Multiple sequence alignment - TraesCS7D01G244400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G244400 chr7D 100.000 4810 0 0 1 4810 212812420 212807611 0.000000e+00 8883
1 TraesCS7D01G244400 chr7D 92.453 212 16 0 4050 4261 212632881 212632670 2.180000e-78 303
2 TraesCS7D01G244400 chr7A 92.428 3962 156 48 166 4051 224092665 224088772 0.000000e+00 5522
3 TraesCS7D01G244400 chr7A 93.103 348 24 0 4463 4810 48647307 48646960 1.190000e-140 510
4 TraesCS7D01G244400 chr7A 92.775 346 24 1 4463 4808 588403945 588404289 2.580000e-137 499
5 TraesCS7D01G244400 chr7A 92.486 346 26 0 4463 4808 696350985 696350640 3.340000e-136 496
6 TraesCS7D01G244400 chr7A 89.032 155 15 2 4306 4459 34802793 34802946 1.770000e-44 191
7 TraesCS7D01G244400 chr7B 95.917 2327 86 4 1941 4261 188974419 188976742 0.000000e+00 3762
8 TraesCS7D01G244400 chr7B 92.165 753 26 9 855 1576 188973232 188973982 0.000000e+00 1033
9 TraesCS7D01G244400 chr7B 90.909 693 11 14 165 857 188972479 188973119 0.000000e+00 883
10 TraesCS7D01G244400 chr7B 94.512 328 12 1 1619 1940 188973978 188974305 7.190000e-138 501
11 TraesCS7D01G244400 chr7B 92.925 212 15 0 4050 4261 189201155 189201366 4.680000e-80 309
12 TraesCS7D01G244400 chr7B 85.156 128 9 6 49 167 188972197 188972323 6.540000e-24 122
13 TraesCS7D01G244400 chr2D 93.064 346 24 0 4463 4808 432023475 432023130 1.540000e-139 507
14 TraesCS7D01G244400 chr5B 92.486 346 26 0 4463 4808 94669601 94669256 3.340000e-136 496
15 TraesCS7D01G244400 chr5B 75.426 997 210 26 2823 3791 448661638 448660649 7.340000e-123 451
16 TraesCS7D01G244400 chr5B 87.805 164 19 1 4309 4471 671183373 671183210 1.770000e-44 191
17 TraesCS7D01G244400 chr5A 92.486 346 26 0 4463 4808 462857020 462856675 3.340000e-136 496
18 TraesCS7D01G244400 chr5A 78.477 683 132 12 3118 3791 476896213 476895537 2.660000e-117 433
19 TraesCS7D01G244400 chr5A 89.241 158 16 1 4309 4465 683744703 683744546 3.800000e-46 196
20 TraesCS7D01G244400 chr5A 88.272 162 17 2 4299 4459 681767323 681767483 4.910000e-45 193
21 TraesCS7D01G244400 chr3D 92.486 346 26 0 4463 4808 429246935 429247280 3.340000e-136 496
22 TraesCS7D01G244400 chr3D 92.486 346 26 0 4463 4808 555422798 555423143 3.340000e-136 496
23 TraesCS7D01G244400 chr3D 89.441 161 16 1 4299 4459 243573894 243573735 8.160000e-48 202
24 TraesCS7D01G244400 chr3A 92.486 346 26 0 4463 4808 437638201 437638546 3.340000e-136 496
25 TraesCS7D01G244400 chr5D 75.151 994 215 22 2823 3791 375802181 375801195 5.720000e-119 438
26 TraesCS7D01G244400 chr5D 94.366 213 11 1 4050 4261 107155061 107155273 4.640000e-85 326
27 TraesCS7D01G244400 chr4D 92.958 213 14 1 4050 4261 166505748 166505536 4.680000e-80 309
28 TraesCS7D01G244400 chr4D 91.403 221 15 3 4050 4266 434545128 434544908 2.810000e-77 300
29 TraesCS7D01G244400 chr6D 92.488 213 14 2 4051 4261 134333353 134333141 2.180000e-78 303
30 TraesCS7D01G244400 chr3B 91.111 225 17 3 4045 4267 488292229 488292006 7.820000e-78 302
31 TraesCS7D01G244400 chr1B 92.093 215 16 1 4048 4261 474482135 474481921 7.820000e-78 302
32 TraesCS7D01G244400 chr1B 88.554 166 17 2 4300 4465 474481327 474481164 2.940000e-47 200
33 TraesCS7D01G244400 chr1B 90.066 151 15 0 4309 4459 567369389 567369539 3.800000e-46 196
34 TraesCS7D01G244400 chr6B 90.062 161 15 1 4299 4459 35831747 35831906 1.750000e-49 207
35 TraesCS7D01G244400 chr4B 89.404 151 16 0 4309 4459 338454810 338454960 1.770000e-44 191
36 TraesCS7D01G244400 chr4B 87.705 122 13 2 3779 3900 653915531 653915412 1.800000e-29 141


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G244400 chr7D 212807611 212812420 4809 True 8883.0 8883 100.0000 1 4810 1 chr7D.!!$R2 4809
1 TraesCS7D01G244400 chr7A 224088772 224092665 3893 True 5522.0 5522 92.4280 166 4051 1 chr7A.!!$R2 3885
2 TraesCS7D01G244400 chr7B 188972197 188976742 4545 False 1260.2 3762 91.7318 49 4261 5 chr7B.!!$F2 4212
3 TraesCS7D01G244400 chr5B 448660649 448661638 989 True 451.0 451 75.4260 2823 3791 1 chr5B.!!$R2 968
4 TraesCS7D01G244400 chr5A 476895537 476896213 676 True 433.0 433 78.4770 3118 3791 1 chr5A.!!$R2 673
5 TraesCS7D01G244400 chr5D 375801195 375802181 986 True 438.0 438 75.1510 2823 3791 1 chr5D.!!$R1 968
6 TraesCS7D01G244400 chr1B 474481164 474482135 971 True 251.0 302 90.3235 4048 4465 2 chr1B.!!$R1 417

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
19 20 0.105964 ACAACTGTACAAGCGGCTGA 59.894 50.000 1.81 0.00 0.00 4.26 F
22 23 0.244994 ACTGTACAAGCGGCTGAGAG 59.755 55.000 1.81 2.83 0.00 3.20 F
246 414 0.465460 GGGGCAGGCGTCATTATCAA 60.465 55.000 0.00 0.00 0.00 2.57 F
1858 2192 0.533491 ATCGTACCGCCAAGCTGTTA 59.467 50.000 0.00 0.00 0.00 2.41 F
2329 2791 1.273327 GCCTTTGGGTGGAATGAACTG 59.727 52.381 0.00 0.00 34.45 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1598 1928 0.679002 CCTGGCATCCACCTTGTCAG 60.679 60.000 0.00 0.0 44.52 3.51 R
1600 1930 1.379044 CCCTGGCATCCACCTTGTC 60.379 63.158 0.00 0.0 0.00 3.18 R
2059 2513 1.656095 GACATCTCGGCGTTCTTCTTG 59.344 52.381 6.85 0.0 0.00 3.02 R
2792 3254 1.293498 GGTGCTCGGTGACATGTCT 59.707 57.895 25.55 0.0 0.00 3.41 R
4263 4786 0.031994 ATGTTGCGGCACCTTTCAAC 59.968 50.000 0.05 0.0 39.23 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.616969 ACAACTGTACAAGCGGCTG 58.383 52.632 1.81 0.10 0.00 4.85
19 20 0.105964 ACAACTGTACAAGCGGCTGA 59.894 50.000 1.81 0.00 0.00 4.26
20 21 0.792640 CAACTGTACAAGCGGCTGAG 59.207 55.000 1.81 1.69 0.00 3.35
21 22 0.679505 AACTGTACAAGCGGCTGAGA 59.320 50.000 1.81 0.00 0.00 3.27
22 23 0.244994 ACTGTACAAGCGGCTGAGAG 59.755 55.000 1.81 2.83 0.00 3.20
23 24 1.079819 TGTACAAGCGGCTGAGAGC 60.080 57.895 1.81 0.00 41.46 4.09
24 25 1.079819 GTACAAGCGGCTGAGAGCA 60.080 57.895 1.81 0.00 44.75 4.26
25 26 0.670546 GTACAAGCGGCTGAGAGCAA 60.671 55.000 1.81 0.00 44.75 3.91
26 27 0.670546 TACAAGCGGCTGAGAGCAAC 60.671 55.000 1.81 0.00 44.75 4.17
27 28 2.359230 AAGCGGCTGAGAGCAACC 60.359 61.111 1.81 0.00 44.75 3.77
69 70 2.240493 ATTGATTGGTCGGACGGATC 57.760 50.000 12.66 12.66 0.00 3.36
70 71 0.899019 TTGATTGGTCGGACGGATCA 59.101 50.000 16.32 16.32 32.70 2.92
77 87 4.940905 TGGTCGGACGGATCATAATAAA 57.059 40.909 1.43 0.00 28.38 1.40
79 89 6.593268 TGGTCGGACGGATCATAATAAATA 57.407 37.500 1.43 0.00 28.38 1.40
82 92 5.004156 GTCGGACGGATCATAATAAATACGC 59.996 44.000 0.00 0.00 32.32 4.42
116 126 3.668386 GCGTTTGCTAAGGGTGCT 58.332 55.556 2.94 0.00 38.39 4.40
142 152 5.163972 TGCTTTCGCAACATCAATTATTTGC 60.164 36.000 0.00 0.00 44.62 3.68
182 350 1.097547 AAGCCATGATTCCGGAAGCG 61.098 55.000 26.09 13.99 0.00 4.68
241 409 3.965258 TGTGGGGCAGGCGTCATT 61.965 61.111 0.00 0.00 0.00 2.57
244 412 1.148273 TGGGGCAGGCGTCATTATC 59.852 57.895 0.00 0.00 0.00 1.75
245 413 1.148273 GGGGCAGGCGTCATTATCA 59.852 57.895 0.00 0.00 0.00 2.15
246 414 0.465460 GGGGCAGGCGTCATTATCAA 60.465 55.000 0.00 0.00 0.00 2.57
247 415 1.609208 GGGCAGGCGTCATTATCAAT 58.391 50.000 0.00 0.00 0.00 2.57
248 416 1.537202 GGGCAGGCGTCATTATCAATC 59.463 52.381 0.00 0.00 0.00 2.67
249 417 2.221169 GGCAGGCGTCATTATCAATCA 58.779 47.619 0.00 0.00 0.00 2.57
340 508 2.125350 CTCGGCACTCTGCTTCCC 60.125 66.667 0.00 0.00 44.28 3.97
354 522 3.323758 TTCCCCGCCGATCAACAGG 62.324 63.158 0.00 0.00 0.00 4.00
393 561 5.604758 AGTAGTCCGTATAAAAACCTCCC 57.395 43.478 0.00 0.00 0.00 4.30
411 579 0.842030 CCCCCATCAGCCTAGCCATA 60.842 60.000 0.00 0.00 0.00 2.74
510 678 3.175109 ACTGCTAAACTATGCCGGTAC 57.825 47.619 1.90 0.00 0.00 3.34
669 840 2.771943 CCTCCCATCTGTAAAGCTACCA 59.228 50.000 0.00 0.00 0.00 3.25
680 851 5.761205 TGTAAAGCTACCATCTCTCTCTCT 58.239 41.667 0.00 0.00 0.00 3.10
683 854 4.729552 AGCTACCATCTCTCTCTCTCAT 57.270 45.455 0.00 0.00 0.00 2.90
684 855 4.655963 AGCTACCATCTCTCTCTCTCATC 58.344 47.826 0.00 0.00 0.00 2.92
685 856 4.352001 AGCTACCATCTCTCTCTCTCATCT 59.648 45.833 0.00 0.00 0.00 2.90
686 857 4.697352 GCTACCATCTCTCTCTCTCATCTC 59.303 50.000 0.00 0.00 0.00 2.75
687 858 5.513788 GCTACCATCTCTCTCTCTCATCTCT 60.514 48.000 0.00 0.00 0.00 3.10
811 983 5.136105 CGGTACCCATTTAGTAGGAGTACT 58.864 45.833 6.25 0.00 42.49 2.73
812 984 6.299141 CGGTACCCATTTAGTAGGAGTACTA 58.701 44.000 6.25 0.00 40.23 1.82
813 985 6.429385 CGGTACCCATTTAGTAGGAGTACTAG 59.571 46.154 6.25 0.00 41.75 2.57
1460 1779 4.202141 TGCTTATTCTTATTGTGGGCATGC 60.202 41.667 9.90 9.90 0.00 4.06
1553 1883 2.098117 AGCTGAAACAGTGTGCTCAAAC 59.902 45.455 0.00 0.00 33.43 2.93
1576 1906 2.032550 CGCTATGCTGATTGGAGTTTGG 59.967 50.000 0.00 0.00 0.00 3.28
1577 1907 3.019564 GCTATGCTGATTGGAGTTTGGT 58.980 45.455 0.00 0.00 0.00 3.67
1582 1912 2.749621 GCTGATTGGAGTTTGGTAGGTG 59.250 50.000 0.00 0.00 0.00 4.00
1583 1913 2.749621 CTGATTGGAGTTTGGTAGGTGC 59.250 50.000 0.00 0.00 0.00 5.01
1592 1922 1.896220 TTGGTAGGTGCAAGCTCAAG 58.104 50.000 0.00 0.00 44.61 3.02
1613 1943 1.896220 TTGACTGACAAGGTGGATGC 58.104 50.000 0.00 0.00 34.20 3.91
1650 1984 6.620678 TCTAAGCATTTTTCAGTTACCATGC 58.379 36.000 0.00 0.00 37.82 4.06
1652 1986 3.055891 AGCATTTTTCAGTTACCATGCCC 60.056 43.478 0.00 0.00 38.22 5.36
1754 2088 4.809070 GCTGTCTTCTGCCTGGTT 57.191 55.556 0.00 0.00 33.40 3.67
1832 2166 4.223800 TCCGCAGTGGAATGCATC 57.776 55.556 0.00 0.00 46.38 3.91
1858 2192 0.533491 ATCGTACCGCCAAGCTGTTA 59.467 50.000 0.00 0.00 0.00 2.41
2012 2465 7.389330 TGTTGCCCTTTGTTGGTATATATATCG 59.611 37.037 0.00 0.00 0.00 2.92
2013 2466 6.411376 TGCCCTTTGTTGGTATATATATCGG 58.589 40.000 0.00 0.00 0.00 4.18
2291 2753 4.037923 TGTTGCTTCCTTGGTGAAATCTTC 59.962 41.667 0.00 0.00 0.00 2.87
2329 2791 1.273327 GCCTTTGGGTGGAATGAACTG 59.727 52.381 0.00 0.00 34.45 3.16
2522 2984 3.772572 TCCCTCGTAGAAACCATCATTCA 59.227 43.478 0.00 0.00 34.09 2.57
2644 3106 2.046023 TGCGACAATCAGCAGGGG 60.046 61.111 0.00 0.00 38.59 4.79
2668 3130 1.340697 TGAAGCTGATGCCAATGCTCT 60.341 47.619 0.00 0.00 40.80 4.09
2792 3254 3.506455 AGTCGAAGAGGAAGACGAAATCA 59.494 43.478 0.00 0.00 39.65 2.57
2969 3431 4.350245 TGGGAGAACTAACTAGCAAGCTA 58.650 43.478 1.37 1.37 0.00 3.32
3263 3746 2.210961 CAGCCATATCAGCTCACACTG 58.789 52.381 0.00 0.00 38.95 3.66
3614 4100 2.435586 CTGCTCCACCTTCTGGCG 60.436 66.667 0.00 0.00 40.39 5.69
3620 4106 1.738099 CCACCTTCTGGCGTTCTCG 60.738 63.158 0.00 0.00 36.63 4.04
3656 4142 4.373116 GTGCTGCGGGTCGAGGAA 62.373 66.667 0.00 0.00 0.00 3.36
3668 4154 1.602605 CGAGGAAAACCGGGCCTTT 60.603 57.895 6.32 1.72 30.70 3.11
3671 4157 0.114364 AGGAAAACCGGGCCTTTGAT 59.886 50.000 6.32 0.00 0.00 2.57
3814 4303 3.702792 TCTGCAGATATAGCTAGACCCC 58.297 50.000 13.74 0.00 0.00 4.95
3820 4315 4.636648 CAGATATAGCTAGACCCCGTAGTG 59.363 50.000 0.00 0.00 0.00 2.74
4107 4630 8.286191 AGCCTAACTAAAATCTGAAATTCTGG 57.714 34.615 0.12 0.00 0.00 3.86
4121 4644 0.409092 TTCTGGTGGCCCATTCATGT 59.591 50.000 0.00 0.00 40.90 3.21
4135 4658 3.979101 TTCATGTATGGCTGTGAGTGA 57.021 42.857 0.00 0.00 0.00 3.41
4179 4702 1.133792 CCCACCTTGGAAGTTGAGTGT 60.134 52.381 0.00 0.00 40.96 3.55
4234 4757 4.910195 ACCACTTGTATGAGCATGAGAAA 58.090 39.130 0.00 0.00 0.00 2.52
4266 4789 3.181967 CGCGCTCCTCCTTCGTTG 61.182 66.667 5.56 0.00 0.00 4.10
4267 4790 2.261671 GCGCTCCTCCTTCGTTGA 59.738 61.111 0.00 0.00 0.00 3.18
4268 4791 1.374252 GCGCTCCTCCTTCGTTGAA 60.374 57.895 0.00 0.00 0.00 2.69
4269 4792 0.949105 GCGCTCCTCCTTCGTTGAAA 60.949 55.000 0.00 0.00 0.00 2.69
4270 4793 1.071605 CGCTCCTCCTTCGTTGAAAG 58.928 55.000 0.00 0.00 0.00 2.62
4271 4794 1.443802 GCTCCTCCTTCGTTGAAAGG 58.556 55.000 0.00 0.00 46.11 3.11
4272 4795 1.270893 GCTCCTCCTTCGTTGAAAGGT 60.271 52.381 2.81 0.00 45.16 3.50
4273 4796 2.417719 CTCCTCCTTCGTTGAAAGGTG 58.582 52.381 2.81 0.87 45.16 4.00
4274 4797 0.875059 CCTCCTTCGTTGAAAGGTGC 59.125 55.000 2.81 0.00 45.16 5.01
4276 4799 0.882927 TCCTTCGTTGAAAGGTGCCG 60.883 55.000 2.81 0.00 45.16 5.69
4277 4800 1.082104 CTTCGTTGAAAGGTGCCGC 60.082 57.895 0.00 0.00 0.00 6.53
4278 4801 1.781025 CTTCGTTGAAAGGTGCCGCA 61.781 55.000 0.00 0.00 0.00 5.69
4279 4802 1.377366 TTCGTTGAAAGGTGCCGCAA 61.377 50.000 0.00 0.00 0.00 4.85
4281 4804 1.435515 GTTGAAAGGTGCCGCAACA 59.564 52.632 11.84 0.00 40.11 3.33
4282 4805 0.031994 GTTGAAAGGTGCCGCAACAT 59.968 50.000 11.84 0.00 40.11 2.71
4285 4808 1.852067 GAAAGGTGCCGCAACATCGT 61.852 55.000 11.84 0.00 0.00 3.73
4286 4809 0.604243 AAAGGTGCCGCAACATCGTA 60.604 50.000 11.84 0.00 0.00 3.43
4314 5391 1.270550 CACTGTTCCAGATTTGTGCCC 59.729 52.381 0.00 0.00 35.18 5.36
4336 5413 6.648725 GCCCTAGATTTGATCTGTTCATCTAC 59.351 42.308 0.00 0.00 40.51 2.59
4346 5423 7.880105 TGATCTGTTCATCTACTATGCTAGTG 58.120 38.462 0.00 0.00 39.81 2.74
4347 5424 7.503902 TGATCTGTTCATCTACTATGCTAGTGT 59.496 37.037 0.00 0.00 39.81 3.55
4348 5425 7.032377 TCTGTTCATCTACTATGCTAGTGTG 57.968 40.000 6.21 3.86 39.81 3.82
4368 5445 8.206325 AGTGTGCATGATTAGTTTAATCTCAG 57.794 34.615 0.00 2.58 43.79 3.35
4450 5527 9.034544 GCTCATATATTCAACAATCCAAAAACC 57.965 33.333 0.00 0.00 0.00 3.27
4462 5539 7.257722 ACAATCCAAAAACCTGATTATAAGCG 58.742 34.615 0.00 0.00 0.00 4.68
4465 5542 7.026631 TCCAAAAACCTGATTATAAGCGATG 57.973 36.000 0.00 0.00 0.00 3.84
4466 5543 6.826231 TCCAAAAACCTGATTATAAGCGATGA 59.174 34.615 0.00 0.00 0.00 2.92
4467 5544 6.912591 CCAAAAACCTGATTATAAGCGATGAC 59.087 38.462 0.00 0.00 0.00 3.06
4468 5545 7.201732 CCAAAAACCTGATTATAAGCGATGACT 60.202 37.037 0.00 0.00 0.00 3.41
4469 5546 7.484035 AAAACCTGATTATAAGCGATGACTC 57.516 36.000 0.00 0.00 0.00 3.36
4470 5547 5.140747 ACCTGATTATAAGCGATGACTCC 57.859 43.478 0.00 0.00 0.00 3.85
4471 5548 4.588951 ACCTGATTATAAGCGATGACTCCA 59.411 41.667 0.00 0.00 0.00 3.86
4472 5549 5.247110 ACCTGATTATAAGCGATGACTCCAT 59.753 40.000 0.00 0.00 35.29 3.41
4473 5550 6.169094 CCTGATTATAAGCGATGACTCCATT 58.831 40.000 0.00 0.00 32.09 3.16
4474 5551 6.091849 CCTGATTATAAGCGATGACTCCATTG 59.908 42.308 0.00 0.00 37.26 2.82
4475 5552 6.524734 TGATTATAAGCGATGACTCCATTGT 58.475 36.000 0.00 0.00 36.70 2.71
4476 5553 6.424812 TGATTATAAGCGATGACTCCATTGTG 59.575 38.462 0.00 0.00 36.70 3.33
4477 5554 1.742761 AAGCGATGACTCCATTGTGG 58.257 50.000 0.00 0.00 39.43 4.17
4478 5555 0.904649 AGCGATGACTCCATTGTGGA 59.095 50.000 0.00 0.00 45.98 4.02
4491 5568 5.227152 TCCATTGTGGATTCGTATATGTCG 58.773 41.667 0.00 0.00 42.67 4.35
4492 5569 4.988540 CCATTGTGGATTCGTATATGTCGT 59.011 41.667 0.00 0.00 40.96 4.34
4493 5570 5.465390 CCATTGTGGATTCGTATATGTCGTT 59.535 40.000 0.00 0.00 40.96 3.85
4494 5571 6.018262 CCATTGTGGATTCGTATATGTCGTTT 60.018 38.462 0.00 0.00 40.96 3.60
4495 5572 5.959652 TGTGGATTCGTATATGTCGTTTG 57.040 39.130 0.00 0.00 0.00 2.93
4496 5573 5.652518 TGTGGATTCGTATATGTCGTTTGA 58.347 37.500 0.00 0.00 0.00 2.69
4497 5574 5.517411 TGTGGATTCGTATATGTCGTTTGAC 59.483 40.000 0.00 0.00 45.71 3.18
4511 5588 3.963383 GTTTGACAACGACAAGGACAT 57.037 42.857 0.00 0.00 0.00 3.06
4513 5590 5.607119 GTTTGACAACGACAAGGACATAT 57.393 39.130 0.00 0.00 0.00 1.78
4514 5591 5.382303 GTTTGACAACGACAAGGACATATG 58.618 41.667 0.00 0.00 0.00 1.78
4515 5592 3.595173 TGACAACGACAAGGACATATGG 58.405 45.455 7.80 0.00 0.00 2.74
4516 5593 2.936498 GACAACGACAAGGACATATGGG 59.064 50.000 7.80 0.00 0.00 4.00
4517 5594 1.670811 CAACGACAAGGACATATGGGC 59.329 52.381 7.80 0.00 0.00 5.36
4518 5595 1.204146 ACGACAAGGACATATGGGCT 58.796 50.000 7.80 0.00 0.00 5.19
4519 5596 1.134401 ACGACAAGGACATATGGGCTG 60.134 52.381 7.80 1.60 0.00 4.85
4520 5597 1.312815 GACAAGGACATATGGGCTGC 58.687 55.000 7.80 0.00 0.00 5.25
4521 5598 0.464373 ACAAGGACATATGGGCTGCG 60.464 55.000 7.80 0.00 0.00 5.18
4522 5599 1.526917 AAGGACATATGGGCTGCGC 60.527 57.895 10.06 10.06 0.00 6.09
4523 5600 1.987807 AAGGACATATGGGCTGCGCT 61.988 55.000 17.81 6.14 0.00 5.92
4524 5601 1.963338 GGACATATGGGCTGCGCTC 60.963 63.158 17.81 6.33 0.00 5.03
4525 5602 2.280389 ACATATGGGCTGCGCTCG 60.280 61.111 17.81 0.00 0.00 5.03
4526 5603 2.029518 CATATGGGCTGCGCTCGA 59.970 61.111 17.81 3.47 0.00 4.04
4527 5604 2.025969 CATATGGGCTGCGCTCGAG 61.026 63.158 17.81 8.45 0.00 4.04
4528 5605 3.231889 ATATGGGCTGCGCTCGAGG 62.232 63.158 15.58 5.53 0.00 4.63
4534 5611 3.049674 CTGCGCTCGAGGCCAAAA 61.050 61.111 15.58 0.00 37.74 2.44
4535 5612 2.359850 TGCGCTCGAGGCCAAAAT 60.360 55.556 15.58 0.00 37.74 1.82
4536 5613 1.926511 CTGCGCTCGAGGCCAAAATT 61.927 55.000 15.58 0.00 37.74 1.82
4537 5614 1.514873 GCGCTCGAGGCCAAAATTG 60.515 57.895 15.58 0.00 37.74 2.32
4548 5625 1.485124 CCAAAATTGGGGCCTAGGAC 58.515 55.000 14.75 10.52 44.70 3.85
4549 5626 1.102978 CAAAATTGGGGCCTAGGACG 58.897 55.000 14.75 0.00 0.00 4.79
4550 5627 0.683179 AAAATTGGGGCCTAGGACGC 60.683 55.000 24.71 24.71 36.54 5.19
4551 5628 2.567664 AAATTGGGGCCTAGGACGCC 62.568 60.000 27.86 25.39 46.29 5.68
4556 5633 4.208686 GGCCTAGGACGCCGACAG 62.209 72.222 14.75 0.00 36.47 3.51
4557 5634 3.450115 GCCTAGGACGCCGACAGT 61.450 66.667 14.75 0.00 0.00 3.55
4558 5635 2.490217 CCTAGGACGCCGACAGTG 59.510 66.667 1.05 0.00 0.00 3.66
4559 5636 2.044555 CCTAGGACGCCGACAGTGA 61.045 63.158 1.05 0.00 0.00 3.41
4560 5637 1.429825 CTAGGACGCCGACAGTGAG 59.570 63.158 0.00 0.00 0.00 3.51
4561 5638 1.303074 TAGGACGCCGACAGTGAGT 60.303 57.895 0.00 0.00 0.00 3.41
4562 5639 0.892358 TAGGACGCCGACAGTGAGTT 60.892 55.000 0.00 0.00 0.00 3.01
4563 5640 2.022129 GGACGCCGACAGTGAGTTG 61.022 63.158 0.00 0.00 0.00 3.16
4564 5641 1.299926 GACGCCGACAGTGAGTTGT 60.300 57.895 0.00 0.00 0.00 3.32
4565 5642 0.039798 GACGCCGACAGTGAGTTGTA 60.040 55.000 0.00 0.00 0.00 2.41
4566 5643 0.318445 ACGCCGACAGTGAGTTGTAC 60.318 55.000 0.00 0.00 0.00 2.90
4567 5644 1.334992 CGCCGACAGTGAGTTGTACG 61.335 60.000 0.00 0.00 0.00 3.67
4568 5645 0.318445 GCCGACAGTGAGTTGTACGT 60.318 55.000 0.00 0.00 0.00 3.57
4569 5646 1.682982 CCGACAGTGAGTTGTACGTC 58.317 55.000 0.00 0.00 0.00 4.34
4570 5647 1.002142 CCGACAGTGAGTTGTACGTCA 60.002 52.381 0.00 0.00 0.00 4.35
4571 5648 2.351447 CCGACAGTGAGTTGTACGTCAT 60.351 50.000 0.00 0.00 0.00 3.06
4572 5649 2.656897 CGACAGTGAGTTGTACGTCATG 59.343 50.000 0.00 0.00 0.00 3.07
4573 5650 2.987149 GACAGTGAGTTGTACGTCATGG 59.013 50.000 0.00 0.00 0.00 3.66
4574 5651 2.626266 ACAGTGAGTTGTACGTCATGGA 59.374 45.455 0.00 0.00 0.00 3.41
4575 5652 3.245797 CAGTGAGTTGTACGTCATGGAG 58.754 50.000 0.00 0.00 0.00 3.86
4576 5653 1.993370 GTGAGTTGTACGTCATGGAGC 59.007 52.381 0.00 0.00 0.00 4.70
4577 5654 1.616374 TGAGTTGTACGTCATGGAGCA 59.384 47.619 0.00 0.00 0.00 4.26
4578 5655 2.036604 TGAGTTGTACGTCATGGAGCAA 59.963 45.455 0.00 0.00 0.00 3.91
4579 5656 3.262420 GAGTTGTACGTCATGGAGCAAT 58.738 45.455 0.00 0.00 0.00 3.56
4580 5657 3.674997 AGTTGTACGTCATGGAGCAATT 58.325 40.909 0.00 0.00 0.00 2.32
4581 5658 3.684788 AGTTGTACGTCATGGAGCAATTC 59.315 43.478 0.00 0.00 0.00 2.17
4582 5659 3.610040 TGTACGTCATGGAGCAATTCT 57.390 42.857 0.00 0.00 0.00 2.40
4583 5660 4.729227 TGTACGTCATGGAGCAATTCTA 57.271 40.909 0.00 0.00 0.00 2.10
4584 5661 5.276461 TGTACGTCATGGAGCAATTCTAT 57.724 39.130 0.00 0.00 0.00 1.98
4585 5662 5.049828 TGTACGTCATGGAGCAATTCTATG 58.950 41.667 0.00 0.00 43.90 2.23
4591 5668 6.484364 TCATGGAGCAATTCTATGACTACA 57.516 37.500 0.00 0.00 45.52 2.74
4592 5669 6.888105 TCATGGAGCAATTCTATGACTACAA 58.112 36.000 0.00 0.00 45.52 2.41
4593 5670 6.988580 TCATGGAGCAATTCTATGACTACAAG 59.011 38.462 0.00 0.00 45.52 3.16
4594 5671 6.544928 TGGAGCAATTCTATGACTACAAGA 57.455 37.500 0.00 0.00 0.00 3.02
4595 5672 7.129457 TGGAGCAATTCTATGACTACAAGAT 57.871 36.000 0.00 0.00 0.00 2.40
4596 5673 6.988580 TGGAGCAATTCTATGACTACAAGATG 59.011 38.462 0.00 0.00 0.00 2.90
4597 5674 7.147672 TGGAGCAATTCTATGACTACAAGATGA 60.148 37.037 0.00 0.00 0.00 2.92
4598 5675 7.170658 GGAGCAATTCTATGACTACAAGATGAC 59.829 40.741 0.00 0.00 0.00 3.06
4599 5676 7.790027 AGCAATTCTATGACTACAAGATGACT 58.210 34.615 0.00 0.00 0.00 3.41
4600 5677 7.710044 AGCAATTCTATGACTACAAGATGACTG 59.290 37.037 0.00 0.00 0.00 3.51
4601 5678 7.708322 GCAATTCTATGACTACAAGATGACTGA 59.292 37.037 0.00 0.00 0.00 3.41
4602 5679 9.761504 CAATTCTATGACTACAAGATGACTGAT 57.238 33.333 0.00 0.00 0.00 2.90
4603 5680 9.761504 AATTCTATGACTACAAGATGACTGATG 57.238 33.333 0.00 0.00 0.00 3.07
4604 5681 6.743110 TCTATGACTACAAGATGACTGATGC 58.257 40.000 0.00 0.00 0.00 3.91
4605 5682 4.806640 TGACTACAAGATGACTGATGCA 57.193 40.909 0.00 0.00 0.00 3.96
4606 5683 4.498241 TGACTACAAGATGACTGATGCAC 58.502 43.478 0.00 0.00 0.00 4.57
4607 5684 3.515630 ACTACAAGATGACTGATGCACG 58.484 45.455 0.00 0.00 0.00 5.34
4608 5685 1.081892 ACAAGATGACTGATGCACGC 58.918 50.000 0.00 0.00 0.00 5.34
4609 5686 1.338484 ACAAGATGACTGATGCACGCT 60.338 47.619 0.00 0.00 0.00 5.07
4610 5687 1.326852 CAAGATGACTGATGCACGCTC 59.673 52.381 0.00 0.00 0.00 5.03
4611 5688 0.822811 AGATGACTGATGCACGCTCT 59.177 50.000 0.00 0.00 0.00 4.09
4612 5689 0.928922 GATGACTGATGCACGCTCTG 59.071 55.000 0.00 0.00 0.00 3.35
4613 5690 0.248565 ATGACTGATGCACGCTCTGT 59.751 50.000 0.00 0.00 0.00 3.41
4614 5691 0.033920 TGACTGATGCACGCTCTGTT 59.966 50.000 0.00 0.00 0.00 3.16
4615 5692 0.441533 GACTGATGCACGCTCTGTTG 59.558 55.000 0.00 0.00 0.00 3.33
4616 5693 0.250038 ACTGATGCACGCTCTGTTGT 60.250 50.000 0.00 0.00 0.00 3.32
4617 5694 0.870393 CTGATGCACGCTCTGTTGTT 59.130 50.000 0.00 0.00 0.00 2.83
4618 5695 0.867746 TGATGCACGCTCTGTTGTTC 59.132 50.000 0.00 0.00 0.00 3.18
4619 5696 0.867746 GATGCACGCTCTGTTGTTCA 59.132 50.000 0.00 0.00 0.00 3.18
4620 5697 0.870393 ATGCACGCTCTGTTGTTCAG 59.130 50.000 0.00 0.00 44.85 3.02
4621 5698 1.082496 GCACGCTCTGTTGTTCAGC 60.082 57.895 0.00 0.00 43.32 4.26
4622 5699 1.775039 GCACGCTCTGTTGTTCAGCA 61.775 55.000 0.00 0.00 43.32 4.41
4623 5700 0.870393 CACGCTCTGTTGTTCAGCAT 59.130 50.000 0.00 0.00 43.32 3.79
4624 5701 0.870393 ACGCTCTGTTGTTCAGCATG 59.130 50.000 0.00 0.00 43.32 4.06
4625 5702 0.453950 CGCTCTGTTGTTCAGCATGC 60.454 55.000 10.51 10.51 43.32 4.06
4626 5703 0.879765 GCTCTGTTGTTCAGCATGCT 59.120 50.000 16.30 16.30 43.32 3.79
4627 5704 1.135746 GCTCTGTTGTTCAGCATGCTC 60.136 52.381 19.68 7.68 43.32 4.26
4628 5705 2.148768 CTCTGTTGTTCAGCATGCTCA 58.851 47.619 19.68 10.67 43.32 4.26
4629 5706 2.747989 CTCTGTTGTTCAGCATGCTCAT 59.252 45.455 19.68 0.00 43.32 2.90
4630 5707 2.486592 TCTGTTGTTCAGCATGCTCATG 59.513 45.455 19.68 8.32 43.32 3.07
4631 5708 2.486592 CTGTTGTTCAGCATGCTCATGA 59.513 45.455 19.68 10.94 40.44 3.07
4632 5709 2.486592 TGTTGTTCAGCATGCTCATGAG 59.513 45.455 19.68 18.84 41.20 2.90
4633 5710 2.745821 GTTGTTCAGCATGCTCATGAGA 59.254 45.455 27.04 9.10 41.20 3.27
4634 5711 3.277142 TGTTCAGCATGCTCATGAGAT 57.723 42.857 27.04 13.48 41.20 2.75
4635 5712 4.411256 TGTTCAGCATGCTCATGAGATA 57.589 40.909 27.04 14.26 41.20 1.98
4636 5713 4.124970 TGTTCAGCATGCTCATGAGATAC 58.875 43.478 27.04 9.25 41.20 2.24
4637 5714 4.124970 GTTCAGCATGCTCATGAGATACA 58.875 43.478 27.04 14.90 41.20 2.29
4638 5715 3.991367 TCAGCATGCTCATGAGATACAG 58.009 45.455 27.04 11.15 41.20 2.74
4639 5716 3.387050 TCAGCATGCTCATGAGATACAGT 59.613 43.478 27.04 2.58 41.20 3.55
4640 5717 3.741856 CAGCATGCTCATGAGATACAGTC 59.258 47.826 27.04 7.09 41.20 3.51
4641 5718 2.730404 GCATGCTCATGAGATACAGTCG 59.270 50.000 27.04 8.64 41.20 4.18
4642 5719 2.498807 TGCTCATGAGATACAGTCGC 57.501 50.000 27.04 8.83 0.00 5.19
4643 5720 2.027385 TGCTCATGAGATACAGTCGCT 58.973 47.619 27.04 0.00 0.00 4.93
4644 5721 2.033927 TGCTCATGAGATACAGTCGCTC 59.966 50.000 27.04 4.35 0.00 5.03
4645 5722 2.914861 CTCATGAGATACAGTCGCTCG 58.085 52.381 18.34 0.00 0.00 5.03
4646 5723 1.002359 TCATGAGATACAGTCGCTCGC 60.002 52.381 0.00 0.00 0.00 5.03
4647 5724 1.025041 ATGAGATACAGTCGCTCGCA 58.975 50.000 0.00 0.00 0.00 5.10
4648 5725 0.808755 TGAGATACAGTCGCTCGCAA 59.191 50.000 0.00 0.00 0.00 4.85
4649 5726 1.201414 TGAGATACAGTCGCTCGCAAA 59.799 47.619 0.00 0.00 0.00 3.68
4650 5727 1.849219 GAGATACAGTCGCTCGCAAAG 59.151 52.381 0.00 0.00 0.00 2.77
4651 5728 0.924090 GATACAGTCGCTCGCAAAGG 59.076 55.000 0.00 0.00 0.00 3.11
4652 5729 0.530744 ATACAGTCGCTCGCAAAGGA 59.469 50.000 0.00 0.00 0.00 3.36
4653 5730 0.315886 TACAGTCGCTCGCAAAGGAA 59.684 50.000 0.00 0.00 0.00 3.36
4654 5731 1.222115 ACAGTCGCTCGCAAAGGAAC 61.222 55.000 0.00 0.00 0.00 3.62
4677 5754 5.794687 TTGAGTACTTCAAGTGTGTGTTG 57.205 39.130 0.00 0.00 40.82 3.33
4678 5755 3.621268 TGAGTACTTCAAGTGTGTGTTGC 59.379 43.478 0.00 0.00 31.34 4.17
4679 5756 2.943033 AGTACTTCAAGTGTGTGTTGCC 59.057 45.455 0.00 0.00 0.00 4.52
4680 5757 0.732571 ACTTCAAGTGTGTGTTGCCG 59.267 50.000 0.00 0.00 0.00 5.69
4681 5758 0.029300 CTTCAAGTGTGTGTTGCCGG 59.971 55.000 0.00 0.00 0.00 6.13
4682 5759 0.393132 TTCAAGTGTGTGTTGCCGGA 60.393 50.000 5.05 0.00 0.00 5.14
4683 5760 0.813610 TCAAGTGTGTGTTGCCGGAG 60.814 55.000 5.05 0.00 0.00 4.63
4703 5780 2.373540 GCATCATTGCCAAGCTTTCA 57.626 45.000 0.00 0.00 43.38 2.69
4704 5781 1.997606 GCATCATTGCCAAGCTTTCAC 59.002 47.619 0.00 0.00 43.38 3.18
4705 5782 2.613691 CATCATTGCCAAGCTTTCACC 58.386 47.619 0.00 0.00 0.00 4.02
4706 5783 1.999648 TCATTGCCAAGCTTTCACCT 58.000 45.000 0.00 0.00 0.00 4.00
4707 5784 2.318908 TCATTGCCAAGCTTTCACCTT 58.681 42.857 0.00 0.00 0.00 3.50
4708 5785 2.297033 TCATTGCCAAGCTTTCACCTTC 59.703 45.455 0.00 0.00 0.00 3.46
4709 5786 0.667993 TTGCCAAGCTTTCACCTTCG 59.332 50.000 0.00 0.00 0.00 3.79
4710 5787 0.465460 TGCCAAGCTTTCACCTTCGT 60.465 50.000 0.00 0.00 0.00 3.85
4711 5788 0.040067 GCCAAGCTTTCACCTTCGTG 60.040 55.000 0.00 0.00 41.72 4.35
4712 5789 0.593128 CCAAGCTTTCACCTTCGTGG 59.407 55.000 0.00 0.00 40.65 4.94
4713 5790 1.593196 CAAGCTTTCACCTTCGTGGA 58.407 50.000 0.00 0.00 40.65 4.02
4714 5791 1.946768 CAAGCTTTCACCTTCGTGGAA 59.053 47.619 0.00 0.00 40.65 3.53
4715 5792 1.594331 AGCTTTCACCTTCGTGGAAC 58.406 50.000 4.38 0.00 40.65 3.62
4716 5793 1.134220 AGCTTTCACCTTCGTGGAACA 60.134 47.619 4.38 0.00 40.65 3.18
4717 5794 1.673920 GCTTTCACCTTCGTGGAACAA 59.326 47.619 4.38 0.00 44.16 2.83
4718 5795 2.293399 GCTTTCACCTTCGTGGAACAAT 59.707 45.455 4.38 0.00 44.16 2.71
4719 5796 3.243401 GCTTTCACCTTCGTGGAACAATT 60.243 43.478 4.38 0.00 44.16 2.32
4720 5797 4.736464 GCTTTCACCTTCGTGGAACAATTT 60.736 41.667 4.38 0.00 44.16 1.82
4721 5798 4.993029 TTCACCTTCGTGGAACAATTTT 57.007 36.364 4.38 0.00 44.16 1.82
4722 5799 4.300189 TCACCTTCGTGGAACAATTTTG 57.700 40.909 4.38 0.00 44.16 2.44
4723 5800 2.794350 CACCTTCGTGGAACAATTTTGC 59.206 45.455 4.38 0.00 44.16 3.68
4724 5801 2.693074 ACCTTCGTGGAACAATTTTGCT 59.307 40.909 4.38 0.00 44.16 3.91
4725 5802 3.886505 ACCTTCGTGGAACAATTTTGCTA 59.113 39.130 4.38 0.00 44.16 3.49
4726 5803 4.226761 CCTTCGTGGAACAATTTTGCTAC 58.773 43.478 0.00 0.00 44.16 3.58
4727 5804 4.023193 CCTTCGTGGAACAATTTTGCTACT 60.023 41.667 0.00 0.00 44.16 2.57
4728 5805 5.507315 CCTTCGTGGAACAATTTTGCTACTT 60.507 40.000 0.00 0.00 44.16 2.24
4729 5806 5.103290 TCGTGGAACAATTTTGCTACTTC 57.897 39.130 0.00 0.00 44.16 3.01
4730 5807 4.819630 TCGTGGAACAATTTTGCTACTTCT 59.180 37.500 0.00 0.00 44.16 2.85
4731 5808 5.049680 TCGTGGAACAATTTTGCTACTTCTC 60.050 40.000 0.00 0.00 44.16 2.87
4732 5809 5.049405 CGTGGAACAATTTTGCTACTTCTCT 60.049 40.000 0.00 0.00 44.16 3.10
4733 5810 6.145535 GTGGAACAATTTTGCTACTTCTCTG 58.854 40.000 0.00 0.00 44.16 3.35
4734 5811 6.017109 GTGGAACAATTTTGCTACTTCTCTGA 60.017 38.462 0.00 0.00 44.16 3.27
4735 5812 6.545666 TGGAACAATTTTGCTACTTCTCTGAA 59.454 34.615 0.00 0.00 31.92 3.02
4736 5813 7.068103 TGGAACAATTTTGCTACTTCTCTGAAA 59.932 33.333 0.00 0.00 31.92 2.69
4737 5814 7.379797 GGAACAATTTTGCTACTTCTCTGAAAC 59.620 37.037 0.00 0.00 0.00 2.78
4738 5815 7.333528 ACAATTTTGCTACTTCTCTGAAACA 57.666 32.000 0.00 0.00 0.00 2.83
4739 5816 7.196331 ACAATTTTGCTACTTCTCTGAAACAC 58.804 34.615 0.00 0.00 0.00 3.32
4740 5817 6.942532 ATTTTGCTACTTCTCTGAAACACA 57.057 33.333 0.00 0.00 0.00 3.72
4741 5818 6.751514 TTTTGCTACTTCTCTGAAACACAA 57.248 33.333 0.00 0.00 0.00 3.33
4742 5819 5.991328 TTGCTACTTCTCTGAAACACAAG 57.009 39.130 0.00 0.00 0.00 3.16
4743 5820 5.276461 TGCTACTTCTCTGAAACACAAGA 57.724 39.130 0.00 0.00 0.00 3.02
4744 5821 5.292765 TGCTACTTCTCTGAAACACAAGAG 58.707 41.667 0.00 0.00 0.00 2.85
4745 5822 5.069119 TGCTACTTCTCTGAAACACAAGAGA 59.931 40.000 0.00 0.00 34.00 3.10
4746 5823 5.404066 GCTACTTCTCTGAAACACAAGAGAC 59.596 44.000 1.96 0.00 34.83 3.36
4747 5824 5.344743 ACTTCTCTGAAACACAAGAGACA 57.655 39.130 1.96 0.00 34.83 3.41
4748 5825 5.923204 ACTTCTCTGAAACACAAGAGACAT 58.077 37.500 1.96 0.00 34.83 3.06
4749 5826 7.055667 ACTTCTCTGAAACACAAGAGACATA 57.944 36.000 1.96 0.00 34.83 2.29
4750 5827 7.500992 ACTTCTCTGAAACACAAGAGACATAA 58.499 34.615 1.96 0.00 34.83 1.90
4751 5828 7.655328 ACTTCTCTGAAACACAAGAGACATAAG 59.345 37.037 1.96 0.83 34.83 1.73
4752 5829 7.055667 TCTCTGAAACACAAGAGACATAAGT 57.944 36.000 0.00 0.00 32.34 2.24
4753 5830 7.500992 TCTCTGAAACACAAGAGACATAAGTT 58.499 34.615 0.00 0.00 32.34 2.66
4754 5831 7.987458 TCTCTGAAACACAAGAGACATAAGTTT 59.013 33.333 0.00 0.00 32.34 2.66
4755 5832 8.506168 TCTGAAACACAAGAGACATAAGTTTT 57.494 30.769 0.00 0.00 0.00 2.43
4756 5833 8.612619 TCTGAAACACAAGAGACATAAGTTTTC 58.387 33.333 0.00 0.00 0.00 2.29
4757 5834 8.506168 TGAAACACAAGAGACATAAGTTTTCT 57.494 30.769 0.00 0.00 0.00 2.52
4758 5835 8.397906 TGAAACACAAGAGACATAAGTTTTCTG 58.602 33.333 0.00 0.00 0.00 3.02
4759 5836 7.865706 AACACAAGAGACATAAGTTTTCTGT 57.134 32.000 0.00 0.00 0.00 3.41
4760 5837 7.865706 ACACAAGAGACATAAGTTTTCTGTT 57.134 32.000 0.00 0.00 0.00 3.16
4761 5838 8.281212 ACACAAGAGACATAAGTTTTCTGTTT 57.719 30.769 0.00 0.00 0.00 2.83
4762 5839 8.398665 ACACAAGAGACATAAGTTTTCTGTTTC 58.601 33.333 0.00 0.00 0.00 2.78
4763 5840 7.857885 CACAAGAGACATAAGTTTTCTGTTTCC 59.142 37.037 0.00 0.00 0.00 3.13
4764 5841 6.787085 AGAGACATAAGTTTTCTGTTTCCG 57.213 37.500 0.00 0.00 0.00 4.30
4765 5842 6.522054 AGAGACATAAGTTTTCTGTTTCCGA 58.478 36.000 0.00 0.00 0.00 4.55
4766 5843 7.162082 AGAGACATAAGTTTTCTGTTTCCGAT 58.838 34.615 0.00 0.00 0.00 4.18
4767 5844 7.332182 AGAGACATAAGTTTTCTGTTTCCGATC 59.668 37.037 0.00 0.00 0.00 3.69
4768 5845 6.934645 AGACATAAGTTTTCTGTTTCCGATCA 59.065 34.615 0.00 0.00 0.00 2.92
4769 5846 6.899114 ACATAAGTTTTCTGTTTCCGATCAC 58.101 36.000 0.00 0.00 0.00 3.06
4770 5847 6.485313 ACATAAGTTTTCTGTTTCCGATCACA 59.515 34.615 0.00 0.00 0.00 3.58
4771 5848 7.174946 ACATAAGTTTTCTGTTTCCGATCACAT 59.825 33.333 0.00 0.00 0.00 3.21
4772 5849 6.391227 AAGTTTTCTGTTTCCGATCACATT 57.609 33.333 0.00 0.00 0.00 2.71
4773 5850 5.762045 AGTTTTCTGTTTCCGATCACATTG 58.238 37.500 0.00 0.00 0.00 2.82
4774 5851 4.764679 TTTCTGTTTCCGATCACATTGG 57.235 40.909 0.00 0.00 34.94 3.16
4775 5852 3.417069 TCTGTTTCCGATCACATTGGT 57.583 42.857 0.00 0.00 35.20 3.67
4776 5853 4.545208 TCTGTTTCCGATCACATTGGTA 57.455 40.909 0.00 0.00 35.20 3.25
4777 5854 4.250464 TCTGTTTCCGATCACATTGGTAC 58.750 43.478 0.00 0.00 35.20 3.34
4778 5855 4.020573 TCTGTTTCCGATCACATTGGTACT 60.021 41.667 0.00 0.00 35.20 2.73
4779 5856 4.250464 TGTTTCCGATCACATTGGTACTC 58.750 43.478 0.00 0.00 35.20 2.59
4780 5857 4.020573 TGTTTCCGATCACATTGGTACTCT 60.021 41.667 0.00 0.00 35.20 3.24
4781 5858 4.819105 TTCCGATCACATTGGTACTCTT 57.181 40.909 0.00 0.00 35.20 2.85
4782 5859 4.123497 TCCGATCACATTGGTACTCTTG 57.877 45.455 0.00 0.00 35.20 3.02
4783 5860 3.767131 TCCGATCACATTGGTACTCTTGA 59.233 43.478 0.00 0.00 35.20 3.02
4784 5861 4.405680 TCCGATCACATTGGTACTCTTGAT 59.594 41.667 0.00 0.00 35.20 2.57
4785 5862 4.509230 CCGATCACATTGGTACTCTTGATG 59.491 45.833 0.00 0.00 0.00 3.07
4786 5863 5.111989 CGATCACATTGGTACTCTTGATGT 58.888 41.667 0.00 0.00 0.00 3.06
4787 5864 5.582269 CGATCACATTGGTACTCTTGATGTT 59.418 40.000 0.00 0.00 0.00 2.71
4788 5865 6.456047 CGATCACATTGGTACTCTTGATGTTG 60.456 42.308 0.00 0.00 0.00 3.33
4789 5866 5.863965 TCACATTGGTACTCTTGATGTTGA 58.136 37.500 0.00 0.00 0.00 3.18
4790 5867 6.295249 TCACATTGGTACTCTTGATGTTGAA 58.705 36.000 0.00 0.00 0.00 2.69
4791 5868 6.427853 TCACATTGGTACTCTTGATGTTGAAG 59.572 38.462 0.00 0.00 0.00 3.02
4792 5869 6.427853 CACATTGGTACTCTTGATGTTGAAGA 59.572 38.462 0.00 0.00 0.00 2.87
4794 5871 6.419484 TTGGTACTCTTGATGTTGAAGAGA 57.581 37.500 14.80 0.00 46.44 3.10
4795 5872 6.419484 TGGTACTCTTGATGTTGAAGAGAA 57.581 37.500 14.80 0.00 46.44 2.87
4796 5873 6.459066 TGGTACTCTTGATGTTGAAGAGAAG 58.541 40.000 14.80 0.00 46.44 2.85
4797 5874 5.872070 GGTACTCTTGATGTTGAAGAGAAGG 59.128 44.000 14.80 0.00 46.44 3.46
4798 5875 4.322567 ACTCTTGATGTTGAAGAGAAGGC 58.677 43.478 14.80 0.00 46.44 4.35
4799 5876 3.329386 TCTTGATGTTGAAGAGAAGGCG 58.671 45.455 0.00 0.00 0.00 5.52
4800 5877 3.006859 TCTTGATGTTGAAGAGAAGGCGA 59.993 43.478 0.00 0.00 0.00 5.54
4801 5878 2.964740 TGATGTTGAAGAGAAGGCGAG 58.035 47.619 0.00 0.00 0.00 5.03
4802 5879 2.562738 TGATGTTGAAGAGAAGGCGAGA 59.437 45.455 0.00 0.00 0.00 4.04
4803 5880 2.732412 TGTTGAAGAGAAGGCGAGAG 57.268 50.000 0.00 0.00 0.00 3.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.105964 TCAGCCGCTTGTACAGTTGT 59.894 50.000 0.00 0.00 0.00 3.32
1 2 0.792640 CTCAGCCGCTTGTACAGTTG 59.207 55.000 0.00 0.00 0.00 3.16
2 3 0.679505 TCTCAGCCGCTTGTACAGTT 59.320 50.000 0.00 0.00 0.00 3.16
3 4 0.244994 CTCTCAGCCGCTTGTACAGT 59.755 55.000 0.00 0.00 0.00 3.55
4 5 1.080995 GCTCTCAGCCGCTTGTACAG 61.081 60.000 0.00 0.00 34.48 2.74
6 7 0.670546 TTGCTCTCAGCCGCTTGTAC 60.671 55.000 0.00 0.00 41.51 2.90
7 8 0.670546 GTTGCTCTCAGCCGCTTGTA 60.671 55.000 0.00 0.00 41.51 2.41
8 9 1.963338 GTTGCTCTCAGCCGCTTGT 60.963 57.895 0.00 0.00 41.51 3.16
9 10 2.684843 GGTTGCTCTCAGCCGCTTG 61.685 63.158 0.00 0.00 41.51 4.01
10 11 2.359230 GGTTGCTCTCAGCCGCTT 60.359 61.111 0.00 0.00 41.51 4.68
14 15 2.593468 TATGCCGGTTGCTCTCAGCC 62.593 60.000 1.90 0.00 41.51 4.85
15 16 1.153369 TATGCCGGTTGCTCTCAGC 60.153 57.895 1.90 0.00 42.82 4.26
16 17 0.811616 GGTATGCCGGTTGCTCTCAG 60.812 60.000 1.90 0.00 42.00 3.35
17 18 1.220749 GGTATGCCGGTTGCTCTCA 59.779 57.895 1.90 0.00 42.00 3.27
18 19 1.523938 GGGTATGCCGGTTGCTCTC 60.524 63.158 1.90 0.00 42.00 3.20
19 20 2.590092 GGGTATGCCGGTTGCTCT 59.410 61.111 1.90 0.00 42.00 4.09
20 21 2.895372 CGGGTATGCCGGTTGCTC 60.895 66.667 1.90 0.00 42.00 4.26
21 22 3.675619 GACGGGTATGCCGGTTGCT 62.676 63.158 14.12 0.00 46.51 3.91
22 23 3.199891 GACGGGTATGCCGGTTGC 61.200 66.667 14.12 0.00 46.51 4.17
23 24 2.104253 GTGACGGGTATGCCGGTTG 61.104 63.158 14.12 0.00 46.51 3.77
24 25 2.266689 GTGACGGGTATGCCGGTT 59.733 61.111 14.12 0.00 46.51 4.44
26 27 4.884257 CCGTGACGGGTATGCCGG 62.884 72.222 17.80 5.83 44.15 6.13
36 37 1.086696 ATCAATTTGCTCCCGTGACG 58.913 50.000 0.00 0.00 0.00 4.35
37 38 2.415893 CCAATCAATTTGCTCCCGTGAC 60.416 50.000 0.00 0.00 33.73 3.67
38 39 1.818060 CCAATCAATTTGCTCCCGTGA 59.182 47.619 0.00 0.00 33.73 4.35
39 40 1.545582 ACCAATCAATTTGCTCCCGTG 59.454 47.619 0.00 0.00 33.73 4.94
40 41 1.818674 GACCAATCAATTTGCTCCCGT 59.181 47.619 0.00 0.00 33.73 5.28
41 42 1.202177 CGACCAATCAATTTGCTCCCG 60.202 52.381 0.00 0.00 33.73 5.14
42 43 1.134946 CCGACCAATCAATTTGCTCCC 59.865 52.381 0.00 0.00 33.73 4.30
43 44 2.091541 TCCGACCAATCAATTTGCTCC 58.908 47.619 0.00 0.00 33.73 4.70
44 45 2.476185 CGTCCGACCAATCAATTTGCTC 60.476 50.000 0.00 0.00 33.73 4.26
45 46 1.468520 CGTCCGACCAATCAATTTGCT 59.531 47.619 0.00 0.00 33.73 3.91
46 47 1.467374 CCGTCCGACCAATCAATTTGC 60.467 52.381 0.00 0.00 33.73 3.68
47 48 2.080693 TCCGTCCGACCAATCAATTTG 58.919 47.619 0.00 0.00 34.93 2.32
64 65 5.220154 GGACACGCGTATTTATTATGATCCG 60.220 44.000 13.44 0.00 0.00 4.18
69 70 5.900339 ACAGGACACGCGTATTTATTATG 57.100 39.130 13.44 5.70 0.00 1.90
70 71 5.235616 CCAACAGGACACGCGTATTTATTAT 59.764 40.000 13.44 0.00 0.00 1.28
77 87 1.079405 CCCAACAGGACACGCGTAT 60.079 57.895 13.44 0.00 38.24 3.06
82 92 2.908073 GCTTGCCCAACAGGACACG 61.908 63.158 0.00 0.00 38.24 4.49
100 110 1.930371 GCAAAGCACCCTTAGCAAACG 60.930 52.381 0.00 0.00 0.00 3.60
106 116 2.619013 CGAAAGCAAAGCACCCTTAG 57.381 50.000 0.00 0.00 0.00 2.18
157 167 1.590932 CGGAATCATGGCTTCAGAGG 58.409 55.000 10.00 0.00 0.00 3.69
182 350 1.289109 TTCGGCTTTCAGCTACGTGC 61.289 55.000 0.00 0.00 41.99 5.34
241 409 5.237127 GCGATGGAACTGATTGTGATTGATA 59.763 40.000 0.00 0.00 0.00 2.15
244 412 3.376234 AGCGATGGAACTGATTGTGATTG 59.624 43.478 0.00 0.00 0.00 2.67
245 413 3.376234 CAGCGATGGAACTGATTGTGATT 59.624 43.478 0.00 0.00 35.90 2.57
246 414 2.941064 CAGCGATGGAACTGATTGTGAT 59.059 45.455 0.00 0.00 35.90 3.06
247 415 2.349590 CAGCGATGGAACTGATTGTGA 58.650 47.619 0.00 0.00 35.90 3.58
248 416 1.202110 GCAGCGATGGAACTGATTGTG 60.202 52.381 1.46 0.00 35.90 3.33
249 417 1.089920 GCAGCGATGGAACTGATTGT 58.910 50.000 1.46 0.00 35.90 2.71
354 522 1.945662 CTTGCAGTTGCGGTTGTGC 60.946 57.895 0.00 0.00 45.83 4.57
393 561 0.326264 GTATGGCTAGGCTGATGGGG 59.674 60.000 18.18 0.00 0.00 4.96
396 564 1.610102 GCTGGTATGGCTAGGCTGATG 60.610 57.143 18.18 4.34 0.00 3.07
398 566 0.690744 TGCTGGTATGGCTAGGCTGA 60.691 55.000 18.18 2.07 0.00 4.26
400 568 0.181350 GTTGCTGGTATGGCTAGGCT 59.819 55.000 18.18 5.72 0.00 4.58
401 569 0.107214 TGTTGCTGGTATGGCTAGGC 60.107 55.000 9.85 9.85 0.00 3.93
402 570 2.017049 GTTGTTGCTGGTATGGCTAGG 58.983 52.381 0.00 0.00 0.00 3.02
403 571 2.679837 CTGTTGTTGCTGGTATGGCTAG 59.320 50.000 0.00 0.00 0.00 3.42
411 579 1.065491 TGACTGTCTGTTGTTGCTGGT 60.065 47.619 9.51 0.00 0.00 4.00
444 612 0.662619 TTTGCTGTGTACTGTGCTGC 59.337 50.000 0.00 0.00 0.00 5.25
510 678 1.601759 CCAGTCCCTGTGCTGTTGG 60.602 63.158 0.00 0.00 0.00 3.77
640 811 1.461075 CAGATGGGAGGGAGGGAGG 60.461 68.421 0.00 0.00 0.00 4.30
669 840 6.002082 CACATGAGAGATGAGAGAGAGAGAT 58.998 44.000 0.00 0.00 0.00 2.75
680 851 7.441458 CAGAATGATAAAGCACATGAGAGATGA 59.559 37.037 0.00 0.00 39.69 2.92
683 854 6.647229 ACAGAATGATAAAGCACATGAGAGA 58.353 36.000 0.00 0.00 39.69 3.10
684 855 6.922247 ACAGAATGATAAAGCACATGAGAG 57.078 37.500 0.00 0.00 39.69 3.20
685 856 6.880529 TCAACAGAATGATAAAGCACATGAGA 59.119 34.615 0.00 0.00 39.69 3.27
686 857 6.965500 GTCAACAGAATGATAAAGCACATGAG 59.035 38.462 0.00 0.00 39.69 2.90
687 858 6.430616 TGTCAACAGAATGATAAAGCACATGA 59.569 34.615 0.00 0.00 39.69 3.07
811 983 2.756207 TCATGCTTGGTGCTACGTACTA 59.244 45.455 0.00 0.00 43.37 1.82
812 984 1.548719 TCATGCTTGGTGCTACGTACT 59.451 47.619 0.00 0.00 43.37 2.73
813 985 2.004583 TCATGCTTGGTGCTACGTAC 57.995 50.000 0.00 0.00 43.37 3.67
1460 1779 0.861837 GAGTGCGACCACACAAAGAG 59.138 55.000 0.00 0.00 44.53 2.85
1553 1883 1.945387 ACTCCAATCAGCATAGCGTG 58.055 50.000 0.00 0.00 0.00 5.34
1555 1885 2.032550 CCAAACTCCAATCAGCATAGCG 59.967 50.000 0.00 0.00 0.00 4.26
1598 1928 0.679002 CCTGGCATCCACCTTGTCAG 60.679 60.000 0.00 0.00 44.52 3.51
1600 1930 1.379044 CCCTGGCATCCACCTTGTC 60.379 63.158 0.00 0.00 0.00 3.18
1650 1984 3.378427 GCCTTGCTTGTATCTAACTTGGG 59.622 47.826 0.00 0.00 0.00 4.12
1652 1986 7.559590 AATAGCCTTGCTTGTATCTAACTTG 57.440 36.000 0.00 0.00 40.44 3.16
1754 2088 7.232534 AGGCTGTTCTGGAATGTTGTAAATTAA 59.767 33.333 0.00 0.00 0.00 1.40
1858 2192 6.496911 ACCAGAAAAACATTTATAGCCAACCT 59.503 34.615 0.00 0.00 0.00 3.50
2059 2513 1.656095 GACATCTCGGCGTTCTTCTTG 59.344 52.381 6.85 0.00 0.00 3.02
2160 2617 4.758165 CCCTCGGTAACTTTTGCTTCTTTA 59.242 41.667 0.00 0.00 0.00 1.85
2291 2753 1.673168 GCTCTTCACCATAAGCCTGG 58.327 55.000 0.00 0.00 42.35 4.45
2329 2791 1.154225 CGGTTGTCTTGGCGAATGC 60.154 57.895 0.00 0.00 41.71 3.56
2522 2984 3.388676 CAGAGAGAGCAGGATGAAGGAAT 59.611 47.826 0.00 0.00 39.69 3.01
2644 3106 1.041447 ATTGGCATCAGCTTCAGGGC 61.041 55.000 0.00 0.00 41.70 5.19
2668 3130 2.092968 ACAACACTGCTGAGGTTCTTCA 60.093 45.455 0.00 0.00 0.00 3.02
2792 3254 1.293498 GGTGCTCGGTGACATGTCT 59.707 57.895 25.55 0.00 0.00 3.41
3263 3746 1.901650 CTTTCGAGTGCTTGTCGGCC 61.902 60.000 0.00 0.00 38.02 6.13
3614 4100 3.119096 GGCGGGCTGAACGAGAAC 61.119 66.667 0.00 0.00 0.00 3.01
3656 4142 1.677633 CGGATCAAAGGCCCGGTTT 60.678 57.895 0.00 0.00 39.59 3.27
3668 4154 2.893489 CTCCTCCATGTACATCGGATCA 59.107 50.000 20.41 12.59 0.00 2.92
3671 4157 2.748209 TCTCCTCCATGTACATCGGA 57.252 50.000 19.51 19.51 0.00 4.55
3814 4303 1.402259 CCAGCTCAGGACTACACTACG 59.598 57.143 0.00 0.00 0.00 3.51
3820 4315 3.553922 GCATGATACCAGCTCAGGACTAC 60.554 52.174 0.00 0.00 0.00 2.73
4086 4608 7.093945 GGCCACCAGAATTTCAGATTTTAGTTA 60.094 37.037 0.00 0.00 0.00 2.24
4106 4629 1.331214 CCATACATGAATGGGCCACC 58.669 55.000 9.28 4.25 42.41 4.61
4107 4630 0.675633 GCCATACATGAATGGGCCAC 59.324 55.000 9.28 0.00 45.63 5.01
4121 4644 2.833943 ACTCACATCACTCACAGCCATA 59.166 45.455 0.00 0.00 0.00 2.74
4135 4658 7.923414 GACTAAATTTTAGTCCCACTCACAT 57.077 36.000 27.84 3.47 38.33 3.21
4179 4702 5.499004 ACCTTATAAAGAGGTGCAACTCA 57.501 39.130 32.43 13.72 45.59 3.41
4234 4757 2.572284 GCGCGTGTAGGTCTCCTT 59.428 61.111 8.43 0.00 34.61 3.36
4261 4784 1.820056 TTGCGGCACCTTTCAACGA 60.820 52.632 0.05 0.00 0.00 3.85
4263 4786 0.031994 ATGTTGCGGCACCTTTCAAC 59.968 50.000 0.05 0.00 39.23 3.18
4264 4787 0.313672 GATGTTGCGGCACCTTTCAA 59.686 50.000 0.05 0.00 0.00 2.69
4265 4788 1.851021 CGATGTTGCGGCACCTTTCA 61.851 55.000 0.05 0.00 0.00 2.69
4266 4789 1.154225 CGATGTTGCGGCACCTTTC 60.154 57.895 0.05 0.00 0.00 2.62
4267 4790 0.604243 TACGATGTTGCGGCACCTTT 60.604 50.000 0.05 0.00 35.12 3.11
4268 4791 0.392461 ATACGATGTTGCGGCACCTT 60.392 50.000 0.05 0.00 35.12 3.50
4269 4792 1.089481 CATACGATGTTGCGGCACCT 61.089 55.000 0.05 0.00 35.12 4.00
4270 4793 1.351707 CATACGATGTTGCGGCACC 59.648 57.895 0.05 0.00 35.12 5.01
4271 4794 2.086510 ACATACGATGTTGCGGCAC 58.913 52.632 0.05 0.00 41.63 5.01
4272 4795 4.608032 ACATACGATGTTGCGGCA 57.392 50.000 0.00 0.00 41.63 5.69
4281 4804 3.818210 TGGAACAGTGCAAAACATACGAT 59.182 39.130 0.00 0.00 0.00 3.73
4282 4805 3.206964 TGGAACAGTGCAAAACATACGA 58.793 40.909 0.00 0.00 0.00 3.43
4297 5068 2.642311 TCTAGGGCACAAATCTGGAACA 59.358 45.455 0.00 0.00 0.00 3.18
4298 5069 3.350219 TCTAGGGCACAAATCTGGAAC 57.650 47.619 0.00 0.00 0.00 3.62
4357 5434 8.869897 TCATGACGACAATAACTGAGATTAAAC 58.130 33.333 0.00 0.00 0.00 2.01
4402 5479 9.339850 TGAGCTAATTACTACGAGATTTAGTCT 57.660 33.333 0.00 0.00 40.81 3.24
4423 5500 9.807649 GTTTTTGGATTGTTGAATATATGAGCT 57.192 29.630 0.00 0.00 0.00 4.09
4438 5515 7.479980 TCGCTTATAATCAGGTTTTTGGATTG 58.520 34.615 0.00 0.00 33.59 2.67
4450 5527 6.648310 ACAATGGAGTCATCGCTTATAATCAG 59.352 38.462 0.00 0.00 32.24 2.90
4455 5532 4.343814 TCCACAATGGAGTCATCGCTTATA 59.656 41.667 0.00 0.00 42.67 0.98
4459 5536 0.904649 TCCACAATGGAGTCATCGCT 59.095 50.000 0.00 0.00 42.67 4.93
4467 5544 7.010490 ACGACATATACGAATCCACAATGGAG 61.010 42.308 3.57 0.00 41.00 3.86
4468 5545 5.221362 ACGACATATACGAATCCACAATGGA 60.221 40.000 0.00 0.00 41.48 3.41
4469 5546 4.988540 ACGACATATACGAATCCACAATGG 59.011 41.667 8.17 0.00 35.19 3.16
4470 5547 6.525121 AACGACATATACGAATCCACAATG 57.475 37.500 8.17 0.00 34.70 2.82
4471 5548 6.759356 TCAAACGACATATACGAATCCACAAT 59.241 34.615 8.17 0.00 34.70 2.71
4472 5549 6.035220 GTCAAACGACATATACGAATCCACAA 59.965 38.462 8.17 0.00 33.34 3.33
4473 5550 5.517411 GTCAAACGACATATACGAATCCACA 59.483 40.000 8.17 0.00 33.34 4.17
4474 5551 5.517411 TGTCAAACGACATATACGAATCCAC 59.483 40.000 8.17 0.96 38.50 4.02
4475 5552 5.652518 TGTCAAACGACATATACGAATCCA 58.347 37.500 8.17 0.00 38.50 3.41
4476 5553 6.408428 GTTGTCAAACGACATATACGAATCC 58.592 40.000 8.17 0.00 42.85 3.01
4491 5568 3.963383 ATGTCCTTGTCGTTGTCAAAC 57.037 42.857 0.00 0.00 0.00 2.93
4492 5569 4.454161 CCATATGTCCTTGTCGTTGTCAAA 59.546 41.667 1.24 0.00 0.00 2.69
4493 5570 4.000325 CCATATGTCCTTGTCGTTGTCAA 59.000 43.478 1.24 0.00 0.00 3.18
4494 5571 3.595173 CCATATGTCCTTGTCGTTGTCA 58.405 45.455 1.24 0.00 0.00 3.58
4495 5572 2.936498 CCCATATGTCCTTGTCGTTGTC 59.064 50.000 1.24 0.00 0.00 3.18
4496 5573 2.939640 GCCCATATGTCCTTGTCGTTGT 60.940 50.000 1.24 0.00 0.00 3.32
4497 5574 1.670811 GCCCATATGTCCTTGTCGTTG 59.329 52.381 1.24 0.00 0.00 4.10
4498 5575 1.559682 AGCCCATATGTCCTTGTCGTT 59.440 47.619 1.24 0.00 0.00 3.85
4499 5576 1.134401 CAGCCCATATGTCCTTGTCGT 60.134 52.381 1.24 0.00 0.00 4.34
4500 5577 1.586422 CAGCCCATATGTCCTTGTCG 58.414 55.000 1.24 0.00 0.00 4.35
4501 5578 1.312815 GCAGCCCATATGTCCTTGTC 58.687 55.000 1.24 0.00 0.00 3.18
4502 5579 0.464373 CGCAGCCCATATGTCCTTGT 60.464 55.000 1.24 0.00 0.00 3.16
4503 5580 2.324215 CGCAGCCCATATGTCCTTG 58.676 57.895 1.24 0.00 0.00 3.61
4504 5581 4.885426 CGCAGCCCATATGTCCTT 57.115 55.556 1.24 0.00 0.00 3.36
4517 5594 1.926511 AATTTTGGCCTCGAGCGCAG 61.927 55.000 22.04 2.69 45.17 5.18
4518 5595 1.971167 AATTTTGGCCTCGAGCGCA 60.971 52.632 22.04 9.78 45.17 6.09
4519 5596 1.514873 CAATTTTGGCCTCGAGCGC 60.515 57.895 6.99 12.02 45.17 5.92
4520 5597 1.137404 CCAATTTTGGCCTCGAGCG 59.863 57.895 6.99 1.35 45.17 5.03
4530 5607 1.102978 CGTCCTAGGCCCCAATTTTG 58.897 55.000 2.96 0.00 0.00 2.44
4531 5608 0.683179 GCGTCCTAGGCCCCAATTTT 60.683 55.000 2.96 0.00 0.00 1.82
4532 5609 1.076995 GCGTCCTAGGCCCCAATTT 60.077 57.895 2.96 0.00 0.00 1.82
4533 5610 2.595655 GCGTCCTAGGCCCCAATT 59.404 61.111 2.96 0.00 0.00 2.32
4534 5611 3.489513 GGCGTCCTAGGCCCCAAT 61.490 66.667 2.96 0.00 42.98 3.16
4539 5616 4.208686 CTGTCGGCGTCCTAGGCC 62.209 72.222 6.85 0.00 45.15 5.19
4540 5617 3.450115 ACTGTCGGCGTCCTAGGC 61.450 66.667 6.85 0.00 0.00 3.93
4541 5618 1.994507 CTCACTGTCGGCGTCCTAGG 61.995 65.000 6.85 0.82 0.00 3.02
4542 5619 1.306642 ACTCACTGTCGGCGTCCTAG 61.307 60.000 6.85 3.91 0.00 3.02
4543 5620 0.892358 AACTCACTGTCGGCGTCCTA 60.892 55.000 6.85 0.00 0.00 2.94
4544 5621 2.201022 AACTCACTGTCGGCGTCCT 61.201 57.895 6.85 0.00 0.00 3.85
4545 5622 2.022129 CAACTCACTGTCGGCGTCC 61.022 63.158 6.85 0.00 0.00 4.79
4546 5623 0.039798 TACAACTCACTGTCGGCGTC 60.040 55.000 6.85 0.72 0.00 5.19
4547 5624 0.318445 GTACAACTCACTGTCGGCGT 60.318 55.000 6.85 0.00 0.00 5.68
4548 5625 1.334992 CGTACAACTCACTGTCGGCG 61.335 60.000 0.00 0.00 0.00 6.46
4549 5626 0.318445 ACGTACAACTCACTGTCGGC 60.318 55.000 0.00 0.00 0.00 5.54
4550 5627 1.002142 TGACGTACAACTCACTGTCGG 60.002 52.381 0.00 0.00 0.00 4.79
4551 5628 2.394545 TGACGTACAACTCACTGTCG 57.605 50.000 0.00 0.00 0.00 4.35
4552 5629 2.987149 CCATGACGTACAACTCACTGTC 59.013 50.000 0.00 0.00 0.00 3.51
4553 5630 2.626266 TCCATGACGTACAACTCACTGT 59.374 45.455 0.00 0.00 0.00 3.55
4554 5631 3.245797 CTCCATGACGTACAACTCACTG 58.754 50.000 0.00 0.00 0.00 3.66
4555 5632 2.352814 GCTCCATGACGTACAACTCACT 60.353 50.000 0.00 0.00 0.00 3.41
4556 5633 1.993370 GCTCCATGACGTACAACTCAC 59.007 52.381 0.00 0.00 0.00 3.51
4557 5634 1.616374 TGCTCCATGACGTACAACTCA 59.384 47.619 0.00 0.00 0.00 3.41
4558 5635 2.363788 TGCTCCATGACGTACAACTC 57.636 50.000 0.00 0.00 0.00 3.01
4559 5636 2.831685 TTGCTCCATGACGTACAACT 57.168 45.000 0.00 0.00 0.00 3.16
4560 5637 3.684788 AGAATTGCTCCATGACGTACAAC 59.315 43.478 0.00 0.00 0.00 3.32
4561 5638 3.937814 AGAATTGCTCCATGACGTACAA 58.062 40.909 0.00 0.00 0.00 2.41
4562 5639 3.610040 AGAATTGCTCCATGACGTACA 57.390 42.857 0.00 0.00 0.00 2.90
4563 5640 5.175856 GTCATAGAATTGCTCCATGACGTAC 59.824 44.000 0.00 0.00 37.02 3.67
4564 5641 5.069119 AGTCATAGAATTGCTCCATGACGTA 59.931 40.000 0.00 0.00 46.40 3.57
4565 5642 4.122776 GTCATAGAATTGCTCCATGACGT 58.877 43.478 0.00 0.00 37.02 4.34
4566 5643 4.375272 AGTCATAGAATTGCTCCATGACG 58.625 43.478 0.00 0.00 46.40 4.35
4567 5644 6.283694 TGTAGTCATAGAATTGCTCCATGAC 58.716 40.000 0.00 5.29 43.67 3.06
4568 5645 6.484364 TGTAGTCATAGAATTGCTCCATGA 57.516 37.500 0.00 0.00 0.00 3.07
4569 5646 6.988580 TCTTGTAGTCATAGAATTGCTCCATG 59.011 38.462 0.00 0.00 0.00 3.66
4570 5647 7.129457 TCTTGTAGTCATAGAATTGCTCCAT 57.871 36.000 0.00 0.00 0.00 3.41
4571 5648 6.544928 TCTTGTAGTCATAGAATTGCTCCA 57.455 37.500 0.00 0.00 0.00 3.86
4572 5649 7.170658 GTCATCTTGTAGTCATAGAATTGCTCC 59.829 40.741 0.00 0.00 0.00 4.70
4573 5650 7.925483 AGTCATCTTGTAGTCATAGAATTGCTC 59.075 37.037 0.00 0.00 0.00 4.26
4574 5651 7.710044 CAGTCATCTTGTAGTCATAGAATTGCT 59.290 37.037 0.00 0.00 0.00 3.91
4575 5652 7.708322 TCAGTCATCTTGTAGTCATAGAATTGC 59.292 37.037 0.00 0.00 0.00 3.56
4576 5653 9.761504 ATCAGTCATCTTGTAGTCATAGAATTG 57.238 33.333 0.00 0.00 0.00 2.32
4577 5654 9.761504 CATCAGTCATCTTGTAGTCATAGAATT 57.238 33.333 0.00 0.00 0.00 2.17
4578 5655 7.871973 GCATCAGTCATCTTGTAGTCATAGAAT 59.128 37.037 0.00 0.00 0.00 2.40
4579 5656 7.147846 TGCATCAGTCATCTTGTAGTCATAGAA 60.148 37.037 0.00 0.00 0.00 2.10
4580 5657 6.322201 TGCATCAGTCATCTTGTAGTCATAGA 59.678 38.462 0.00 0.00 0.00 1.98
4581 5658 6.420306 GTGCATCAGTCATCTTGTAGTCATAG 59.580 42.308 0.00 0.00 0.00 2.23
4582 5659 6.276091 GTGCATCAGTCATCTTGTAGTCATA 58.724 40.000 0.00 0.00 0.00 2.15
4583 5660 5.114780 GTGCATCAGTCATCTTGTAGTCAT 58.885 41.667 0.00 0.00 0.00 3.06
4584 5661 4.498241 GTGCATCAGTCATCTTGTAGTCA 58.502 43.478 0.00 0.00 0.00 3.41
4585 5662 3.549471 CGTGCATCAGTCATCTTGTAGTC 59.451 47.826 0.00 0.00 0.00 2.59
4586 5663 3.515630 CGTGCATCAGTCATCTTGTAGT 58.484 45.455 0.00 0.00 0.00 2.73
4587 5664 2.283617 GCGTGCATCAGTCATCTTGTAG 59.716 50.000 0.00 0.00 0.00 2.74
4588 5665 2.094026 AGCGTGCATCAGTCATCTTGTA 60.094 45.455 0.00 0.00 0.00 2.41
4589 5666 1.081892 GCGTGCATCAGTCATCTTGT 58.918 50.000 0.00 0.00 0.00 3.16
4590 5667 1.326852 GAGCGTGCATCAGTCATCTTG 59.673 52.381 0.00 0.00 0.00 3.02
4591 5668 1.206610 AGAGCGTGCATCAGTCATCTT 59.793 47.619 0.00 0.00 0.00 2.40
4592 5669 0.822811 AGAGCGTGCATCAGTCATCT 59.177 50.000 0.00 0.00 0.00 2.90
4593 5670 0.928922 CAGAGCGTGCATCAGTCATC 59.071 55.000 0.00 0.00 0.00 2.92
4594 5671 0.248565 ACAGAGCGTGCATCAGTCAT 59.751 50.000 0.00 0.00 0.00 3.06
4595 5672 0.033920 AACAGAGCGTGCATCAGTCA 59.966 50.000 0.00 0.00 0.00 3.41
4596 5673 0.441533 CAACAGAGCGTGCATCAGTC 59.558 55.000 0.00 0.00 0.00 3.51
4597 5674 0.250038 ACAACAGAGCGTGCATCAGT 60.250 50.000 0.00 0.00 0.00 3.41
4598 5675 0.870393 AACAACAGAGCGTGCATCAG 59.130 50.000 0.00 0.00 0.00 2.90
4599 5676 0.867746 GAACAACAGAGCGTGCATCA 59.132 50.000 0.00 0.00 0.00 3.07
4600 5677 0.867746 TGAACAACAGAGCGTGCATC 59.132 50.000 0.00 0.00 0.00 3.91
4601 5678 3.005205 TGAACAACAGAGCGTGCAT 57.995 47.368 0.00 0.00 0.00 3.96
4602 5679 4.530581 TGAACAACAGAGCGTGCA 57.469 50.000 0.00 0.00 0.00 4.57
4611 5688 2.486592 CTCATGAGCATGCTGAACAACA 59.513 45.455 28.27 16.18 38.65 3.33
4612 5689 2.745821 TCTCATGAGCATGCTGAACAAC 59.254 45.455 28.27 10.14 38.65 3.32
4613 5690 3.062122 TCTCATGAGCATGCTGAACAA 57.938 42.857 28.27 5.60 38.65 2.83
4614 5691 2.773993 TCTCATGAGCATGCTGAACA 57.226 45.000 28.27 17.81 38.65 3.18
4615 5692 4.124970 TGTATCTCATGAGCATGCTGAAC 58.875 43.478 28.27 11.32 38.65 3.18
4616 5693 4.141779 ACTGTATCTCATGAGCATGCTGAA 60.142 41.667 28.27 13.96 38.65 3.02
4617 5694 3.387050 ACTGTATCTCATGAGCATGCTGA 59.613 43.478 28.27 19.30 38.65 4.26
4618 5695 3.729966 ACTGTATCTCATGAGCATGCTG 58.270 45.455 28.27 12.46 38.65 4.41
4619 5696 3.552478 CGACTGTATCTCATGAGCATGCT 60.552 47.826 22.92 22.92 38.65 3.79
4620 5697 2.730404 CGACTGTATCTCATGAGCATGC 59.270 50.000 18.36 10.51 38.65 4.06
4621 5698 2.730404 GCGACTGTATCTCATGAGCATG 59.270 50.000 18.36 4.10 40.09 4.06
4622 5699 2.627221 AGCGACTGTATCTCATGAGCAT 59.373 45.455 18.36 13.94 0.00 3.79
4623 5700 2.027385 AGCGACTGTATCTCATGAGCA 58.973 47.619 18.36 9.40 0.00 4.26
4624 5701 2.660490 GAGCGACTGTATCTCATGAGC 58.340 52.381 18.36 4.87 0.00 4.26
4625 5702 2.914861 CGAGCGACTGTATCTCATGAG 58.085 52.381 17.07 17.07 0.00 2.90
4626 5703 1.002359 GCGAGCGACTGTATCTCATGA 60.002 52.381 0.00 0.00 0.00 3.07
4627 5704 1.268743 TGCGAGCGACTGTATCTCATG 60.269 52.381 8.76 0.00 0.00 3.07
4628 5705 1.025041 TGCGAGCGACTGTATCTCAT 58.975 50.000 8.76 0.00 0.00 2.90
4629 5706 0.808755 TTGCGAGCGACTGTATCTCA 59.191 50.000 8.76 0.00 0.00 3.27
4630 5707 1.849219 CTTTGCGAGCGACTGTATCTC 59.151 52.381 0.00 0.27 0.00 2.75
4631 5708 1.469940 CCTTTGCGAGCGACTGTATCT 60.470 52.381 0.00 0.00 0.00 1.98
4632 5709 0.924090 CCTTTGCGAGCGACTGTATC 59.076 55.000 0.00 0.00 0.00 2.24
4633 5710 0.530744 TCCTTTGCGAGCGACTGTAT 59.469 50.000 0.00 0.00 0.00 2.29
4634 5711 0.315886 TTCCTTTGCGAGCGACTGTA 59.684 50.000 0.00 0.00 0.00 2.74
4635 5712 1.069090 TTCCTTTGCGAGCGACTGT 59.931 52.632 0.00 0.00 0.00 3.55
4636 5713 0.946221 AGTTCCTTTGCGAGCGACTG 60.946 55.000 0.00 0.00 0.00 3.51
4637 5714 0.249911 AAGTTCCTTTGCGAGCGACT 60.250 50.000 0.00 0.00 0.00 4.18
4638 5715 0.110644 CAAGTTCCTTTGCGAGCGAC 60.111 55.000 0.00 0.00 0.00 5.19
4639 5716 0.249699 TCAAGTTCCTTTGCGAGCGA 60.250 50.000 0.00 0.00 0.00 4.93
4640 5717 0.164647 CTCAAGTTCCTTTGCGAGCG 59.835 55.000 0.00 0.00 0.00 5.03
4641 5718 1.230324 ACTCAAGTTCCTTTGCGAGC 58.770 50.000 0.00 0.00 0.00 5.03
4642 5719 3.654414 AGTACTCAAGTTCCTTTGCGAG 58.346 45.455 0.00 0.00 0.00 5.03
4643 5720 3.746045 AGTACTCAAGTTCCTTTGCGA 57.254 42.857 0.00 0.00 0.00 5.10
4644 5721 3.807622 TGAAGTACTCAAGTTCCTTTGCG 59.192 43.478 0.00 0.00 36.80 4.85
4645 5722 5.751243 TTGAAGTACTCAAGTTCCTTTGC 57.249 39.130 0.00 0.00 39.20 3.68
4655 5732 4.094294 GCAACACACACTTGAAGTACTCAA 59.906 41.667 0.00 1.82 41.93 3.02
4656 5733 3.621268 GCAACACACACTTGAAGTACTCA 59.379 43.478 0.00 0.00 0.00 3.41
4657 5734 3.002348 GGCAACACACACTTGAAGTACTC 59.998 47.826 0.00 0.00 0.00 2.59
4658 5735 2.943033 GGCAACACACACTTGAAGTACT 59.057 45.455 0.00 0.00 0.00 2.73
4659 5736 2.286184 CGGCAACACACACTTGAAGTAC 60.286 50.000 0.00 0.00 0.00 2.73
4660 5737 1.937223 CGGCAACACACACTTGAAGTA 59.063 47.619 0.00 0.00 0.00 2.24
4661 5738 0.732571 CGGCAACACACACTTGAAGT 59.267 50.000 0.00 0.00 0.00 3.01
4662 5739 0.029300 CCGGCAACACACACTTGAAG 59.971 55.000 0.00 0.00 0.00 3.02
4663 5740 0.393132 TCCGGCAACACACACTTGAA 60.393 50.000 0.00 0.00 0.00 2.69
4664 5741 0.813610 CTCCGGCAACACACACTTGA 60.814 55.000 0.00 0.00 0.00 3.02
4665 5742 1.648720 CTCCGGCAACACACACTTG 59.351 57.895 0.00 0.00 0.00 3.16
4666 5743 1.525995 CCTCCGGCAACACACACTT 60.526 57.895 0.00 0.00 0.00 3.16
4667 5744 2.111043 CCTCCGGCAACACACACT 59.889 61.111 0.00 0.00 0.00 3.55
4684 5761 5.485040 AGGTGAAAGCTTGGCAATGATGC 62.485 47.826 0.00 0.00 46.63 3.91
4685 5762 2.232941 AGGTGAAAGCTTGGCAATGATG 59.767 45.455 0.00 0.00 46.63 3.07
4686 5763 2.532843 AGGTGAAAGCTTGGCAATGAT 58.467 42.857 0.00 0.00 46.63 2.45
4687 5764 1.999648 AGGTGAAAGCTTGGCAATGA 58.000 45.000 0.00 0.00 46.63 2.57
4702 5779 2.794350 GCAAAATTGTTCCACGAAGGTG 59.206 45.455 0.00 0.00 43.99 4.00
4703 5780 2.693074 AGCAAAATTGTTCCACGAAGGT 59.307 40.909 0.00 0.00 39.02 3.50
4704 5781 3.369546 AGCAAAATTGTTCCACGAAGG 57.630 42.857 0.00 0.00 39.47 3.46
4705 5782 5.108385 AGTAGCAAAATTGTTCCACGAAG 57.892 39.130 0.00 0.00 0.00 3.79
4706 5783 5.298276 AGAAGTAGCAAAATTGTTCCACGAA 59.702 36.000 0.00 0.00 0.00 3.85
4707 5784 4.819630 AGAAGTAGCAAAATTGTTCCACGA 59.180 37.500 0.00 0.00 0.00 4.35
4708 5785 5.049405 AGAGAAGTAGCAAAATTGTTCCACG 60.049 40.000 0.00 0.00 0.00 4.94
4709 5786 6.017109 TCAGAGAAGTAGCAAAATTGTTCCAC 60.017 38.462 0.00 0.00 0.00 4.02
4710 5787 6.061441 TCAGAGAAGTAGCAAAATTGTTCCA 58.939 36.000 0.00 0.00 0.00 3.53
4711 5788 6.560253 TCAGAGAAGTAGCAAAATTGTTCC 57.440 37.500 0.00 0.00 0.00 3.62
4712 5789 7.915397 TGTTTCAGAGAAGTAGCAAAATTGTTC 59.085 33.333 0.00 0.00 0.00 3.18
4713 5790 7.702348 GTGTTTCAGAGAAGTAGCAAAATTGTT 59.298 33.333 0.00 0.00 0.00 2.83
4714 5791 7.148086 TGTGTTTCAGAGAAGTAGCAAAATTGT 60.148 33.333 0.00 0.00 0.00 2.71
4715 5792 7.195646 TGTGTTTCAGAGAAGTAGCAAAATTG 58.804 34.615 0.00 0.00 0.00 2.32
4716 5793 7.333528 TGTGTTTCAGAGAAGTAGCAAAATT 57.666 32.000 0.00 0.00 0.00 1.82
4717 5794 6.942532 TGTGTTTCAGAGAAGTAGCAAAAT 57.057 33.333 0.00 0.00 0.00 1.82
4718 5795 6.597672 TCTTGTGTTTCAGAGAAGTAGCAAAA 59.402 34.615 0.00 0.00 0.00 2.44
4719 5796 6.112734 TCTTGTGTTTCAGAGAAGTAGCAAA 58.887 36.000 0.00 0.00 0.00 3.68
4720 5797 5.670485 TCTTGTGTTTCAGAGAAGTAGCAA 58.330 37.500 0.00 0.00 0.00 3.91
4721 5798 5.069119 TCTCTTGTGTTTCAGAGAAGTAGCA 59.931 40.000 0.00 0.00 34.87 3.49
4722 5799 5.404066 GTCTCTTGTGTTTCAGAGAAGTAGC 59.596 44.000 0.46 0.00 38.87 3.58
4723 5800 6.507900 TGTCTCTTGTGTTTCAGAGAAGTAG 58.492 40.000 0.46 0.00 38.87 2.57
4724 5801 6.465439 TGTCTCTTGTGTTTCAGAGAAGTA 57.535 37.500 0.46 0.00 38.87 2.24
4725 5802 5.344743 TGTCTCTTGTGTTTCAGAGAAGT 57.655 39.130 0.46 0.00 38.87 3.01
4726 5803 7.655328 ACTTATGTCTCTTGTGTTTCAGAGAAG 59.345 37.037 0.46 0.00 38.87 2.85
4727 5804 7.500992 ACTTATGTCTCTTGTGTTTCAGAGAA 58.499 34.615 0.46 0.00 38.87 2.87
4728 5805 7.055667 ACTTATGTCTCTTGTGTTTCAGAGA 57.944 36.000 0.00 0.00 35.35 3.10
4729 5806 7.721286 AACTTATGTCTCTTGTGTTTCAGAG 57.279 36.000 0.00 0.00 0.00 3.35
4730 5807 8.506168 AAAACTTATGTCTCTTGTGTTTCAGA 57.494 30.769 0.00 0.00 0.00 3.27
4731 5808 8.616076 AGAAAACTTATGTCTCTTGTGTTTCAG 58.384 33.333 0.00 0.00 0.00 3.02
4732 5809 8.397906 CAGAAAACTTATGTCTCTTGTGTTTCA 58.602 33.333 0.00 0.00 0.00 2.69
4733 5810 8.398665 ACAGAAAACTTATGTCTCTTGTGTTTC 58.601 33.333 0.00 0.00 0.00 2.78
4734 5811 8.281212 ACAGAAAACTTATGTCTCTTGTGTTT 57.719 30.769 0.00 0.00 0.00 2.83
4735 5812 7.865706 ACAGAAAACTTATGTCTCTTGTGTT 57.134 32.000 0.00 0.00 0.00 3.32
4736 5813 7.865706 AACAGAAAACTTATGTCTCTTGTGT 57.134 32.000 0.00 0.00 0.00 3.72
4737 5814 7.857885 GGAAACAGAAAACTTATGTCTCTTGTG 59.142 37.037 0.00 0.00 0.00 3.33
4738 5815 7.254795 CGGAAACAGAAAACTTATGTCTCTTGT 60.255 37.037 0.00 0.00 0.00 3.16
4739 5816 7.042051 TCGGAAACAGAAAACTTATGTCTCTTG 60.042 37.037 0.00 0.00 0.00 3.02
4740 5817 6.990349 TCGGAAACAGAAAACTTATGTCTCTT 59.010 34.615 0.00 0.00 0.00 2.85
4741 5818 6.522054 TCGGAAACAGAAAACTTATGTCTCT 58.478 36.000 0.00 0.00 0.00 3.10
4742 5819 6.780706 TCGGAAACAGAAAACTTATGTCTC 57.219 37.500 0.00 0.00 0.00 3.36
4743 5820 6.934645 TGATCGGAAACAGAAAACTTATGTCT 59.065 34.615 0.00 0.00 0.00 3.41
4744 5821 7.015877 GTGATCGGAAACAGAAAACTTATGTC 58.984 38.462 0.00 0.00 0.00 3.06
4745 5822 6.485313 TGTGATCGGAAACAGAAAACTTATGT 59.515 34.615 0.00 0.00 0.00 2.29
4746 5823 6.898041 TGTGATCGGAAACAGAAAACTTATG 58.102 36.000 0.00 0.00 0.00 1.90
4747 5824 7.687941 ATGTGATCGGAAACAGAAAACTTAT 57.312 32.000 3.70 0.00 0.00 1.73
4748 5825 7.359595 CAATGTGATCGGAAACAGAAAACTTA 58.640 34.615 3.70 0.00 0.00 2.24
4749 5826 6.208644 CAATGTGATCGGAAACAGAAAACTT 58.791 36.000 3.70 0.00 0.00 2.66
4750 5827 5.278463 CCAATGTGATCGGAAACAGAAAACT 60.278 40.000 3.70 0.00 0.00 2.66
4751 5828 4.917415 CCAATGTGATCGGAAACAGAAAAC 59.083 41.667 3.70 0.00 0.00 2.43
4752 5829 4.582656 ACCAATGTGATCGGAAACAGAAAA 59.417 37.500 3.70 0.00 0.00 2.29
4753 5830 4.141287 ACCAATGTGATCGGAAACAGAAA 58.859 39.130 3.70 0.00 0.00 2.52
4754 5831 3.750371 ACCAATGTGATCGGAAACAGAA 58.250 40.909 3.70 0.00 0.00 3.02
4755 5832 3.417069 ACCAATGTGATCGGAAACAGA 57.583 42.857 3.70 0.00 0.00 3.41
4756 5833 4.253685 AGTACCAATGTGATCGGAAACAG 58.746 43.478 3.70 0.00 0.00 3.16
4757 5834 4.020573 AGAGTACCAATGTGATCGGAAACA 60.021 41.667 0.00 0.12 0.00 2.83
4758 5835 4.504858 AGAGTACCAATGTGATCGGAAAC 58.495 43.478 0.00 0.00 0.00 2.78
4759 5836 4.819105 AGAGTACCAATGTGATCGGAAA 57.181 40.909 0.00 0.00 0.00 3.13
4760 5837 4.221924 TCAAGAGTACCAATGTGATCGGAA 59.778 41.667 0.00 0.00 0.00 4.30
4761 5838 3.767131 TCAAGAGTACCAATGTGATCGGA 59.233 43.478 0.00 0.00 0.00 4.55
4762 5839 4.123497 TCAAGAGTACCAATGTGATCGG 57.877 45.455 0.00 0.00 0.00 4.18
4763 5840 5.111989 ACATCAAGAGTACCAATGTGATCG 58.888 41.667 0.00 0.00 0.00 3.69
4764 5841 6.595326 TCAACATCAAGAGTACCAATGTGATC 59.405 38.462 0.00 0.00 31.29 2.92
4765 5842 6.475504 TCAACATCAAGAGTACCAATGTGAT 58.524 36.000 0.00 0.00 31.29 3.06
4766 5843 5.863965 TCAACATCAAGAGTACCAATGTGA 58.136 37.500 0.00 0.00 31.29 3.58
4767 5844 6.427853 TCTTCAACATCAAGAGTACCAATGTG 59.572 38.462 0.00 0.00 31.29 3.21
4768 5845 6.533730 TCTTCAACATCAAGAGTACCAATGT 58.466 36.000 0.00 0.00 32.15 2.71
4769 5846 6.875726 TCTCTTCAACATCAAGAGTACCAATG 59.124 38.462 8.84 0.00 44.99 2.82
4770 5847 7.009179 TCTCTTCAACATCAAGAGTACCAAT 57.991 36.000 8.84 0.00 44.99 3.16
4771 5848 6.419484 TCTCTTCAACATCAAGAGTACCAA 57.581 37.500 8.84 0.00 44.99 3.67
4772 5849 6.419484 TTCTCTTCAACATCAAGAGTACCA 57.581 37.500 8.84 0.00 44.99 3.25
4773 5850 5.872070 CCTTCTCTTCAACATCAAGAGTACC 59.128 44.000 8.84 0.00 44.99 3.34
4774 5851 5.350091 GCCTTCTCTTCAACATCAAGAGTAC 59.650 44.000 8.84 0.00 44.99 2.73
4775 5852 5.482908 GCCTTCTCTTCAACATCAAGAGTA 58.517 41.667 8.84 0.20 44.99 2.59
4776 5853 4.322567 GCCTTCTCTTCAACATCAAGAGT 58.677 43.478 8.84 0.00 44.99 3.24
4777 5854 3.370366 CGCCTTCTCTTCAACATCAAGAG 59.630 47.826 3.46 3.46 45.77 2.85
4778 5855 3.006859 TCGCCTTCTCTTCAACATCAAGA 59.993 43.478 0.00 0.00 0.00 3.02
4779 5856 3.329386 TCGCCTTCTCTTCAACATCAAG 58.671 45.455 0.00 0.00 0.00 3.02
4780 5857 3.006859 TCTCGCCTTCTCTTCAACATCAA 59.993 43.478 0.00 0.00 0.00 2.57
4781 5858 2.562738 TCTCGCCTTCTCTTCAACATCA 59.437 45.455 0.00 0.00 0.00 3.07
4782 5859 3.186119 CTCTCGCCTTCTCTTCAACATC 58.814 50.000 0.00 0.00 0.00 3.06
4783 5860 2.676463 GCTCTCGCCTTCTCTTCAACAT 60.676 50.000 0.00 0.00 0.00 2.71
4784 5861 1.337260 GCTCTCGCCTTCTCTTCAACA 60.337 52.381 0.00 0.00 0.00 3.33
4785 5862 1.337260 TGCTCTCGCCTTCTCTTCAAC 60.337 52.381 0.00 0.00 34.43 3.18
4786 5863 0.969149 TGCTCTCGCCTTCTCTTCAA 59.031 50.000 0.00 0.00 34.43 2.69
4787 5864 0.969149 TTGCTCTCGCCTTCTCTTCA 59.031 50.000 0.00 0.00 34.43 3.02
4788 5865 2.086054 TTTGCTCTCGCCTTCTCTTC 57.914 50.000 0.00 0.00 34.43 2.87
4789 5866 2.421619 CTTTTGCTCTCGCCTTCTCTT 58.578 47.619 0.00 0.00 34.43 2.85
4790 5867 2.091852 CTTTTGCTCTCGCCTTCTCT 57.908 50.000 0.00 0.00 34.43 3.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.