Multiple sequence alignment - TraesCS7D01G234500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G234500 chr7D 100.000 5358 0 0 1 5358 197146548 197151905 0.000000e+00 9895.0
1 TraesCS7D01G234500 chr7D 85.342 614 67 9 4699 5296 413877920 413878526 9.860000e-172 614.0
2 TraesCS7D01G234500 chr7D 87.417 151 15 4 1 149 620261267 620261119 2.570000e-38 171.0
3 TraesCS7D01G234500 chr7D 89.051 137 14 1 1 136 602850121 602850257 9.230000e-38 169.0
4 TraesCS7D01G234500 chr7A 91.208 1888 103 23 911 2784 206579042 206580880 0.000000e+00 2508.0
5 TraesCS7D01G234500 chr7A 90.387 1914 96 40 2782 4642 206581027 206582905 0.000000e+00 2435.0
6 TraesCS7D01G234500 chr7A 85.645 620 66 12 4699 5296 533507721 533508339 9.790000e-177 630.0
7 TraesCS7D01G234500 chr7A 93.271 431 19 4 3530 3953 79523086 79523513 1.270000e-175 627.0
8 TraesCS7D01G234500 chr7A 79.249 559 35 38 253 736 206570524 206571076 1.120000e-81 315.0
9 TraesCS7D01G234500 chr7A 97.872 141 3 0 134 274 206570113 206570253 1.490000e-60 244.0
10 TraesCS7D01G234500 chr7A 89.552 134 12 2 1 132 26089114 26088981 9.230000e-38 169.0
11 TraesCS7D01G234500 chr7A 95.161 62 1 1 4641 4700 206586234 206586295 4.420000e-16 97.1
12 TraesCS7D01G234500 chr7B 92.161 1735 68 27 2895 4590 161446760 161448465 0.000000e+00 2388.0
13 TraesCS7D01G234500 chr7B 92.635 1059 50 12 1729 2784 161445289 161446322 0.000000e+00 1498.0
14 TraesCS7D01G234500 chr7B 92.070 908 37 11 841 1737 161444231 161445114 0.000000e+00 1245.0
15 TraesCS7D01G234500 chr7B 92.762 677 37 5 3284 3953 712751039 712750368 0.000000e+00 968.0
16 TraesCS7D01G234500 chr7B 85.048 622 69 9 4700 5299 530027349 530026730 3.550000e-171 612.0
17 TraesCS7D01G234500 chr7B 82.616 604 37 34 185 732 161443372 161443963 6.280000e-129 472.0
18 TraesCS7D01G234500 chr7B 94.783 115 6 0 2782 2896 161446484 161446598 4.260000e-41 180.0
19 TraesCS7D01G234500 chr7B 100.000 34 0 0 3284 3317 712751121 712751088 4.480000e-06 63.9
20 TraesCS7D01G234500 chr7B 100.000 34 0 0 3284 3317 712751203 712751170 4.480000e-06 63.9
21 TraesCS7D01G234500 chr3B 93.205 677 34 5 3284 3953 272586475 272585804 0.000000e+00 985.0
22 TraesCS7D01G234500 chr3B 82.787 366 55 8 3984 4345 331553374 331553013 2.410000e-83 320.0
23 TraesCS7D01G234500 chr3B 82.240 366 62 3 3993 4356 73304229 73303865 4.030000e-81 313.0
24 TraesCS7D01G234500 chr3B 100.000 34 0 0 3284 3317 406133619 406133586 4.480000e-06 63.9
25 TraesCS7D01G234500 chr5B 91.285 677 47 5 3284 3953 619682232 619681561 0.000000e+00 913.0
26 TraesCS7D01G234500 chr5B 100.000 34 0 0 3284 3317 619682314 619682281 4.480000e-06 63.9
27 TraesCS7D01G234500 chr6A 93.735 431 17 4 3530 3953 47593410 47592983 5.850000e-179 638.0
28 TraesCS7D01G234500 chr6A 83.138 682 92 10 4700 5358 522643768 522643087 7.680000e-168 601.0
29 TraesCS7D01G234500 chr3D 85.714 623 66 13 4699 5299 104815953 104815332 2.100000e-178 636.0
30 TraesCS7D01G234500 chr3D 85.024 621 70 11 4700 5299 104821400 104820782 1.280000e-170 610.0
31 TraesCS7D01G234500 chr3D 82.703 370 54 10 3981 4345 246328515 246328879 2.410000e-83 320.0
32 TraesCS7D01G234500 chr3D 81.793 368 60 5 3993 4356 46964240 46963876 8.720000e-78 302.0
33 TraesCS7D01G234500 chr3D 92.701 137 9 1 1 136 196925022 196924886 4.230000e-46 196.0
34 TraesCS7D01G234500 chr5D 85.413 617 69 11 4700 5299 530118353 530117741 5.890000e-174 621.0
35 TraesCS7D01G234500 chr2D 85.346 621 64 11 4700 5296 552731418 552732035 7.620000e-173 617.0
36 TraesCS7D01G234500 chr2D 85.000 620 70 10 4699 5296 35321833 35322451 4.590000e-170 608.0
37 TraesCS7D01G234500 chr4A 90.966 321 19 4 3640 3953 669639582 669639899 1.780000e-114 424.0
38 TraesCS7D01G234500 chr3A 82.787 366 55 8 3984 4345 337880874 337880513 2.410000e-83 320.0
39 TraesCS7D01G234500 chr3A 82.289 367 60 5 3993 4356 58683899 58683535 4.030000e-81 313.0
40 TraesCS7D01G234500 chr3A 82.906 234 38 2 3997 4229 58071532 58071300 5.440000e-50 209.0
41 TraesCS7D01G234500 chr3A 91.241 137 11 1 1 136 251325424 251325288 9.160000e-43 185.0
42 TraesCS7D01G234500 chr3A 89.209 139 15 0 1 139 8736786 8736924 1.980000e-39 174.0
43 TraesCS7D01G234500 chr1B 82.292 384 49 11 3979 4345 170514628 170514247 1.120000e-81 315.0
44 TraesCS7D01G234500 chr1B 91.463 82 7 0 3415 3496 170515126 170515045 4.390000e-21 113.0
45 TraesCS7D01G234500 chr1B 89.011 91 3 1 3870 3953 51291642 51291732 7.340000e-19 106.0
46 TraesCS7D01G234500 chr2B 91.971 137 9 2 1 136 715925325 715925190 1.970000e-44 191.0
47 TraesCS7D01G234500 chr1D 90.840 131 8 4 1 129 2591666 2591794 7.130000e-39 172.0
48 TraesCS7D01G234500 chr1D 91.250 80 7 0 3415 3494 111514558 111514479 5.670000e-20 110.0
49 TraesCS7D01G234500 chrUn 87.943 141 14 3 1 139 330895510 330895371 4.290000e-36 163.0
50 TraesCS7D01G234500 chr1A 91.250 80 7 0 3415 3494 117889625 117889546 5.670000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G234500 chr7D 197146548 197151905 5357 False 9895.000000 9895 100.000000 1 5358 1 chr7D.!!$F1 5357
1 TraesCS7D01G234500 chr7D 413877920 413878526 606 False 614.000000 614 85.342000 4699 5296 1 chr7D.!!$F2 597
2 TraesCS7D01G234500 chr7A 206579042 206586295 7253 False 1680.033333 2508 92.252000 911 4700 3 chr7A.!!$F4 3789
3 TraesCS7D01G234500 chr7A 533507721 533508339 618 False 630.000000 630 85.645000 4699 5296 1 chr7A.!!$F2 597
4 TraesCS7D01G234500 chr7A 206570113 206571076 963 False 279.500000 315 88.560500 134 736 2 chr7A.!!$F3 602
5 TraesCS7D01G234500 chr7B 161443372 161448465 5093 False 1156.600000 2388 90.853000 185 4590 5 chr7B.!!$F1 4405
6 TraesCS7D01G234500 chr7B 530026730 530027349 619 True 612.000000 612 85.048000 4700 5299 1 chr7B.!!$R1 599
7 TraesCS7D01G234500 chr7B 712750368 712751203 835 True 365.266667 968 97.587333 3284 3953 3 chr7B.!!$R2 669
8 TraesCS7D01G234500 chr3B 272585804 272586475 671 True 985.000000 985 93.205000 3284 3953 1 chr3B.!!$R2 669
9 TraesCS7D01G234500 chr5B 619681561 619682314 753 True 488.450000 913 95.642500 3284 3953 2 chr5B.!!$R1 669
10 TraesCS7D01G234500 chr6A 522643087 522643768 681 True 601.000000 601 83.138000 4700 5358 1 chr6A.!!$R2 658
11 TraesCS7D01G234500 chr3D 104815332 104815953 621 True 636.000000 636 85.714000 4699 5299 1 chr3D.!!$R2 600
12 TraesCS7D01G234500 chr3D 104820782 104821400 618 True 610.000000 610 85.024000 4700 5299 1 chr3D.!!$R3 599
13 TraesCS7D01G234500 chr5D 530117741 530118353 612 True 621.000000 621 85.413000 4700 5299 1 chr5D.!!$R1 599
14 TraesCS7D01G234500 chr2D 552731418 552732035 617 False 617.000000 617 85.346000 4700 5296 1 chr2D.!!$F2 596
15 TraesCS7D01G234500 chr2D 35321833 35322451 618 False 608.000000 608 85.000000 4699 5296 1 chr2D.!!$F1 597
16 TraesCS7D01G234500 chr1B 170514247 170515126 879 True 214.000000 315 86.877500 3415 4345 2 chr1B.!!$R1 930

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
69 70 0.036022 AGCTTCTGTTGGAGCTGTCC 59.964 55.000 0.00 0.00 44.24 4.02 F
126 127 0.102120 TTTTTGTGCGCCTGTTGGAG 59.898 50.000 4.18 0.00 36.16 3.86 F
506 841 0.174389 TGCCGCAAAGTTTTGAGCAA 59.826 45.000 15.74 5.04 42.23 3.91 F
774 1148 0.174617 GGTCTCAGTAGCAGCCACTC 59.825 60.000 0.00 0.00 0.00 3.51 F
836 1407 0.179084 GCTATAGCCAGTCGCACCAA 60.179 55.000 14.13 0.00 41.38 3.67 F
1432 2025 0.250234 AGTGCTGTGTGTGTGTGTCT 59.750 50.000 0.00 0.00 0.00 3.41 F
1434 2027 0.536724 TGCTGTGTGTGTGTGTCTCT 59.463 50.000 0.00 0.00 0.00 3.10 F
1726 2319 0.592247 GTTGGTCGCTTTGCACACTG 60.592 55.000 0.00 0.00 0.00 3.66 F
1852 2628 0.610174 TGGTTTGGCACTTGCAACAA 59.390 45.000 3.15 0.00 44.36 2.83 F
2317 3094 1.134491 GTGCGGCCAGTTTAGATACCT 60.134 52.381 2.24 0.00 0.00 3.08 F
2785 3727 1.211212 AGAACCAATACCGCCCTTACC 59.789 52.381 0.00 0.00 0.00 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1730 2506 0.252881 AATGGAGGCCAGAGGAGACA 60.253 55.000 5.01 0.0 36.75 3.41 R
2072 2849 0.609131 CCACAAGCCCCAACACTAGG 60.609 60.000 0.00 0.0 0.00 3.02 R
2292 3069 1.203994 TCTAAACTGGCCGCACTAGTC 59.796 52.381 0.00 0.0 39.56 2.59 R
2317 3094 2.350484 CGAGTCGTGTAGTCAAGCAGAA 60.350 50.000 3.82 0.0 0.00 3.02 R
2432 3209 6.891908 AGGACATGTCTTGGCAAATAAACTAT 59.108 34.615 24.50 0.0 33.62 2.12 R
3176 4293 3.995809 TAGGGGAAGGGGAGTGGCG 62.996 68.421 0.00 0.0 0.00 5.69 R
3280 4425 5.480422 TGTTAAGAGCAGTAGACTCCAATCA 59.520 40.000 0.00 0.0 34.56 2.57 R
3671 5074 1.215423 AGACCAGGCAAAAGGTGAACT 59.785 47.619 0.00 0.0 38.50 3.01 R
3949 5395 4.060205 CAGACCGTTCATCATCATGCATA 58.940 43.478 0.00 0.0 0.00 3.14 R
3965 5411 1.033574 GGATCCTGAGTACCAGACCG 58.966 60.000 3.84 0.0 45.78 4.79 R
4678 6151 0.028505 CAACCGCATGCAGTATCAGC 59.971 55.000 19.57 0.0 0.00 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.206578 TAGCTCTTTTTGCGCGTGC 59.793 52.632 15.48 15.48 43.20 5.34
19 20 2.182614 TAGCTCTTTTTGCGCGTGCC 62.183 55.000 19.87 0.00 41.78 5.01
20 21 2.429069 CTCTTTTTGCGCGTGCCC 60.429 61.111 19.87 0.00 41.78 5.36
21 22 3.192954 CTCTTTTTGCGCGTGCCCA 62.193 57.895 19.87 1.49 41.78 5.36
22 23 2.279120 CTTTTTGCGCGTGCCCAA 60.279 55.556 19.87 8.61 41.78 4.12
23 24 1.664333 CTTTTTGCGCGTGCCCAAT 60.664 52.632 19.87 0.00 41.78 3.16
24 25 1.616872 CTTTTTGCGCGTGCCCAATC 61.617 55.000 19.87 0.00 41.78 2.67
25 26 3.565910 TTTTGCGCGTGCCCAATCC 62.566 57.895 19.87 0.00 41.78 3.01
28 29 3.747976 GCGCGTGCCCAATCCTTT 61.748 61.111 10.56 0.00 33.98 3.11
29 30 2.961768 CGCGTGCCCAATCCTTTT 59.038 55.556 0.00 0.00 0.00 2.27
30 31 1.288752 CGCGTGCCCAATCCTTTTT 59.711 52.632 0.00 0.00 0.00 1.94
50 51 3.959520 GCGCGTGCACTATTTTACA 57.040 47.368 17.66 0.00 42.15 2.41
51 52 1.797964 GCGCGTGCACTATTTTACAG 58.202 50.000 17.66 0.00 42.15 2.74
52 53 1.797964 CGCGTGCACTATTTTACAGC 58.202 50.000 16.19 6.39 0.00 4.40
53 54 1.393539 CGCGTGCACTATTTTACAGCT 59.606 47.619 16.19 0.00 0.00 4.24
54 55 2.159707 CGCGTGCACTATTTTACAGCTT 60.160 45.455 16.19 0.00 0.00 3.74
55 56 3.417185 GCGTGCACTATTTTACAGCTTC 58.583 45.455 16.19 0.00 0.00 3.86
56 57 3.125316 GCGTGCACTATTTTACAGCTTCT 59.875 43.478 16.19 0.00 0.00 2.85
57 58 4.641954 CGTGCACTATTTTACAGCTTCTG 58.358 43.478 16.19 0.00 37.52 3.02
59 60 5.334105 CGTGCACTATTTTACAGCTTCTGTT 60.334 40.000 16.19 0.00 42.59 3.16
60 61 5.853282 GTGCACTATTTTACAGCTTCTGTTG 59.147 40.000 10.32 0.00 42.59 3.33
61 62 5.048782 TGCACTATTTTACAGCTTCTGTTGG 60.049 40.000 4.70 0.00 42.59 3.77
62 63 5.181245 GCACTATTTTACAGCTTCTGTTGGA 59.819 40.000 4.70 0.00 42.59 3.53
63 64 6.621596 GCACTATTTTACAGCTTCTGTTGGAG 60.622 42.308 4.70 0.19 42.59 3.86
64 65 4.773323 ATTTTACAGCTTCTGTTGGAGC 57.227 40.909 4.70 0.00 42.59 4.70
65 66 3.492102 TTTACAGCTTCTGTTGGAGCT 57.508 42.857 4.70 0.00 42.59 4.09
67 68 3.319135 CAGCTTCTGTTGGAGCTGT 57.681 52.632 15.93 0.00 46.67 4.40
68 69 1.155042 CAGCTTCTGTTGGAGCTGTC 58.845 55.000 15.93 0.00 46.67 3.51
69 70 0.036022 AGCTTCTGTTGGAGCTGTCC 59.964 55.000 0.00 0.00 44.24 4.02
78 79 4.803426 GAGCTGTCCGGCGTCCAG 62.803 72.222 16.00 16.00 37.29 3.86
80 81 4.373116 GCTGTCCGGCGTCCAGAA 62.373 66.667 22.24 0.00 0.00 3.02
81 82 2.342279 CTGTCCGGCGTCCAGAAA 59.658 61.111 15.43 0.00 0.00 2.52
82 83 1.301401 CTGTCCGGCGTCCAGAAAA 60.301 57.895 15.43 0.00 0.00 2.29
83 84 1.566018 CTGTCCGGCGTCCAGAAAAC 61.566 60.000 15.43 0.00 0.00 2.43
84 85 2.031465 TCCGGCGTCCAGAAAACC 59.969 61.111 6.01 0.00 0.00 3.27
85 86 3.053896 CCGGCGTCCAGAAAACCC 61.054 66.667 6.01 0.00 0.00 4.11
86 87 3.419759 CGGCGTCCAGAAAACCCG 61.420 66.667 0.00 0.00 0.00 5.28
87 88 3.053896 GGCGTCCAGAAAACCCGG 61.054 66.667 0.00 0.00 0.00 5.73
88 89 2.031465 GCGTCCAGAAAACCCGGA 59.969 61.111 0.73 0.00 0.00 5.14
89 90 1.376812 GCGTCCAGAAAACCCGGAT 60.377 57.895 0.73 0.00 0.00 4.18
90 91 0.958876 GCGTCCAGAAAACCCGGATT 60.959 55.000 0.73 0.00 0.00 3.01
91 92 1.530323 CGTCCAGAAAACCCGGATTT 58.470 50.000 0.73 3.51 0.00 2.17
92 93 1.883926 CGTCCAGAAAACCCGGATTTT 59.116 47.619 6.12 6.12 34.46 1.82
93 94 3.075884 CGTCCAGAAAACCCGGATTTTA 58.924 45.455 6.49 0.00 31.90 1.52
94 95 3.502979 CGTCCAGAAAACCCGGATTTTAA 59.497 43.478 6.49 0.00 31.90 1.52
95 96 4.614306 CGTCCAGAAAACCCGGATTTTAAC 60.614 45.833 6.49 2.66 31.90 2.01
96 97 3.502979 TCCAGAAAACCCGGATTTTAACG 59.497 43.478 6.49 0.00 31.90 3.18
97 98 3.239254 CAGAAAACCCGGATTTTAACGC 58.761 45.455 6.49 0.00 31.90 4.84
98 99 2.095617 AGAAAACCCGGATTTTAACGCG 60.096 45.455 6.49 3.53 31.90 6.01
99 100 0.109643 AAACCCGGATTTTAACGCGC 60.110 50.000 5.73 0.00 0.00 6.86
100 101 2.022207 CCCGGATTTTAACGCGCG 59.978 61.111 30.96 30.96 0.00 6.86
101 102 2.022207 CCGGATTTTAACGCGCGG 59.978 61.111 35.22 16.31 0.00 6.46
102 103 2.454464 CCGGATTTTAACGCGCGGA 61.454 57.895 35.22 19.25 0.00 5.54
103 104 1.012671 CGGATTTTAACGCGCGGAG 60.013 57.895 35.22 7.05 0.00 4.63
116 117 4.210447 CGGAGCAGTTTTTGTGCG 57.790 55.556 0.00 0.00 46.06 5.34
117 118 2.010817 CGGAGCAGTTTTTGTGCGC 61.011 57.895 0.00 0.00 46.06 6.09
118 119 3.922175 GAGCAGTTTTTGTGCGCC 58.078 55.556 4.18 0.00 46.06 6.53
119 120 1.360192 GAGCAGTTTTTGTGCGCCT 59.640 52.632 4.18 0.00 46.06 5.52
120 121 0.936297 GAGCAGTTTTTGTGCGCCTG 60.936 55.000 4.18 3.80 46.06 4.85
121 122 1.226945 GCAGTTTTTGTGCGCCTGT 60.227 52.632 4.18 0.00 0.00 4.00
122 123 0.805711 GCAGTTTTTGTGCGCCTGTT 60.806 50.000 4.18 0.00 0.00 3.16
123 124 0.922717 CAGTTTTTGTGCGCCTGTTG 59.077 50.000 4.18 0.00 0.00 3.33
124 125 0.179113 AGTTTTTGTGCGCCTGTTGG 60.179 50.000 4.18 0.00 0.00 3.77
125 126 0.179124 GTTTTTGTGCGCCTGTTGGA 60.179 50.000 4.18 0.00 34.57 3.53
126 127 0.102120 TTTTTGTGCGCCTGTTGGAG 59.898 50.000 4.18 0.00 36.16 3.86
127 128 0.749818 TTTTGTGCGCCTGTTGGAGA 60.750 50.000 4.18 0.00 34.95 3.71
128 129 0.537143 TTTGTGCGCCTGTTGGAGAT 60.537 50.000 4.18 0.00 34.95 2.75
129 130 1.236616 TTGTGCGCCTGTTGGAGATG 61.237 55.000 4.18 0.00 34.95 2.90
130 131 2.747460 TGCGCCTGTTGGAGATGC 60.747 61.111 4.18 0.00 34.95 3.91
131 132 2.437359 GCGCCTGTTGGAGATGCT 60.437 61.111 0.00 0.00 34.95 3.79
132 133 2.042831 GCGCCTGTTGGAGATGCTT 61.043 57.895 0.00 0.00 34.95 3.91
157 158 2.202932 CCGATTCCAGCTCCACCG 60.203 66.667 0.00 0.00 0.00 4.94
274 283 2.808543 AGAACAAGGACGATTTCAGTGC 59.191 45.455 0.00 0.00 0.00 4.40
286 586 2.202987 CAGTGCCCATCTCGGAGC 60.203 66.667 0.00 0.00 36.56 4.70
334 634 4.263572 CCCTGTGGTCACCGGCAA 62.264 66.667 0.00 0.00 34.78 4.52
344 644 4.868116 ACCGGCAACAACCAGCGT 62.868 61.111 0.00 0.00 0.00 5.07
373 680 3.429547 CCACAGAACTAGATCGGTCCAAG 60.430 52.174 2.85 0.00 0.00 3.61
385 697 1.668101 GGTCCAAGCGACGGAGATCT 61.668 60.000 0.00 0.00 42.99 2.75
389 701 0.735471 CAAGCGACGGAGATCTCTCA 59.265 55.000 21.81 0.00 44.60 3.27
397 709 3.379452 ACGGAGATCTCTCAAAATCCCT 58.621 45.455 21.81 0.00 44.60 4.20
400 712 4.021544 CGGAGATCTCTCAAAATCCCTAGG 60.022 50.000 21.81 0.06 44.60 3.02
406 731 5.094387 TCTCTCAAAATCCCTAGGACTTGT 58.906 41.667 11.48 0.00 32.98 3.16
409 734 4.651778 TCAAAATCCCTAGGACTTGTGTG 58.348 43.478 11.48 0.00 32.98 3.82
419 744 4.170468 AGGACTTGTGTGGTCAAAATCT 57.830 40.909 0.00 0.00 35.61 2.40
454 787 1.139947 GTGGAGCTGCGACTCTACC 59.860 63.158 10.15 0.00 41.03 3.18
456 789 2.408241 GGAGCTGCGACTCTACCGT 61.408 63.158 0.00 0.00 36.87 4.83
463 796 1.610038 TGCGACTCTACCGTCTTTTCA 59.390 47.619 0.00 0.00 0.00 2.69
464 797 2.230508 TGCGACTCTACCGTCTTTTCAT 59.769 45.455 0.00 0.00 0.00 2.57
465 798 3.251571 GCGACTCTACCGTCTTTTCATT 58.748 45.455 0.00 0.00 0.00 2.57
466 799 3.303760 GCGACTCTACCGTCTTTTCATTC 59.696 47.826 0.00 0.00 0.00 2.67
469 802 5.061064 CGACTCTACCGTCTTTTCATTCTTG 59.939 44.000 0.00 0.00 0.00 3.02
472 805 2.582052 ACCGTCTTTTCATTCTTGGCA 58.418 42.857 0.00 0.00 0.00 4.92
473 806 2.293399 ACCGTCTTTTCATTCTTGGCAC 59.707 45.455 0.00 0.00 0.00 5.01
474 807 2.293122 CCGTCTTTTCATTCTTGGCACA 59.707 45.455 0.00 0.00 0.00 4.57
490 823 4.099170 CAAGCGAGCACTGCTGCC 62.099 66.667 8.69 0.00 45.53 4.85
506 841 0.174389 TGCCGCAAAGTTTTGAGCAA 59.826 45.000 15.74 5.04 42.23 3.91
513 860 3.060070 GCAAAGTTTTGAGCAATGCAGAC 60.060 43.478 8.35 0.00 40.55 3.51
515 862 1.949525 AGTTTTGAGCAATGCAGACGT 59.050 42.857 8.35 0.00 0.00 4.34
544 891 2.747855 GCTTTGGGCTCGTCCTGG 60.748 66.667 0.00 0.00 38.06 4.45
545 892 2.750350 CTTTGGGCTCGTCCTGGT 59.250 61.111 0.00 0.00 34.39 4.00
546 893 1.376037 CTTTGGGCTCGTCCTGGTC 60.376 63.158 0.00 0.00 34.39 4.02
547 894 2.804828 CTTTGGGCTCGTCCTGGTCC 62.805 65.000 0.00 0.00 34.39 4.46
548 895 3.846405 TTGGGCTCGTCCTGGTCCT 62.846 63.158 0.00 0.00 34.39 3.85
549 896 3.775654 GGGCTCGTCCTGGTCCTG 61.776 72.222 0.00 0.00 34.39 3.86
551 898 3.695606 GCTCGTCCTGGTCCTGCA 61.696 66.667 0.00 0.00 0.00 4.41
552 899 2.575993 CTCGTCCTGGTCCTGCAG 59.424 66.667 6.78 6.78 0.00 4.41
553 900 3.655810 CTCGTCCTGGTCCTGCAGC 62.656 68.421 8.66 0.00 0.00 5.25
554 901 3.699894 CGTCCTGGTCCTGCAGCT 61.700 66.667 8.66 0.00 0.00 4.24
555 902 2.267324 GTCCTGGTCCTGCAGCTC 59.733 66.667 8.66 2.83 0.00 4.09
646 1009 4.489771 GGGTCTCATGGCCACCCG 62.490 72.222 8.16 0.00 40.61 5.28
648 1011 2.363975 GGTCTCATGGCCACCCGTA 61.364 63.158 8.16 0.00 0.00 4.02
678 1049 3.427573 CCCACCTAACTTAACTTTGGGG 58.572 50.000 0.00 0.00 38.89 4.96
732 1106 2.012554 GCCCTCGGGAGCTCTAAAAAC 61.013 57.143 14.64 0.00 37.50 2.43
734 1108 2.290071 CCCTCGGGAGCTCTAAAAACAA 60.290 50.000 14.64 0.00 37.50 2.83
735 1109 3.408634 CCTCGGGAGCTCTAAAAACAAA 58.591 45.455 14.64 0.00 0.00 2.83
736 1110 3.437049 CCTCGGGAGCTCTAAAAACAAAG 59.563 47.826 14.64 0.00 0.00 2.77
737 1111 4.315803 CTCGGGAGCTCTAAAAACAAAGA 58.684 43.478 14.64 0.00 0.00 2.52
738 1112 4.315803 TCGGGAGCTCTAAAAACAAAGAG 58.684 43.478 14.64 0.00 41.82 2.85
739 1113 4.039973 TCGGGAGCTCTAAAAACAAAGAGA 59.960 41.667 14.64 0.00 41.51 3.10
740 1114 4.390297 CGGGAGCTCTAAAAACAAAGAGAG 59.610 45.833 14.64 0.00 41.51 3.20
741 1115 5.552178 GGGAGCTCTAAAAACAAAGAGAGA 58.448 41.667 14.64 0.00 41.51 3.10
742 1116 5.641636 GGGAGCTCTAAAAACAAAGAGAGAG 59.358 44.000 14.64 0.00 41.51 3.20
743 1117 6.459923 GGAGCTCTAAAAACAAAGAGAGAGA 58.540 40.000 14.64 0.00 41.51 3.10
748 1122 7.584485 GCTCTAAAAACAAAGAGAGAGAAAACG 59.416 37.037 3.60 0.00 41.51 3.60
749 1123 8.488651 TCTAAAAACAAAGAGAGAGAAAACGT 57.511 30.769 0.00 0.00 0.00 3.99
763 1137 6.289064 AGAGAAAACGTAAAATGGTCTCAGT 58.711 36.000 0.00 0.00 33.93 3.41
770 1144 2.409948 AAATGGTCTCAGTAGCAGCC 57.590 50.000 0.00 0.00 0.00 4.85
771 1145 1.279496 AATGGTCTCAGTAGCAGCCA 58.721 50.000 0.00 0.00 0.00 4.75
773 1147 0.542938 TGGTCTCAGTAGCAGCCACT 60.543 55.000 0.00 0.00 0.00 4.00
774 1148 0.174617 GGTCTCAGTAGCAGCCACTC 59.825 60.000 0.00 0.00 0.00 3.51
775 1149 0.891373 GTCTCAGTAGCAGCCACTCA 59.109 55.000 0.00 0.00 0.00 3.41
797 1368 0.460284 CACTGTCGCTGGTATCACCC 60.460 60.000 0.00 0.00 37.50 4.61
798 1369 0.614979 ACTGTCGCTGGTATCACCCT 60.615 55.000 0.00 0.00 37.50 4.34
799 1370 0.179100 CTGTCGCTGGTATCACCCTG 60.179 60.000 0.00 0.00 37.50 4.45
800 1371 1.144057 GTCGCTGGTATCACCCTGG 59.856 63.158 0.00 0.00 37.50 4.45
801 1372 1.305802 TCGCTGGTATCACCCTGGT 60.306 57.895 0.00 0.00 37.50 4.00
802 1373 1.144057 CGCTGGTATCACCCTGGTC 59.856 63.158 0.00 0.00 37.50 4.02
803 1374 1.527370 GCTGGTATCACCCTGGTCC 59.473 63.158 0.00 0.00 37.50 4.46
805 1376 1.691482 GCTGGTATCACCCTGGTCCTA 60.691 57.143 0.00 0.00 37.50 2.94
806 1377 2.320781 CTGGTATCACCCTGGTCCTAG 58.679 57.143 0.00 0.00 37.50 3.02
807 1378 1.049402 GGTATCACCCTGGTCCTAGC 58.951 60.000 0.00 0.00 30.04 3.42
808 1379 1.413227 GGTATCACCCTGGTCCTAGCT 60.413 57.143 0.00 0.00 30.04 3.32
810 1381 1.207791 ATCACCCTGGTCCTAGCTTG 58.792 55.000 0.00 0.00 0.00 4.01
811 1382 0.909610 TCACCCTGGTCCTAGCTTGG 60.910 60.000 8.03 8.03 0.00 3.61
812 1383 1.161113 ACCCTGGTCCTAGCTTGGT 59.839 57.895 14.12 0.00 0.00 3.67
813 1384 0.910088 ACCCTGGTCCTAGCTTGGTC 60.910 60.000 14.12 8.47 0.00 4.02
814 1385 1.627297 CCCTGGTCCTAGCTTGGTCC 61.627 65.000 20.34 20.34 36.14 4.46
815 1386 0.618968 CCTGGTCCTAGCTTGGTCCT 60.619 60.000 25.31 0.00 36.48 3.85
816 1387 1.343075 CCTGGTCCTAGCTTGGTCCTA 60.343 57.143 25.31 14.11 36.48 2.94
817 1388 2.035632 CTGGTCCTAGCTTGGTCCTAG 58.964 57.143 25.31 18.19 36.48 3.02
818 1389 0.753867 GGTCCTAGCTTGGTCCTAGC 59.246 60.000 19.98 16.62 38.93 3.42
820 1391 2.424523 GGTCCTAGCTTGGTCCTAGCTA 60.425 54.545 26.87 26.87 46.66 3.32
821 1392 3.502356 GTCCTAGCTTGGTCCTAGCTAT 58.498 50.000 28.20 12.56 46.81 2.97
822 1393 4.508763 GGTCCTAGCTTGGTCCTAGCTATA 60.509 50.000 28.20 19.23 46.81 1.31
823 1394 4.703093 GTCCTAGCTTGGTCCTAGCTATAG 59.297 50.000 28.20 22.88 46.81 1.31
824 1395 3.445805 CCTAGCTTGGTCCTAGCTATAGC 59.554 52.174 28.20 17.33 46.81 2.97
825 1396 2.252714 AGCTTGGTCCTAGCTATAGCC 58.747 52.381 24.19 5.27 46.66 3.93
826 1397 1.971357 GCTTGGTCCTAGCTATAGCCA 59.029 52.381 21.17 6.92 43.38 4.75
827 1398 2.028567 GCTTGGTCCTAGCTATAGCCAG 60.029 54.545 21.17 16.75 43.38 4.85
828 1399 3.235200 CTTGGTCCTAGCTATAGCCAGT 58.765 50.000 21.17 5.65 43.38 4.00
829 1400 2.877866 TGGTCCTAGCTATAGCCAGTC 58.122 52.381 21.17 11.56 43.38 3.51
830 1401 1.813786 GGTCCTAGCTATAGCCAGTCG 59.186 57.143 21.17 5.67 43.38 4.18
831 1402 1.200484 GTCCTAGCTATAGCCAGTCGC 59.800 57.143 21.17 5.74 43.38 5.19
832 1403 1.202891 TCCTAGCTATAGCCAGTCGCA 60.203 52.381 21.17 0.00 43.38 5.10
833 1404 1.068194 CCTAGCTATAGCCAGTCGCAC 60.068 57.143 21.17 0.00 43.38 5.34
834 1405 0.959553 TAGCTATAGCCAGTCGCACC 59.040 55.000 21.17 0.00 43.38 5.01
835 1406 1.043116 AGCTATAGCCAGTCGCACCA 61.043 55.000 21.17 0.00 43.38 4.17
836 1407 0.179084 GCTATAGCCAGTCGCACCAA 60.179 55.000 14.13 0.00 41.38 3.67
837 1408 1.541233 GCTATAGCCAGTCGCACCAAT 60.541 52.381 14.13 0.00 41.38 3.16
838 1409 2.838736 CTATAGCCAGTCGCACCAATT 58.161 47.619 0.00 0.00 41.38 2.32
839 1410 1.382522 ATAGCCAGTCGCACCAATTG 58.617 50.000 0.00 0.00 41.38 2.32
879 1450 3.721035 GCAATTGCTCACTTCAAAAGGT 58.279 40.909 23.21 0.00 38.21 3.50
880 1451 4.122046 GCAATTGCTCACTTCAAAAGGTT 58.878 39.130 23.21 0.00 38.21 3.50
881 1452 4.025480 GCAATTGCTCACTTCAAAAGGTTG 60.025 41.667 23.21 0.00 38.21 3.77
882 1453 5.111293 CAATTGCTCACTTCAAAAGGTTGT 58.889 37.500 0.00 0.00 36.07 3.32
883 1454 3.781079 TGCTCACTTCAAAAGGTTGTG 57.219 42.857 0.00 0.00 36.07 3.33
885 1456 2.687935 GCTCACTTCAAAAGGTTGTGGA 59.312 45.455 0.00 0.00 36.07 4.02
886 1457 3.243201 GCTCACTTCAAAAGGTTGTGGAG 60.243 47.826 0.00 0.00 36.07 3.86
887 1458 3.947834 CTCACTTCAAAAGGTTGTGGAGT 59.052 43.478 0.00 0.00 36.07 3.85
888 1459 3.694072 TCACTTCAAAAGGTTGTGGAGTG 59.306 43.478 13.40 13.40 39.61 3.51
889 1460 2.427095 ACTTCAAAAGGTTGTGGAGTGC 59.573 45.455 0.00 0.00 36.07 4.40
967 1549 1.207085 GCGACCGCGACTAGATAGG 59.793 63.158 8.23 0.00 40.82 2.57
1051 1633 1.457455 CTCCTCCTCCTCCTGCTCC 60.457 68.421 0.00 0.00 0.00 4.70
1164 1749 4.067512 AGGGCTCTCCTCGGCAGA 62.068 66.667 0.00 0.00 44.06 4.26
1271 1856 3.659786 TCTCCATCTGTTTGTGGTTACG 58.340 45.455 0.00 0.00 36.84 3.18
1272 1857 3.322541 TCTCCATCTGTTTGTGGTTACGA 59.677 43.478 0.00 0.00 36.84 3.43
1273 1858 3.395639 TCCATCTGTTTGTGGTTACGAC 58.604 45.455 0.00 0.00 36.84 4.34
1274 1859 2.156891 CCATCTGTTTGTGGTTACGACG 59.843 50.000 0.00 0.00 0.00 5.12
1275 1860 1.855513 TCTGTTTGTGGTTACGACGG 58.144 50.000 0.00 0.00 0.00 4.79
1301 1894 1.005748 GCTTGTTTTGCAGAGCCCC 60.006 57.895 0.00 0.00 0.00 5.80
1310 1903 2.187946 CAGAGCCCCGATGGTGAC 59.812 66.667 0.00 0.00 36.04 3.67
1429 2022 2.470156 ACAGTGCTGTGTGTGTGTG 58.530 52.632 3.80 0.00 43.11 3.82
1430 2023 0.321564 ACAGTGCTGTGTGTGTGTGT 60.322 50.000 3.80 0.00 43.11 3.72
1431 2024 0.374758 CAGTGCTGTGTGTGTGTGTC 59.625 55.000 0.00 0.00 0.00 3.67
1432 2025 0.250234 AGTGCTGTGTGTGTGTGTCT 59.750 50.000 0.00 0.00 0.00 3.41
1433 2026 0.652592 GTGCTGTGTGTGTGTGTCTC 59.347 55.000 0.00 0.00 0.00 3.36
1434 2027 0.536724 TGCTGTGTGTGTGTGTCTCT 59.463 50.000 0.00 0.00 0.00 3.10
1435 2028 1.212616 GCTGTGTGTGTGTGTCTCTC 58.787 55.000 0.00 0.00 0.00 3.20
1436 2029 1.202463 GCTGTGTGTGTGTGTCTCTCT 60.202 52.381 0.00 0.00 0.00 3.10
1473 2066 5.079689 AGAAGTCTTGCTAAGCTAGTTCC 57.920 43.478 0.00 0.00 33.51 3.62
1480 2073 3.955471 TGCTAAGCTAGTTCCATGCTTT 58.045 40.909 4.79 0.00 43.47 3.51
1628 2221 2.425312 GACGGAGAAAGATCTGCTCAGA 59.575 50.000 23.31 1.67 41.51 3.27
1726 2319 0.592247 GTTGGTCGCTTTGCACACTG 60.592 55.000 0.00 0.00 0.00 3.66
1730 2506 1.217882 GTCGCTTTGCACACTGTACT 58.782 50.000 0.00 0.00 0.00 2.73
1740 2516 2.352225 GCACACTGTACTGTCTCCTCTG 60.352 54.545 1.89 0.00 0.00 3.35
1741 2517 2.230025 CACACTGTACTGTCTCCTCTGG 59.770 54.545 1.89 0.00 0.00 3.86
1792 2568 9.173939 CACTAAAAGAAATAACTCTTGCACTTG 57.826 33.333 0.00 0.00 35.79 3.16
1841 2617 3.270877 AGTATCGACAGAATGGTTTGGC 58.729 45.455 0.00 0.00 43.62 4.52
1843 2619 1.234821 TCGACAGAATGGTTTGGCAC 58.765 50.000 0.00 0.00 43.62 5.01
1844 2620 1.202758 TCGACAGAATGGTTTGGCACT 60.203 47.619 0.00 0.00 43.62 4.40
1845 2621 1.608590 CGACAGAATGGTTTGGCACTT 59.391 47.619 0.00 0.00 43.62 3.16
1846 2622 2.605338 CGACAGAATGGTTTGGCACTTG 60.605 50.000 0.00 0.00 43.62 3.16
1847 2623 1.069049 ACAGAATGGTTTGGCACTTGC 59.931 47.619 0.00 0.00 43.62 4.01
1848 2624 1.068895 CAGAATGGTTTGGCACTTGCA 59.931 47.619 3.15 0.00 44.36 4.08
1849 2625 1.761784 AGAATGGTTTGGCACTTGCAA 59.238 42.857 0.00 0.00 44.36 4.08
1850 2626 1.866601 GAATGGTTTGGCACTTGCAAC 59.133 47.619 3.15 0.00 44.36 4.17
1851 2627 0.829333 ATGGTTTGGCACTTGCAACA 59.171 45.000 3.15 0.00 44.36 3.33
1852 2628 0.610174 TGGTTTGGCACTTGCAACAA 59.390 45.000 3.15 0.00 44.36 2.83
1853 2629 1.209019 TGGTTTGGCACTTGCAACAAT 59.791 42.857 3.15 0.00 44.36 2.71
1854 2630 1.598601 GGTTTGGCACTTGCAACAATG 59.401 47.619 3.15 0.00 44.36 2.82
1855 2631 2.278854 GTTTGGCACTTGCAACAATGT 58.721 42.857 3.15 0.00 44.36 2.71
1856 2632 2.677337 GTTTGGCACTTGCAACAATGTT 59.323 40.909 3.15 0.00 44.36 2.71
1857 2633 3.808466 TTGGCACTTGCAACAATGTTA 57.192 38.095 0.00 0.00 44.36 2.41
1858 2634 3.808466 TGGCACTTGCAACAATGTTAA 57.192 38.095 0.00 0.00 44.36 2.01
1859 2635 4.333913 TGGCACTTGCAACAATGTTAAT 57.666 36.364 0.00 0.00 44.36 1.40
1863 2639 5.868801 GGCACTTGCAACAATGTTAATATGT 59.131 36.000 0.00 0.00 44.36 2.29
1918 2695 5.809051 CCGTTTATTTCAGTGGTAGGTCTAC 59.191 44.000 0.00 0.00 35.40 2.59
1933 2710 8.380099 TGGTAGGTCTACAATTGTCTGTAAATT 58.620 33.333 15.85 0.00 37.78 1.82
1990 2767 2.891191 TACGCCAAGGAAAAGGGAAT 57.109 45.000 0.00 0.00 0.00 3.01
2032 2809 6.392354 CATCATGTGAGCAAACCAAATTAGT 58.608 36.000 0.00 0.00 0.00 2.24
2074 2851 9.190317 GTAAAAAGAATATGGGAATGAACTCCT 57.810 33.333 0.00 0.00 35.63 3.69
2125 2902 4.040461 AGCTACAAAAGAGAAGCCTGTACA 59.960 41.667 0.00 0.00 35.54 2.90
2143 2920 7.202016 CTGTACAACTCAGGAAAAGCATAAA 57.798 36.000 0.00 0.00 0.00 1.40
2144 2921 7.575414 TGTACAACTCAGGAAAAGCATAAAA 57.425 32.000 0.00 0.00 0.00 1.52
2292 3069 5.505173 AGATTTGTTTAGATCCATTGGCG 57.495 39.130 0.00 0.00 0.00 5.69
2317 3094 1.134491 GTGCGGCCAGTTTAGATACCT 60.134 52.381 2.24 0.00 0.00 3.08
2364 3141 6.767902 GGCATAGAAATATTTCAGTCAGGACA 59.232 38.462 26.02 4.21 39.61 4.02
2432 3209 3.091545 GCATCTCATCTGGGTTTTGGAA 58.908 45.455 0.00 0.00 0.00 3.53
2478 3255 7.094549 TGTCCTGCACATTGGTAATTTAACTAC 60.095 37.037 0.00 0.00 0.00 2.73
2533 3310 7.225341 GCCAATGACAAAGTTCTCAAAAATCTT 59.775 33.333 0.00 0.00 0.00 2.40
2558 3335 5.692613 TTTGGTTCAAACGTAGGGTTATG 57.307 39.130 0.00 0.00 38.08 1.90
2738 3515 9.599866 CAGTACCTTCATAAACATTGTCTGATA 57.400 33.333 0.00 0.00 0.00 2.15
2785 3727 1.211212 AGAACCAATACCGCCCTTACC 59.789 52.381 0.00 0.00 0.00 2.85
2918 4024 2.554142 TGCCACGCATAAGATTCTCAG 58.446 47.619 0.00 0.00 31.71 3.35
2934 4040 8.097078 AGATTCTCAGCATAAATATCAAGTGC 57.903 34.615 0.00 0.00 36.11 4.40
2936 4042 7.812690 TTCTCAGCATAAATATCAAGTGCAT 57.187 32.000 0.00 0.00 38.23 3.96
3104 4221 1.938577 CTCGTCTTGAATGATGGGCTG 59.061 52.381 0.00 0.00 0.00 4.85
3136 4253 4.332828 ACCATTAGAGTAACTTGGTTGCC 58.667 43.478 0.00 0.00 36.62 4.52
3175 4292 2.257974 TTCGAGCAGCGTAGTTACTG 57.742 50.000 0.00 0.00 41.80 2.74
3953 5399 2.961522 GCATGGCAAATGCATTATGC 57.038 45.000 22.49 22.49 44.00 3.14
3974 5420 3.741075 GCATGATGATGAACGGTCTGGTA 60.741 47.826 0.33 0.00 0.00 3.25
4293 5754 0.325296 TACGACATCCAGGGAGGCTT 60.325 55.000 0.00 0.00 37.29 4.35
4358 5819 1.243902 GAACGTGAAATGCCCCTGAA 58.756 50.000 0.00 0.00 0.00 3.02
4359 5820 1.611491 GAACGTGAAATGCCCCTGAAA 59.389 47.619 0.00 0.00 0.00 2.69
4500 5970 1.475930 GGTCTTTAGCTCCTGGATGCC 60.476 57.143 12.53 0.00 0.00 4.40
4518 5988 0.387202 CCTATGAGCACTCGAGGGTG 59.613 60.000 17.64 8.56 39.91 4.61
4546 6016 8.571336 AGAGGAATCTGTAAATTTTGACAAGTG 58.429 33.333 0.00 0.00 0.00 3.16
4547 6017 7.147976 AGGAATCTGTAAATTTTGACAAGTGC 58.852 34.615 0.00 0.00 0.00 4.40
4548 6018 6.088085 GGAATCTGTAAATTTTGACAAGTGCG 59.912 38.462 0.00 0.00 0.00 5.34
4549 6019 5.493133 TCTGTAAATTTTGACAAGTGCGT 57.507 34.783 0.00 0.00 0.00 5.24
4550 6020 5.270083 TCTGTAAATTTTGACAAGTGCGTG 58.730 37.500 0.00 0.00 0.00 5.34
4597 6067 3.581755 CTGCGTAAGTAGCACCAGTTTA 58.418 45.455 0.00 0.00 44.83 2.01
4621 6093 2.476619 CTGTACCGCTTCAGTGTTTCTG 59.523 50.000 0.00 0.00 44.85 3.02
4623 6095 1.205064 CCGCTTCAGTGTTTCTGCG 59.795 57.895 0.00 0.00 43.32 5.18
4628 6100 2.939103 GCTTCAGTGTTTCTGCGGATAT 59.061 45.455 0.00 0.00 43.32 1.63
4644 6117 5.648033 CGGATATATCGCATTTCATCCTG 57.352 43.478 6.64 0.00 31.64 3.86
4646 6119 5.006068 CGGATATATCGCATTTCATCCTGTG 59.994 44.000 6.64 0.00 31.64 3.66
4647 6120 6.108687 GGATATATCGCATTTCATCCTGTGA 58.891 40.000 6.64 0.00 36.43 3.58
4648 6121 6.765036 GGATATATCGCATTTCATCCTGTGAT 59.235 38.462 6.64 4.29 43.17 3.06
4649 6122 7.928167 GGATATATCGCATTTCATCCTGTGATA 59.072 37.037 6.64 7.90 44.47 2.15
4650 6123 8.883954 ATATATCGCATTTCATCCTGTGATAG 57.116 34.615 10.45 0.00 43.93 2.08
4651 6124 4.670896 TCGCATTTCATCCTGTGATAGA 57.329 40.909 0.00 0.00 36.54 1.98
4653 6126 5.233225 TCGCATTTCATCCTGTGATAGATC 58.767 41.667 0.00 0.00 36.54 2.75
4656 6129 6.228995 GCATTTCATCCTGTGATAGATCTCA 58.771 40.000 0.00 0.00 36.54 3.27
4657 6130 6.369340 GCATTTCATCCTGTGATAGATCTCAG 59.631 42.308 0.00 12.58 44.04 3.35
4660 6133 7.757941 TTCATCCTGTGATAGATCTCAGTAG 57.242 40.000 16.41 8.72 43.33 2.57
4661 6134 5.709631 TCATCCTGTGATAGATCTCAGTAGC 59.290 44.000 16.41 0.00 43.33 3.58
4663 6136 5.069318 TCCTGTGATAGATCTCAGTAGCTG 58.931 45.833 16.41 5.24 43.33 4.24
4665 6138 5.278414 CCTGTGATAGATCTCAGTAGCTGTG 60.278 48.000 16.41 0.00 43.33 3.66
4667 6140 4.037327 GTGATAGATCTCAGTAGCTGTGCA 59.963 45.833 0.00 0.00 32.61 4.57
4669 6142 3.455990 AGATCTCAGTAGCTGTGCATG 57.544 47.619 0.00 0.00 32.61 4.06
4670 6143 2.102757 AGATCTCAGTAGCTGTGCATGG 59.897 50.000 0.00 0.00 32.61 3.66
4671 6144 1.560505 TCTCAGTAGCTGTGCATGGA 58.439 50.000 0.00 0.00 32.61 3.41
4673 6146 2.302733 TCTCAGTAGCTGTGCATGGAAA 59.697 45.455 0.00 0.00 32.61 3.13
4674 6147 2.676839 CTCAGTAGCTGTGCATGGAAAG 59.323 50.000 0.00 0.00 32.61 2.62
4675 6148 2.038952 TCAGTAGCTGTGCATGGAAAGT 59.961 45.455 6.25 0.00 32.61 2.66
4676 6149 2.816087 CAGTAGCTGTGCATGGAAAGTT 59.184 45.455 6.25 2.38 0.00 2.66
4677 6150 4.002982 CAGTAGCTGTGCATGGAAAGTTA 58.997 43.478 6.25 1.30 0.00 2.24
4678 6151 4.093998 CAGTAGCTGTGCATGGAAAGTTAG 59.906 45.833 6.25 0.00 0.00 2.34
4679 6152 1.815003 AGCTGTGCATGGAAAGTTAGC 59.185 47.619 6.25 3.82 0.00 3.09
4680 6153 1.815003 GCTGTGCATGGAAAGTTAGCT 59.185 47.619 6.25 0.00 0.00 3.32
4681 6154 2.415090 GCTGTGCATGGAAAGTTAGCTG 60.415 50.000 6.25 0.00 0.00 4.24
4683 6156 3.689347 TGTGCATGGAAAGTTAGCTGAT 58.311 40.909 0.00 0.00 0.00 2.90
4685 6158 4.635765 TGTGCATGGAAAGTTAGCTGATAC 59.364 41.667 0.00 0.00 0.00 2.24
4686 6159 4.878397 GTGCATGGAAAGTTAGCTGATACT 59.122 41.667 0.00 0.00 0.00 2.12
4687 6160 4.877823 TGCATGGAAAGTTAGCTGATACTG 59.122 41.667 0.00 0.00 0.00 2.74
4688 6161 4.260948 GCATGGAAAGTTAGCTGATACTGC 60.261 45.833 0.00 0.00 0.00 4.40
4689 6162 4.551702 TGGAAAGTTAGCTGATACTGCA 57.448 40.909 0.00 0.00 0.00 4.41
4690 6163 5.102953 TGGAAAGTTAGCTGATACTGCAT 57.897 39.130 0.00 0.00 0.00 3.96
4692 6165 4.260948 GGAAAGTTAGCTGATACTGCATGC 60.261 45.833 11.82 11.82 0.00 4.06
4693 6166 2.477825 AGTTAGCTGATACTGCATGCG 58.522 47.619 14.09 10.50 0.00 4.73
4694 6167 1.528586 GTTAGCTGATACTGCATGCGG 59.471 52.381 25.08 25.08 0.00 5.69
4695 6168 0.752658 TAGCTGATACTGCATGCGGT 59.247 50.000 33.24 33.24 39.18 5.68
4696 6169 0.107508 AGCTGATACTGCATGCGGTT 60.108 50.000 35.52 22.77 36.80 4.44
4697 6170 0.028505 GCTGATACTGCATGCGGTTG 59.971 55.000 35.52 22.65 36.80 3.77
4717 6433 7.476667 CGGTTGTTGTTGGAAATATTAGCATA 58.523 34.615 0.00 0.00 0.00 3.14
4825 6543 6.529125 CGTACAGTACATAGAACCGAAACATT 59.471 38.462 11.37 0.00 0.00 2.71
4834 6552 8.956426 ACATAGAACCGAAACATTTATGAACAT 58.044 29.630 0.00 0.00 0.00 2.71
4865 6583 2.159653 GGTCAGCACATAAACGAGCAAG 60.160 50.000 0.00 0.00 0.00 4.01
4892 6610 2.526888 TGAACGAGTCATACCCTCCT 57.473 50.000 0.00 0.00 0.00 3.69
4901 6619 0.331278 CATACCCTCCTGTTGGCCAA 59.669 55.000 16.05 16.05 0.00 4.52
4904 6622 2.115910 CCTCCTGTTGGCCAAGCA 59.884 61.111 21.21 18.26 0.00 3.91
4972 7950 1.273886 TCGTCGTCAACCATGGAATCA 59.726 47.619 21.47 0.00 0.00 2.57
4974 7952 2.482336 CGTCGTCAACCATGGAATCAAA 59.518 45.455 21.47 0.00 0.00 2.69
4975 7953 3.058570 CGTCGTCAACCATGGAATCAAAA 60.059 43.478 21.47 0.00 0.00 2.44
5058 8043 1.551452 CCCCAAAACCTTATTGCCGA 58.449 50.000 0.00 0.00 0.00 5.54
5065 8050 1.507140 ACCTTATTGCCGATCTCCCA 58.493 50.000 0.00 0.00 0.00 4.37
5067 8052 1.694150 CCTTATTGCCGATCTCCCAGA 59.306 52.381 0.00 0.00 0.00 3.86
5070 8055 1.135094 ATTGCCGATCTCCCAGACAT 58.865 50.000 0.00 0.00 0.00 3.06
5086 8071 5.410924 CCAGACATGATCTTAAACGACAGA 58.589 41.667 0.00 0.00 34.41 3.41
5109 8094 1.675801 CAGAGGCACTTGCTCTCCA 59.324 57.895 13.09 0.00 41.55 3.86
5149 8135 1.900016 TCGGTATGGGATCGTCGGG 60.900 63.158 0.00 0.00 0.00 5.14
5165 8151 1.881903 CGGGAGCAGCACAGAGAGAA 61.882 60.000 0.00 0.00 0.00 2.87
5166 8152 0.322975 GGGAGCAGCACAGAGAGAAA 59.677 55.000 0.00 0.00 0.00 2.52
5196 8182 0.887387 GACGGCTAGGGTTGTGCAAA 60.887 55.000 0.00 0.00 0.00 3.68
5305 8294 1.153628 CCGAGTCCGTGATCCAACC 60.154 63.158 0.00 0.00 0.00 3.77
5323 8312 0.904865 CCTCCTGGACTGTGGCACTA 60.905 60.000 19.83 4.41 34.57 2.74
5325 8314 0.178932 TCCTGGACTGTGGCACTACT 60.179 55.000 19.83 0.21 0.00 2.57
5330 9426 2.036733 TGGACTGTGGCACTACTGTAAC 59.963 50.000 19.83 9.20 33.63 2.50
5331 9427 2.036733 GGACTGTGGCACTACTGTAACA 59.963 50.000 19.83 0.00 33.63 2.41
5333 9429 3.463944 ACTGTGGCACTACTGTAACAAC 58.536 45.455 19.83 0.00 32.01 3.32
5334 9430 3.134081 ACTGTGGCACTACTGTAACAACT 59.866 43.478 19.83 0.00 32.01 3.16
5335 9431 3.724374 TGTGGCACTACTGTAACAACTC 58.276 45.455 19.83 0.00 0.00 3.01
5336 9432 3.386726 TGTGGCACTACTGTAACAACTCT 59.613 43.478 19.83 0.00 0.00 3.24
5337 9433 4.141801 TGTGGCACTACTGTAACAACTCTT 60.142 41.667 19.83 0.00 0.00 2.85
5338 9434 4.448060 GTGGCACTACTGTAACAACTCTTC 59.552 45.833 11.13 0.00 0.00 2.87
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.206578 GCACGCGCAAAAAGAGCTA 59.793 52.632 5.73 0.00 41.30 3.32
1 2 2.050985 GCACGCGCAAAAAGAGCT 60.051 55.556 5.73 0.00 41.30 4.09
2 3 3.099574 GGCACGCGCAAAAAGAGC 61.100 61.111 5.73 0.00 41.24 4.09
3 4 2.429069 GGGCACGCGCAAAAAGAG 60.429 61.111 5.73 0.00 41.24 2.85
4 5 2.775856 TTGGGCACGCGCAAAAAGA 61.776 52.632 17.88 0.00 44.04 2.52
5 6 2.279120 TTGGGCACGCGCAAAAAG 60.279 55.556 17.88 0.00 44.04 2.27
11 12 2.763627 AAAAAGGATTGGGCACGCGC 62.764 55.000 5.73 0.00 37.44 6.86
12 13 1.288752 AAAAAGGATTGGGCACGCG 59.711 52.632 3.53 3.53 0.00 6.01
32 33 1.797964 CTGTAAAATAGTGCACGCGC 58.202 50.000 12.01 0.00 39.24 6.86
33 34 1.393539 AGCTGTAAAATAGTGCACGCG 59.606 47.619 12.01 3.53 0.00 6.01
34 35 3.125316 AGAAGCTGTAAAATAGTGCACGC 59.875 43.478 12.01 5.29 0.00 5.34
35 36 4.152402 ACAGAAGCTGTAAAATAGTGCACG 59.848 41.667 12.01 0.00 43.46 5.34
36 37 5.613358 ACAGAAGCTGTAAAATAGTGCAC 57.387 39.130 9.40 9.40 43.46 4.57
37 38 5.048782 CCAACAGAAGCTGTAAAATAGTGCA 60.049 40.000 0.00 0.00 44.62 4.57
38 39 5.181245 TCCAACAGAAGCTGTAAAATAGTGC 59.819 40.000 0.00 0.00 44.62 4.40
39 40 6.621596 GCTCCAACAGAAGCTGTAAAATAGTG 60.622 42.308 0.00 0.00 44.62 2.74
40 41 5.412904 GCTCCAACAGAAGCTGTAAAATAGT 59.587 40.000 0.00 0.00 44.62 2.12
41 42 5.645497 AGCTCCAACAGAAGCTGTAAAATAG 59.355 40.000 0.00 0.00 44.62 1.73
42 43 5.412594 CAGCTCCAACAGAAGCTGTAAAATA 59.587 40.000 14.57 0.00 44.62 1.40
43 44 4.217118 CAGCTCCAACAGAAGCTGTAAAAT 59.783 41.667 14.57 0.00 44.62 1.82
44 45 3.565482 CAGCTCCAACAGAAGCTGTAAAA 59.435 43.478 14.57 0.00 44.62 1.52
45 46 3.141398 CAGCTCCAACAGAAGCTGTAAA 58.859 45.455 14.57 0.00 44.62 2.01
46 47 2.771089 CAGCTCCAACAGAAGCTGTAA 58.229 47.619 14.57 0.00 44.62 2.41
47 48 2.462456 CAGCTCCAACAGAAGCTGTA 57.538 50.000 14.57 0.00 44.62 2.74
50 51 0.036022 GGACAGCTCCAACAGAAGCT 59.964 55.000 0.00 0.00 36.42 3.74
51 52 1.294659 CGGACAGCTCCAACAGAAGC 61.295 60.000 0.00 0.00 36.12 3.86
52 53 0.671781 CCGGACAGCTCCAACAGAAG 60.672 60.000 0.00 0.00 36.12 2.85
53 54 1.371183 CCGGACAGCTCCAACAGAA 59.629 57.895 0.00 0.00 36.12 3.02
54 55 3.059982 CCGGACAGCTCCAACAGA 58.940 61.111 0.00 0.00 36.12 3.41
55 56 2.743928 GCCGGACAGCTCCAACAG 60.744 66.667 5.05 0.00 36.12 3.16
56 57 4.680237 CGCCGGACAGCTCCAACA 62.680 66.667 5.05 0.00 36.12 3.33
57 58 4.681978 ACGCCGGACAGCTCCAAC 62.682 66.667 5.05 0.00 36.12 3.77
58 59 4.373116 GACGCCGGACAGCTCCAA 62.373 66.667 5.05 0.00 36.12 3.53
61 62 4.803426 CTGGACGCCGGACAGCTC 62.803 72.222 5.05 0.00 29.82 4.09
63 64 3.876589 TTTCTGGACGCCGGACAGC 62.877 63.158 5.05 0.00 38.83 4.40
64 65 1.301401 TTTTCTGGACGCCGGACAG 60.301 57.895 5.05 7.65 38.83 3.51
65 66 1.595929 GTTTTCTGGACGCCGGACA 60.596 57.895 5.05 0.00 38.83 4.02
66 67 2.322830 GGTTTTCTGGACGCCGGAC 61.323 63.158 5.05 0.00 38.83 4.79
67 68 2.031465 GGTTTTCTGGACGCCGGA 59.969 61.111 5.05 3.61 37.09 5.14
68 69 3.053896 GGGTTTTCTGGACGCCGG 61.054 66.667 0.00 0.00 0.00 6.13
69 70 3.419759 CGGGTTTTCTGGACGCCG 61.420 66.667 0.00 0.00 0.00 6.46
70 71 3.053896 CCGGGTTTTCTGGACGCC 61.054 66.667 0.00 0.00 44.90 5.68
71 72 2.031465 TCCGGGTTTTCTGGACGC 59.969 61.111 0.00 0.00 45.65 5.19
75 76 3.828786 CGTTAAAATCCGGGTTTTCTGG 58.171 45.455 28.19 14.41 43.43 3.86
76 77 3.239254 GCGTTAAAATCCGGGTTTTCTG 58.761 45.455 28.19 18.97 33.62 3.02
77 78 2.095617 CGCGTTAAAATCCGGGTTTTCT 60.096 45.455 28.19 9.23 33.62 2.52
78 79 2.244251 CGCGTTAAAATCCGGGTTTTC 58.756 47.619 28.19 14.39 33.62 2.29
79 80 1.666599 GCGCGTTAAAATCCGGGTTTT 60.667 47.619 27.53 27.53 38.99 2.43
80 81 0.109643 GCGCGTTAAAATCCGGGTTT 60.110 50.000 6.94 6.94 38.99 3.27
81 82 1.503091 GCGCGTTAAAATCCGGGTT 59.497 52.632 8.43 0.00 38.99 4.11
82 83 2.742738 CGCGCGTTAAAATCCGGGT 61.743 57.895 24.19 0.00 38.99 5.28
83 84 2.022207 CGCGCGTTAAAATCCGGG 59.978 61.111 24.19 0.00 39.66 5.73
84 85 2.022207 CCGCGCGTTAAAATCCGG 59.978 61.111 29.95 5.43 0.00 5.14
85 86 1.012671 CTCCGCGCGTTAAAATCCG 60.013 57.895 29.95 9.95 0.00 4.18
86 87 1.297378 GCTCCGCGCGTTAAAATCC 60.297 57.895 29.95 3.92 0.00 3.01
87 88 0.586502 CTGCTCCGCGCGTTAAAATC 60.587 55.000 29.95 10.43 43.27 2.17
88 89 1.296056 ACTGCTCCGCGCGTTAAAAT 61.296 50.000 29.95 7.04 43.27 1.82
89 90 1.500512 AACTGCTCCGCGCGTTAAAA 61.501 50.000 29.95 9.13 43.27 1.52
90 91 1.500512 AAACTGCTCCGCGCGTTAAA 61.501 50.000 29.95 10.67 43.27 1.52
91 92 1.500512 AAAACTGCTCCGCGCGTTAA 61.501 50.000 29.95 12.82 43.27 2.01
92 93 1.500512 AAAAACTGCTCCGCGCGTTA 61.501 50.000 29.95 15.58 43.27 3.18
93 94 2.830285 AAAAACTGCTCCGCGCGTT 61.830 52.632 29.95 12.50 43.27 4.84
94 95 3.276846 AAAAACTGCTCCGCGCGT 61.277 55.556 29.95 5.64 43.27 6.01
95 96 2.796617 CAAAAACTGCTCCGCGCG 60.797 61.111 25.67 25.67 43.27 6.86
96 97 2.010817 CACAAAAACTGCTCCGCGC 61.011 57.895 0.00 0.00 39.77 6.86
97 98 2.010817 GCACAAAAACTGCTCCGCG 61.011 57.895 0.00 0.00 0.00 6.46
98 99 2.010817 CGCACAAAAACTGCTCCGC 61.011 57.895 0.00 0.00 32.03 5.54
99 100 2.010817 GCGCACAAAAACTGCTCCG 61.011 57.895 0.30 0.00 32.03 4.63
100 101 1.661509 GGCGCACAAAAACTGCTCC 60.662 57.895 10.83 0.00 32.57 4.70
101 102 0.936297 CAGGCGCACAAAAACTGCTC 60.936 55.000 10.83 0.00 32.03 4.26
102 103 1.066257 CAGGCGCACAAAAACTGCT 59.934 52.632 10.83 0.00 32.03 4.24
103 104 0.805711 AACAGGCGCACAAAAACTGC 60.806 50.000 10.83 0.00 32.60 4.40
104 105 0.922717 CAACAGGCGCACAAAAACTG 59.077 50.000 10.83 7.96 35.40 3.16
105 106 0.179113 CCAACAGGCGCACAAAAACT 60.179 50.000 10.83 0.00 0.00 2.66
106 107 0.179124 TCCAACAGGCGCACAAAAAC 60.179 50.000 10.83 0.00 0.00 2.43
107 108 0.102120 CTCCAACAGGCGCACAAAAA 59.898 50.000 10.83 0.00 0.00 1.94
108 109 0.749818 TCTCCAACAGGCGCACAAAA 60.750 50.000 10.83 0.00 0.00 2.44
109 110 0.537143 ATCTCCAACAGGCGCACAAA 60.537 50.000 10.83 0.00 0.00 2.83
110 111 1.073025 ATCTCCAACAGGCGCACAA 59.927 52.632 10.83 0.00 0.00 3.33
111 112 1.672030 CATCTCCAACAGGCGCACA 60.672 57.895 10.83 0.00 0.00 4.57
112 113 3.044059 GCATCTCCAACAGGCGCAC 62.044 63.158 10.83 0.00 0.00 5.34
113 114 2.747460 GCATCTCCAACAGGCGCA 60.747 61.111 10.83 0.00 0.00 6.09
114 115 1.589716 AAAGCATCTCCAACAGGCGC 61.590 55.000 0.00 0.00 0.00 6.53
115 116 0.883833 AAAAGCATCTCCAACAGGCG 59.116 50.000 0.00 0.00 0.00 5.52
116 117 3.507622 ACTTAAAAGCATCTCCAACAGGC 59.492 43.478 0.00 0.00 0.00 4.85
117 118 4.616835 GCACTTAAAAGCATCTCCAACAGG 60.617 45.833 0.00 0.00 0.00 4.00
118 119 4.479619 GCACTTAAAAGCATCTCCAACAG 58.520 43.478 0.00 0.00 0.00 3.16
119 120 3.255642 GGCACTTAAAAGCATCTCCAACA 59.744 43.478 1.79 0.00 0.00 3.33
120 121 3.670627 CGGCACTTAAAAGCATCTCCAAC 60.671 47.826 1.79 0.00 0.00 3.77
121 122 2.487762 CGGCACTTAAAAGCATCTCCAA 59.512 45.455 1.79 0.00 0.00 3.53
122 123 2.083774 CGGCACTTAAAAGCATCTCCA 58.916 47.619 1.79 0.00 0.00 3.86
123 124 2.356135 TCGGCACTTAAAAGCATCTCC 58.644 47.619 1.79 0.00 0.00 3.71
124 125 4.496507 GGAATCGGCACTTAAAAGCATCTC 60.497 45.833 1.79 0.00 0.00 2.75
125 126 3.378427 GGAATCGGCACTTAAAAGCATCT 59.622 43.478 1.79 0.00 0.00 2.90
126 127 3.128589 TGGAATCGGCACTTAAAAGCATC 59.871 43.478 1.79 0.00 0.00 3.91
127 128 3.088532 TGGAATCGGCACTTAAAAGCAT 58.911 40.909 1.79 0.00 0.00 3.79
128 129 2.487762 CTGGAATCGGCACTTAAAAGCA 59.512 45.455 1.79 0.00 0.00 3.91
129 130 2.732282 GCTGGAATCGGCACTTAAAAGC 60.732 50.000 0.00 0.00 44.43 3.51
130 131 3.136808 GCTGGAATCGGCACTTAAAAG 57.863 47.619 0.00 0.00 44.43 2.27
274 283 0.755079 TCATTCAGCTCCGAGATGGG 59.245 55.000 13.55 4.51 38.76 4.00
286 586 5.279910 GGACAGGGATCTAGGATTCATTCAG 60.280 48.000 0.00 0.00 0.00 3.02
344 644 4.556233 CGATCTAGTTCTGTGGTGAACAA 58.444 43.478 9.56 0.00 46.19 2.83
373 680 2.279582 TTTTGAGAGATCTCCGTCGC 57.720 50.000 19.30 4.86 42.20 5.19
385 697 4.597507 ACACAAGTCCTAGGGATTTTGAGA 59.402 41.667 9.46 0.00 34.78 3.27
389 701 3.397955 ACCACACAAGTCCTAGGGATTTT 59.602 43.478 9.46 0.00 29.07 1.82
397 709 5.304686 AGATTTTGACCACACAAGTCCTA 57.695 39.130 0.00 0.00 33.09 2.94
400 712 5.043248 CCAAAGATTTTGACCACACAAGTC 58.957 41.667 3.24 0.00 34.72 3.01
406 731 2.627699 GGCTCCAAAGATTTTGACCACA 59.372 45.455 3.24 0.00 0.00 4.17
409 734 1.202348 CGGGCTCCAAAGATTTTGACC 59.798 52.381 3.24 2.44 0.00 4.02
419 744 2.671619 CTTTCCGCGGGCTCCAAA 60.672 61.111 27.83 16.78 0.00 3.28
440 773 0.961358 AAGACGGTAGAGTCGCAGCT 60.961 55.000 0.00 0.00 45.26 4.24
444 777 2.342910 TGAAAAGACGGTAGAGTCGC 57.657 50.000 0.00 0.00 45.26 5.19
454 787 3.624326 TGTGCCAAGAATGAAAAGACG 57.376 42.857 0.00 0.00 0.00 4.18
456 789 3.550639 CGCTTGTGCCAAGAATGAAAAGA 60.551 43.478 16.28 0.00 35.36 2.52
463 796 0.890542 TGCTCGCTTGTGCCAAGAAT 60.891 50.000 16.28 0.00 35.36 2.40
464 797 1.525765 TGCTCGCTTGTGCCAAGAA 60.526 52.632 16.28 5.21 35.36 2.52
465 798 2.110835 TGCTCGCTTGTGCCAAGA 59.889 55.556 16.28 0.00 35.36 3.02
466 799 2.253452 GTGCTCGCTTGTGCCAAG 59.747 61.111 9.75 9.75 35.36 3.61
469 802 4.395583 GCAGTGCTCGCTTGTGCC 62.396 66.667 8.18 0.00 35.36 5.01
490 823 1.859703 TGCATTGCTCAAAACTTTGCG 59.140 42.857 10.49 0.00 38.05 4.85
506 841 4.051922 GCTATTTACTGCTACGTCTGCAT 58.948 43.478 14.99 9.13 39.86 3.96
513 860 3.002348 GCCCAAAGCTATTTACTGCTACG 59.998 47.826 0.00 0.00 38.75 3.51
539 886 3.005539 GGAGCTGCAGGACCAGGA 61.006 66.667 17.12 0.00 33.44 3.86
646 1009 8.963725 AGTTAAGTTAGGTGGGCATTTATTTAC 58.036 33.333 0.00 0.00 0.00 2.01
648 1011 8.430573 AAGTTAAGTTAGGTGGGCATTTATTT 57.569 30.769 0.00 0.00 0.00 1.40
678 1049 0.755686 AGATGGAGCCGATGGAAGTC 59.244 55.000 0.00 0.00 0.00 3.01
732 1106 7.639945 ACCATTTTACGTTTTCTCTCTCTTTG 58.360 34.615 0.00 0.00 0.00 2.77
734 1108 7.217906 AGACCATTTTACGTTTTCTCTCTCTT 58.782 34.615 0.00 0.00 0.00 2.85
735 1109 6.760291 AGACCATTTTACGTTTTCTCTCTCT 58.240 36.000 0.00 0.00 0.00 3.10
736 1110 6.645415 TGAGACCATTTTACGTTTTCTCTCTC 59.355 38.462 0.00 0.00 31.25 3.20
737 1111 6.522054 TGAGACCATTTTACGTTTTCTCTCT 58.478 36.000 0.00 0.00 31.25 3.10
738 1112 6.424207 ACTGAGACCATTTTACGTTTTCTCTC 59.576 38.462 0.00 0.00 31.25 3.20
739 1113 6.289064 ACTGAGACCATTTTACGTTTTCTCT 58.711 36.000 0.00 0.00 31.25 3.10
740 1114 6.541111 ACTGAGACCATTTTACGTTTTCTC 57.459 37.500 0.00 0.00 0.00 2.87
741 1115 6.147328 GCTACTGAGACCATTTTACGTTTTCT 59.853 38.462 0.00 0.00 0.00 2.52
742 1116 6.073440 TGCTACTGAGACCATTTTACGTTTTC 60.073 38.462 0.00 0.00 0.00 2.29
743 1117 5.761234 TGCTACTGAGACCATTTTACGTTTT 59.239 36.000 0.00 0.00 0.00 2.43
748 1122 3.623510 GGCTGCTACTGAGACCATTTTAC 59.376 47.826 0.00 0.00 0.00 2.01
749 1123 3.263170 TGGCTGCTACTGAGACCATTTTA 59.737 43.478 0.00 0.00 0.00 1.52
763 1137 0.605083 CAGTGAGTGAGTGGCTGCTA 59.395 55.000 0.00 0.00 0.00 3.49
770 1144 0.665670 CCAGCGACAGTGAGTGAGTG 60.666 60.000 0.00 0.00 0.00 3.51
771 1145 1.109920 ACCAGCGACAGTGAGTGAGT 61.110 55.000 0.00 0.00 0.00 3.41
773 1147 1.472878 GATACCAGCGACAGTGAGTGA 59.527 52.381 0.00 0.00 0.00 3.41
774 1148 1.202348 TGATACCAGCGACAGTGAGTG 59.798 52.381 0.00 0.00 0.00 3.51
775 1149 1.202582 GTGATACCAGCGACAGTGAGT 59.797 52.381 0.00 0.00 0.00 3.41
797 1368 2.035632 CTAGGACCAAGCTAGGACCAG 58.964 57.143 4.45 0.00 44.55 4.00
798 1369 1.965318 GCTAGGACCAAGCTAGGACCA 60.965 57.143 4.45 0.00 44.55 4.02
799 1370 0.753867 GCTAGGACCAAGCTAGGACC 59.246 60.000 0.00 0.00 42.79 4.46
806 1377 1.971357 TGGCTATAGCTAGGACCAAGC 59.029 52.381 23.53 4.21 41.70 4.01
807 1378 3.951775 CTGGCTATAGCTAGGACCAAG 57.048 52.381 26.03 3.81 44.59 3.61
815 1386 0.959553 GGTGCGACTGGCTATAGCTA 59.040 55.000 23.53 17.35 44.05 3.32
816 1387 1.043116 TGGTGCGACTGGCTATAGCT 61.043 55.000 23.53 4.58 44.05 3.32
817 1388 0.179084 TTGGTGCGACTGGCTATAGC 60.179 55.000 16.78 16.78 44.05 2.97
818 1389 2.533266 ATTGGTGCGACTGGCTATAG 57.467 50.000 0.00 0.00 44.05 1.31
819 1390 2.093181 ACAATTGGTGCGACTGGCTATA 60.093 45.455 10.83 0.00 44.05 1.31
820 1391 1.340017 ACAATTGGTGCGACTGGCTAT 60.340 47.619 10.83 0.00 44.05 2.97
821 1392 0.036164 ACAATTGGTGCGACTGGCTA 59.964 50.000 10.83 0.00 44.05 3.93
822 1393 0.036164 TACAATTGGTGCGACTGGCT 59.964 50.000 10.83 0.00 44.05 4.75
823 1394 0.878416 TTACAATTGGTGCGACTGGC 59.122 50.000 10.83 0.00 43.96 4.85
824 1395 3.634568 TTTTACAATTGGTGCGACTGG 57.365 42.857 10.83 0.00 0.00 4.00
825 1396 4.355437 TGTTTTTACAATTGGTGCGACTG 58.645 39.130 10.83 0.00 0.00 3.51
826 1397 4.499019 CCTGTTTTTACAATTGGTGCGACT 60.499 41.667 10.83 0.00 0.00 4.18
827 1398 3.733727 CCTGTTTTTACAATTGGTGCGAC 59.266 43.478 10.83 3.75 0.00 5.19
828 1399 3.797184 GCCTGTTTTTACAATTGGTGCGA 60.797 43.478 10.83 0.00 0.00 5.10
829 1400 2.474735 GCCTGTTTTTACAATTGGTGCG 59.525 45.455 10.83 0.00 0.00 5.34
830 1401 3.494251 CAGCCTGTTTTTACAATTGGTGC 59.506 43.478 10.83 0.00 0.00 5.01
831 1402 4.057432 CCAGCCTGTTTTTACAATTGGTG 58.943 43.478 10.83 0.00 0.00 4.17
832 1403 3.709141 ACCAGCCTGTTTTTACAATTGGT 59.291 39.130 10.83 0.00 0.00 3.67
833 1404 4.057432 CACCAGCCTGTTTTTACAATTGG 58.943 43.478 10.83 0.00 0.00 3.16
834 1405 4.942852 TCACCAGCCTGTTTTTACAATTG 58.057 39.130 3.24 3.24 0.00 2.32
835 1406 5.600696 CTTCACCAGCCTGTTTTTACAATT 58.399 37.500 0.00 0.00 0.00 2.32
836 1407 4.501400 GCTTCACCAGCCTGTTTTTACAAT 60.501 41.667 0.00 0.00 43.65 2.71
837 1408 3.181480 GCTTCACCAGCCTGTTTTTACAA 60.181 43.478 0.00 0.00 43.65 2.41
838 1409 2.360801 GCTTCACCAGCCTGTTTTTACA 59.639 45.455 0.00 0.00 43.65 2.41
839 1410 3.013276 GCTTCACCAGCCTGTTTTTAC 57.987 47.619 0.00 0.00 43.65 2.01
879 1450 2.121291 TGTCTTGTTGCACTCCACAA 57.879 45.000 1.96 1.96 0.00 3.33
880 1451 1.742831 GTTGTCTTGTTGCACTCCACA 59.257 47.619 0.00 0.00 0.00 4.17
881 1452 1.065551 GGTTGTCTTGTTGCACTCCAC 59.934 52.381 0.00 0.00 0.00 4.02
882 1453 1.340502 TGGTTGTCTTGTTGCACTCCA 60.341 47.619 0.00 0.00 0.00 3.86
883 1454 1.065551 GTGGTTGTCTTGTTGCACTCC 59.934 52.381 0.00 0.00 0.00 3.85
885 1456 1.832883 TGTGGTTGTCTTGTTGCACT 58.167 45.000 0.00 0.00 0.00 4.40
886 1457 2.462889 CATGTGGTTGTCTTGTTGCAC 58.537 47.619 0.00 0.00 0.00 4.57
887 1458 1.202394 GCATGTGGTTGTCTTGTTGCA 60.202 47.619 0.00 0.00 0.00 4.08
888 1459 1.067516 AGCATGTGGTTGTCTTGTTGC 59.932 47.619 0.00 0.00 0.00 4.17
889 1460 4.771590 ATAGCATGTGGTTGTCTTGTTG 57.228 40.909 0.00 0.00 0.00 3.33
967 1549 3.226346 TGTCCGCTTGTGTGTATCTAC 57.774 47.619 0.00 0.00 0.00 2.59
1236 1821 0.881118 TGGAGAAAAGAATGCGCACC 59.119 50.000 14.90 8.08 0.00 5.01
1237 1822 2.421424 AGATGGAGAAAAGAATGCGCAC 59.579 45.455 14.90 0.00 0.00 5.34
1249 1834 4.062293 CGTAACCACAAACAGATGGAGAA 58.938 43.478 0.00 0.00 39.46 2.87
1271 1856 2.422276 AAACAAGCAAGCATTCCGTC 57.578 45.000 0.00 0.00 0.00 4.79
1272 1857 2.472816 CAAAACAAGCAAGCATTCCGT 58.527 42.857 0.00 0.00 0.00 4.69
1273 1858 1.192980 GCAAAACAAGCAAGCATTCCG 59.807 47.619 0.00 0.00 0.00 4.30
1274 1859 2.211806 TGCAAAACAAGCAAGCATTCC 58.788 42.857 0.00 0.00 39.39 3.01
1275 1860 3.125316 TCTGCAAAACAAGCAAGCATTC 58.875 40.909 0.00 0.00 42.17 2.67
1301 1894 2.535984 GCAGTCGATTAAGTCACCATCG 59.464 50.000 0.00 0.00 40.98 3.84
1310 1903 2.194271 GAGGGAACGCAGTCGATTAAG 58.806 52.381 0.00 0.00 45.00 1.85
1427 2020 1.933853 GCGAGAGAGAGAGAGAGACAC 59.066 57.143 0.00 0.00 0.00 3.67
1428 2021 1.470805 CGCGAGAGAGAGAGAGAGACA 60.471 57.143 0.00 0.00 0.00 3.41
1429 2022 1.209128 CGCGAGAGAGAGAGAGAGAC 58.791 60.000 0.00 0.00 0.00 3.36
1430 2023 0.821517 ACGCGAGAGAGAGAGAGAGA 59.178 55.000 15.93 0.00 33.96 3.10
1431 2024 0.930310 CACGCGAGAGAGAGAGAGAG 59.070 60.000 15.93 0.00 33.96 3.20
1432 2025 0.533032 TCACGCGAGAGAGAGAGAGA 59.467 55.000 15.93 0.00 33.96 3.10
1433 2026 3.058115 TCACGCGAGAGAGAGAGAG 57.942 57.895 15.93 0.00 33.96 3.20
1457 2050 3.539604 AGCATGGAACTAGCTTAGCAAG 58.460 45.455 7.07 0.00 35.87 4.01
1473 2066 4.809426 CGGGTCCTAGTTAAGTAAAGCATG 59.191 45.833 0.00 0.00 0.00 4.06
1480 2073 1.392589 CGGCGGGTCCTAGTTAAGTA 58.607 55.000 0.00 0.00 0.00 2.24
1616 2209 0.688418 AGCTGGCTCTGAGCAGATCT 60.688 55.000 28.95 16.97 44.75 2.75
1726 2319 1.107945 GAGGCCAGAGGAGACAGTAC 58.892 60.000 5.01 0.00 0.00 2.73
1730 2506 0.252881 AATGGAGGCCAGAGGAGACA 60.253 55.000 5.01 0.00 36.75 3.41
1824 2600 1.202758 AGTGCCAAACCATTCTGTCGA 60.203 47.619 0.00 0.00 0.00 4.20
1826 2602 2.863704 GCAAGTGCCAAACCATTCTGTC 60.864 50.000 0.00 0.00 34.31 3.51
1841 2617 8.692110 ATGACATATTAACATTGTTGCAAGTG 57.308 30.769 12.30 1.81 0.00 3.16
1892 2668 3.244630 ACCTACCACTGAAATAAACGGCA 60.245 43.478 0.00 0.00 0.00 5.69
1893 2669 3.340928 ACCTACCACTGAAATAAACGGC 58.659 45.455 0.00 0.00 0.00 5.68
1894 2670 4.828829 AGACCTACCACTGAAATAAACGG 58.171 43.478 0.00 0.00 0.00 4.44
1896 2672 8.788325 ATTGTAGACCTACCACTGAAATAAAC 57.212 34.615 4.88 0.00 35.26 2.01
1900 2677 6.779860 ACAATTGTAGACCTACCACTGAAAT 58.220 36.000 9.97 0.00 35.26 2.17
1918 2695 9.594038 GTGTACTGTACAATTTACAGACAATTG 57.406 33.333 21.23 3.24 45.69 2.32
1933 2710 5.163550 GCTGTCATCATAGGTGTACTGTACA 60.164 44.000 16.26 16.26 36.08 2.90
1969 2746 2.891191 TCCCTTTTCCTTGGCGTAAT 57.109 45.000 0.00 0.00 0.00 1.89
2006 2783 0.889994 TGGTTTGCTCACATGATGCC 59.110 50.000 0.00 0.00 0.00 4.40
2032 2809 8.500753 TTCTTTTTACAGAGCAAACTACAGAA 57.499 30.769 0.00 0.00 0.00 3.02
2072 2849 0.609131 CCACAAGCCCCAACACTAGG 60.609 60.000 0.00 0.00 0.00 3.02
2074 2851 1.228429 GCCACAAGCCCCAACACTA 60.228 57.895 0.00 0.00 34.35 2.74
2125 2902 5.985530 GCTGTTTTTATGCTTTTCCTGAGTT 59.014 36.000 0.00 0.00 0.00 3.01
2143 2920 9.730420 CAAGTAGTAACTGTTTAATTGCTGTTT 57.270 29.630 0.00 0.00 35.62 2.83
2144 2921 7.860872 GCAAGTAGTAACTGTTTAATTGCTGTT 59.139 33.333 21.03 0.00 35.62 3.16
2271 3048 5.066505 AGTCGCCAATGGATCTAAACAAATC 59.933 40.000 2.05 0.00 0.00 2.17
2292 3069 1.203994 TCTAAACTGGCCGCACTAGTC 59.796 52.381 0.00 0.00 39.56 2.59
2317 3094 2.350484 CGAGTCGTGTAGTCAAGCAGAA 60.350 50.000 3.82 0.00 0.00 3.02
2432 3209 6.891908 AGGACATGTCTTGGCAAATAAACTAT 59.108 34.615 24.50 0.00 33.62 2.12
2533 3310 7.664731 TCATAACCCTACGTTTGAACCAAATTA 59.335 33.333 0.00 0.00 35.74 1.40
2558 3335 8.131731 GGAATCATTTGGCTTATCTGTTTAGTC 58.868 37.037 0.00 0.00 0.00 2.59
2918 4024 7.760131 AACACAATGCACTTGATATTTATGC 57.240 32.000 13.53 0.00 38.29 3.14
2936 4042 7.094377 GGAGATTAAGCTCATTGGTAAACACAA 60.094 37.037 21.47 0.00 36.62 3.33
3104 4221 7.964604 AGTTACTCTAATGGTTGAGTCAAAC 57.035 36.000 14.26 14.26 41.92 2.93
3136 4253 5.985530 TCGAATGCAGTGGATATAAGACAAG 59.014 40.000 0.00 0.00 0.00 3.16
3176 4293 3.995809 TAGGGGAAGGGGAGTGGCG 62.996 68.421 0.00 0.00 0.00 5.69
3272 4417 9.717942 GAGCAGTAGACTCCAATCATTATTATT 57.282 33.333 0.00 0.00 0.00 1.40
3273 4418 9.099071 AGAGCAGTAGACTCCAATCATTATTAT 57.901 33.333 0.00 0.00 34.56 1.28
3275 4420 7.372260 AGAGCAGTAGACTCCAATCATTATT 57.628 36.000 0.00 0.00 34.56 1.40
3276 4421 6.992664 AGAGCAGTAGACTCCAATCATTAT 57.007 37.500 0.00 0.00 34.56 1.28
3277 4422 6.798427 AAGAGCAGTAGACTCCAATCATTA 57.202 37.500 0.00 0.00 34.56 1.90
3278 4423 5.690464 AAGAGCAGTAGACTCCAATCATT 57.310 39.130 0.00 0.00 34.56 2.57
3279 4424 6.155221 TGTTAAGAGCAGTAGACTCCAATCAT 59.845 38.462 0.00 0.00 34.56 2.45
3280 4425 5.480422 TGTTAAGAGCAGTAGACTCCAATCA 59.520 40.000 0.00 0.00 34.56 2.57
3281 4426 5.967088 TGTTAAGAGCAGTAGACTCCAATC 58.033 41.667 0.00 0.00 34.56 2.67
3282 4427 6.552445 ATGTTAAGAGCAGTAGACTCCAAT 57.448 37.500 0.00 0.00 34.56 3.16
3341 4730 7.282585 CCCCATAGTATTTCTCTGAATTCACA 58.717 38.462 3.38 0.00 0.00 3.58
3461 4850 2.306805 AGCCTCAATGGTGTTGAGATCA 59.693 45.455 16.93 0.00 46.57 2.92
3671 5074 1.215423 AGACCAGGCAAAAGGTGAACT 59.785 47.619 0.00 0.00 38.50 3.01
3949 5395 4.060205 CAGACCGTTCATCATCATGCATA 58.940 43.478 0.00 0.00 0.00 3.14
3953 5399 2.910199 ACCAGACCGTTCATCATCATG 58.090 47.619 0.00 0.00 0.00 3.07
3954 5400 3.706594 AGTACCAGACCGTTCATCATCAT 59.293 43.478 0.00 0.00 0.00 2.45
3955 5401 3.096852 AGTACCAGACCGTTCATCATCA 58.903 45.455 0.00 0.00 0.00 3.07
3956 5402 3.130516 TGAGTACCAGACCGTTCATCATC 59.869 47.826 0.00 0.00 0.00 2.92
3957 5403 3.096852 TGAGTACCAGACCGTTCATCAT 58.903 45.455 0.00 0.00 0.00 2.45
3958 5404 2.492088 CTGAGTACCAGACCGTTCATCA 59.508 50.000 5.67 0.00 45.78 3.07
3959 5405 2.159226 CCTGAGTACCAGACCGTTCATC 60.159 54.545 11.58 0.00 45.78 2.92
3965 5411 1.033574 GGATCCTGAGTACCAGACCG 58.966 60.000 3.84 0.00 45.78 4.79
3974 5420 1.599047 CGTGCTTGGGATCCTGAGT 59.401 57.895 12.58 0.00 0.00 3.41
4358 5819 4.501400 GCAAAAGCCTAACAATGTCAGGTT 60.501 41.667 4.24 0.00 0.00 3.50
4359 5820 3.005791 GCAAAAGCCTAACAATGTCAGGT 59.994 43.478 4.24 0.00 0.00 4.00
4500 5970 0.387202 CCACCCTCGAGTGCTCATAG 59.613 60.000 12.31 0.00 36.38 2.23
4518 5988 7.687941 TGTCAAAATTTACAGATTCCTCTCC 57.312 36.000 0.00 0.00 0.00 3.71
4597 6067 3.955650 AACACTGAAGCGGTACAGTAT 57.044 42.857 0.00 0.00 44.07 2.12
4621 6093 4.025396 CAGGATGAAATGCGATATATCCGC 60.025 45.833 17.27 17.27 46.62 5.54
4623 6095 6.108687 TCACAGGATGAAATGCGATATATCC 58.891 40.000 7.15 0.00 40.91 2.59
4628 6100 6.345096 TCTATCACAGGATGAAATGCGATA 57.655 37.500 0.00 0.00 41.93 2.92
4642 6115 5.761003 CACAGCTACTGAGATCTATCACAG 58.239 45.833 13.69 13.69 46.52 3.66
4643 6116 4.037327 GCACAGCTACTGAGATCTATCACA 59.963 45.833 0.00 0.00 35.18 3.58
4644 6117 4.037327 TGCACAGCTACTGAGATCTATCAC 59.963 45.833 0.00 0.00 35.18 3.06
4646 6119 4.844998 TGCACAGCTACTGAGATCTATC 57.155 45.455 0.00 0.00 35.18 2.08
4647 6120 4.021280 CCATGCACAGCTACTGAGATCTAT 60.021 45.833 0.00 0.00 35.18 1.98
4648 6121 3.320256 CCATGCACAGCTACTGAGATCTA 59.680 47.826 0.00 0.00 35.18 1.98
4649 6122 2.102757 CCATGCACAGCTACTGAGATCT 59.897 50.000 0.00 0.00 35.18 2.75
4650 6123 2.102084 TCCATGCACAGCTACTGAGATC 59.898 50.000 0.78 0.00 35.18 2.75
4651 6124 2.113807 TCCATGCACAGCTACTGAGAT 58.886 47.619 0.78 0.00 35.18 2.75
4653 6126 2.391616 TTCCATGCACAGCTACTGAG 57.608 50.000 0.78 0.00 35.18 3.35
4656 6129 2.867109 ACTTTCCATGCACAGCTACT 57.133 45.000 0.00 0.00 0.00 2.57
4657 6130 3.181506 GCTAACTTTCCATGCACAGCTAC 60.182 47.826 0.00 0.00 0.00 3.58
4660 6133 1.815003 AGCTAACTTTCCATGCACAGC 59.185 47.619 0.00 0.00 0.00 4.40
4661 6134 3.076621 TCAGCTAACTTTCCATGCACAG 58.923 45.455 0.00 0.00 0.00 3.66
4663 6136 4.878397 AGTATCAGCTAACTTTCCATGCAC 59.122 41.667 0.00 0.00 0.00 4.57
4665 6138 4.260948 GCAGTATCAGCTAACTTTCCATGC 60.261 45.833 0.00 0.00 0.00 4.06
4667 6140 5.102953 TGCAGTATCAGCTAACTTTCCAT 57.897 39.130 0.00 0.00 0.00 3.41
4669 6142 4.260948 GCATGCAGTATCAGCTAACTTTCC 60.261 45.833 14.21 0.00 0.00 3.13
4670 6143 4.551603 CGCATGCAGTATCAGCTAACTTTC 60.552 45.833 19.57 0.00 0.00 2.62
4671 6144 3.310774 CGCATGCAGTATCAGCTAACTTT 59.689 43.478 19.57 0.00 0.00 2.66
4673 6146 2.477825 CGCATGCAGTATCAGCTAACT 58.522 47.619 19.57 0.00 0.00 2.24
4674 6147 1.528586 CCGCATGCAGTATCAGCTAAC 59.471 52.381 19.57 0.00 0.00 2.34
4675 6148 1.138859 ACCGCATGCAGTATCAGCTAA 59.861 47.619 19.57 0.00 0.00 3.09
4676 6149 0.752658 ACCGCATGCAGTATCAGCTA 59.247 50.000 19.57 0.00 0.00 3.32
4677 6150 0.107508 AACCGCATGCAGTATCAGCT 60.108 50.000 19.57 0.00 0.00 4.24
4678 6151 0.028505 CAACCGCATGCAGTATCAGC 59.971 55.000 19.57 0.00 0.00 4.26
4679 6152 1.372582 ACAACCGCATGCAGTATCAG 58.627 50.000 19.57 6.36 0.00 2.90
4680 6153 1.468127 CAACAACCGCATGCAGTATCA 59.532 47.619 19.57 0.00 0.00 2.15
4681 6154 1.468520 ACAACAACCGCATGCAGTATC 59.531 47.619 19.57 0.00 0.00 2.24
4683 6156 1.001924 CAACAACAACCGCATGCAGTA 60.002 47.619 19.57 0.00 0.00 2.74
4685 6158 0.940519 CCAACAACAACCGCATGCAG 60.941 55.000 19.57 9.32 0.00 4.41
4686 6159 1.067084 CCAACAACAACCGCATGCA 59.933 52.632 19.57 0.00 0.00 3.96
4687 6160 0.249238 TTCCAACAACAACCGCATGC 60.249 50.000 7.91 7.91 0.00 4.06
4688 6161 2.215907 TTTCCAACAACAACCGCATG 57.784 45.000 0.00 0.00 0.00 4.06
4689 6162 4.799564 ATATTTCCAACAACAACCGCAT 57.200 36.364 0.00 0.00 0.00 4.73
4690 6163 4.592485 AATATTTCCAACAACAACCGCA 57.408 36.364 0.00 0.00 0.00 5.69
4692 6165 5.704888 TGCTAATATTTCCAACAACAACCG 58.295 37.500 0.00 0.00 0.00 4.44
4693 6166 9.816354 AATATGCTAATATTTCCAACAACAACC 57.184 29.630 0.00 0.00 35.81 3.77
4755 6473 8.630037 TCGATATGAGATGCATACCGTATTTAT 58.370 33.333 0.00 0.00 45.00 1.40
4834 6552 8.527810 TCGTTTATGTGCTGACCATATATATGA 58.472 33.333 21.97 3.72 35.75 2.15
4846 6564 2.766313 ACTTGCTCGTTTATGTGCTGA 58.234 42.857 0.00 0.00 0.00 4.26
4865 6583 3.005578 GGTATGACTCGTTCATCCCCTAC 59.994 52.174 5.69 0.16 41.53 3.18
4892 6610 2.105930 GCGTTTGCTTGGCCAACA 59.894 55.556 16.05 15.01 34.48 3.33
4943 6678 2.230508 TGGTTGACGACGAGCTAAGAAT 59.769 45.455 0.00 0.00 0.00 2.40
4949 6684 1.079819 CCATGGTTGACGACGAGCT 60.080 57.895 2.57 0.00 0.00 4.09
4972 7950 3.750922 GCTTCCACTACTTCCCCTGTTTT 60.751 47.826 0.00 0.00 0.00 2.43
4974 7952 1.351350 GCTTCCACTACTTCCCCTGTT 59.649 52.381 0.00 0.00 0.00 3.16
4975 7953 0.984995 GCTTCCACTACTTCCCCTGT 59.015 55.000 0.00 0.00 0.00 4.00
5018 8002 4.684265 GTCTCGACGCGATTGCTA 57.316 55.556 15.93 0.00 39.65 3.49
5058 8043 5.363868 TCGTTTAAGATCATGTCTGGGAGAT 59.636 40.000 0.00 0.00 37.23 2.75
5065 8050 6.274157 ACTCTGTCGTTTAAGATCATGTCT 57.726 37.500 0.00 0.00 39.43 3.41
5067 8052 5.869888 GGAACTCTGTCGTTTAAGATCATGT 59.130 40.000 0.00 0.00 0.00 3.21
5070 8055 5.243060 TCTGGAACTCTGTCGTTTAAGATCA 59.757 40.000 0.00 0.00 0.00 2.92
5086 8071 0.036022 GAGCAAGTGCCTCTGGAACT 59.964 55.000 0.00 0.00 43.38 3.01
5109 8094 2.334653 CGCGTGCATGGTTGGTTT 59.665 55.556 8.27 0.00 0.00 3.27
5135 8121 1.152631 TGCTCCCGACGATCCCATA 60.153 57.895 0.00 0.00 0.00 2.74
5149 8135 5.869753 TTATTTTTCTCTCTGTGCTGCTC 57.130 39.130 0.00 0.00 0.00 4.26
5165 8151 6.435292 ACCCTAGCCGTCATCTATTATTTT 57.565 37.500 0.00 0.00 0.00 1.82
5166 8152 6.183361 ACAACCCTAGCCGTCATCTATTATTT 60.183 38.462 0.00 0.00 0.00 1.40
5196 8182 2.683768 ACTCAGTTCACTCACTCCCTT 58.316 47.619 0.00 0.00 0.00 3.95
5305 8294 0.247736 GTAGTGCCACAGTCCAGGAG 59.752 60.000 0.00 0.00 0.00 3.69
5314 8303 3.386726 AGAGTTGTTACAGTAGTGCCACA 59.613 43.478 0.00 0.00 0.00 4.17
5315 8304 3.991367 AGAGTTGTTACAGTAGTGCCAC 58.009 45.455 0.00 0.00 0.00 5.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.