCATAGTGGAATCT 60.453 44.000 0.00 0.00 39.36 2.40
7057 7574 5.692204 CGTATGTGGTTCATAGTGGAATCTC 59.308 44.000 0.00 0.00 39.36 2.75
7058 7575 5.965033 ATGTGGTTCATAGTGGAATCTCT 57.035 39.130 0.00 0.00 34.67 3.10
7059 7576 7.255486 CGTATGTGGTTCATAGTGGAATCTCTA 60.255 40.741 0.00 0.00 39.36 2.43
7060 7577 6.222038 TGTGGTTCATAGTGGAATCTCTAC 57.778 41.667 0.00 0.00 0.00 2.59
7061 7578 5.719563 TGTGGTTCATAGTGGAATCTCTACA 59.280 40.000 0.00 0.00 29.47 2.74
7062 7579 6.212589 TGTGGTTCATAGTGGAATCTCTACAA 59.787 38.462 0.00 0.00 29.47 2.41
7063 7580 7.103641 GTGGTTCATAGTGGAATCTCTACAAA 58.896 38.462 0.00 0.00 29.47 2.83
7064 7581 7.278868 GTGGTTCATAGTGGAATCTCTACAAAG 59.721 40.741 0.00 0.00 29.47 2.77
7065 7582 7.180229 TGGTTCATAGTGGAATCTCTACAAAGA 59.820 37.037 0.00 0.00 29.47 2.52
7066 7583 7.492994 GGTTCATAGTGGAATCTCTACAAAGAC 59.507 40.741 0.00 0.00 29.47 3.01
7067 7584 7.962995 TCATAGTGGAATCTCTACAAAGACT 57.037 36.000 0.00 0.00 29.47 3.24
7068 7585 8.367660 TCATAGTGGAATCTCTACAAAGACTT 57.632 34.615 0.00 0.00 29.47 3.01
7069 7586 9.475620 TCATAGTGGAATCTCTACAAAGACTTA 57.524 33.333 0.00 0.00 29.47 2.24
7085 7602 9.892130 ACAAAGACTTATATTTAGGAACAGAGG 57.108 33.333 0.00 0.00 0.00 3.69
7125 7642 8.462016 GCTTGTTCACTATTAAATTCCTGTGAT 58.538 33.333 0.00 0.00 34.94 3.06
7343 7860 2.290577 GGTGAAGGTGAGCCTCTTGAAT 60.291 50.000 0.00 0.00 46.33 2.57
7357 7874 7.445945 AGCCTCTTGAATTAGCGATACTTTAT 58.554 34.615 0.00 0.00 0.00 1.40
7372 7889 8.006590 GCGATACTTTATGATGAATCAGTCAAC 58.993 37.037 0.00 0.00 40.50 3.18
7403 7920 0.670162 GTGCTTTGCTTCAGCTCCAA 59.330 50.000 0.00 0.00 42.66 3.53
7415 7932 6.051717 GCTTCAGCTCCAATATCTTGAAGTA 58.948 40.000 12.06 0.00 38.21 2.24
7417 7934 7.875041 GCTTCAGCTCCAATATCTTGAAGTATA 59.125 37.037 12.06 0.00 38.21 1.47
7453 7976 0.904865 TTCCAGGAGATGCCGAGTGT 60.905 55.000 0.00 0.00 43.43 3.55
7472 7995 1.135199 GTGACTCATAAGCGACGGGAA 60.135 52.381 0.00 0.00 0.00 3.97
7487 8010 3.508840 GAATGCCTCAACGCCCGG 61.509 66.667 0.00 0.00 0.00 5.73
7549 8072 3.632189 GGTGCTTCAAAGTGCTAACAAG 58.368 45.455 0.00 0.00 0.00 3.16
7656 8188 2.093711 TGCGCACCAGTGTATCTATGTT 60.094 45.455 5.66 0.00 0.00 2.71
7840 8376 4.454728 AAAACATCGTCCATTCATTGGG 57.545 40.909 0.00 0.00 46.45 4.12
7887 8424 9.708222 CTGTGATTTATTGCAGATTACAGTAAC 57.292 33.333 13.39 0.00 34.53 2.50
7905 8445 6.098695 ACAGTAACTGGTAGTAACAAGAACCA 59.901 38.462 0.00 0.00 39.66 3.67
7906 8446 6.987992 CAGTAACTGGTAGTAACAAGAACCAA 59.012 38.462 0.00 0.00 41.30 3.67
7941 8485 5.499139 TTATTCCACGCTGAAATTGGATC 57.501 39.130 0.00 0.00 39.21 3.36
7946 8490 2.095768 CACGCTGAAATTGGATCGTGTT 60.096 45.455 12.46 0.00 41.33 3.32
7969 8516 3.589654 ATGGCGTGCGTGCTGTAGT 62.590 57.895 0.00 0.00 34.52 2.73
7970 8517 2.126228 GGCGTGCGTGCTGTAGTA 60.126 61.111 0.00 0.00 34.52 1.82
7971 8518 2.158959 GGCGTGCGTGCTGTAGTAG 61.159 63.158 0.00 0.00 34.52 2.57
7972 8519 1.443872 GCGTGCGTGCTGTAGTAGT 60.444 57.895 0.00 0.00 0.00 2.73
7978 8529 3.985925 GTGCGTGCTGTAGTAGTAACTTT 59.014 43.478 0.00 0.00 37.15 2.66
7995 8546 0.320946 TTTAGTTGGCCTCGAACCCG 60.321 55.000 3.32 0.00 37.07 5.28
8436 8987 1.216178 GGTCTTGTACCGCCGCTTA 59.784 57.895 0.00 0.00 38.88 3.09
8742 9296 2.811317 GACGCGAGGCACTTCAGG 60.811 66.667 15.93 0.00 41.55 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 1.676014 GGGTGGAAGATGTTGACGGAG 60.676 57.143 0.00 0.00 0.00 4.63
15 16 0.323629 GGGTGGAAGATGTTGACGGA 59.676 55.000 0.00 0.00 0.00 4.69
16 17 0.036164 TGGGTGGAAGATGTTGACGG 59.964 55.000 0.00 0.00 0.00 4.79
17 18 2.009774 GATGGGTGGAAGATGTTGACG 58.990 52.381 0.00 0.00 0.00 4.35
18 19 2.025887 AGGATGGGTGGAAGATGTTGAC 60.026 50.000 0.00 0.00 0.00 3.18
19 20 2.278245 AGGATGGGTGGAAGATGTTGA 58.722 47.619 0.00 0.00 0.00 3.18
20 21 2.814805 AGGATGGGTGGAAGATGTTG 57.185 50.000 0.00 0.00 0.00 3.33
21 22 2.024941 GGAAGGATGGGTGGAAGATGTT 60.025 50.000 0.00 0.00 0.00 2.71
22 23 1.566231 GGAAGGATGGGTGGAAGATGT 59.434 52.381 0.00 0.00 0.00 3.06
23 24 1.849039 AGGAAGGATGGGTGGAAGATG 59.151 52.381 0.00 0.00 0.00 2.90
24 25 1.849039 CAGGAAGGATGGGTGGAAGAT 59.151 52.381 0.00 0.00 0.00 2.40
25 26 1.289160 CAGGAAGGATGGGTGGAAGA 58.711 55.000 0.00 0.00 0.00 2.87
26 27 0.995024 ACAGGAAGGATGGGTGGAAG 59.005 55.000 0.00 0.00 0.00 3.46
27 28 2.196595 CTACAGGAAGGATGGGTGGAA 58.803 52.381 0.00 0.00 0.00 3.53
28 29 1.879575 CTACAGGAAGGATGGGTGGA 58.120 55.000 0.00 0.00 0.00 4.02
29 30 0.181350 GCTACAGGAAGGATGGGTGG 59.819 60.000 0.00 0.00 0.00 4.61
30 31 0.911769 TGCTACAGGAAGGATGGGTG 59.088 55.000 0.00 0.00 0.00 4.61
31 32 0.912486 GTGCTACAGGAAGGATGGGT 59.088 55.000 0.00 0.00 0.00 4.51
32 33 0.179073 CGTGCTACAGGAAGGATGGG 60.179 60.000 0.00 0.00 0.00 4.00
33 34 0.179073 CCGTGCTACAGGAAGGATGG 60.179 60.000 0.00 0.00 37.20 3.51
34 35 0.537188 ACCGTGCTACAGGAAGGATG 59.463 55.000 9.54 0.00 37.20 3.51
35 36 1.207329 GAACCGTGCTACAGGAAGGAT 59.793 52.381 9.54 0.00 37.20 3.24
36 37 0.606604 GAACCGTGCTACAGGAAGGA 59.393 55.000 9.54 0.00 37.20 3.36
37 38 0.320374 TGAACCGTGCTACAGGAAGG 59.680 55.000 1.32 1.32 40.52 3.46
38 39 1.000955 AGTGAACCGTGCTACAGGAAG 59.999 52.381 0.00 0.00 0.00 3.46
39 40 1.045407 AGTGAACCGTGCTACAGGAA 58.955 50.000 0.00 0.00 0.00 3.36
40 41 1.000506 GAAGTGAACCGTGCTACAGGA 59.999 52.381 0.00 0.00 0.00 3.86
41 42 1.429463 GAAGTGAACCGTGCTACAGG 58.571 55.000 0.00 0.00 0.00 4.00
42 43 1.429463 GGAAGTGAACCGTGCTACAG 58.571 55.000 0.00 0.00 0.00 2.74
43 44 0.319211 CGGAAGTGAACCGTGCTACA 60.319 55.000 0.00 0.00 44.57 2.74
44 45 2.442084 CGGAAGTGAACCGTGCTAC 58.558 57.895 0.00 0.00 44.57 3.58
45 46 4.979204 CGGAAGTGAACCGTGCTA 57.021 55.556 0.00 0.00 44.57 3.49
51 52 0.818040 AGGTGTTGCGGAAGTGAACC 60.818 55.000 0.00 0.00 0.00 3.62
52 53 1.021968 AAGGTGTTGCGGAAGTGAAC 58.978 50.000 0.00 0.00 0.00 3.18
53 54 1.757682 AAAGGTGTTGCGGAAGTGAA 58.242 45.000 0.00 0.00 0.00 3.18
54 55 1.673920 GAAAAGGTGTTGCGGAAGTGA 59.326 47.619 0.00 0.00 0.00 3.41
55 56 1.676006 AGAAAAGGTGTTGCGGAAGTG 59.324 47.619 0.00 0.00 0.00 3.16
56 57 2.052782 AGAAAAGGTGTTGCGGAAGT 57.947 45.000 0.00 0.00 0.00 3.01
57 58 3.115554 CAAAGAAAAGGTGTTGCGGAAG 58.884 45.455 0.00 0.00 0.00 3.46
58 59 2.755655 TCAAAGAAAAGGTGTTGCGGAA 59.244 40.909 0.00 0.00 0.00 4.30
59 60 2.098443 GTCAAAGAAAAGGTGTTGCGGA 59.902 45.455 0.00 0.00 0.00 5.54
60 61 2.159310 TGTCAAAGAAAAGGTGTTGCGG 60.159 45.455 0.00 0.00 0.00 5.69
61 62 3.108144 CTGTCAAAGAAAAGGTGTTGCG 58.892 45.455 0.00 0.00 0.00 4.85
62 63 2.860136 GCTGTCAAAGAAAAGGTGTTGC 59.140 45.455 0.00 0.00 0.00 4.17
63 64 4.107622 CAGCTGTCAAAGAAAAGGTGTTG 58.892 43.478 5.25 0.00 34.32 3.33
64 65 4.016444 TCAGCTGTCAAAGAAAAGGTGTT 58.984 39.130 14.67 0.00 38.83 3.32
65 66 3.378427 GTCAGCTGTCAAAGAAAAGGTGT 59.622 43.478 14.67 0.00 38.83 4.16
66 67 3.378112 TGTCAGCTGTCAAAGAAAAGGTG 59.622 43.478 14.67 0.00 39.04 4.00
67 68 3.378427 GTGTCAGCTGTCAAAGAAAAGGT 59.622 43.478 15.31 0.00 0.00 3.50
68 69 3.629398 AGTGTCAGCTGTCAAAGAAAAGG 59.371 43.478 15.31 0.00 0.00 3.11
69 70 4.889832 AGTGTCAGCTGTCAAAGAAAAG 57.110 40.909 15.31 0.00 0.00 2.27
70 71 5.643379 AAAGTGTCAGCTGTCAAAGAAAA 57.357 34.783 15.31 0.00 0.00 2.29
71 72 5.643379 AAAAGTGTCAGCTGTCAAAGAAA 57.357 34.783 15.31 0.00 0.00 2.52
72 73 5.415701 AGAAAAAGTGTCAGCTGTCAAAGAA 59.584 36.000 15.31 0.00 0.00 2.52
73 74 4.943705 AGAAAAAGTGTCAGCTGTCAAAGA 59.056 37.500 15.31 0.00 0.00 2.52
74 75 5.032863 CAGAAAAAGTGTCAGCTGTCAAAG 58.967 41.667 15.31 0.00 0.00 2.77
75 76 4.458989 ACAGAAAAAGTGTCAGCTGTCAAA 59.541 37.500 15.31 0.00 31.54 2.69
76 77 4.009675 ACAGAAAAAGTGTCAGCTGTCAA 58.990 39.130 15.31 0.00 31.54 3.18
77 78 3.374988 CACAGAAAAAGTGTCAGCTGTCA 59.625 43.478 14.67 12.07 34.66 3.58
78 79 3.790123 GCACAGAAAAAGTGTCAGCTGTC 60.790 47.826 14.67 9.06 39.17 3.51
79 80 2.098117 GCACAGAAAAAGTGTCAGCTGT 59.902 45.455 14.67 0.00 39.17 4.40
80 81 2.724349 GCACAGAAAAAGTGTCAGCTG 58.276 47.619 7.63 7.63 39.17 4.24
81 82 1.331756 CGCACAGAAAAAGTGTCAGCT 59.668 47.619 0.00 0.00 39.17 4.24
82 83 1.064060 ACGCACAGAAAAAGTGTCAGC 59.936 47.619 0.00 0.00 39.17 4.26
83 84 2.708514 CACGCACAGAAAAAGTGTCAG 58.291 47.619 0.00 0.00 39.17 3.51
84 85 1.202132 GCACGCACAGAAAAAGTGTCA 60.202 47.619 0.00 0.00 39.17 3.58
85 86 1.202132 TGCACGCACAGAAAAAGTGTC 60.202 47.619 0.00 0.00 39.17 3.67
86 87 0.808125 TGCACGCACAGAAAAAGTGT 59.192 45.000 0.00 0.00 39.17 3.55
87 88 1.191096 GTGCACGCACAGAAAAAGTG 58.809 50.000 17.03 0.00 45.53 3.16
88 89 3.622459 GTGCACGCACAGAAAAAGT 57.378 47.368 17.03 0.00 45.53 2.66
95 96 5.953777 CAGAATGACAAGTGCACGCACAG 62.954 52.174 23.12 16.85 44.29 3.66
96 97 4.193155 CAGAATGACAAGTGCACGCACA 62.193 50.000 23.12 10.94 44.29 4.57
97 98 0.588252 AGAATGACAAGTGCACGCAC 59.412 50.000 14.28 14.28 46.50 5.34
98 99 0.587768 CAGAATGACAAGTGCACGCA 59.412 50.000 12.01 9.08 39.69 5.24
99 100 0.727122 GCAGAATGACAAGTGCACGC 60.727 55.000 12.01 0.30 39.69 5.34
100 101 3.373020 GCAGAATGACAAGTGCACG 57.627 52.632 12.01 0.00 39.69 5.34
110 111 1.737236 GTTGCGTACATGGCAGAATGA 59.263 47.619 0.00 0.00 42.12 2.57
111 112 1.529622 CGTTGCGTACATGGCAGAATG 60.530 52.381 0.00 0.00 42.12 2.67
112 113 0.726827 CGTTGCGTACATGGCAGAAT 59.273 50.000 0.00 0.00 42.12 2.40
113 114 0.319986 TCGTTGCGTACATGGCAGAA 60.320 50.000 0.00 0.00 42.12 3.02
114 115 1.011968 GTCGTTGCGTACATGGCAGA 61.012 55.000 0.00 0.00 42.12 4.26
115 116 1.419922 GTCGTTGCGTACATGGCAG 59.580 57.895 0.00 0.00 42.12 4.85
116 117 2.030401 GGTCGTTGCGTACATGGCA 61.030 57.895 0.00 0.00 38.93 4.92
117 118 2.782615 GGTCGTTGCGTACATGGC 59.217 61.111 0.00 0.00 0.00 4.40
118 119 1.410737 CTCGGTCGTTGCGTACATGG 61.411 60.000 0.00 0.00 0.00 3.66
119 120 1.988409 CTCGGTCGTTGCGTACATG 59.012 57.895 0.00 0.00 0.00 3.21
120 121 1.804326 GCTCGGTCGTTGCGTACAT 60.804 57.895 0.00 0.00 0.00 2.29
121 122 2.429571 GCTCGGTCGTTGCGTACA 60.430 61.111 0.00 0.00 0.00 2.90
122 123 3.530104 CGCTCGGTCGTTGCGTAC 61.530 66.667 18.44 0.00 44.00 3.67
127 128 4.695231 ACGGTCGCTCGGTCGTTG 62.695 66.667 5.40 0.00 31.38 4.10
128 129 4.695231 CACGGTCGCTCGGTCGTT 62.695 66.667 7.72 0.00 33.31 3.85
130 131 4.695231 AACACGGTCGCTCGGTCG 62.695 66.667 2.67 4.38 0.00 4.79
131 132 1.493134 AAAAACACGGTCGCTCGGTC 61.493 55.000 2.67 0.00 0.00 4.79
132 133 0.249405 TAAAAACACGGTCGCTCGGT 60.249 50.000 2.67 0.00 0.00 4.69
133 134 0.162294 GTAAAAACACGGTCGCTCGG 59.838 55.000 2.67 0.00 0.00 4.63
134 135 0.854062 TGTAAAAACACGGTCGCTCG 59.146 50.000 0.00 0.00 0.00 5.03
135 136 2.477375 TGATGTAAAAACACGGTCGCTC 59.523 45.455 0.00 0.00 0.00 5.03
136 137 2.485903 TGATGTAAAAACACGGTCGCT 58.514 42.857 0.00 0.00 0.00 4.93
137 138 2.953640 TGATGTAAAAACACGGTCGC 57.046 45.000 0.00 0.00 0.00 5.19
138 139 4.435518 CCAGATGATGTAAAAACACGGTCG 60.436 45.833 0.00 0.00 0.00 4.79
139 140 4.142687 CCCAGATGATGTAAAAACACGGTC 60.143 45.833 0.00 0.00 0.00 4.79
140 141 3.756434 CCCAGATGATGTAAAAACACGGT 59.244 43.478 0.00 0.00 0.00 4.83
141 142 4.006989 TCCCAGATGATGTAAAAACACGG 58.993 43.478 0.00 0.00 0.00 4.94
142 143 4.094887 CCTCCCAGATGATGTAAAAACACG 59.905 45.833 0.00 0.00 0.00 4.49
143 144 5.010282 ACCTCCCAGATGATGTAAAAACAC 58.990 41.667 0.00 0.00 0.00 3.32
144 145 5.009631 CACCTCCCAGATGATGTAAAAACA 58.990 41.667 0.00 0.00 0.00 2.83
145 146 4.399303 CCACCTCCCAGATGATGTAAAAAC 59.601 45.833 0.00 0.00 0.00 2.43
146 147 4.290985 TCCACCTCCCAGATGATGTAAAAA 59.709 41.667 0.00 0.00 0.00 1.94
147 148 3.849574 TCCACCTCCCAGATGATGTAAAA 59.150 43.478 0.00 0.00 0.00 1.52
148 149 3.455910 CTCCACCTCCCAGATGATGTAAA 59.544 47.826 0.00 0.00 0.00 2.01
149 150 3.041211 CTCCACCTCCCAGATGATGTAA 58.959 50.000 0.00 0.00 0.00 2.41
150 151 2.247372 TCTCCACCTCCCAGATGATGTA 59.753 50.000 0.00 0.00 0.00 2.29
151 152 1.008815 TCTCCACCTCCCAGATGATGT 59.991 52.381 0.00 0.00 0.00 3.06
152 153 1.798626 TCTCCACCTCCCAGATGATG 58.201 55.000 0.00 0.00 0.00 3.07
153 154 2.811322 ATCTCCACCTCCCAGATGAT 57.189 50.000 0.00 0.00 0.00 2.45
154 155 2.247372 TGTATCTCCACCTCCCAGATGA 59.753 50.000 0.00 0.00 0.00 2.92
155 156 2.682594 TGTATCTCCACCTCCCAGATG 58.317 52.381 0.00 0.00 0.00 2.90
156 157 3.421394 TTGTATCTCCACCTCCCAGAT 57.579 47.619 0.00 0.00 0.00 2.90
157 158 2.940514 TTGTATCTCCACCTCCCAGA 57.059 50.000 0.00 0.00 0.00 3.86
158 159 4.510167 AATTTGTATCTCCACCTCCCAG 57.490 45.455 0.00 0.00 0.00 4.45
159 160 4.044065 ACAAATTTGTATCTCCACCTCCCA 59.956 41.667 22.10 0.00 40.16 4.37
160 161 4.600062 ACAAATTTGTATCTCCACCTCCC 58.400 43.478 22.10 0.00 40.16 4.30
172 173 8.458573 ACAACACCTGAAGATACAAATTTGTA 57.541 30.769 28.30 28.30 46.55 2.41
173 174 7.346751 ACAACACCTGAAGATACAAATTTGT 57.653 32.000 25.99 25.99 44.86 2.83
174 175 9.912634 AATACAACACCTGAAGATACAAATTTG 57.087 29.630 16.67 16.67 0.00 2.32
190 191 9.946165 GCTCCAAGTATTATAAAATACAACACC 57.054 33.333 10.08 0.00 46.70 4.16
199 200 9.851686 ACATCATCTGCTCCAAGTATTATAAAA 57.148 29.630 0.00 0.00 0.00 1.52
201 202 9.929180 GTACATCATCTGCTCCAAGTATTATAA 57.071 33.333 0.00 0.00 0.00 0.98
202 203 9.314133 AGTACATCATCTGCTCCAAGTATTATA 57.686 33.333 0.00 0.00 0.00 0.98
203 204 8.200024 AGTACATCATCTGCTCCAAGTATTAT 57.800 34.615 0.00 0.00 0.00 1.28
204 205 7.603180 AGTACATCATCTGCTCCAAGTATTA 57.397 36.000 0.00 0.00 0.00 0.98
205 206 6.491714 AGTACATCATCTGCTCCAAGTATT 57.508 37.500 0.00 0.00 0.00 1.89
206 207 6.491714 AAGTACATCATCTGCTCCAAGTAT 57.508 37.500 0.00 0.00 0.00 2.12
207 208 5.939764 AAGTACATCATCTGCTCCAAGTA 57.060 39.130 0.00 0.00 0.00 2.24
208 209 4.833478 AAGTACATCATCTGCTCCAAGT 57.167 40.909 0.00 0.00 0.00 3.16
209 210 6.506500 AAAAAGTACATCATCTGCTCCAAG 57.493 37.500 0.00 0.00 0.00 3.61
236 237 9.386010 ACGCACCTTTTTAACAGATAATGTATA 57.614 29.630 0.00 0.00 43.00 1.47
237 238 8.276252 ACGCACCTTTTTAACAGATAATGTAT 57.724 30.769 0.00 0.00 43.00 2.29
238 239 7.675962 ACGCACCTTTTTAACAGATAATGTA 57.324 32.000 0.00 0.00 43.00 2.29
239 240 6.569179 ACGCACCTTTTTAACAGATAATGT 57.431 33.333 0.00 0.00 46.97 2.71
240 241 7.867445 AAACGCACCTTTTTAACAGATAATG 57.133 32.000 0.00 0.00 0.00 1.90
241 242 8.760569 CAAAAACGCACCTTTTTAACAGATAAT 58.239 29.630 0.00 0.00 32.66 1.28
242 243 7.222999 CCAAAAACGCACCTTTTTAACAGATAA 59.777 33.333 0.00 0.00 32.66 1.75
243 244 6.697892 CCAAAAACGCACCTTTTTAACAGATA 59.302 34.615 0.00 0.00 32.66 1.98
244 245 5.522097 CCAAAAACGCACCTTTTTAACAGAT 59.478 36.000 0.00 0.00 32.66 2.90
245 246 4.865365 CCAAAAACGCACCTTTTTAACAGA 59.135 37.500 0.00 0.00 32.66 3.41
246 247 4.033472 CCCAAAAACGCACCTTTTTAACAG 59.967 41.667 0.00 0.00 32.66 3.16
247 248 3.933332 CCCAAAAACGCACCTTTTTAACA 59.067 39.130 0.00 0.00 32.66 2.41
248 249 3.242478 GCCCAAAAACGCACCTTTTTAAC 60.242 43.478 0.00 0.00 32.66 2.01
249 250 2.937149 GCCCAAAAACGCACCTTTTTAA 59.063 40.909 0.00 0.00 32.66 1.52
250 251 2.552031 GCCCAAAAACGCACCTTTTTA 58.448 42.857 0.00 0.00 32.66 1.52
251 252 1.374560 GCCCAAAAACGCACCTTTTT 58.625 45.000 0.00 0.00 34.34 1.94
252 253 0.462937 GGCCCAAAAACGCACCTTTT 60.463 50.000 0.00 0.00 0.00 2.27
253 254 1.145156 GGCCCAAAAACGCACCTTT 59.855 52.632 0.00 0.00 0.00 3.11
254 255 1.334384 AAGGCCCAAAAACGCACCTT 61.334 50.000 0.00 0.00 32.73 3.50
255 256 0.468400 TAAGGCCCAAAAACGCACCT 60.468 50.000 0.00 0.00 0.00 4.00
256 257 0.389757 TTAAGGCCCAAAAACGCACC 59.610 50.000 0.00 0.00 0.00 5.01
257 258 2.131972 CTTTAAGGCCCAAAAACGCAC 58.868 47.619 0.00 0.00 0.00 5.34
258 259 2.032620 TCTTTAAGGCCCAAAAACGCA 58.967 42.857 0.00 0.00 0.00 5.24
259 260 2.804697 TCTTTAAGGCCCAAAAACGC 57.195 45.000 0.00 0.00 0.00 4.84
260 261 4.234574 GACATCTTTAAGGCCCAAAAACG 58.765 43.478 0.00 0.00 0.00 3.60
261 262 5.208463 TGACATCTTTAAGGCCCAAAAAC 57.792 39.130 0.00 0.00 0.00 2.43
262 263 5.878406 TTGACATCTTTAAGGCCCAAAAA 57.122 34.783 0.00 0.00 0.00 1.94
263 264 5.878406 TTTGACATCTTTAAGGCCCAAAA 57.122 34.783 0.00 0.00 0.00 2.44
264 265 5.878406 TTTTGACATCTTTAAGGCCCAAA 57.122 34.783 0.00 0.00 0.00 3.28
265 266 5.878406 TTTTTGACATCTTTAAGGCCCAA 57.122 34.783 0.00 0.00 0.00 4.12
298 299 9.491406 AGCATCTCCAATAGAAGATATAGATGT 57.509 33.333 0.00 0.00 40.62 3.06
299 300 9.970395 GAGCATCTCCAATAGAAGATATAGATG 57.030 37.037 0.00 0.00 41.16 2.90
360 361 7.541783 CAGAGAACCAAATATTCGATGCAAAAA 59.458 33.333 0.00 0.00 0.00 1.94
361 362 7.028962 CAGAGAACCAAATATTCGATGCAAAA 58.971 34.615 0.00 0.00 0.00 2.44
362 363 6.404623 CCAGAGAACCAAATATTCGATGCAAA 60.405 38.462 0.00 0.00 0.00 3.68
363 364 5.066375 CCAGAGAACCAAATATTCGATGCAA 59.934 40.000 0.00 0.00 0.00 4.08
364 365 4.576053 CCAGAGAACCAAATATTCGATGCA 59.424 41.667 0.00 0.00 0.00 3.96
365 366 4.816385 TCCAGAGAACCAAATATTCGATGC 59.184 41.667 0.00 0.00 0.00 3.91
366 367 6.763135 TCTTCCAGAGAACCAAATATTCGATG 59.237 38.462 0.00 0.00 0.00 3.84
367 368 6.889198 TCTTCCAGAGAACCAAATATTCGAT 58.111 36.000 0.00 0.00 0.00 3.59
368 369 6.294361 TCTTCCAGAGAACCAAATATTCGA 57.706 37.500 0.00 0.00 0.00 3.71
369 370 5.007136 GCTCTTCCAGAGAACCAAATATTCG 59.993 44.000 4.89 0.00 45.07 3.34
370 371 5.298026 GGCTCTTCCAGAGAACCAAATATTC 59.702 44.000 4.89 0.00 45.07 1.75
387 388 1.468914 GGAACGTGGAAATGGCTCTTC 59.531 52.381 0.00 0.00 0.00 2.87
388 389 1.534729 GGAACGTGGAAATGGCTCTT 58.465 50.000 0.00 0.00 0.00 2.85
455 459 1.215647 GGTCAGCTAGGTGACGGTG 59.784 63.158 36.00 9.27 46.72 4.94
632 644 1.726853 CGGAGAAAAAGGATGTCGCT 58.273 50.000 0.00 0.00 0.00 4.93
769 781 0.183971 CTCGCTTCCCTCTCCCTCTA 59.816 60.000 0.00 0.00 0.00 2.43
825 837 2.043852 GCCTCCTCCGTCTCCTCA 60.044 66.667 0.00 0.00 0.00 3.86
919 931 6.149474 AGAGAGAGAGAAAGAACGAAAGAGAG 59.851 42.308 0.00 0.00 0.00 3.20
925 937 3.120130 GCGAGAGAGAGAGAAAGAACGAA 60.120 47.826 0.00 0.00 0.00 3.85
928 940 3.689649 AGAGCGAGAGAGAGAGAAAGAAC 59.310 47.826 0.00 0.00 0.00 3.01
929 941 3.938963 GAGAGCGAGAGAGAGAGAAAGAA 59.061 47.826 0.00 0.00 0.00 2.52
933 945 1.934589 CGAGAGCGAGAGAGAGAGAA 58.065 55.000 0.00 0.00 40.82 2.87
958 973 3.889538 CCTGATTACATACGGGAGTGAGA 59.110 47.826 0.00 0.00 46.80 3.27
972 997 3.031736 TCTAGTGAGGTGGCCTGATTAC 58.968 50.000 3.32 0.00 31.76 1.89
1037 1062 1.545841 AAATCGAGGAAAACCCAGGC 58.454 50.000 0.00 0.00 37.41 4.85
1040 1065 3.702045 ACAACAAAATCGAGGAAAACCCA 59.298 39.130 0.00 0.00 37.41 4.51
1182 1215 0.597568 CACAGCAATTCCAAAGCGGA 59.402 50.000 0.00 0.00 44.40 5.54
1183 1216 0.314935 ACACAGCAATTCCAAAGCGG 59.685 50.000 0.00 0.00 0.00 5.52
1244 1288 7.119699 TGCAGTAAATGGAAATGACTAGTCAAG 59.880 37.037 28.43 7.23 43.58 3.02
1250 1294 7.759489 AACTTGCAGTAAATGGAAATGACTA 57.241 32.000 0.00 0.00 38.93 2.59
1267 1311 5.339177 CGAAATGTGGCATTATAACTTGCA 58.661 37.500 12.00 0.00 40.66 4.08
1289 1333 2.718536 CTCGAAATCTCTCGAAGATGCG 59.281 50.000 17.11 17.11 46.53 4.73
1306 1350 1.206371 GCTAAAGGTACCAAGCCTCGA 59.794 52.381 15.94 0.00 34.81 4.04
1321 1365 5.876357 AGAAGAGTACCCAAACATGCTAAA 58.124 37.500 0.00 0.00 0.00 1.85
1338 1382 9.817365 CAGAATAACAACAACATACAAGAAGAG 57.183 33.333 0.00 0.00 0.00 2.85
1965 2072 4.219115 TCCATTCTTTAACCTTGCCAACA 58.781 39.130 0.00 0.00 0.00 3.33
1995 2102 4.337555 CCTTTATTGCTGTCATCTTGGGAG 59.662 45.833 0.00 0.00 0.00 4.30
2097 2204 4.502016 TCTGTTCATCATCTGCAGAACTC 58.498 43.478 22.50 7.82 40.62 3.01
2164 2271 4.263462 TGGAAAGCAGGCAAGAGAGATTTA 60.263 41.667 0.00 0.00 0.00 1.40
2167 2274 1.632409 TGGAAAGCAGGCAAGAGAGAT 59.368 47.619 0.00 0.00 0.00 2.75
2286 2396 7.574021 TGATGGCATCTTAATATAGGAAGGT 57.426 36.000 26.49 0.00 0.00 3.50
2288 2398 7.828223 AGCTTGATGGCATCTTAATATAGGAAG 59.172 37.037 26.49 17.62 34.17 3.46
2334 2444 4.871513 TGATATAAGCACAAGGTAGCTCG 58.128 43.478 0.00 0.00 40.90 5.03
2395 2505 5.876357 ACCATTTCTAACAAAGGAGTGCTA 58.124 37.500 0.00 0.00 0.00 3.49
2574 2684 8.224169 CATCTATGCAAAAGAAAAACTCAGTG 57.776 34.615 6.25 0.00 0.00 3.66
2811 3120 8.874156 TGAGTCAATATTAGAATGGACAGCTAT 58.126 33.333 0.00 0.00 0.00 2.97
2924 3233 9.102757 GATGTAGATGAAAGATTGTTGCTAAGA 57.897 33.333 0.00 0.00 0.00 2.10
2986 3295 4.913924 GCTGTTGCTCAGAAATTTGTACAG 59.086 41.667 12.29 9.65 46.27 2.74
3092 3401 9.713740 CATAACTTCAAATTCTTCATGCTAGAC 57.286 33.333 0.00 0.00 0.00 2.59
3117 3426 1.135527 CGTAGTCGGGCTATCCAAACA 59.864 52.381 0.00 0.00 34.36 2.83
3246 3555 4.862018 CACGTTGTCAACAAAAGGAACATT 59.138 37.500 15.79 0.00 37.63 2.71
3707 4016 2.856231 ACCCCTTGGAGCCAATGTATTA 59.144 45.455 1.86 0.00 35.20 0.98
4010 4319 2.023673 TGAAACCCAGAAACAGCAGTG 58.976 47.619 0.00 0.00 0.00 3.66
4097 4406 2.230508 CTCAACCCTACGTGCTCTGTTA 59.769 50.000 0.00 0.00 0.00 2.41
4994 5303 3.820467 TGCCAGACACAAAATCTAGGTTG 59.180 43.478 0.00 0.00 0.00 3.77
5442 5758 4.764172 AGCTGGTGATAACTTGATGAGAC 58.236 43.478 0.00 0.00 0.00 3.36
5496 5812 4.146245 ACCCATTTCTCCCAATTTCCTT 57.854 40.909 0.00 0.00 0.00 3.36
5558 5874 4.395854 TCATACTGATTGCACGCAGAAAAT 59.604 37.500 18.89 8.46 36.07 1.82
5717 6033 4.767578 AACTGCAGGACACATCAGATAT 57.232 40.909 19.93 0.00 0.00 1.63
6242 6558 8.671384 ACAACTACTGTGCACTTTTTAGAATA 57.329 30.769 19.41 0.00 36.69 1.75
6282 6609 3.751175 TGTGTTTATTACAGCCACTCAGC 59.249 43.478 0.00 0.00 37.45 4.26
6314 6641 2.290896 CCAAAGGCAGGTCATAACTGGA 60.291 50.000 0.00 0.00 36.48 3.86
6347 6674 3.454082 TGAACCAAAGGCAGGTCATTTTT 59.546 39.130 0.00 0.00 38.76 1.94
6348 6675 3.037549 TGAACCAAAGGCAGGTCATTTT 58.962 40.909 0.00 0.00 38.76 1.82
6349 6676 2.676748 TGAACCAAAGGCAGGTCATTT 58.323 42.857 0.00 0.00 38.76 2.32
6350 6677 2.380064 TGAACCAAAGGCAGGTCATT 57.620 45.000 0.00 0.00 38.76 2.57
6351 6678 2.610438 ATGAACCAAAGGCAGGTCAT 57.390 45.000 0.00 0.00 38.76 3.06
6352 6679 2.364970 CAAATGAACCAAAGGCAGGTCA 59.635 45.455 0.00 0.00 38.76 4.02
6353 6680 2.365293 ACAAATGAACCAAAGGCAGGTC 59.635 45.455 0.00 0.00 38.76 3.85
6354 6681 2.365293 GACAAATGAACCAAAGGCAGGT 59.635 45.455 0.00 0.00 42.34 4.00
6355 6682 2.607771 CGACAAATGAACCAAAGGCAGG 60.608 50.000 0.00 0.00 0.00 4.85
6356 6683 2.664916 CGACAAATGAACCAAAGGCAG 58.335 47.619 0.00 0.00 0.00 4.85
6357 6684 1.269517 GCGACAAATGAACCAAAGGCA 60.270 47.619 0.00 0.00 0.00 4.75
6358 6685 1.269517 TGCGACAAATGAACCAAAGGC 60.270 47.619 0.00 0.00 0.00 4.35
6359 6686 2.791383 TGCGACAAATGAACCAAAGG 57.209 45.000 0.00 0.00 0.00 3.11
6360 6687 4.803088 TCTTTTGCGACAAATGAACCAAAG 59.197 37.500 14.10 5.06 0.00 2.77
6361 6688 4.748892 TCTTTTGCGACAAATGAACCAAA 58.251 34.783 14.10 0.00 0.00 3.28
6362 6689 4.377839 TCTTTTGCGACAAATGAACCAA 57.622 36.364 14.10 0.00 0.00 3.67
6363 6690 4.377839 TTCTTTTGCGACAAATGAACCA 57.622 36.364 19.62 7.61 0.00 3.67
6364 6691 6.454186 GCATATTCTTTTGCGACAAATGAACC 60.454 38.462 22.87 14.23 0.00 3.62
6365 6692 6.308766 AGCATATTCTTTTGCGACAAATGAAC 59.691 34.615 22.87 15.64 43.61 3.18
6366 6693 6.389091 AGCATATTCTTTTGCGACAAATGAA 58.611 32.000 22.75 22.75 43.61 2.57
6778 7293 7.309316 GCCTACTTCAGACTTAAGACTTGTACT 60.309 40.741 10.09 0.00 0.00 2.73
6880 7397 3.128242 ACGGTACAAAGATACAGGACTCG 59.872 47.826 0.00 0.00 0.00 4.18
6928 7445 7.300658 ACTTATATTTAGGAACGGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
6929 7446 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
6930 7447 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
6931 7448 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
6932 7449 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
6933 7450 7.985752 ACAAAGACTTATATTTAGGAACGGAGG 59.014 37.037 0.00 0.00 0.00 4.30
6934 7451 8.943909 ACAAAGACTTATATTTAGGAACGGAG 57.056 34.615 0.00 0.00 0.00 4.63
6948 7465 9.702253 TCTAGTGGAATCTCTACAAAGACTTAT 57.298 33.333 0.00 0.00 29.47 1.73
6949 7466 9.702253 ATCTAGTGGAATCTCTACAAAGACTTA 57.298 33.333 0.00 0.00 29.78 2.24
6950 7467 8.474025 CATCTAGTGGAATCTCTACAAAGACTT 58.526 37.037 0.00 0.00 29.78 3.01
6951 7468 8.006298 CATCTAGTGGAATCTCTACAAAGACT 57.994 38.462 0.00 0.00 29.78 3.24
6968 7485 4.083217 GCTCCGTATGTAGTCCATCTAGTG 60.083 50.000 0.00 0.00 34.86 2.74
6969 7486 4.073549 GCTCCGTATGTAGTCCATCTAGT 58.926 47.826 0.00 0.00 34.86 2.57
6970 7487 4.072839 TGCTCCGTATGTAGTCCATCTAG 58.927 47.826 0.00 0.00 34.86 2.43
6971 7488 4.094830 TGCTCCGTATGTAGTCCATCTA 57.905 45.455 0.00 0.00 34.86 1.98
6972 7489 2.945456 TGCTCCGTATGTAGTCCATCT 58.055 47.619 0.00 0.00 34.86 2.90
6973 7490 3.728076 TTGCTCCGTATGTAGTCCATC 57.272 47.619 0.00 0.00 34.86 3.51
6974 7491 4.481368 TTTTGCTCCGTATGTAGTCCAT 57.519 40.909 0.00 0.00 37.58 3.41
6975 7492 3.965379 TTTTGCTCCGTATGTAGTCCA 57.035 42.857 0.00 0.00 0.00 4.02
6976 7493 4.439057 TCATTTTGCTCCGTATGTAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
6977 7494 6.257849 TCATTCATTTTGCTCCGTATGTAGTC 59.742 38.462 0.00 0.00 0.00 2.59
6978 7495 6.112734 TCATTCATTTTGCTCCGTATGTAGT 58.887 36.000 0.00 0.00 0.00 2.73
6979 7496 6.603237 TCATTCATTTTGCTCCGTATGTAG 57.397 37.500 0.00 0.00 0.00 2.74
6980 7497 6.993786 TTCATTCATTTTGCTCCGTATGTA 57.006 33.333 0.00 0.00 0.00 2.29
6981 7498 5.895636 TTCATTCATTTTGCTCCGTATGT 57.104 34.783 0.00 0.00 0.00 2.29
6982 7499 6.732154 AGATTCATTCATTTTGCTCCGTATG 58.268 36.000 0.00 0.00 0.00 2.39
6983 7500 6.949352 AGATTCATTCATTTTGCTCCGTAT 57.051 33.333 0.00 0.00 0.00 3.06
6984 7501 8.988934 GTATAGATTCATTCATTTTGCTCCGTA 58.011 33.333 0.00 0.00 0.00 4.02
6985 7502 6.949352 ATAGATTCATTCATTTTGCTCCGT 57.051 33.333 0.00 0.00 0.00 4.69
6986 7503 8.092521 AGTATAGATTCATTCATTTTGCTCCG 57.907 34.615 0.00 0.00 0.00 4.63
7016 7533 9.642343 ACCACATACGGATGTATATAGATGTAT 57.358 33.333 14.23 0.00 44.82 2.29
7017 7534 9.470399 AACCACATACGGATGTATATAGATGTA 57.530 33.333 14.23 0.00 44.82 2.29
7018 7535 7.956328 ACCACATACGGATGTATATAGATGT 57.044 36.000 14.23 0.00 44.82 3.06
7019 7536 8.466798 TGAACCACATACGGATGTATATAGATG 58.533 37.037 14.23 0.00 44.82 2.90
7020 7537 8.589701 TGAACCACATACGGATGTATATAGAT 57.410 34.615 14.23 0.00 44.82 1.98
7021 7538 8.589701 ATGAACCACATACGGATGTATATAGA 57.410 34.615 14.23 0.00 44.82 1.98
7022 7539 9.952188 CTATGAACCACATACGGATGTATATAG 57.048 37.037 14.23 12.28 44.82 1.31
7023 7540 9.470399 ACTATGAACCACATACGGATGTATATA 57.530 33.333 14.23 7.10 44.82 0.86
7024 7541 8.251026 CACTATGAACCACATACGGATGTATAT 58.749 37.037 14.23 1.68 44.82 0.86
7025 7542 7.309560 CCACTATGAACCACATACGGATGTATA 60.310 40.741 14.23 6.48 44.82 1.47
7026 7543 6.455647 CACTATGAACCACATACGGATGTAT 58.544 40.000 14.23 5.54 44.82 2.29
7027 7544 5.221362 CCACTATGAACCACATACGGATGTA 60.221 44.000 14.23 0.00 44.82 2.29
7029 7546 4.058124 CCACTATGAACCACATACGGATG 58.942 47.826 5.94 5.94 40.07 3.51
7030 7547 3.964688 TCCACTATGAACCACATACGGAT 59.035 43.478 0.00 0.00 40.07 4.18
7031 7548 3.367321 TCCACTATGAACCACATACGGA 58.633 45.455 0.00 0.00 40.07 4.69
7032 7549 3.812156 TCCACTATGAACCACATACGG 57.188 47.619 0.00 0.00 40.07 4.02
7033 7550 5.601662 AGATTCCACTATGAACCACATACG 58.398 41.667 0.00 0.00 40.07 3.06
7034 7551 6.821388 AGAGATTCCACTATGAACCACATAC 58.179 40.000 0.00 0.00 40.07 2.39
7035 7552 7.563556 TGTAGAGATTCCACTATGAACCACATA 59.436 37.037 0.00 0.00 40.07 2.29
7036 7553 5.965033 AGAGATTCCACTATGAACCACAT 57.035 39.130 0.00 0.00 42.39 3.21
7037 7554 5.719563 TGTAGAGATTCCACTATGAACCACA 59.280 40.000 0.00 0.00 0.00 4.17
7038 7555 6.222038 TGTAGAGATTCCACTATGAACCAC 57.778 41.667 0.00 0.00 0.00 4.16
7039 7556 6.867519 TTGTAGAGATTCCACTATGAACCA 57.132 37.500 0.00 0.00 0.00 3.67
7040 7557 7.492994 GTCTTTGTAGAGATTCCACTATGAACC 59.507 40.741 0.00 0.00 0.00 3.62
7041 7558 8.254508 AGTCTTTGTAGAGATTCCACTATGAAC 58.745 37.037 0.00 0.00 0.00 3.18
7042 7559 8.367660 AGTCTTTGTAGAGATTCCACTATGAA 57.632 34.615 0.00 0.00 0.00 2.57
7043 7560 7.962995 AGTCTTTGTAGAGATTCCACTATGA 57.037 36.000 0.00 0.00 0.00 2.15
7059 7576 9.892130 CCTCTGTTCCTAAATATAAGTCTTTGT 57.108 33.333 0.00 0.00 0.00 2.83
7063 7580 9.495382 ACTTCCTCTGTTCCTAAATATAAGTCT 57.505 33.333 0.00 0.00 0.00 3.24
7070 7587 9.716556 AGAATCTACTTCCTCTGTTCCTAAATA 57.283 33.333 0.00 0.00 34.11 1.40
7071 7588 8.616799 AGAATCTACTTCCTCTGTTCCTAAAT 57.383 34.615 0.00 0.00 34.11 1.40
7072 7589 9.543231 TTAGAATCTACTTCCTCTGTTCCTAAA 57.457 33.333 0.00 0.00 34.11 1.85
7073 7590 9.191479 CTTAGAATCTACTTCCTCTGTTCCTAA 57.809 37.037 0.00 0.00 34.11 2.69
7074 7591 7.285858 GCTTAGAATCTACTTCCTCTGTTCCTA 59.714 40.741 0.00 0.00 34.11 2.94
7075 7592 6.097696 GCTTAGAATCTACTTCCTCTGTTCCT 59.902 42.308 0.00 0.00 34.11 3.36
7076 7593 6.097696 AGCTTAGAATCTACTTCCTCTGTTCC 59.902 42.308 0.00 0.00 34.11 3.62
7077 7594 7.107639 AGCTTAGAATCTACTTCCTCTGTTC 57.892 40.000 0.00 0.00 34.11 3.18
7078 7595 7.038658 ACAAGCTTAGAATCTACTTCCTCTGTT 60.039 37.037 0.00 0.00 34.11 3.16
7079 7596 6.439058 ACAAGCTTAGAATCTACTTCCTCTGT 59.561 38.462 0.00 0.00 34.11 3.41
7080 7597 6.872920 ACAAGCTTAGAATCTACTTCCTCTG 58.127 40.000 0.00 0.00 34.11 3.35
7081 7598 7.179338 TGAACAAGCTTAGAATCTACTTCCTCT 59.821 37.037 0.00 0.00 34.11 3.69
7082 7599 7.276878 GTGAACAAGCTTAGAATCTACTTCCTC 59.723 40.741 0.00 0.00 34.11 3.71
7083 7600 7.038658 AGTGAACAAGCTTAGAATCTACTTCCT 60.039 37.037 0.00 0.00 34.11 3.36
7084 7601 7.100409 AGTGAACAAGCTTAGAATCTACTTCC 58.900 38.462 0.00 0.00 34.11 3.46
7085 7602 9.810545 ATAGTGAACAAGCTTAGAATCTACTTC 57.189 33.333 0.00 0.00 0.00 3.01
7125 7642 4.935352 AGCAAGTGGTTAGCAAATGAAA 57.065 36.364 2.56 0.00 0.00 2.69
7343 7860 9.411801 GACTGATTCATCATAAAGTATCGCTAA 57.588 33.333 0.00 0.00 36.02 3.09
7357 7874 5.707298 GGAAGAAAGGTTGACTGATTCATCA 59.293 40.000 0.00 0.00 32.84 3.07
7372 7889 1.000171 GCAAAGCACAGGGAAGAAAGG 60.000 52.381 0.00 0.00 0.00 3.11
7453 7976 1.179152 TTCCCGTCGCTTATGAGTCA 58.821 50.000 0.00 0.00 0.00 3.41
7487 8010 4.445452 TCTTCCTTGCTGATGAATTTGC 57.555 40.909 0.00 0.00 0.00 3.68
7549 8072 1.882623 CCTTTGCTGGAGTTCCAAGTC 59.117 52.381 1.99 0.00 46.97 3.01
7567 8090 8.103305 ACAAAGTCACATATGTACAATCTTCCT 58.897 33.333 8.32 0.00 0.00 3.36
7656 8188 5.368230 TGGATAAGCACACCCTAACATATCA 59.632 40.000 0.00 0.00 0.00 2.15
7686 8218 1.710013 CACACGGCTACCAACTAGTG 58.290 55.000 0.00 0.00 35.89 2.74
7840 8376 2.489722 GGCCATTTTCTCCTCAGTCAAC 59.510 50.000 0.00 0.00 0.00 3.18
7887 8424 5.334879 GCATGTTGGTTCTTGTTACTACCAG 60.335 44.000 0.00 0.00 41.35 4.00
7905 8445 7.010367 CAGCGTGGAATAATATTTTTGCATGTT 59.990 33.333 23.26 18.39 34.02 2.71
7906 8446 6.476380 CAGCGTGGAATAATATTTTTGCATGT 59.524 34.615 23.26 13.40 34.02 3.21
7941 8485 2.555782 CACGCCATGGACAACACG 59.444 61.111 18.40 10.98 0.00 4.49
7969 8516 5.473039 GTTCGAGGCCAACTAAAGTTACTA 58.527 41.667 5.01 0.00 36.32 1.82
7970 8517 4.313282 GTTCGAGGCCAACTAAAGTTACT 58.687 43.478 5.01 0.00 36.32 2.24
7971 8518 3.434641 GGTTCGAGGCCAACTAAAGTTAC 59.565 47.826 5.01 0.00 36.32 2.50
7972 8519 3.557686 GGGTTCGAGGCCAACTAAAGTTA 60.558 47.826 5.01 0.00 36.32 2.24
7978 8529 1.880819 GACGGGTTCGAGGCCAACTA 61.881 60.000 5.01 0.00 40.11 2.24
7995 8546 2.167861 GGAGAGCGGCAACATCGAC 61.168 63.158 1.45 0.00 0.00 4.20
8145 8696 3.591254 GAACGAGAAGGCGGTGGCT 62.591 63.158 0.00 0.00 41.24 4.75
8229 8780 4.511246 ATCCCGGACGGCGACCTA 62.511 66.667 24.60 11.43 0.00 3.08
8742 9296 1.870901 CCGCTACGCCGTGAACTAC 60.871 63.158 0.00 0.00 0.00 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.