Multiple sequence alignment - TraesCS7D01G245600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G245600 chr7D 100.000 3385 0 0 1 3385 214347346 214350730 0.000000e+00 6252.0
1 TraesCS7D01G245600 chr7D 100.000 2513 0 0 3652 6164 214350997 214353509 0.000000e+00 4641.0
2 TraesCS7D01G245600 chr7D 100.000 51 0 0 1237 1287 577622201 577622251 1.830000e-15 95.3
3 TraesCS7D01G245600 chr7D 96.364 55 1 1 1237 1291 578021950 578021897 8.510000e-14 89.8
4 TraesCS7D01G245600 chr7D 95.122 41 2 0 527 567 216836498 216836458 1.430000e-06 65.8
5 TraesCS7D01G245600 chr7B 95.472 2540 51 14 3652 6164 186817948 186815446 0.000000e+00 3995.0
6 TraesCS7D01G245600 chr7B 96.221 1085 29 8 2308 3385 186819056 186817977 0.000000e+00 1766.0
7 TraesCS7D01G245600 chr7B 93.544 821 36 8 398 1211 186821097 186820287 0.000000e+00 1206.0
8 TraesCS7D01G245600 chr7B 90.079 635 34 15 1572 2189 186819670 186819048 0.000000e+00 797.0
9 TraesCS7D01G245600 chr7B 97.600 250 6 0 1325 1574 186820246 186819997 4.410000e-116 429.0
10 TraesCS7D01G245600 chr7B 94.776 134 6 1 2185 2317 104514759 104514626 2.250000e-49 207.0
11 TraesCS7D01G245600 chr7B 86.885 61 6 2 518 577 183877787 183877846 3.990000e-07 67.6
12 TraesCS7D01G245600 chr7B 97.059 34 0 1 612 645 237497723 237497755 8.630000e-04 56.5
13 TraesCS7D01G245600 chr7A 95.347 2536 54 13 3652 6164 226755398 226757892 0.000000e+00 3971.0
14 TraesCS7D01G245600 chr7A 96.840 1076 24 7 2302 3369 226753990 226755063 0.000000e+00 1790.0
15 TraesCS7D01G245600 chr7A 95.137 658 21 5 588 1235 226752306 226752962 0.000000e+00 1027.0
16 TraesCS7D01G245600 chr7A 96.742 399 13 0 1283 1681 226752948 226753346 0.000000e+00 665.0
17 TraesCS7D01G245600 chr7A 89.773 528 29 16 1679 2194 226753431 226753945 0.000000e+00 652.0
18 TraesCS7D01G245600 chr7A 90.506 158 14 1 440 596 226751965 226752122 2.250000e-49 207.0
19 TraesCS7D01G245600 chr7A 90.196 51 5 0 527 577 229604316 229604266 3.990000e-07 67.6
20 TraesCS7D01G245600 chr2A 95.274 402 15 3 1 402 524864435 524864832 8.720000e-178 634.0
21 TraesCS7D01G245600 chr2A 94.776 134 6 1 2185 2317 425830070 425829937 2.250000e-49 207.0
22 TraesCS7D01G245600 chr2A 95.833 48 1 1 356 403 23949855 23949809 6.630000e-10 76.8
23 TraesCS7D01G245600 chr2A 96.774 31 1 0 616 646 430705464 430705494 1.100000e-02 52.8
24 TraesCS7D01G245600 chr2D 83.924 423 37 12 9 402 562585894 562585474 5.830000e-100 375.0
25 TraesCS7D01G245600 chr2D 96.124 129 5 0 2186 2314 451959025 451958897 1.740000e-50 211.0
26 TraesCS7D01G245600 chr2D 92.683 41 3 0 613 653 564292416 564292456 6.670000e-05 60.2
27 TraesCS7D01G245600 chr2D 100.000 28 0 0 613 640 46824378 46824405 1.100000e-02 52.8
28 TraesCS7D01G245600 chr2D 96.774 31 1 0 621 651 309065596 309065566 1.100000e-02 52.8
29 TraesCS7D01G245600 chr4A 82.683 410 48 13 1 402 581955184 581955578 5.920000e-90 342.0
30 TraesCS7D01G245600 chr2B 77.349 415 59 23 4 403 649214692 649215086 4.840000e-51 213.0
31 TraesCS7D01G245600 chr1A 95.522 134 5 1 2185 2317 244554862 244554995 4.840000e-51 213.0
32 TraesCS7D01G245600 chr3D 96.124 129 5 0 2185 2313 32145450 32145578 1.740000e-50 211.0
33 TraesCS7D01G245600 chr3D 82.632 190 33 0 1372 1561 552879000 552879189 1.060000e-37 169.0
34 TraesCS7D01G245600 chr5D 95.385 130 6 0 2186 2315 414245789 414245660 2.250000e-49 207.0
35 TraesCS7D01G245600 chr5D 93.939 66 3 1 7 71 10365397 10365462 1.410000e-16 99.0
36 TraesCS7D01G245600 chr5D 100.000 51 0 0 1237 1287 55734294 55734344 1.830000e-15 95.3
37 TraesCS7D01G245600 chr6B 92.361 144 9 2 2171 2313 177068813 177068671 2.910000e-48 204.0
38 TraesCS7D01G245600 chr1D 93.333 135 9 0 2185 2319 63025353 63025219 3.770000e-47 200.0
39 TraesCS7D01G245600 chr1D 100.000 51 0 0 1237 1287 390685693 390685643 1.830000e-15 95.3
40 TraesCS7D01G245600 chr1D 98.113 53 1 0 1235 1287 402144300 402144248 6.580000e-15 93.5
41 TraesCS7D01G245600 chr1B 94.531 128 7 0 2186 2313 446440637 446440510 1.360000e-46 198.0
42 TraesCS7D01G245600 chr3B 83.684 190 31 0 1372 1561 733748962 733749151 4.910000e-41 180.0
43 TraesCS7D01G245600 chr3A 82.632 190 33 0 1372 1561 689132551 689132740 1.060000e-37 169.0
44 TraesCS7D01G245600 chrUn 100.000 50 0 0 1238 1287 68791205 68791156 6.580000e-15 93.5
45 TraesCS7D01G245600 chr6D 98.113 53 1 0 1235 1287 71537656 71537708 6.580000e-15 93.5
46 TraesCS7D01G245600 chr6D 98.077 52 1 0 1236 1287 142860362 142860311 2.370000e-14 91.6
47 TraesCS7D01G245600 chr4D 96.364 55 1 1 1233 1287 20483882 20483829 8.510000e-14 89.8
48 TraesCS7D01G245600 chr4D 100.000 33 0 0 613 645 151408840 151408808 1.860000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G245600 chr7D 214347346 214353509 6163 False 5446.500000 6252 100.0000 1 6164 2 chr7D.!!$F2 6163
1 TraesCS7D01G245600 chr7B 186815446 186821097 5651 True 1638.600000 3995 94.5832 398 6164 5 chr7B.!!$R2 5766
2 TraesCS7D01G245600 chr7A 226751965 226757892 5927 False 1385.333333 3971 94.0575 440 6164 6 chr7A.!!$F1 5724

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
227 228 0.104725 AAGGGATAGAGGAGGGCTGG 60.105 60.000 0.00 0.0 0.00 4.85 F
573 575 0.108138 CCGAGTCCAGTGGTTGATCC 60.108 60.000 9.54 0.0 0.00 3.36 F
1281 1493 0.037303 CCCGGCCTCTGCATCATAAT 59.963 55.000 0.00 0.0 40.13 1.28 F
2200 2840 0.540365 AACGTACTCCCTCCGTTCCA 60.540 55.000 0.00 0.0 40.46 3.53 F
2201 2841 1.246737 ACGTACTCCCTCCGTTCCAC 61.247 60.000 0.00 0.0 0.00 4.02 F
2212 2852 1.280710 TCCGTTCCACAATACATGCCT 59.719 47.619 0.00 0.0 0.00 4.75 F
3186 3837 2.018542 TGCATAACGGGTTAGCACTC 57.981 50.000 9.88 0.0 30.29 3.51 F
4518 5241 2.951229 ACAAGGTCTTACAAGGTGGG 57.049 50.000 0.00 0.0 0.00 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1262 1474 0.037303 ATTATGATGCAGAGGCCGGG 59.963 55.000 2.18 0.00 40.13 5.73 R
2546 3190 0.095935 CCAAGAACTCGCGCATCTTG 59.904 55.000 27.08 27.08 46.06 3.02 R
3112 3763 4.287238 TCTTTTGTTCCTTGCGAAGAAC 57.713 40.909 8.31 8.31 33.73 3.01 R
4086 4790 2.815503 TCTCACATGGTCAGTTGCAATG 59.184 45.455 0.59 2.37 0.00 2.82 R
4197 4902 4.160439 TGCAAGTACCAACCAAACAATCAA 59.840 37.500 0.00 0.00 0.00 2.57 R
4232 4937 1.967319 ATAACAATGGCAGGCTACCG 58.033 50.000 0.00 0.00 0.00 4.02 R
4566 5289 0.535335 TGCGTCTCCCATAAGTCCAC 59.465 55.000 0.00 0.00 0.00 4.02 R
5847 6570 2.308866 AGTATACCCTTGCAGCCACTTT 59.691 45.455 0.00 0.00 0.00 2.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 1.908065 AAAACTGCACACAACTTCGC 58.092 45.000 0.00 0.00 0.00 4.70
28 29 1.094785 AAACTGCACACAACTTCGCT 58.905 45.000 0.00 0.00 0.00 4.93
29 30 0.657840 AACTGCACACAACTTCGCTC 59.342 50.000 0.00 0.00 0.00 5.03
30 31 0.179073 ACTGCACACAACTTCGCTCT 60.179 50.000 0.00 0.00 0.00 4.09
31 32 1.068588 ACTGCACACAACTTCGCTCTA 59.931 47.619 0.00 0.00 0.00 2.43
32 33 2.135139 CTGCACACAACTTCGCTCTAA 58.865 47.619 0.00 0.00 0.00 2.10
33 34 2.543848 CTGCACACAACTTCGCTCTAAA 59.456 45.455 0.00 0.00 0.00 1.85
34 35 2.939756 TGCACACAACTTCGCTCTAAAA 59.060 40.909 0.00 0.00 0.00 1.52
35 36 3.563808 TGCACACAACTTCGCTCTAAAAT 59.436 39.130 0.00 0.00 0.00 1.82
36 37 4.036262 TGCACACAACTTCGCTCTAAAATT 59.964 37.500 0.00 0.00 0.00 1.82
37 38 4.379793 GCACACAACTTCGCTCTAAAATTG 59.620 41.667 0.00 0.00 0.00 2.32
38 39 4.379793 CACACAACTTCGCTCTAAAATTGC 59.620 41.667 0.00 0.00 0.00 3.56
39 40 4.036262 ACACAACTTCGCTCTAAAATTGCA 59.964 37.500 0.00 0.00 0.00 4.08
40 41 4.379793 CACAACTTCGCTCTAAAATTGCAC 59.620 41.667 0.00 0.00 0.00 4.57
41 42 4.275936 ACAACTTCGCTCTAAAATTGCACT 59.724 37.500 0.00 0.00 0.00 4.40
42 43 5.215160 CAACTTCGCTCTAAAATTGCACTT 58.785 37.500 0.00 0.00 0.00 3.16
43 44 5.438761 ACTTCGCTCTAAAATTGCACTTT 57.561 34.783 0.00 0.00 0.00 2.66
44 45 5.831997 ACTTCGCTCTAAAATTGCACTTTT 58.168 33.333 17.50 17.50 33.17 2.27
45 46 6.273071 ACTTCGCTCTAAAATTGCACTTTTT 58.727 32.000 18.41 14.11 31.15 1.94
46 47 6.198966 ACTTCGCTCTAAAATTGCACTTTTTG 59.801 34.615 18.41 16.28 31.15 2.44
100 101 9.840427 GTGTAATTTTCACACTTATTGCATAGT 57.160 29.630 3.23 0.00 42.43 2.12
108 109 8.962884 TCACACTTATTGCATAGTATTCATGT 57.037 30.769 0.00 0.00 0.00 3.21
109 110 8.829612 TCACACTTATTGCATAGTATTCATGTG 58.170 33.333 6.97 6.97 34.05 3.21
110 111 8.615211 CACACTTATTGCATAGTATTCATGTGT 58.385 33.333 5.71 0.00 33.52 3.72
111 112 9.830975 ACACTTATTGCATAGTATTCATGTGTA 57.169 29.630 0.00 0.00 31.87 2.90
129 130 9.956640 TCATGTGTATACATTTATATGCATCCA 57.043 29.630 9.18 0.00 45.01 3.41
132 133 9.566432 TGTGTATACATTTATATGCATCCAACA 57.434 29.630 9.18 0.00 35.03 3.33
139 140 8.916062 ACATTTATATGCATCCAACATGAAAGA 58.084 29.630 0.19 0.00 35.03 2.52
140 141 9.752961 CATTTATATGCATCCAACATGAAAGAA 57.247 29.630 0.19 0.00 0.00 2.52
144 145 8.712285 ATATGCATCCAACATGAAAGAAAAAG 57.288 30.769 0.19 0.00 0.00 2.27
145 146 6.159299 TGCATCCAACATGAAAGAAAAAGA 57.841 33.333 0.00 0.00 0.00 2.52
146 147 6.580788 TGCATCCAACATGAAAGAAAAAGAA 58.419 32.000 0.00 0.00 0.00 2.52
147 148 7.046652 TGCATCCAACATGAAAGAAAAAGAAA 58.953 30.769 0.00 0.00 0.00 2.52
148 149 7.551974 TGCATCCAACATGAAAGAAAAAGAAAA 59.448 29.630 0.00 0.00 0.00 2.29
149 150 8.397148 GCATCCAACATGAAAGAAAAAGAAAAA 58.603 29.630 0.00 0.00 0.00 1.94
150 151 9.706846 CATCCAACATGAAAGAAAAAGAAAAAC 57.293 29.630 0.00 0.00 0.00 2.43
151 152 8.262715 TCCAACATGAAAGAAAAAGAAAAACC 57.737 30.769 0.00 0.00 0.00 3.27
152 153 7.880195 TCCAACATGAAAGAAAAAGAAAAACCA 59.120 29.630 0.00 0.00 0.00 3.67
153 154 8.510505 CCAACATGAAAGAAAAAGAAAAACCAA 58.489 29.630 0.00 0.00 0.00 3.67
154 155 9.328721 CAACATGAAAGAAAAAGAAAAACCAAC 57.671 29.630 0.00 0.00 0.00 3.77
155 156 8.846943 ACATGAAAGAAAAAGAAAAACCAACT 57.153 26.923 0.00 0.00 0.00 3.16
156 157 9.936759 ACATGAAAGAAAAAGAAAAACCAACTA 57.063 25.926 0.00 0.00 0.00 2.24
159 160 9.765795 TGAAAGAAAAAGAAAAACCAACTAACA 57.234 25.926 0.00 0.00 0.00 2.41
187 188 8.500837 AAAACTAAAAGCAAAAGCAAAAACAC 57.499 26.923 0.00 0.00 0.00 3.32
188 189 5.853081 ACTAAAAGCAAAAGCAAAAACACG 58.147 33.333 0.00 0.00 0.00 4.49
189 190 4.740741 AAAAGCAAAAGCAAAAACACGT 57.259 31.818 0.00 0.00 0.00 4.49
190 191 5.847670 AAAAGCAAAAGCAAAAACACGTA 57.152 30.435 0.00 0.00 0.00 3.57
191 192 5.847670 AAAGCAAAAGCAAAAACACGTAA 57.152 30.435 0.00 0.00 0.00 3.18
192 193 5.847670 AAGCAAAAGCAAAAACACGTAAA 57.152 30.435 0.00 0.00 0.00 2.01
193 194 5.847670 AGCAAAAGCAAAAACACGTAAAA 57.152 30.435 0.00 0.00 0.00 1.52
194 195 6.229561 AGCAAAAGCAAAAACACGTAAAAA 57.770 29.167 0.00 0.00 0.00 1.94
195 196 6.074642 AGCAAAAGCAAAAACACGTAAAAAC 58.925 32.000 0.00 0.00 0.00 2.43
196 197 5.846473 GCAAAAGCAAAAACACGTAAAAACA 59.154 32.000 0.00 0.00 0.00 2.83
197 198 6.030900 GCAAAAGCAAAAACACGTAAAAACAG 59.969 34.615 0.00 0.00 0.00 3.16
198 199 7.284351 CAAAAGCAAAAACACGTAAAAACAGA 58.716 30.769 0.00 0.00 0.00 3.41
199 200 7.409465 AAAGCAAAAACACGTAAAAACAGAA 57.591 28.000 0.00 0.00 0.00 3.02
200 201 7.409465 AAGCAAAAACACGTAAAAACAGAAA 57.591 28.000 0.00 0.00 0.00 2.52
201 202 7.409465 AGCAAAAACACGTAAAAACAGAAAA 57.591 28.000 0.00 0.00 0.00 2.29
202 203 7.506474 AGCAAAAACACGTAAAAACAGAAAAG 58.494 30.769 0.00 0.00 0.00 2.27
203 204 7.382759 AGCAAAAACACGTAAAAACAGAAAAGA 59.617 29.630 0.00 0.00 0.00 2.52
204 205 8.004905 GCAAAAACACGTAAAAACAGAAAAGAA 58.995 29.630 0.00 0.00 0.00 2.52
205 206 9.851043 CAAAAACACGTAAAAACAGAAAAGAAA 57.149 25.926 0.00 0.00 0.00 2.52
206 207 9.852481 AAAAACACGTAAAAACAGAAAAGAAAC 57.148 25.926 0.00 0.00 0.00 2.78
207 208 8.576936 AAACACGTAAAAACAGAAAAGAAACA 57.423 26.923 0.00 0.00 0.00 2.83
208 209 8.576936 AACACGTAAAAACAGAAAAGAAACAA 57.423 26.923 0.00 0.00 0.00 2.83
209 210 8.576936 ACACGTAAAAACAGAAAAGAAACAAA 57.423 26.923 0.00 0.00 0.00 2.83
210 211 8.696175 ACACGTAAAAACAGAAAAGAAACAAAG 58.304 29.630 0.00 0.00 0.00 2.77
211 212 8.159709 CACGTAAAAACAGAAAAGAAACAAAGG 58.840 33.333 0.00 0.00 0.00 3.11
212 213 7.329962 ACGTAAAAACAGAAAAGAAACAAAGGG 59.670 33.333 0.00 0.00 0.00 3.95
213 214 7.542824 CGTAAAAACAGAAAAGAAACAAAGGGA 59.457 33.333 0.00 0.00 0.00 4.20
214 215 9.378551 GTAAAAACAGAAAAGAAACAAAGGGAT 57.621 29.630 0.00 0.00 0.00 3.85
216 217 9.599866 AAAAACAGAAAAGAAACAAAGGGATAG 57.400 29.630 0.00 0.00 0.00 2.08
217 218 8.533569 AAACAGAAAAGAAACAAAGGGATAGA 57.466 30.769 0.00 0.00 0.00 1.98
218 219 7.751768 ACAGAAAAGAAACAAAGGGATAGAG 57.248 36.000 0.00 0.00 0.00 2.43
219 220 6.717084 ACAGAAAAGAAACAAAGGGATAGAGG 59.283 38.462 0.00 0.00 0.00 3.69
220 221 6.942576 CAGAAAAGAAACAAAGGGATAGAGGA 59.057 38.462 0.00 0.00 0.00 3.71
221 222 7.120432 CAGAAAAGAAACAAAGGGATAGAGGAG 59.880 40.741 0.00 0.00 0.00 3.69
222 223 5.443230 AAGAAACAAAGGGATAGAGGAGG 57.557 43.478 0.00 0.00 0.00 4.30
223 224 3.783082 AGAAACAAAGGGATAGAGGAGGG 59.217 47.826 0.00 0.00 0.00 4.30
224 225 1.512735 ACAAAGGGATAGAGGAGGGC 58.487 55.000 0.00 0.00 0.00 5.19
225 226 1.010170 ACAAAGGGATAGAGGAGGGCT 59.990 52.381 0.00 0.00 0.00 5.19
226 227 1.419387 CAAAGGGATAGAGGAGGGCTG 59.581 57.143 0.00 0.00 0.00 4.85
227 228 0.104725 AAGGGATAGAGGAGGGCTGG 60.105 60.000 0.00 0.00 0.00 4.85
228 229 1.007238 AGGGATAGAGGAGGGCTGGA 61.007 60.000 0.00 0.00 0.00 3.86
229 230 0.118144 GGGATAGAGGAGGGCTGGAT 59.882 60.000 0.00 0.00 0.00 3.41
230 231 1.567357 GGATAGAGGAGGGCTGGATC 58.433 60.000 0.00 0.00 0.00 3.36
231 232 1.181786 GATAGAGGAGGGCTGGATCG 58.818 60.000 0.00 0.00 0.00 3.69
232 233 0.902516 ATAGAGGAGGGCTGGATCGC 60.903 60.000 0.00 0.00 0.00 4.58
233 234 2.298335 TAGAGGAGGGCTGGATCGCA 62.298 60.000 0.00 0.00 0.00 5.10
234 235 2.447379 AGGAGGGCTGGATCGCAT 60.447 61.111 0.00 0.00 0.00 4.73
235 236 2.281345 GGAGGGCTGGATCGCATG 60.281 66.667 0.00 0.00 0.00 4.06
236 237 2.281345 GAGGGCTGGATCGCATGG 60.281 66.667 0.00 0.00 0.00 3.66
237 238 3.092511 AGGGCTGGATCGCATGGT 61.093 61.111 0.00 0.00 0.00 3.55
238 239 2.124151 GGGCTGGATCGCATGGTT 60.124 61.111 0.00 0.00 0.00 3.67
239 240 1.148273 GGGCTGGATCGCATGGTTA 59.852 57.895 0.00 0.00 0.00 2.85
240 241 0.465460 GGGCTGGATCGCATGGTTAA 60.465 55.000 0.00 0.00 0.00 2.01
241 242 1.609208 GGCTGGATCGCATGGTTAAT 58.391 50.000 0.00 0.00 0.00 1.40
242 243 1.267806 GGCTGGATCGCATGGTTAATG 59.732 52.381 0.00 0.00 39.49 1.90
243 244 1.267806 GCTGGATCGCATGGTTAATGG 59.732 52.381 0.00 0.00 36.71 3.16
245 246 0.598065 GGATCGCATGGTTAATGGGC 59.402 55.000 0.00 0.00 46.25 5.36
246 247 1.609208 GATCGCATGGTTAATGGGCT 58.391 50.000 0.00 0.00 46.25 5.19
247 248 1.956477 GATCGCATGGTTAATGGGCTT 59.044 47.619 0.00 0.00 46.25 4.35
248 249 1.846007 TCGCATGGTTAATGGGCTTT 58.154 45.000 0.00 0.00 46.25 3.51
249 250 1.476085 TCGCATGGTTAATGGGCTTTG 59.524 47.619 0.00 0.00 46.25 2.77
250 251 1.471327 CGCATGGTTAATGGGCTTTGG 60.471 52.381 0.00 0.00 41.72 3.28
251 252 1.743431 GCATGGTTAATGGGCTTTGGC 60.743 52.381 0.00 0.00 36.71 4.52
268 269 4.850193 CCCAGTGGCCAATTGACT 57.150 55.556 7.24 0.00 0.00 3.41
269 270 2.269978 CCCAGTGGCCAATTGACTG 58.730 57.895 7.24 10.53 37.45 3.51
270 271 0.251297 CCCAGTGGCCAATTGACTGA 60.251 55.000 21.34 0.00 39.64 3.41
271 272 0.883833 CCAGTGGCCAATTGACTGAC 59.116 55.000 21.34 6.79 39.64 3.51
272 273 0.883833 CAGTGGCCAATTGACTGACC 59.116 55.000 7.24 7.06 39.64 4.02
273 274 0.251341 AGTGGCCAATTGACTGACCC 60.251 55.000 7.24 0.00 0.00 4.46
274 275 0.539438 GTGGCCAATTGACTGACCCA 60.539 55.000 7.24 0.85 0.00 4.51
275 276 0.187117 TGGCCAATTGACTGACCCAA 59.813 50.000 0.61 0.00 0.00 4.12
276 277 0.890683 GGCCAATTGACTGACCCAAG 59.109 55.000 7.12 0.00 0.00 3.61
277 278 0.244721 GCCAATTGACTGACCCAAGC 59.755 55.000 7.12 0.00 0.00 4.01
278 279 1.619654 CCAATTGACTGACCCAAGCA 58.380 50.000 7.12 0.00 0.00 3.91
279 280 1.270550 CCAATTGACTGACCCAAGCAC 59.729 52.381 7.12 0.00 0.00 4.40
280 281 1.955778 CAATTGACTGACCCAAGCACA 59.044 47.619 0.00 0.00 0.00 4.57
281 282 1.901591 ATTGACTGACCCAAGCACAG 58.098 50.000 0.00 0.00 37.62 3.66
282 283 0.819259 TTGACTGACCCAAGCACAGC 60.819 55.000 0.00 0.00 35.38 4.40
283 284 1.968540 GACTGACCCAAGCACAGCC 60.969 63.158 0.00 0.00 35.38 4.85
284 285 2.674380 CTGACCCAAGCACAGCCC 60.674 66.667 0.00 0.00 0.00 5.19
285 286 3.496309 CTGACCCAAGCACAGCCCA 62.496 63.158 0.00 0.00 0.00 5.36
286 287 2.203480 GACCCAAGCACAGCCCAA 60.203 61.111 0.00 0.00 0.00 4.12
287 288 1.607467 GACCCAAGCACAGCCCAAT 60.607 57.895 0.00 0.00 0.00 3.16
288 289 0.323360 GACCCAAGCACAGCCCAATA 60.323 55.000 0.00 0.00 0.00 1.90
289 290 0.336048 ACCCAAGCACAGCCCAATAT 59.664 50.000 0.00 0.00 0.00 1.28
290 291 1.568597 ACCCAAGCACAGCCCAATATA 59.431 47.619 0.00 0.00 0.00 0.86
291 292 1.956477 CCCAAGCACAGCCCAATATAC 59.044 52.381 0.00 0.00 0.00 1.47
292 293 2.653726 CCAAGCACAGCCCAATATACA 58.346 47.619 0.00 0.00 0.00 2.29
293 294 3.023119 CCAAGCACAGCCCAATATACAA 58.977 45.455 0.00 0.00 0.00 2.41
294 295 3.181487 CCAAGCACAGCCCAATATACAAC 60.181 47.826 0.00 0.00 0.00 3.32
295 296 3.364460 AGCACAGCCCAATATACAACA 57.636 42.857 0.00 0.00 0.00 3.33
296 297 3.016736 AGCACAGCCCAATATACAACAC 58.983 45.455 0.00 0.00 0.00 3.32
297 298 2.752354 GCACAGCCCAATATACAACACA 59.248 45.455 0.00 0.00 0.00 3.72
298 299 3.381272 GCACAGCCCAATATACAACACAT 59.619 43.478 0.00 0.00 0.00 3.21
299 300 4.734402 GCACAGCCCAATATACAACACATG 60.734 45.833 0.00 0.00 0.00 3.21
300 301 3.953612 ACAGCCCAATATACAACACATGG 59.046 43.478 0.00 0.00 0.00 3.66
301 302 2.958355 AGCCCAATATACAACACATGGC 59.042 45.455 0.00 0.00 36.62 4.40
302 303 2.692557 GCCCAATATACAACACATGGCA 59.307 45.455 0.00 0.00 36.40 4.92
303 304 3.243501 GCCCAATATACAACACATGGCAG 60.244 47.826 0.00 0.00 36.40 4.85
304 305 4.206375 CCCAATATACAACACATGGCAGA 58.794 43.478 0.00 0.00 0.00 4.26
305 306 4.644234 CCCAATATACAACACATGGCAGAA 59.356 41.667 0.00 0.00 0.00 3.02
306 307 5.126869 CCCAATATACAACACATGGCAGAAA 59.873 40.000 0.00 0.00 0.00 2.52
307 308 6.350864 CCCAATATACAACACATGGCAGAAAA 60.351 38.462 0.00 0.00 0.00 2.29
308 309 7.095910 CCAATATACAACACATGGCAGAAAAA 58.904 34.615 0.00 0.00 0.00 1.94
331 332 4.367386 AATGCAGCACAAATCTTAGAGC 57.633 40.909 0.00 0.00 0.00 4.09
332 333 2.781923 TGCAGCACAAATCTTAGAGCA 58.218 42.857 0.00 0.00 0.00 4.26
333 334 3.148412 TGCAGCACAAATCTTAGAGCAA 58.852 40.909 0.00 0.00 0.00 3.91
334 335 3.569277 TGCAGCACAAATCTTAGAGCAAA 59.431 39.130 0.00 0.00 0.00 3.68
335 336 4.037803 TGCAGCACAAATCTTAGAGCAAAA 59.962 37.500 0.00 0.00 0.00 2.44
336 337 4.984161 GCAGCACAAATCTTAGAGCAAAAA 59.016 37.500 0.00 0.00 0.00 1.94
337 338 5.636543 GCAGCACAAATCTTAGAGCAAAAAT 59.363 36.000 0.00 0.00 0.00 1.82
338 339 6.146673 GCAGCACAAATCTTAGAGCAAAAATT 59.853 34.615 0.00 0.00 0.00 1.82
339 340 7.507304 CAGCACAAATCTTAGAGCAAAAATTG 58.493 34.615 0.00 0.00 0.00 2.32
340 341 6.647895 AGCACAAATCTTAGAGCAAAAATTGG 59.352 34.615 0.00 0.00 0.00 3.16
341 342 6.646240 GCACAAATCTTAGAGCAAAAATTGGA 59.354 34.615 0.00 0.00 0.00 3.53
342 343 7.332678 GCACAAATCTTAGAGCAAAAATTGGAT 59.667 33.333 0.00 0.00 0.00 3.41
343 344 8.653338 CACAAATCTTAGAGCAAAAATTGGATG 58.347 33.333 0.00 0.00 0.00 3.51
344 345 7.820872 ACAAATCTTAGAGCAAAAATTGGATGG 59.179 33.333 0.00 0.00 0.00 3.51
345 346 5.329035 TCTTAGAGCAAAAATTGGATGGC 57.671 39.130 0.00 0.00 0.00 4.40
346 347 4.160252 TCTTAGAGCAAAAATTGGATGGCC 59.840 41.667 0.00 0.00 0.00 5.36
347 348 2.259012 AGAGCAAAAATTGGATGGCCA 58.741 42.857 8.56 8.56 44.17 5.36
348 349 2.235402 AGAGCAAAAATTGGATGGCCAG 59.765 45.455 13.05 0.00 46.91 4.85
349 350 2.234414 GAGCAAAAATTGGATGGCCAGA 59.766 45.455 13.05 0.00 46.91 3.86
350 351 2.638855 AGCAAAAATTGGATGGCCAGAA 59.361 40.909 13.05 4.12 46.91 3.02
351 352 3.072768 AGCAAAAATTGGATGGCCAGAAA 59.927 39.130 13.05 5.72 46.91 2.52
352 353 3.819902 GCAAAAATTGGATGGCCAGAAAA 59.180 39.130 13.05 5.31 46.91 2.29
353 354 4.460034 GCAAAAATTGGATGGCCAGAAAAT 59.540 37.500 13.05 7.68 46.91 1.82
354 355 5.647225 GCAAAAATTGGATGGCCAGAAAATA 59.353 36.000 13.05 0.00 46.91 1.40
355 356 6.183360 GCAAAAATTGGATGGCCAGAAAATAG 60.183 38.462 13.05 3.61 46.91 1.73
356 357 6.872585 AAAATTGGATGGCCAGAAAATAGA 57.127 33.333 13.05 0.00 46.91 1.98
357 358 5.859205 AATTGGATGGCCAGAAAATAGAC 57.141 39.130 13.05 0.00 46.91 2.59
358 359 4.591321 TTGGATGGCCAGAAAATAGACT 57.409 40.909 13.05 0.00 46.91 3.24
359 360 3.889815 TGGATGGCCAGAAAATAGACTG 58.110 45.455 13.05 0.00 39.92 3.51
360 361 3.523157 TGGATGGCCAGAAAATAGACTGA 59.477 43.478 13.05 0.00 39.92 3.41
361 362 3.879892 GGATGGCCAGAAAATAGACTGAC 59.120 47.826 13.05 0.00 36.38 3.51
362 363 3.350219 TGGCCAGAAAATAGACTGACC 57.650 47.619 0.00 0.00 37.22 4.02
363 364 2.026262 TGGCCAGAAAATAGACTGACCC 60.026 50.000 0.00 0.00 36.16 4.46
364 365 2.026262 GGCCAGAAAATAGACTGACCCA 60.026 50.000 0.00 0.00 36.38 4.51
365 366 3.561313 GGCCAGAAAATAGACTGACCCAA 60.561 47.826 0.00 0.00 36.38 4.12
366 367 4.079253 GCCAGAAAATAGACTGACCCAAA 58.921 43.478 0.00 0.00 36.38 3.28
367 368 4.706962 GCCAGAAAATAGACTGACCCAAAT 59.293 41.667 0.00 0.00 36.38 2.32
368 369 5.185828 GCCAGAAAATAGACTGACCCAAATT 59.814 40.000 0.00 0.00 36.38 1.82
369 370 6.625960 GCCAGAAAATAGACTGACCCAAATTC 60.626 42.308 0.00 0.00 36.38 2.17
370 371 6.434028 CCAGAAAATAGACTGACCCAAATTCA 59.566 38.462 0.00 0.00 36.38 2.57
371 372 7.039784 CCAGAAAATAGACTGACCCAAATTCAA 60.040 37.037 0.00 0.00 36.38 2.69
372 373 8.359642 CAGAAAATAGACTGACCCAAATTCAAA 58.640 33.333 0.00 0.00 36.38 2.69
373 374 8.923270 AGAAAATAGACTGACCCAAATTCAAAA 58.077 29.630 0.00 0.00 0.00 2.44
374 375 8.887036 AAAATAGACTGACCCAAATTCAAAAC 57.113 30.769 0.00 0.00 0.00 2.43
375 376 7.839680 AATAGACTGACCCAAATTCAAAACT 57.160 32.000 0.00 0.00 0.00 2.66
376 377 5.774498 AGACTGACCCAAATTCAAAACTC 57.226 39.130 0.00 0.00 0.00 3.01
377 378 5.200483 AGACTGACCCAAATTCAAAACTCA 58.800 37.500 0.00 0.00 0.00 3.41
378 379 5.300286 AGACTGACCCAAATTCAAAACTCAG 59.700 40.000 0.00 0.00 0.00 3.35
379 380 4.342092 ACTGACCCAAATTCAAAACTCAGG 59.658 41.667 0.00 0.00 0.00 3.86
380 381 3.069443 TGACCCAAATTCAAAACTCAGGC 59.931 43.478 0.00 0.00 0.00 4.85
381 382 3.037549 ACCCAAATTCAAAACTCAGGCA 58.962 40.909 0.00 0.00 0.00 4.75
382 383 3.454082 ACCCAAATTCAAAACTCAGGCAA 59.546 39.130 0.00 0.00 0.00 4.52
383 384 3.809279 CCCAAATTCAAAACTCAGGCAAC 59.191 43.478 0.00 0.00 0.00 4.17
401 402 5.928153 GGCAACTTACAAGTAGCTAAAGTG 58.072 41.667 8.22 3.82 38.57 3.16
402 403 5.106673 GGCAACTTACAAGTAGCTAAAGTGG 60.107 44.000 8.22 6.85 38.57 4.00
426 427 3.084039 TCTCAAACCATGGTGAATGCTC 58.916 45.455 20.60 0.00 34.67 4.26
428 429 1.894466 CAAACCATGGTGAATGCTCCA 59.106 47.619 20.60 0.00 41.50 3.86
429 430 2.299582 CAAACCATGGTGAATGCTCCAA 59.700 45.455 20.60 0.00 40.72 3.53
435 436 3.448093 TGGTGAATGCTCCAATAACCA 57.552 42.857 0.00 0.00 34.90 3.67
471 472 5.503662 ACGGTTTCAAAAACCTTACGATT 57.496 34.783 17.06 0.00 38.15 3.34
485 487 0.180406 ACGATTACATGTGAGGCCCC 59.820 55.000 9.11 0.00 0.00 5.80
487 489 1.408127 CGATTACATGTGAGGCCCCAA 60.408 52.381 9.11 0.00 0.00 4.12
509 511 2.135933 GCGGTAGACTGTATCCAATGC 58.864 52.381 0.00 0.00 0.00 3.56
510 512 2.483013 GCGGTAGACTGTATCCAATGCA 60.483 50.000 0.00 0.00 0.00 3.96
511 513 3.792401 CGGTAGACTGTATCCAATGCAA 58.208 45.455 0.00 0.00 0.00 4.08
573 575 0.108138 CCGAGTCCAGTGGTTGATCC 60.108 60.000 9.54 0.00 0.00 3.36
584 586 2.124983 TTGATCCTCCTGCAGCGC 60.125 61.111 8.66 0.00 0.00 5.92
612 806 4.631131 TGCATATCATGTACTCCTTTCCG 58.369 43.478 0.00 0.00 0.00 4.30
750 944 1.135083 AGTAGAAACGGATGTCCAGCG 60.135 52.381 0.00 0.00 35.14 5.18
903 1101 1.372499 CCCGCGTGAAGAAGACGAA 60.372 57.895 4.92 0.00 39.21 3.85
959 1157 2.280797 TCTGGCTGTTGGTGACGC 60.281 61.111 0.00 0.00 0.00 5.19
1223 1435 1.856802 TGCAGATTCATCCATCGACG 58.143 50.000 0.00 0.00 0.00 5.12
1224 1436 0.510359 GCAGATTCATCCATCGACGC 59.490 55.000 0.00 0.00 0.00 5.19
1225 1437 1.143305 CAGATTCATCCATCGACGCC 58.857 55.000 0.00 0.00 0.00 5.68
1226 1438 0.752658 AGATTCATCCATCGACGCCA 59.247 50.000 0.00 0.00 0.00 5.69
1227 1439 1.345741 AGATTCATCCATCGACGCCAT 59.654 47.619 0.00 0.00 0.00 4.40
1228 1440 2.146342 GATTCATCCATCGACGCCATT 58.854 47.619 0.00 0.00 0.00 3.16
1229 1441 2.036958 TTCATCCATCGACGCCATTT 57.963 45.000 0.00 0.00 0.00 2.32
1230 1442 1.581934 TCATCCATCGACGCCATTTC 58.418 50.000 0.00 0.00 0.00 2.17
1231 1443 1.138859 TCATCCATCGACGCCATTTCT 59.861 47.619 0.00 0.00 0.00 2.52
1232 1444 1.262417 CATCCATCGACGCCATTTCTG 59.738 52.381 0.00 0.00 0.00 3.02
1233 1445 0.461870 TCCATCGACGCCATTTCTGG 60.462 55.000 0.00 0.00 46.17 3.86
1234 1446 0.744414 CCATCGACGCCATTTCTGGT 60.744 55.000 0.00 0.00 45.10 4.00
1235 1447 0.652592 CATCGACGCCATTTCTGGTC 59.347 55.000 0.00 0.00 45.10 4.02
1236 1448 0.537188 ATCGACGCCATTTCTGGTCT 59.463 50.000 0.00 0.00 45.10 3.85
1237 1449 0.320374 TCGACGCCATTTCTGGTCTT 59.680 50.000 0.00 0.00 45.10 3.01
1238 1450 1.156736 CGACGCCATTTCTGGTCTTT 58.843 50.000 0.00 0.00 45.10 2.52
1239 1451 1.535462 CGACGCCATTTCTGGTCTTTT 59.465 47.619 0.00 0.00 45.10 2.27
1240 1452 2.031157 CGACGCCATTTCTGGTCTTTTT 60.031 45.455 0.00 0.00 45.10 1.94
1264 1476 4.529716 TTTGAAATGGAGGTATACCCCC 57.470 45.455 18.65 17.04 36.42 5.40
1265 1477 2.051692 TGAAATGGAGGTATACCCCCG 58.948 52.381 18.65 0.00 36.42 5.73
1266 1478 1.350019 GAAATGGAGGTATACCCCCGG 59.650 57.143 18.65 0.00 36.42 5.73
1267 1479 1.131928 AATGGAGGTATACCCCCGGC 61.132 60.000 18.65 3.34 36.42 6.13
1268 1480 2.926779 GGAGGTATACCCCCGGCC 60.927 72.222 18.65 8.67 36.42 6.13
1269 1481 2.203466 GAGGTATACCCCCGGCCT 59.797 66.667 18.65 0.00 36.42 5.19
1270 1482 1.912264 GAGGTATACCCCCGGCCTC 60.912 68.421 18.65 6.31 38.89 4.70
1271 1483 2.203466 GGTATACCCCCGGCCTCT 59.797 66.667 11.17 0.00 0.00 3.69
1272 1484 2.214920 GGTATACCCCCGGCCTCTG 61.215 68.421 11.17 0.00 0.00 3.35
1273 1485 2.525877 TATACCCCCGGCCTCTGC 60.526 66.667 0.00 0.00 0.00 4.26
1274 1486 3.398365 TATACCCCCGGCCTCTGCA 62.398 63.158 0.00 0.00 40.13 4.41
1275 1487 2.689573 TATACCCCCGGCCTCTGCAT 62.690 60.000 0.00 0.00 40.13 3.96
1278 1490 3.882326 CCCCGGCCTCTGCATCAT 61.882 66.667 0.00 0.00 40.13 2.45
1279 1491 2.519622 CCCCGGCCTCTGCATCATA 61.520 63.158 0.00 0.00 40.13 2.15
1280 1492 1.451504 CCCGGCCTCTGCATCATAA 59.548 57.895 0.00 0.00 40.13 1.90
1281 1493 0.037303 CCCGGCCTCTGCATCATAAT 59.963 55.000 0.00 0.00 40.13 1.28
1282 1494 1.162698 CCGGCCTCTGCATCATAATG 58.837 55.000 0.00 0.00 40.13 1.90
1283 1495 1.271001 CCGGCCTCTGCATCATAATGA 60.271 52.381 0.00 0.00 40.13 2.57
1284 1496 2.617276 CCGGCCTCTGCATCATAATGAT 60.617 50.000 0.00 0.00 37.65 2.45
1574 2115 1.553704 ACGACCATGGAGAAGGTAACC 59.446 52.381 21.47 0.00 38.50 2.85
1592 2133 2.758327 ACCGCCGCTACTGGATCA 60.758 61.111 0.00 0.00 0.00 2.92
1617 2158 3.473625 CCCTTCCCATTACATTACGGTC 58.526 50.000 0.00 0.00 0.00 4.79
1635 2176 1.535462 GTCACCTTTGGTTGACGGATG 59.465 52.381 0.00 0.00 31.02 3.51
1654 2195 2.002586 TGCTGCTGCGTTTATCTCTTC 58.997 47.619 11.21 0.00 43.34 2.87
1691 2319 9.907229 TCTAATCATATGTGTAGATCCGAGTAT 57.093 33.333 1.90 0.00 0.00 2.12
1730 2358 8.759481 TCCTGGTATCATATTTTGCATGTAAA 57.241 30.769 4.71 4.71 0.00 2.01
1763 2391 5.006068 CGCCTTTTCGGAATACCTAAAGTAC 59.994 44.000 0.00 0.00 35.57 2.73
1764 2392 6.111382 GCCTTTTCGGAATACCTAAAGTACT 58.889 40.000 0.00 0.00 35.57 2.73
1765 2393 6.036844 GCCTTTTCGGAATACCTAAAGTACTG 59.963 42.308 0.00 0.00 35.57 2.74
1766 2394 7.101700 CCTTTTCGGAATACCTAAAGTACTGT 58.898 38.462 0.00 0.00 35.57 3.55
1767 2395 8.253113 CCTTTTCGGAATACCTAAAGTACTGTA 58.747 37.037 0.00 0.00 35.57 2.74
1784 2412 9.581289 AAGTACTGTAGTAGATTAGCATCATCT 57.419 33.333 0.00 0.00 35.13 2.90
1785 2413 9.226606 AGTACTGTAGTAGATTAGCATCATCTC 57.773 37.037 0.00 0.00 32.94 2.75
1786 2414 7.139896 ACTGTAGTAGATTAGCATCATCTCG 57.860 40.000 0.00 0.00 32.94 4.04
1789 2417 3.829026 AGTAGATTAGCATCATCTCGGCA 59.171 43.478 0.00 0.00 32.94 5.69
1790 2418 3.316071 AGATTAGCATCATCTCGGCAG 57.684 47.619 0.00 0.00 0.00 4.85
1791 2419 1.731160 GATTAGCATCATCTCGGCAGC 59.269 52.381 0.00 0.00 0.00 5.25
1885 2520 4.153296 CCGGTTCCATTTTGCATTAAAACC 59.847 41.667 0.00 0.00 40.80 3.27
1918 2553 4.755629 GTCCTACTCCAGTTCCAAAAAGTC 59.244 45.833 0.00 0.00 0.00 3.01
1963 2598 4.258543 AGGCAGATTTTGATGCAATTTGG 58.741 39.130 0.00 0.00 44.37 3.28
1981 2616 6.645790 ATTTGGATGTTCTGATCTATTGCC 57.354 37.500 0.00 0.00 0.00 4.52
2038 2674 7.277981 AGTTGATCGTGAATGTAACAGAATACC 59.722 37.037 0.00 0.00 0.00 2.73
2039 2675 6.635755 TGATCGTGAATGTAACAGAATACCA 58.364 36.000 0.00 0.00 0.00 3.25
2044 2680 8.788806 TCGTGAATGTAACAGAATACCATTTTT 58.211 29.630 0.00 0.00 0.00 1.94
2076 2712 9.701355 AAATTTTAAGATTCGTGCAAAACTTTG 57.299 25.926 0.00 0.00 41.03 2.77
2082 2718 2.645802 TCGTGCAAAACTTTGTAGGGT 58.354 42.857 11.35 0.00 38.56 4.34
2194 2834 2.030371 CCCTAAGAACGTACTCCCTCC 58.970 57.143 0.00 0.00 0.00 4.30
2197 2837 1.625511 AAGAACGTACTCCCTCCGTT 58.374 50.000 0.00 0.00 46.38 4.44
2199 2839 2.270959 AACGTACTCCCTCCGTTCC 58.729 57.895 0.00 0.00 40.46 3.62
2200 2840 0.540365 AACGTACTCCCTCCGTTCCA 60.540 55.000 0.00 0.00 40.46 3.53
2201 2841 1.246737 ACGTACTCCCTCCGTTCCAC 61.247 60.000 0.00 0.00 0.00 4.02
2206 2846 1.553704 ACTCCCTCCGTTCCACAATAC 59.446 52.381 0.00 0.00 0.00 1.89
2208 2848 2.170607 CTCCCTCCGTTCCACAATACAT 59.829 50.000 0.00 0.00 0.00 2.29
2210 2850 1.670811 CCTCCGTTCCACAATACATGC 59.329 52.381 0.00 0.00 0.00 4.06
2211 2851 1.670811 CTCCGTTCCACAATACATGCC 59.329 52.381 0.00 0.00 0.00 4.40
2212 2852 1.280710 TCCGTTCCACAATACATGCCT 59.719 47.619 0.00 0.00 0.00 4.75
2213 2853 2.091541 CCGTTCCACAATACATGCCTT 58.908 47.619 0.00 0.00 0.00 4.35
2215 2855 3.427503 CCGTTCCACAATACATGCCTTTC 60.428 47.826 0.00 0.00 0.00 2.62
2216 2856 3.190327 CGTTCCACAATACATGCCTTTCA 59.810 43.478 0.00 0.00 0.00 2.69
2217 2857 4.142403 CGTTCCACAATACATGCCTTTCAT 60.142 41.667 0.00 0.00 35.31 2.57
2218 2858 5.622007 CGTTCCACAATACATGCCTTTCATT 60.622 40.000 0.00 0.00 31.79 2.57
2219 2859 5.999205 TCCACAATACATGCCTTTCATTT 57.001 34.783 0.00 0.00 31.79 2.32
2220 2860 5.722263 TCCACAATACATGCCTTTCATTTG 58.278 37.500 0.00 0.00 31.79 2.32
2221 2861 5.245751 TCCACAATACATGCCTTTCATTTGT 59.754 36.000 0.00 0.00 35.27 2.83
2222 2862 5.577945 CCACAATACATGCCTTTCATTTGTC 59.422 40.000 0.00 0.00 33.62 3.18
2223 2863 6.157904 CACAATACATGCCTTTCATTTGTCA 58.842 36.000 0.00 0.00 33.62 3.58
2224 2864 6.645827 CACAATACATGCCTTTCATTTGTCAA 59.354 34.615 0.00 0.00 33.62 3.18
2226 2866 7.714377 ACAATACATGCCTTTCATTTGTCAAAA 59.286 29.630 1.31 0.00 31.48 2.44
2247 2887 9.481340 TCAAAATGTAGATGTATCTAGACATGC 57.519 33.333 9.77 0.00 40.18 4.06
2253 2893 9.355916 TGTAGATGTATCTAGACATGCTTTAGT 57.644 33.333 0.00 0.00 40.18 2.24
2267 2907 9.804758 GACATGCTTTAGTATATAGGTACATCC 57.195 37.037 0.00 0.00 0.00 3.51
2268 2908 9.321532 ACATGCTTTAGTATATAGGTACATCCA 57.678 33.333 0.00 0.00 39.02 3.41
2282 2922 9.874205 ATAGGTACATCCATTTTTGAACAAATG 57.126 29.630 0.00 0.04 41.86 2.32
2283 2923 7.961351 AGGTACATCCATTTTTGAACAAATGA 58.039 30.769 7.56 0.00 43.99 2.57
2284 2924 8.428063 AGGTACATCCATTTTTGAACAAATGAA 58.572 29.630 7.56 0.00 43.99 2.57
2285 2925 9.050601 GGTACATCCATTTTTGAACAAATGAAA 57.949 29.630 7.56 0.00 43.99 2.69
2287 2927 8.735692 ACATCCATTTTTGAACAAATGAAAGT 57.264 26.923 7.56 1.35 43.99 2.66
2288 2928 8.829612 ACATCCATTTTTGAACAAATGAAAGTC 58.170 29.630 7.56 0.00 43.99 3.01
2289 2929 8.828644 CATCCATTTTTGAACAAATGAAAGTCA 58.171 29.630 7.56 0.00 43.99 3.41
2290 2930 8.783833 TCCATTTTTGAACAAATGAAAGTCAA 57.216 26.923 7.56 0.00 43.99 3.18
2291 2931 8.881743 TCCATTTTTGAACAAATGAAAGTCAAG 58.118 29.630 7.56 0.00 43.99 3.02
2292 2932 8.667463 CCATTTTTGAACAAATGAAAGTCAAGT 58.333 29.630 7.56 0.00 43.99 3.16
2306 2946 9.956720 ATGAAAGTCAAGTATTTTGAAACAGAG 57.043 29.630 0.00 0.00 0.00 3.35
2307 2947 8.405531 TGAAAGTCAAGTATTTTGAAACAGAGG 58.594 33.333 0.00 0.00 0.00 3.69
2308 2948 6.884280 AGTCAAGTATTTTGAAACAGAGGG 57.116 37.500 0.00 0.00 0.00 4.30
2309 2949 6.601332 AGTCAAGTATTTTGAAACAGAGGGA 58.399 36.000 0.00 0.00 0.00 4.20
2310 2950 6.712547 AGTCAAGTATTTTGAAACAGAGGGAG 59.287 38.462 0.00 0.00 0.00 4.30
2311 2951 6.486993 GTCAAGTATTTTGAAACAGAGGGAGT 59.513 38.462 0.00 0.00 0.00 3.85
2329 2969 4.571176 GGGAGTACTTGATTGTTCGGATTC 59.429 45.833 0.00 0.00 0.00 2.52
2336 2976 7.553881 ACTTGATTGTTCGGATTCGATATTT 57.446 32.000 0.00 0.00 45.51 1.40
2546 3190 2.171341 AGAAGAAGAAACTGCCGTCC 57.829 50.000 0.00 0.00 0.00 4.79
2765 3409 6.257193 GTCCTGACGTTTCTGTTTCTTTCTAA 59.743 38.462 0.00 0.00 0.00 2.10
2766 3410 6.819649 TCCTGACGTTTCTGTTTCTTTCTAAA 59.180 34.615 0.00 0.00 0.00 1.85
2881 3529 2.415512 GCAGTTCTACTTTACAAGGCCG 59.584 50.000 0.00 0.00 0.00 6.13
3112 3763 2.538449 GTCGCCACTCCACATAATAACG 59.462 50.000 0.00 0.00 0.00 3.18
3186 3837 2.018542 TGCATAACGGGTTAGCACTC 57.981 50.000 9.88 0.00 30.29 3.51
3199 3851 6.403878 GGGTTAGCACTCACTTCTTATGTTA 58.596 40.000 0.00 0.00 0.00 2.41
3984 4688 4.048504 CGTGCATCGTGATAACTTATGGA 58.951 43.478 0.00 0.00 34.52 3.41
4110 4814 3.489355 TGCAACTGACCATGTGAGATTT 58.511 40.909 0.00 0.00 0.00 2.17
4197 4902 7.823149 AGAAAATAGTAACATACGAAACGCT 57.177 32.000 0.00 0.00 0.00 5.07
4232 4937 6.430451 GTTGGTACTTGCACAATATGATAGC 58.570 40.000 0.00 0.00 0.00 2.97
4518 5241 2.951229 ACAAGGTCTTACAAGGTGGG 57.049 50.000 0.00 0.00 0.00 4.61
4566 5289 6.761731 TTTTTCCTTGCAATTACAATGTCG 57.238 33.333 0.00 0.00 0.00 4.35
4599 5322 4.271291 GGGAGACGCAAGAAGAATGAATAC 59.729 45.833 0.00 0.00 43.62 1.89
4632 5355 1.531602 GGTGGGCAAGCAGGAGTTT 60.532 57.895 0.00 0.00 0.00 2.66
4906 5629 5.355910 CACAACATGGATGATGATGACTTCA 59.644 40.000 7.66 0.00 37.08 3.02
5065 5788 6.897259 TCAAGCGCTTCGTTATTAATAACT 57.103 33.333 27.48 11.04 40.27 2.24
5390 6113 6.803320 ACTGCGAAATCATTGTCTGTTTAATG 59.197 34.615 0.00 0.00 36.00 1.90
5412 6135 6.408107 TGCCAATTATACATGCATGAATGT 57.592 33.333 32.75 22.94 43.21 2.71
5428 6151 7.441458 TGCATGAATGTCAATTTTCAAATGTCA 59.559 29.630 0.00 0.00 35.63 3.58
5491 6214 5.061853 CCATCAGAGTAGCATGCAGTTAAT 58.938 41.667 21.98 2.35 0.00 1.40
5651 6374 9.683069 GTTTGATTAGTGTTTTGATCAGAATGT 57.317 29.630 1.53 0.00 37.40 2.71
5801 6524 7.339721 TGTTTACCAGGACAGTTTTATTTCACA 59.660 33.333 0.00 0.00 0.00 3.58
5815 6538 6.857777 TTATTTCACAGCCAACAATTTTGG 57.142 33.333 12.43 12.43 42.37 3.28
5886 6609 8.368668 GGGTATACTGCTCTTAACATACAGAAT 58.631 37.037 2.25 0.00 32.67 2.40
5887 6610 9.413048 GGTATACTGCTCTTAACATACAGAATC 57.587 37.037 2.25 0.00 32.67 2.52
5902 6626 9.053840 ACATACAGAATCAATAGAAGCAATCTG 57.946 33.333 2.55 0.00 39.30 2.90
5944 6668 4.920376 ACAAAACGATTGTGTTTCTGGAG 58.080 39.130 9.86 0.00 41.01 3.86
5946 6670 5.587043 ACAAAACGATTGTGTTTCTGGAGTA 59.413 36.000 9.86 0.00 41.01 2.59
5947 6671 6.094325 ACAAAACGATTGTGTTTCTGGAGTAA 59.906 34.615 9.86 0.00 41.01 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 2.094752 AGCGAAGTTGTGTGCAGTTTTT 60.095 40.909 0.00 0.00 0.00 1.94
8 9 1.472480 AGCGAAGTTGTGTGCAGTTTT 59.528 42.857 0.00 0.00 0.00 2.43
9 10 1.064060 GAGCGAAGTTGTGTGCAGTTT 59.936 47.619 0.00 0.00 0.00 2.66
10 11 0.657840 GAGCGAAGTTGTGTGCAGTT 59.342 50.000 0.00 0.00 0.00 3.16
11 12 0.179073 AGAGCGAAGTTGTGTGCAGT 60.179 50.000 0.00 0.00 0.00 4.40
12 13 1.783284 TAGAGCGAAGTTGTGTGCAG 58.217 50.000 0.00 0.00 0.00 4.41
13 14 2.232756 TTAGAGCGAAGTTGTGTGCA 57.767 45.000 0.00 0.00 0.00 4.57
14 15 3.602390 TTTTAGAGCGAAGTTGTGTGC 57.398 42.857 0.00 0.00 0.00 4.57
15 16 4.379793 GCAATTTTAGAGCGAAGTTGTGTG 59.620 41.667 0.00 0.00 0.00 3.82
16 17 4.036262 TGCAATTTTAGAGCGAAGTTGTGT 59.964 37.500 0.00 0.00 0.00 3.72
17 18 4.379793 GTGCAATTTTAGAGCGAAGTTGTG 59.620 41.667 0.00 0.00 0.00 3.33
18 19 4.275936 AGTGCAATTTTAGAGCGAAGTTGT 59.724 37.500 0.00 0.00 0.00 3.32
19 20 4.787598 AGTGCAATTTTAGAGCGAAGTTG 58.212 39.130 0.00 0.00 0.00 3.16
20 21 5.438761 AAGTGCAATTTTAGAGCGAAGTT 57.561 34.783 0.00 0.00 0.00 2.66
21 22 5.438761 AAAGTGCAATTTTAGAGCGAAGT 57.561 34.783 6.26 0.00 0.00 3.01
22 23 6.575132 CAAAAAGTGCAATTTTAGAGCGAAG 58.425 36.000 23.56 4.91 32.20 3.79
23 24 6.509317 CAAAAAGTGCAATTTTAGAGCGAA 57.491 33.333 23.56 0.00 32.20 4.70
74 75 9.840427 ACTATGCAATAAGTGTGAAAATTACAC 57.160 29.630 0.00 2.33 46.67 2.90
82 83 9.394767 ACATGAATACTATGCAATAAGTGTGAA 57.605 29.630 0.00 0.00 0.00 3.18
83 84 8.829612 CACATGAATACTATGCAATAAGTGTGA 58.170 33.333 0.00 0.00 0.00 3.58
84 85 8.615211 ACACATGAATACTATGCAATAAGTGTG 58.385 33.333 0.00 6.30 33.32 3.82
85 86 8.737168 ACACATGAATACTATGCAATAAGTGT 57.263 30.769 0.00 0.00 0.00 3.55
103 104 9.956640 TGGATGCATATAAATGTATACACATGA 57.043 29.630 7.96 0.00 42.24 3.07
106 107 9.566432 TGTTGGATGCATATAAATGTATACACA 57.434 29.630 7.96 0.00 45.47 3.72
113 114 8.916062 TCTTTCATGTTGGATGCATATAAATGT 58.084 29.630 0.00 0.00 35.38 2.71
114 115 9.752961 TTCTTTCATGTTGGATGCATATAAATG 57.247 29.630 0.00 0.87 36.09 2.32
118 119 9.806203 CTTTTTCTTTCATGTTGGATGCATATA 57.194 29.630 0.00 0.00 0.00 0.86
119 120 8.533657 TCTTTTTCTTTCATGTTGGATGCATAT 58.466 29.630 0.00 0.00 0.00 1.78
120 121 7.894708 TCTTTTTCTTTCATGTTGGATGCATA 58.105 30.769 0.00 0.00 0.00 3.14
121 122 6.761312 TCTTTTTCTTTCATGTTGGATGCAT 58.239 32.000 0.00 0.00 0.00 3.96
122 123 6.159299 TCTTTTTCTTTCATGTTGGATGCA 57.841 33.333 0.00 0.00 0.00 3.96
123 124 7.481275 TTTCTTTTTCTTTCATGTTGGATGC 57.519 32.000 0.00 0.00 0.00 3.91
124 125 9.706846 GTTTTTCTTTTTCTTTCATGTTGGATG 57.293 29.630 0.00 0.00 0.00 3.51
125 126 8.892723 GGTTTTTCTTTTTCTTTCATGTTGGAT 58.107 29.630 0.00 0.00 0.00 3.41
126 127 7.880195 TGGTTTTTCTTTTTCTTTCATGTTGGA 59.120 29.630 0.00 0.00 0.00 3.53
127 128 8.038492 TGGTTTTTCTTTTTCTTTCATGTTGG 57.962 30.769 0.00 0.00 0.00 3.77
128 129 9.328721 GTTGGTTTTTCTTTTTCTTTCATGTTG 57.671 29.630 0.00 0.00 0.00 3.33
129 130 9.283768 AGTTGGTTTTTCTTTTTCTTTCATGTT 57.716 25.926 0.00 0.00 0.00 2.71
130 131 8.846943 AGTTGGTTTTTCTTTTTCTTTCATGT 57.153 26.923 0.00 0.00 0.00 3.21
133 134 9.765795 TGTTAGTTGGTTTTTCTTTTTCTTTCA 57.234 25.926 0.00 0.00 0.00 2.69
173 174 7.284351 TCTGTTTTTACGTGTTTTTGCTTTTG 58.716 30.769 0.00 0.00 0.00 2.44
174 175 7.409465 TCTGTTTTTACGTGTTTTTGCTTTT 57.591 28.000 0.00 0.00 0.00 2.27
175 176 7.409465 TTCTGTTTTTACGTGTTTTTGCTTT 57.591 28.000 0.00 0.00 0.00 3.51
176 177 7.409465 TTTCTGTTTTTACGTGTTTTTGCTT 57.591 28.000 0.00 0.00 0.00 3.91
177 178 7.382759 TCTTTTCTGTTTTTACGTGTTTTTGCT 59.617 29.630 0.00 0.00 0.00 3.91
178 179 7.503165 TCTTTTCTGTTTTTACGTGTTTTTGC 58.497 30.769 0.00 0.00 0.00 3.68
179 180 9.851043 TTTCTTTTCTGTTTTTACGTGTTTTTG 57.149 25.926 0.00 0.00 0.00 2.44
180 181 9.852481 GTTTCTTTTCTGTTTTTACGTGTTTTT 57.148 25.926 0.00 0.00 0.00 1.94
181 182 9.032420 TGTTTCTTTTCTGTTTTTACGTGTTTT 57.968 25.926 0.00 0.00 0.00 2.43
182 183 8.576936 TGTTTCTTTTCTGTTTTTACGTGTTT 57.423 26.923 0.00 0.00 0.00 2.83
183 184 8.576936 TTGTTTCTTTTCTGTTTTTACGTGTT 57.423 26.923 0.00 0.00 0.00 3.32
184 185 8.576936 TTTGTTTCTTTTCTGTTTTTACGTGT 57.423 26.923 0.00 0.00 0.00 4.49
185 186 8.159709 CCTTTGTTTCTTTTCTGTTTTTACGTG 58.840 33.333 0.00 0.00 0.00 4.49
186 187 7.329962 CCCTTTGTTTCTTTTCTGTTTTTACGT 59.670 33.333 0.00 0.00 0.00 3.57
187 188 7.542824 TCCCTTTGTTTCTTTTCTGTTTTTACG 59.457 33.333 0.00 0.00 0.00 3.18
188 189 8.766000 TCCCTTTGTTTCTTTTCTGTTTTTAC 57.234 30.769 0.00 0.00 0.00 2.01
190 191 9.599866 CTATCCCTTTGTTTCTTTTCTGTTTTT 57.400 29.630 0.00 0.00 0.00 1.94
191 192 8.977412 TCTATCCCTTTGTTTCTTTTCTGTTTT 58.023 29.630 0.00 0.00 0.00 2.43
192 193 8.533569 TCTATCCCTTTGTTTCTTTTCTGTTT 57.466 30.769 0.00 0.00 0.00 2.83
193 194 7.231519 CCTCTATCCCTTTGTTTCTTTTCTGTT 59.768 37.037 0.00 0.00 0.00 3.16
194 195 6.717084 CCTCTATCCCTTTGTTTCTTTTCTGT 59.283 38.462 0.00 0.00 0.00 3.41
195 196 6.942576 TCCTCTATCCCTTTGTTTCTTTTCTG 59.057 38.462 0.00 0.00 0.00 3.02
196 197 7.091533 TCCTCTATCCCTTTGTTTCTTTTCT 57.908 36.000 0.00 0.00 0.00 2.52
197 198 6.375736 CCTCCTCTATCCCTTTGTTTCTTTTC 59.624 42.308 0.00 0.00 0.00 2.29
198 199 6.249192 CCTCCTCTATCCCTTTGTTTCTTTT 58.751 40.000 0.00 0.00 0.00 2.27
199 200 5.281245 CCCTCCTCTATCCCTTTGTTTCTTT 60.281 44.000 0.00 0.00 0.00 2.52
200 201 4.228438 CCCTCCTCTATCCCTTTGTTTCTT 59.772 45.833 0.00 0.00 0.00 2.52
201 202 3.783082 CCCTCCTCTATCCCTTTGTTTCT 59.217 47.826 0.00 0.00 0.00 2.52
202 203 3.685835 GCCCTCCTCTATCCCTTTGTTTC 60.686 52.174 0.00 0.00 0.00 2.78
203 204 2.242452 GCCCTCCTCTATCCCTTTGTTT 59.758 50.000 0.00 0.00 0.00 2.83
204 205 1.847088 GCCCTCCTCTATCCCTTTGTT 59.153 52.381 0.00 0.00 0.00 2.83
205 206 1.010170 AGCCCTCCTCTATCCCTTTGT 59.990 52.381 0.00 0.00 0.00 2.83
206 207 1.419387 CAGCCCTCCTCTATCCCTTTG 59.581 57.143 0.00 0.00 0.00 2.77
207 208 1.697291 CCAGCCCTCCTCTATCCCTTT 60.697 57.143 0.00 0.00 0.00 3.11
208 209 0.104725 CCAGCCCTCCTCTATCCCTT 60.105 60.000 0.00 0.00 0.00 3.95
209 210 1.007238 TCCAGCCCTCCTCTATCCCT 61.007 60.000 0.00 0.00 0.00 4.20
210 211 0.118144 ATCCAGCCCTCCTCTATCCC 59.882 60.000 0.00 0.00 0.00 3.85
211 212 1.567357 GATCCAGCCCTCCTCTATCC 58.433 60.000 0.00 0.00 0.00 2.59
212 213 1.181786 CGATCCAGCCCTCCTCTATC 58.818 60.000 0.00 0.00 0.00 2.08
213 214 0.902516 GCGATCCAGCCCTCCTCTAT 60.903 60.000 0.00 0.00 0.00 1.98
214 215 1.531840 GCGATCCAGCCCTCCTCTA 60.532 63.158 0.00 0.00 0.00 2.43
215 216 2.841988 GCGATCCAGCCCTCCTCT 60.842 66.667 0.00 0.00 0.00 3.69
216 217 2.515071 ATGCGATCCAGCCCTCCTC 61.515 63.158 0.00 0.00 36.02 3.71
217 218 2.447379 ATGCGATCCAGCCCTCCT 60.447 61.111 0.00 0.00 36.02 3.69
218 219 2.281345 CATGCGATCCAGCCCTCC 60.281 66.667 0.00 0.00 36.02 4.30
219 220 2.281345 CCATGCGATCCAGCCCTC 60.281 66.667 0.00 0.00 36.02 4.30
220 221 1.344953 TAACCATGCGATCCAGCCCT 61.345 55.000 0.00 0.00 36.02 5.19
221 222 0.465460 TTAACCATGCGATCCAGCCC 60.465 55.000 0.00 0.00 36.02 5.19
222 223 1.267806 CATTAACCATGCGATCCAGCC 59.732 52.381 0.00 0.00 36.02 4.85
223 224 1.267806 CCATTAACCATGCGATCCAGC 59.732 52.381 0.00 0.00 37.71 4.85
224 225 1.881973 CCCATTAACCATGCGATCCAG 59.118 52.381 0.00 0.00 0.00 3.86
225 226 1.979855 CCCATTAACCATGCGATCCA 58.020 50.000 0.00 0.00 0.00 3.41
226 227 0.598065 GCCCATTAACCATGCGATCC 59.402 55.000 0.00 0.00 0.00 3.36
227 228 1.609208 AGCCCATTAACCATGCGATC 58.391 50.000 0.00 0.00 0.00 3.69
228 229 2.071778 AAGCCCATTAACCATGCGAT 57.928 45.000 0.00 0.00 0.00 4.58
229 230 1.476085 CAAAGCCCATTAACCATGCGA 59.524 47.619 0.00 0.00 0.00 5.10
230 231 1.471327 CCAAAGCCCATTAACCATGCG 60.471 52.381 0.00 0.00 0.00 4.73
231 232 1.743431 GCCAAAGCCCATTAACCATGC 60.743 52.381 0.00 0.00 0.00 4.06
232 233 2.314323 GCCAAAGCCCATTAACCATG 57.686 50.000 0.00 0.00 0.00 3.66
251 252 0.251297 TCAGTCAATTGGCCACTGGG 60.251 55.000 19.89 4.84 38.48 4.45
252 253 0.883833 GTCAGTCAATTGGCCACTGG 59.116 55.000 19.89 5.81 38.48 4.00
253 254 0.883833 GGTCAGTCAATTGGCCACTG 59.116 55.000 3.88 16.04 42.50 3.66
254 255 0.251341 GGGTCAGTCAATTGGCCACT 60.251 55.000 3.88 0.00 44.79 4.00
255 256 0.539438 TGGGTCAGTCAATTGGCCAC 60.539 55.000 3.88 3.75 44.79 5.01
256 257 0.187117 TTGGGTCAGTCAATTGGCCA 59.813 50.000 0.00 0.00 44.79 5.36
257 258 0.890683 CTTGGGTCAGTCAATTGGCC 59.109 55.000 6.39 0.00 42.22 5.36
258 259 0.244721 GCTTGGGTCAGTCAATTGGC 59.755 55.000 0.50 0.50 0.00 4.52
259 260 1.270550 GTGCTTGGGTCAGTCAATTGG 59.729 52.381 5.42 0.00 0.00 3.16
260 261 1.955778 TGTGCTTGGGTCAGTCAATTG 59.044 47.619 0.00 0.00 0.00 2.32
261 262 2.233271 CTGTGCTTGGGTCAGTCAATT 58.767 47.619 0.00 0.00 0.00 2.32
262 263 1.901591 CTGTGCTTGGGTCAGTCAAT 58.098 50.000 0.00 0.00 0.00 2.57
263 264 0.819259 GCTGTGCTTGGGTCAGTCAA 60.819 55.000 0.00 0.00 0.00 3.18
264 265 1.227943 GCTGTGCTTGGGTCAGTCA 60.228 57.895 0.00 0.00 0.00 3.41
265 266 1.968540 GGCTGTGCTTGGGTCAGTC 60.969 63.158 0.00 0.00 0.00 3.51
266 267 2.113986 GGCTGTGCTTGGGTCAGT 59.886 61.111 0.00 0.00 0.00 3.41
267 268 2.674380 GGGCTGTGCTTGGGTCAG 60.674 66.667 0.00 0.00 0.00 3.51
268 269 2.370459 ATTGGGCTGTGCTTGGGTCA 62.370 55.000 0.00 0.00 0.00 4.02
269 270 0.323360 TATTGGGCTGTGCTTGGGTC 60.323 55.000 0.00 0.00 0.00 4.46
270 271 0.336048 ATATTGGGCTGTGCTTGGGT 59.664 50.000 0.00 0.00 0.00 4.51
271 272 1.956477 GTATATTGGGCTGTGCTTGGG 59.044 52.381 0.00 0.00 0.00 4.12
272 273 2.653726 TGTATATTGGGCTGTGCTTGG 58.346 47.619 0.00 0.00 0.00 3.61
273 274 3.443329 TGTTGTATATTGGGCTGTGCTTG 59.557 43.478 0.00 0.00 0.00 4.01
274 275 3.443681 GTGTTGTATATTGGGCTGTGCTT 59.556 43.478 0.00 0.00 0.00 3.91
275 276 3.016736 GTGTTGTATATTGGGCTGTGCT 58.983 45.455 0.00 0.00 0.00 4.40
276 277 2.752354 TGTGTTGTATATTGGGCTGTGC 59.248 45.455 0.00 0.00 0.00 4.57
277 278 4.202040 CCATGTGTTGTATATTGGGCTGTG 60.202 45.833 0.00 0.00 0.00 3.66
278 279 3.953612 CCATGTGTTGTATATTGGGCTGT 59.046 43.478 0.00 0.00 0.00 4.40
279 280 3.243501 GCCATGTGTTGTATATTGGGCTG 60.244 47.826 0.00 0.00 36.04 4.85
280 281 2.958355 GCCATGTGTTGTATATTGGGCT 59.042 45.455 0.00 0.00 36.04 5.19
281 282 2.692557 TGCCATGTGTTGTATATTGGGC 59.307 45.455 0.00 0.00 39.29 5.36
282 283 4.206375 TCTGCCATGTGTTGTATATTGGG 58.794 43.478 0.00 0.00 0.00 4.12
283 284 5.833406 TTCTGCCATGTGTTGTATATTGG 57.167 39.130 0.00 0.00 0.00 3.16
307 308 5.636543 GCTCTAAGATTTGTGCTGCATTTTT 59.363 36.000 5.27 0.00 0.00 1.94
308 309 5.166398 GCTCTAAGATTTGTGCTGCATTTT 58.834 37.500 5.27 0.00 0.00 1.82
309 310 4.219070 TGCTCTAAGATTTGTGCTGCATTT 59.781 37.500 5.27 0.00 0.00 2.32
310 311 3.760151 TGCTCTAAGATTTGTGCTGCATT 59.240 39.130 5.27 0.00 0.00 3.56
311 312 3.349927 TGCTCTAAGATTTGTGCTGCAT 58.650 40.909 5.27 0.00 0.00 3.96
312 313 2.781923 TGCTCTAAGATTTGTGCTGCA 58.218 42.857 0.00 0.00 0.00 4.41
313 314 3.837213 TTGCTCTAAGATTTGTGCTGC 57.163 42.857 0.00 0.00 0.00 5.25
314 315 7.359765 CCAATTTTTGCTCTAAGATTTGTGCTG 60.360 37.037 3.52 0.00 0.00 4.41
315 316 6.647895 CCAATTTTTGCTCTAAGATTTGTGCT 59.352 34.615 3.52 0.00 0.00 4.40
316 317 6.646240 TCCAATTTTTGCTCTAAGATTTGTGC 59.354 34.615 0.00 0.00 0.00 4.57
317 318 8.653338 CATCCAATTTTTGCTCTAAGATTTGTG 58.347 33.333 0.00 0.00 0.00 3.33
318 319 7.820872 CCATCCAATTTTTGCTCTAAGATTTGT 59.179 33.333 0.00 0.00 0.00 2.83
319 320 7.201582 GCCATCCAATTTTTGCTCTAAGATTTG 60.202 37.037 0.00 0.00 0.00 2.32
320 321 6.820152 GCCATCCAATTTTTGCTCTAAGATTT 59.180 34.615 0.00 0.00 0.00 2.17
321 322 6.343703 GCCATCCAATTTTTGCTCTAAGATT 58.656 36.000 0.00 0.00 0.00 2.40
322 323 5.163374 GGCCATCCAATTTTTGCTCTAAGAT 60.163 40.000 0.00 0.00 0.00 2.40
323 324 4.160252 GGCCATCCAATTTTTGCTCTAAGA 59.840 41.667 0.00 0.00 0.00 2.10
324 325 4.081531 TGGCCATCCAATTTTTGCTCTAAG 60.082 41.667 0.00 0.00 39.99 2.18
325 326 3.837146 TGGCCATCCAATTTTTGCTCTAA 59.163 39.130 0.00 0.00 39.99 2.10
326 327 3.439154 TGGCCATCCAATTTTTGCTCTA 58.561 40.909 0.00 0.00 39.99 2.43
327 328 2.235402 CTGGCCATCCAATTTTTGCTCT 59.765 45.455 5.51 0.00 42.91 4.09
328 329 2.234414 TCTGGCCATCCAATTTTTGCTC 59.766 45.455 5.51 0.00 42.91 4.26
329 330 2.259012 TCTGGCCATCCAATTTTTGCT 58.741 42.857 5.51 0.00 42.91 3.91
330 331 2.766345 TCTGGCCATCCAATTTTTGC 57.234 45.000 5.51 0.00 42.91 3.68
331 332 7.064966 GTCTATTTTCTGGCCATCCAATTTTTG 59.935 37.037 5.51 0.00 42.91 2.44
332 333 7.038088 AGTCTATTTTCTGGCCATCCAATTTTT 60.038 33.333 5.51 0.00 42.91 1.94
333 334 6.441604 AGTCTATTTTCTGGCCATCCAATTTT 59.558 34.615 5.51 0.00 42.91 1.82
334 335 5.960202 AGTCTATTTTCTGGCCATCCAATTT 59.040 36.000 5.51 0.00 42.91 1.82
335 336 5.361857 CAGTCTATTTTCTGGCCATCCAATT 59.638 40.000 5.51 0.00 42.91 2.32
336 337 4.891756 CAGTCTATTTTCTGGCCATCCAAT 59.108 41.667 5.51 7.28 42.91 3.16
337 338 4.018506 TCAGTCTATTTTCTGGCCATCCAA 60.019 41.667 5.51 0.00 42.91 3.53
338 339 3.523157 TCAGTCTATTTTCTGGCCATCCA 59.477 43.478 5.51 0.00 40.85 3.41
339 340 3.879892 GTCAGTCTATTTTCTGGCCATCC 59.120 47.826 5.51 0.00 31.10 3.51
344 345 3.350219 TGGGTCAGTCTATTTTCTGGC 57.650 47.619 0.00 0.00 35.81 4.85
345 346 6.434028 TGAATTTGGGTCAGTCTATTTTCTGG 59.566 38.462 0.00 0.00 33.13 3.86
346 347 7.452880 TGAATTTGGGTCAGTCTATTTTCTG 57.547 36.000 0.00 0.00 0.00 3.02
347 348 8.477419 TTTGAATTTGGGTCAGTCTATTTTCT 57.523 30.769 0.00 0.00 0.00 2.52
348 349 8.978539 GTTTTGAATTTGGGTCAGTCTATTTTC 58.021 33.333 0.00 0.00 0.00 2.29
349 350 8.704668 AGTTTTGAATTTGGGTCAGTCTATTTT 58.295 29.630 0.00 0.00 0.00 1.82
350 351 8.250143 AGTTTTGAATTTGGGTCAGTCTATTT 57.750 30.769 0.00 0.00 0.00 1.40
351 352 7.505585 TGAGTTTTGAATTTGGGTCAGTCTATT 59.494 33.333 0.00 0.00 0.00 1.73
352 353 7.004086 TGAGTTTTGAATTTGGGTCAGTCTAT 58.996 34.615 0.00 0.00 0.00 1.98
353 354 6.361433 TGAGTTTTGAATTTGGGTCAGTCTA 58.639 36.000 0.00 0.00 0.00 2.59
354 355 5.200483 TGAGTTTTGAATTTGGGTCAGTCT 58.800 37.500 0.00 0.00 0.00 3.24
355 356 5.507985 CCTGAGTTTTGAATTTGGGTCAGTC 60.508 44.000 0.00 0.00 0.00 3.51
356 357 4.342092 CCTGAGTTTTGAATTTGGGTCAGT 59.658 41.667 0.00 0.00 0.00 3.41
357 358 4.797275 GCCTGAGTTTTGAATTTGGGTCAG 60.797 45.833 0.00 0.00 0.00 3.51
358 359 3.069443 GCCTGAGTTTTGAATTTGGGTCA 59.931 43.478 0.00 0.00 0.00 4.02
359 360 3.069443 TGCCTGAGTTTTGAATTTGGGTC 59.931 43.478 0.00 0.00 0.00 4.46
360 361 3.037549 TGCCTGAGTTTTGAATTTGGGT 58.962 40.909 0.00 0.00 0.00 4.51
361 362 3.749665 TGCCTGAGTTTTGAATTTGGG 57.250 42.857 0.00 0.00 0.00 4.12
362 363 4.696455 AGTTGCCTGAGTTTTGAATTTGG 58.304 39.130 0.00 0.00 0.00 3.28
363 364 6.756074 TGTAAGTTGCCTGAGTTTTGAATTTG 59.244 34.615 0.00 0.00 0.00 2.32
364 365 6.872920 TGTAAGTTGCCTGAGTTTTGAATTT 58.127 32.000 0.00 0.00 0.00 1.82
365 366 6.463995 TGTAAGTTGCCTGAGTTTTGAATT 57.536 33.333 0.00 0.00 0.00 2.17
366 367 6.096846 ACTTGTAAGTTGCCTGAGTTTTGAAT 59.903 34.615 0.00 0.00 35.21 2.57
367 368 5.417580 ACTTGTAAGTTGCCTGAGTTTTGAA 59.582 36.000 0.00 0.00 35.21 2.69
368 369 4.947388 ACTTGTAAGTTGCCTGAGTTTTGA 59.053 37.500 0.00 0.00 35.21 2.69
369 370 5.248870 ACTTGTAAGTTGCCTGAGTTTTG 57.751 39.130 0.00 0.00 35.21 2.44
370 371 6.619801 CTACTTGTAAGTTGCCTGAGTTTT 57.380 37.500 2.20 0.00 40.37 2.43
380 381 7.492352 AACCACTTTAGCTACTTGTAAGTTG 57.508 36.000 5.24 5.27 40.37 3.16
381 382 7.991460 AGAAACCACTTTAGCTACTTGTAAGTT 59.009 33.333 5.24 4.31 40.37 2.66
382 383 7.506971 AGAAACCACTTTAGCTACTTGTAAGT 58.493 34.615 0.00 0.00 42.91 2.24
383 384 7.656137 TGAGAAACCACTTTAGCTACTTGTAAG 59.344 37.037 0.00 0.00 0.00 2.34
384 385 7.502696 TGAGAAACCACTTTAGCTACTTGTAA 58.497 34.615 0.00 0.00 0.00 2.41
385 386 7.058023 TGAGAAACCACTTTAGCTACTTGTA 57.942 36.000 0.00 0.00 0.00 2.41
386 387 5.925509 TGAGAAACCACTTTAGCTACTTGT 58.074 37.500 0.00 0.00 0.00 3.16
387 388 6.861065 TTGAGAAACCACTTTAGCTACTTG 57.139 37.500 0.00 0.00 0.00 3.16
388 389 7.260558 GTTTGAGAAACCACTTTAGCTACTT 57.739 36.000 0.00 0.00 35.35 2.24
389 390 6.862711 GTTTGAGAAACCACTTTAGCTACT 57.137 37.500 0.00 0.00 35.35 2.57
402 403 3.989817 GCATTCACCATGGTTTGAGAAAC 59.010 43.478 16.84 8.70 40.65 2.78
419 420 2.952310 GACCCTGGTTATTGGAGCATTC 59.048 50.000 0.00 0.00 0.00 2.67
422 423 1.281867 CTGACCCTGGTTATTGGAGCA 59.718 52.381 0.00 0.00 0.00 4.26
426 427 1.354368 ACACCTGACCCTGGTTATTGG 59.646 52.381 0.00 0.00 33.44 3.16
428 429 2.344592 TCACACCTGACCCTGGTTATT 58.655 47.619 0.00 0.00 33.44 1.40
429 430 2.038863 TCACACCTGACCCTGGTTAT 57.961 50.000 0.00 0.00 33.44 1.89
435 436 1.342672 AACCGTTCACACCTGACCCT 61.343 55.000 0.00 0.00 0.00 4.34
471 472 0.323360 GCTTTGGGGCCTCACATGTA 60.323 55.000 3.60 0.00 0.00 2.29
485 487 3.520290 TGGATACAGTCTACCGCTTTG 57.480 47.619 0.00 0.00 46.17 2.77
529 531 0.912486 ACTTCTATTTCCGGGCAGCT 59.088 50.000 0.00 0.00 0.00 4.24
573 575 2.529925 CAGATATGCGCTGCAGGAG 58.470 57.895 17.12 0.00 43.65 3.69
584 586 9.096160 GAAAGGAGTACATGATATGCAGATATG 57.904 37.037 0.00 1.89 0.00 1.78
612 806 3.561725 GCTCAAATGGATGTACCTAGCAC 59.438 47.826 0.00 0.00 39.86 4.40
761 955 0.317160 TGATAATCCCGCGTAGGCAG 59.683 55.000 4.92 0.00 39.92 4.85
903 1101 2.128771 AAATACTGCCAGCACCGATT 57.871 45.000 0.00 0.00 0.00 3.34
959 1157 3.259374 AGAGAGAGCTAGAGAGAGATCGG 59.741 52.174 0.00 0.00 36.95 4.18
1186 1387 9.651718 GAATCTGCAAAAGTTTTATATAGGACG 57.348 33.333 0.00 0.00 0.00 4.79
1218 1425 0.320374 AAGACCAGAAATGGCGTCGA 59.680 50.000 0.00 0.00 0.00 4.20
1252 1464 1.912264 GAGGCCGGGGGTATACCTC 60.912 68.421 21.25 17.88 40.14 3.85
1253 1465 2.203466 GAGGCCGGGGGTATACCT 59.797 66.667 21.25 0.00 40.03 3.08
1254 1466 2.203466 AGAGGCCGGGGGTATACC 59.797 66.667 13.99 13.99 39.11 2.73
1255 1467 2.880380 GCAGAGGCCGGGGGTATAC 61.880 68.421 2.18 0.00 0.00 1.47
1256 1468 2.525877 GCAGAGGCCGGGGGTATA 60.526 66.667 2.18 0.00 0.00 1.47
1257 1469 4.815973 TGCAGAGGCCGGGGGTAT 62.816 66.667 2.18 0.00 40.13 2.73
1258 1470 4.815973 ATGCAGAGGCCGGGGGTA 62.816 66.667 2.18 0.00 40.13 3.69
1261 1473 2.055689 TTATGATGCAGAGGCCGGGG 62.056 60.000 2.18 0.00 40.13 5.73
1262 1474 0.037303 ATTATGATGCAGAGGCCGGG 59.963 55.000 2.18 0.00 40.13 5.73
1263 1475 1.162698 CATTATGATGCAGAGGCCGG 58.837 55.000 0.00 0.00 40.13 6.13
1264 1476 2.174363 TCATTATGATGCAGAGGCCG 57.826 50.000 0.00 0.00 40.13 6.13
1274 1486 6.014840 GGAACCAGAAATGGCATCATTATGAT 60.015 38.462 0.00 1.25 42.29 2.45
1275 1487 5.302568 GGAACCAGAAATGGCATCATTATGA 59.697 40.000 0.00 0.00 42.29 2.15
1276 1488 5.535333 GGAACCAGAAATGGCATCATTATG 58.465 41.667 0.00 0.00 42.29 1.90
1277 1489 5.796424 GGAACCAGAAATGGCATCATTAT 57.204 39.130 0.00 0.00 42.29 1.28
1574 2115 2.279517 GATCCAGTAGCGGCGGTG 60.280 66.667 23.33 4.65 0.00 4.94
1592 2133 4.447180 CCGTAATGTAATGGGAAGGGGATT 60.447 45.833 0.00 0.00 0.00 3.01
1596 2137 3.118186 TGACCGTAATGTAATGGGAAGGG 60.118 47.826 0.00 0.00 0.00 3.95
1617 2158 0.240945 GCATCCGTCAACCAAAGGTG 59.759 55.000 0.00 0.00 35.34 4.00
1635 2176 2.030213 CAGAAGAGATAAACGCAGCAGC 59.970 50.000 0.00 0.00 37.42 5.25
1693 2321 5.815233 TGATACCAGGATTTTGCCAAAAA 57.185 34.783 6.70 0.00 39.53 1.94
1759 2387 9.226606 GAGATGATGCTAATCTACTACAGTACT 57.773 37.037 0.00 0.00 34.50 2.73
1763 2391 6.550843 CCGAGATGATGCTAATCTACTACAG 58.449 44.000 0.00 0.00 34.50 2.74
1764 2392 5.106118 GCCGAGATGATGCTAATCTACTACA 60.106 44.000 0.00 0.00 34.50 2.74
1765 2393 5.106118 TGCCGAGATGATGCTAATCTACTAC 60.106 44.000 0.00 0.00 34.50 2.73
1766 2394 5.010282 TGCCGAGATGATGCTAATCTACTA 58.990 41.667 0.00 0.00 34.50 1.82
1767 2395 3.829026 TGCCGAGATGATGCTAATCTACT 59.171 43.478 0.00 0.00 34.50 2.57
1775 2403 0.317799 CTAGCTGCCGAGATGATGCT 59.682 55.000 0.00 0.00 34.92 3.79
1777 2405 0.317799 AGCTAGCTGCCGAGATGATG 59.682 55.000 18.57 0.00 44.23 3.07
1790 2418 1.136085 CGTATCTCGAGAGCAGCTAGC 60.136 57.143 21.52 6.62 42.86 3.42
1791 2419 2.139917 ACGTATCTCGAGAGCAGCTAG 58.860 52.381 21.52 9.73 42.86 3.42
1849 2484 1.558294 GGAACCGGGTAACTTCTGGAT 59.442 52.381 6.32 0.00 34.80 3.41
1850 2485 0.978907 GGAACCGGGTAACTTCTGGA 59.021 55.000 6.32 0.00 34.80 3.86
1852 2487 2.781681 ATGGAACCGGGTAACTTCTG 57.218 50.000 6.32 0.00 0.00 3.02
1853 2488 3.801307 AAATGGAACCGGGTAACTTCT 57.199 42.857 6.32 0.00 0.00 2.85
1854 2489 3.613193 GCAAAATGGAACCGGGTAACTTC 60.613 47.826 6.32 0.00 0.00 3.01
1855 2490 2.297880 GCAAAATGGAACCGGGTAACTT 59.702 45.455 6.32 0.00 0.00 2.66
1856 2491 1.890489 GCAAAATGGAACCGGGTAACT 59.110 47.619 6.32 0.00 0.00 2.24
1857 2492 1.614413 TGCAAAATGGAACCGGGTAAC 59.386 47.619 6.32 0.00 0.00 2.50
1859 2494 2.223803 ATGCAAAATGGAACCGGGTA 57.776 45.000 6.32 0.00 0.00 3.69
1860 2495 1.347062 AATGCAAAATGGAACCGGGT 58.653 45.000 6.32 0.00 0.00 5.28
1885 2520 3.261897 ACTGGAGTAGGACTGATGGTTTG 59.738 47.826 0.00 0.00 0.00 2.93
1918 2553 5.969741 TCGTGTATCAGACTTTTCGTTTTG 58.030 37.500 0.00 0.00 0.00 2.44
1963 2598 5.642919 GGATCAGGCAATAGATCAGAACATC 59.357 44.000 0.00 0.00 41.84 3.06
1981 2616 2.636893 CCCTATTCTCCCAGTGGATCAG 59.363 54.545 11.95 3.46 40.80 2.90
2047 2683 9.744468 AGTTTTGCACGAATCTTAAAATTTACT 57.256 25.926 0.00 0.00 0.00 2.24
2050 2686 9.701355 CAAAGTTTTGCACGAATCTTAAAATTT 57.299 25.926 0.00 0.00 0.00 1.82
2053 2689 7.820044 ACAAAGTTTTGCACGAATCTTAAAA 57.180 28.000 4.58 0.00 41.79 1.52
2068 2704 4.336153 CGGTACACAACCCTACAAAGTTTT 59.664 41.667 0.00 0.00 46.62 2.43
2076 2712 1.344114 TGGTTCGGTACACAACCCTAC 59.656 52.381 18.09 0.13 46.62 3.18
2082 2718 3.607741 TGAGTTTTGGTTCGGTACACAA 58.392 40.909 0.00 0.00 0.00 3.33
2194 2834 3.190327 TGAAAGGCATGTATTGTGGAACG 59.810 43.478 0.00 0.00 42.39 3.95
2197 2837 5.245751 ACAAATGAAAGGCATGTATTGTGGA 59.754 36.000 0.00 0.00 35.32 4.02
2198 2838 5.481105 ACAAATGAAAGGCATGTATTGTGG 58.519 37.500 0.00 0.00 35.32 4.17
2199 2839 6.157904 TGACAAATGAAAGGCATGTATTGTG 58.842 36.000 0.00 0.00 36.24 3.33
2200 2840 6.343716 TGACAAATGAAAGGCATGTATTGT 57.656 33.333 0.00 0.00 37.87 2.71
2201 2841 7.655236 TTTGACAAATGAAAGGCATGTATTG 57.345 32.000 0.00 0.00 37.28 1.90
2221 2861 9.481340 GCATGTCTAGATACATCTACATTTTGA 57.519 33.333 0.00 0.00 38.01 2.69
2222 2862 9.486497 AGCATGTCTAGATACATCTACATTTTG 57.514 33.333 0.00 0.04 38.01 2.44
2242 2882 9.321532 TGGATGTACCTATATACTAAAGCATGT 57.678 33.333 0.00 0.00 39.86 3.21
2256 2896 9.874205 CATTTGTTCAAAAATGGATGTACCTAT 57.126 29.630 2.11 0.00 41.71 2.57
2257 2897 9.083422 TCATTTGTTCAAAAATGGATGTACCTA 57.917 29.630 9.17 0.00 44.28 3.08
2258 2898 7.961351 TCATTTGTTCAAAAATGGATGTACCT 58.039 30.769 9.17 0.00 44.28 3.08
2259 2899 8.600449 TTCATTTGTTCAAAAATGGATGTACC 57.400 30.769 9.17 0.00 44.28 3.34
2261 2901 9.829507 ACTTTCATTTGTTCAAAAATGGATGTA 57.170 25.926 9.17 0.00 44.28 2.29
2262 2902 8.735692 ACTTTCATTTGTTCAAAAATGGATGT 57.264 26.923 9.17 6.70 44.28 3.06
2263 2903 8.828644 TGACTTTCATTTGTTCAAAAATGGATG 58.171 29.630 9.17 6.18 44.28 3.51
2264 2904 8.961294 TGACTTTCATTTGTTCAAAAATGGAT 57.039 26.923 9.17 0.00 44.28 3.41
2265 2905 8.783833 TTGACTTTCATTTGTTCAAAAATGGA 57.216 26.923 9.17 0.00 44.28 3.41
2266 2906 8.667463 ACTTGACTTTCATTTGTTCAAAAATGG 58.333 29.630 9.17 0.00 44.28 3.16
2280 2920 9.956720 CTCTGTTTCAAAATACTTGACTTTCAT 57.043 29.630 0.00 0.00 0.00 2.57
2281 2921 8.405531 CCTCTGTTTCAAAATACTTGACTTTCA 58.594 33.333 0.00 0.00 0.00 2.69
2282 2922 7.862873 CCCTCTGTTTCAAAATACTTGACTTTC 59.137 37.037 0.00 0.00 0.00 2.62
2283 2923 7.559897 TCCCTCTGTTTCAAAATACTTGACTTT 59.440 33.333 0.00 0.00 0.00 2.66
2284 2924 7.060421 TCCCTCTGTTTCAAAATACTTGACTT 58.940 34.615 0.00 0.00 0.00 3.01
2285 2925 6.601332 TCCCTCTGTTTCAAAATACTTGACT 58.399 36.000 0.00 0.00 0.00 3.41
2286 2926 6.486993 ACTCCCTCTGTTTCAAAATACTTGAC 59.513 38.462 0.00 0.00 0.00 3.18
2287 2927 6.601332 ACTCCCTCTGTTTCAAAATACTTGA 58.399 36.000 0.00 0.00 0.00 3.02
2288 2928 6.884280 ACTCCCTCTGTTTCAAAATACTTG 57.116 37.500 0.00 0.00 0.00 3.16
2289 2929 7.746703 AGTACTCCCTCTGTTTCAAAATACTT 58.253 34.615 0.00 0.00 0.00 2.24
2290 2930 7.317722 AGTACTCCCTCTGTTTCAAAATACT 57.682 36.000 0.00 0.00 0.00 2.12
2291 2931 7.660208 TCAAGTACTCCCTCTGTTTCAAAATAC 59.340 37.037 0.00 0.00 0.00 1.89
2292 2932 7.741785 TCAAGTACTCCCTCTGTTTCAAAATA 58.258 34.615 0.00 0.00 0.00 1.40
2293 2933 6.601332 TCAAGTACTCCCTCTGTTTCAAAAT 58.399 36.000 0.00 0.00 0.00 1.82
2294 2934 5.996644 TCAAGTACTCCCTCTGTTTCAAAA 58.003 37.500 0.00 0.00 0.00 2.44
2295 2935 5.623956 TCAAGTACTCCCTCTGTTTCAAA 57.376 39.130 0.00 0.00 0.00 2.69
2296 2936 5.825593 ATCAAGTACTCCCTCTGTTTCAA 57.174 39.130 0.00 0.00 0.00 2.69
2297 2937 5.071788 ACAATCAAGTACTCCCTCTGTTTCA 59.928 40.000 0.00 0.00 0.00 2.69
2298 2938 5.552178 ACAATCAAGTACTCCCTCTGTTTC 58.448 41.667 0.00 0.00 0.00 2.78
2299 2939 5.568620 ACAATCAAGTACTCCCTCTGTTT 57.431 39.130 0.00 0.00 0.00 2.83
2300 2940 5.552178 GAACAATCAAGTACTCCCTCTGTT 58.448 41.667 0.00 3.08 0.00 3.16
2301 2941 4.322049 CGAACAATCAAGTACTCCCTCTGT 60.322 45.833 0.00 0.00 0.00 3.41
2302 2942 4.177026 CGAACAATCAAGTACTCCCTCTG 58.823 47.826 0.00 0.00 0.00 3.35
2303 2943 3.195825 CCGAACAATCAAGTACTCCCTCT 59.804 47.826 0.00 0.00 0.00 3.69
2304 2944 3.194968 TCCGAACAATCAAGTACTCCCTC 59.805 47.826 0.00 0.00 0.00 4.30
2305 2945 3.170717 TCCGAACAATCAAGTACTCCCT 58.829 45.455 0.00 0.00 0.00 4.20
2306 2946 3.604875 TCCGAACAATCAAGTACTCCC 57.395 47.619 0.00 0.00 0.00 4.30
2307 2947 4.267928 CGAATCCGAACAATCAAGTACTCC 59.732 45.833 0.00 0.00 38.22 3.85
2308 2948 5.100259 TCGAATCCGAACAATCAAGTACTC 58.900 41.667 0.00 0.00 42.51 2.59
2309 2949 5.068234 TCGAATCCGAACAATCAAGTACT 57.932 39.130 0.00 0.00 42.51 2.73
2498 3142 6.147164 TGTGAAACTTGAGATTAATGTCGGAC 59.853 38.462 7.98 0.00 38.04 4.79
2546 3190 0.095935 CCAAGAACTCGCGCATCTTG 59.904 55.000 27.08 27.08 46.06 3.02
2881 3529 9.040939 AGCAAACAGATTGTTATTGTTTTTACC 57.959 29.630 0.00 0.00 40.14 2.85
3112 3763 4.287238 TCTTTTGTTCCTTGCGAAGAAC 57.713 40.909 8.31 8.31 33.73 3.01
4086 4790 2.815503 TCTCACATGGTCAGTTGCAATG 59.184 45.455 0.59 2.37 0.00 2.82
4197 4902 4.160439 TGCAAGTACCAACCAAACAATCAA 59.840 37.500 0.00 0.00 0.00 2.57
4232 4937 1.967319 ATAACAATGGCAGGCTACCG 58.033 50.000 0.00 0.00 0.00 4.02
4518 5241 4.244862 CAGTATTTGCAAATGGAACCCAC 58.755 43.478 30.43 19.61 35.80 4.61
4566 5289 0.535335 TGCGTCTCCCATAAGTCCAC 59.465 55.000 0.00 0.00 0.00 4.02
4599 5322 1.210931 CACCAAGTTGGCTGCATCG 59.789 57.895 22.25 0.00 42.67 3.84
4632 5355 6.996282 GGCTGCTCCCTGTTACTATTTTAATA 59.004 38.462 0.00 0.00 0.00 0.98
4906 5629 4.095946 AGGGATGCAACAACCAATACAAT 58.904 39.130 0.00 0.00 0.00 2.71
5313 6036 5.302568 TGGAACAAAAACCTCTCTAGTACGA 59.697 40.000 0.00 0.00 31.92 3.43
5390 6113 6.448852 TGACATTCATGCATGTATAATTGGC 58.551 36.000 25.43 14.00 37.52 4.52
5412 6135 8.336806 GCAATTTGACTGACATTTGAAAATTGA 58.663 29.630 17.50 0.00 42.16 2.57
5491 6214 3.753797 TGACACTGTACAACAACAAAGCA 59.246 39.130 0.00 0.00 0.00 3.91
5542 6265 6.760298 AGATGTTGACATGTTGTAGATGCTAG 59.240 38.462 0.00 0.00 36.57 3.42
5801 6524 2.397597 AGTGTCCCAAAATTGTTGGCT 58.602 42.857 0.00 0.00 38.23 4.75
5847 6570 2.308866 AGTATACCCTTGCAGCCACTTT 59.691 45.455 0.00 0.00 0.00 2.66
5886 6609 4.334759 GCTTCTGCAGATTGCTTCTATTGA 59.665 41.667 25.54 5.57 45.31 2.57
5887 6610 4.335874 AGCTTCTGCAGATTGCTTCTATTG 59.664 41.667 28.21 7.52 45.31 1.90
5902 6626 3.751175 TGTACAACATGGTAAGCTTCTGC 59.249 43.478 0.00 0.00 40.05 4.26
5946 6670 9.715121 TTCTGTTATCGTTTTTAGGAGTATGTT 57.285 29.630 0.00 0.00 0.00 2.71
5947 6671 9.715121 TTTCTGTTATCGTTTTTAGGAGTATGT 57.285 29.630 0.00 0.00 0.00 2.29
5964 6696 7.839680 ATTCCACCTGTTCTTTTTCTGTTAT 57.160 32.000 0.00 0.00 0.00 1.89


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.