Multiple sequence alignment - TraesCS7D01G238000
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G238000 | chr7D | 100.000 | 6699 | 0 | 0 | 1 | 6699 | 203040251 | 203046949 | 0.000000e+00 | 12371.0 |
1 | TraesCS7D01G238000 | chr7D | 98.053 | 873 | 12 | 3 | 3546 | 4413 | 518669936 | 518670808 | 0.000000e+00 | 1513.0 |
2 | TraesCS7D01G238000 | chr7D | 88.333 | 60 | 6 | 1 | 6506 | 6564 | 66089855 | 66089796 | 3.350000e-08 | 71.3 |
3 | TraesCS7D01G238000 | chr7A | 91.687 | 3609 | 173 | 48 | 1 | 3548 | 214859405 | 214855863 | 0.000000e+00 | 4885.0 |
4 | TraesCS7D01G238000 | chr7A | 94.576 | 885 | 41 | 5 | 4444 | 5326 | 214855876 | 214854997 | 0.000000e+00 | 1362.0 |
5 | TraesCS7D01G238000 | chr7A | 90.084 | 948 | 56 | 18 | 5464 | 6376 | 214854910 | 214853966 | 0.000000e+00 | 1195.0 |
6 | TraesCS7D01G238000 | chr7A | 76.642 | 274 | 59 | 5 | 1446 | 1716 | 19938823 | 19938552 | 5.410000e-31 | 147.0 |
7 | TraesCS7D01G238000 | chr7A | 80.899 | 178 | 16 | 11 | 3564 | 3726 | 137769082 | 137769256 | 2.540000e-24 | 124.0 |
8 | TraesCS7D01G238000 | chr7B | 95.354 | 2475 | 72 | 11 | 1080 | 3548 | 166770861 | 166773298 | 0.000000e+00 | 3893.0 |
9 | TraesCS7D01G238000 | chr7B | 94.509 | 1038 | 37 | 8 | 1 | 1022 | 166769423 | 166770456 | 0.000000e+00 | 1583.0 |
10 | TraesCS7D01G238000 | chr7B | 93.033 | 976 | 55 | 8 | 4443 | 5415 | 166773284 | 166774249 | 0.000000e+00 | 1413.0 |
11 | TraesCS7D01G238000 | chr7B | 91.335 | 1004 | 54 | 16 | 5448 | 6423 | 166774250 | 166775248 | 0.000000e+00 | 1341.0 |
12 | TraesCS7D01G238000 | chr2D | 98.624 | 872 | 8 | 2 | 3546 | 4413 | 337396484 | 337397355 | 0.000000e+00 | 1541.0 |
13 | TraesCS7D01G238000 | chr2D | 96.465 | 877 | 15 | 7 | 3545 | 4416 | 555162870 | 555162005 | 0.000000e+00 | 1434.0 |
14 | TraesCS7D01G238000 | chr2D | 82.320 | 181 | 13 | 13 | 3546 | 3726 | 393689041 | 393688880 | 9.060000e-29 | 139.0 |
15 | TraesCS7D01G238000 | chr2D | 82.320 | 181 | 13 | 13 | 3546 | 3726 | 623999575 | 623999414 | 9.060000e-29 | 139.0 |
16 | TraesCS7D01G238000 | chr4D | 98.288 | 876 | 11 | 2 | 3542 | 4413 | 323550163 | 323551038 | 0.000000e+00 | 1531.0 |
17 | TraesCS7D01G238000 | chr4D | 97.166 | 882 | 13 | 2 | 3539 | 4416 | 386536505 | 386535632 | 0.000000e+00 | 1480.0 |
18 | TraesCS7D01G238000 | chr4D | 96.800 | 875 | 14 | 3 | 3546 | 4416 | 371146716 | 371145852 | 0.000000e+00 | 1448.0 |
19 | TraesCS7D01G238000 | chr4D | 96.429 | 28 | 1 | 0 | 4426 | 4453 | 386535644 | 386535617 | 5.600000e-01 | 47.3 |
20 | TraesCS7D01G238000 | chr5D | 97.275 | 844 | 12 | 4 | 3546 | 4385 | 294332479 | 294333315 | 0.000000e+00 | 1421.0 |
21 | TraesCS7D01G238000 | chr1D | 95.757 | 872 | 21 | 3 | 3546 | 4413 | 103681524 | 103682383 | 0.000000e+00 | 1391.0 |
22 | TraesCS7D01G238000 | chr1D | 98.030 | 660 | 3 | 1 | 3564 | 4213 | 393689806 | 393689147 | 0.000000e+00 | 1138.0 |
23 | TraesCS7D01G238000 | chr6A | 95.006 | 881 | 39 | 3 | 3540 | 4416 | 66262320 | 66261441 | 0.000000e+00 | 1378.0 |
24 | TraesCS7D01G238000 | chr6A | 79.722 | 720 | 72 | 43 | 3761 | 4448 | 169508862 | 169508185 | 2.850000e-123 | 453.0 |
25 | TraesCS7D01G238000 | chr2A | 95.260 | 865 | 13 | 3 | 3546 | 4406 | 680275897 | 680275057 | 0.000000e+00 | 1345.0 |
26 | TraesCS7D01G238000 | chr2A | 93.898 | 885 | 16 | 8 | 3546 | 4416 | 37080976 | 37080116 | 0.000000e+00 | 1301.0 |
27 | TraesCS7D01G238000 | chr4A | 79.668 | 723 | 73 | 44 | 3758 | 4448 | 615518994 | 615519674 | 2.850000e-123 | 453.0 |
28 | TraesCS7D01G238000 | chr4A | 92.982 | 57 | 3 | 1 | 4396 | 4451 | 314680632 | 314680576 | 1.550000e-11 | 82.4 |
29 | TraesCS7D01G238000 | chr2B | 79.215 | 688 | 78 | 41 | 3782 | 4451 | 520929908 | 520930548 | 1.040000e-112 | 418.0 |
30 | TraesCS7D01G238000 | chr2B | 91.156 | 147 | 3 | 1 | 3545 | 3691 | 520921922 | 520922058 | 2.470000e-44 | 191.0 |
31 | TraesCS7D01G238000 | chr5B | 82.836 | 268 | 15 | 13 | 4190 | 4448 | 219091707 | 219091952 | 1.890000e-50 | 211.0 |
32 | TraesCS7D01G238000 | chr6B | 98.611 | 72 | 0 | 1 | 3242 | 3313 | 148826983 | 148827053 | 7.050000e-25 | 126.0 |
33 | TraesCS7D01G238000 | chr6B | 92.958 | 71 | 3 | 2 | 4441 | 4510 | 148827220 | 148827289 | 1.190000e-17 | 102.0 |
34 | TraesCS7D01G238000 | chr3D | 93.590 | 78 | 4 | 1 | 3242 | 3319 | 575924312 | 575924236 | 1.530000e-21 | 115.0 |
35 | TraesCS7D01G238000 | chr3D | 86.250 | 80 | 5 | 4 | 4441 | 4519 | 575924075 | 575924001 | 1.550000e-11 | 82.4 |
36 | TraesCS7D01G238000 | chr3B | 79.054 | 148 | 27 | 4 | 6419 | 6563 | 228394145 | 228394291 | 1.540000e-16 | 99.0 |
37 | TraesCS7D01G238000 | chr5A | 96.364 | 55 | 2 | 0 | 4396 | 4450 | 621750783 | 621750729 | 2.570000e-14 | 91.6 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G238000 | chr7D | 203040251 | 203046949 | 6698 | False | 12371.000000 | 12371 | 100.000000 | 1 | 6699 | 1 | chr7D.!!$F1 | 6698 |
1 | TraesCS7D01G238000 | chr7D | 518669936 | 518670808 | 872 | False | 1513.000000 | 1513 | 98.053000 | 3546 | 4413 | 1 | chr7D.!!$F2 | 867 |
2 | TraesCS7D01G238000 | chr7A | 214853966 | 214859405 | 5439 | True | 2480.666667 | 4885 | 92.115667 | 1 | 6376 | 3 | chr7A.!!$R2 | 6375 |
3 | TraesCS7D01G238000 | chr7B | 166769423 | 166775248 | 5825 | False | 2057.500000 | 3893 | 93.557750 | 1 | 6423 | 4 | chr7B.!!$F1 | 6422 |
4 | TraesCS7D01G238000 | chr2D | 337396484 | 337397355 | 871 | False | 1541.000000 | 1541 | 98.624000 | 3546 | 4413 | 1 | chr2D.!!$F1 | 867 |
5 | TraesCS7D01G238000 | chr2D | 555162005 | 555162870 | 865 | True | 1434.000000 | 1434 | 96.465000 | 3545 | 4416 | 1 | chr2D.!!$R2 | 871 |
6 | TraesCS7D01G238000 | chr4D | 323550163 | 323551038 | 875 | False | 1531.000000 | 1531 | 98.288000 | 3542 | 4413 | 1 | chr4D.!!$F1 | 871 |
7 | TraesCS7D01G238000 | chr4D | 371145852 | 371146716 | 864 | True | 1448.000000 | 1448 | 96.800000 | 3546 | 4416 | 1 | chr4D.!!$R1 | 870 |
8 | TraesCS7D01G238000 | chr4D | 386535617 | 386536505 | 888 | True | 763.650000 | 1480 | 96.797500 | 3539 | 4453 | 2 | chr4D.!!$R2 | 914 |
9 | TraesCS7D01G238000 | chr5D | 294332479 | 294333315 | 836 | False | 1421.000000 | 1421 | 97.275000 | 3546 | 4385 | 1 | chr5D.!!$F1 | 839 |
10 | TraesCS7D01G238000 | chr1D | 103681524 | 103682383 | 859 | False | 1391.000000 | 1391 | 95.757000 | 3546 | 4413 | 1 | chr1D.!!$F1 | 867 |
11 | TraesCS7D01G238000 | chr1D | 393689147 | 393689806 | 659 | True | 1138.000000 | 1138 | 98.030000 | 3564 | 4213 | 1 | chr1D.!!$R1 | 649 |
12 | TraesCS7D01G238000 | chr6A | 66261441 | 66262320 | 879 | True | 1378.000000 | 1378 | 95.006000 | 3540 | 4416 | 1 | chr6A.!!$R1 | 876 |
13 | TraesCS7D01G238000 | chr6A | 169508185 | 169508862 | 677 | True | 453.000000 | 453 | 79.722000 | 3761 | 4448 | 1 | chr6A.!!$R2 | 687 |
14 | TraesCS7D01G238000 | chr2A | 680275057 | 680275897 | 840 | True | 1345.000000 | 1345 | 95.260000 | 3546 | 4406 | 1 | chr2A.!!$R2 | 860 |
15 | TraesCS7D01G238000 | chr2A | 37080116 | 37080976 | 860 | True | 1301.000000 | 1301 | 93.898000 | 3546 | 4416 | 1 | chr2A.!!$R1 | 870 |
16 | TraesCS7D01G238000 | chr4A | 615518994 | 615519674 | 680 | False | 453.000000 | 453 | 79.668000 | 3758 | 4448 | 1 | chr4A.!!$F1 | 690 |
17 | TraesCS7D01G238000 | chr2B | 520929908 | 520930548 | 640 | False | 418.000000 | 418 | 79.215000 | 3782 | 4451 | 1 | chr2B.!!$F2 | 669 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
130 | 135 | 0.035458 | GGAATGGCCATCTCGTAGGG | 59.965 | 60.000 | 21.08 | 0.0 | 36.34 | 3.53 | F |
261 | 270 | 0.263765 | TTACCTACCCCGAGGAGCAT | 59.736 | 55.000 | 0.00 | 0.0 | 39.15 | 3.79 | F |
649 | 700 | 0.391793 | CTTCTTCTGTTCGGGAGGGC | 60.392 | 60.000 | 0.00 | 0.0 | 0.00 | 5.19 | F |
1069 | 1130 | 0.859232 | TCTTGCGTTGCGTCTTCTTC | 59.141 | 50.000 | 0.00 | 0.0 | 0.00 | 2.87 | F |
1235 | 1645 | 1.298157 | CCATCCACGCGCTCAAGAAA | 61.298 | 55.000 | 5.73 | 0.0 | 0.00 | 2.52 | F |
1494 | 1907 | 1.339247 | TGAAACCCGCCGTATGAATGT | 60.339 | 47.619 | 0.00 | 0.0 | 0.00 | 2.71 | F |
3341 | 3762 | 1.544691 | GAAACTGGTAGGAGACAGCGA | 59.455 | 52.381 | 0.00 | 0.0 | 38.25 | 4.93 | F |
4237 | 4788 | 1.069090 | GCGGGATGAGGCATCGTAA | 59.931 | 57.895 | 0.00 | 0.0 | 41.35 | 3.18 | F |
4735 | 5293 | 0.755327 | GGGAACTGTTGCCCTGTGTT | 60.755 | 55.000 | 19.19 | 0.0 | 41.31 | 3.32 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1364 | 1774 | 0.386476 | TGTGGTAGTCGTCGTGCTTT | 59.614 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 | R |
1911 | 2324 | 0.843309 | TGGTGGTGGAGTCAATGTGT | 59.157 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 | R |
2519 | 2936 | 1.004440 | GCAGAGAACAGGCCGAAGT | 60.004 | 57.895 | 0.00 | 0.00 | 0.00 | 3.01 | R |
2931 | 3348 | 0.378610 | GTTAGAAGCAGCAATCGGCC | 59.621 | 55.000 | 0.00 | 0.00 | 46.50 | 6.13 | R |
2934 | 3351 | 2.668457 | ACGAAGTTAGAAGCAGCAATCG | 59.332 | 45.455 | 0.00 | 0.00 | 37.78 | 3.34 | R |
3390 | 3811 | 1.380380 | GAGGGCTTCCATTGGTGGG | 60.380 | 63.158 | 1.86 | 0.00 | 46.06 | 4.61 | R |
4716 | 5274 | 0.755327 | AACACAGGGCAACAGTTCCC | 60.755 | 55.000 | 11.15 | 11.15 | 42.94 | 3.97 | R |
5538 | 6104 | 0.240945 | CCGCCAACGAATTCTGCTTT | 59.759 | 50.000 | 3.52 | 0.00 | 43.93 | 3.51 | R |
6431 | 7037 | 0.109597 | GTCATTTGGAGCCGCAAGTG | 60.110 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
130 | 135 | 0.035458 | GGAATGGCCATCTCGTAGGG | 59.965 | 60.000 | 21.08 | 0.00 | 36.34 | 3.53 |
166 | 175 | 2.395619 | CATCCCCCGGAGTATATACCC | 58.604 | 57.143 | 0.73 | 9.30 | 34.05 | 3.69 |
189 | 198 | 0.823356 | TCCACCGTATACCCTACGCC | 60.823 | 60.000 | 0.00 | 0.00 | 39.38 | 5.68 |
197 | 206 | 3.670055 | CGTATACCCTACGCCAAAATACG | 59.330 | 47.826 | 0.00 | 0.00 | 36.07 | 3.06 |
261 | 270 | 0.263765 | TTACCTACCCCGAGGAGCAT | 59.736 | 55.000 | 0.00 | 0.00 | 39.15 | 3.79 |
280 | 298 | 2.888464 | TACCGAGCCGAGAGAGGTGG | 62.888 | 65.000 | 0.00 | 0.00 | 36.49 | 4.61 |
293 | 311 | 1.284785 | AGAGGTGGGAGAGAGACAGAG | 59.715 | 57.143 | 0.00 | 0.00 | 0.00 | 3.35 |
410 | 442 | 4.311606 | TGCATCGCCGTAAATGTATGTAT | 58.688 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
417 | 449 | 4.828829 | CCGTAAATGTATGTATCTCCCCC | 58.171 | 47.826 | 0.00 | 0.00 | 0.00 | 5.40 |
532 | 574 | 4.475135 | GCGAGGGGAGAAGGTGGC | 62.475 | 72.222 | 0.00 | 0.00 | 0.00 | 5.01 |
649 | 700 | 0.391793 | CTTCTTCTGTTCGGGAGGGC | 60.392 | 60.000 | 0.00 | 0.00 | 0.00 | 5.19 |
710 | 761 | 1.657181 | CGGAATTTATTGCGGCGCC | 60.657 | 57.895 | 30.82 | 19.07 | 45.88 | 6.53 |
711 | 762 | 1.299850 | GGAATTTATTGCGGCGCCC | 60.300 | 57.895 | 30.82 | 16.65 | 0.00 | 6.13 |
779 | 838 | 3.607078 | GCGAACTGCAAATCGTTTCTCTT | 60.607 | 43.478 | 18.55 | 0.00 | 45.45 | 2.85 |
902 | 961 | 3.392616 | AGTCCTCCTTTTCTGCTTCTTGA | 59.607 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
995 | 1056 | 4.584743 | GTCCAAGAAGTTGAATTTGGAGGT | 59.415 | 41.667 | 5.13 | 0.00 | 46.98 | 3.85 |
1022 | 1083 | 1.201880 | GTCGGGTAAGAACGAGCTCTT | 59.798 | 52.381 | 12.85 | 0.00 | 40.09 | 2.85 |
1058 | 1119 | 2.308039 | GCGTCGTCCTTCTTGCGTT | 61.308 | 57.895 | 0.00 | 0.00 | 0.00 | 4.84 |
1059 | 1120 | 1.487231 | CGTCGTCCTTCTTGCGTTG | 59.513 | 57.895 | 0.00 | 0.00 | 0.00 | 4.10 |
1060 | 1121 | 1.204312 | GTCGTCCTTCTTGCGTTGC | 59.796 | 57.895 | 0.00 | 0.00 | 0.00 | 4.17 |
1061 | 1122 | 2.170985 | CGTCCTTCTTGCGTTGCG | 59.829 | 61.111 | 0.00 | 0.00 | 0.00 | 4.85 |
1062 | 1123 | 2.594962 | CGTCCTTCTTGCGTTGCGT | 61.595 | 57.895 | 0.00 | 0.00 | 0.00 | 5.24 |
1063 | 1124 | 1.204312 | GTCCTTCTTGCGTTGCGTC | 59.796 | 57.895 | 0.00 | 0.00 | 0.00 | 5.19 |
1069 | 1130 | 0.859232 | TCTTGCGTTGCGTCTTCTTC | 59.141 | 50.000 | 0.00 | 0.00 | 0.00 | 2.87 |
1107 | 1515 | 4.863925 | GTGAGGCGCCGCTCTCTC | 62.864 | 72.222 | 30.49 | 17.47 | 30.89 | 3.20 |
1109 | 1517 | 4.264638 | GAGGCGCCGCTCTCTCTC | 62.265 | 72.222 | 24.06 | 7.69 | 0.00 | 3.20 |
1110 | 1518 | 4.813235 | AGGCGCCGCTCTCTCTCT | 62.813 | 66.667 | 23.20 | 0.00 | 0.00 | 3.10 |
1111 | 1519 | 4.264638 | GGCGCCGCTCTCTCTCTC | 62.265 | 72.222 | 12.58 | 0.00 | 0.00 | 3.20 |
1235 | 1645 | 1.298157 | CCATCCACGCGCTCAAGAAA | 61.298 | 55.000 | 5.73 | 0.00 | 0.00 | 2.52 |
1442 | 1855 | 2.834549 | TCCTTTTGTTTTTGCCCTGTGA | 59.165 | 40.909 | 0.00 | 0.00 | 0.00 | 3.58 |
1480 | 1893 | 3.091545 | TGAAATGCCAGGATCTGAAACC | 58.908 | 45.455 | 0.00 | 0.00 | 32.44 | 3.27 |
1494 | 1907 | 1.339247 | TGAAACCCGCCGTATGAATGT | 60.339 | 47.619 | 0.00 | 0.00 | 0.00 | 2.71 |
1704 | 2117 | 5.832595 | TGGTCAGGATTTTGAGTTTGATGAA | 59.167 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
1723 | 2136 | 1.748122 | CTGGATGAGGTGCTGTGCC | 60.748 | 63.158 | 0.00 | 0.00 | 0.00 | 5.01 |
1731 | 2144 | 2.429930 | GTGCTGTGCCACTACCCA | 59.570 | 61.111 | 0.00 | 0.00 | 33.02 | 4.51 |
1755 | 2168 | 2.067091 | GATACCATGGCGTCGACCGA | 62.067 | 60.000 | 13.04 | 0.36 | 39.56 | 4.69 |
1989 | 2402 | 3.865745 | CCTTCTTGGTCTACGCTTGTATG | 59.134 | 47.826 | 0.00 | 0.00 | 0.00 | 2.39 |
2037 | 2450 | 7.697352 | TGTTGAATGTGTTTTCATCAATGTC | 57.303 | 32.000 | 0.00 | 0.00 | 35.64 | 3.06 |
2317 | 2730 | 6.182627 | ACTTCATCCAAGATTCATGTAAGCA | 58.817 | 36.000 | 0.00 | 0.00 | 35.82 | 3.91 |
2460 | 2877 | 4.655963 | AGGTCAGTGTAAATTCATGCTGT | 58.344 | 39.130 | 0.00 | 0.00 | 0.00 | 4.40 |
2711 | 3128 | 7.665559 | TGGCACTCTAATTATGTGAAAGTCTTT | 59.334 | 33.333 | 17.57 | 0.00 | 33.95 | 2.52 |
2934 | 3351 | 5.065914 | TCACATTCAAGCTATAATCTGGCC | 58.934 | 41.667 | 0.00 | 0.00 | 30.08 | 5.36 |
3124 | 3545 | 4.687018 | TGCTTTATTCTTGCTTCGTACGAA | 59.313 | 37.500 | 27.57 | 27.57 | 0.00 | 3.85 |
3126 | 3547 | 5.896974 | GCTTTATTCTTGCTTCGTACGAATC | 59.103 | 40.000 | 29.25 | 25.21 | 33.28 | 2.52 |
3163 | 3584 | 9.189156 | TGTTCTATTTGGCTTTCTATAGCATTT | 57.811 | 29.630 | 0.00 | 0.00 | 43.02 | 2.32 |
3225 | 3646 | 7.305474 | GTTTATGTGAAACCTTCTACATGTGG | 58.695 | 38.462 | 9.11 | 5.55 | 35.04 | 4.17 |
3337 | 3758 | 4.281182 | GTCTCTTGAAACTGGTAGGAGACA | 59.719 | 45.833 | 13.15 | 0.00 | 44.09 | 3.41 |
3341 | 3762 | 1.544691 | GAAACTGGTAGGAGACAGCGA | 59.455 | 52.381 | 0.00 | 0.00 | 38.25 | 4.93 |
3355 | 3776 | 3.057456 | AGACAGCGACGAACTACTGAAAT | 60.057 | 43.478 | 0.00 | 0.00 | 34.25 | 2.17 |
3427 | 3848 | 4.501571 | CCCTCGTGATTTAGGTACCATCTG | 60.502 | 50.000 | 15.94 | 6.03 | 0.00 | 2.90 |
3536 | 3957 | 6.751514 | TGCTGTATAGTATTTGGTTGGTTG | 57.248 | 37.500 | 0.00 | 0.00 | 0.00 | 3.77 |
3537 | 3958 | 5.124776 | TGCTGTATAGTATTTGGTTGGTTGC | 59.875 | 40.000 | 0.00 | 0.00 | 0.00 | 4.17 |
3561 | 3982 | 1.620413 | GCCCAACGTTTACGAGTCGG | 61.620 | 60.000 | 18.30 | 0.41 | 43.02 | 4.79 |
4237 | 4788 | 1.069090 | GCGGGATGAGGCATCGTAA | 59.931 | 57.895 | 0.00 | 0.00 | 41.35 | 3.18 |
4290 | 4845 | 2.093106 | ACATGTCGACTAGTCTGGACC | 58.907 | 52.381 | 20.34 | 7.19 | 0.00 | 4.46 |
4295 | 4850 | 1.350019 | TCGACTAGTCTGGACCAGTCA | 59.650 | 52.381 | 21.06 | 6.80 | 45.94 | 3.41 |
4303 | 4858 | 2.753452 | GTCTGGACCAGTCATCGACTAA | 59.247 | 50.000 | 21.06 | 0.00 | 41.37 | 2.24 |
4411 | 4966 | 2.813061 | AGTCTAGACTAGTCGAGCGAC | 58.187 | 52.381 | 24.04 | 21.51 | 40.43 | 5.19 |
4422 | 4977 | 2.813061 | GTCGAGCGACTAGTCTAGACT | 58.187 | 52.381 | 27.72 | 27.72 | 41.57 | 3.24 |
4423 | 4978 | 3.963665 | GTCGAGCGACTAGTCTAGACTA | 58.036 | 50.000 | 27.03 | 27.03 | 39.77 | 2.59 |
4424 | 4979 | 3.730715 | GTCGAGCGACTAGTCTAGACTAC | 59.269 | 52.174 | 25.58 | 16.93 | 39.77 | 2.73 |
4425 | 4980 | 3.631686 | TCGAGCGACTAGTCTAGACTACT | 59.368 | 47.826 | 25.58 | 20.69 | 42.54 | 2.57 |
4426 | 4981 | 3.976942 | CGAGCGACTAGTCTAGACTACTC | 59.023 | 52.174 | 25.58 | 25.18 | 42.54 | 2.59 |
4427 | 4982 | 3.968649 | AGCGACTAGTCTAGACTACTCG | 58.031 | 50.000 | 34.30 | 34.30 | 44.97 | 4.18 |
4568 | 5125 | 6.387041 | CATGAACAATGCATCCATAGAACT | 57.613 | 37.500 | 0.00 | 0.00 | 0.00 | 3.01 |
4573 | 5130 | 7.879677 | TGAACAATGCATCCATAGAACTATAGG | 59.120 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
4574 | 5131 | 6.176183 | ACAATGCATCCATAGAACTATAGGC | 58.824 | 40.000 | 0.00 | 0.00 | 0.00 | 3.93 |
4652 | 5209 | 2.705658 | AGATGGAAGATTGGACGGCATA | 59.294 | 45.455 | 0.00 | 0.00 | 0.00 | 3.14 |
4667 | 5224 | 4.519213 | ACGGCATAGGCATAAAACACTTA | 58.481 | 39.130 | 0.15 | 0.00 | 43.71 | 2.24 |
4716 | 5274 | 2.439507 | AGGTCATTGGTATACCTGCCAG | 59.560 | 50.000 | 22.41 | 8.43 | 42.08 | 4.85 |
4722 | 5280 | 1.274184 | TGGTATACCTGCCAGGGAACT | 60.274 | 52.381 | 22.41 | 0.00 | 40.58 | 3.01 |
4735 | 5293 | 0.755327 | GGGAACTGTTGCCCTGTGTT | 60.755 | 55.000 | 19.19 | 0.00 | 41.31 | 3.32 |
4745 | 5303 | 2.546899 | TGCCCTGTGTTATGTACTCCT | 58.453 | 47.619 | 0.00 | 0.00 | 0.00 | 3.69 |
4868 | 5426 | 4.455606 | ACTGCTTTATCTATCCTTGGTGC | 58.544 | 43.478 | 0.00 | 0.00 | 0.00 | 5.01 |
4908 | 5466 | 1.955778 | TGATCCAGTTGGCAAGTGTTG | 59.044 | 47.619 | 28.11 | 16.89 | 34.44 | 3.33 |
4919 | 5477 | 3.245016 | TGGCAAGTGTTGATCTTCCTCAT | 60.245 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
4920 | 5478 | 3.760684 | GGCAAGTGTTGATCTTCCTCATT | 59.239 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
4921 | 5479 | 4.380233 | GGCAAGTGTTGATCTTCCTCATTG | 60.380 | 45.833 | 0.00 | 0.00 | 0.00 | 2.82 |
5029 | 5587 | 6.116806 | TCTTGTTAAAGTTGTGACAGCCTTA | 58.883 | 36.000 | 0.00 | 0.00 | 34.78 | 2.69 |
5047 | 5605 | 6.545298 | CAGCCTTAATCAAGCTATTCTCCTTT | 59.455 | 38.462 | 0.00 | 0.00 | 0.00 | 3.11 |
5078 | 5636 | 4.909696 | TTCATCTCTAGTAGAGCACTGC | 57.090 | 45.455 | 20.60 | 0.00 | 42.04 | 4.40 |
5101 | 5659 | 2.548295 | GCTTGAAAACGCCGGTCCA | 61.548 | 57.895 | 1.90 | 0.00 | 0.00 | 4.02 |
5197 | 5755 | 3.829948 | ACAGCGCATTGAAAATCTTGAG | 58.170 | 40.909 | 11.47 | 0.00 | 0.00 | 3.02 |
5239 | 5797 | 1.302285 | CAAGCCACCAGAGATGCCT | 59.698 | 57.895 | 0.00 | 0.00 | 0.00 | 4.75 |
5328 | 5886 | 7.883833 | GGAGAGGACCAAAAGAGTAAGTTTTAT | 59.116 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
5329 | 5887 | 8.622948 | AGAGGACCAAAAGAGTAAGTTTTATG | 57.377 | 34.615 | 0.00 | 0.00 | 0.00 | 1.90 |
5380 | 5943 | 3.324993 | CTCTTGAGAGTTCTGAGTTGGC | 58.675 | 50.000 | 0.00 | 0.00 | 37.40 | 4.52 |
5393 | 5956 | 2.229792 | GAGTTGGCCATGTGTCTCAAA | 58.770 | 47.619 | 6.09 | 0.00 | 0.00 | 2.69 |
5404 | 5967 | 5.105877 | CCATGTGTCTCAAAGCATCTTCATT | 60.106 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
5405 | 5968 | 5.366829 | TGTGTCTCAAAGCATCTTCATTG | 57.633 | 39.130 | 0.00 | 0.00 | 0.00 | 2.82 |
5410 | 5973 | 4.112634 | CTCAAAGCATCTTCATTGCATGG | 58.887 | 43.478 | 0.00 | 0.00 | 42.62 | 3.66 |
5411 | 5974 | 3.764972 | TCAAAGCATCTTCATTGCATGGA | 59.235 | 39.130 | 0.00 | 0.00 | 42.62 | 3.41 |
5412 | 5975 | 4.404394 | TCAAAGCATCTTCATTGCATGGAT | 59.596 | 37.500 | 0.00 | 0.00 | 42.62 | 3.41 |
5413 | 5976 | 4.322080 | AAGCATCTTCATTGCATGGATG | 57.678 | 40.909 | 0.00 | 0.00 | 42.62 | 3.51 |
5414 | 5977 | 3.296854 | AGCATCTTCATTGCATGGATGT | 58.703 | 40.909 | 0.00 | 0.00 | 42.62 | 3.06 |
5415 | 5978 | 3.068165 | AGCATCTTCATTGCATGGATGTG | 59.932 | 43.478 | 0.00 | 0.00 | 42.62 | 3.21 |
5416 | 5979 | 3.798889 | GCATCTTCATTGCATGGATGTGG | 60.799 | 47.826 | 0.00 | 2.97 | 39.90 | 4.17 |
5418 | 5981 | 2.756207 | TCTTCATTGCATGGATGTGGTG | 59.244 | 45.455 | 0.00 | 0.00 | 0.00 | 4.17 |
5419 | 5982 | 2.510928 | TCATTGCATGGATGTGGTGA | 57.489 | 45.000 | 0.00 | 0.00 | 0.00 | 4.02 |
5420 | 5983 | 2.805194 | TCATTGCATGGATGTGGTGAA | 58.195 | 42.857 | 0.00 | 0.00 | 0.00 | 3.18 |
5421 | 5984 | 2.756207 | TCATTGCATGGATGTGGTGAAG | 59.244 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
5422 | 5985 | 2.583024 | TTGCATGGATGTGGTGAAGA | 57.417 | 45.000 | 0.00 | 0.00 | 0.00 | 2.87 |
5423 | 5986 | 2.812836 | TGCATGGATGTGGTGAAGAT | 57.187 | 45.000 | 0.00 | 0.00 | 0.00 | 2.40 |
5427 | 5990 | 3.746751 | GCATGGATGTGGTGAAGATAGCT | 60.747 | 47.826 | 0.00 | 0.00 | 0.00 | 3.32 |
5428 | 5991 | 4.503817 | GCATGGATGTGGTGAAGATAGCTA | 60.504 | 45.833 | 0.00 | 0.00 | 0.00 | 3.32 |
5429 | 5992 | 4.944619 | TGGATGTGGTGAAGATAGCTAG | 57.055 | 45.455 | 0.00 | 0.00 | 0.00 | 3.42 |
5430 | 5993 | 4.290093 | TGGATGTGGTGAAGATAGCTAGT | 58.710 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
5431 | 5994 | 4.716784 | TGGATGTGGTGAAGATAGCTAGTT | 59.283 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
5432 | 5995 | 5.189736 | TGGATGTGGTGAAGATAGCTAGTTT | 59.810 | 40.000 | 0.00 | 0.00 | 0.00 | 2.66 |
5433 | 5996 | 6.116126 | GGATGTGGTGAAGATAGCTAGTTTT | 58.884 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
5434 | 5997 | 6.599638 | GGATGTGGTGAAGATAGCTAGTTTTT | 59.400 | 38.462 | 0.00 | 0.00 | 0.00 | 1.94 |
5435 | 5998 | 7.201652 | GGATGTGGTGAAGATAGCTAGTTTTTC | 60.202 | 40.741 | 0.00 | 1.47 | 0.00 | 2.29 |
5436 | 5999 | 6.769512 | TGTGGTGAAGATAGCTAGTTTTTCT | 58.230 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
5437 | 6000 | 6.874134 | TGTGGTGAAGATAGCTAGTTTTTCTC | 59.126 | 38.462 | 0.00 | 2.07 | 0.00 | 2.87 |
5438 | 6001 | 7.100409 | GTGGTGAAGATAGCTAGTTTTTCTCT | 58.900 | 38.462 | 0.00 | 0.00 | 0.00 | 3.10 |
5439 | 6002 | 7.604545 | GTGGTGAAGATAGCTAGTTTTTCTCTT | 59.395 | 37.037 | 0.00 | 1.24 | 0.00 | 2.85 |
5454 | 6017 | 9.741647 | AGTTTTTCTCTTCTCAAAGCTATTTTG | 57.258 | 29.630 | 0.00 | 0.00 | 46.09 | 2.44 |
5456 | 6019 | 8.463930 | TTTTCTCTTCTCAAAGCTATTTTGGA | 57.536 | 30.769 | 0.00 | 0.00 | 45.05 | 3.53 |
5457 | 6020 | 7.678947 | TTCTCTTCTCAAAGCTATTTTGGAG | 57.321 | 36.000 | 0.00 | 0.00 | 45.05 | 3.86 |
5458 | 6021 | 5.645497 | TCTCTTCTCAAAGCTATTTTGGAGC | 59.355 | 40.000 | 0.00 | 0.00 | 45.05 | 4.70 |
5459 | 6022 | 5.316167 | TCTTCTCAAAGCTATTTTGGAGCA | 58.684 | 37.500 | 0.00 | 0.00 | 45.05 | 4.26 |
5460 | 6023 | 5.769662 | TCTTCTCAAAGCTATTTTGGAGCAA | 59.230 | 36.000 | 0.00 | 0.00 | 45.05 | 3.91 |
5462 | 6025 | 6.199937 | TCTCAAAGCTATTTTGGAGCAATC | 57.800 | 37.500 | 0.00 | 0.00 | 45.05 | 2.67 |
5501 | 6066 | 1.655099 | GCATTGTGGTTTATGCAAGCG | 59.345 | 47.619 | 0.00 | 0.00 | 44.99 | 4.68 |
5550 | 6116 | 0.454957 | CGGTGGCAAAGCAGAATTCG | 60.455 | 55.000 | 0.00 | 0.00 | 0.00 | 3.34 |
5606 | 6172 | 1.513586 | GAGTCAAGGTACGCCGTCG | 60.514 | 63.158 | 0.00 | 0.00 | 40.50 | 5.12 |
5610 | 6176 | 1.800315 | CAAGGTACGCCGTCGACAG | 60.800 | 63.158 | 17.16 | 5.18 | 40.50 | 3.51 |
5617 | 6183 | 1.233285 | ACGCCGTCGACAGTTAGACT | 61.233 | 55.000 | 17.16 | 0.00 | 39.41 | 3.24 |
5619 | 6185 | 1.615502 | GCCGTCGACAGTTAGACTTC | 58.384 | 55.000 | 17.16 | 0.00 | 35.38 | 3.01 |
5620 | 6186 | 1.068748 | GCCGTCGACAGTTAGACTTCA | 60.069 | 52.381 | 17.16 | 0.00 | 35.38 | 3.02 |
5622 | 6188 | 2.582687 | CGTCGACAGTTAGACTTCACC | 58.417 | 52.381 | 17.16 | 0.00 | 35.38 | 4.02 |
5623 | 6189 | 2.582687 | GTCGACAGTTAGACTTCACCG | 58.417 | 52.381 | 11.55 | 0.00 | 34.74 | 4.94 |
5639 | 6205 | 1.591158 | CACCGAACCGATTGTATTCCG | 59.409 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
5648 | 6214 | 4.334481 | ACCGATTGTATTCCGAAATGAACC | 59.666 | 41.667 | 0.00 | 0.00 | 0.00 | 3.62 |
5649 | 6215 | 4.334203 | CCGATTGTATTCCGAAATGAACCA | 59.666 | 41.667 | 0.00 | 0.00 | 0.00 | 3.67 |
5651 | 6217 | 5.504010 | CGATTGTATTCCGAAATGAACCAGG | 60.504 | 44.000 | 0.00 | 0.00 | 0.00 | 4.45 |
5655 | 6221 | 0.404040 | TCCGAAATGAACCAGGGCTT | 59.596 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
5901 | 6476 | 3.697166 | AGTTCATATTTTGAGCCCGGTT | 58.303 | 40.909 | 0.00 | 0.00 | 36.29 | 4.44 |
5922 | 6505 | 2.689034 | CCTCCCTCGCTCCCCTTT | 60.689 | 66.667 | 0.00 | 0.00 | 0.00 | 3.11 |
5983 | 6566 | 7.778470 | TTTTGTTGGCCAAAAGTGTATTAAG | 57.222 | 32.000 | 22.47 | 0.00 | 45.68 | 1.85 |
5984 | 6567 | 6.472686 | TTGTTGGCCAAAAGTGTATTAAGT | 57.527 | 33.333 | 22.47 | 0.00 | 0.00 | 2.24 |
5985 | 6568 | 6.079424 | TGTTGGCCAAAAGTGTATTAAGTC | 57.921 | 37.500 | 22.47 | 2.62 | 0.00 | 3.01 |
5986 | 6569 | 5.830991 | TGTTGGCCAAAAGTGTATTAAGTCT | 59.169 | 36.000 | 22.47 | 0.00 | 0.00 | 3.24 |
5987 | 6570 | 5.957842 | TGGCCAAAAGTGTATTAAGTCTG | 57.042 | 39.130 | 0.61 | 0.00 | 0.00 | 3.51 |
6070 | 6665 | 1.627550 | GACCCGAAAGAACAGCGAGC | 61.628 | 60.000 | 0.00 | 0.00 | 0.00 | 5.03 |
6089 | 6684 | 1.014044 | CGACAGGCTTTAGCGCTGAA | 61.014 | 55.000 | 22.90 | 18.28 | 43.26 | 3.02 |
6211 | 6811 | 4.338118 | GTCTCCAGAAATCTCGTGATCTCT | 59.662 | 45.833 | 0.00 | 0.00 | 30.61 | 3.10 |
6224 | 6824 | 0.033228 | GATCTCTCCCGACATGGCTG | 59.967 | 60.000 | 0.00 | 0.00 | 35.87 | 4.85 |
6271 | 6871 | 3.432252 | ACGAATCTTGCACGGTCTTTTAG | 59.568 | 43.478 | 0.00 | 0.00 | 0.00 | 1.85 |
6288 | 6888 | 0.546747 | TAGTACAGGGCAGTGGGCTT | 60.547 | 55.000 | 0.00 | 0.00 | 44.01 | 4.35 |
6423 | 7029 | 2.695359 | GTGGTCTTTGATGCGGTTAGA | 58.305 | 47.619 | 0.00 | 0.00 | 0.00 | 2.10 |
6424 | 7030 | 2.673368 | GTGGTCTTTGATGCGGTTAGAG | 59.327 | 50.000 | 0.00 | 0.00 | 0.00 | 2.43 |
6425 | 7031 | 1.666189 | GGTCTTTGATGCGGTTAGAGC | 59.334 | 52.381 | 0.00 | 0.00 | 0.00 | 4.09 |
6439 | 7045 | 3.805267 | GAGCATCTCCACTTGCGG | 58.195 | 61.111 | 0.00 | 0.00 | 43.61 | 5.69 |
6440 | 7046 | 2.437359 | AGCATCTCCACTTGCGGC | 60.437 | 61.111 | 0.00 | 0.00 | 43.61 | 6.53 |
6441 | 7047 | 2.437359 | GCATCTCCACTTGCGGCT | 60.437 | 61.111 | 0.00 | 0.00 | 0.00 | 5.52 |
6442 | 7048 | 2.467826 | GCATCTCCACTTGCGGCTC | 61.468 | 63.158 | 0.00 | 0.00 | 0.00 | 4.70 |
6443 | 7049 | 1.817099 | CATCTCCACTTGCGGCTCC | 60.817 | 63.158 | 0.00 | 0.00 | 0.00 | 4.70 |
6444 | 7050 | 2.293318 | ATCTCCACTTGCGGCTCCA | 61.293 | 57.895 | 0.00 | 0.00 | 0.00 | 3.86 |
6445 | 7051 | 1.841302 | ATCTCCACTTGCGGCTCCAA | 61.841 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
6446 | 7052 | 1.600636 | CTCCACTTGCGGCTCCAAA | 60.601 | 57.895 | 0.00 | 0.00 | 0.00 | 3.28 |
6447 | 7053 | 0.962356 | CTCCACTTGCGGCTCCAAAT | 60.962 | 55.000 | 0.00 | 0.00 | 0.00 | 2.32 |
6448 | 7054 | 1.213537 | CCACTTGCGGCTCCAAATG | 59.786 | 57.895 | 0.00 | 0.00 | 0.00 | 2.32 |
6449 | 7055 | 1.243342 | CCACTTGCGGCTCCAAATGA | 61.243 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
6450 | 7056 | 0.109597 | CACTTGCGGCTCCAAATGAC | 60.110 | 55.000 | 0.00 | 0.00 | 0.00 | 3.06 |
6451 | 7057 | 0.250901 | ACTTGCGGCTCCAAATGACT | 60.251 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
6452 | 7058 | 0.449388 | CTTGCGGCTCCAAATGACTC | 59.551 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
6453 | 7059 | 0.960364 | TTGCGGCTCCAAATGACTCC | 60.960 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
6454 | 7060 | 1.078143 | GCGGCTCCAAATGACTCCT | 60.078 | 57.895 | 0.00 | 0.00 | 0.00 | 3.69 |
6455 | 7061 | 0.178068 | GCGGCTCCAAATGACTCCTA | 59.822 | 55.000 | 0.00 | 0.00 | 0.00 | 2.94 |
6456 | 7062 | 1.808133 | GCGGCTCCAAATGACTCCTAG | 60.808 | 57.143 | 0.00 | 0.00 | 0.00 | 3.02 |
6457 | 7063 | 1.202580 | CGGCTCCAAATGACTCCTAGG | 60.203 | 57.143 | 0.82 | 0.82 | 0.00 | 3.02 |
6458 | 7064 | 1.141858 | GGCTCCAAATGACTCCTAGGG | 59.858 | 57.143 | 9.46 | 2.03 | 0.00 | 3.53 |
6459 | 7065 | 1.475930 | GCTCCAAATGACTCCTAGGGC | 60.476 | 57.143 | 9.46 | 0.00 | 0.00 | 5.19 |
6460 | 7066 | 1.839994 | CTCCAAATGACTCCTAGGGCA | 59.160 | 52.381 | 9.46 | 5.65 | 0.00 | 5.36 |
6461 | 7067 | 1.839994 | TCCAAATGACTCCTAGGGCAG | 59.160 | 52.381 | 9.46 | 1.97 | 0.00 | 4.85 |
6462 | 7068 | 1.561542 | CCAAATGACTCCTAGGGCAGT | 59.438 | 52.381 | 9.46 | 5.81 | 0.00 | 4.40 |
6463 | 7069 | 2.025887 | CCAAATGACTCCTAGGGCAGTT | 60.026 | 50.000 | 9.46 | 7.89 | 0.00 | 3.16 |
6464 | 7070 | 3.562176 | CCAAATGACTCCTAGGGCAGTTT | 60.562 | 47.826 | 9.46 | 1.91 | 0.00 | 2.66 |
6465 | 7071 | 4.082125 | CAAATGACTCCTAGGGCAGTTTT | 58.918 | 43.478 | 9.46 | 2.03 | 0.00 | 2.43 |
6466 | 7072 | 4.388577 | AATGACTCCTAGGGCAGTTTTT | 57.611 | 40.909 | 9.46 | 1.62 | 0.00 | 1.94 |
6481 | 7087 | 3.219928 | TTTTTGGCCGGCGCTGAA | 61.220 | 55.556 | 22.54 | 10.13 | 34.44 | 3.02 |
6482 | 7088 | 2.786495 | TTTTTGGCCGGCGCTGAAA | 61.786 | 52.632 | 22.54 | 15.31 | 34.44 | 2.69 |
6483 | 7089 | 2.298158 | TTTTTGGCCGGCGCTGAAAA | 62.298 | 50.000 | 22.54 | 19.64 | 34.44 | 2.29 |
6484 | 7090 | 2.298158 | TTTTGGCCGGCGCTGAAAAA | 62.298 | 50.000 | 22.54 | 17.40 | 34.44 | 1.94 |
6499 | 7105 | 3.950869 | AAAAACTCCCTAGTCGCCC | 57.049 | 52.632 | 0.00 | 0.00 | 33.75 | 6.13 |
6500 | 7106 | 1.359168 | AAAAACTCCCTAGTCGCCCT | 58.641 | 50.000 | 0.00 | 0.00 | 33.75 | 5.19 |
6501 | 7107 | 0.903236 | AAAACTCCCTAGTCGCCCTC | 59.097 | 55.000 | 0.00 | 0.00 | 33.75 | 4.30 |
6502 | 7108 | 0.252103 | AAACTCCCTAGTCGCCCTCA | 60.252 | 55.000 | 0.00 | 0.00 | 33.75 | 3.86 |
6503 | 7109 | 0.971447 | AACTCCCTAGTCGCCCTCAC | 60.971 | 60.000 | 0.00 | 0.00 | 33.75 | 3.51 |
6504 | 7110 | 1.379977 | CTCCCTAGTCGCCCTCACA | 60.380 | 63.158 | 0.00 | 0.00 | 0.00 | 3.58 |
6505 | 7111 | 0.970937 | CTCCCTAGTCGCCCTCACAA | 60.971 | 60.000 | 0.00 | 0.00 | 0.00 | 3.33 |
6506 | 7112 | 0.970937 | TCCCTAGTCGCCCTCACAAG | 60.971 | 60.000 | 0.00 | 0.00 | 0.00 | 3.16 |
6507 | 7113 | 1.517832 | CCTAGTCGCCCTCACAAGG | 59.482 | 63.158 | 0.00 | 0.00 | 42.95 | 3.61 |
6513 | 7119 | 4.373116 | GCCCTCACAAGGCGTCGA | 62.373 | 66.667 | 0.00 | 0.00 | 41.41 | 4.20 |
6514 | 7120 | 2.342279 | CCCTCACAAGGCGTCGAA | 59.658 | 61.111 | 0.00 | 0.00 | 41.85 | 3.71 |
6515 | 7121 | 1.079127 | CCCTCACAAGGCGTCGAAT | 60.079 | 57.895 | 0.00 | 0.00 | 41.85 | 3.34 |
6516 | 7122 | 0.673644 | CCCTCACAAGGCGTCGAATT | 60.674 | 55.000 | 0.00 | 0.00 | 41.85 | 2.17 |
6517 | 7123 | 0.721718 | CCTCACAAGGCGTCGAATTC | 59.278 | 55.000 | 0.00 | 0.00 | 35.37 | 2.17 |
6518 | 7124 | 1.673033 | CCTCACAAGGCGTCGAATTCT | 60.673 | 52.381 | 3.52 | 0.00 | 35.37 | 2.40 |
6519 | 7125 | 1.391485 | CTCACAAGGCGTCGAATTCTG | 59.609 | 52.381 | 3.52 | 0.00 | 0.00 | 3.02 |
6520 | 7126 | 0.179215 | CACAAGGCGTCGAATTCTGC | 60.179 | 55.000 | 3.52 | 4.88 | 0.00 | 4.26 |
6523 | 7129 | 3.564027 | GGCGTCGAATTCTGCCGG | 61.564 | 66.667 | 14.80 | 0.00 | 37.81 | 6.13 |
6524 | 7130 | 2.813908 | GCGTCGAATTCTGCCGGT | 60.814 | 61.111 | 1.90 | 0.00 | 0.00 | 5.28 |
6525 | 7131 | 2.388232 | GCGTCGAATTCTGCCGGTT | 61.388 | 57.895 | 1.90 | 0.00 | 0.00 | 4.44 |
6526 | 7132 | 1.708027 | CGTCGAATTCTGCCGGTTC | 59.292 | 57.895 | 1.90 | 0.00 | 0.00 | 3.62 |
6527 | 7133 | 1.708027 | GTCGAATTCTGCCGGTTCG | 59.292 | 57.895 | 15.77 | 15.77 | 44.31 | 3.95 |
6537 | 7143 | 3.336566 | CCGGTTCGGCTCGTTTTT | 58.663 | 55.556 | 0.00 | 0.00 | 41.17 | 1.94 |
6551 | 7157 | 3.065567 | TTTTTGGCCCGGCGATCC | 61.066 | 61.111 | 9.30 | 9.66 | 0.00 | 3.36 |
6552 | 7158 | 3.577334 | TTTTTGGCCCGGCGATCCT | 62.577 | 57.895 | 9.30 | 0.00 | 0.00 | 3.24 |
6553 | 7159 | 2.199613 | TTTTTGGCCCGGCGATCCTA | 62.200 | 55.000 | 9.30 | 2.64 | 0.00 | 2.94 |
6554 | 7160 | 2.602746 | TTTTGGCCCGGCGATCCTAG | 62.603 | 60.000 | 9.30 | 0.00 | 0.00 | 3.02 |
6561 | 7167 | 2.029221 | GGCGATCCTAGGCCGAAC | 59.971 | 66.667 | 22.16 | 12.65 | 39.93 | 3.95 |
6562 | 7168 | 2.029221 | GCGATCCTAGGCCGAACC | 59.971 | 66.667 | 22.16 | 5.89 | 39.61 | 3.62 |
6563 | 7169 | 2.735237 | CGATCCTAGGCCGAACCC | 59.265 | 66.667 | 15.51 | 0.00 | 40.58 | 4.11 |
6564 | 7170 | 1.833049 | CGATCCTAGGCCGAACCCT | 60.833 | 63.158 | 15.51 | 0.00 | 40.58 | 4.34 |
6565 | 7171 | 0.538977 | CGATCCTAGGCCGAACCCTA | 60.539 | 60.000 | 15.51 | 0.00 | 40.58 | 3.53 |
6566 | 7172 | 1.891450 | CGATCCTAGGCCGAACCCTAT | 60.891 | 57.143 | 15.51 | 0.00 | 40.58 | 2.57 |
6567 | 7173 | 2.619849 | CGATCCTAGGCCGAACCCTATA | 60.620 | 54.545 | 15.51 | 0.00 | 40.58 | 1.31 |
6568 | 7174 | 2.599408 | TCCTAGGCCGAACCCTATAG | 57.401 | 55.000 | 2.96 | 0.00 | 40.58 | 1.31 |
6569 | 7175 | 1.076677 | TCCTAGGCCGAACCCTATAGG | 59.923 | 57.143 | 12.27 | 12.27 | 40.58 | 2.57 |
6592 | 7198 | 4.444024 | GCATGCGCTGCGAACGAA | 62.444 | 61.111 | 28.07 | 5.24 | 41.97 | 3.85 |
6593 | 7199 | 2.276244 | CATGCGCTGCGAACGAAG | 60.276 | 61.111 | 28.07 | 2.49 | 0.00 | 3.79 |
6594 | 7200 | 4.152625 | ATGCGCTGCGAACGAAGC | 62.153 | 61.111 | 28.07 | 16.12 | 43.23 | 3.86 |
6598 | 7204 | 4.491328 | GCTGCGAACGAAGCGAGC | 62.491 | 66.667 | 11.41 | 0.22 | 37.01 | 5.03 |
6599 | 7205 | 4.183526 | CTGCGAACGAAGCGAGCG | 62.184 | 66.667 | 0.00 | 0.00 | 37.44 | 5.03 |
6638 | 7244 | 3.443045 | CCCATGTGCTGCCGGAAC | 61.443 | 66.667 | 5.05 | 0.00 | 0.00 | 3.62 |
6651 | 7257 | 4.722008 | GGAACGCCGCTTGTTTTT | 57.278 | 50.000 | 0.00 | 0.00 | 0.00 | 1.94 |
6671 | 7277 | 4.698201 | TTTTGGGGATGTTTCCTTTTCC | 57.302 | 40.909 | 0.00 | 0.00 | 42.20 | 3.13 |
6672 | 7278 | 3.628832 | TTGGGGATGTTTCCTTTTCCT | 57.371 | 42.857 | 0.00 | 0.00 | 42.20 | 3.36 |
6673 | 7279 | 3.628832 | TGGGGATGTTTCCTTTTCCTT | 57.371 | 42.857 | 0.00 | 0.00 | 42.20 | 3.36 |
6674 | 7280 | 3.935172 | TGGGGATGTTTCCTTTTCCTTT | 58.065 | 40.909 | 0.00 | 0.00 | 42.20 | 3.11 |
6675 | 7281 | 4.302930 | TGGGGATGTTTCCTTTTCCTTTT | 58.697 | 39.130 | 0.00 | 0.00 | 42.20 | 2.27 |
6676 | 7282 | 4.724293 | TGGGGATGTTTCCTTTTCCTTTTT | 59.276 | 37.500 | 0.00 | 0.00 | 42.20 | 1.94 |
6677 | 7283 | 5.163248 | TGGGGATGTTTCCTTTTCCTTTTTC | 60.163 | 40.000 | 0.00 | 0.00 | 42.20 | 2.29 |
6678 | 7284 | 5.071788 | GGGGATGTTTCCTTTTCCTTTTTCT | 59.928 | 40.000 | 0.00 | 0.00 | 42.20 | 2.52 |
6679 | 7285 | 6.409234 | GGGGATGTTTCCTTTTCCTTTTTCTT | 60.409 | 38.462 | 0.00 | 0.00 | 42.20 | 2.52 |
6680 | 7286 | 7.054124 | GGGATGTTTCCTTTTCCTTTTTCTTT | 58.946 | 34.615 | 0.00 | 0.00 | 42.20 | 2.52 |
6681 | 7287 | 7.556275 | GGGATGTTTCCTTTTCCTTTTTCTTTT | 59.444 | 33.333 | 0.00 | 0.00 | 42.20 | 2.27 |
6682 | 7288 | 8.956426 | GGATGTTTCCTTTTCCTTTTTCTTTTT | 58.044 | 29.630 | 0.00 | 0.00 | 39.14 | 1.94 |
6683 | 7289 | 9.988350 | GATGTTTCCTTTTCCTTTTTCTTTTTC | 57.012 | 29.630 | 0.00 | 0.00 | 0.00 | 2.29 |
6684 | 7290 | 9.739276 | ATGTTTCCTTTTCCTTTTTCTTTTTCT | 57.261 | 25.926 | 0.00 | 0.00 | 0.00 | 2.52 |
6685 | 7291 | 9.567776 | TGTTTCCTTTTCCTTTTTCTTTTTCTT | 57.432 | 25.926 | 0.00 | 0.00 | 0.00 | 2.52 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
130 | 135 | 2.692273 | GATGGGGGTACGGGAATGGC | 62.692 | 65.000 | 0.00 | 0.00 | 0.00 | 4.40 |
166 | 175 | 2.030540 | CGTAGGGTATACGGTGGATGTG | 60.031 | 54.545 | 0.00 | 0.00 | 37.29 | 3.21 |
197 | 206 | 9.428097 | CGGTAGTGGTATTACCCTTATTTATTC | 57.572 | 37.037 | 10.37 | 0.00 | 37.50 | 1.75 |
261 | 270 | 1.451567 | CACCTCTCTCGGCTCGGTA | 60.452 | 63.158 | 0.00 | 0.00 | 0.00 | 4.02 |
280 | 298 | 0.969917 | TGCTGCCTCTGTCTCTCTCC | 60.970 | 60.000 | 0.00 | 0.00 | 0.00 | 3.71 |
293 | 311 | 4.792804 | GGGTGGAGCTCTGCTGCC | 62.793 | 72.222 | 14.64 | 8.59 | 46.33 | 4.85 |
417 | 449 | 2.356818 | GATGAGGGACGGAAGGAGCG | 62.357 | 65.000 | 0.00 | 0.00 | 0.00 | 5.03 |
532 | 574 | 8.150296 | AGATAAACAAAGAAAATGGAACCCAAG | 58.850 | 33.333 | 0.00 | 0.00 | 36.95 | 3.61 |
710 | 761 | 1.666888 | CCACTAAAAGCAAGCAAGCGG | 60.667 | 52.381 | 0.00 | 0.00 | 40.15 | 5.52 |
711 | 762 | 1.689959 | CCACTAAAAGCAAGCAAGCG | 58.310 | 50.000 | 0.00 | 0.00 | 40.15 | 4.68 |
712 | 763 | 1.422388 | GCCACTAAAAGCAAGCAAGC | 58.578 | 50.000 | 0.00 | 0.00 | 0.00 | 4.01 |
713 | 764 | 1.340889 | TGGCCACTAAAAGCAAGCAAG | 59.659 | 47.619 | 0.00 | 0.00 | 0.00 | 4.01 |
714 | 765 | 1.407936 | TGGCCACTAAAAGCAAGCAA | 58.592 | 45.000 | 0.00 | 0.00 | 0.00 | 3.91 |
715 | 766 | 1.407936 | TTGGCCACTAAAAGCAAGCA | 58.592 | 45.000 | 3.88 | 0.00 | 0.00 | 3.91 |
716 | 767 | 2.340337 | CATTGGCCACTAAAAGCAAGC | 58.660 | 47.619 | 3.88 | 0.00 | 0.00 | 4.01 |
717 | 768 | 2.288948 | TGCATTGGCCACTAAAAGCAAG | 60.289 | 45.455 | 3.88 | 0.00 | 40.13 | 4.01 |
887 | 946 | 5.970023 | CAGTCAGTTTCAAGAAGCAGAAAAG | 59.030 | 40.000 | 0.00 | 0.00 | 35.71 | 2.27 |
902 | 961 | 2.629617 | CCAAAGGATTGCCAGTCAGTTT | 59.370 | 45.455 | 0.00 | 0.00 | 35.10 | 2.66 |
960 | 1019 | 1.118965 | TCTTGGACACCAGCTCGGAA | 61.119 | 55.000 | 8.91 | 0.00 | 38.63 | 4.30 |
995 | 1056 | 3.991773 | CTCGTTCTTACCCGACATTTTCA | 59.008 | 43.478 | 0.00 | 0.00 | 0.00 | 2.69 |
1045 | 1106 | 1.204312 | GACGCAACGCAAGAAGGAC | 59.796 | 57.895 | 0.00 | 0.00 | 43.62 | 3.85 |
1058 | 1119 | 2.494059 | CCCAAGAAAGAAGAAGACGCA | 58.506 | 47.619 | 0.00 | 0.00 | 0.00 | 5.24 |
1059 | 1120 | 1.807142 | CCCCAAGAAAGAAGAAGACGC | 59.193 | 52.381 | 0.00 | 0.00 | 0.00 | 5.19 |
1060 | 1121 | 2.427506 | CCCCCAAGAAAGAAGAAGACG | 58.572 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
1104 | 1512 | 2.571202 | TCACTGCAGAGAGAGAGAGAGA | 59.429 | 50.000 | 23.35 | 0.00 | 0.00 | 3.10 |
1105 | 1513 | 2.989909 | TCACTGCAGAGAGAGAGAGAG | 58.010 | 52.381 | 23.35 | 0.00 | 0.00 | 3.20 |
1106 | 1514 | 3.544684 | GATCACTGCAGAGAGAGAGAGA | 58.455 | 50.000 | 23.35 | 4.12 | 0.00 | 3.10 |
1107 | 1515 | 2.620115 | GGATCACTGCAGAGAGAGAGAG | 59.380 | 54.545 | 23.35 | 0.00 | 0.00 | 3.20 |
1108 | 1516 | 2.025510 | TGGATCACTGCAGAGAGAGAGA | 60.026 | 50.000 | 23.35 | 6.56 | 0.00 | 3.10 |
1109 | 1517 | 2.377073 | TGGATCACTGCAGAGAGAGAG | 58.623 | 52.381 | 23.35 | 1.00 | 0.00 | 3.20 |
1110 | 1518 | 2.521547 | TGGATCACTGCAGAGAGAGA | 57.478 | 50.000 | 23.35 | 10.12 | 0.00 | 3.10 |
1111 | 1519 | 2.803852 | GCATGGATCACTGCAGAGAGAG | 60.804 | 54.545 | 23.35 | 8.49 | 38.28 | 3.20 |
1364 | 1774 | 0.386476 | TGTGGTAGTCGTCGTGCTTT | 59.614 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1442 | 1855 | 5.163581 | GCATTTCACAGAGCTATCCAAACAT | 60.164 | 40.000 | 0.00 | 0.00 | 0.00 | 2.71 |
1480 | 1893 | 1.364721 | TCACAACATTCATACGGCGG | 58.635 | 50.000 | 13.24 | 0.00 | 0.00 | 6.13 |
1494 | 1907 | 2.886523 | CCTTCAAGAACCTGCATCACAA | 59.113 | 45.455 | 0.00 | 0.00 | 0.00 | 3.33 |
1704 | 2117 | 1.002868 | GCACAGCACCTCATCCAGT | 60.003 | 57.895 | 0.00 | 0.00 | 0.00 | 4.00 |
1723 | 2136 | 1.874129 | TGGTATCCCTGTGGGTAGTG | 58.126 | 55.000 | 2.25 | 0.00 | 44.74 | 2.74 |
1731 | 2144 | 1.830145 | GACGCCATGGTATCCCTGT | 59.170 | 57.895 | 14.67 | 0.86 | 0.00 | 4.00 |
1737 | 2150 | 2.071844 | CTCGGTCGACGCCATGGTAT | 62.072 | 60.000 | 14.67 | 0.83 | 43.86 | 2.73 |
1767 | 2180 | 3.949031 | GAGCCTCTCGATGTACACC | 57.051 | 57.895 | 0.00 | 0.00 | 0.00 | 4.16 |
1911 | 2324 | 0.843309 | TGGTGGTGGAGTCAATGTGT | 59.157 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
1989 | 2402 | 9.353999 | ACAAAACTTTAACAAACAGATCAAGAC | 57.646 | 29.630 | 0.00 | 0.00 | 0.00 | 3.01 |
2008 | 2421 | 8.545229 | TTGATGAAAACACATTCAACAAAACT | 57.455 | 26.923 | 9.38 | 0.00 | 44.15 | 2.66 |
2317 | 2730 | 7.392673 | GCATGATCCTGACAAATAATCCATAGT | 59.607 | 37.037 | 0.00 | 0.00 | 0.00 | 2.12 |
2519 | 2936 | 1.004440 | GCAGAGAACAGGCCGAAGT | 60.004 | 57.895 | 0.00 | 0.00 | 0.00 | 3.01 |
2782 | 3199 | 7.791029 | TCCAGATTGTGTATCAGCTACAAATA | 58.209 | 34.615 | 3.25 | 0.00 | 41.93 | 1.40 |
2931 | 3348 | 0.378610 | GTTAGAAGCAGCAATCGGCC | 59.621 | 55.000 | 0.00 | 0.00 | 46.50 | 6.13 |
2934 | 3351 | 2.668457 | ACGAAGTTAGAAGCAGCAATCG | 59.332 | 45.455 | 0.00 | 0.00 | 37.78 | 3.34 |
3124 | 3545 | 7.559170 | AGCCAAATAGAACAAAGCTAATCAGAT | 59.441 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
3126 | 3547 | 7.093322 | AGCCAAATAGAACAAAGCTAATCAG | 57.907 | 36.000 | 0.00 | 0.00 | 0.00 | 2.90 |
3337 | 3758 | 3.428870 | CACAATTTCAGTAGTTCGTCGCT | 59.571 | 43.478 | 0.00 | 0.00 | 0.00 | 4.93 |
3341 | 3762 | 3.472652 | TGGCACAATTTCAGTAGTTCGT | 58.527 | 40.909 | 0.00 | 0.00 | 31.92 | 3.85 |
3390 | 3811 | 1.380380 | GAGGGCTTCCATTGGTGGG | 60.380 | 63.158 | 1.86 | 0.00 | 46.06 | 4.61 |
3427 | 3848 | 9.489084 | AGTTAAATAAGAAAAATGCAAGGGAAC | 57.511 | 29.630 | 0.00 | 0.00 | 0.00 | 3.62 |
3519 | 3940 | 5.823045 | GCTAGAGCAACCAACCAAATACTAT | 59.177 | 40.000 | 0.00 | 0.00 | 41.59 | 2.12 |
3522 | 3943 | 3.128764 | GGCTAGAGCAACCAACCAAATAC | 59.871 | 47.826 | 3.54 | 0.00 | 44.36 | 1.89 |
3524 | 3945 | 2.171003 | GGCTAGAGCAACCAACCAAAT | 58.829 | 47.619 | 3.54 | 0.00 | 44.36 | 2.32 |
3525 | 3946 | 1.616159 | GGCTAGAGCAACCAACCAAA | 58.384 | 50.000 | 3.54 | 0.00 | 44.36 | 3.28 |
3526 | 3947 | 0.251165 | GGGCTAGAGCAACCAACCAA | 60.251 | 55.000 | 3.54 | 0.00 | 44.36 | 3.67 |
3528 | 3949 | 0.251165 | TTGGGCTAGAGCAACCAACC | 60.251 | 55.000 | 7.83 | 0.00 | 44.36 | 3.77 |
3530 | 3951 | 0.605319 | CGTTGGGCTAGAGCAACCAA | 60.605 | 55.000 | 7.83 | 7.83 | 44.36 | 3.67 |
3531 | 3952 | 1.003839 | CGTTGGGCTAGAGCAACCA | 60.004 | 57.895 | 3.54 | 0.00 | 44.36 | 3.67 |
3532 | 3953 | 0.605589 | AACGTTGGGCTAGAGCAACC | 60.606 | 55.000 | 0.00 | 0.00 | 44.36 | 3.77 |
3533 | 3954 | 1.235724 | AAACGTTGGGCTAGAGCAAC | 58.764 | 50.000 | 0.00 | 0.00 | 44.36 | 4.17 |
3534 | 3955 | 2.419667 | GTAAACGTTGGGCTAGAGCAA | 58.580 | 47.619 | 0.00 | 0.00 | 44.36 | 3.91 |
3535 | 3956 | 1.670674 | CGTAAACGTTGGGCTAGAGCA | 60.671 | 52.381 | 0.00 | 0.00 | 37.40 | 4.26 |
3536 | 3957 | 0.997196 | CGTAAACGTTGGGCTAGAGC | 59.003 | 55.000 | 0.00 | 0.00 | 35.91 | 4.09 |
3537 | 3958 | 2.094854 | ACTCGTAAACGTTGGGCTAGAG | 60.095 | 50.000 | 0.00 | 8.07 | 40.80 | 2.43 |
3727 | 4159 | 4.893424 | GTGACTCCACTTTGCTTGTTTA | 57.107 | 40.909 | 0.00 | 0.00 | 40.10 | 2.01 |
4410 | 4965 | 5.125417 | AGTCGAACGAGTAGTCTAGACTAGT | 59.875 | 44.000 | 31.60 | 31.60 | 46.96 | 2.57 |
4411 | 4966 | 5.581605 | AGTCGAACGAGTAGTCTAGACTAG | 58.418 | 45.833 | 29.00 | 20.56 | 43.84 | 2.57 |
4412 | 4967 | 5.574891 | AGTCGAACGAGTAGTCTAGACTA | 57.425 | 43.478 | 25.58 | 25.58 | 42.54 | 2.59 |
4413 | 4968 | 4.423732 | GAGTCGAACGAGTAGTCTAGACT | 58.576 | 47.826 | 27.72 | 27.72 | 45.02 | 3.24 |
4414 | 4969 | 3.240401 | CGAGTCGAACGAGTAGTCTAGAC | 59.760 | 52.174 | 15.41 | 15.41 | 33.58 | 2.59 |
4415 | 4970 | 3.119673 | ACGAGTCGAACGAGTAGTCTAGA | 60.120 | 47.826 | 21.50 | 0.00 | 29.56 | 2.43 |
4416 | 4971 | 3.178267 | ACGAGTCGAACGAGTAGTCTAG | 58.822 | 50.000 | 21.50 | 2.41 | 29.56 | 2.43 |
4417 | 4972 | 3.223423 | ACGAGTCGAACGAGTAGTCTA | 57.777 | 47.619 | 21.50 | 0.00 | 29.56 | 2.59 |
4418 | 4973 | 2.077413 | ACGAGTCGAACGAGTAGTCT | 57.923 | 50.000 | 21.50 | 0.00 | 29.56 | 3.24 |
4419 | 4974 | 3.980238 | TTACGAGTCGAACGAGTAGTC | 57.020 | 47.619 | 21.50 | 4.17 | 35.57 | 2.59 |
4420 | 4975 | 3.000277 | CGATTACGAGTCGAACGAGTAGT | 60.000 | 47.826 | 21.50 | 18.06 | 41.40 | 2.73 |
4421 | 4976 | 3.000277 | ACGATTACGAGTCGAACGAGTAG | 60.000 | 47.826 | 21.50 | 7.46 | 41.40 | 2.57 |
4422 | 4977 | 2.923655 | ACGATTACGAGTCGAACGAGTA | 59.076 | 45.455 | 21.50 | 0.00 | 41.40 | 2.59 |
4423 | 4978 | 1.728971 | ACGATTACGAGTCGAACGAGT | 59.271 | 47.619 | 21.50 | 10.42 | 41.40 | 4.18 |
4424 | 4979 | 2.432445 | ACGATTACGAGTCGAACGAG | 57.568 | 50.000 | 21.50 | 9.77 | 41.40 | 4.18 |
4425 | 4980 | 2.498905 | CAACGATTACGAGTCGAACGA | 58.501 | 47.619 | 21.50 | 1.91 | 41.40 | 3.85 |
4426 | 4981 | 1.008745 | GCAACGATTACGAGTCGAACG | 60.009 | 52.381 | 21.50 | 18.87 | 41.40 | 3.95 |
4427 | 4982 | 2.248487 | AGCAACGATTACGAGTCGAAC | 58.752 | 47.619 | 21.50 | 6.28 | 41.40 | 3.95 |
4568 | 5125 | 7.684187 | GCAATGCCATTTTTACTTCTGCCTATA | 60.684 | 37.037 | 0.00 | 0.00 | 0.00 | 1.31 |
4573 | 5130 | 3.995705 | TGCAATGCCATTTTTACTTCTGC | 59.004 | 39.130 | 1.53 | 0.00 | 0.00 | 4.26 |
4574 | 5131 | 6.539324 | CATTGCAATGCCATTTTTACTTCTG | 58.461 | 36.000 | 25.50 | 0.00 | 0.00 | 3.02 |
4646 | 5203 | 5.493133 | TTAAGTGTTTTATGCCTATGCCG | 57.507 | 39.130 | 0.00 | 0.00 | 36.33 | 5.69 |
4652 | 5209 | 8.088365 | GGTCAGAATTTTAAGTGTTTTATGCCT | 58.912 | 33.333 | 0.00 | 0.00 | 0.00 | 4.75 |
4667 | 5224 | 6.265422 | ACTTCATTCTTTCCGGTCAGAATTTT | 59.735 | 34.615 | 21.31 | 6.27 | 37.60 | 1.82 |
4716 | 5274 | 0.755327 | AACACAGGGCAACAGTTCCC | 60.755 | 55.000 | 11.15 | 11.15 | 42.94 | 3.97 |
4722 | 5280 | 3.558321 | GGAGTACATAACACAGGGCAACA | 60.558 | 47.826 | 0.00 | 0.00 | 39.74 | 3.33 |
4735 | 5293 | 6.728411 | TGAAACAGTCCTCTAGGAGTACATA | 58.272 | 40.000 | 6.04 | 0.00 | 45.75 | 2.29 |
4745 | 5303 | 8.598916 | TGGTACATTAAATGAAACAGTCCTCTA | 58.401 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
4908 | 5466 | 7.869429 | ACAAAATCAACAACAATGAGGAAGATC | 59.131 | 33.333 | 0.00 | 0.00 | 0.00 | 2.75 |
5029 | 5587 | 7.178097 | AGCTTGAAAAAGGAGAATAGCTTGATT | 59.822 | 33.333 | 0.00 | 0.00 | 34.29 | 2.57 |
5047 | 5605 | 7.547370 | GCTCTACTAGAGATGAAAAGCTTGAAA | 59.453 | 37.037 | 16.16 | 0.00 | 45.07 | 2.69 |
5096 | 5654 | 3.976701 | CTGGCACCGTGGATGGACC | 62.977 | 68.421 | 0.00 | 0.00 | 39.54 | 4.46 |
5098 | 5656 | 2.927856 | ACTGGCACCGTGGATGGA | 60.928 | 61.111 | 0.00 | 0.00 | 0.00 | 3.41 |
5101 | 5659 | 3.717294 | GGGACTGGCACCGTGGAT | 61.717 | 66.667 | 0.00 | 0.00 | 0.00 | 3.41 |
5150 | 5708 | 1.134461 | AGCACTCATCTCATCAGCACC | 60.134 | 52.381 | 0.00 | 0.00 | 0.00 | 5.01 |
5197 | 5755 | 1.335324 | GCAAGATGGTTGCACACAGAC | 60.335 | 52.381 | 4.87 | 0.00 | 44.34 | 3.51 |
5239 | 5797 | 1.131638 | ACTGTTGCTCCTTGTCCTCA | 58.868 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
5341 | 5899 | 9.212641 | TCTCAAGAGTCTGTGATTCAATAAAAG | 57.787 | 33.333 | 0.00 | 0.00 | 0.00 | 2.27 |
5373 | 5931 | 1.896220 | TTGAGACACATGGCCAACTC | 58.104 | 50.000 | 10.96 | 14.04 | 0.00 | 3.01 |
5380 | 5943 | 3.754850 | TGAAGATGCTTTGAGACACATGG | 59.245 | 43.478 | 0.00 | 0.00 | 0.00 | 3.66 |
5404 | 5967 | 2.812836 | ATCTTCACCACATCCATGCA | 57.187 | 45.000 | 0.00 | 0.00 | 0.00 | 3.96 |
5405 | 5968 | 2.551459 | GCTATCTTCACCACATCCATGC | 59.449 | 50.000 | 0.00 | 0.00 | 0.00 | 4.06 |
5410 | 5973 | 7.550906 | AGAAAAACTAGCTATCTTCACCACATC | 59.449 | 37.037 | 0.00 | 0.00 | 0.00 | 3.06 |
5411 | 5974 | 7.398024 | AGAAAAACTAGCTATCTTCACCACAT | 58.602 | 34.615 | 0.00 | 0.00 | 0.00 | 3.21 |
5412 | 5975 | 6.769512 | AGAAAAACTAGCTATCTTCACCACA | 58.230 | 36.000 | 0.00 | 0.00 | 0.00 | 4.17 |
5413 | 5976 | 7.100409 | AGAGAAAAACTAGCTATCTTCACCAC | 58.900 | 38.462 | 0.00 | 0.00 | 0.00 | 4.16 |
5414 | 5977 | 7.246171 | AGAGAAAAACTAGCTATCTTCACCA | 57.754 | 36.000 | 0.00 | 0.00 | 0.00 | 4.17 |
5415 | 5978 | 8.038351 | AGAAGAGAAAAACTAGCTATCTTCACC | 58.962 | 37.037 | 23.25 | 6.82 | 42.18 | 4.02 |
5416 | 5979 | 8.996024 | AGAAGAGAAAAACTAGCTATCTTCAC | 57.004 | 34.615 | 23.25 | 11.15 | 42.18 | 3.18 |
5418 | 5981 | 9.646427 | TTGAGAAGAGAAAAACTAGCTATCTTC | 57.354 | 33.333 | 17.52 | 17.52 | 40.79 | 2.87 |
5420 | 5983 | 9.651913 | CTTTGAGAAGAGAAAAACTAGCTATCT | 57.348 | 33.333 | 0.00 | 0.00 | 34.71 | 1.98 |
5421 | 5984 | 8.387354 | GCTTTGAGAAGAGAAAAACTAGCTATC | 58.613 | 37.037 | 0.00 | 0.00 | 34.71 | 2.08 |
5422 | 5985 | 8.100164 | AGCTTTGAGAAGAGAAAAACTAGCTAT | 58.900 | 33.333 | 0.00 | 0.00 | 34.71 | 2.97 |
5423 | 5986 | 7.445945 | AGCTTTGAGAAGAGAAAAACTAGCTA | 58.554 | 34.615 | 0.00 | 0.00 | 34.71 | 3.32 |
5428 | 5991 | 9.741647 | CAAAATAGCTTTGAGAAGAGAAAAACT | 57.258 | 29.630 | 0.00 | 0.00 | 46.35 | 2.66 |
5429 | 5992 | 8.972349 | CCAAAATAGCTTTGAGAAGAGAAAAAC | 58.028 | 33.333 | 0.00 | 0.00 | 46.35 | 2.43 |
5430 | 5993 | 8.912988 | TCCAAAATAGCTTTGAGAAGAGAAAAA | 58.087 | 29.630 | 0.00 | 0.00 | 46.35 | 1.94 |
5431 | 5994 | 8.463930 | TCCAAAATAGCTTTGAGAAGAGAAAA | 57.536 | 30.769 | 0.00 | 0.00 | 46.35 | 2.29 |
5432 | 5995 | 7.308830 | GCTCCAAAATAGCTTTGAGAAGAGAAA | 60.309 | 37.037 | 0.00 | 0.00 | 46.35 | 2.52 |
5433 | 5996 | 6.150140 | GCTCCAAAATAGCTTTGAGAAGAGAA | 59.850 | 38.462 | 0.00 | 0.00 | 46.35 | 2.87 |
5434 | 5997 | 5.645497 | GCTCCAAAATAGCTTTGAGAAGAGA | 59.355 | 40.000 | 0.00 | 0.00 | 46.35 | 3.10 |
5435 | 5998 | 5.413833 | TGCTCCAAAATAGCTTTGAGAAGAG | 59.586 | 40.000 | 0.00 | 0.00 | 46.35 | 2.85 |
5436 | 5999 | 5.316167 | TGCTCCAAAATAGCTTTGAGAAGA | 58.684 | 37.500 | 0.00 | 0.00 | 46.35 | 2.87 |
5437 | 6000 | 5.633830 | TGCTCCAAAATAGCTTTGAGAAG | 57.366 | 39.130 | 0.00 | 0.00 | 46.35 | 2.85 |
5438 | 6001 | 6.594788 | ATTGCTCCAAAATAGCTTTGAGAA | 57.405 | 33.333 | 0.00 | 0.00 | 46.35 | 2.87 |
5439 | 6002 | 5.163723 | CGATTGCTCCAAAATAGCTTTGAGA | 60.164 | 40.000 | 0.00 | 0.00 | 46.35 | 3.27 |
5457 | 6020 | 2.523015 | CATCCACAAAGAAGCGATTGC | 58.477 | 47.619 | 0.00 | 0.00 | 43.24 | 3.56 |
5458 | 6021 | 2.095110 | TGCATCCACAAAGAAGCGATTG | 60.095 | 45.455 | 0.00 | 0.00 | 33.23 | 2.67 |
5459 | 6022 | 2.161855 | TGCATCCACAAAGAAGCGATT | 58.838 | 42.857 | 0.00 | 0.00 | 33.23 | 3.34 |
5460 | 6023 | 1.825090 | TGCATCCACAAAGAAGCGAT | 58.175 | 45.000 | 0.00 | 0.00 | 33.23 | 4.58 |
5462 | 6025 | 1.904144 | CATGCATCCACAAAGAAGCG | 58.096 | 50.000 | 0.00 | 0.00 | 33.23 | 4.68 |
5497 | 6062 | 2.489329 | CCTGATCAATTCACCAACGCTT | 59.511 | 45.455 | 0.00 | 0.00 | 0.00 | 4.68 |
5499 | 6064 | 1.468054 | GCCTGATCAATTCACCAACGC | 60.468 | 52.381 | 0.00 | 0.00 | 0.00 | 4.84 |
5500 | 6065 | 1.811965 | TGCCTGATCAATTCACCAACG | 59.188 | 47.619 | 0.00 | 0.00 | 0.00 | 4.10 |
5501 | 6066 | 2.821969 | AGTGCCTGATCAATTCACCAAC | 59.178 | 45.455 | 14.38 | 0.00 | 0.00 | 3.77 |
5538 | 6104 | 0.240945 | CCGCCAACGAATTCTGCTTT | 59.759 | 50.000 | 3.52 | 0.00 | 43.93 | 3.51 |
5550 | 6116 | 0.390472 | CTTCCAGAGTCTCCGCCAAC | 60.390 | 60.000 | 0.00 | 0.00 | 0.00 | 3.77 |
5606 | 6172 | 3.315418 | GGTTCGGTGAAGTCTAACTGTC | 58.685 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
5610 | 6176 | 2.712057 | TCGGTTCGGTGAAGTCTAAC | 57.288 | 50.000 | 0.00 | 0.00 | 0.00 | 2.34 |
5617 | 6183 | 3.264104 | GGAATACAATCGGTTCGGTGAA | 58.736 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
5619 | 6185 | 1.591158 | CGGAATACAATCGGTTCGGTG | 59.409 | 52.381 | 0.00 | 0.00 | 0.00 | 4.94 |
5620 | 6186 | 1.477700 | TCGGAATACAATCGGTTCGGT | 59.522 | 47.619 | 0.00 | 0.00 | 0.00 | 4.69 |
5622 | 6188 | 4.269123 | TCATTTCGGAATACAATCGGTTCG | 59.731 | 41.667 | 0.00 | 0.00 | 0.00 | 3.95 |
5623 | 6189 | 5.728351 | TCATTTCGGAATACAATCGGTTC | 57.272 | 39.130 | 0.00 | 0.00 | 0.00 | 3.62 |
5684 | 6251 | 2.480416 | GGTCGTCCTATGAGCAGAACAG | 60.480 | 54.545 | 0.00 | 0.00 | 32.24 | 3.16 |
5922 | 6505 | 2.425592 | CACTGCGTTCACCAGGGA | 59.574 | 61.111 | 0.00 | 0.00 | 35.76 | 4.20 |
5970 | 6553 | 4.083484 | GCCGCACAGACTTAATACACTTTT | 60.083 | 41.667 | 0.00 | 0.00 | 0.00 | 2.27 |
5980 | 6563 | 2.047274 | GGCAGCCGCACAGACTTA | 60.047 | 61.111 | 0.00 | 0.00 | 41.24 | 2.24 |
5983 | 6566 | 2.980233 | AAAGGCAGCCGCACAGAC | 60.980 | 61.111 | 5.55 | 0.00 | 41.24 | 3.51 |
5984 | 6567 | 2.979676 | CAAAGGCAGCCGCACAGA | 60.980 | 61.111 | 5.55 | 0.00 | 41.24 | 3.41 |
5985 | 6568 | 4.712425 | GCAAAGGCAGCCGCACAG | 62.712 | 66.667 | 5.55 | 0.00 | 41.24 | 3.66 |
6019 | 6604 | 2.123726 | GGATTGCATTCCCGCCCT | 60.124 | 61.111 | 15.47 | 0.00 | 0.00 | 5.19 |
6031 | 6626 | 1.726791 | CAGTCAAACCTCGACGGATTG | 59.273 | 52.381 | 13.85 | 13.85 | 44.50 | 2.67 |
6070 | 6665 | 1.014044 | TTCAGCGCTAAAGCCTGTCG | 61.014 | 55.000 | 10.99 | 0.00 | 39.08 | 4.35 |
6082 | 6677 | 1.326852 | CAGACATCATCAGTTCAGCGC | 59.673 | 52.381 | 0.00 | 0.00 | 0.00 | 5.92 |
6089 | 6684 | 5.809001 | ACCATTTACACAGACATCATCAGT | 58.191 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
6211 | 6811 | 4.758251 | CACGCAGCCATGTCGGGA | 62.758 | 66.667 | 0.00 | 0.00 | 33.12 | 5.14 |
6224 | 6824 | 1.081242 | CAACAGCATCAACCCACGC | 60.081 | 57.895 | 0.00 | 0.00 | 0.00 | 5.34 |
6271 | 6871 | 1.675641 | CAAGCCCACTGCCCTGTAC | 60.676 | 63.158 | 0.00 | 0.00 | 42.71 | 2.90 |
6356 | 6961 | 4.347453 | CAGCCGGCAACTTGGTGC | 62.347 | 66.667 | 31.54 | 1.44 | 44.14 | 5.01 |
6396 | 7001 | 0.606401 | CATCAAAGACCACGGCACCT | 60.606 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
6423 | 7029 | 2.437359 | GCCGCAAGTGGAGATGCT | 60.437 | 61.111 | 3.37 | 0.00 | 40.39 | 3.79 |
6424 | 7030 | 2.437359 | AGCCGCAAGTGGAGATGC | 60.437 | 61.111 | 3.37 | 0.00 | 39.17 | 3.91 |
6425 | 7031 | 1.817099 | GGAGCCGCAAGTGGAGATG | 60.817 | 63.158 | 3.37 | 0.00 | 0.00 | 2.90 |
6426 | 7032 | 1.841302 | TTGGAGCCGCAAGTGGAGAT | 61.841 | 55.000 | 3.37 | 0.00 | 0.00 | 2.75 |
6427 | 7033 | 2.050836 | TTTGGAGCCGCAAGTGGAGA | 62.051 | 55.000 | 3.37 | 0.00 | 0.00 | 3.71 |
6428 | 7034 | 0.962356 | ATTTGGAGCCGCAAGTGGAG | 60.962 | 55.000 | 3.37 | 0.00 | 0.00 | 3.86 |
6429 | 7035 | 1.074775 | ATTTGGAGCCGCAAGTGGA | 59.925 | 52.632 | 3.37 | 0.00 | 0.00 | 4.02 |
6430 | 7036 | 1.213537 | CATTTGGAGCCGCAAGTGG | 59.786 | 57.895 | 0.00 | 0.00 | 0.00 | 4.00 |
6431 | 7037 | 0.109597 | GTCATTTGGAGCCGCAAGTG | 60.110 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
6432 | 7038 | 0.250901 | AGTCATTTGGAGCCGCAAGT | 60.251 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
6433 | 7039 | 0.449388 | GAGTCATTTGGAGCCGCAAG | 59.551 | 55.000 | 0.00 | 0.00 | 0.00 | 4.01 |
6434 | 7040 | 0.960364 | GGAGTCATTTGGAGCCGCAA | 60.960 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
6435 | 7041 | 1.377202 | GGAGTCATTTGGAGCCGCA | 60.377 | 57.895 | 0.00 | 0.00 | 0.00 | 5.69 |
6436 | 7042 | 0.178068 | TAGGAGTCATTTGGAGCCGC | 59.822 | 55.000 | 0.00 | 0.00 | 0.00 | 6.53 |
6437 | 7043 | 1.202580 | CCTAGGAGTCATTTGGAGCCG | 60.203 | 57.143 | 1.05 | 0.00 | 0.00 | 5.52 |
6438 | 7044 | 1.141858 | CCCTAGGAGTCATTTGGAGCC | 59.858 | 57.143 | 11.48 | 0.00 | 0.00 | 4.70 |
6439 | 7045 | 1.475930 | GCCCTAGGAGTCATTTGGAGC | 60.476 | 57.143 | 11.48 | 0.00 | 0.00 | 4.70 |
6440 | 7046 | 1.839994 | TGCCCTAGGAGTCATTTGGAG | 59.160 | 52.381 | 11.48 | 0.00 | 0.00 | 3.86 |
6441 | 7047 | 1.839994 | CTGCCCTAGGAGTCATTTGGA | 59.160 | 52.381 | 11.48 | 0.00 | 0.00 | 3.53 |
6442 | 7048 | 1.561542 | ACTGCCCTAGGAGTCATTTGG | 59.438 | 52.381 | 11.48 | 0.00 | 0.00 | 3.28 |
6443 | 7049 | 3.356529 | AACTGCCCTAGGAGTCATTTG | 57.643 | 47.619 | 11.48 | 0.00 | 0.00 | 2.32 |
6444 | 7050 | 4.388577 | AAAACTGCCCTAGGAGTCATTT | 57.611 | 40.909 | 11.48 | 2.60 | 0.00 | 2.32 |
6445 | 7051 | 4.388577 | AAAAACTGCCCTAGGAGTCATT | 57.611 | 40.909 | 11.48 | 3.34 | 0.00 | 2.57 |
6464 | 7070 | 2.298158 | TTTTCAGCGCCGGCCAAAAA | 62.298 | 50.000 | 23.46 | 18.14 | 41.24 | 1.94 |
6465 | 7071 | 2.298158 | TTTTTCAGCGCCGGCCAAAA | 62.298 | 50.000 | 23.46 | 17.21 | 41.24 | 2.44 |
6466 | 7072 | 2.786495 | TTTTTCAGCGCCGGCCAAA | 61.786 | 52.632 | 23.46 | 12.00 | 41.24 | 3.28 |
6467 | 7073 | 3.219928 | TTTTTCAGCGCCGGCCAA | 61.220 | 55.556 | 23.46 | 5.70 | 41.24 | 4.52 |
6481 | 7087 | 1.278413 | GAGGGCGACTAGGGAGTTTTT | 59.722 | 52.381 | 0.00 | 0.00 | 35.45 | 1.94 |
6482 | 7088 | 0.903236 | GAGGGCGACTAGGGAGTTTT | 59.097 | 55.000 | 0.00 | 0.00 | 35.45 | 2.43 |
6483 | 7089 | 0.252103 | TGAGGGCGACTAGGGAGTTT | 60.252 | 55.000 | 0.00 | 0.00 | 35.45 | 2.66 |
6484 | 7090 | 0.971447 | GTGAGGGCGACTAGGGAGTT | 60.971 | 60.000 | 0.00 | 0.00 | 35.45 | 3.01 |
6485 | 7091 | 1.380112 | GTGAGGGCGACTAGGGAGT | 60.380 | 63.158 | 0.00 | 0.00 | 39.20 | 3.85 |
6486 | 7092 | 0.970937 | TTGTGAGGGCGACTAGGGAG | 60.971 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
6487 | 7093 | 0.970937 | CTTGTGAGGGCGACTAGGGA | 60.971 | 60.000 | 0.00 | 0.00 | 0.00 | 4.20 |
6488 | 7094 | 1.517832 | CTTGTGAGGGCGACTAGGG | 59.482 | 63.158 | 0.00 | 0.00 | 0.00 | 3.53 |
6489 | 7095 | 1.517832 | CCTTGTGAGGGCGACTAGG | 59.482 | 63.158 | 0.00 | 0.00 | 39.55 | 3.02 |
6490 | 7096 | 1.153549 | GCCTTGTGAGGGCGACTAG | 60.154 | 63.158 | 0.00 | 0.00 | 43.75 | 2.57 |
6491 | 7097 | 2.978824 | GCCTTGTGAGGGCGACTA | 59.021 | 61.111 | 0.00 | 0.00 | 43.75 | 2.59 |
6496 | 7102 | 3.876589 | TTCGACGCCTTGTGAGGGC | 62.877 | 63.158 | 0.00 | 0.00 | 43.75 | 5.19 |
6497 | 7103 | 0.673644 | AATTCGACGCCTTGTGAGGG | 60.674 | 55.000 | 0.00 | 0.00 | 43.75 | 4.30 |
6498 | 7104 | 0.721718 | GAATTCGACGCCTTGTGAGG | 59.278 | 55.000 | 0.00 | 0.00 | 46.50 | 3.86 |
6499 | 7105 | 1.391485 | CAGAATTCGACGCCTTGTGAG | 59.609 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
6500 | 7106 | 1.428448 | CAGAATTCGACGCCTTGTGA | 58.572 | 50.000 | 0.00 | 0.00 | 0.00 | 3.58 |
6501 | 7107 | 0.179215 | GCAGAATTCGACGCCTTGTG | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 3.33 |
6502 | 7108 | 1.298859 | GGCAGAATTCGACGCCTTGT | 61.299 | 55.000 | 22.08 | 0.00 | 41.50 | 3.16 |
6503 | 7109 | 1.425428 | GGCAGAATTCGACGCCTTG | 59.575 | 57.895 | 22.08 | 6.75 | 41.50 | 3.61 |
6504 | 7110 | 2.100631 | CGGCAGAATTCGACGCCTT | 61.101 | 57.895 | 24.70 | 0.00 | 42.59 | 4.35 |
6505 | 7111 | 2.509336 | CGGCAGAATTCGACGCCT | 60.509 | 61.111 | 24.70 | 0.00 | 42.59 | 5.52 |
6506 | 7112 | 3.564027 | CCGGCAGAATTCGACGCC | 61.564 | 66.667 | 20.40 | 20.40 | 41.30 | 5.68 |
6507 | 7113 | 2.292802 | GAACCGGCAGAATTCGACGC | 62.293 | 60.000 | 16.69 | 12.71 | 0.00 | 5.19 |
6508 | 7114 | 1.708027 | GAACCGGCAGAATTCGACG | 59.292 | 57.895 | 15.60 | 15.60 | 0.00 | 5.12 |
6509 | 7115 | 1.693083 | CCGAACCGGCAGAATTCGAC | 61.693 | 60.000 | 21.65 | 0.00 | 46.28 | 4.20 |
6510 | 7116 | 1.447140 | CCGAACCGGCAGAATTCGA | 60.447 | 57.895 | 21.65 | 0.00 | 46.28 | 3.71 |
6511 | 7117 | 3.089784 | CCGAACCGGCAGAATTCG | 58.910 | 61.111 | 15.14 | 15.14 | 41.17 | 3.34 |
6534 | 7140 | 2.199613 | TAGGATCGCCGGGCCAAAAA | 62.200 | 55.000 | 14.55 | 0.00 | 39.96 | 1.94 |
6535 | 7141 | 2.602746 | CTAGGATCGCCGGGCCAAAA | 62.603 | 60.000 | 14.55 | 0.00 | 39.96 | 2.44 |
6536 | 7142 | 3.084646 | TAGGATCGCCGGGCCAAA | 61.085 | 61.111 | 14.55 | 0.00 | 39.96 | 3.28 |
6537 | 7143 | 3.546543 | CTAGGATCGCCGGGCCAA | 61.547 | 66.667 | 14.55 | 1.76 | 39.96 | 4.52 |
6544 | 7150 | 2.029221 | GTTCGGCCTAGGATCGCC | 59.971 | 66.667 | 14.75 | 5.18 | 42.05 | 5.54 |
6545 | 7151 | 2.029221 | GGTTCGGCCTAGGATCGC | 59.971 | 66.667 | 14.75 | 3.71 | 0.00 | 4.58 |
6546 | 7152 | 0.538977 | TAGGGTTCGGCCTAGGATCG | 60.539 | 60.000 | 14.75 | 15.49 | 37.43 | 3.69 |
6547 | 7153 | 1.939980 | ATAGGGTTCGGCCTAGGATC | 58.060 | 55.000 | 14.75 | 2.38 | 37.43 | 3.36 |
6548 | 7154 | 2.292323 | CCTATAGGGTTCGGCCTAGGAT | 60.292 | 54.545 | 14.75 | 0.00 | 35.68 | 3.24 |
6549 | 7155 | 1.076677 | CCTATAGGGTTCGGCCTAGGA | 59.923 | 57.143 | 14.75 | 0.00 | 35.68 | 2.94 |
6550 | 7156 | 1.558233 | CCTATAGGGTTCGGCCTAGG | 58.442 | 60.000 | 11.33 | 3.67 | 37.43 | 3.02 |
6562 | 7168 | 0.458543 | CGCATGCTACGCCCTATAGG | 60.459 | 60.000 | 17.13 | 12.27 | 39.47 | 2.57 |
6563 | 7169 | 3.036026 | CGCATGCTACGCCCTATAG | 57.964 | 57.895 | 17.13 | 0.00 | 0.00 | 1.31 |
6576 | 7182 | 2.276244 | CTTCGTTCGCAGCGCATG | 60.276 | 61.111 | 10.87 | 4.82 | 0.00 | 4.06 |
6577 | 7183 | 4.152625 | GCTTCGTTCGCAGCGCAT | 62.153 | 61.111 | 10.87 | 0.00 | 0.00 | 4.73 |
6581 | 7187 | 4.491328 | GCTCGCTTCGTTCGCAGC | 62.491 | 66.667 | 6.76 | 6.76 | 0.00 | 5.25 |
6582 | 7188 | 4.183526 | CGCTCGCTTCGTTCGCAG | 62.184 | 66.667 | 0.00 | 0.00 | 0.00 | 5.18 |
6621 | 7227 | 3.443045 | GTTCCGGCAGCACATGGG | 61.443 | 66.667 | 0.00 | 0.00 | 0.00 | 4.00 |
6622 | 7228 | 3.803082 | CGTTCCGGCAGCACATGG | 61.803 | 66.667 | 0.00 | 0.00 | 0.00 | 3.66 |
6623 | 7229 | 4.465512 | GCGTTCCGGCAGCACATG | 62.466 | 66.667 | 0.00 | 0.00 | 0.00 | 3.21 |
6634 | 7240 | 4.722008 | AAAAACAAGCGGCGTTCC | 57.278 | 50.000 | 9.37 | 0.00 | 0.00 | 3.62 |
6649 | 7255 | 4.724293 | AGGAAAAGGAAACATCCCCAAAAA | 59.276 | 37.500 | 0.00 | 0.00 | 32.16 | 1.94 |
6650 | 7256 | 4.302930 | AGGAAAAGGAAACATCCCCAAAA | 58.697 | 39.130 | 0.00 | 0.00 | 32.16 | 2.44 |
6651 | 7257 | 3.935172 | AGGAAAAGGAAACATCCCCAAA | 58.065 | 40.909 | 0.00 | 0.00 | 32.16 | 3.28 |
6652 | 7258 | 3.628832 | AGGAAAAGGAAACATCCCCAA | 57.371 | 42.857 | 0.00 | 0.00 | 32.16 | 4.12 |
6653 | 7259 | 3.628832 | AAGGAAAAGGAAACATCCCCA | 57.371 | 42.857 | 0.00 | 0.00 | 32.16 | 4.96 |
6654 | 7260 | 4.974645 | AAAAGGAAAAGGAAACATCCCC | 57.025 | 40.909 | 0.00 | 0.00 | 32.16 | 4.81 |
6655 | 7261 | 6.174720 | AGAAAAAGGAAAAGGAAACATCCC | 57.825 | 37.500 | 0.00 | 0.00 | 32.16 | 3.85 |
6656 | 7262 | 8.506168 | AAAAGAAAAAGGAAAAGGAAACATCC | 57.494 | 30.769 | 0.00 | 0.00 | 0.00 | 3.51 |
6657 | 7263 | 9.988350 | GAAAAAGAAAAAGGAAAAGGAAACATC | 57.012 | 29.630 | 0.00 | 0.00 | 0.00 | 3.06 |
6658 | 7264 | 9.739276 | AGAAAAAGAAAAAGGAAAAGGAAACAT | 57.261 | 25.926 | 0.00 | 0.00 | 0.00 | 2.71 |
6659 | 7265 | 9.567776 | AAGAAAAAGAAAAAGGAAAAGGAAACA | 57.432 | 25.926 | 0.00 | 0.00 | 0.00 | 2.83 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.