Multiple sequence alignment - TraesCS7D01G240600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G240600 chr7D 100.000 4975 0 0 1 4975 205130726 205135700 0.000000e+00 9188.0
1 TraesCS7D01G240600 chr7D 84.971 1211 131 35 1346 2529 83063539 83064725 0.000000e+00 1181.0
2 TraesCS7D01G240600 chr7D 92.415 646 47 2 1346 1990 82899315 82899959 0.000000e+00 920.0
3 TraesCS7D01G240600 chr7D 83.855 991 135 17 996 1985 582304005 582303039 0.000000e+00 920.0
4 TraesCS7D01G240600 chr7D 82.002 939 106 41 2043 2966 82901808 82902698 0.000000e+00 739.0
5 TraesCS7D01G240600 chr7D 85.027 374 42 10 2615 2978 582302580 582302211 7.870000e-98 368.0
6 TraesCS7D01G240600 chr7D 89.513 267 17 5 974 1240 82898997 82899252 1.340000e-85 327.0
7 TraesCS7D01G240600 chr7D 84.643 280 31 5 409 677 265002572 265002294 8.210000e-68 268.0
8 TraesCS7D01G240600 chr7D 91.608 143 12 0 2609 2751 83064826 83064968 1.090000e-46 198.0
9 TraesCS7D01G240600 chr7D 90.210 143 14 0 3838 3980 582302188 582302046 2.360000e-43 187.0
10 TraesCS7D01G240600 chr7D 74.908 271 44 15 421 675 41857333 41857071 8.810000e-18 102.0
11 TraesCS7D01G240600 chr7D 89.831 59 2 4 3550 3605 205134235 205134292 6.910000e-09 73.1
12 TraesCS7D01G240600 chr7D 89.831 59 2 4 3510 3567 205134275 205134330 6.910000e-09 73.1
13 TraesCS7D01G240600 chr7D 97.222 36 1 0 2110 2145 35560283 35560318 1.500000e-05 62.1
14 TraesCS7D01G240600 chr7B 93.656 2979 125 32 674 3618 169432695 169435643 0.000000e+00 4396.0
15 TraesCS7D01G240600 chr7B 84.514 988 125 13 999 1985 650130060 650129100 0.000000e+00 952.0
16 TraesCS7D01G240600 chr7B 92.756 635 46 0 1346 1980 32330805 32331439 0.000000e+00 918.0
17 TraesCS7D01G240600 chr7B 92.356 641 49 0 1346 1986 32344796 32345436 0.000000e+00 913.0
18 TraesCS7D01G240600 chr7B 91.654 635 53 0 1346 1980 32408645 32409279 0.000000e+00 880.0
19 TraesCS7D01G240600 chr7B 90.818 599 37 16 3510 4101 169435575 169436162 0.000000e+00 785.0
20 TraesCS7D01G240600 chr7B 81.770 757 84 40 2027 2751 32331520 32332254 7.180000e-163 584.0
21 TraesCS7D01G240600 chr7B 93.316 389 19 6 1 387 169432314 169432697 7.230000e-158 568.0
22 TraesCS7D01G240600 chr7B 86.104 403 42 11 4538 4932 169461865 169462261 5.950000e-114 422.0
23 TraesCS7D01G240600 chr7B 83.370 451 50 18 2080 2520 32409354 32409789 1.300000e-105 394.0
24 TraesCS7D01G240600 chr7B 94.141 256 9 3 4100 4350 169436201 169436455 7.810000e-103 385.0
25 TraesCS7D01G240600 chr7B 89.888 267 18 4 974 1240 32330481 32330738 7.980000e-88 335.0
26 TraesCS7D01G240600 chr7B 87.640 267 24 4 975 1241 32408321 32408578 8.090000e-78 302.0
27 TraesCS7D01G240600 chr7B 84.951 206 19 7 2561 2764 32410302 32410497 1.090000e-46 198.0
28 TraesCS7D01G240600 chr7B 91.525 59 5 0 2684 2742 32354418 32354476 1.150000e-11 82.4
29 TraesCS7D01G240600 chr7B 97.500 40 1 0 4363 4402 169436450 169436489 8.940000e-08 69.4
30 TraesCS7D01G240600 chr7A 93.431 2938 132 32 721 3618 217202367 217205283 0.000000e+00 4300.0
31 TraesCS7D01G240600 chr7A 90.902 1242 84 21 3510 4734 217205215 217206444 0.000000e+00 1640.0
32 TraesCS7D01G240600 chr7A 83.925 1661 190 48 1346 2980 84854955 84856564 0.000000e+00 1517.0
33 TraesCS7D01G240600 chr7A 84.267 1214 129 41 1346 2523 85031192 85032379 0.000000e+00 1127.0
34 TraesCS7D01G240600 chr7A 84.939 976 120 24 1018 1990 674275164 674274213 0.000000e+00 963.0
35 TraesCS7D01G240600 chr7A 86.479 355 36 9 2615 2961 674273774 674273424 3.630000e-101 379.0
36 TraesCS7D01G240600 chr7A 89.513 267 19 4 974 1240 84854635 84854892 3.710000e-86 329.0
37 TraesCS7D01G240600 chr7A 86.891 267 25 3 421 678 717840037 717839772 1.750000e-74 291.0
38 TraesCS7D01G240600 chr7A 85.978 271 28 3 420 682 35704162 35703894 1.050000e-71 281.0
39 TraesCS7D01G240600 chr7A 85.768 267 27 4 421 678 336728603 336728867 6.350000e-69 272.0
40 TraesCS7D01G240600 chr2B 90.074 675 63 4 1316 1987 792124396 792123723 0.000000e+00 872.0
41 TraesCS7D01G240600 chr2B 82.118 850 116 21 2259 3083 792123449 792122611 0.000000e+00 695.0
42 TraesCS7D01G240600 chr2B 86.742 264 25 3 421 675 450718232 450718494 8.150000e-73 285.0
43 TraesCS7D01G240600 chr2B 94.545 55 3 0 624 678 410181239 410181293 8.870000e-13 86.1
44 TraesCS7D01G240600 chr2B 83.607 61 7 3 4372 4431 558037932 558037990 3.000000e-03 54.7
45 TraesCS7D01G240600 chr5A 89.734 263 17 4 421 675 177623687 177623947 1.340000e-85 327.0
46 TraesCS7D01G240600 chr5A 85.971 278 26 5 410 675 596587288 596587564 8.150000e-73 285.0
47 TraesCS7D01G240600 chr5A 86.415 265 28 1 421 677 523613862 523613598 2.930000e-72 283.0
48 TraesCS7D01G240600 chr5A 76.208 269 44 13 421 675 573104514 573104776 1.880000e-24 124.0
49 TraesCS7D01G240600 chr5A 76.190 273 43 14 418 675 631470028 631470293 1.880000e-24 124.0
50 TraesCS7D01G240600 chr1D 88.931 262 22 1 421 675 339743482 339743221 2.890000e-82 316.0
51 TraesCS7D01G240600 chr3A 86.940 268 25 3 418 676 101441632 101441898 4.870000e-75 292.0
52 TraesCS7D01G240600 chr3A 74.349 269 49 13 421 675 729748184 729748446 4.100000e-16 97.1
53 TraesCS7D01G240600 chr2A 86.567 268 26 3 417 675 45076141 45075875 2.270000e-73 287.0
54 TraesCS7D01G240600 chr2A 85.660 265 30 4 421 677 141240042 141239778 6.350000e-69 272.0
55 TraesCS7D01G240600 chr2A 83.969 262 34 5 421 675 12743313 12743053 1.380000e-60 244.0
56 TraesCS7D01G240600 chr1A 86.692 263 27 1 421 675 521229410 521229672 8.150000e-73 285.0
57 TraesCS7D01G240600 chr1B 84.444 270 30 5 421 680 632029166 632028899 6.390000e-64 255.0
58 TraesCS7D01G240600 chr5B 84.270 267 31 4 421 678 437912267 437912003 2.970000e-62 250.0
59 TraesCS7D01G240600 chr5B 82.716 81 13 1 3208 3288 636891760 636891839 2.480000e-08 71.3
60 TraesCS7D01G240600 chr4D 83.088 272 35 4 426 687 5115673 5115403 2.310000e-58 237.0
61 TraesCS7D01G240600 chr4D 75.926 270 43 13 421 675 69178300 69178038 8.750000e-23 119.0
62 TraesCS7D01G240600 chr5D 82.264 265 39 4 421 677 74113168 74113432 6.480000e-54 222.0
63 TraesCS7D01G240600 chr4A 85.106 141 13 1 548 680 523306132 523305992 2.420000e-28 137.0
64 TraesCS7D01G240600 chr2D 74.818 274 49 13 421 680 103066136 103066403 6.810000e-19 106.0
65 TraesCS7D01G240600 chr6A 89.189 74 8 0 2089 2162 498580088 498580161 5.300000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G240600 chr7D 205130726 205135700 4974 False 3111.400000 9188 93.220667 1 4975 3 chr7D.!!$F4 4974
1 TraesCS7D01G240600 chr7D 83063539 83064968 1429 False 689.500000 1181 88.289500 1346 2751 2 chr7D.!!$F3 1405
2 TraesCS7D01G240600 chr7D 82898997 82902698 3701 False 662.000000 920 87.976667 974 2966 3 chr7D.!!$F2 1992
3 TraesCS7D01G240600 chr7D 582302046 582304005 1959 True 491.666667 920 86.364000 996 3980 3 chr7D.!!$R3 2984
4 TraesCS7D01G240600 chr7B 169432314 169436489 4175 False 1240.680000 4396 93.886200 1 4402 5 chr7B.!!$F6 4401
5 TraesCS7D01G240600 chr7B 650129100 650130060 960 True 952.000000 952 84.514000 999 1985 1 chr7B.!!$R1 986
6 TraesCS7D01G240600 chr7B 32344796 32345436 640 False 913.000000 913 92.356000 1346 1986 1 chr7B.!!$F1 640
7 TraesCS7D01G240600 chr7B 32330481 32332254 1773 False 612.333333 918 88.138000 974 2751 3 chr7B.!!$F4 1777
8 TraesCS7D01G240600 chr7B 32408321 32410497 2176 False 443.500000 880 86.903750 975 2764 4 chr7B.!!$F5 1789
9 TraesCS7D01G240600 chr7A 217202367 217206444 4077 False 2970.000000 4300 92.166500 721 4734 2 chr7A.!!$F4 4013
10 TraesCS7D01G240600 chr7A 85031192 85032379 1187 False 1127.000000 1127 84.267000 1346 2523 1 chr7A.!!$F1 1177
11 TraesCS7D01G240600 chr7A 84854635 84856564 1929 False 923.000000 1517 86.719000 974 2980 2 chr7A.!!$F3 2006
12 TraesCS7D01G240600 chr7A 674273424 674275164 1740 True 671.000000 963 85.709000 1018 2961 2 chr7A.!!$R3 1943
13 TraesCS7D01G240600 chr2B 792122611 792124396 1785 True 783.500000 872 86.096000 1316 3083 2 chr2B.!!$R1 1767

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
443 446 0.107848 CCCTCCGTCCGCAAATAAGT 60.108 55.000 0.00 0.0 0.00 2.24 F
670 673 0.822164 ACTTATTCACGGACGGAGGG 59.178 55.000 0.00 0.0 0.00 4.30 F
1320 1344 0.657840 GCATACCATTGCCGACTGAC 59.342 55.000 0.00 0.0 36.60 3.51 F
2376 4465 1.214589 GTTGCTCATTGGGCTGCTG 59.785 57.895 10.41 0.0 0.00 4.41 F
3222 5868 1.078426 CGGAAAGGCGGATCAACCT 60.078 57.895 0.00 0.0 38.14 3.50 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1293 1317 2.112198 CAATGGTATGCGGTGCCGT 61.112 57.895 12.46 0.00 42.09 5.68 R
2376 4465 2.672996 AACACGAGGGCCATGCAC 60.673 61.111 6.18 0.00 0.00 4.57 R
3204 5850 0.676782 AAGGTTGATCCGCCTTTCCG 60.677 55.000 10.95 0.00 41.93 4.30 R
3338 5987 0.254178 CATGAGGTGGGTCCCTTCTG 59.746 60.000 10.00 2.13 34.03 3.02 R
4706 7450 0.033504 AACTCAGCGATGGTCGTGTT 59.966 50.000 0.00 0.00 42.81 3.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.990318 TTTCAAACACACACACACACA 57.010 38.095 0.00 0.00 0.00 3.72
46 47 7.047891 CACACATAGAGGCTAAATTCCTAACA 58.952 38.462 0.00 0.00 33.24 2.41
63 64 2.256117 ACACACACAGGGAGTTTAGC 57.744 50.000 0.00 0.00 0.00 3.09
123 126 7.573710 TCTAATCATACAAGTTATGGTTGCCT 58.426 34.615 0.88 0.00 31.43 4.75
125 128 5.172687 TCATACAAGTTATGGTTGCCTCA 57.827 39.130 0.00 0.00 0.00 3.86
140 143 3.215151 TGCCTCATTCCGTGTTAAAACA 58.785 40.909 0.00 0.00 36.38 2.83
142 145 5.004448 TGCCTCATTCCGTGTTAAAACATA 58.996 37.500 0.00 0.00 41.59 2.29
143 146 5.473846 TGCCTCATTCCGTGTTAAAACATAA 59.526 36.000 0.00 0.00 41.59 1.90
144 147 6.016192 TGCCTCATTCCGTGTTAAAACATAAA 60.016 34.615 0.00 0.00 41.59 1.40
172 175 3.515502 TGGTGGTTCATCAGAGTTAGGAG 59.484 47.826 0.00 0.00 0.00 3.69
183 186 3.900601 CAGAGTTAGGAGGCATATGAGGT 59.099 47.826 6.97 0.00 0.00 3.85
244 247 3.355378 TGAATCATTGCCAATTCGGACT 58.645 40.909 0.00 0.00 36.56 3.85
289 292 4.986783 TCTCTCGGGTCTATGACATGTAT 58.013 43.478 0.00 0.00 33.68 2.29
290 293 4.762251 TCTCTCGGGTCTATGACATGTATG 59.238 45.833 0.00 0.00 33.68 2.39
384 387 9.762933 ACATTTGCAATTTAATTACAGTGACTT 57.237 25.926 0.00 0.00 0.00 3.01
389 392 8.682710 TGCAATTTAATTACAGTGACTTATCCC 58.317 33.333 3.38 0.00 0.00 3.85
390 393 8.135529 GCAATTTAATTACAGTGACTTATCCCC 58.864 37.037 3.38 0.00 0.00 4.81
391 394 8.630037 CAATTTAATTACAGTGACTTATCCCCC 58.370 37.037 0.00 0.00 0.00 5.40
429 432 5.678955 AATTACTGTGACTTACTCCCTCC 57.321 43.478 0.00 0.00 0.00 4.30
430 433 1.546961 ACTGTGACTTACTCCCTCCG 58.453 55.000 0.00 0.00 0.00 4.63
431 434 1.203025 ACTGTGACTTACTCCCTCCGT 60.203 52.381 0.00 0.00 0.00 4.69
432 435 1.473278 CTGTGACTTACTCCCTCCGTC 59.527 57.143 0.00 0.00 0.00 4.79
433 436 0.816373 GTGACTTACTCCCTCCGTCC 59.184 60.000 0.00 0.00 0.00 4.79
434 437 0.679002 TGACTTACTCCCTCCGTCCG 60.679 60.000 0.00 0.00 0.00 4.79
435 438 2.002509 GACTTACTCCCTCCGTCCGC 62.003 65.000 0.00 0.00 0.00 5.54
436 439 2.036098 TTACTCCCTCCGTCCGCA 59.964 61.111 0.00 0.00 0.00 5.69
437 440 1.601419 CTTACTCCCTCCGTCCGCAA 61.601 60.000 0.00 0.00 0.00 4.85
438 441 1.186917 TTACTCCCTCCGTCCGCAAA 61.187 55.000 0.00 0.00 0.00 3.68
439 442 0.974010 TACTCCCTCCGTCCGCAAAT 60.974 55.000 0.00 0.00 0.00 2.32
440 443 0.974010 ACTCCCTCCGTCCGCAAATA 60.974 55.000 0.00 0.00 0.00 1.40
441 444 0.177141 CTCCCTCCGTCCGCAAATAA 59.823 55.000 0.00 0.00 0.00 1.40
442 445 0.177141 TCCCTCCGTCCGCAAATAAG 59.823 55.000 0.00 0.00 0.00 1.73
443 446 0.107848 CCCTCCGTCCGCAAATAAGT 60.108 55.000 0.00 0.00 0.00 2.24
444 447 1.006832 CCTCCGTCCGCAAATAAGTG 58.993 55.000 0.00 0.00 0.00 3.16
445 448 1.674817 CCTCCGTCCGCAAATAAGTGT 60.675 52.381 0.00 0.00 0.00 3.55
446 449 2.417651 CCTCCGTCCGCAAATAAGTGTA 60.418 50.000 0.00 0.00 0.00 2.90
447 450 2.601763 CTCCGTCCGCAAATAAGTGTAC 59.398 50.000 0.00 0.00 0.00 2.90
448 451 2.231964 TCCGTCCGCAAATAAGTGTACT 59.768 45.455 0.00 0.00 0.00 2.73
449 452 2.997986 CCGTCCGCAAATAAGTGTACTT 59.002 45.455 2.51 2.51 39.85 2.24
450 453 3.061697 CCGTCCGCAAATAAGTGTACTTC 59.938 47.826 0.00 0.00 37.40 3.01
451 454 3.924686 CGTCCGCAAATAAGTGTACTTCT 59.075 43.478 0.00 0.00 37.40 2.85
452 455 5.097529 CGTCCGCAAATAAGTGTACTTCTA 58.902 41.667 0.00 0.00 37.40 2.10
453 456 5.004156 CGTCCGCAAATAAGTGTACTTCTAC 59.996 44.000 0.00 0.00 37.40 2.59
454 457 5.004156 GTCCGCAAATAAGTGTACTTCTACG 59.996 44.000 0.00 0.69 37.40 3.51
455 458 4.860907 CCGCAAATAAGTGTACTTCTACGT 59.139 41.667 0.00 0.00 37.40 3.57
456 459 5.346822 CCGCAAATAAGTGTACTTCTACGTT 59.653 40.000 0.00 0.00 37.40 3.99
457 460 6.128742 CCGCAAATAAGTGTACTTCTACGTTT 60.129 38.462 0.00 0.00 37.40 3.60
458 461 7.285788 CGCAAATAAGTGTACTTCTACGTTTT 58.714 34.615 0.00 0.00 37.40 2.43
459 462 7.265495 CGCAAATAAGTGTACTTCTACGTTTTG 59.735 37.037 0.00 0.00 37.40 2.44
460 463 7.059147 GCAAATAAGTGTACTTCTACGTTTTGC 59.941 37.037 8.30 8.30 37.40 3.68
461 464 7.958053 AATAAGTGTACTTCTACGTTTTGCT 57.042 32.000 0.00 0.00 37.40 3.91
462 465 5.902051 AAGTGTACTTCTACGTTTTGCTC 57.098 39.130 0.00 0.00 0.00 4.26
463 466 5.197682 AGTGTACTTCTACGTTTTGCTCT 57.802 39.130 0.00 0.00 0.00 4.09
464 467 6.323203 AGTGTACTTCTACGTTTTGCTCTA 57.677 37.500 0.00 0.00 0.00 2.43
465 468 6.742109 AGTGTACTTCTACGTTTTGCTCTAA 58.258 36.000 0.00 0.00 0.00 2.10
466 469 6.862090 AGTGTACTTCTACGTTTTGCTCTAAG 59.138 38.462 0.00 0.00 0.00 2.18
467 470 6.640092 GTGTACTTCTACGTTTTGCTCTAAGT 59.360 38.462 0.00 0.00 0.00 2.24
468 471 6.860023 TGTACTTCTACGTTTTGCTCTAAGTC 59.140 38.462 0.00 0.00 0.00 3.01
469 472 5.839621 ACTTCTACGTTTTGCTCTAAGTCA 58.160 37.500 0.00 0.00 0.00 3.41
470 473 6.278363 ACTTCTACGTTTTGCTCTAAGTCAA 58.722 36.000 0.00 0.00 0.00 3.18
471 474 6.759827 ACTTCTACGTTTTGCTCTAAGTCAAA 59.240 34.615 0.00 0.00 0.00 2.69
472 475 6.764877 TCTACGTTTTGCTCTAAGTCAAAG 57.235 37.500 0.00 0.00 34.21 2.77
473 476 6.278363 TCTACGTTTTGCTCTAAGTCAAAGT 58.722 36.000 0.00 0.00 34.21 2.66
474 477 5.813080 ACGTTTTGCTCTAAGTCAAAGTT 57.187 34.783 0.00 0.00 34.21 2.66
475 478 6.190954 ACGTTTTGCTCTAAGTCAAAGTTT 57.809 33.333 0.00 0.00 34.21 2.66
476 479 6.617879 ACGTTTTGCTCTAAGTCAAAGTTTT 58.382 32.000 0.00 0.00 34.21 2.43
477 480 7.754625 ACGTTTTGCTCTAAGTCAAAGTTTTA 58.245 30.769 0.00 0.00 34.21 1.52
478 481 8.238631 ACGTTTTGCTCTAAGTCAAAGTTTTAA 58.761 29.630 0.00 0.00 34.21 1.52
479 482 9.068008 CGTTTTGCTCTAAGTCAAAGTTTTAAA 57.932 29.630 0.00 0.00 34.21 1.52
563 566 6.753897 GAAAGTGCATTTCAAAACGAATCT 57.246 33.333 13.41 0.00 45.63 2.40
564 567 7.165427 GAAAGTGCATTTCAAAACGAATCTT 57.835 32.000 13.41 0.00 45.63 2.40
565 568 6.515043 AAGTGCATTTCAAAACGAATCTTG 57.485 33.333 0.00 0.00 32.32 3.02
566 569 5.591099 AGTGCATTTCAAAACGAATCTTGT 58.409 33.333 0.00 0.00 32.32 3.16
567 570 5.459762 AGTGCATTTCAAAACGAATCTTGTG 59.540 36.000 0.00 0.00 32.32 3.33
568 571 5.458452 GTGCATTTCAAAACGAATCTTGTGA 59.542 36.000 0.00 0.00 32.32 3.58
569 572 6.144402 GTGCATTTCAAAACGAATCTTGTGAT 59.856 34.615 0.00 0.00 32.32 3.06
570 573 7.325821 GTGCATTTCAAAACGAATCTTGTGATA 59.674 33.333 0.00 0.00 32.32 2.15
571 574 7.325821 TGCATTTCAAAACGAATCTTGTGATAC 59.674 33.333 0.00 0.00 32.32 2.24
572 575 7.538678 GCATTTCAAAACGAATCTTGTGATACT 59.461 33.333 0.00 0.00 32.32 2.12
575 578 8.827177 TTCAAAACGAATCTTGTGATACTACT 57.173 30.769 0.00 0.00 31.70 2.57
576 579 8.827177 TCAAAACGAATCTTGTGATACTACTT 57.173 30.769 0.00 0.00 31.70 2.24
577 580 9.268268 TCAAAACGAATCTTGTGATACTACTTT 57.732 29.630 0.00 0.00 31.70 2.66
580 583 9.924650 AAACGAATCTTGTGATACTACTTTAGT 57.075 29.630 0.00 0.00 42.68 2.24
581 584 8.912787 ACGAATCTTGTGATACTACTTTAGTG 57.087 34.615 0.00 0.00 39.81 2.74
582 585 7.488471 ACGAATCTTGTGATACTACTTTAGTGC 59.512 37.037 0.00 0.00 39.81 4.40
583 586 7.043325 CGAATCTTGTGATACTACTTTAGTGCC 60.043 40.741 0.00 0.00 39.81 5.01
584 587 6.599356 TCTTGTGATACTACTTTAGTGCCA 57.401 37.500 0.00 0.00 39.81 4.92
585 588 7.182817 TCTTGTGATACTACTTTAGTGCCAT 57.817 36.000 0.00 0.00 39.81 4.40
586 589 8.301252 TCTTGTGATACTACTTTAGTGCCATA 57.699 34.615 0.00 0.00 39.81 2.74
587 590 8.755028 TCTTGTGATACTACTTTAGTGCCATAA 58.245 33.333 0.00 0.00 39.81 1.90
588 591 9.378551 CTTGTGATACTACTTTAGTGCCATAAA 57.621 33.333 0.00 0.00 39.81 1.40
589 592 9.899661 TTGTGATACTACTTTAGTGCCATAAAT 57.100 29.630 0.00 0.00 39.81 1.40
590 593 9.325198 TGTGATACTACTTTAGTGCCATAAATG 57.675 33.333 0.00 0.00 39.81 2.32
591 594 8.283291 GTGATACTACTTTAGTGCCATAAATGC 58.717 37.037 0.00 0.00 39.81 3.56
592 595 8.210946 TGATACTACTTTAGTGCCATAAATGCT 58.789 33.333 0.00 0.00 39.81 3.79
593 596 6.683974 ACTACTTTAGTGCCATAAATGCTG 57.316 37.500 0.00 0.00 37.69 4.41
594 597 4.376340 ACTTTAGTGCCATAAATGCTGC 57.624 40.909 0.00 0.00 0.00 5.25
595 598 3.763360 ACTTTAGTGCCATAAATGCTGCA 59.237 39.130 4.13 4.13 0.00 4.41
596 599 4.220382 ACTTTAGTGCCATAAATGCTGCAA 59.780 37.500 6.36 0.00 35.16 4.08
597 600 2.660189 AGTGCCATAAATGCTGCAAC 57.340 45.000 6.36 0.00 35.16 4.17
598 601 2.173519 AGTGCCATAAATGCTGCAACT 58.826 42.857 6.36 0.00 35.16 3.16
599 602 2.564062 AGTGCCATAAATGCTGCAACTT 59.436 40.909 6.36 5.99 35.16 2.66
600 603 3.007182 AGTGCCATAAATGCTGCAACTTT 59.993 39.130 6.36 6.44 35.16 2.66
601 604 3.747529 GTGCCATAAATGCTGCAACTTTT 59.252 39.130 6.36 5.65 35.16 2.27
602 605 3.995705 TGCCATAAATGCTGCAACTTTTC 59.004 39.130 6.36 0.00 0.00 2.29
603 606 3.371898 GCCATAAATGCTGCAACTTTTCC 59.628 43.478 6.36 0.00 0.00 3.13
604 607 4.824289 CCATAAATGCTGCAACTTTTCCT 58.176 39.130 6.36 0.00 0.00 3.36
605 608 4.628333 CCATAAATGCTGCAACTTTTCCTG 59.372 41.667 6.36 4.86 0.00 3.86
606 609 5.472148 CATAAATGCTGCAACTTTTCCTGA 58.528 37.500 6.36 0.00 0.00 3.86
607 610 4.612264 AAATGCTGCAACTTTTCCTGAT 57.388 36.364 6.36 0.00 0.00 2.90
608 611 5.726980 AAATGCTGCAACTTTTCCTGATA 57.273 34.783 6.36 0.00 0.00 2.15
609 612 5.726980 AATGCTGCAACTTTTCCTGATAA 57.273 34.783 6.36 0.00 0.00 1.75
610 613 5.726980 ATGCTGCAACTTTTCCTGATAAA 57.273 34.783 6.36 0.00 0.00 1.40
611 614 5.125100 TGCTGCAACTTTTCCTGATAAAG 57.875 39.130 0.00 0.00 38.32 1.85
612 615 4.584325 TGCTGCAACTTTTCCTGATAAAGT 59.416 37.500 0.00 0.00 45.18 2.66
621 624 8.622948 ACTTTTCCTGATAAAGTTAGTCCAAG 57.377 34.615 0.00 0.00 41.69 3.61
622 625 8.218488 ACTTTTCCTGATAAAGTTAGTCCAAGT 58.782 33.333 0.00 0.00 41.69 3.16
623 626 8.990163 TTTTCCTGATAAAGTTAGTCCAAGTT 57.010 30.769 0.00 0.00 0.00 2.66
624 627 8.990163 TTTCCTGATAAAGTTAGTCCAAGTTT 57.010 30.769 0.00 0.00 41.60 2.66
625 628 8.990163 TTCCTGATAAAGTTAGTCCAAGTTTT 57.010 30.769 0.00 0.00 39.82 2.43
626 629 8.391075 TCCTGATAAAGTTAGTCCAAGTTTTG 57.609 34.615 0.00 0.00 39.82 2.44
627 630 8.215050 TCCTGATAAAGTTAGTCCAAGTTTTGA 58.785 33.333 0.00 0.00 39.82 2.69
628 631 8.290325 CCTGATAAAGTTAGTCCAAGTTTTGAC 58.710 37.037 0.00 0.00 39.82 3.18
629 632 8.974060 TGATAAAGTTAGTCCAAGTTTTGACT 57.026 30.769 9.22 9.22 39.82 3.41
630 633 9.403583 TGATAAAGTTAGTCCAAGTTTTGACTT 57.596 29.630 9.47 0.00 39.82 3.01
633 636 7.803279 AAGTTAGTCCAAGTTTTGACTTAGG 57.197 36.000 9.47 0.00 0.00 2.69
634 637 7.133133 AGTTAGTCCAAGTTTTGACTTAGGA 57.867 36.000 9.47 0.00 0.00 2.94
635 638 6.990939 AGTTAGTCCAAGTTTTGACTTAGGAC 59.009 38.462 20.71 20.71 42.03 3.85
636 639 4.715713 AGTCCAAGTTTTGACTTAGGACC 58.284 43.478 22.59 13.38 42.31 4.46
637 640 4.165372 AGTCCAAGTTTTGACTTAGGACCA 59.835 41.667 22.59 0.00 42.31 4.02
638 641 4.885325 GTCCAAGTTTTGACTTAGGACCAA 59.115 41.667 19.16 0.00 39.36 3.67
639 642 5.358725 GTCCAAGTTTTGACTTAGGACCAAA 59.641 40.000 19.16 0.55 39.36 3.28
640 643 5.592688 TCCAAGTTTTGACTTAGGACCAAAG 59.407 40.000 0.00 0.00 32.30 2.77
641 644 5.221244 CCAAGTTTTGACTTAGGACCAAAGG 60.221 44.000 0.00 0.00 32.30 3.11
642 645 5.125367 AGTTTTGACTTAGGACCAAAGGT 57.875 39.130 0.00 0.00 39.44 3.50
643 646 6.256643 AGTTTTGACTTAGGACCAAAGGTA 57.743 37.500 0.00 0.00 35.25 3.08
644 647 6.296803 AGTTTTGACTTAGGACCAAAGGTAG 58.703 40.000 0.00 0.00 35.25 3.18
645 648 6.100714 AGTTTTGACTTAGGACCAAAGGTAGA 59.899 38.462 0.00 0.00 35.25 2.59
646 649 6.697641 TTTGACTTAGGACCAAAGGTAGAT 57.302 37.500 0.00 0.00 35.25 1.98
647 650 5.677319 TGACTTAGGACCAAAGGTAGATG 57.323 43.478 0.00 0.00 35.25 2.90
648 651 5.091552 TGACTTAGGACCAAAGGTAGATGT 58.908 41.667 0.00 0.00 35.25 3.06
649 652 6.258354 TGACTTAGGACCAAAGGTAGATGTA 58.742 40.000 0.00 0.00 35.25 2.29
650 653 6.154021 TGACTTAGGACCAAAGGTAGATGTAC 59.846 42.308 0.00 0.00 35.25 2.90
651 654 6.021030 ACTTAGGACCAAAGGTAGATGTACA 58.979 40.000 0.00 0.00 35.25 2.90
652 655 4.820894 AGGACCAAAGGTAGATGTACAC 57.179 45.455 0.00 0.00 35.25 2.90
653 656 4.426704 AGGACCAAAGGTAGATGTACACT 58.573 43.478 0.00 0.13 35.25 3.55
654 657 4.844655 AGGACCAAAGGTAGATGTACACTT 59.155 41.667 0.00 0.00 35.25 3.16
655 658 6.021030 AGGACCAAAGGTAGATGTACACTTA 58.979 40.000 0.00 0.00 35.25 2.24
656 659 6.672657 AGGACCAAAGGTAGATGTACACTTAT 59.327 38.462 0.00 0.00 35.25 1.73
657 660 7.182206 AGGACCAAAGGTAGATGTACACTTATT 59.818 37.037 0.00 0.00 35.25 1.40
658 661 7.494952 GGACCAAAGGTAGATGTACACTTATTC 59.505 40.741 0.00 0.00 35.25 1.75
659 662 7.913789 ACCAAAGGTAGATGTACACTTATTCA 58.086 34.615 0.00 0.00 32.11 2.57
660 663 7.822822 ACCAAAGGTAGATGTACACTTATTCAC 59.177 37.037 0.00 0.00 32.11 3.18
661 664 7.010183 CCAAAGGTAGATGTACACTTATTCACG 59.990 40.741 0.00 0.00 0.00 4.35
662 665 6.145338 AGGTAGATGTACACTTATTCACGG 57.855 41.667 0.00 0.00 0.00 4.94
663 666 5.889853 AGGTAGATGTACACTTATTCACGGA 59.110 40.000 0.00 0.00 0.00 4.69
664 667 5.975939 GGTAGATGTACACTTATTCACGGAC 59.024 44.000 0.00 0.00 0.00 4.79
665 668 4.669318 AGATGTACACTTATTCACGGACG 58.331 43.478 0.00 0.00 0.00 4.79
666 669 3.220507 TGTACACTTATTCACGGACGG 57.779 47.619 0.00 0.00 0.00 4.79
667 670 2.819019 TGTACACTTATTCACGGACGGA 59.181 45.455 0.00 0.00 0.00 4.69
668 671 2.649331 ACACTTATTCACGGACGGAG 57.351 50.000 0.00 0.00 0.00 4.63
669 672 1.203994 ACACTTATTCACGGACGGAGG 59.796 52.381 0.00 0.00 0.00 4.30
670 673 0.822164 ACTTATTCACGGACGGAGGG 59.178 55.000 0.00 0.00 0.00 4.30
671 674 1.108776 CTTATTCACGGACGGAGGGA 58.891 55.000 0.00 0.00 0.00 4.20
672 675 1.067212 CTTATTCACGGACGGAGGGAG 59.933 57.143 0.00 0.00 0.00 4.30
688 691 1.484240 GGGAGTATGAGTGAGCTTGCT 59.516 52.381 0.00 0.00 0.00 3.91
696 699 1.484240 GAGTGAGCTTGCTGGTATCCT 59.516 52.381 0.00 0.00 0.00 3.24
701 704 3.519510 TGAGCTTGCTGGTATCCTTACTT 59.480 43.478 0.00 0.00 0.00 2.24
711 714 3.621715 GGTATCCTTACTTCTGGTTTGCG 59.378 47.826 0.00 0.00 0.00 4.85
1270 1287 1.072852 GCCAGCATCCATCTCCTCC 59.927 63.158 0.00 0.00 0.00 4.30
1311 1335 1.653094 AACGGCACCGCATACCATTG 61.653 55.000 9.43 0.00 44.19 2.82
1312 1336 2.412937 GGCACCGCATACCATTGC 59.587 61.111 0.00 0.00 39.29 3.56
1313 1337 2.412937 GCACCGCATACCATTGCC 59.587 61.111 0.00 0.00 39.52 4.52
1315 1339 1.817520 CACCGCATACCATTGCCGA 60.818 57.895 0.00 0.00 39.52 5.54
1316 1340 1.817941 ACCGCATACCATTGCCGAC 60.818 57.895 0.00 0.00 39.52 4.79
1318 1342 1.643292 CGCATACCATTGCCGACTG 59.357 57.895 0.00 0.00 39.52 3.51
1319 1343 0.809636 CGCATACCATTGCCGACTGA 60.810 55.000 0.00 0.00 39.52 3.41
1320 1344 0.657840 GCATACCATTGCCGACTGAC 59.342 55.000 0.00 0.00 36.60 3.51
1321 1345 1.299541 CATACCATTGCCGACTGACC 58.700 55.000 0.00 0.00 0.00 4.02
1496 1545 1.337447 CCCTTCTACGTCTTTGCCGAA 60.337 52.381 0.00 0.00 0.00 4.30
1619 1668 1.228124 CACCGCCAAGTTCCTCCAA 60.228 57.895 0.00 0.00 0.00 3.53
1700 1749 2.973148 GGTCACCTACCTCCTCGTT 58.027 57.895 0.00 0.00 45.75 3.85
2376 4465 1.214589 GTTGCTCATTGGGCTGCTG 59.785 57.895 10.41 0.00 0.00 4.41
2850 5487 7.255451 GGTTGTGAATTTGAGACATTGGTTCTA 60.255 37.037 0.00 0.00 0.00 2.10
2966 5605 2.879026 GGTATGAAATTCCTTCGCCCTC 59.121 50.000 0.00 0.00 36.78 4.30
3192 5834 7.361286 CCTTTCCAATCTTGAGTAAGCACTTAC 60.361 40.741 11.76 11.76 44.22 2.34
3193 5835 6.109156 TCCAATCTTGAGTAAGCACTTACA 57.891 37.500 19.74 2.42 45.79 2.41
3216 5862 2.194201 TTTTCTTCGGAAAGGCGGAT 57.806 45.000 0.00 0.00 43.66 4.18
3222 5868 1.078426 CGGAAAGGCGGATCAACCT 60.078 57.895 0.00 0.00 38.14 3.50
3237 5883 1.546923 CAACCTTTGGCATCTGCATCA 59.453 47.619 4.33 0.00 44.36 3.07
3252 5898 1.609932 CATCAGTTGATGCACGCAAC 58.390 50.000 20.77 20.77 44.44 4.17
3293 5939 4.340666 TCAACAATGTCAAGCAAAGCCTAA 59.659 37.500 0.00 0.00 0.00 2.69
3298 5944 3.020274 TGTCAAGCAAAGCCTAACAACA 58.980 40.909 0.00 0.00 0.00 3.33
3312 5958 5.685841 CCTAACAACAATGTCGAACGAATT 58.314 37.500 0.00 0.00 39.40 2.17
3314 5960 6.953743 CCTAACAACAATGTCGAACGAATTAG 59.046 38.462 0.00 0.00 39.40 1.73
3316 5962 4.088648 CAACAATGTCGAACGAATTAGCC 58.911 43.478 0.00 0.00 0.00 3.93
3343 5992 0.038744 ACCAAGGCCATCCACAGAAG 59.961 55.000 5.01 0.00 33.74 2.85
3356 6005 0.178861 ACAGAAGGGACCCACCTCAT 60.179 55.000 14.60 0.00 40.87 2.90
3362 6011 0.625849 GGGACCCACCTCATGACAAT 59.374 55.000 5.33 0.00 38.98 2.71
3363 6012 1.005924 GGGACCCACCTCATGACAATT 59.994 52.381 5.33 0.00 38.98 2.32
3392 6043 4.522789 CCAAACCTACAACAAAGCCTATGT 59.477 41.667 0.00 0.00 0.00 2.29
3400 6051 4.216257 ACAACAAAGCCTATGTCATGTGTC 59.784 41.667 0.00 0.00 0.00 3.67
3402 6053 2.315925 AAGCCTATGTCATGTGTCCG 57.684 50.000 0.00 0.00 0.00 4.79
3408 6059 4.191544 CCTATGTCATGTGTCCGAACAAT 58.808 43.478 0.00 0.00 37.08 2.71
3424 6075 6.094325 TCCGAACAATGAACAAAAACACTACT 59.906 34.615 0.00 0.00 0.00 2.57
3426 6077 6.138546 CGAACAATGAACAAAAACACTACTCG 59.861 38.462 0.00 0.00 0.00 4.18
3462 6113 2.157834 TAAGGAATCACAACACGCGT 57.842 45.000 5.58 5.58 0.00 6.01
3463 6114 0.865769 AAGGAATCACAACACGCGTC 59.134 50.000 9.86 0.00 0.00 5.19
3466 6117 1.136690 GAATCACAACACGCGTCTCA 58.863 50.000 9.86 0.00 0.00 3.27
3473 6124 1.282248 AACACGCGTCTCAATGTCGG 61.282 55.000 9.86 0.00 0.00 4.79
3503 6154 1.624813 CCAAAGGTTGCATGTTGGGAT 59.375 47.619 9.30 0.00 37.46 3.85
3534 6185 3.756963 TCGAATATGATGACCCGGAGTAG 59.243 47.826 0.73 0.00 0.00 2.57
3535 6186 3.506455 CGAATATGATGACCCGGAGTAGT 59.494 47.826 0.73 0.00 0.00 2.73
3536 6187 4.698780 CGAATATGATGACCCGGAGTAGTA 59.301 45.833 0.73 0.00 0.00 1.82
3632 6325 2.839486 TTGACCGCTCTTGTGAGATT 57.161 45.000 0.00 0.00 42.73 2.40
3639 6332 4.191544 CCGCTCTTGTGAGATTCCAAATA 58.808 43.478 0.00 0.00 42.73 1.40
3640 6333 4.034510 CCGCTCTTGTGAGATTCCAAATAC 59.965 45.833 0.00 0.00 42.73 1.89
3641 6334 4.872691 CGCTCTTGTGAGATTCCAAATACT 59.127 41.667 0.00 0.00 42.73 2.12
3642 6335 6.042777 CGCTCTTGTGAGATTCCAAATACTA 58.957 40.000 0.00 0.00 42.73 1.82
3643 6336 6.199908 CGCTCTTGTGAGATTCCAAATACTAG 59.800 42.308 0.00 0.00 42.73 2.57
3644 6337 7.044798 GCTCTTGTGAGATTCCAAATACTAGT 58.955 38.462 0.00 0.00 42.73 2.57
3690 6383 3.803162 GGAGCAGGAAGAGGGCCC 61.803 72.222 16.46 16.46 0.00 5.80
3691 6384 3.803162 GAGCAGGAAGAGGGCCCC 61.803 72.222 21.43 10.60 0.00 5.80
3726 6419 0.814010 GACACTGTCACACCGCCTTT 60.814 55.000 4.17 0.00 32.09 3.11
3727 6420 0.393808 ACACTGTCACACCGCCTTTT 60.394 50.000 0.00 0.00 0.00 2.27
3738 6431 1.006832 CCGCCTTTTGTACTCATCCG 58.993 55.000 0.00 0.00 0.00 4.18
3760 6454 0.186386 AGGGAGATAGGGACACTCGG 59.814 60.000 0.00 0.00 0.00 4.63
3981 6675 6.097554 TCTCCTGGAAGAGAATTAGATCACAC 59.902 42.308 0.00 0.00 39.94 3.82
4110 6844 8.548877 ACCAGGTTGAATAACTATATGTCTTGT 58.451 33.333 0.00 0.00 36.99 3.16
4147 6888 6.038161 CCTGAATAGACATTTTTGTATGCGGA 59.962 38.462 0.00 0.00 0.00 5.54
4195 6936 4.744795 AAGACTTATCATGAGCGGAACT 57.255 40.909 0.09 0.00 0.00 3.01
4300 7041 5.239525 ACAGTCACTTGGTAAAAAGCAGATC 59.760 40.000 0.00 0.00 0.00 2.75
4351 7092 2.094234 GGCTTCAACGGCATACCAAAAT 60.094 45.455 0.00 0.00 34.57 1.82
4373 7114 0.526739 GCACGGCGACCAAACTTTTT 60.527 50.000 16.62 0.00 0.00 1.94
4417 7161 4.927267 TGGGTCTCCAACAGATACAAAT 57.073 40.909 0.00 0.00 40.73 2.32
4420 7164 4.878397 GGGTCTCCAACAGATACAAATCAG 59.122 45.833 0.00 0.00 34.28 2.90
4436 7180 5.637387 ACAAATCAGAAACACAAAACACACC 59.363 36.000 0.00 0.00 0.00 4.16
4440 7184 2.094957 AGAAACACAAAACACACCCACG 60.095 45.455 0.00 0.00 0.00 4.94
4441 7185 0.528470 AACACAAAACACACCCACGG 59.472 50.000 0.00 0.00 0.00 4.94
4442 7186 0.322636 ACACAAAACACACCCACGGA 60.323 50.000 0.00 0.00 0.00 4.69
4448 7192 1.928714 AACACACCCACGGAAACCCT 61.929 55.000 0.00 0.00 0.00 4.34
4459 7203 1.632965 GGAAACCCTATCCGCCTGGT 61.633 60.000 0.00 0.00 36.30 4.00
4471 7215 1.507141 CGCCTGGTATTTCATCGCCC 61.507 60.000 0.00 0.00 0.00 6.13
4475 7219 1.147600 GGTATTTCATCGCCCCCGT 59.852 57.895 0.00 0.00 35.54 5.28
4493 7237 3.732849 CCCTCCCCACCTTGCCTC 61.733 72.222 0.00 0.00 0.00 4.70
4496 7240 2.528127 TCCCCACCTTGCCTCGAA 60.528 61.111 0.00 0.00 0.00 3.71
4499 7243 1.376037 CCCACCTTGCCTCGAAGAC 60.376 63.158 0.00 0.00 0.00 3.01
4507 7251 3.691342 CCTCGAAGACGGCCACCA 61.691 66.667 2.24 0.00 40.21 4.17
4508 7252 2.432628 CTCGAAGACGGCCACCAC 60.433 66.667 2.24 0.00 40.21 4.16
4521 7265 4.096003 ACCACCTCCGCCATTCCG 62.096 66.667 0.00 0.00 0.00 4.30
4523 7267 2.511600 CACCTCCGCCATTCCGTC 60.512 66.667 0.00 0.00 0.00 4.79
4568 7312 1.153628 CCCACCGGTCGAGATGTTC 60.154 63.158 2.59 0.00 0.00 3.18
4619 7363 2.818274 GCCCGAAGTCGCCGATTT 60.818 61.111 0.00 0.00 38.18 2.17
4661 7405 3.106407 GCCCGATATGCTCGTCGC 61.106 66.667 0.00 0.00 46.18 5.19
4687 7431 2.900337 GGGGTCAATTAGCGGCCG 60.900 66.667 24.05 24.05 0.00 6.13
4724 7468 0.885879 TAACACGACCATCGCTGAGT 59.114 50.000 0.00 0.00 45.12 3.41
4729 7473 0.388520 CGACCATCGCTGAGTTGTGA 60.389 55.000 0.00 0.00 31.14 3.58
4741 7485 2.522836 AGTTGTGACTCTGTGCTGAG 57.477 50.000 4.83 4.83 39.78 3.35
4743 7487 2.169352 AGTTGTGACTCTGTGCTGAGTT 59.831 45.455 11.92 0.00 46.11 3.01
4744 7488 2.515926 TGTGACTCTGTGCTGAGTTC 57.484 50.000 11.92 9.47 46.11 3.01
4745 7489 2.034878 TGTGACTCTGTGCTGAGTTCT 58.965 47.619 11.92 0.00 46.11 3.01
4746 7490 2.432146 TGTGACTCTGTGCTGAGTTCTT 59.568 45.455 11.92 0.00 46.11 2.52
4747 7491 2.799412 GTGACTCTGTGCTGAGTTCTTG 59.201 50.000 11.92 0.00 46.11 3.02
4748 7492 2.224137 TGACTCTGTGCTGAGTTCTTGG 60.224 50.000 11.92 0.00 46.11 3.61
4749 7493 1.155042 CTCTGTGCTGAGTTCTTGGC 58.845 55.000 0.00 0.00 0.00 4.52
4750 7494 0.469494 TCTGTGCTGAGTTCTTGGCA 59.531 50.000 0.00 0.00 0.00 4.92
4753 7497 3.312404 TGCTGAGTTCTTGGCACTC 57.688 52.632 0.00 0.00 41.08 3.51
4754 7498 0.601046 TGCTGAGTTCTTGGCACTCG 60.601 55.000 0.00 0.00 43.26 4.18
4755 7499 1.294659 GCTGAGTTCTTGGCACTCGG 61.295 60.000 7.18 7.18 46.58 4.63
4756 7500 0.671781 CTGAGTTCTTGGCACTCGGG 60.672 60.000 4.23 0.00 43.26 5.14
4757 7501 2.032681 AGTTCTTGGCACTCGGGC 59.967 61.111 0.00 0.00 43.73 6.13
4777 7521 4.796231 CGTAGCGCCGCCAGAGTT 62.796 66.667 4.98 0.00 0.00 3.01
4778 7522 3.188786 GTAGCGCCGCCAGAGTTG 61.189 66.667 4.98 0.00 0.00 3.16
4795 7539 0.404040 TTGGACTCATCCCCAACACC 59.596 55.000 0.00 0.00 45.59 4.16
4796 7540 1.303282 GGACTCATCCCCAACACCC 59.697 63.158 0.00 0.00 39.39 4.61
4797 7541 1.303282 GACTCATCCCCAACACCCC 59.697 63.158 0.00 0.00 0.00 4.95
4798 7542 1.151587 ACTCATCCCCAACACCCCT 60.152 57.895 0.00 0.00 0.00 4.79
4799 7543 0.120377 ACTCATCCCCAACACCCCTA 59.880 55.000 0.00 0.00 0.00 3.53
4800 7544 1.295020 CTCATCCCCAACACCCCTAA 58.705 55.000 0.00 0.00 0.00 2.69
4801 7545 1.212935 CTCATCCCCAACACCCCTAAG 59.787 57.143 0.00 0.00 0.00 2.18
4802 7546 0.258774 CATCCCCAACACCCCTAAGG 59.741 60.000 0.00 0.00 43.78 2.69
4803 7547 1.580994 ATCCCCAACACCCCTAAGGC 61.581 60.000 0.00 0.00 40.58 4.35
4804 7548 2.359011 CCCAACACCCCTAAGGCC 59.641 66.667 0.00 0.00 40.58 5.19
4805 7549 2.238701 CCCAACACCCCTAAGGCCT 61.239 63.158 0.00 0.00 40.58 5.19
4806 7550 1.774300 CCAACACCCCTAAGGCCTT 59.226 57.895 24.18 24.18 40.58 4.35
4807 7551 0.114364 CCAACACCCCTAAGGCCTTT 59.886 55.000 26.08 8.06 40.58 3.11
4808 7552 1.256812 CAACACCCCTAAGGCCTTTG 58.743 55.000 26.08 22.01 40.58 2.77
4809 7553 0.541998 AACACCCCTAAGGCCTTTGC 60.542 55.000 26.08 0.00 40.58 3.68
4827 7571 3.420482 CCCCCTCCCCCACATGAC 61.420 72.222 0.00 0.00 0.00 3.06
4828 7572 3.797353 CCCCTCCCCCACATGACG 61.797 72.222 0.00 0.00 0.00 4.35
4829 7573 4.489771 CCCTCCCCCACATGACGC 62.490 72.222 0.00 0.00 0.00 5.19
4830 7574 3.716195 CCTCCCCCACATGACGCA 61.716 66.667 0.00 0.00 0.00 5.24
4831 7575 2.591753 CTCCCCCACATGACGCAT 59.408 61.111 0.00 0.00 0.00 4.73
4832 7576 1.077501 CTCCCCCACATGACGCATT 60.078 57.895 0.00 0.00 0.00 3.56
4833 7577 0.680921 CTCCCCCACATGACGCATTT 60.681 55.000 0.00 0.00 0.00 2.32
4834 7578 0.679640 TCCCCCACATGACGCATTTC 60.680 55.000 0.00 0.00 0.00 2.17
4835 7579 1.666209 CCCCCACATGACGCATTTCC 61.666 60.000 0.00 0.00 0.00 3.13
4836 7580 0.680921 CCCCACATGACGCATTTCCT 60.681 55.000 0.00 0.00 0.00 3.36
4837 7581 1.408127 CCCCACATGACGCATTTCCTA 60.408 52.381 0.00 0.00 0.00 2.94
4838 7582 1.942657 CCCACATGACGCATTTCCTAG 59.057 52.381 0.00 0.00 0.00 3.02
4839 7583 2.419990 CCCACATGACGCATTTCCTAGA 60.420 50.000 0.00 0.00 0.00 2.43
4840 7584 2.609459 CCACATGACGCATTTCCTAGAC 59.391 50.000 0.00 0.00 0.00 2.59
4841 7585 2.282555 CACATGACGCATTTCCTAGACG 59.717 50.000 0.00 0.00 0.00 4.18
4842 7586 1.860950 CATGACGCATTTCCTAGACGG 59.139 52.381 0.00 0.00 0.00 4.79
4843 7587 0.459585 TGACGCATTTCCTAGACGGC 60.460 55.000 0.00 0.00 0.00 5.68
4844 7588 1.152383 GACGCATTTCCTAGACGGCC 61.152 60.000 0.00 0.00 0.00 6.13
4845 7589 2.237751 CGCATTTCCTAGACGGCCG 61.238 63.158 26.86 26.86 0.00 6.13
4846 7590 1.887707 GCATTTCCTAGACGGCCGG 60.888 63.158 31.76 11.50 0.00 6.13
4847 7591 1.520666 CATTTCCTAGACGGCCGGT 59.479 57.895 31.76 19.09 0.00 5.28
4848 7592 0.810031 CATTTCCTAGACGGCCGGTG 60.810 60.000 31.76 15.51 0.00 4.94
4849 7593 1.968050 ATTTCCTAGACGGCCGGTGG 61.968 60.000 31.76 23.53 0.00 4.61
4868 7612 4.271816 CGTCTCGCCCCCGATGAG 62.272 72.222 0.00 0.00 43.47 2.90
4869 7613 4.593864 GTCTCGCCCCCGATGAGC 62.594 72.222 0.00 0.00 43.47 4.26
4870 7614 4.841617 TCTCGCCCCCGATGAGCT 62.842 66.667 0.00 0.00 43.47 4.09
4871 7615 2.912542 CTCGCCCCCGATGAGCTA 60.913 66.667 0.00 0.00 43.47 3.32
4872 7616 3.214250 CTCGCCCCCGATGAGCTAC 62.214 68.421 0.00 0.00 43.47 3.58
4873 7617 3.227276 CGCCCCCGATGAGCTACT 61.227 66.667 0.00 0.00 36.29 2.57
4874 7618 2.797278 CGCCCCCGATGAGCTACTT 61.797 63.158 0.00 0.00 36.29 2.24
4875 7619 1.069935 GCCCCCGATGAGCTACTTC 59.930 63.158 0.00 0.00 0.00 3.01
4876 7620 1.686325 GCCCCCGATGAGCTACTTCA 61.686 60.000 0.00 0.00 0.00 3.02
4877 7621 0.390860 CCCCCGATGAGCTACTTCAG 59.609 60.000 0.00 0.00 0.00 3.02
4887 7631 1.079503 GCTACTTCAGCCGAAACTGG 58.920 55.000 0.00 0.00 45.23 4.00
4888 7632 1.726853 CTACTTCAGCCGAAACTGGG 58.273 55.000 0.00 0.00 38.26 4.45
4896 7640 1.508088 CCGAAACTGGGCTTGATGC 59.492 57.895 0.00 0.00 41.94 3.91
4911 7655 3.350377 TGCCCACGCAAACTAAGC 58.650 55.556 0.00 0.00 43.74 3.09
4912 7656 1.228124 TGCCCACGCAAACTAAGCT 60.228 52.632 0.00 0.00 43.74 3.74
4913 7657 0.035598 TGCCCACGCAAACTAAGCTA 59.964 50.000 0.00 0.00 43.74 3.32
4914 7658 0.727398 GCCCACGCAAACTAAGCTAG 59.273 55.000 0.00 0.00 34.03 3.42
4915 7659 1.369625 CCCACGCAAACTAAGCTAGG 58.630 55.000 0.00 0.00 0.00 3.02
4916 7660 0.727398 CCACGCAAACTAAGCTAGGC 59.273 55.000 0.00 0.00 0.00 3.93
4917 7661 1.438651 CACGCAAACTAAGCTAGGCA 58.561 50.000 0.00 0.00 0.00 4.75
4918 7662 1.804151 CACGCAAACTAAGCTAGGCAA 59.196 47.619 0.00 0.00 0.00 4.52
4919 7663 1.804748 ACGCAAACTAAGCTAGGCAAC 59.195 47.619 0.00 0.00 0.00 4.17
4920 7664 1.804151 CGCAAACTAAGCTAGGCAACA 59.196 47.619 0.00 0.00 41.41 3.33
4921 7665 2.225491 CGCAAACTAAGCTAGGCAACAA 59.775 45.455 0.00 0.00 41.41 2.83
4922 7666 3.304391 CGCAAACTAAGCTAGGCAACAAA 60.304 43.478 0.00 0.00 41.41 2.83
4923 7667 4.616953 GCAAACTAAGCTAGGCAACAAAA 58.383 39.130 0.00 0.00 41.41 2.44
4924 7668 5.230182 GCAAACTAAGCTAGGCAACAAAAT 58.770 37.500 0.00 0.00 41.41 1.82
4925 7669 6.386654 GCAAACTAAGCTAGGCAACAAAATA 58.613 36.000 0.00 0.00 41.41 1.40
4926 7670 6.866248 GCAAACTAAGCTAGGCAACAAAATAA 59.134 34.615 0.00 0.00 41.41 1.40
4927 7671 7.545615 GCAAACTAAGCTAGGCAACAAAATAAT 59.454 33.333 0.00 0.00 41.41 1.28
4928 7672 9.423061 CAAACTAAGCTAGGCAACAAAATAATT 57.577 29.630 0.00 0.00 41.41 1.40
4931 7675 8.406297 ACTAAGCTAGGCAACAAAATAATTAGC 58.594 33.333 0.00 0.00 41.41 3.09
4932 7676 6.773976 AGCTAGGCAACAAAATAATTAGCA 57.226 33.333 0.00 0.00 35.83 3.49
4933 7677 7.169158 AGCTAGGCAACAAAATAATTAGCAA 57.831 32.000 0.00 0.00 35.83 3.91
4934 7678 7.260603 AGCTAGGCAACAAAATAATTAGCAAG 58.739 34.615 0.00 0.00 35.83 4.01
4935 7679 6.019559 GCTAGGCAACAAAATAATTAGCAAGC 60.020 38.462 0.00 0.00 41.41 4.01
4936 7680 5.178061 AGGCAACAAAATAATTAGCAAGCC 58.822 37.500 0.00 0.00 41.41 4.35
4937 7681 4.332543 GGCAACAAAATAATTAGCAAGCCC 59.667 41.667 0.00 0.00 0.00 5.19
4938 7682 4.934602 GCAACAAAATAATTAGCAAGCCCA 59.065 37.500 0.00 0.00 0.00 5.36
4939 7683 5.163864 GCAACAAAATAATTAGCAAGCCCAC 60.164 40.000 0.00 0.00 0.00 4.61
4940 7684 5.736951 ACAAAATAATTAGCAAGCCCACA 57.263 34.783 0.00 0.00 0.00 4.17
4941 7685 6.107901 ACAAAATAATTAGCAAGCCCACAA 57.892 33.333 0.00 0.00 0.00 3.33
4942 7686 6.165577 ACAAAATAATTAGCAAGCCCACAAG 58.834 36.000 0.00 0.00 0.00 3.16
4943 7687 4.391405 AATAATTAGCAAGCCCACAAGC 57.609 40.909 0.00 0.00 0.00 4.01
4944 7688 1.631405 AATTAGCAAGCCCACAAGCA 58.369 45.000 0.00 0.00 34.23 3.91
4945 7689 1.856629 ATTAGCAAGCCCACAAGCAT 58.143 45.000 0.00 0.00 34.23 3.79
4946 7690 2.505650 TTAGCAAGCCCACAAGCATA 57.494 45.000 0.00 0.00 34.23 3.14
4947 7691 2.505650 TAGCAAGCCCACAAGCATAA 57.494 45.000 0.00 0.00 34.23 1.90
4948 7692 1.631405 AGCAAGCCCACAAGCATAAA 58.369 45.000 0.00 0.00 34.23 1.40
4949 7693 1.969923 AGCAAGCCCACAAGCATAAAA 59.030 42.857 0.00 0.00 34.23 1.52
4950 7694 2.368221 AGCAAGCCCACAAGCATAAAAA 59.632 40.909 0.00 0.00 34.23 1.94
4951 7695 2.738314 GCAAGCCCACAAGCATAAAAAG 59.262 45.455 0.00 0.00 34.23 2.27
4952 7696 3.328505 CAAGCCCACAAGCATAAAAAGG 58.671 45.455 0.00 0.00 34.23 3.11
4953 7697 2.888212 AGCCCACAAGCATAAAAAGGA 58.112 42.857 0.00 0.00 34.23 3.36
4954 7698 3.238597 AGCCCACAAGCATAAAAAGGAA 58.761 40.909 0.00 0.00 34.23 3.36
4955 7699 3.645687 AGCCCACAAGCATAAAAAGGAAA 59.354 39.130 0.00 0.00 34.23 3.13
4956 7700 3.996363 GCCCACAAGCATAAAAAGGAAAG 59.004 43.478 0.00 0.00 0.00 2.62
4957 7701 4.503123 GCCCACAAGCATAAAAAGGAAAGT 60.503 41.667 0.00 0.00 0.00 2.66
4958 7702 5.279256 GCCCACAAGCATAAAAAGGAAAGTA 60.279 40.000 0.00 0.00 0.00 2.24
4959 7703 6.740122 GCCCACAAGCATAAAAAGGAAAGTAA 60.740 38.462 0.00 0.00 0.00 2.24
4960 7704 7.213678 CCCACAAGCATAAAAAGGAAAGTAAA 58.786 34.615 0.00 0.00 0.00 2.01
4961 7705 7.384932 CCCACAAGCATAAAAAGGAAAGTAAAG 59.615 37.037 0.00 0.00 0.00 1.85
4962 7706 7.926018 CCACAAGCATAAAAAGGAAAGTAAAGT 59.074 33.333 0.00 0.00 0.00 2.66
4963 7707 8.755018 CACAAGCATAAAAAGGAAAGTAAAGTG 58.245 33.333 0.00 0.00 0.00 3.16
4964 7708 8.474831 ACAAGCATAAAAAGGAAAGTAAAGTGT 58.525 29.630 0.00 0.00 0.00 3.55
4965 7709 8.755018 CAAGCATAAAAAGGAAAGTAAAGTGTG 58.245 33.333 0.00 0.00 0.00 3.82
4966 7710 7.433680 AGCATAAAAAGGAAAGTAAAGTGTGG 58.566 34.615 0.00 0.00 0.00 4.17
4967 7711 6.645003 GCATAAAAAGGAAAGTAAAGTGTGGG 59.355 38.462 0.00 0.00 0.00 4.61
4968 7712 7.470841 GCATAAAAAGGAAAGTAAAGTGTGGGA 60.471 37.037 0.00 0.00 0.00 4.37
4969 7713 6.860790 AAAAAGGAAAGTAAAGTGTGGGAA 57.139 33.333 0.00 0.00 0.00 3.97
4970 7714 6.860790 AAAAGGAAAGTAAAGTGTGGGAAA 57.139 33.333 0.00 0.00 0.00 3.13
4971 7715 7.432148 AAAAGGAAAGTAAAGTGTGGGAAAT 57.568 32.000 0.00 0.00 0.00 2.17
4972 7716 6.405278 AAGGAAAGTAAAGTGTGGGAAATG 57.595 37.500 0.00 0.00 0.00 2.32
4973 7717 5.701224 AGGAAAGTAAAGTGTGGGAAATGA 58.299 37.500 0.00 0.00 0.00 2.57
4974 7718 6.314917 AGGAAAGTAAAGTGTGGGAAATGAT 58.685 36.000 0.00 0.00 0.00 2.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 3.194062 TCTATGTGTGTGTGTGTGTGTG 58.806 45.455 0.00 0.00 0.00 3.82
19 20 5.431765 AGGAATTTAGCCTCTATGTGTGTG 58.568 41.667 0.00 0.00 0.00 3.82
20 21 5.700402 AGGAATTTAGCCTCTATGTGTGT 57.300 39.130 0.00 0.00 0.00 3.72
21 22 7.011482 GTGTTAGGAATTTAGCCTCTATGTGTG 59.989 40.741 0.00 0.00 36.96 3.82
22 23 7.048512 GTGTTAGGAATTTAGCCTCTATGTGT 58.951 38.462 0.00 0.00 36.96 3.72
46 47 2.047061 TCAGCTAAACTCCCTGTGTGT 58.953 47.619 0.00 0.00 0.00 3.72
152 155 3.680196 GCCTCCTAACTCTGATGAACCAC 60.680 52.174 0.00 0.00 0.00 4.16
161 164 3.900601 ACCTCATATGCCTCCTAACTCTG 59.099 47.826 0.00 0.00 0.00 3.35
172 175 1.312815 GGAAGCACACCTCATATGCC 58.687 55.000 0.00 0.00 40.33 4.40
183 186 1.746861 CGGCATATCTTGGGAAGCACA 60.747 52.381 0.00 0.00 0.00 4.57
290 293 0.033366 AAAAATGTGAGGCAACCGGC 59.967 50.000 0.00 0.00 43.74 6.13
342 345 4.269844 GCAAATGTTCTCCGCAAAAGAAAA 59.730 37.500 0.00 0.00 34.68 2.29
363 366 8.682710 GGGATAAGTCACTGTAATTAAATTGCA 58.317 33.333 0.00 0.00 33.79 4.08
403 406 8.921205 GGAGGGAGTAAGTCACAGTAATTATTA 58.079 37.037 0.00 0.00 0.00 0.98
404 407 7.417570 CGGAGGGAGTAAGTCACAGTAATTATT 60.418 40.741 0.00 0.00 0.00 1.40
405 408 6.040616 CGGAGGGAGTAAGTCACAGTAATTAT 59.959 42.308 0.00 0.00 0.00 1.28
406 409 5.359009 CGGAGGGAGTAAGTCACAGTAATTA 59.641 44.000 0.00 0.00 0.00 1.40
407 410 4.159879 CGGAGGGAGTAAGTCACAGTAATT 59.840 45.833 0.00 0.00 0.00 1.40
408 411 3.700038 CGGAGGGAGTAAGTCACAGTAAT 59.300 47.826 0.00 0.00 0.00 1.89
409 412 3.087031 CGGAGGGAGTAAGTCACAGTAA 58.913 50.000 0.00 0.00 0.00 2.24
410 413 2.040813 ACGGAGGGAGTAAGTCACAGTA 59.959 50.000 0.00 0.00 0.00 2.74
411 414 1.203025 ACGGAGGGAGTAAGTCACAGT 60.203 52.381 0.00 0.00 0.00 3.55
412 415 1.473278 GACGGAGGGAGTAAGTCACAG 59.527 57.143 0.00 0.00 32.57 3.66
413 416 1.542492 GACGGAGGGAGTAAGTCACA 58.458 55.000 0.00 0.00 32.57 3.58
414 417 0.816373 GGACGGAGGGAGTAAGTCAC 59.184 60.000 0.00 0.00 33.84 3.67
415 418 0.679002 CGGACGGAGGGAGTAAGTCA 60.679 60.000 0.00 0.00 33.84 3.41
416 419 2.002509 GCGGACGGAGGGAGTAAGTC 62.003 65.000 0.00 0.00 0.00 3.01
417 420 2.050934 GCGGACGGAGGGAGTAAGT 61.051 63.158 0.00 0.00 0.00 2.24
418 421 1.601419 TTGCGGACGGAGGGAGTAAG 61.601 60.000 0.00 0.00 0.00 2.34
419 422 1.186917 TTTGCGGACGGAGGGAGTAA 61.187 55.000 0.00 0.00 0.00 2.24
420 423 0.974010 ATTTGCGGACGGAGGGAGTA 60.974 55.000 0.00 0.00 0.00 2.59
421 424 0.974010 TATTTGCGGACGGAGGGAGT 60.974 55.000 0.00 0.00 0.00 3.85
422 425 0.177141 TTATTTGCGGACGGAGGGAG 59.823 55.000 0.00 0.00 0.00 4.30
423 426 0.177141 CTTATTTGCGGACGGAGGGA 59.823 55.000 0.00 0.00 0.00 4.20
424 427 0.107848 ACTTATTTGCGGACGGAGGG 60.108 55.000 0.00 0.00 0.00 4.30
425 428 1.006832 CACTTATTTGCGGACGGAGG 58.993 55.000 0.00 0.00 0.00 4.30
426 429 1.722011 ACACTTATTTGCGGACGGAG 58.278 50.000 0.00 0.00 0.00 4.63
427 430 2.231964 AGTACACTTATTTGCGGACGGA 59.768 45.455 0.00 0.00 0.00 4.69
428 431 2.613691 AGTACACTTATTTGCGGACGG 58.386 47.619 0.00 0.00 0.00 4.79
429 432 3.924686 AGAAGTACACTTATTTGCGGACG 59.075 43.478 0.00 0.00 36.11 4.79
430 433 5.004156 CGTAGAAGTACACTTATTTGCGGAC 59.996 44.000 0.00 0.00 36.11 4.79
431 434 5.097529 CGTAGAAGTACACTTATTTGCGGA 58.902 41.667 0.00 0.00 36.11 5.54
432 435 4.860907 ACGTAGAAGTACACTTATTTGCGG 59.139 41.667 0.00 0.00 36.11 5.69
433 436 6.385537 AACGTAGAAGTACACTTATTTGCG 57.614 37.500 0.00 2.93 36.11 4.85
434 437 7.059147 GCAAAACGTAGAAGTACACTTATTTGC 59.941 37.037 8.30 8.30 36.11 3.68
435 438 8.280497 AGCAAAACGTAGAAGTACACTTATTTG 58.720 33.333 0.00 0.00 36.11 2.32
436 439 8.374327 AGCAAAACGTAGAAGTACACTTATTT 57.626 30.769 0.00 0.00 36.11 1.40
437 440 7.871463 AGAGCAAAACGTAGAAGTACACTTATT 59.129 33.333 0.00 0.00 36.11 1.40
438 441 7.376615 AGAGCAAAACGTAGAAGTACACTTAT 58.623 34.615 0.00 0.00 36.11 1.73
439 442 6.742109 AGAGCAAAACGTAGAAGTACACTTA 58.258 36.000 0.00 0.00 36.11 2.24
440 443 5.598769 AGAGCAAAACGTAGAAGTACACTT 58.401 37.500 0.00 0.00 39.23 3.16
441 444 5.197682 AGAGCAAAACGTAGAAGTACACT 57.802 39.130 0.00 0.00 0.00 3.55
442 445 6.640092 ACTTAGAGCAAAACGTAGAAGTACAC 59.360 38.462 0.00 0.00 0.00 2.90
443 446 6.742109 ACTTAGAGCAAAACGTAGAAGTACA 58.258 36.000 0.00 0.00 0.00 2.90
444 447 6.860023 TGACTTAGAGCAAAACGTAGAAGTAC 59.140 38.462 0.00 0.00 0.00 2.73
445 448 6.973843 TGACTTAGAGCAAAACGTAGAAGTA 58.026 36.000 0.00 0.00 0.00 2.24
446 449 5.839621 TGACTTAGAGCAAAACGTAGAAGT 58.160 37.500 0.00 0.00 0.00 3.01
447 450 6.764877 TTGACTTAGAGCAAAACGTAGAAG 57.235 37.500 0.00 0.00 0.00 2.85
448 451 6.759827 ACTTTGACTTAGAGCAAAACGTAGAA 59.240 34.615 0.00 0.00 34.01 2.10
449 452 6.278363 ACTTTGACTTAGAGCAAAACGTAGA 58.722 36.000 0.00 0.00 34.01 2.59
450 453 6.526566 ACTTTGACTTAGAGCAAAACGTAG 57.473 37.500 0.00 0.00 34.01 3.51
451 454 6.913873 AACTTTGACTTAGAGCAAAACGTA 57.086 33.333 0.00 0.00 34.01 3.57
452 455 5.813080 AACTTTGACTTAGAGCAAAACGT 57.187 34.783 6.52 0.00 34.01 3.99
453 456 8.609478 TTAAAACTTTGACTTAGAGCAAAACG 57.391 30.769 6.52 0.00 34.01 3.60
540 543 6.753897 AGATTCGTTTTGAAATGCACTTTC 57.246 33.333 12.10 12.10 43.05 2.62
541 544 6.534793 ACAAGATTCGTTTTGAAATGCACTTT 59.465 30.769 0.00 0.00 40.71 2.66
542 545 6.019640 CACAAGATTCGTTTTGAAATGCACTT 60.020 34.615 0.00 0.00 40.71 3.16
543 546 5.459762 CACAAGATTCGTTTTGAAATGCACT 59.540 36.000 0.00 0.00 40.71 4.40
544 547 5.458452 TCACAAGATTCGTTTTGAAATGCAC 59.542 36.000 0.00 0.00 40.71 4.57
545 548 5.586339 TCACAAGATTCGTTTTGAAATGCA 58.414 33.333 0.00 0.00 40.71 3.96
546 549 6.695292 ATCACAAGATTCGTTTTGAAATGC 57.305 33.333 0.00 0.00 40.71 3.56
547 550 8.955061 AGTATCACAAGATTCGTTTTGAAATG 57.045 30.769 0.00 0.00 40.71 2.32
549 552 9.268268 AGTAGTATCACAAGATTCGTTTTGAAA 57.732 29.630 0.00 0.00 40.71 2.69
550 553 8.827177 AGTAGTATCACAAGATTCGTTTTGAA 57.173 30.769 0.00 0.00 41.81 2.69
551 554 8.827177 AAGTAGTATCACAAGATTCGTTTTGA 57.173 30.769 0.00 0.00 35.67 2.69
554 557 9.924650 ACTAAAGTAGTATCACAAGATTCGTTT 57.075 29.630 0.00 0.00 37.23 3.60
555 558 9.355215 CACTAAAGTAGTATCACAAGATTCGTT 57.645 33.333 0.00 0.00 37.23 3.85
556 559 7.488471 GCACTAAAGTAGTATCACAAGATTCGT 59.512 37.037 0.00 0.00 37.23 3.85
557 560 7.043325 GGCACTAAAGTAGTATCACAAGATTCG 60.043 40.741 0.00 0.00 37.23 3.34
558 561 7.764443 TGGCACTAAAGTAGTATCACAAGATTC 59.236 37.037 0.00 0.00 37.23 2.52
559 562 7.620880 TGGCACTAAAGTAGTATCACAAGATT 58.379 34.615 0.00 0.00 37.23 2.40
560 563 7.182817 TGGCACTAAAGTAGTATCACAAGAT 57.817 36.000 0.00 0.00 37.23 2.40
561 564 6.599356 TGGCACTAAAGTAGTATCACAAGA 57.401 37.500 0.00 0.00 37.23 3.02
562 565 8.942338 TTATGGCACTAAAGTAGTATCACAAG 57.058 34.615 0.00 0.00 37.23 3.16
563 566 9.899661 ATTTATGGCACTAAAGTAGTATCACAA 57.100 29.630 0.00 0.00 37.23 3.33
564 567 9.325198 CATTTATGGCACTAAAGTAGTATCACA 57.675 33.333 0.00 0.00 37.23 3.58
565 568 8.283291 GCATTTATGGCACTAAAGTAGTATCAC 58.717 37.037 0.00 0.00 37.23 3.06
566 569 8.210946 AGCATTTATGGCACTAAAGTAGTATCA 58.789 33.333 0.00 0.00 37.23 2.15
567 570 8.499162 CAGCATTTATGGCACTAAAGTAGTATC 58.501 37.037 0.00 0.00 37.23 2.24
568 571 7.041098 GCAGCATTTATGGCACTAAAGTAGTAT 60.041 37.037 0.00 0.00 37.23 2.12
569 572 6.260050 GCAGCATTTATGGCACTAAAGTAGTA 59.740 38.462 0.00 0.00 37.23 1.82
570 573 5.066505 GCAGCATTTATGGCACTAAAGTAGT 59.933 40.000 0.00 0.00 40.28 2.73
571 574 5.066375 TGCAGCATTTATGGCACTAAAGTAG 59.934 40.000 0.00 0.00 0.00 2.57
572 575 4.946772 TGCAGCATTTATGGCACTAAAGTA 59.053 37.500 0.00 0.00 0.00 2.24
573 576 3.763360 TGCAGCATTTATGGCACTAAAGT 59.237 39.130 0.00 0.00 0.00 2.66
574 577 4.374843 TGCAGCATTTATGGCACTAAAG 57.625 40.909 0.00 0.00 0.00 1.85
575 578 4.220382 AGTTGCAGCATTTATGGCACTAAA 59.780 37.500 2.55 0.00 35.74 1.85
576 579 3.763360 AGTTGCAGCATTTATGGCACTAA 59.237 39.130 2.55 0.00 35.74 2.24
577 580 3.355378 AGTTGCAGCATTTATGGCACTA 58.645 40.909 2.55 0.00 35.74 2.74
578 581 2.173519 AGTTGCAGCATTTATGGCACT 58.826 42.857 2.55 0.00 35.74 4.40
579 582 2.660189 AGTTGCAGCATTTATGGCAC 57.340 45.000 2.55 0.00 35.74 5.01
580 583 3.681593 AAAGTTGCAGCATTTATGGCA 57.318 38.095 2.55 0.00 0.00 4.92
581 584 3.371898 GGAAAAGTTGCAGCATTTATGGC 59.628 43.478 3.69 0.00 0.00 4.40
582 585 4.628333 CAGGAAAAGTTGCAGCATTTATGG 59.372 41.667 3.69 0.00 0.00 2.74
583 586 5.472148 TCAGGAAAAGTTGCAGCATTTATG 58.528 37.500 3.69 6.66 0.00 1.90
584 587 5.726980 TCAGGAAAAGTTGCAGCATTTAT 57.273 34.783 3.69 0.00 0.00 1.40
585 588 5.726980 ATCAGGAAAAGTTGCAGCATTTA 57.273 34.783 3.69 0.00 0.00 1.40
586 589 4.612264 ATCAGGAAAAGTTGCAGCATTT 57.388 36.364 3.31 3.31 0.00 2.32
587 590 5.726980 TTATCAGGAAAAGTTGCAGCATT 57.273 34.783 2.55 0.00 0.00 3.56
588 591 5.244626 ACTTTATCAGGAAAAGTTGCAGCAT 59.755 36.000 2.55 0.00 42.97 3.79
589 592 4.584325 ACTTTATCAGGAAAAGTTGCAGCA 59.416 37.500 2.55 0.00 42.97 4.41
590 593 5.126396 ACTTTATCAGGAAAAGTTGCAGC 57.874 39.130 0.00 0.00 42.97 5.25
596 599 8.218488 ACTTGGACTAACTTTATCAGGAAAAGT 58.782 33.333 0.00 0.00 46.45 2.66
597 600 8.622948 ACTTGGACTAACTTTATCAGGAAAAG 57.377 34.615 0.00 0.00 39.38 2.27
598 601 8.990163 AACTTGGACTAACTTTATCAGGAAAA 57.010 30.769 0.00 0.00 0.00 2.29
599 602 8.990163 AAACTTGGACTAACTTTATCAGGAAA 57.010 30.769 0.00 0.00 0.00 3.13
600 603 8.846211 CAAAACTTGGACTAACTTTATCAGGAA 58.154 33.333 0.00 0.00 0.00 3.36
601 604 8.215050 TCAAAACTTGGACTAACTTTATCAGGA 58.785 33.333 0.00 0.00 0.00 3.86
602 605 8.290325 GTCAAAACTTGGACTAACTTTATCAGG 58.710 37.037 0.00 0.00 0.00 3.86
603 606 9.057089 AGTCAAAACTTGGACTAACTTTATCAG 57.943 33.333 0.00 0.00 42.30 2.90
604 607 8.974060 AGTCAAAACTTGGACTAACTTTATCA 57.026 30.769 0.00 0.00 42.30 2.15
607 610 9.333724 CCTAAGTCAAAACTTGGACTAACTTTA 57.666 33.333 0.00 0.00 44.40 1.85
608 611 8.050930 TCCTAAGTCAAAACTTGGACTAACTTT 58.949 33.333 0.00 0.00 44.40 2.66
609 612 7.498239 GTCCTAAGTCAAAACTTGGACTAACTT 59.502 37.037 20.50 0.00 46.55 2.66
610 613 6.990939 GTCCTAAGTCAAAACTTGGACTAACT 59.009 38.462 20.50 1.01 46.55 2.24
611 614 7.187244 GTCCTAAGTCAAAACTTGGACTAAC 57.813 40.000 20.50 5.26 46.55 2.34
616 619 4.781775 TGGTCCTAAGTCAAAACTTGGA 57.218 40.909 3.56 4.84 44.40 3.53
617 620 5.221244 CCTTTGGTCCTAAGTCAAAACTTGG 60.221 44.000 11.48 0.00 45.37 3.61
618 621 5.359860 ACCTTTGGTCCTAAGTCAAAACTTG 59.640 40.000 11.48 0.00 45.37 3.16
619 622 6.665695 TACCTTTGGTCCTAAGTCAAAACTT 58.334 36.000 11.48 0.00 41.84 2.66
620 623 5.125367 ACCTTTGGTCCTAAGTCAAAACT 57.875 39.130 11.48 0.00 37.32 2.66
621 624 6.293698 TCTACCTTTGGTCCTAAGTCAAAAC 58.706 40.000 11.48 0.00 37.09 2.43
622 625 6.503560 TCTACCTTTGGTCCTAAGTCAAAA 57.496 37.500 11.48 0.00 37.09 2.44
623 626 6.043938 ACATCTACCTTTGGTCCTAAGTCAAA 59.956 38.462 11.48 0.00 37.09 2.69
624 627 5.546499 ACATCTACCTTTGGTCCTAAGTCAA 59.454 40.000 11.48 0.00 37.09 3.18
625 628 5.091552 ACATCTACCTTTGGTCCTAAGTCA 58.908 41.667 11.48 0.00 37.09 3.41
626 629 5.678955 ACATCTACCTTTGGTCCTAAGTC 57.321 43.478 11.48 0.00 37.09 3.01
627 630 6.021030 TGTACATCTACCTTTGGTCCTAAGT 58.979 40.000 11.48 3.66 37.09 2.24
628 631 6.154706 AGTGTACATCTACCTTTGGTCCTAAG 59.845 42.308 0.00 6.12 37.09 2.18
629 632 6.021030 AGTGTACATCTACCTTTGGTCCTAA 58.979 40.000 0.00 0.00 37.09 2.69
630 633 5.586877 AGTGTACATCTACCTTTGGTCCTA 58.413 41.667 0.00 0.00 37.09 2.94
631 634 4.426704 AGTGTACATCTACCTTTGGTCCT 58.573 43.478 0.00 0.00 37.09 3.85
632 635 4.820894 AGTGTACATCTACCTTTGGTCC 57.179 45.455 0.00 0.00 37.09 4.46
633 636 8.038944 TGAATAAGTGTACATCTACCTTTGGTC 58.961 37.037 0.00 0.00 37.09 4.02
634 637 7.822822 GTGAATAAGTGTACATCTACCTTTGGT 59.177 37.037 0.00 0.00 40.16 3.67
635 638 7.010183 CGTGAATAAGTGTACATCTACCTTTGG 59.990 40.741 0.00 0.00 0.00 3.28
636 639 7.010183 CCGTGAATAAGTGTACATCTACCTTTG 59.990 40.741 0.00 0.00 0.00 2.77
637 640 7.039882 CCGTGAATAAGTGTACATCTACCTTT 58.960 38.462 0.00 0.00 0.00 3.11
638 641 6.379133 TCCGTGAATAAGTGTACATCTACCTT 59.621 38.462 0.00 0.00 0.00 3.50
639 642 5.889853 TCCGTGAATAAGTGTACATCTACCT 59.110 40.000 0.00 0.00 0.00 3.08
640 643 5.975939 GTCCGTGAATAAGTGTACATCTACC 59.024 44.000 0.00 0.00 0.00 3.18
641 644 5.680229 CGTCCGTGAATAAGTGTACATCTAC 59.320 44.000 0.00 0.00 0.00 2.59
642 645 5.220912 CCGTCCGTGAATAAGTGTACATCTA 60.221 44.000 0.00 0.00 0.00 1.98
643 646 4.439700 CCGTCCGTGAATAAGTGTACATCT 60.440 45.833 0.00 0.00 0.00 2.90
644 647 3.795101 CCGTCCGTGAATAAGTGTACATC 59.205 47.826 0.00 0.00 0.00 3.06
645 648 3.444742 TCCGTCCGTGAATAAGTGTACAT 59.555 43.478 0.00 0.00 0.00 2.29
646 649 2.819019 TCCGTCCGTGAATAAGTGTACA 59.181 45.455 0.00 0.00 0.00 2.90
647 650 3.432782 CTCCGTCCGTGAATAAGTGTAC 58.567 50.000 0.00 0.00 0.00 2.90
648 651 2.424601 CCTCCGTCCGTGAATAAGTGTA 59.575 50.000 0.00 0.00 0.00 2.90
649 652 1.203994 CCTCCGTCCGTGAATAAGTGT 59.796 52.381 0.00 0.00 0.00 3.55
650 653 1.470979 CCCTCCGTCCGTGAATAAGTG 60.471 57.143 0.00 0.00 0.00 3.16
651 654 0.822164 CCCTCCGTCCGTGAATAAGT 59.178 55.000 0.00 0.00 0.00 2.24
652 655 1.067212 CTCCCTCCGTCCGTGAATAAG 59.933 57.143 0.00 0.00 0.00 1.73
653 656 1.108776 CTCCCTCCGTCCGTGAATAA 58.891 55.000 0.00 0.00 0.00 1.40
654 657 0.033796 ACTCCCTCCGTCCGTGAATA 60.034 55.000 0.00 0.00 0.00 1.75
655 658 0.033796 TACTCCCTCCGTCCGTGAAT 60.034 55.000 0.00 0.00 0.00 2.57
656 659 0.033796 ATACTCCCTCCGTCCGTGAA 60.034 55.000 0.00 0.00 0.00 3.18
657 660 0.750546 CATACTCCCTCCGTCCGTGA 60.751 60.000 0.00 0.00 0.00 4.35
658 661 0.750546 TCATACTCCCTCCGTCCGTG 60.751 60.000 0.00 0.00 0.00 4.94
659 662 0.465824 CTCATACTCCCTCCGTCCGT 60.466 60.000 0.00 0.00 0.00 4.69
660 663 0.465824 ACTCATACTCCCTCCGTCCG 60.466 60.000 0.00 0.00 0.00 4.79
661 664 1.033574 CACTCATACTCCCTCCGTCC 58.966 60.000 0.00 0.00 0.00 4.79
662 665 1.950909 CTCACTCATACTCCCTCCGTC 59.049 57.143 0.00 0.00 0.00 4.79
663 666 2.024825 GCTCACTCATACTCCCTCCGT 61.025 57.143 0.00 0.00 0.00 4.69
664 667 0.671251 GCTCACTCATACTCCCTCCG 59.329 60.000 0.00 0.00 0.00 4.63
665 668 2.080654 AGCTCACTCATACTCCCTCC 57.919 55.000 0.00 0.00 0.00 4.30
666 669 2.482839 GCAAGCTCACTCATACTCCCTC 60.483 54.545 0.00 0.00 0.00 4.30
667 670 1.484240 GCAAGCTCACTCATACTCCCT 59.516 52.381 0.00 0.00 0.00 4.20
668 671 1.484240 AGCAAGCTCACTCATACTCCC 59.516 52.381 0.00 0.00 0.00 4.30
669 672 2.548875 CAGCAAGCTCACTCATACTCC 58.451 52.381 0.00 0.00 0.00 3.85
670 673 2.093764 ACCAGCAAGCTCACTCATACTC 60.094 50.000 0.00 0.00 0.00 2.59
671 674 1.905215 ACCAGCAAGCTCACTCATACT 59.095 47.619 0.00 0.00 0.00 2.12
672 675 2.393271 ACCAGCAAGCTCACTCATAC 57.607 50.000 0.00 0.00 0.00 2.39
688 691 4.585879 GCAAACCAGAAGTAAGGATACCA 58.414 43.478 0.00 0.00 32.08 3.25
696 699 2.633967 TCCCTACGCAAACCAGAAGTAA 59.366 45.455 0.00 0.00 0.00 2.24
701 704 1.271856 TCATCCCTACGCAAACCAGA 58.728 50.000 0.00 0.00 0.00 3.86
711 714 8.409358 AAATGGCATATTAAGTTCATCCCTAC 57.591 34.615 0.00 0.00 0.00 3.18
752 757 2.029020 GGCCCCACAATGTCTTCTTTTC 60.029 50.000 0.00 0.00 0.00 2.29
1270 1287 3.324930 TGCAGTGCTGGGGGAGAG 61.325 66.667 17.60 0.00 0.00 3.20
1289 1313 4.174129 GTATGCGGTGCCGTTGCC 62.174 66.667 12.46 0.00 42.09 4.52
1293 1317 2.112198 CAATGGTATGCGGTGCCGT 61.112 57.895 12.46 0.00 42.09 5.68
1619 1668 3.308014 GAGGACCTTGCTCTGCGCT 62.308 63.158 9.73 0.00 40.11 5.92
2376 4465 2.672996 AACACGAGGGCCATGCAC 60.673 61.111 6.18 0.00 0.00 4.57
2797 5423 7.351414 TGTCGCAGAATCATAGCATAAATAC 57.649 36.000 0.00 0.00 39.69 1.89
2850 5487 3.523157 CCAGCCCAAATCCCCTAAAATTT 59.477 43.478 0.00 0.00 0.00 1.82
2966 5605 6.880942 ATGAAAAACATGGTGAAATTTGGG 57.119 33.333 0.00 0.00 37.87 4.12
3058 5700 8.006298 TGAGTTATTAAATTGGTGCCTAATGG 57.994 34.615 0.00 0.00 0.00 3.16
3204 5850 0.676782 AAGGTTGATCCGCCTTTCCG 60.677 55.000 10.95 0.00 41.93 4.30
3216 5862 1.820519 GATGCAGATGCCAAAGGTTGA 59.179 47.619 1.72 0.00 41.18 3.18
3222 5868 2.516906 TCAACTGATGCAGATGCCAAA 58.483 42.857 1.72 0.00 41.18 3.28
3223 5869 2.203470 TCAACTGATGCAGATGCCAA 57.797 45.000 1.72 0.00 41.18 4.52
3237 5883 1.819928 TATGGTTGCGTGCATCAACT 58.180 45.000 24.38 14.17 42.40 3.16
3279 5925 4.099266 ACATTGTTGTTAGGCTTTGCTTGA 59.901 37.500 0.00 0.00 29.55 3.02
3281 5927 4.620982 GACATTGTTGTTAGGCTTTGCTT 58.379 39.130 0.00 0.00 35.79 3.91
3293 5939 4.378046 GGCTAATTCGTTCGACATTGTTGT 60.378 41.667 3.98 0.00 39.32 3.32
3298 5944 6.730960 TTTAAGGCTAATTCGTTCGACATT 57.269 33.333 0.00 2.08 0.00 2.71
3327 5976 0.846427 TCCCTTCTGTGGATGGCCTT 60.846 55.000 3.32 0.00 35.99 4.35
3338 5987 0.254178 CATGAGGTGGGTCCCTTCTG 59.746 60.000 10.00 2.13 34.03 3.02
3343 5992 0.625849 ATTGTCATGAGGTGGGTCCC 59.374 55.000 0.00 0.00 36.75 4.46
3356 6005 3.611025 AGGTTTGGGGAGAAATTGTCA 57.389 42.857 0.00 0.00 0.00 3.58
3362 6011 3.955524 TGTTGTAGGTTTGGGGAGAAA 57.044 42.857 0.00 0.00 0.00 2.52
3363 6012 3.955524 TTGTTGTAGGTTTGGGGAGAA 57.044 42.857 0.00 0.00 0.00 2.87
3392 6043 3.471680 TGTTCATTGTTCGGACACATGA 58.528 40.909 14.11 14.11 34.98 3.07
3400 6051 6.262601 AGTAGTGTTTTTGTTCATTGTTCGG 58.737 36.000 0.00 0.00 0.00 4.30
3402 6053 6.964934 ACGAGTAGTGTTTTTGTTCATTGTTC 59.035 34.615 0.00 0.00 0.00 3.18
3408 6059 5.981315 CCTCTACGAGTAGTGTTTTTGTTCA 59.019 40.000 9.75 0.00 34.84 3.18
3424 6075 4.099573 CCTTAATGAAGGCTTCCTCTACGA 59.900 45.833 23.68 4.22 45.91 3.43
3442 6093 2.477375 GACGCGTGTTGTGATTCCTTAA 59.523 45.455 20.70 0.00 0.00 1.85
3459 6110 3.554692 CCGCCGACATTGAGACGC 61.555 66.667 0.00 0.00 34.08 5.19
3462 6113 1.326951 TGGATCCGCCGACATTGAGA 61.327 55.000 7.39 0.00 40.66 3.27
3463 6114 0.461870 TTGGATCCGCCGACATTGAG 60.462 55.000 7.39 0.00 40.66 3.02
3473 6124 2.653557 AACCTTTGGTTGGATCCGC 58.346 52.632 7.39 2.16 45.07 5.54
3534 6185 5.383984 TTCGACGACAATTATGTGCATAC 57.616 39.130 0.00 0.00 40.74 2.39
3535 6186 5.751028 TCATTCGACGACAATTATGTGCATA 59.249 36.000 0.00 0.00 40.74 3.14
3536 6187 4.570369 TCATTCGACGACAATTATGTGCAT 59.430 37.500 0.00 0.00 40.74 3.96
3632 6325 4.141574 GCATGGGTGGTACTAGTATTTGGA 60.142 45.833 5.75 0.00 0.00 3.53
3639 6332 1.968050 GCGGCATGGGTGGTACTAGT 61.968 60.000 0.00 0.00 0.00 2.57
3640 6333 1.227556 GCGGCATGGGTGGTACTAG 60.228 63.158 0.00 0.00 0.00 2.57
3641 6334 1.687840 AGCGGCATGGGTGGTACTA 60.688 57.895 1.45 0.00 0.00 1.82
3642 6335 3.009115 AGCGGCATGGGTGGTACT 61.009 61.111 1.45 0.00 0.00 2.73
3643 6336 2.824041 CAGCGGCATGGGTGGTAC 60.824 66.667 1.45 0.00 0.00 3.34
3644 6337 4.794648 GCAGCGGCATGGGTGGTA 62.795 66.667 3.18 0.00 40.72 3.25
3738 6431 2.312390 GAGTGTCCCTATCTCCCTCAC 58.688 57.143 0.00 0.00 0.00 3.51
3981 6675 6.521151 AAGAGGGAGATAAACAAATGCTTG 57.479 37.500 0.00 0.00 38.61 4.01
4110 6844 6.894339 TGTCTATTCAGGCTCATAACGATA 57.106 37.500 0.00 0.00 0.00 2.92
4147 6888 8.049117 TCAGATAATAGAACAAACTTCTGGCAT 58.951 33.333 0.00 0.00 32.27 4.40
4178 6919 4.437239 AGTTCAGTTCCGCTCATGATAAG 58.563 43.478 0.00 0.00 0.00 1.73
4195 6936 6.389091 CAACATTTTAGCAGGCAATAGTTCA 58.611 36.000 0.00 0.00 0.00 3.18
4276 7017 4.523083 TCTGCTTTTTACCAAGTGACTGT 58.477 39.130 0.00 0.00 0.00 3.55
4351 7092 2.933878 AAGTTTGGTCGCCGTGCAGA 62.934 55.000 0.00 0.00 0.00 4.26
4412 7156 5.637387 GGTGTGTTTTGTGTTTCTGATTTGT 59.363 36.000 0.00 0.00 0.00 2.83
4417 7161 3.057174 GTGGGTGTGTTTTGTGTTTCTGA 60.057 43.478 0.00 0.00 0.00 3.27
4420 7164 2.255316 CGTGGGTGTGTTTTGTGTTTC 58.745 47.619 0.00 0.00 0.00 2.78
4440 7184 1.148498 CCAGGCGGATAGGGTTTCC 59.852 63.158 0.00 0.00 0.00 3.13
4441 7185 1.125633 TACCAGGCGGATAGGGTTTC 58.874 55.000 2.43 0.00 34.88 2.78
4442 7186 1.815757 ATACCAGGCGGATAGGGTTT 58.184 50.000 2.43 0.00 34.88 3.27
4448 7192 2.611971 GCGATGAAATACCAGGCGGATA 60.612 50.000 2.43 0.00 35.59 2.59
4459 7203 1.448497 GGACGGGGGCGATGAAATA 59.552 57.895 0.00 0.00 0.00 1.40
4475 7219 4.285790 AGGCAAGGTGGGGAGGGA 62.286 66.667 0.00 0.00 0.00 4.20
4493 7237 3.934391 GAGGTGGTGGCCGTCTTCG 62.934 68.421 0.00 0.00 0.00 3.79
4507 7251 4.143333 CGACGGAATGGCGGAGGT 62.143 66.667 0.00 0.00 0.00 3.85
4508 7252 4.143333 ACGACGGAATGGCGGAGG 62.143 66.667 0.00 0.00 0.00 4.30
4546 7290 1.608336 ATCTCGACCGGTGGGAACA 60.608 57.895 14.63 0.00 36.97 3.18
4602 7346 2.810012 GAAATCGGCGACTTCGGGC 61.810 63.158 15.57 0.00 40.23 6.13
4687 7431 4.436998 CTCTCGTGGTGGTCGCCC 62.437 72.222 0.00 0.00 0.00 6.13
4706 7450 0.033504 AACTCAGCGATGGTCGTGTT 59.966 50.000 0.00 0.00 42.81 3.32
4735 7479 0.601046 CGAGTGCCAAGAACTCAGCA 60.601 55.000 3.70 0.00 43.53 4.41
4736 7480 1.294659 CCGAGTGCCAAGAACTCAGC 61.295 60.000 3.70 0.00 43.53 4.26
4737 7481 0.671781 CCCGAGTGCCAAGAACTCAG 60.672 60.000 3.70 0.00 43.53 3.35
4738 7482 1.371183 CCCGAGTGCCAAGAACTCA 59.629 57.895 3.70 0.00 43.53 3.41
4739 7483 2.035442 GCCCGAGTGCCAAGAACTC 61.035 63.158 0.00 0.00 40.59 3.01
4740 7484 2.032681 GCCCGAGTGCCAAGAACT 59.967 61.111 0.00 0.00 0.00 3.01
4741 7485 3.423154 CGCCCGAGTGCCAAGAAC 61.423 66.667 0.00 0.00 0.00 3.01
4742 7486 4.697756 CCGCCCGAGTGCCAAGAA 62.698 66.667 0.00 0.00 0.00 2.52
4760 7504 4.796231 AACTCTGGCGGCGCTACG 62.796 66.667 32.30 18.97 0.00 3.51
4761 7505 3.188786 CAACTCTGGCGGCGCTAC 61.189 66.667 32.30 16.79 0.00 3.58
4762 7506 4.451150 CCAACTCTGGCGGCGCTA 62.451 66.667 32.30 25.92 35.39 4.26
4765 7509 4.379243 AGTCCAACTCTGGCGGCG 62.379 66.667 0.51 0.51 43.17 6.46
4766 7510 2.435059 GAGTCCAACTCTGGCGGC 60.435 66.667 0.00 0.00 41.88 6.53
4767 7511 0.460987 GATGAGTCCAACTCTGGCGG 60.461 60.000 8.44 0.00 45.27 6.13
4768 7512 0.460987 GGATGAGTCCAACTCTGGCG 60.461 60.000 8.44 0.00 45.27 5.69
4769 7513 3.467776 GGATGAGTCCAACTCTGGC 57.532 57.895 8.44 0.00 45.27 4.85
4778 7522 1.303282 GGGTGTTGGGGATGAGTCC 59.697 63.158 0.00 0.00 44.29 3.85
4779 7523 1.208165 AGGGGTGTTGGGGATGAGTC 61.208 60.000 0.00 0.00 0.00 3.36
4780 7524 0.120377 TAGGGGTGTTGGGGATGAGT 59.880 55.000 0.00 0.00 0.00 3.41
4781 7525 1.212935 CTTAGGGGTGTTGGGGATGAG 59.787 57.143 0.00 0.00 0.00 2.90
4782 7526 1.295020 CTTAGGGGTGTTGGGGATGA 58.705 55.000 0.00 0.00 0.00 2.92
4783 7527 0.258774 CCTTAGGGGTGTTGGGGATG 59.741 60.000 0.00 0.00 0.00 3.51
4784 7528 1.580994 GCCTTAGGGGTGTTGGGGAT 61.581 60.000 0.00 0.00 37.43 3.85
4785 7529 2.235761 GCCTTAGGGGTGTTGGGGA 61.236 63.158 0.00 0.00 37.43 4.81
4786 7530 2.359011 GCCTTAGGGGTGTTGGGG 59.641 66.667 0.00 0.00 37.43 4.96
4787 7531 1.800229 AAGGCCTTAGGGGTGTTGGG 61.800 60.000 18.87 0.00 37.43 4.12
4788 7532 0.114364 AAAGGCCTTAGGGGTGTTGG 59.886 55.000 20.84 0.00 37.43 3.77
4789 7533 1.256812 CAAAGGCCTTAGGGGTGTTG 58.743 55.000 20.84 6.80 37.43 3.33
4790 7534 0.541998 GCAAAGGCCTTAGGGGTGTT 60.542 55.000 20.84 0.00 37.43 3.32
4791 7535 1.076727 GCAAAGGCCTTAGGGGTGT 59.923 57.895 20.84 0.00 37.43 4.16
4792 7536 4.018409 GCAAAGGCCTTAGGGGTG 57.982 61.111 20.84 14.24 37.43 4.61
4810 7554 3.420482 GTCATGTGGGGGAGGGGG 61.420 72.222 0.00 0.00 0.00 5.40
4811 7555 3.797353 CGTCATGTGGGGGAGGGG 61.797 72.222 0.00 0.00 0.00 4.79
4812 7556 4.489771 GCGTCATGTGGGGGAGGG 62.490 72.222 0.00 0.00 0.00 4.30
4813 7557 2.556840 AATGCGTCATGTGGGGGAGG 62.557 60.000 0.00 0.00 0.00 4.30
4814 7558 0.680921 AAATGCGTCATGTGGGGGAG 60.681 55.000 0.00 0.00 0.00 4.30
4815 7559 0.679640 GAAATGCGTCATGTGGGGGA 60.680 55.000 0.00 0.00 0.00 4.81
4816 7560 1.666209 GGAAATGCGTCATGTGGGGG 61.666 60.000 0.00 0.00 0.00 5.40
4817 7561 0.680921 AGGAAATGCGTCATGTGGGG 60.681 55.000 0.00 0.00 0.00 4.96
4818 7562 1.942657 CTAGGAAATGCGTCATGTGGG 59.057 52.381 0.00 0.00 0.00 4.61
4819 7563 2.609459 GTCTAGGAAATGCGTCATGTGG 59.391 50.000 0.00 0.00 0.00 4.17
4820 7564 2.282555 CGTCTAGGAAATGCGTCATGTG 59.717 50.000 0.00 0.00 0.00 3.21
4821 7565 2.540515 CGTCTAGGAAATGCGTCATGT 58.459 47.619 0.00 0.00 0.00 3.21
4822 7566 1.860950 CCGTCTAGGAAATGCGTCATG 59.139 52.381 0.00 0.00 45.00 3.07
4823 7567 1.806623 GCCGTCTAGGAAATGCGTCAT 60.807 52.381 0.00 0.00 45.00 3.06
4824 7568 0.459585 GCCGTCTAGGAAATGCGTCA 60.460 55.000 0.00 0.00 45.00 4.35
4825 7569 1.152383 GGCCGTCTAGGAAATGCGTC 61.152 60.000 0.00 0.00 45.00 5.19
4826 7570 1.153429 GGCCGTCTAGGAAATGCGT 60.153 57.895 0.00 0.00 45.00 5.24
4827 7571 2.237751 CGGCCGTCTAGGAAATGCG 61.238 63.158 19.50 0.00 45.00 4.73
4828 7572 1.887707 CCGGCCGTCTAGGAAATGC 60.888 63.158 26.12 0.00 45.00 3.56
4829 7573 0.810031 CACCGGCCGTCTAGGAAATG 60.810 60.000 26.12 6.79 45.00 2.32
4830 7574 1.520666 CACCGGCCGTCTAGGAAAT 59.479 57.895 26.12 0.00 45.00 2.17
4831 7575 2.652095 CCACCGGCCGTCTAGGAAA 61.652 63.158 26.12 0.00 45.00 3.13
4832 7576 3.072468 CCACCGGCCGTCTAGGAA 61.072 66.667 26.12 0.00 45.00 3.36
4851 7595 4.271816 CTCATCGGGGGCGAGACG 62.272 72.222 0.00 0.00 0.00 4.18
4852 7596 4.593864 GCTCATCGGGGGCGAGAC 62.594 72.222 0.00 0.00 0.00 3.36
4853 7597 3.430907 TAGCTCATCGGGGGCGAGA 62.431 63.158 0.00 0.00 0.00 4.04
4854 7598 2.912542 TAGCTCATCGGGGGCGAG 60.913 66.667 0.00 0.00 0.00 5.03
4855 7599 3.224324 GTAGCTCATCGGGGGCGA 61.224 66.667 0.00 0.00 0.00 5.54
4856 7600 2.701163 GAAGTAGCTCATCGGGGGCG 62.701 65.000 0.00 0.00 0.00 6.13
4857 7601 1.069935 GAAGTAGCTCATCGGGGGC 59.930 63.158 0.00 0.00 0.00 5.80
4858 7602 0.390860 CTGAAGTAGCTCATCGGGGG 59.609 60.000 0.00 0.00 0.00 5.40
4859 7603 3.976339 CTGAAGTAGCTCATCGGGG 57.024 57.895 0.00 0.00 0.00 5.73
4869 7613 1.726853 CCCAGTTTCGGCTGAAGTAG 58.273 55.000 8.23 2.31 38.70 2.57
4870 7614 0.321298 GCCCAGTTTCGGCTGAAGTA 60.321 55.000 8.23 0.00 43.48 2.24
4871 7615 1.600916 GCCCAGTTTCGGCTGAAGT 60.601 57.895 8.23 0.00 43.48 3.01
4872 7616 3.267974 GCCCAGTTTCGGCTGAAG 58.732 61.111 8.23 0.00 43.48 3.02
4878 7622 1.508088 GCATCAAGCCCAGTTTCGG 59.492 57.895 0.00 0.00 37.23 4.30
4895 7639 0.727398 CTAGCTTAGTTTGCGTGGGC 59.273 55.000 0.00 0.00 40.52 5.36
4896 7640 1.369625 CCTAGCTTAGTTTGCGTGGG 58.630 55.000 0.00 0.00 35.28 4.61
4897 7641 0.727398 GCCTAGCTTAGTTTGCGTGG 59.273 55.000 0.00 0.00 35.28 4.94
4898 7642 1.438651 TGCCTAGCTTAGTTTGCGTG 58.561 50.000 0.00 0.00 35.28 5.34
4899 7643 1.804748 GTTGCCTAGCTTAGTTTGCGT 59.195 47.619 0.00 0.00 35.28 5.24
4900 7644 1.804151 TGTTGCCTAGCTTAGTTTGCG 59.196 47.619 0.00 0.00 35.28 4.85
4901 7645 3.915437 TTGTTGCCTAGCTTAGTTTGC 57.085 42.857 0.00 0.00 0.00 3.68
4902 7646 8.986477 ATTATTTTGTTGCCTAGCTTAGTTTG 57.014 30.769 0.00 0.00 0.00 2.93
4905 7649 8.406297 GCTAATTATTTTGTTGCCTAGCTTAGT 58.594 33.333 0.00 0.00 0.00 2.24
4906 7650 8.405531 TGCTAATTATTTTGTTGCCTAGCTTAG 58.594 33.333 0.00 0.00 33.35 2.18
4907 7651 8.287439 TGCTAATTATTTTGTTGCCTAGCTTA 57.713 30.769 0.00 0.00 33.35 3.09
4908 7652 7.169158 TGCTAATTATTTTGTTGCCTAGCTT 57.831 32.000 0.00 0.00 33.35 3.74
4909 7653 6.773976 TGCTAATTATTTTGTTGCCTAGCT 57.226 33.333 0.00 0.00 33.35 3.32
4910 7654 6.019559 GCTTGCTAATTATTTTGTTGCCTAGC 60.020 38.462 0.00 0.00 0.00 3.42
4911 7655 6.476706 GGCTTGCTAATTATTTTGTTGCCTAG 59.523 38.462 0.00 0.00 33.45 3.02
4912 7656 6.337356 GGCTTGCTAATTATTTTGTTGCCTA 58.663 36.000 0.00 0.00 33.45 3.93
4913 7657 5.178061 GGCTTGCTAATTATTTTGTTGCCT 58.822 37.500 0.00 0.00 33.45 4.75
4914 7658 4.332543 GGGCTTGCTAATTATTTTGTTGCC 59.667 41.667 0.00 0.00 35.24 4.52
4915 7659 4.934602 TGGGCTTGCTAATTATTTTGTTGC 59.065 37.500 0.00 0.00 0.00 4.17
4916 7660 5.931146 TGTGGGCTTGCTAATTATTTTGTTG 59.069 36.000 0.00 0.00 0.00 3.33
4917 7661 6.107901 TGTGGGCTTGCTAATTATTTTGTT 57.892 33.333 0.00 0.00 0.00 2.83
4918 7662 5.736951 TGTGGGCTTGCTAATTATTTTGT 57.263 34.783 0.00 0.00 0.00 2.83
4919 7663 5.063817 GCTTGTGGGCTTGCTAATTATTTTG 59.936 40.000 0.00 0.00 0.00 2.44
4920 7664 5.178061 GCTTGTGGGCTTGCTAATTATTTT 58.822 37.500 0.00 0.00 0.00 1.82
4921 7665 4.222588 TGCTTGTGGGCTTGCTAATTATTT 59.777 37.500 0.00 0.00 0.00 1.40
4922 7666 3.768757 TGCTTGTGGGCTTGCTAATTATT 59.231 39.130 0.00 0.00 0.00 1.40
4923 7667 3.364549 TGCTTGTGGGCTTGCTAATTAT 58.635 40.909 0.00 0.00 0.00 1.28
4924 7668 2.801483 TGCTTGTGGGCTTGCTAATTA 58.199 42.857 0.00 0.00 0.00 1.40
4925 7669 1.631405 TGCTTGTGGGCTTGCTAATT 58.369 45.000 0.00 0.00 0.00 1.40
4926 7670 1.856629 ATGCTTGTGGGCTTGCTAAT 58.143 45.000 0.00 0.00 0.00 1.73
4927 7671 2.505650 TATGCTTGTGGGCTTGCTAA 57.494 45.000 0.00 0.00 0.00 3.09
4928 7672 2.505650 TTATGCTTGTGGGCTTGCTA 57.494 45.000 0.00 0.00 0.00 3.49
4929 7673 1.631405 TTTATGCTTGTGGGCTTGCT 58.369 45.000 0.00 0.00 0.00 3.91
4930 7674 2.453983 TTTTATGCTTGTGGGCTTGC 57.546 45.000 0.00 0.00 0.00 4.01
4931 7675 3.006752 TCCTTTTTATGCTTGTGGGCTTG 59.993 43.478 0.00 0.00 0.00 4.01
4932 7676 3.238597 TCCTTTTTATGCTTGTGGGCTT 58.761 40.909 0.00 0.00 0.00 4.35
4933 7677 2.888212 TCCTTTTTATGCTTGTGGGCT 58.112 42.857 0.00 0.00 0.00 5.19
4934 7678 3.676291 TTCCTTTTTATGCTTGTGGGC 57.324 42.857 0.00 0.00 0.00 5.36
4935 7679 5.213891 ACTTTCCTTTTTATGCTTGTGGG 57.786 39.130 0.00 0.00 0.00 4.61
4936 7680 7.926018 ACTTTACTTTCCTTTTTATGCTTGTGG 59.074 33.333 0.00 0.00 0.00 4.17
4937 7681 8.755018 CACTTTACTTTCCTTTTTATGCTTGTG 58.245 33.333 0.00 0.00 0.00 3.33
4938 7682 8.474831 ACACTTTACTTTCCTTTTTATGCTTGT 58.525 29.630 0.00 0.00 0.00 3.16
4939 7683 8.755018 CACACTTTACTTTCCTTTTTATGCTTG 58.245 33.333 0.00 0.00 0.00 4.01
4940 7684 7.926018 CCACACTTTACTTTCCTTTTTATGCTT 59.074 33.333 0.00 0.00 0.00 3.91
4941 7685 7.433680 CCACACTTTACTTTCCTTTTTATGCT 58.566 34.615 0.00 0.00 0.00 3.79
4942 7686 6.645003 CCCACACTTTACTTTCCTTTTTATGC 59.355 38.462 0.00 0.00 0.00 3.14
4943 7687 7.947282 TCCCACACTTTACTTTCCTTTTTATG 58.053 34.615 0.00 0.00 0.00 1.90
4944 7688 8.541899 TTCCCACACTTTACTTTCCTTTTTAT 57.458 30.769 0.00 0.00 0.00 1.40
4945 7689 7.957992 TTCCCACACTTTACTTTCCTTTTTA 57.042 32.000 0.00 0.00 0.00 1.52
4946 7690 6.860790 TTCCCACACTTTACTTTCCTTTTT 57.139 33.333 0.00 0.00 0.00 1.94
4947 7691 6.860790 TTTCCCACACTTTACTTTCCTTTT 57.139 33.333 0.00 0.00 0.00 2.27
4948 7692 6.609616 TCATTTCCCACACTTTACTTTCCTTT 59.390 34.615 0.00 0.00 0.00 3.11
4949 7693 6.133356 TCATTTCCCACACTTTACTTTCCTT 58.867 36.000 0.00 0.00 0.00 3.36
4950 7694 5.701224 TCATTTCCCACACTTTACTTTCCT 58.299 37.500 0.00 0.00 0.00 3.36
4951 7695 6.590234 ATCATTTCCCACACTTTACTTTCC 57.410 37.500 0.00 0.00 0.00 3.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.