Multiple sequence alignment - TraesCS7D01G232500
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G232500 | chr7D | 100.000 | 3764 | 0 | 0 | 1 | 3764 | 193934005 | 193937768 | 0.000000e+00 | 6951.0 |
1 | TraesCS7D01G232500 | chr7D | 87.450 | 1761 | 219 | 2 | 987 | 2745 | 84422200 | 84420440 | 0.000000e+00 | 2026.0 |
2 | TraesCS7D01G232500 | chr7D | 82.641 | 1757 | 280 | 16 | 998 | 2745 | 531977471 | 531975731 | 0.000000e+00 | 1531.0 |
3 | TraesCS7D01G232500 | chr7D | 89.174 | 545 | 37 | 8 | 248 | 771 | 100991635 | 100992178 | 0.000000e+00 | 660.0 |
4 | TraesCS7D01G232500 | chr7D | 95.604 | 91 | 3 | 1 | 682 | 771 | 575750439 | 575750349 | 1.090000e-30 | 145.0 |
5 | TraesCS7D01G232500 | chr7B | 97.165 | 1975 | 56 | 0 | 831 | 2805 | 157687607 | 157689581 | 0.000000e+00 | 3338.0 |
6 | TraesCS7D01G232500 | chr7B | 87.808 | 1747 | 213 | 0 | 999 | 2745 | 34168240 | 34169986 | 0.000000e+00 | 2047.0 |
7 | TraesCS7D01G232500 | chr7B | 82.791 | 1691 | 270 | 15 | 1058 | 2745 | 572507604 | 572505932 | 0.000000e+00 | 1491.0 |
8 | TraesCS7D01G232500 | chr7B | 89.560 | 546 | 34 | 9 | 248 | 771 | 622606652 | 622607196 | 0.000000e+00 | 671.0 |
9 | TraesCS7D01G232500 | chr7B | 80.258 | 542 | 48 | 29 | 281 | 771 | 667199253 | 667198720 | 1.660000e-93 | 353.0 |
10 | TraesCS7D01G232500 | chr7B | 95.556 | 90 | 4 | 0 | 682 | 771 | 286843974 | 286844063 | 1.090000e-30 | 145.0 |
11 | TraesCS7D01G232500 | chr7A | 97.124 | 1982 | 48 | 2 | 833 | 2805 | 203525336 | 203527317 | 0.000000e+00 | 3336.0 |
12 | TraesCS7D01G232500 | chr7A | 87.429 | 1766 | 213 | 5 | 987 | 2744 | 85724209 | 85725973 | 0.000000e+00 | 2023.0 |
13 | TraesCS7D01G232500 | chr7A | 93.593 | 437 | 26 | 2 | 247 | 682 | 2975668 | 2976103 | 0.000000e+00 | 651.0 |
14 | TraesCS7D01G232500 | chr7A | 86.319 | 307 | 25 | 6 | 247 | 552 | 24676145 | 24675855 | 6.070000e-83 | 318.0 |
15 | TraesCS7D01G232500 | chr7A | 97.500 | 40 | 1 | 0 | 209 | 248 | 2975646 | 2975685 | 6.750000e-08 | 69.4 |
16 | TraesCS7D01G232500 | chrUn | 87.429 | 1766 | 213 | 5 | 987 | 2744 | 82637427 | 82635663 | 0.000000e+00 | 2023.0 |
17 | TraesCS7D01G232500 | chrUn | 100.000 | 37 | 0 | 0 | 798 | 834 | 39248545 | 39248509 | 6.750000e-08 | 69.4 |
18 | TraesCS7D01G232500 | chrUn | 100.000 | 37 | 0 | 0 | 798 | 834 | 42085605 | 42085569 | 6.750000e-08 | 69.4 |
19 | TraesCS7D01G232500 | chrUn | 100.000 | 37 | 0 | 0 | 798 | 834 | 70414288 | 70414252 | 6.750000e-08 | 69.4 |
20 | TraesCS7D01G232500 | chrUn | 100.000 | 37 | 0 | 0 | 798 | 834 | 118926586 | 118926622 | 6.750000e-08 | 69.4 |
21 | TraesCS7D01G232500 | chrUn | 100.000 | 37 | 0 | 0 | 798 | 834 | 371910029 | 371909993 | 6.750000e-08 | 69.4 |
22 | TraesCS7D01G232500 | chr1A | 83.918 | 1710 | 245 | 18 | 1059 | 2746 | 99318675 | 99320376 | 0.000000e+00 | 1607.0 |
23 | TraesCS7D01G232500 | chr1D | 99.074 | 648 | 5 | 1 | 2846 | 3493 | 258912713 | 258912067 | 0.000000e+00 | 1162.0 |
24 | TraesCS7D01G232500 | chr1D | 92.780 | 651 | 40 | 6 | 2846 | 3493 | 385608429 | 385609075 | 0.000000e+00 | 935.0 |
25 | TraesCS7D01G232500 | chr1D | 89.174 | 545 | 38 | 10 | 247 | 771 | 327751341 | 327750798 | 0.000000e+00 | 660.0 |
26 | TraesCS7D01G232500 | chr1D | 86.396 | 566 | 35 | 13 | 247 | 771 | 285610657 | 285611221 | 7.010000e-162 | 580.0 |
27 | TraesCS7D01G232500 | chr1D | 85.529 | 539 | 32 | 11 | 256 | 771 | 458763507 | 458764022 | 4.310000e-144 | 521.0 |
28 | TraesCS7D01G232500 | chr1D | 99.635 | 274 | 1 | 0 | 3491 | 3764 | 258906605 | 258906332 | 5.610000e-138 | 501.0 |
29 | TraesCS7D01G232500 | chr1D | 97.810 | 274 | 6 | 0 | 3491 | 3764 | 239630510 | 239630783 | 1.220000e-129 | 473.0 |
30 | TraesCS7D01G232500 | chr1D | 100.000 | 30 | 0 | 0 | 207 | 236 | 61000875 | 61000846 | 5.250000e-04 | 56.5 |
31 | TraesCS7D01G232500 | chr4D | 98.611 | 648 | 8 | 1 | 2846 | 3493 | 283083135 | 283082489 | 0.000000e+00 | 1146.0 |
32 | TraesCS7D01G232500 | chr4D | 99.270 | 274 | 2 | 0 | 3491 | 3764 | 283077026 | 283076753 | 2.610000e-136 | 496.0 |
33 | TraesCS7D01G232500 | chr4D | 88.164 | 414 | 41 | 6 | 273 | 684 | 397119667 | 397120074 | 1.570000e-133 | 486.0 |
34 | TraesCS7D01G232500 | chr4D | 100.000 | 28 | 0 | 0 | 209 | 236 | 3930242 | 3930215 | 7.000000e-03 | 52.8 |
35 | TraesCS7D01G232500 | chr5D | 98.613 | 649 | 3 | 3 | 2845 | 3493 | 451604790 | 451605432 | 0.000000e+00 | 1144.0 |
36 | TraesCS7D01G232500 | chr5D | 98.302 | 648 | 5 | 3 | 2846 | 3493 | 451611988 | 451611347 | 0.000000e+00 | 1131.0 |
37 | TraesCS7D01G232500 | chr5D | 90.110 | 546 | 30 | 10 | 247 | 769 | 106691406 | 106690862 | 0.000000e+00 | 688.0 |
38 | TraesCS7D01G232500 | chr5D | 88.525 | 549 | 37 | 11 | 247 | 771 | 448736514 | 448735968 | 3.170000e-180 | 641.0 |
39 | TraesCS7D01G232500 | chr5D | 86.635 | 419 | 25 | 14 | 269 | 684 | 5692106 | 5691716 | 5.770000e-118 | 435.0 |
40 | TraesCS7D01G232500 | chr5D | 100.000 | 32 | 0 | 0 | 217 | 248 | 106691420 | 106691389 | 4.060000e-05 | 60.2 |
41 | TraesCS7D01G232500 | chr3B | 98.148 | 648 | 11 | 1 | 2846 | 3493 | 268966775 | 268966129 | 0.000000e+00 | 1129.0 |
42 | TraesCS7D01G232500 | chr3B | 92.906 | 437 | 30 | 1 | 249 | 684 | 229509110 | 229508674 | 5.300000e-178 | 634.0 |
43 | TraesCS7D01G232500 | chr3B | 92.220 | 437 | 30 | 4 | 250 | 684 | 69430399 | 69429965 | 1.920000e-172 | 616.0 |
44 | TraesCS7D01G232500 | chr3B | 95.556 | 90 | 4 | 0 | 682 | 771 | 703114151 | 703114240 | 1.090000e-30 | 145.0 |
45 | TraesCS7D01G232500 | chr3B | 100.000 | 38 | 0 | 0 | 798 | 835 | 799457511 | 799457548 | 1.880000e-08 | 71.3 |
46 | TraesCS7D01G232500 | chr2D | 97.222 | 648 | 14 | 4 | 2846 | 3493 | 460753505 | 460752862 | 0.000000e+00 | 1094.0 |
47 | TraesCS7D01G232500 | chr2D | 90.239 | 543 | 34 | 10 | 247 | 771 | 555160485 | 555161026 | 0.000000e+00 | 691.0 |
48 | TraesCS7D01G232500 | chr2D | 87.472 | 439 | 27 | 3 | 247 | 684 | 18351732 | 18351321 | 7.310000e-132 | 481.0 |
49 | TraesCS7D01G232500 | chr2D | 97.445 | 274 | 7 | 0 | 3491 | 3764 | 460734363 | 460734090 | 5.690000e-128 | 468.0 |
50 | TraesCS7D01G232500 | chr1B | 96.148 | 649 | 22 | 3 | 2846 | 3493 | 299259336 | 299259982 | 0.000000e+00 | 1057.0 |
51 | TraesCS7D01G232500 | chr1B | 89.706 | 544 | 35 | 7 | 248 | 771 | 624822348 | 624822890 | 0.000000e+00 | 675.0 |
52 | TraesCS7D01G232500 | chr1B | 95.604 | 91 | 3 | 1 | 682 | 771 | 322417919 | 322417829 | 1.090000e-30 | 145.0 |
53 | TraesCS7D01G232500 | chr1B | 85.185 | 54 | 7 | 1 | 191 | 243 | 402040148 | 402040201 | 2.000000e-03 | 54.7 |
54 | TraesCS7D01G232500 | chr5B | 95.679 | 648 | 27 | 1 | 2846 | 3493 | 46636607 | 46637253 | 0.000000e+00 | 1040.0 |
55 | TraesCS7D01G232500 | chr5B | 96.715 | 274 | 9 | 0 | 3491 | 3764 | 46665953 | 46666226 | 1.230000e-124 | 457.0 |
56 | TraesCS7D01G232500 | chr3A | 91.392 | 546 | 26 | 7 | 247 | 771 | 433997265 | 433996720 | 0.000000e+00 | 728.0 |
57 | TraesCS7D01G232500 | chr3A | 94.834 | 271 | 13 | 1 | 3491 | 3761 | 708546919 | 708547188 | 4.500000e-114 | 422.0 |
58 | TraesCS7D01G232500 | chr3A | 97.436 | 39 | 1 | 0 | 210 | 248 | 433997286 | 433997248 | 2.430000e-07 | 67.6 |
59 | TraesCS7D01G232500 | chr3D | 89.358 | 545 | 37 | 7 | 247 | 771 | 551071278 | 551070735 | 0.000000e+00 | 665.0 |
60 | TraesCS7D01G232500 | chr3D | 88.462 | 546 | 39 | 7 | 247 | 771 | 228165258 | 228165800 | 4.100000e-179 | 638.0 |
61 | TraesCS7D01G232500 | chr3D | 86.239 | 545 | 51 | 8 | 247 | 771 | 614916062 | 614916602 | 1.520000e-158 | 569.0 |
62 | TraesCS7D01G232500 | chr3D | 95.556 | 90 | 4 | 0 | 682 | 771 | 286764161 | 286764072 | 1.090000e-30 | 145.0 |
63 | TraesCS7D01G232500 | chr3D | 100.000 | 30 | 0 | 0 | 217 | 246 | 228165244 | 228165273 | 5.250000e-04 | 56.5 |
64 | TraesCS7D01G232500 | chr6D | 89.114 | 542 | 35 | 10 | 247 | 768 | 464400811 | 464401348 | 0.000000e+00 | 652.0 |
65 | TraesCS7D01G232500 | chr6D | 93.313 | 329 | 20 | 2 | 270 | 597 | 306028920 | 306028593 | 5.650000e-133 | 484.0 |
66 | TraesCS7D01G232500 | chr6D | 84.411 | 526 | 36 | 11 | 247 | 771 | 49188904 | 49189384 | 3.400000e-130 | 475.0 |
67 | TraesCS7D01G232500 | chr6D | 100.000 | 37 | 0 | 0 | 798 | 834 | 81136622 | 81136658 | 6.750000e-08 | 69.4 |
68 | TraesCS7D01G232500 | chr6D | 100.000 | 37 | 0 | 0 | 798 | 834 | 86131199 | 86131235 | 6.750000e-08 | 69.4 |
69 | TraesCS7D01G232500 | chr6D | 100.000 | 37 | 0 | 0 | 798 | 834 | 86664107 | 86664071 | 6.750000e-08 | 69.4 |
70 | TraesCS7D01G232500 | chr6D | 96.875 | 32 | 1 | 0 | 205 | 236 | 34430070 | 34430039 | 2.000000e-03 | 54.7 |
71 | TraesCS7D01G232500 | chr4A | 95.307 | 277 | 10 | 2 | 3491 | 3764 | 648468522 | 648468246 | 1.610000e-118 | 436.0 |
72 | TraesCS7D01G232500 | chr4A | 94.465 | 271 | 14 | 1 | 3491 | 3761 | 12666814 | 12667083 | 2.090000e-112 | 416.0 |
73 | TraesCS7D01G232500 | chr6B | 94.604 | 278 | 11 | 2 | 3491 | 3764 | 256233765 | 256233488 | 9.660000e-116 | 427.0 |
74 | TraesCS7D01G232500 | chr4B | 85.928 | 334 | 38 | 8 | 264 | 594 | 575726001 | 575725674 | 7.740000e-92 | 348.0 |
75 | TraesCS7D01G232500 | chr6A | 90.749 | 227 | 19 | 2 | 263 | 488 | 221296940 | 221297165 | 6.110000e-78 | 302.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G232500 | chr7D | 193934005 | 193937768 | 3763 | False | 6951.00 | 6951 | 100.000 | 1 | 3764 | 1 | chr7D.!!$F2 | 3763 |
1 | TraesCS7D01G232500 | chr7D | 84420440 | 84422200 | 1760 | True | 2026.00 | 2026 | 87.450 | 987 | 2745 | 1 | chr7D.!!$R1 | 1758 |
2 | TraesCS7D01G232500 | chr7D | 531975731 | 531977471 | 1740 | True | 1531.00 | 1531 | 82.641 | 998 | 2745 | 1 | chr7D.!!$R2 | 1747 |
3 | TraesCS7D01G232500 | chr7D | 100991635 | 100992178 | 543 | False | 660.00 | 660 | 89.174 | 248 | 771 | 1 | chr7D.!!$F1 | 523 |
4 | TraesCS7D01G232500 | chr7B | 157687607 | 157689581 | 1974 | False | 3338.00 | 3338 | 97.165 | 831 | 2805 | 1 | chr7B.!!$F2 | 1974 |
5 | TraesCS7D01G232500 | chr7B | 34168240 | 34169986 | 1746 | False | 2047.00 | 2047 | 87.808 | 999 | 2745 | 1 | chr7B.!!$F1 | 1746 |
6 | TraesCS7D01G232500 | chr7B | 572505932 | 572507604 | 1672 | True | 1491.00 | 1491 | 82.791 | 1058 | 2745 | 1 | chr7B.!!$R1 | 1687 |
7 | TraesCS7D01G232500 | chr7B | 622606652 | 622607196 | 544 | False | 671.00 | 671 | 89.560 | 248 | 771 | 1 | chr7B.!!$F4 | 523 |
8 | TraesCS7D01G232500 | chr7B | 667198720 | 667199253 | 533 | True | 353.00 | 353 | 80.258 | 281 | 771 | 1 | chr7B.!!$R2 | 490 |
9 | TraesCS7D01G232500 | chr7A | 203525336 | 203527317 | 1981 | False | 3336.00 | 3336 | 97.124 | 833 | 2805 | 1 | chr7A.!!$F2 | 1972 |
10 | TraesCS7D01G232500 | chr7A | 85724209 | 85725973 | 1764 | False | 2023.00 | 2023 | 87.429 | 987 | 2744 | 1 | chr7A.!!$F1 | 1757 |
11 | TraesCS7D01G232500 | chrUn | 82635663 | 82637427 | 1764 | True | 2023.00 | 2023 | 87.429 | 987 | 2744 | 1 | chrUn.!!$R4 | 1757 |
12 | TraesCS7D01G232500 | chr1A | 99318675 | 99320376 | 1701 | False | 1607.00 | 1607 | 83.918 | 1059 | 2746 | 1 | chr1A.!!$F1 | 1687 |
13 | TraesCS7D01G232500 | chr1D | 258912067 | 258912713 | 646 | True | 1162.00 | 1162 | 99.074 | 2846 | 3493 | 1 | chr1D.!!$R3 | 647 |
14 | TraesCS7D01G232500 | chr1D | 385608429 | 385609075 | 646 | False | 935.00 | 935 | 92.780 | 2846 | 3493 | 1 | chr1D.!!$F3 | 647 |
15 | TraesCS7D01G232500 | chr1D | 327750798 | 327751341 | 543 | True | 660.00 | 660 | 89.174 | 247 | 771 | 1 | chr1D.!!$R4 | 524 |
16 | TraesCS7D01G232500 | chr1D | 285610657 | 285611221 | 564 | False | 580.00 | 580 | 86.396 | 247 | 771 | 1 | chr1D.!!$F2 | 524 |
17 | TraesCS7D01G232500 | chr1D | 458763507 | 458764022 | 515 | False | 521.00 | 521 | 85.529 | 256 | 771 | 1 | chr1D.!!$F4 | 515 |
18 | TraesCS7D01G232500 | chr4D | 283082489 | 283083135 | 646 | True | 1146.00 | 1146 | 98.611 | 2846 | 3493 | 1 | chr4D.!!$R3 | 647 |
19 | TraesCS7D01G232500 | chr5D | 451604790 | 451605432 | 642 | False | 1144.00 | 1144 | 98.613 | 2845 | 3493 | 1 | chr5D.!!$F1 | 648 |
20 | TraesCS7D01G232500 | chr5D | 451611347 | 451611988 | 641 | True | 1131.00 | 1131 | 98.302 | 2846 | 3493 | 1 | chr5D.!!$R3 | 647 |
21 | TraesCS7D01G232500 | chr5D | 448735968 | 448736514 | 546 | True | 641.00 | 641 | 88.525 | 247 | 771 | 1 | chr5D.!!$R2 | 524 |
22 | TraesCS7D01G232500 | chr5D | 106690862 | 106691420 | 558 | True | 374.10 | 688 | 95.055 | 217 | 769 | 2 | chr5D.!!$R4 | 552 |
23 | TraesCS7D01G232500 | chr3B | 268966129 | 268966775 | 646 | True | 1129.00 | 1129 | 98.148 | 2846 | 3493 | 1 | chr3B.!!$R3 | 647 |
24 | TraesCS7D01G232500 | chr2D | 460752862 | 460753505 | 643 | True | 1094.00 | 1094 | 97.222 | 2846 | 3493 | 1 | chr2D.!!$R3 | 647 |
25 | TraesCS7D01G232500 | chr2D | 555160485 | 555161026 | 541 | False | 691.00 | 691 | 90.239 | 247 | 771 | 1 | chr2D.!!$F1 | 524 |
26 | TraesCS7D01G232500 | chr1B | 299259336 | 299259982 | 646 | False | 1057.00 | 1057 | 96.148 | 2846 | 3493 | 1 | chr1B.!!$F1 | 647 |
27 | TraesCS7D01G232500 | chr1B | 624822348 | 624822890 | 542 | False | 675.00 | 675 | 89.706 | 248 | 771 | 1 | chr1B.!!$F3 | 523 |
28 | TraesCS7D01G232500 | chr5B | 46636607 | 46637253 | 646 | False | 1040.00 | 1040 | 95.679 | 2846 | 3493 | 1 | chr5B.!!$F1 | 647 |
29 | TraesCS7D01G232500 | chr3A | 433996720 | 433997286 | 566 | True | 397.80 | 728 | 94.414 | 210 | 771 | 2 | chr3A.!!$R1 | 561 |
30 | TraesCS7D01G232500 | chr3D | 551070735 | 551071278 | 543 | True | 665.00 | 665 | 89.358 | 247 | 771 | 1 | chr3D.!!$R2 | 524 |
31 | TraesCS7D01G232500 | chr3D | 614916062 | 614916602 | 540 | False | 569.00 | 569 | 86.239 | 247 | 771 | 1 | chr3D.!!$F1 | 524 |
32 | TraesCS7D01G232500 | chr3D | 228165244 | 228165800 | 556 | False | 347.25 | 638 | 94.231 | 217 | 771 | 2 | chr3D.!!$F2 | 554 |
33 | TraesCS7D01G232500 | chr6D | 464400811 | 464401348 | 537 | False | 652.00 | 652 | 89.114 | 247 | 768 | 1 | chr6D.!!$F4 | 521 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
179 | 180 | 0.110373 | GTTTCTTTGTACGCCCGCTG | 60.110 | 55.0 | 0.0 | 0.0 | 0.0 | 5.18 | F |
180 | 181 | 0.249953 | TTTCTTTGTACGCCCGCTGA | 60.250 | 50.0 | 0.0 | 0.0 | 0.0 | 4.26 | F |
184 | 185 | 0.533308 | TTTGTACGCCCGCTGAACTT | 60.533 | 50.0 | 0.0 | 0.0 | 0.0 | 2.66 | F |
186 | 187 | 0.533308 | TGTACGCCCGCTGAACTTTT | 60.533 | 50.0 | 0.0 | 0.0 | 0.0 | 2.27 | F |
230 | 231 | 1.082117 | GTCCTGATAACGCCCACACG | 61.082 | 60.0 | 0.0 | 0.0 | 39.5 | 4.49 | F |
1023 | 1112 | 1.355066 | CGCGAGGACAAAGAAGAGCC | 61.355 | 60.0 | 0.0 | 0.0 | 0.0 | 4.70 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1284 | 1385 | 0.183492 | GGCACATCAGCTTGGGGATA | 59.817 | 55.000 | 0.0 | 0.0 | 34.17 | 2.59 | R |
1395 | 1496 | 2.606213 | TCACGGAGGACCATGCCA | 60.606 | 61.111 | 0.0 | 0.0 | 35.59 | 4.92 | R |
2589 | 2709 | 3.315142 | GATGCCGAGCACCTGGTCA | 62.315 | 63.158 | 0.0 | 0.0 | 43.04 | 4.02 | R |
2643 | 2766 | 0.958822 | AAACGCACAATCCTTCCACC | 59.041 | 50.000 | 0.0 | 0.0 | 0.00 | 4.61 | R |
2753 | 2876 | 0.458025 | GAAGCGAGGTCACGGGTTAG | 60.458 | 60.000 | 0.0 | 0.0 | 0.00 | 2.34 | R |
2842 | 2965 | 0.034670 | ACGGGCGTTCTACTAGTCCT | 60.035 | 55.000 | 0.0 | 0.0 | 0.00 | 3.85 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
17 | 18 | 2.925706 | TCCTTAGGGCCACGTGCA | 60.926 | 61.111 | 10.91 | 0.00 | 43.89 | 4.57 |
18 | 19 | 2.746277 | CCTTAGGGCCACGTGCAC | 60.746 | 66.667 | 10.91 | 6.82 | 46.89 | 4.57 |
23 | 24 | 4.868026 | GGGCCACGTGCACATATA | 57.132 | 55.556 | 18.64 | 0.00 | 45.34 | 0.86 |
24 | 25 | 3.322514 | GGGCCACGTGCACATATAT | 57.677 | 52.632 | 18.64 | 0.00 | 45.34 | 0.86 |
25 | 26 | 2.465860 | GGGCCACGTGCACATATATA | 57.534 | 50.000 | 18.64 | 0.00 | 45.34 | 0.86 |
26 | 27 | 2.985896 | GGGCCACGTGCACATATATAT | 58.014 | 47.619 | 18.64 | 0.00 | 45.34 | 0.86 |
27 | 28 | 3.343617 | GGGCCACGTGCACATATATATT | 58.656 | 45.455 | 18.64 | 0.00 | 45.34 | 1.28 |
28 | 29 | 3.756434 | GGGCCACGTGCACATATATATTT | 59.244 | 43.478 | 18.64 | 0.00 | 45.34 | 1.40 |
29 | 30 | 4.142687 | GGGCCACGTGCACATATATATTTC | 60.143 | 45.833 | 18.64 | 0.00 | 45.34 | 2.17 |
30 | 31 | 4.435518 | GGCCACGTGCACATATATATTTCG | 60.436 | 45.833 | 18.64 | 0.02 | 43.89 | 3.46 |
31 | 32 | 4.435518 | GCCACGTGCACATATATATTTCGG | 60.436 | 45.833 | 18.64 | 0.00 | 40.77 | 4.30 |
32 | 33 | 4.435518 | CCACGTGCACATATATATTTCGGC | 60.436 | 45.833 | 18.64 | 0.00 | 0.00 | 5.54 |
33 | 34 | 4.388773 | CACGTGCACATATATATTTCGGCT | 59.611 | 41.667 | 18.64 | 0.00 | 0.00 | 5.52 |
34 | 35 | 4.388773 | ACGTGCACATATATATTTCGGCTG | 59.611 | 41.667 | 18.64 | 0.00 | 0.00 | 4.85 |
35 | 36 | 4.388773 | CGTGCACATATATATTTCGGCTGT | 59.611 | 41.667 | 18.64 | 0.00 | 0.00 | 4.40 |
36 | 37 | 5.444613 | CGTGCACATATATATTTCGGCTGTC | 60.445 | 44.000 | 18.64 | 0.00 | 0.00 | 3.51 |
37 | 38 | 5.408299 | GTGCACATATATATTTCGGCTGTCA | 59.592 | 40.000 | 13.17 | 0.00 | 0.00 | 3.58 |
38 | 39 | 6.092670 | GTGCACATATATATTTCGGCTGTCAT | 59.907 | 38.462 | 13.17 | 0.00 | 0.00 | 3.06 |
39 | 40 | 6.654582 | TGCACATATATATTTCGGCTGTCATT | 59.345 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
40 | 41 | 6.963242 | GCACATATATATTTCGGCTGTCATTG | 59.037 | 38.462 | 0.00 | 0.00 | 0.00 | 2.82 |
41 | 42 | 7.148423 | GCACATATATATTTCGGCTGTCATTGA | 60.148 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
42 | 43 | 8.886719 | CACATATATATTTCGGCTGTCATTGAT | 58.113 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
46 | 47 | 6.808008 | ATATTTCGGCTGTCATTGATAAGG | 57.192 | 37.500 | 0.00 | 0.00 | 0.00 | 2.69 |
47 | 48 | 3.627395 | TTCGGCTGTCATTGATAAGGT | 57.373 | 42.857 | 0.00 | 0.00 | 0.00 | 3.50 |
48 | 49 | 3.179443 | TCGGCTGTCATTGATAAGGTC | 57.821 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
49 | 50 | 2.499693 | TCGGCTGTCATTGATAAGGTCA | 59.500 | 45.455 | 0.00 | 0.00 | 34.25 | 4.02 |
50 | 51 | 2.868583 | CGGCTGTCATTGATAAGGTCAG | 59.131 | 50.000 | 0.00 | 0.00 | 38.29 | 3.51 |
51 | 52 | 3.679917 | CGGCTGTCATTGATAAGGTCAGT | 60.680 | 47.826 | 0.00 | 0.00 | 38.29 | 3.41 |
52 | 53 | 3.873952 | GGCTGTCATTGATAAGGTCAGTC | 59.126 | 47.826 | 0.00 | 0.00 | 38.29 | 3.51 |
53 | 54 | 4.383552 | GGCTGTCATTGATAAGGTCAGTCT | 60.384 | 45.833 | 0.00 | 0.00 | 38.29 | 3.24 |
54 | 55 | 4.569966 | GCTGTCATTGATAAGGTCAGTCTG | 59.430 | 45.833 | 0.00 | 0.00 | 38.29 | 3.51 |
55 | 56 | 5.089970 | TGTCATTGATAAGGTCAGTCTGG | 57.910 | 43.478 | 0.00 | 0.00 | 38.29 | 3.86 |
56 | 57 | 3.873952 | GTCATTGATAAGGTCAGTCTGGC | 59.126 | 47.826 | 0.00 | 0.00 | 38.29 | 4.85 |
57 | 58 | 3.776969 | TCATTGATAAGGTCAGTCTGGCT | 59.223 | 43.478 | 4.09 | 0.00 | 38.29 | 4.75 |
58 | 59 | 4.225942 | TCATTGATAAGGTCAGTCTGGCTT | 59.774 | 41.667 | 4.09 | 0.00 | 38.29 | 4.35 |
59 | 60 | 3.895232 | TGATAAGGTCAGTCTGGCTTC | 57.105 | 47.619 | 4.09 | 0.00 | 31.80 | 3.86 |
60 | 61 | 2.166459 | TGATAAGGTCAGTCTGGCTTCG | 59.834 | 50.000 | 4.09 | 0.00 | 31.80 | 3.79 |
61 | 62 | 0.895530 | TAAGGTCAGTCTGGCTTCGG | 59.104 | 55.000 | 4.09 | 0.00 | 0.00 | 4.30 |
62 | 63 | 0.832135 | AAGGTCAGTCTGGCTTCGGA | 60.832 | 55.000 | 4.09 | 0.00 | 0.00 | 4.55 |
63 | 64 | 0.832135 | AGGTCAGTCTGGCTTCGGAA | 60.832 | 55.000 | 4.09 | 0.00 | 0.00 | 4.30 |
64 | 65 | 0.250513 | GGTCAGTCTGGCTTCGGAAT | 59.749 | 55.000 | 4.09 | 0.00 | 0.00 | 3.01 |
65 | 66 | 1.363744 | GTCAGTCTGGCTTCGGAATG | 58.636 | 55.000 | 0.00 | 0.00 | 41.65 | 2.67 |
66 | 67 | 1.066858 | GTCAGTCTGGCTTCGGAATGA | 60.067 | 52.381 | 0.00 | 1.85 | 45.19 | 2.57 |
67 | 68 | 1.066858 | TCAGTCTGGCTTCGGAATGAC | 60.067 | 52.381 | 0.00 | 0.00 | 43.35 | 3.06 |
68 | 69 | 0.976641 | AGTCTGGCTTCGGAATGACA | 59.023 | 50.000 | 12.37 | 6.06 | 0.00 | 3.58 |
69 | 70 | 1.066573 | AGTCTGGCTTCGGAATGACAG | 60.067 | 52.381 | 13.57 | 13.57 | 0.00 | 3.51 |
70 | 71 | 0.976641 | TCTGGCTTCGGAATGACAGT | 59.023 | 50.000 | 17.06 | 0.00 | 0.00 | 3.55 |
71 | 72 | 1.081892 | CTGGCTTCGGAATGACAGTG | 58.918 | 55.000 | 12.24 | 0.00 | 0.00 | 3.66 |
72 | 73 | 0.321564 | TGGCTTCGGAATGACAGTGG | 60.322 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
73 | 74 | 1.648467 | GGCTTCGGAATGACAGTGGC | 61.648 | 60.000 | 0.00 | 0.00 | 0.00 | 5.01 |
74 | 75 | 1.970917 | GCTTCGGAATGACAGTGGCG | 61.971 | 60.000 | 0.00 | 0.00 | 0.00 | 5.69 |
75 | 76 | 0.389817 | CTTCGGAATGACAGTGGCGA | 60.390 | 55.000 | 0.00 | 0.00 | 0.00 | 5.54 |
76 | 77 | 0.249120 | TTCGGAATGACAGTGGCGAT | 59.751 | 50.000 | 0.00 | 0.00 | 0.00 | 4.58 |
77 | 78 | 0.460109 | TCGGAATGACAGTGGCGATG | 60.460 | 55.000 | 0.00 | 0.00 | 0.00 | 3.84 |
78 | 79 | 0.460109 | CGGAATGACAGTGGCGATGA | 60.460 | 55.000 | 0.00 | 0.00 | 0.00 | 2.92 |
79 | 80 | 1.293924 | GGAATGACAGTGGCGATGAG | 58.706 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
80 | 81 | 1.293924 | GAATGACAGTGGCGATGAGG | 58.706 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
81 | 82 | 0.745845 | AATGACAGTGGCGATGAGGC | 60.746 | 55.000 | 0.00 | 0.00 | 46.95 | 4.70 |
88 | 89 | 2.184322 | GGCGATGAGGCGAGTCAA | 59.816 | 61.111 | 0.00 | 0.00 | 35.04 | 3.18 |
89 | 90 | 2.167861 | GGCGATGAGGCGAGTCAAC | 61.168 | 63.158 | 0.00 | 0.00 | 35.04 | 3.18 |
90 | 91 | 1.446099 | GCGATGAGGCGAGTCAACA | 60.446 | 57.895 | 0.00 | 0.00 | 0.00 | 3.33 |
91 | 92 | 1.014044 | GCGATGAGGCGAGTCAACAA | 61.014 | 55.000 | 0.00 | 0.00 | 0.00 | 2.83 |
92 | 93 | 0.716108 | CGATGAGGCGAGTCAACAAC | 59.284 | 55.000 | 0.00 | 0.00 | 0.00 | 3.32 |
93 | 94 | 1.670087 | CGATGAGGCGAGTCAACAACT | 60.670 | 52.381 | 0.00 | 0.00 | 42.42 | 3.16 |
103 | 104 | 3.105937 | GAGTCAACAACTCGTTTTTGGC | 58.894 | 45.455 | 5.41 | 5.41 | 44.79 | 4.52 |
104 | 105 | 2.490115 | AGTCAACAACTCGTTTTTGGCA | 59.510 | 40.909 | 13.63 | 0.00 | 37.33 | 4.92 |
105 | 106 | 3.057174 | AGTCAACAACTCGTTTTTGGCAA | 60.057 | 39.130 | 13.63 | 0.00 | 37.33 | 4.52 |
106 | 107 | 3.060230 | GTCAACAACTCGTTTTTGGCAAC | 59.940 | 43.478 | 0.00 | 0.00 | 35.59 | 4.17 |
113 | 114 | 1.749153 | CGTTTTTGGCAACGGTACTG | 58.251 | 50.000 | 0.00 | 0.00 | 44.75 | 2.74 |
114 | 115 | 1.331138 | CGTTTTTGGCAACGGTACTGA | 59.669 | 47.619 | 9.17 | 0.00 | 44.75 | 3.41 |
115 | 116 | 2.723209 | GTTTTTGGCAACGGTACTGAC | 58.277 | 47.619 | 9.17 | 0.00 | 42.51 | 3.51 |
116 | 117 | 1.310904 | TTTTGGCAACGGTACTGACC | 58.689 | 50.000 | 9.17 | 7.41 | 43.03 | 4.02 |
128 | 129 | 3.195661 | GGTACTGACCGTTCAATGATCC | 58.804 | 50.000 | 0.00 | 0.00 | 35.52 | 3.36 |
129 | 130 | 3.369052 | GGTACTGACCGTTCAATGATCCA | 60.369 | 47.826 | 0.00 | 0.00 | 35.52 | 3.41 |
130 | 131 | 2.977914 | ACTGACCGTTCAATGATCCAG | 58.022 | 47.619 | 0.00 | 0.00 | 0.00 | 3.86 |
131 | 132 | 2.283298 | CTGACCGTTCAATGATCCAGG | 58.717 | 52.381 | 0.00 | 0.00 | 0.00 | 4.45 |
132 | 133 | 1.065491 | TGACCGTTCAATGATCCAGGG | 60.065 | 52.381 | 0.00 | 0.00 | 0.00 | 4.45 |
133 | 134 | 0.991920 | ACCGTTCAATGATCCAGGGT | 59.008 | 50.000 | 0.00 | 0.00 | 0.00 | 4.34 |
134 | 135 | 1.340017 | ACCGTTCAATGATCCAGGGTG | 60.340 | 52.381 | 0.00 | 0.00 | 0.00 | 4.61 |
135 | 136 | 1.382522 | CGTTCAATGATCCAGGGTGG | 58.617 | 55.000 | 0.00 | 0.00 | 39.43 | 4.61 |
136 | 137 | 1.340017 | CGTTCAATGATCCAGGGTGGT | 60.340 | 52.381 | 0.00 | 0.00 | 39.03 | 4.16 |
137 | 138 | 2.094675 | GTTCAATGATCCAGGGTGGTG | 58.905 | 52.381 | 0.00 | 0.00 | 39.03 | 4.17 |
138 | 139 | 1.371467 | TCAATGATCCAGGGTGGTGT | 58.629 | 50.000 | 0.00 | 0.00 | 39.03 | 4.16 |
139 | 140 | 2.556766 | TCAATGATCCAGGGTGGTGTA | 58.443 | 47.619 | 0.00 | 0.00 | 39.03 | 2.90 |
140 | 141 | 3.122480 | TCAATGATCCAGGGTGGTGTAT | 58.878 | 45.455 | 0.00 | 0.00 | 39.03 | 2.29 |
141 | 142 | 3.527253 | TCAATGATCCAGGGTGGTGTATT | 59.473 | 43.478 | 0.00 | 0.00 | 39.03 | 1.89 |
142 | 143 | 4.017591 | TCAATGATCCAGGGTGGTGTATTT | 60.018 | 41.667 | 0.00 | 0.00 | 39.03 | 1.40 |
143 | 144 | 4.608170 | ATGATCCAGGGTGGTGTATTTT | 57.392 | 40.909 | 0.00 | 0.00 | 39.03 | 1.82 |
144 | 145 | 4.396357 | TGATCCAGGGTGGTGTATTTTT | 57.604 | 40.909 | 0.00 | 0.00 | 39.03 | 1.94 |
173 | 174 | 6.484818 | TTATGTTAGGGTTTCTTTGTACGC | 57.515 | 37.500 | 0.00 | 0.00 | 0.00 | 4.42 |
174 | 175 | 3.140623 | TGTTAGGGTTTCTTTGTACGCC | 58.859 | 45.455 | 0.00 | 0.00 | 0.00 | 5.68 |
175 | 176 | 2.477845 | TAGGGTTTCTTTGTACGCCC | 57.522 | 50.000 | 0.00 | 0.00 | 36.46 | 6.13 |
176 | 177 | 0.604511 | AGGGTTTCTTTGTACGCCCG | 60.605 | 55.000 | 0.00 | 0.00 | 40.86 | 6.13 |
177 | 178 | 1.208358 | GGTTTCTTTGTACGCCCGC | 59.792 | 57.895 | 0.00 | 0.00 | 0.00 | 6.13 |
178 | 179 | 1.232621 | GGTTTCTTTGTACGCCCGCT | 61.233 | 55.000 | 0.00 | 0.00 | 0.00 | 5.52 |
179 | 180 | 0.110373 | GTTTCTTTGTACGCCCGCTG | 60.110 | 55.000 | 0.00 | 0.00 | 0.00 | 5.18 |
180 | 181 | 0.249953 | TTTCTTTGTACGCCCGCTGA | 60.250 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
181 | 182 | 0.249953 | TTCTTTGTACGCCCGCTGAA | 60.250 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
182 | 183 | 0.947180 | TCTTTGTACGCCCGCTGAAC | 60.947 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
183 | 184 | 0.949105 | CTTTGTACGCCCGCTGAACT | 60.949 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
184 | 185 | 0.533308 | TTTGTACGCCCGCTGAACTT | 60.533 | 50.000 | 0.00 | 0.00 | 0.00 | 2.66 |
185 | 186 | 0.533308 | TTGTACGCCCGCTGAACTTT | 60.533 | 50.000 | 0.00 | 0.00 | 0.00 | 2.66 |
186 | 187 | 0.533308 | TGTACGCCCGCTGAACTTTT | 60.533 | 50.000 | 0.00 | 0.00 | 0.00 | 2.27 |
187 | 188 | 1.270199 | TGTACGCCCGCTGAACTTTTA | 60.270 | 47.619 | 0.00 | 0.00 | 0.00 | 1.52 |
188 | 189 | 2.004733 | GTACGCCCGCTGAACTTTTAT | 58.995 | 47.619 | 0.00 | 0.00 | 0.00 | 1.40 |
189 | 190 | 2.389962 | ACGCCCGCTGAACTTTTATA | 57.610 | 45.000 | 0.00 | 0.00 | 0.00 | 0.98 |
190 | 191 | 2.004733 | ACGCCCGCTGAACTTTTATAC | 58.995 | 47.619 | 0.00 | 0.00 | 0.00 | 1.47 |
191 | 192 | 2.277084 | CGCCCGCTGAACTTTTATACT | 58.723 | 47.619 | 0.00 | 0.00 | 0.00 | 2.12 |
192 | 193 | 2.284417 | CGCCCGCTGAACTTTTATACTC | 59.716 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
193 | 194 | 3.532542 | GCCCGCTGAACTTTTATACTCT | 58.467 | 45.455 | 0.00 | 0.00 | 0.00 | 3.24 |
194 | 195 | 3.309954 | GCCCGCTGAACTTTTATACTCTG | 59.690 | 47.826 | 0.00 | 0.00 | 0.00 | 3.35 |
195 | 196 | 4.504858 | CCCGCTGAACTTTTATACTCTGT | 58.495 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
196 | 197 | 5.657474 | CCCGCTGAACTTTTATACTCTGTA | 58.343 | 41.667 | 0.00 | 0.00 | 0.00 | 2.74 |
197 | 198 | 5.749109 | CCCGCTGAACTTTTATACTCTGTAG | 59.251 | 44.000 | 0.00 | 0.00 | 0.00 | 2.74 |
198 | 199 | 6.331061 | CCGCTGAACTTTTATACTCTGTAGT | 58.669 | 40.000 | 0.00 | 0.00 | 39.91 | 2.73 |
199 | 200 | 7.415989 | CCCGCTGAACTTTTATACTCTGTAGTA | 60.416 | 40.741 | 0.00 | 0.00 | 42.35 | 1.82 |
200 | 201 | 7.972277 | CCGCTGAACTTTTATACTCTGTAGTAA | 59.028 | 37.037 | 0.00 | 0.00 | 41.49 | 2.24 |
201 | 202 | 9.517609 | CGCTGAACTTTTATACTCTGTAGTAAT | 57.482 | 33.333 | 0.00 | 0.00 | 41.49 | 1.89 |
215 | 216 | 7.518303 | ACTCTGTAGTAATAGATCTAGGGTCCT | 59.482 | 40.741 | 8.70 | 2.68 | 32.84 | 3.85 |
230 | 231 | 1.082117 | GTCCTGATAACGCCCACACG | 61.082 | 60.000 | 0.00 | 0.00 | 39.50 | 4.49 |
242 | 243 | 3.720531 | CACACGTGTGGGCGTTAA | 58.279 | 55.556 | 35.65 | 0.00 | 43.83 | 2.01 |
243 | 244 | 1.567537 | CACACGTGTGGGCGTTAAG | 59.432 | 57.895 | 35.65 | 11.35 | 43.83 | 1.85 |
244 | 245 | 1.595929 | ACACGTGTGGGCGTTAAGG | 60.596 | 57.895 | 22.71 | 0.00 | 43.83 | 2.69 |
245 | 246 | 2.031465 | ACGTGTGGGCGTTAAGGG | 59.969 | 61.111 | 0.00 | 0.00 | 43.04 | 3.95 |
279 | 280 | 1.525077 | GGTCTGGCCACACGTTTCA | 60.525 | 57.895 | 0.00 | 0.00 | 37.17 | 2.69 |
466 | 489 | 2.279186 | CGCGTGACAGTCACCACA | 60.279 | 61.111 | 25.11 | 0.00 | 44.20 | 4.17 |
689 | 765 | 5.537188 | TGCCATGATTTGAAAACTAACACC | 58.463 | 37.500 | 0.00 | 0.00 | 0.00 | 4.16 |
771 | 852 | 3.944015 | GAGAGTTGCCATCTGCTTACAAT | 59.056 | 43.478 | 0.00 | 0.00 | 42.00 | 2.71 |
772 | 853 | 3.693085 | AGAGTTGCCATCTGCTTACAATG | 59.307 | 43.478 | 0.00 | 0.00 | 42.00 | 2.82 |
773 | 854 | 2.756760 | AGTTGCCATCTGCTTACAATGG | 59.243 | 45.455 | 0.00 | 0.00 | 42.38 | 3.16 |
778 | 859 | 3.544684 | CCATCTGCTTACAATGGCTACA | 58.455 | 45.455 | 0.00 | 0.00 | 34.02 | 2.74 |
779 | 860 | 3.947196 | CCATCTGCTTACAATGGCTACAA | 59.053 | 43.478 | 0.00 | 0.00 | 34.02 | 2.41 |
780 | 861 | 4.036027 | CCATCTGCTTACAATGGCTACAAG | 59.964 | 45.833 | 0.00 | 0.00 | 34.02 | 3.16 |
781 | 862 | 3.009723 | TCTGCTTACAATGGCTACAAGC | 58.990 | 45.455 | 0.00 | 0.00 | 41.51 | 4.01 |
782 | 863 | 2.749076 | CTGCTTACAATGGCTACAAGCA | 59.251 | 45.455 | 7.07 | 7.07 | 46.78 | 3.91 |
783 | 864 | 3.355378 | TGCTTACAATGGCTACAAGCAT | 58.645 | 40.909 | 3.35 | 0.00 | 44.79 | 3.79 |
784 | 865 | 3.129113 | TGCTTACAATGGCTACAAGCATG | 59.871 | 43.478 | 3.35 | 0.00 | 44.79 | 4.06 |
785 | 866 | 3.378112 | GCTTACAATGGCTACAAGCATGA | 59.622 | 43.478 | 0.00 | 0.00 | 44.75 | 3.07 |
786 | 867 | 4.037208 | GCTTACAATGGCTACAAGCATGAT | 59.963 | 41.667 | 0.00 | 0.00 | 44.75 | 2.45 |
787 | 868 | 5.503662 | TTACAATGGCTACAAGCATGATG | 57.496 | 39.130 | 0.00 | 0.00 | 44.75 | 3.07 |
788 | 869 | 3.623703 | ACAATGGCTACAAGCATGATGA | 58.376 | 40.909 | 0.00 | 0.00 | 44.75 | 2.92 |
789 | 870 | 4.018490 | ACAATGGCTACAAGCATGATGAA | 58.982 | 39.130 | 0.00 | 0.00 | 44.75 | 2.57 |
790 | 871 | 4.463539 | ACAATGGCTACAAGCATGATGAAA | 59.536 | 37.500 | 0.00 | 0.00 | 44.75 | 2.69 |
791 | 872 | 5.047164 | ACAATGGCTACAAGCATGATGAAAA | 60.047 | 36.000 | 0.00 | 0.00 | 44.75 | 2.29 |
792 | 873 | 5.864418 | ATGGCTACAAGCATGATGAAAAT | 57.136 | 34.783 | 0.00 | 0.00 | 44.75 | 1.82 |
793 | 874 | 6.964807 | ATGGCTACAAGCATGATGAAAATA | 57.035 | 33.333 | 0.00 | 0.00 | 44.75 | 1.40 |
794 | 875 | 6.381481 | TGGCTACAAGCATGATGAAAATAG | 57.619 | 37.500 | 0.00 | 0.00 | 44.75 | 1.73 |
795 | 876 | 5.218139 | GGCTACAAGCATGATGAAAATAGC | 58.782 | 41.667 | 0.00 | 3.83 | 44.75 | 2.97 |
796 | 877 | 5.218139 | GCTACAAGCATGATGAAAATAGCC | 58.782 | 41.667 | 0.00 | 0.00 | 41.89 | 3.93 |
797 | 878 | 5.221106 | GCTACAAGCATGATGAAAATAGCCA | 60.221 | 40.000 | 0.00 | 0.00 | 41.89 | 4.75 |
798 | 879 | 5.664294 | ACAAGCATGATGAAAATAGCCAA | 57.336 | 34.783 | 0.00 | 0.00 | 0.00 | 4.52 |
799 | 880 | 5.413499 | ACAAGCATGATGAAAATAGCCAAC | 58.587 | 37.500 | 0.00 | 0.00 | 0.00 | 3.77 |
800 | 881 | 5.186409 | ACAAGCATGATGAAAATAGCCAACT | 59.814 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
801 | 882 | 5.927281 | AGCATGATGAAAATAGCCAACTT | 57.073 | 34.783 | 0.00 | 0.00 | 0.00 | 2.66 |
802 | 883 | 6.290294 | AGCATGATGAAAATAGCCAACTTT | 57.710 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
803 | 884 | 7.408756 | AGCATGATGAAAATAGCCAACTTTA | 57.591 | 32.000 | 0.00 | 0.00 | 0.00 | 1.85 |
804 | 885 | 7.486647 | AGCATGATGAAAATAGCCAACTTTAG | 58.513 | 34.615 | 0.00 | 0.00 | 0.00 | 1.85 |
805 | 886 | 6.698766 | GCATGATGAAAATAGCCAACTTTAGG | 59.301 | 38.462 | 0.00 | 0.00 | 0.00 | 2.69 |
806 | 887 | 7.416664 | GCATGATGAAAATAGCCAACTTTAGGA | 60.417 | 37.037 | 0.00 | 0.00 | 0.00 | 2.94 |
807 | 888 | 7.630242 | TGATGAAAATAGCCAACTTTAGGAG | 57.370 | 36.000 | 0.00 | 0.00 | 0.00 | 3.69 |
808 | 889 | 7.175104 | TGATGAAAATAGCCAACTTTAGGAGT | 58.825 | 34.615 | 0.00 | 0.00 | 41.47 | 3.85 |
818 | 899 | 3.697619 | ACTTTAGGAGTTGCCACCTAC | 57.302 | 47.619 | 0.00 | 0.00 | 38.31 | 3.18 |
819 | 900 | 3.248888 | ACTTTAGGAGTTGCCACCTACT | 58.751 | 45.455 | 0.00 | 0.00 | 38.31 | 2.57 |
820 | 901 | 4.422984 | ACTTTAGGAGTTGCCACCTACTA | 58.577 | 43.478 | 0.00 | 0.00 | 38.31 | 1.82 |
821 | 902 | 4.842380 | ACTTTAGGAGTTGCCACCTACTAA | 59.158 | 41.667 | 0.00 | 0.00 | 38.31 | 2.24 |
822 | 903 | 4.813750 | TTAGGAGTTGCCACCTACTAAC | 57.186 | 45.455 | 0.00 | 0.00 | 38.31 | 2.34 |
823 | 904 | 2.616524 | AGGAGTTGCCACCTACTAACA | 58.383 | 47.619 | 0.00 | 0.00 | 40.02 | 2.41 |
824 | 905 | 2.302157 | AGGAGTTGCCACCTACTAACAC | 59.698 | 50.000 | 0.00 | 0.00 | 40.02 | 3.32 |
825 | 906 | 2.302157 | GGAGTTGCCACCTACTAACACT | 59.698 | 50.000 | 0.00 | 0.00 | 36.34 | 3.55 |
826 | 907 | 3.512724 | GGAGTTGCCACCTACTAACACTA | 59.487 | 47.826 | 0.00 | 0.00 | 36.34 | 2.74 |
827 | 908 | 4.381718 | GGAGTTGCCACCTACTAACACTAG | 60.382 | 50.000 | 0.00 | 0.00 | 36.34 | 2.57 |
828 | 909 | 3.514309 | AGTTGCCACCTACTAACACTAGG | 59.486 | 47.826 | 0.00 | 0.00 | 37.40 | 3.02 |
829 | 910 | 1.829222 | TGCCACCTACTAACACTAGGC | 59.171 | 52.381 | 0.00 | 0.00 | 41.15 | 3.93 |
830 | 911 | 1.829222 | GCCACCTACTAACACTAGGCA | 59.171 | 52.381 | 0.00 | 0.00 | 40.50 | 4.75 |
831 | 912 | 2.159085 | GCCACCTACTAACACTAGGCAG | 60.159 | 54.545 | 0.00 | 0.00 | 40.50 | 4.85 |
832 | 913 | 3.097614 | CCACCTACTAACACTAGGCAGT | 58.902 | 50.000 | 0.00 | 0.00 | 35.04 | 4.40 |
833 | 914 | 3.514309 | CCACCTACTAACACTAGGCAGTT | 59.486 | 47.826 | 0.00 | 0.00 | 35.04 | 3.16 |
834 | 915 | 4.020485 | CCACCTACTAACACTAGGCAGTTT | 60.020 | 45.833 | 0.00 | 0.00 | 35.04 | 2.66 |
835 | 916 | 5.512576 | CCACCTACTAACACTAGGCAGTTTT | 60.513 | 44.000 | 0.00 | 0.00 | 35.04 | 2.43 |
857 | 938 | 3.194062 | TCGCTCACGCATGATGAAAATA | 58.806 | 40.909 | 0.00 | 0.00 | 39.84 | 1.40 |
862 | 943 | 5.614231 | GCTCACGCATGATGAAAATAGCTAG | 60.614 | 44.000 | 0.00 | 0.00 | 33.22 | 3.42 |
1023 | 1112 | 1.355066 | CGCGAGGACAAAGAAGAGCC | 61.355 | 60.000 | 0.00 | 0.00 | 0.00 | 4.70 |
1284 | 1385 | 1.666011 | CACCAGGTACTCGCACAGT | 59.334 | 57.895 | 0.00 | 0.00 | 34.60 | 3.55 |
1305 | 1406 | 2.357836 | CCCAAGCTGATGTGCCCT | 59.642 | 61.111 | 0.00 | 0.00 | 0.00 | 5.19 |
1395 | 1496 | 1.608717 | GGCTCATGACGGTGGAGAGT | 61.609 | 60.000 | 0.00 | 0.00 | 0.00 | 3.24 |
1680 | 1794 | 2.573689 | GTTCTCGGCGTCGTCTCG | 60.574 | 66.667 | 10.18 | 0.00 | 37.69 | 4.04 |
2643 | 2766 | 4.785453 | GTCAAGGAGGGCTGCGGG | 62.785 | 72.222 | 0.00 | 0.00 | 0.00 | 6.13 |
2726 | 2849 | 1.966451 | GTCCAGGAAAGGTGCACGG | 60.966 | 63.158 | 11.45 | 4.45 | 0.00 | 4.94 |
2753 | 2876 | 1.109323 | AGGGTTTGCTCCACAAGTGC | 61.109 | 55.000 | 0.00 | 0.00 | 40.06 | 4.40 |
2774 | 2897 | 2.125912 | CCCGTGACCTCGCTTCTG | 60.126 | 66.667 | 0.00 | 0.00 | 0.00 | 3.02 |
2812 | 2935 | 4.745549 | GCGCTAGCGTTTTTCCTG | 57.254 | 55.556 | 35.21 | 7.53 | 42.09 | 3.86 |
2813 | 2936 | 1.512098 | GCGCTAGCGTTTTTCCTGC | 60.512 | 57.895 | 35.21 | 13.88 | 42.09 | 4.85 |
2814 | 2937 | 1.134694 | CGCTAGCGTTTTTCCTGCC | 59.865 | 57.895 | 28.66 | 0.00 | 34.35 | 4.85 |
2815 | 2938 | 1.298859 | CGCTAGCGTTTTTCCTGCCT | 61.299 | 55.000 | 28.66 | 0.00 | 34.35 | 4.75 |
2816 | 2939 | 0.881796 | GCTAGCGTTTTTCCTGCCTT | 59.118 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
2817 | 2940 | 1.269723 | GCTAGCGTTTTTCCTGCCTTT | 59.730 | 47.619 | 0.00 | 0.00 | 0.00 | 3.11 |
2818 | 2941 | 2.288213 | GCTAGCGTTTTTCCTGCCTTTT | 60.288 | 45.455 | 0.00 | 0.00 | 0.00 | 2.27 |
2819 | 2942 | 2.223537 | AGCGTTTTTCCTGCCTTTTG | 57.776 | 45.000 | 0.00 | 0.00 | 0.00 | 2.44 |
2820 | 2943 | 1.480545 | AGCGTTTTTCCTGCCTTTTGT | 59.519 | 42.857 | 0.00 | 0.00 | 0.00 | 2.83 |
2821 | 2944 | 2.093711 | AGCGTTTTTCCTGCCTTTTGTT | 60.094 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
2822 | 2945 | 3.131400 | AGCGTTTTTCCTGCCTTTTGTTA | 59.869 | 39.130 | 0.00 | 0.00 | 0.00 | 2.41 |
2823 | 2946 | 4.055360 | GCGTTTTTCCTGCCTTTTGTTAT | 58.945 | 39.130 | 0.00 | 0.00 | 0.00 | 1.89 |
2824 | 2947 | 4.509970 | GCGTTTTTCCTGCCTTTTGTTATT | 59.490 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
2825 | 2948 | 5.007234 | GCGTTTTTCCTGCCTTTTGTTATTT | 59.993 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2826 | 2949 | 6.418141 | CGTTTTTCCTGCCTTTTGTTATTTG | 58.582 | 36.000 | 0.00 | 0.00 | 0.00 | 2.32 |
2827 | 2950 | 6.256757 | CGTTTTTCCTGCCTTTTGTTATTTGA | 59.743 | 34.615 | 0.00 | 0.00 | 0.00 | 2.69 |
2828 | 2951 | 7.042119 | CGTTTTTCCTGCCTTTTGTTATTTGAT | 60.042 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
2829 | 2952 | 8.620416 | GTTTTTCCTGCCTTTTGTTATTTGATT | 58.380 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
2830 | 2953 | 8.744568 | TTTTCCTGCCTTTTGTTATTTGATTT | 57.255 | 26.923 | 0.00 | 0.00 | 0.00 | 2.17 |
2831 | 2954 | 7.961325 | TTCCTGCCTTTTGTTATTTGATTTC | 57.039 | 32.000 | 0.00 | 0.00 | 0.00 | 2.17 |
2832 | 2955 | 6.155827 | TCCTGCCTTTTGTTATTTGATTTCG | 58.844 | 36.000 | 0.00 | 0.00 | 0.00 | 3.46 |
2833 | 2956 | 5.163963 | CCTGCCTTTTGTTATTTGATTTCGC | 60.164 | 40.000 | 0.00 | 0.00 | 0.00 | 4.70 |
2834 | 2957 | 5.537188 | TGCCTTTTGTTATTTGATTTCGCT | 58.463 | 33.333 | 0.00 | 0.00 | 0.00 | 4.93 |
2835 | 2958 | 5.988561 | TGCCTTTTGTTATTTGATTTCGCTT | 59.011 | 32.000 | 0.00 | 0.00 | 0.00 | 4.68 |
2836 | 2959 | 7.148641 | TGCCTTTTGTTATTTGATTTCGCTTA | 58.851 | 30.769 | 0.00 | 0.00 | 0.00 | 3.09 |
2837 | 2960 | 7.816995 | TGCCTTTTGTTATTTGATTTCGCTTAT | 59.183 | 29.630 | 0.00 | 0.00 | 0.00 | 1.73 |
2838 | 2961 | 8.655970 | GCCTTTTGTTATTTGATTTCGCTTATT | 58.344 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
3274 | 3400 | 8.166367 | ACGTTTAGCTAAAATAAGTAGACGTG | 57.834 | 34.615 | 20.22 | 0.00 | 0.00 | 4.49 |
3312 | 3438 | 0.602562 | GCATAGCACAACAAGGCCAA | 59.397 | 50.000 | 5.01 | 0.00 | 0.00 | 4.52 |
3475 | 3602 | 7.080724 | GCTTCACTTCTTCGAAGAATGAATTT | 58.919 | 34.615 | 34.70 | 20.51 | 45.90 | 1.82 |
3493 | 3620 | 1.514678 | TTGCTGCCGTGTTCACCATC | 61.515 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
3494 | 3621 | 1.672356 | GCTGCCGTGTTCACCATCT | 60.672 | 57.895 | 0.00 | 0.00 | 0.00 | 2.90 |
3495 | 3622 | 1.915614 | GCTGCCGTGTTCACCATCTG | 61.916 | 60.000 | 0.00 | 0.00 | 0.00 | 2.90 |
3496 | 3623 | 0.320683 | CTGCCGTGTTCACCATCTGA | 60.321 | 55.000 | 0.00 | 0.00 | 0.00 | 3.27 |
3497 | 3624 | 0.107643 | TGCCGTGTTCACCATCTGAA | 59.892 | 50.000 | 0.00 | 0.00 | 36.46 | 3.02 |
3498 | 3625 | 0.798776 | GCCGTGTTCACCATCTGAAG | 59.201 | 55.000 | 0.00 | 0.00 | 39.69 | 3.02 |
3499 | 3626 | 1.878102 | GCCGTGTTCACCATCTGAAGT | 60.878 | 52.381 | 0.00 | 0.00 | 39.69 | 3.01 |
3500 | 3627 | 2.494059 | CCGTGTTCACCATCTGAAGTT | 58.506 | 47.619 | 0.00 | 0.00 | 39.69 | 2.66 |
3501 | 3628 | 2.480419 | CCGTGTTCACCATCTGAAGTTC | 59.520 | 50.000 | 0.00 | 0.00 | 39.69 | 3.01 |
3502 | 3629 | 3.130633 | CGTGTTCACCATCTGAAGTTCA | 58.869 | 45.455 | 5.25 | 5.25 | 39.69 | 3.18 |
3503 | 3630 | 3.185188 | CGTGTTCACCATCTGAAGTTCAG | 59.815 | 47.826 | 24.37 | 24.37 | 45.59 | 3.02 |
3504 | 3631 | 4.130118 | GTGTTCACCATCTGAAGTTCAGT | 58.870 | 43.478 | 27.83 | 15.26 | 44.58 | 3.41 |
3505 | 3632 | 4.024556 | GTGTTCACCATCTGAAGTTCAGTG | 60.025 | 45.833 | 27.83 | 23.33 | 44.58 | 3.66 |
3506 | 3633 | 2.771089 | TCACCATCTGAAGTTCAGTGC | 58.229 | 47.619 | 27.83 | 0.00 | 44.58 | 4.40 |
3507 | 3634 | 2.104622 | TCACCATCTGAAGTTCAGTGCA | 59.895 | 45.455 | 27.83 | 13.03 | 44.58 | 4.57 |
3508 | 3635 | 3.079578 | CACCATCTGAAGTTCAGTGCAT | 58.920 | 45.455 | 27.83 | 14.60 | 44.58 | 3.96 |
3509 | 3636 | 4.020307 | TCACCATCTGAAGTTCAGTGCATA | 60.020 | 41.667 | 27.83 | 12.35 | 44.58 | 3.14 |
3510 | 3637 | 4.093998 | CACCATCTGAAGTTCAGTGCATAC | 59.906 | 45.833 | 27.83 | 0.00 | 44.58 | 2.39 |
3511 | 3638 | 4.256110 | CCATCTGAAGTTCAGTGCATACA | 58.744 | 43.478 | 27.83 | 11.01 | 44.58 | 2.29 |
3512 | 3639 | 4.696877 | CCATCTGAAGTTCAGTGCATACAA | 59.303 | 41.667 | 27.83 | 10.33 | 44.58 | 2.41 |
3513 | 3640 | 5.356190 | CCATCTGAAGTTCAGTGCATACAAT | 59.644 | 40.000 | 27.83 | 12.01 | 44.58 | 2.71 |
3514 | 3641 | 6.457934 | CCATCTGAAGTTCAGTGCATACAATC | 60.458 | 42.308 | 27.83 | 0.00 | 44.58 | 2.67 |
3515 | 3642 | 5.550290 | TCTGAAGTTCAGTGCATACAATCA | 58.450 | 37.500 | 27.83 | 5.71 | 44.58 | 2.57 |
3516 | 3643 | 5.640783 | TCTGAAGTTCAGTGCATACAATCAG | 59.359 | 40.000 | 27.83 | 2.89 | 44.58 | 2.90 |
3517 | 3644 | 5.550290 | TGAAGTTCAGTGCATACAATCAGA | 58.450 | 37.500 | 0.08 | 0.00 | 0.00 | 3.27 |
3518 | 3645 | 5.640783 | TGAAGTTCAGTGCATACAATCAGAG | 59.359 | 40.000 | 0.08 | 0.00 | 0.00 | 3.35 |
3519 | 3646 | 4.511527 | AGTTCAGTGCATACAATCAGAGG | 58.488 | 43.478 | 0.00 | 0.00 | 0.00 | 3.69 |
3520 | 3647 | 2.910199 | TCAGTGCATACAATCAGAGGC | 58.090 | 47.619 | 0.00 | 0.00 | 0.00 | 4.70 |
3521 | 3648 | 2.236893 | TCAGTGCATACAATCAGAGGCA | 59.763 | 45.455 | 0.00 | 0.00 | 0.00 | 4.75 |
3522 | 3649 | 3.118149 | TCAGTGCATACAATCAGAGGCAT | 60.118 | 43.478 | 0.00 | 0.00 | 33.43 | 4.40 |
3523 | 3650 | 3.003378 | CAGTGCATACAATCAGAGGCATG | 59.997 | 47.826 | 0.00 | 0.00 | 33.43 | 4.06 |
3524 | 3651 | 2.947652 | GTGCATACAATCAGAGGCATGT | 59.052 | 45.455 | 0.00 | 0.00 | 33.43 | 3.21 |
3525 | 3652 | 3.379372 | GTGCATACAATCAGAGGCATGTT | 59.621 | 43.478 | 0.00 | 0.00 | 33.43 | 2.71 |
3526 | 3653 | 4.576053 | GTGCATACAATCAGAGGCATGTTA | 59.424 | 41.667 | 0.00 | 0.00 | 33.43 | 2.41 |
3527 | 3654 | 4.576053 | TGCATACAATCAGAGGCATGTTAC | 59.424 | 41.667 | 0.00 | 0.00 | 0.00 | 2.50 |
3528 | 3655 | 4.023707 | GCATACAATCAGAGGCATGTTACC | 60.024 | 45.833 | 0.00 | 0.00 | 0.00 | 2.85 |
3529 | 3656 | 5.371526 | CATACAATCAGAGGCATGTTACCT | 58.628 | 41.667 | 0.00 | 0.00 | 41.41 | 3.08 |
3536 | 3663 | 3.350219 | GAGGCATGTTACCTCCAGAAA | 57.650 | 47.619 | 6.60 | 0.00 | 46.81 | 2.52 |
3537 | 3664 | 3.891049 | GAGGCATGTTACCTCCAGAAAT | 58.109 | 45.455 | 6.60 | 0.00 | 46.81 | 2.17 |
3538 | 3665 | 3.879892 | GAGGCATGTTACCTCCAGAAATC | 59.120 | 47.826 | 6.60 | 0.00 | 46.81 | 2.17 |
3539 | 3666 | 2.952310 | GGCATGTTACCTCCAGAAATCC | 59.048 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
3540 | 3667 | 2.952310 | GCATGTTACCTCCAGAAATCCC | 59.048 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3541 | 3668 | 3.372025 | GCATGTTACCTCCAGAAATCCCT | 60.372 | 47.826 | 0.00 | 0.00 | 0.00 | 4.20 |
3542 | 3669 | 4.141482 | GCATGTTACCTCCAGAAATCCCTA | 60.141 | 45.833 | 0.00 | 0.00 | 0.00 | 3.53 |
3543 | 3670 | 5.456763 | GCATGTTACCTCCAGAAATCCCTAT | 60.457 | 44.000 | 0.00 | 0.00 | 0.00 | 2.57 |
3544 | 3671 | 5.888982 | TGTTACCTCCAGAAATCCCTATC | 57.111 | 43.478 | 0.00 | 0.00 | 0.00 | 2.08 |
3545 | 3672 | 5.285401 | TGTTACCTCCAGAAATCCCTATCA | 58.715 | 41.667 | 0.00 | 0.00 | 0.00 | 2.15 |
3546 | 3673 | 5.729229 | TGTTACCTCCAGAAATCCCTATCAA | 59.271 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
3547 | 3674 | 6.216662 | TGTTACCTCCAGAAATCCCTATCAAA | 59.783 | 38.462 | 0.00 | 0.00 | 0.00 | 2.69 |
3548 | 3675 | 5.796502 | ACCTCCAGAAATCCCTATCAAAA | 57.203 | 39.130 | 0.00 | 0.00 | 0.00 | 2.44 |
3549 | 3676 | 5.760131 | ACCTCCAGAAATCCCTATCAAAAG | 58.240 | 41.667 | 0.00 | 0.00 | 0.00 | 2.27 |
3550 | 3677 | 5.492524 | ACCTCCAGAAATCCCTATCAAAAGA | 59.507 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
3551 | 3678 | 5.825151 | CCTCCAGAAATCCCTATCAAAAGAC | 59.175 | 44.000 | 0.00 | 0.00 | 0.00 | 3.01 |
3552 | 3679 | 6.387192 | TCCAGAAATCCCTATCAAAAGACA | 57.613 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
3553 | 3680 | 6.418101 | TCCAGAAATCCCTATCAAAAGACAG | 58.582 | 40.000 | 0.00 | 0.00 | 0.00 | 3.51 |
3554 | 3681 | 6.012508 | TCCAGAAATCCCTATCAAAAGACAGT | 60.013 | 38.462 | 0.00 | 0.00 | 0.00 | 3.55 |
3555 | 3682 | 6.094603 | CCAGAAATCCCTATCAAAAGACAGTG | 59.905 | 42.308 | 0.00 | 0.00 | 0.00 | 3.66 |
3556 | 3683 | 6.094603 | CAGAAATCCCTATCAAAAGACAGTGG | 59.905 | 42.308 | 0.00 | 0.00 | 0.00 | 4.00 |
3557 | 3684 | 5.520748 | AATCCCTATCAAAAGACAGTGGT | 57.479 | 39.130 | 0.00 | 0.00 | 0.00 | 4.16 |
3558 | 3685 | 4.993705 | TCCCTATCAAAAGACAGTGGTT | 57.006 | 40.909 | 0.00 | 0.00 | 0.00 | 3.67 |
3559 | 3686 | 5.319043 | TCCCTATCAAAAGACAGTGGTTT | 57.681 | 39.130 | 0.00 | 0.00 | 0.00 | 3.27 |
3560 | 3687 | 6.442541 | TCCCTATCAAAAGACAGTGGTTTA | 57.557 | 37.500 | 0.00 | 0.00 | 0.00 | 2.01 |
3561 | 3688 | 6.235664 | TCCCTATCAAAAGACAGTGGTTTAC | 58.764 | 40.000 | 0.00 | 0.00 | 0.00 | 2.01 |
3562 | 3689 | 6.043938 | TCCCTATCAAAAGACAGTGGTTTACT | 59.956 | 38.462 | 0.00 | 0.00 | 41.36 | 2.24 |
3563 | 3690 | 6.715264 | CCCTATCAAAAGACAGTGGTTTACTT | 59.285 | 38.462 | 0.00 | 0.00 | 37.60 | 2.24 |
3564 | 3691 | 7.094762 | CCCTATCAAAAGACAGTGGTTTACTTC | 60.095 | 40.741 | 0.00 | 0.00 | 37.60 | 3.01 |
3565 | 3692 | 6.635030 | ATCAAAAGACAGTGGTTTACTTCC | 57.365 | 37.500 | 0.00 | 0.00 | 37.60 | 3.46 |
3566 | 3693 | 4.885325 | TCAAAAGACAGTGGTTTACTTCCC | 59.115 | 41.667 | 0.00 | 0.00 | 37.60 | 3.97 |
3567 | 3694 | 4.790718 | AAAGACAGTGGTTTACTTCCCT | 57.209 | 40.909 | 0.00 | 0.00 | 37.60 | 4.20 |
3568 | 3695 | 3.771577 | AGACAGTGGTTTACTTCCCTG | 57.228 | 47.619 | 0.00 | 0.00 | 37.60 | 4.45 |
3569 | 3696 | 2.152016 | GACAGTGGTTTACTTCCCTGC | 58.848 | 52.381 | 0.00 | 0.00 | 37.60 | 4.85 |
3570 | 3697 | 1.493022 | ACAGTGGTTTACTTCCCTGCA | 59.507 | 47.619 | 0.00 | 0.00 | 37.60 | 4.41 |
3571 | 3698 | 2.108250 | ACAGTGGTTTACTTCCCTGCAT | 59.892 | 45.455 | 0.00 | 0.00 | 37.60 | 3.96 |
3572 | 3699 | 3.157087 | CAGTGGTTTACTTCCCTGCATT | 58.843 | 45.455 | 0.00 | 0.00 | 37.60 | 3.56 |
3573 | 3700 | 4.202524 | ACAGTGGTTTACTTCCCTGCATTA | 60.203 | 41.667 | 0.00 | 0.00 | 37.60 | 1.90 |
3574 | 3701 | 4.156008 | CAGTGGTTTACTTCCCTGCATTAC | 59.844 | 45.833 | 0.00 | 0.00 | 37.60 | 1.89 |
3575 | 3702 | 4.076394 | GTGGTTTACTTCCCTGCATTACA | 58.924 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
3576 | 3703 | 4.705023 | GTGGTTTACTTCCCTGCATTACAT | 59.295 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
3577 | 3704 | 5.185056 | GTGGTTTACTTCCCTGCATTACATT | 59.815 | 40.000 | 0.00 | 0.00 | 0.00 | 2.71 |
3578 | 3705 | 5.777732 | TGGTTTACTTCCCTGCATTACATTT | 59.222 | 36.000 | 0.00 | 0.00 | 0.00 | 2.32 |
3579 | 3706 | 6.099341 | GGTTTACTTCCCTGCATTACATTTG | 58.901 | 40.000 | 0.00 | 0.00 | 0.00 | 2.32 |
3580 | 3707 | 3.874392 | ACTTCCCTGCATTACATTTGC | 57.126 | 42.857 | 0.00 | 0.00 | 40.55 | 3.68 |
3581 | 3708 | 2.497273 | ACTTCCCTGCATTACATTTGCC | 59.503 | 45.455 | 0.00 | 0.00 | 39.39 | 4.52 |
3582 | 3709 | 2.228545 | TCCCTGCATTACATTTGCCA | 57.771 | 45.000 | 0.00 | 0.00 | 39.39 | 4.92 |
3583 | 3710 | 2.533916 | TCCCTGCATTACATTTGCCAA | 58.466 | 42.857 | 0.00 | 0.00 | 39.39 | 4.52 |
3584 | 3711 | 2.902486 | TCCCTGCATTACATTTGCCAAA | 59.098 | 40.909 | 0.00 | 0.00 | 39.39 | 3.28 |
3585 | 3712 | 3.326006 | TCCCTGCATTACATTTGCCAAAA | 59.674 | 39.130 | 0.00 | 0.00 | 39.39 | 2.44 |
3586 | 3713 | 3.685756 | CCCTGCATTACATTTGCCAAAAG | 59.314 | 43.478 | 0.00 | 0.00 | 39.39 | 2.27 |
3587 | 3714 | 4.563168 | CCCTGCATTACATTTGCCAAAAGA | 60.563 | 41.667 | 0.00 | 0.00 | 39.39 | 2.52 |
3588 | 3715 | 5.180271 | CCTGCATTACATTTGCCAAAAGAT | 58.820 | 37.500 | 0.00 | 0.00 | 39.39 | 2.40 |
3589 | 3716 | 6.339730 | CCTGCATTACATTTGCCAAAAGATA | 58.660 | 36.000 | 0.00 | 0.00 | 39.39 | 1.98 |
3590 | 3717 | 6.256321 | CCTGCATTACATTTGCCAAAAGATAC | 59.744 | 38.462 | 0.00 | 0.00 | 39.39 | 2.24 |
3591 | 3718 | 6.934056 | TGCATTACATTTGCCAAAAGATACT | 58.066 | 32.000 | 0.00 | 0.00 | 39.39 | 2.12 |
3592 | 3719 | 8.060931 | TGCATTACATTTGCCAAAAGATACTA | 57.939 | 30.769 | 0.00 | 0.00 | 39.39 | 1.82 |
3593 | 3720 | 8.526978 | TGCATTACATTTGCCAAAAGATACTAA | 58.473 | 29.630 | 0.00 | 0.00 | 39.39 | 2.24 |
3594 | 3721 | 9.023967 | GCATTACATTTGCCAAAAGATACTAAG | 57.976 | 33.333 | 0.00 | 0.00 | 33.95 | 2.18 |
3595 | 3722 | 9.023967 | CATTACATTTGCCAAAAGATACTAAGC | 57.976 | 33.333 | 0.00 | 0.00 | 0.00 | 3.09 |
3596 | 3723 | 6.588719 | ACATTTGCCAAAAGATACTAAGCA | 57.411 | 33.333 | 0.00 | 0.00 | 0.00 | 3.91 |
3597 | 3724 | 7.174107 | ACATTTGCCAAAAGATACTAAGCAT | 57.826 | 32.000 | 0.00 | 0.00 | 0.00 | 3.79 |
3598 | 3725 | 8.292444 | ACATTTGCCAAAAGATACTAAGCATA | 57.708 | 30.769 | 0.00 | 0.00 | 0.00 | 3.14 |
3599 | 3726 | 8.748412 | ACATTTGCCAAAAGATACTAAGCATAA | 58.252 | 29.630 | 0.00 | 0.00 | 0.00 | 1.90 |
3600 | 3727 | 9.023967 | CATTTGCCAAAAGATACTAAGCATAAC | 57.976 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
3601 | 3728 | 7.695480 | TTGCCAAAAGATACTAAGCATAACA | 57.305 | 32.000 | 0.00 | 0.00 | 0.00 | 2.41 |
3602 | 3729 | 7.880160 | TGCCAAAAGATACTAAGCATAACAT | 57.120 | 32.000 | 0.00 | 0.00 | 0.00 | 2.71 |
3603 | 3730 | 8.292444 | TGCCAAAAGATACTAAGCATAACATT | 57.708 | 30.769 | 0.00 | 0.00 | 0.00 | 2.71 |
3604 | 3731 | 9.402320 | TGCCAAAAGATACTAAGCATAACATTA | 57.598 | 29.630 | 0.00 | 0.00 | 0.00 | 1.90 |
3609 | 3736 | 9.914834 | AAAGATACTAAGCATAACATTAACCCA | 57.085 | 29.630 | 0.00 | 0.00 | 0.00 | 4.51 |
3615 | 3742 | 9.695155 | ACTAAGCATAACATTAACCCATTTAGT | 57.305 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
3618 | 3745 | 8.361169 | AGCATAACATTAACCCATTTAGTTGT | 57.639 | 30.769 | 0.00 | 0.00 | 0.00 | 3.32 |
3619 | 3746 | 8.466798 | AGCATAACATTAACCCATTTAGTTGTC | 58.533 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
3620 | 3747 | 8.466798 | GCATAACATTAACCCATTTAGTTGTCT | 58.533 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
3624 | 3751 | 9.975218 | AACATTAACCCATTTAGTTGTCTAGAT | 57.025 | 29.630 | 0.00 | 0.00 | 0.00 | 1.98 |
3628 | 3755 | 9.895138 | TTAACCCATTTAGTTGTCTAGATAACC | 57.105 | 33.333 | 23.97 | 10.16 | 33.60 | 2.85 |
3629 | 3756 | 7.504926 | ACCCATTTAGTTGTCTAGATAACCA | 57.495 | 36.000 | 23.97 | 11.82 | 33.60 | 3.67 |
3630 | 3757 | 7.565680 | ACCCATTTAGTTGTCTAGATAACCAG | 58.434 | 38.462 | 23.97 | 12.19 | 33.60 | 4.00 |
3631 | 3758 | 7.402071 | ACCCATTTAGTTGTCTAGATAACCAGA | 59.598 | 37.037 | 23.97 | 10.37 | 33.60 | 3.86 |
3632 | 3759 | 8.432805 | CCCATTTAGTTGTCTAGATAACCAGAT | 58.567 | 37.037 | 23.97 | 12.00 | 33.60 | 2.90 |
3633 | 3760 | 9.838339 | CCATTTAGTTGTCTAGATAACCAGATT | 57.162 | 33.333 | 23.97 | 11.24 | 33.60 | 2.40 |
3653 | 3780 | 9.850628 | CCAGATTAAATCATAAGCATTACATGG | 57.149 | 33.333 | 0.00 | 0.00 | 30.46 | 3.66 |
3666 | 3793 | 7.944729 | AGCATTACATGGTTCTTATTTCAGT | 57.055 | 32.000 | 0.00 | 0.00 | 37.84 | 3.41 |
3667 | 3794 | 7.765307 | AGCATTACATGGTTCTTATTTCAGTG | 58.235 | 34.615 | 0.00 | 0.00 | 37.84 | 3.66 |
3668 | 3795 | 7.611467 | AGCATTACATGGTTCTTATTTCAGTGA | 59.389 | 33.333 | 0.00 | 0.00 | 37.84 | 3.41 |
3669 | 3796 | 8.243426 | GCATTACATGGTTCTTATTTCAGTGAA | 58.757 | 33.333 | 0.08 | 0.08 | 0.00 | 3.18 |
3673 | 3800 | 7.661040 | ACATGGTTCTTATTTCAGTGAAAAGG | 58.339 | 34.615 | 21.57 | 13.97 | 35.11 | 3.11 |
3674 | 3801 | 7.505585 | ACATGGTTCTTATTTCAGTGAAAAGGA | 59.494 | 33.333 | 21.57 | 15.77 | 35.11 | 3.36 |
3675 | 3802 | 7.889873 | TGGTTCTTATTTCAGTGAAAAGGAA | 57.110 | 32.000 | 21.57 | 19.72 | 35.11 | 3.36 |
3676 | 3803 | 8.477419 | TGGTTCTTATTTCAGTGAAAAGGAAT | 57.523 | 30.769 | 21.57 | 8.01 | 35.11 | 3.01 |
3677 | 3804 | 9.581289 | TGGTTCTTATTTCAGTGAAAAGGAATA | 57.419 | 29.630 | 21.57 | 14.36 | 35.11 | 1.75 |
3678 | 3805 | 9.841880 | GGTTCTTATTTCAGTGAAAAGGAATAC | 57.158 | 33.333 | 21.57 | 14.36 | 35.11 | 1.89 |
3679 | 3806 | 9.841880 | GTTCTTATTTCAGTGAAAAGGAATACC | 57.158 | 33.333 | 21.57 | 10.48 | 35.11 | 2.73 |
3680 | 3807 | 8.263940 | TCTTATTTCAGTGAAAAGGAATACCG | 57.736 | 34.615 | 21.57 | 5.88 | 35.11 | 4.02 |
3681 | 3808 | 7.881232 | TCTTATTTCAGTGAAAAGGAATACCGT | 59.119 | 33.333 | 21.57 | 4.54 | 35.11 | 4.83 |
3682 | 3809 | 6.894339 | ATTTCAGTGAAAAGGAATACCGTT | 57.106 | 33.333 | 21.57 | 0.00 | 39.38 | 4.44 |
3683 | 3810 | 5.682943 | TTCAGTGAAAAGGAATACCGTTG | 57.317 | 39.130 | 2.20 | 0.00 | 41.83 | 4.10 |
3684 | 3811 | 4.963373 | TCAGTGAAAAGGAATACCGTTGA | 58.037 | 39.130 | 0.00 | 0.00 | 41.83 | 3.18 |
3685 | 3812 | 5.369833 | TCAGTGAAAAGGAATACCGTTGAA | 58.630 | 37.500 | 0.00 | 0.00 | 41.83 | 2.69 |
3686 | 3813 | 6.001460 | TCAGTGAAAAGGAATACCGTTGAAT | 58.999 | 36.000 | 0.00 | 0.00 | 41.83 | 2.57 |
3687 | 3814 | 7.162761 | TCAGTGAAAAGGAATACCGTTGAATA | 58.837 | 34.615 | 0.00 | 0.00 | 41.83 | 1.75 |
3688 | 3815 | 7.662258 | TCAGTGAAAAGGAATACCGTTGAATAA | 59.338 | 33.333 | 0.00 | 0.00 | 41.83 | 1.40 |
3689 | 3816 | 8.458843 | CAGTGAAAAGGAATACCGTTGAATAAT | 58.541 | 33.333 | 0.00 | 0.00 | 41.83 | 1.28 |
3690 | 3817 | 8.458843 | AGTGAAAAGGAATACCGTTGAATAATG | 58.541 | 33.333 | 0.00 | 0.00 | 41.83 | 1.90 |
3691 | 3818 | 8.455682 | GTGAAAAGGAATACCGTTGAATAATGA | 58.544 | 33.333 | 0.00 | 0.00 | 41.83 | 2.57 |
3692 | 3819 | 9.184523 | TGAAAAGGAATACCGTTGAATAATGAT | 57.815 | 29.630 | 0.00 | 0.00 | 41.83 | 2.45 |
3696 | 3823 | 8.617290 | AGGAATACCGTTGAATAATGATTACC | 57.383 | 34.615 | 0.00 | 0.00 | 41.83 | 2.85 |
3697 | 3824 | 8.215050 | AGGAATACCGTTGAATAATGATTACCA | 58.785 | 33.333 | 0.00 | 0.00 | 41.83 | 3.25 |
3698 | 3825 | 8.842280 | GGAATACCGTTGAATAATGATTACCAA | 58.158 | 33.333 | 0.00 | 0.00 | 0.00 | 3.67 |
3701 | 3828 | 6.503524 | ACCGTTGAATAATGATTACCAATGC | 58.496 | 36.000 | 12.27 | 0.00 | 0.00 | 3.56 |
3702 | 3829 | 6.096141 | ACCGTTGAATAATGATTACCAATGCA | 59.904 | 34.615 | 12.27 | 0.00 | 0.00 | 3.96 |
3703 | 3830 | 7.147312 | CCGTTGAATAATGATTACCAATGCAT | 58.853 | 34.615 | 0.00 | 0.00 | 0.00 | 3.96 |
3704 | 3831 | 7.115236 | CCGTTGAATAATGATTACCAATGCATG | 59.885 | 37.037 | 0.00 | 0.00 | 0.00 | 4.06 |
3705 | 3832 | 7.648908 | CGTTGAATAATGATTACCAATGCATGT | 59.351 | 33.333 | 0.00 | 0.00 | 0.00 | 3.21 |
3706 | 3833 | 8.971321 | GTTGAATAATGATTACCAATGCATGTC | 58.029 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
3707 | 3834 | 8.235359 | TGAATAATGATTACCAATGCATGTCA | 57.765 | 30.769 | 0.00 | 0.00 | 0.00 | 3.58 |
3708 | 3835 | 8.354426 | TGAATAATGATTACCAATGCATGTCAG | 58.646 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
3709 | 3836 | 4.579454 | ATGATTACCAATGCATGTCAGC | 57.421 | 40.909 | 0.00 | 0.00 | 0.00 | 4.26 |
3723 | 3850 | 5.432885 | CATGTCAGCATGCATAATTCAGA | 57.567 | 39.130 | 21.98 | 1.47 | 44.87 | 3.27 |
3724 | 3851 | 5.827666 | CATGTCAGCATGCATAATTCAGAA | 58.172 | 37.500 | 21.98 | 0.00 | 44.87 | 3.02 |
3725 | 3852 | 5.900865 | TGTCAGCATGCATAATTCAGAAA | 57.099 | 34.783 | 21.98 | 0.00 | 34.76 | 2.52 |
3726 | 3853 | 5.643664 | TGTCAGCATGCATAATTCAGAAAC | 58.356 | 37.500 | 21.98 | 1.74 | 34.76 | 2.78 |
3727 | 3854 | 5.039333 | GTCAGCATGCATAATTCAGAAACC | 58.961 | 41.667 | 21.98 | 0.00 | 34.76 | 3.27 |
3728 | 3855 | 4.705991 | TCAGCATGCATAATTCAGAAACCA | 59.294 | 37.500 | 21.98 | 0.00 | 34.76 | 3.67 |
3729 | 3856 | 4.802039 | CAGCATGCATAATTCAGAAACCAC | 59.198 | 41.667 | 21.98 | 0.00 | 0.00 | 4.16 |
3730 | 3857 | 4.463539 | AGCATGCATAATTCAGAAACCACA | 59.536 | 37.500 | 21.98 | 0.00 | 0.00 | 4.17 |
3731 | 3858 | 4.563976 | GCATGCATAATTCAGAAACCACAC | 59.436 | 41.667 | 14.21 | 0.00 | 0.00 | 3.82 |
3732 | 3859 | 4.418013 | TGCATAATTCAGAAACCACACG | 57.582 | 40.909 | 0.00 | 0.00 | 0.00 | 4.49 |
3733 | 3860 | 3.818210 | TGCATAATTCAGAAACCACACGT | 59.182 | 39.130 | 0.00 | 0.00 | 0.00 | 4.49 |
3734 | 3861 | 4.277174 | TGCATAATTCAGAAACCACACGTT | 59.723 | 37.500 | 0.00 | 0.00 | 35.70 | 3.99 |
3736 | 3863 | 6.017026 | TGCATAATTCAGAAACCACACGTTTA | 60.017 | 34.615 | 0.00 | 0.00 | 44.88 | 2.01 |
3737 | 3864 | 6.858993 | GCATAATTCAGAAACCACACGTTTAA | 59.141 | 34.615 | 0.00 | 0.00 | 44.88 | 1.52 |
3738 | 3865 | 7.540745 | GCATAATTCAGAAACCACACGTTTAAT | 59.459 | 33.333 | 0.00 | 0.00 | 44.88 | 1.40 |
3739 | 3866 | 9.061610 | CATAATTCAGAAACCACACGTTTAATC | 57.938 | 33.333 | 0.00 | 0.00 | 44.88 | 1.75 |
3740 | 3867 | 6.627395 | ATTCAGAAACCACACGTTTAATCA | 57.373 | 33.333 | 0.00 | 0.00 | 44.88 | 2.57 |
3741 | 3868 | 6.627395 | TTCAGAAACCACACGTTTAATCAT | 57.373 | 33.333 | 0.00 | 0.00 | 44.88 | 2.45 |
3742 | 3869 | 6.627395 | TCAGAAACCACACGTTTAATCATT | 57.373 | 33.333 | 0.00 | 0.00 | 44.88 | 2.57 |
3743 | 3870 | 7.033530 | TCAGAAACCACACGTTTAATCATTT | 57.966 | 32.000 | 0.00 | 0.00 | 44.88 | 2.32 |
3744 | 3871 | 8.155821 | TCAGAAACCACACGTTTAATCATTTA | 57.844 | 30.769 | 0.00 | 0.00 | 44.88 | 1.40 |
3745 | 3872 | 8.286800 | TCAGAAACCACACGTTTAATCATTTAG | 58.713 | 33.333 | 0.00 | 0.00 | 44.88 | 1.85 |
3746 | 3873 | 7.537306 | CAGAAACCACACGTTTAATCATTTAGG | 59.463 | 37.037 | 0.00 | 0.00 | 44.88 | 2.69 |
3747 | 3874 | 5.890424 | ACCACACGTTTAATCATTTAGGG | 57.110 | 39.130 | 0.00 | 0.00 | 0.00 | 3.53 |
3748 | 3875 | 4.703093 | ACCACACGTTTAATCATTTAGGGG | 59.297 | 41.667 | 0.00 | 0.00 | 0.00 | 4.79 |
3749 | 3876 | 4.097286 | CCACACGTTTAATCATTTAGGGGG | 59.903 | 45.833 | 0.00 | 0.00 | 0.00 | 5.40 |
3750 | 3877 | 3.697542 | ACACGTTTAATCATTTAGGGGGC | 59.302 | 43.478 | 0.00 | 0.00 | 0.00 | 5.80 |
3751 | 3878 | 3.697045 | CACGTTTAATCATTTAGGGGGCA | 59.303 | 43.478 | 0.00 | 0.00 | 0.00 | 5.36 |
3752 | 3879 | 3.951680 | ACGTTTAATCATTTAGGGGGCAG | 59.048 | 43.478 | 0.00 | 0.00 | 0.00 | 4.85 |
3753 | 3880 | 4.204012 | CGTTTAATCATTTAGGGGGCAGA | 58.796 | 43.478 | 0.00 | 0.00 | 0.00 | 4.26 |
3754 | 3881 | 4.827284 | CGTTTAATCATTTAGGGGGCAGAT | 59.173 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
3755 | 3882 | 6.001460 | CGTTTAATCATTTAGGGGGCAGATA | 58.999 | 40.000 | 0.00 | 0.00 | 0.00 | 1.98 |
3756 | 3883 | 6.072673 | CGTTTAATCATTTAGGGGGCAGATAC | 60.073 | 42.308 | 0.00 | 0.00 | 0.00 | 2.24 |
3757 | 3884 | 6.523035 | TTAATCATTTAGGGGGCAGATACA | 57.477 | 37.500 | 0.00 | 0.00 | 0.00 | 2.29 |
3758 | 3885 | 5.605540 | AATCATTTAGGGGGCAGATACAT | 57.394 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
3759 | 3886 | 5.605540 | ATCATTTAGGGGGCAGATACATT | 57.394 | 39.130 | 0.00 | 0.00 | 0.00 | 2.71 |
3760 | 3887 | 5.402054 | TCATTTAGGGGGCAGATACATTT | 57.598 | 39.130 | 0.00 | 0.00 | 0.00 | 2.32 |
3761 | 3888 | 5.139727 | TCATTTAGGGGGCAGATACATTTG | 58.860 | 41.667 | 0.00 | 0.00 | 0.00 | 2.32 |
3762 | 3889 | 4.601406 | TTTAGGGGGCAGATACATTTGT | 57.399 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
3763 | 3890 | 4.601406 | TTAGGGGGCAGATACATTTGTT | 57.399 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
1 | 2 | 2.746277 | GTGCACGTGGCCCTAAGG | 60.746 | 66.667 | 18.88 | 0.00 | 43.89 | 2.69 |
2 | 3 | 0.107897 | TATGTGCACGTGGCCCTAAG | 60.108 | 55.000 | 21.92 | 0.00 | 43.89 | 2.18 |
5 | 6 | 0.764890 | ATATATGTGCACGTGGCCCT | 59.235 | 50.000 | 21.92 | 3.84 | 43.89 | 5.19 |
6 | 7 | 2.465860 | TATATATGTGCACGTGGCCC | 57.534 | 50.000 | 21.92 | 0.59 | 43.89 | 5.80 |
7 | 8 | 4.435518 | CGAAATATATATGTGCACGTGGCC | 60.436 | 45.833 | 21.92 | 0.00 | 43.89 | 5.36 |
8 | 9 | 4.435518 | CCGAAATATATATGTGCACGTGGC | 60.436 | 45.833 | 21.92 | 10.30 | 45.13 | 5.01 |
9 | 10 | 4.435518 | GCCGAAATATATATGTGCACGTGG | 60.436 | 45.833 | 21.92 | 11.39 | 0.00 | 4.94 |
10 | 11 | 4.388773 | AGCCGAAATATATATGTGCACGTG | 59.611 | 41.667 | 21.92 | 12.28 | 0.00 | 4.49 |
11 | 12 | 4.388773 | CAGCCGAAATATATATGTGCACGT | 59.611 | 41.667 | 17.19 | 17.19 | 0.00 | 4.49 |
14 | 15 | 5.546526 | TGACAGCCGAAATATATATGTGCA | 58.453 | 37.500 | 0.00 | 0.00 | 0.00 | 4.57 |
15 | 16 | 6.668541 | ATGACAGCCGAAATATATATGTGC | 57.331 | 37.500 | 0.00 | 0.00 | 0.00 | 4.57 |
16 | 17 | 8.255394 | TCAATGACAGCCGAAATATATATGTG | 57.745 | 34.615 | 0.00 | 0.00 | 0.00 | 3.21 |
20 | 21 | 9.599866 | CCTTATCAATGACAGCCGAAATATATA | 57.400 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
21 | 22 | 8.103305 | ACCTTATCAATGACAGCCGAAATATAT | 58.897 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
22 | 23 | 7.450074 | ACCTTATCAATGACAGCCGAAATATA | 58.550 | 34.615 | 0.00 | 0.00 | 0.00 | 0.86 |
23 | 24 | 6.299141 | ACCTTATCAATGACAGCCGAAATAT | 58.701 | 36.000 | 0.00 | 0.00 | 0.00 | 1.28 |
24 | 25 | 5.680619 | ACCTTATCAATGACAGCCGAAATA | 58.319 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
25 | 26 | 4.526970 | ACCTTATCAATGACAGCCGAAAT | 58.473 | 39.130 | 0.00 | 0.00 | 0.00 | 2.17 |
26 | 27 | 3.938963 | GACCTTATCAATGACAGCCGAAA | 59.061 | 43.478 | 0.00 | 0.00 | 0.00 | 3.46 |
27 | 28 | 3.055458 | TGACCTTATCAATGACAGCCGAA | 60.055 | 43.478 | 0.00 | 0.00 | 33.02 | 4.30 |
28 | 29 | 2.499693 | TGACCTTATCAATGACAGCCGA | 59.500 | 45.455 | 0.00 | 0.00 | 33.02 | 5.54 |
29 | 30 | 2.868583 | CTGACCTTATCAATGACAGCCG | 59.131 | 50.000 | 0.00 | 0.00 | 36.69 | 5.52 |
30 | 31 | 3.873952 | GACTGACCTTATCAATGACAGCC | 59.126 | 47.826 | 0.00 | 0.00 | 36.69 | 4.85 |
31 | 32 | 4.569966 | CAGACTGACCTTATCAATGACAGC | 59.430 | 45.833 | 0.00 | 0.00 | 36.69 | 4.40 |
32 | 33 | 5.114780 | CCAGACTGACCTTATCAATGACAG | 58.885 | 45.833 | 3.32 | 0.00 | 36.69 | 3.51 |
33 | 34 | 4.623886 | GCCAGACTGACCTTATCAATGACA | 60.624 | 45.833 | 3.32 | 0.00 | 36.69 | 3.58 |
34 | 35 | 3.873952 | GCCAGACTGACCTTATCAATGAC | 59.126 | 47.826 | 3.32 | 0.00 | 36.69 | 3.06 |
35 | 36 | 3.776969 | AGCCAGACTGACCTTATCAATGA | 59.223 | 43.478 | 3.32 | 0.00 | 36.69 | 2.57 |
36 | 37 | 4.148128 | AGCCAGACTGACCTTATCAATG | 57.852 | 45.455 | 3.32 | 0.00 | 36.69 | 2.82 |
37 | 38 | 4.681781 | CGAAGCCAGACTGACCTTATCAAT | 60.682 | 45.833 | 3.32 | 0.00 | 36.69 | 2.57 |
38 | 39 | 3.368427 | CGAAGCCAGACTGACCTTATCAA | 60.368 | 47.826 | 3.32 | 0.00 | 36.69 | 2.57 |
39 | 40 | 2.166459 | CGAAGCCAGACTGACCTTATCA | 59.834 | 50.000 | 3.32 | 0.00 | 35.45 | 2.15 |
40 | 41 | 2.482142 | CCGAAGCCAGACTGACCTTATC | 60.482 | 54.545 | 3.32 | 0.00 | 0.00 | 1.75 |
41 | 42 | 1.482593 | CCGAAGCCAGACTGACCTTAT | 59.517 | 52.381 | 3.32 | 0.00 | 0.00 | 1.73 |
42 | 43 | 0.895530 | CCGAAGCCAGACTGACCTTA | 59.104 | 55.000 | 3.32 | 0.00 | 0.00 | 2.69 |
43 | 44 | 0.832135 | TCCGAAGCCAGACTGACCTT | 60.832 | 55.000 | 3.32 | 6.06 | 0.00 | 3.50 |
44 | 45 | 0.832135 | TTCCGAAGCCAGACTGACCT | 60.832 | 55.000 | 3.32 | 0.00 | 0.00 | 3.85 |
45 | 46 | 0.250513 | ATTCCGAAGCCAGACTGACC | 59.749 | 55.000 | 3.32 | 0.00 | 0.00 | 4.02 |
46 | 47 | 1.066858 | TCATTCCGAAGCCAGACTGAC | 60.067 | 52.381 | 3.32 | 0.00 | 0.00 | 3.51 |
47 | 48 | 1.066858 | GTCATTCCGAAGCCAGACTGA | 60.067 | 52.381 | 3.32 | 0.00 | 0.00 | 3.41 |
48 | 49 | 1.338105 | TGTCATTCCGAAGCCAGACTG | 60.338 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
49 | 50 | 0.976641 | TGTCATTCCGAAGCCAGACT | 59.023 | 50.000 | 0.00 | 0.00 | 0.00 | 3.24 |
50 | 51 | 1.338200 | ACTGTCATTCCGAAGCCAGAC | 60.338 | 52.381 | 10.02 | 5.59 | 0.00 | 3.51 |
51 | 52 | 0.976641 | ACTGTCATTCCGAAGCCAGA | 59.023 | 50.000 | 10.02 | 0.00 | 0.00 | 3.86 |
52 | 53 | 1.081892 | CACTGTCATTCCGAAGCCAG | 58.918 | 55.000 | 0.00 | 3.97 | 0.00 | 4.85 |
53 | 54 | 0.321564 | CCACTGTCATTCCGAAGCCA | 60.322 | 55.000 | 0.00 | 0.00 | 0.00 | 4.75 |
54 | 55 | 1.648467 | GCCACTGTCATTCCGAAGCC | 61.648 | 60.000 | 0.00 | 0.00 | 0.00 | 4.35 |
55 | 56 | 1.796796 | GCCACTGTCATTCCGAAGC | 59.203 | 57.895 | 0.00 | 0.00 | 0.00 | 3.86 |
56 | 57 | 0.389817 | TCGCCACTGTCATTCCGAAG | 60.390 | 55.000 | 0.00 | 0.00 | 0.00 | 3.79 |
57 | 58 | 0.249120 | ATCGCCACTGTCATTCCGAA | 59.751 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
58 | 59 | 0.460109 | CATCGCCACTGTCATTCCGA | 60.460 | 55.000 | 0.00 | 0.00 | 0.00 | 4.55 |
59 | 60 | 0.460109 | TCATCGCCACTGTCATTCCG | 60.460 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
60 | 61 | 1.293924 | CTCATCGCCACTGTCATTCC | 58.706 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
61 | 62 | 1.293924 | CCTCATCGCCACTGTCATTC | 58.706 | 55.000 | 0.00 | 0.00 | 0.00 | 2.67 |
62 | 63 | 0.745845 | GCCTCATCGCCACTGTCATT | 60.746 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
63 | 64 | 1.153289 | GCCTCATCGCCACTGTCAT | 60.153 | 57.895 | 0.00 | 0.00 | 0.00 | 3.06 |
64 | 65 | 2.265739 | GCCTCATCGCCACTGTCA | 59.734 | 61.111 | 0.00 | 0.00 | 0.00 | 3.58 |
65 | 66 | 2.887568 | CGCCTCATCGCCACTGTC | 60.888 | 66.667 | 0.00 | 0.00 | 0.00 | 3.51 |
66 | 67 | 3.362399 | CTCGCCTCATCGCCACTGT | 62.362 | 63.158 | 0.00 | 0.00 | 0.00 | 3.55 |
67 | 68 | 2.584418 | CTCGCCTCATCGCCACTG | 60.584 | 66.667 | 0.00 | 0.00 | 0.00 | 3.66 |
68 | 69 | 3.069980 | GACTCGCCTCATCGCCACT | 62.070 | 63.158 | 0.00 | 0.00 | 0.00 | 4.00 |
69 | 70 | 2.583593 | GACTCGCCTCATCGCCAC | 60.584 | 66.667 | 0.00 | 0.00 | 0.00 | 5.01 |
70 | 71 | 2.645192 | TTGACTCGCCTCATCGCCA | 61.645 | 57.895 | 0.00 | 0.00 | 0.00 | 5.69 |
71 | 72 | 2.167861 | GTTGACTCGCCTCATCGCC | 61.168 | 63.158 | 0.00 | 0.00 | 0.00 | 5.54 |
72 | 73 | 1.014044 | TTGTTGACTCGCCTCATCGC | 61.014 | 55.000 | 0.00 | 0.00 | 0.00 | 4.58 |
73 | 74 | 0.716108 | GTTGTTGACTCGCCTCATCG | 59.284 | 55.000 | 0.00 | 0.00 | 0.00 | 3.84 |
74 | 75 | 1.996191 | GAGTTGTTGACTCGCCTCATC | 59.004 | 52.381 | 0.00 | 0.00 | 44.90 | 2.92 |
75 | 76 | 2.086054 | GAGTTGTTGACTCGCCTCAT | 57.914 | 50.000 | 0.00 | 0.00 | 44.90 | 2.90 |
76 | 77 | 3.588277 | GAGTTGTTGACTCGCCTCA | 57.412 | 52.632 | 0.00 | 0.00 | 44.90 | 3.86 |
83 | 84 | 2.490115 | TGCCAAAAACGAGTTGTTGACT | 59.510 | 40.909 | 17.74 | 0.00 | 39.54 | 3.41 |
84 | 85 | 2.869897 | TGCCAAAAACGAGTTGTTGAC | 58.130 | 42.857 | 17.74 | 8.91 | 39.54 | 3.18 |
85 | 86 | 3.246619 | GTTGCCAAAAACGAGTTGTTGA | 58.753 | 40.909 | 17.74 | 0.00 | 39.54 | 3.18 |
86 | 87 | 3.633058 | GTTGCCAAAAACGAGTTGTTG | 57.367 | 42.857 | 10.98 | 10.98 | 40.84 | 3.33 |
95 | 96 | 2.542205 | GGTCAGTACCGTTGCCAAAAAC | 60.542 | 50.000 | 0.00 | 0.00 | 35.62 | 2.43 |
96 | 97 | 1.677052 | GGTCAGTACCGTTGCCAAAAA | 59.323 | 47.619 | 0.00 | 0.00 | 35.62 | 1.94 |
97 | 98 | 1.310904 | GGTCAGTACCGTTGCCAAAA | 58.689 | 50.000 | 0.00 | 0.00 | 35.62 | 2.44 |
98 | 99 | 3.009612 | GGTCAGTACCGTTGCCAAA | 57.990 | 52.632 | 0.00 | 0.00 | 35.62 | 3.28 |
99 | 100 | 4.783667 | GGTCAGTACCGTTGCCAA | 57.216 | 55.556 | 0.00 | 0.00 | 35.62 | 4.52 |
107 | 108 | 3.195661 | GGATCATTGAACGGTCAGTACC | 58.804 | 50.000 | 2.09 | 1.83 | 42.95 | 3.34 |
108 | 109 | 3.857052 | TGGATCATTGAACGGTCAGTAC | 58.143 | 45.455 | 2.09 | 0.00 | 34.49 | 2.73 |
109 | 110 | 3.118775 | CCTGGATCATTGAACGGTCAGTA | 60.119 | 47.826 | 2.09 | 0.00 | 34.49 | 2.74 |
110 | 111 | 2.355108 | CCTGGATCATTGAACGGTCAGT | 60.355 | 50.000 | 2.09 | 0.00 | 34.49 | 3.41 |
111 | 112 | 2.283298 | CCTGGATCATTGAACGGTCAG | 58.717 | 52.381 | 2.09 | 0.00 | 34.49 | 3.51 |
112 | 113 | 1.065491 | CCCTGGATCATTGAACGGTCA | 60.065 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
113 | 114 | 1.065418 | ACCCTGGATCATTGAACGGTC | 60.065 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
114 | 115 | 0.991920 | ACCCTGGATCATTGAACGGT | 59.008 | 50.000 | 0.00 | 0.00 | 0.00 | 4.83 |
115 | 116 | 1.382522 | CACCCTGGATCATTGAACGG | 58.617 | 55.000 | 0.00 | 0.00 | 0.00 | 4.44 |
116 | 117 | 1.340017 | ACCACCCTGGATCATTGAACG | 60.340 | 52.381 | 0.00 | 0.00 | 40.96 | 3.95 |
117 | 118 | 2.094675 | CACCACCCTGGATCATTGAAC | 58.905 | 52.381 | 0.00 | 0.00 | 40.96 | 3.18 |
118 | 119 | 1.710244 | ACACCACCCTGGATCATTGAA | 59.290 | 47.619 | 0.00 | 0.00 | 40.96 | 2.69 |
119 | 120 | 1.371467 | ACACCACCCTGGATCATTGA | 58.629 | 50.000 | 0.00 | 0.00 | 40.96 | 2.57 |
120 | 121 | 3.582998 | ATACACCACCCTGGATCATTG | 57.417 | 47.619 | 0.00 | 0.00 | 40.96 | 2.82 |
121 | 122 | 4.608170 | AAATACACCACCCTGGATCATT | 57.392 | 40.909 | 0.00 | 0.00 | 40.96 | 2.57 |
122 | 123 | 4.608170 | AAAATACACCACCCTGGATCAT | 57.392 | 40.909 | 0.00 | 0.00 | 40.96 | 2.45 |
123 | 124 | 4.396357 | AAAAATACACCACCCTGGATCA | 57.604 | 40.909 | 0.00 | 0.00 | 40.96 | 2.92 |
147 | 148 | 8.667463 | GCGTACAAAGAAACCCTAACATAATAA | 58.333 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
148 | 149 | 7.280652 | GGCGTACAAAGAAACCCTAACATAATA | 59.719 | 37.037 | 0.00 | 0.00 | 0.00 | 0.98 |
149 | 150 | 6.094464 | GGCGTACAAAGAAACCCTAACATAAT | 59.906 | 38.462 | 0.00 | 0.00 | 0.00 | 1.28 |
150 | 151 | 5.412286 | GGCGTACAAAGAAACCCTAACATAA | 59.588 | 40.000 | 0.00 | 0.00 | 0.00 | 1.90 |
151 | 152 | 4.937015 | GGCGTACAAAGAAACCCTAACATA | 59.063 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
152 | 153 | 3.754850 | GGCGTACAAAGAAACCCTAACAT | 59.245 | 43.478 | 0.00 | 0.00 | 0.00 | 2.71 |
153 | 154 | 3.140623 | GGCGTACAAAGAAACCCTAACA | 58.859 | 45.455 | 0.00 | 0.00 | 0.00 | 2.41 |
154 | 155 | 2.485426 | GGGCGTACAAAGAAACCCTAAC | 59.515 | 50.000 | 0.00 | 0.00 | 34.34 | 2.34 |
155 | 156 | 2.781923 | GGGCGTACAAAGAAACCCTAA | 58.218 | 47.619 | 0.00 | 0.00 | 34.34 | 2.69 |
156 | 157 | 1.338011 | CGGGCGTACAAAGAAACCCTA | 60.338 | 52.381 | 0.00 | 0.00 | 35.05 | 3.53 |
157 | 158 | 0.604511 | CGGGCGTACAAAGAAACCCT | 60.605 | 55.000 | 0.00 | 0.00 | 35.05 | 4.34 |
158 | 159 | 1.871077 | CGGGCGTACAAAGAAACCC | 59.129 | 57.895 | 0.00 | 0.00 | 0.00 | 4.11 |
159 | 160 | 1.208358 | GCGGGCGTACAAAGAAACC | 59.792 | 57.895 | 0.00 | 0.00 | 0.00 | 3.27 |
160 | 161 | 0.110373 | CAGCGGGCGTACAAAGAAAC | 60.110 | 55.000 | 0.00 | 0.00 | 0.00 | 2.78 |
161 | 162 | 0.249953 | TCAGCGGGCGTACAAAGAAA | 60.250 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
162 | 163 | 0.249953 | TTCAGCGGGCGTACAAAGAA | 60.250 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
163 | 164 | 0.947180 | GTTCAGCGGGCGTACAAAGA | 60.947 | 55.000 | 0.00 | 0.00 | 0.00 | 2.52 |
164 | 165 | 0.949105 | AGTTCAGCGGGCGTACAAAG | 60.949 | 55.000 | 0.00 | 0.00 | 0.00 | 2.77 |
165 | 166 | 0.533308 | AAGTTCAGCGGGCGTACAAA | 60.533 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
166 | 167 | 0.533308 | AAAGTTCAGCGGGCGTACAA | 60.533 | 50.000 | 0.00 | 0.00 | 0.00 | 2.41 |
167 | 168 | 0.533308 | AAAAGTTCAGCGGGCGTACA | 60.533 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
168 | 169 | 1.431496 | TAAAAGTTCAGCGGGCGTAC | 58.569 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
169 | 170 | 2.389962 | ATAAAAGTTCAGCGGGCGTA | 57.610 | 45.000 | 0.00 | 0.00 | 0.00 | 4.42 |
170 | 171 | 2.004733 | GTATAAAAGTTCAGCGGGCGT | 58.995 | 47.619 | 0.00 | 0.00 | 0.00 | 5.68 |
171 | 172 | 2.277084 | AGTATAAAAGTTCAGCGGGCG | 58.723 | 47.619 | 0.00 | 0.00 | 0.00 | 6.13 |
172 | 173 | 3.309954 | CAGAGTATAAAAGTTCAGCGGGC | 59.690 | 47.826 | 0.00 | 0.00 | 0.00 | 6.13 |
173 | 174 | 4.504858 | ACAGAGTATAAAAGTTCAGCGGG | 58.495 | 43.478 | 0.00 | 0.00 | 0.00 | 6.13 |
174 | 175 | 6.331061 | ACTACAGAGTATAAAAGTTCAGCGG | 58.669 | 40.000 | 0.00 | 0.00 | 32.65 | 5.52 |
175 | 176 | 8.906636 | TTACTACAGAGTATAAAAGTTCAGCG | 57.093 | 34.615 | 0.00 | 0.00 | 37.99 | 5.18 |
188 | 189 | 8.824783 | GGACCCTAGATCTATTACTACAGAGTA | 58.175 | 40.741 | 2.11 | 0.00 | 37.10 | 2.59 |
189 | 190 | 7.518303 | AGGACCCTAGATCTATTACTACAGAGT | 59.482 | 40.741 | 2.11 | 0.00 | 39.92 | 3.24 |
190 | 191 | 7.827236 | CAGGACCCTAGATCTATTACTACAGAG | 59.173 | 44.444 | 2.11 | 0.00 | 0.00 | 3.35 |
191 | 192 | 7.516557 | TCAGGACCCTAGATCTATTACTACAGA | 59.483 | 40.741 | 2.11 | 0.00 | 0.00 | 3.41 |
192 | 193 | 7.691213 | TCAGGACCCTAGATCTATTACTACAG | 58.309 | 42.308 | 2.11 | 0.00 | 0.00 | 2.74 |
193 | 194 | 7.643612 | TCAGGACCCTAGATCTATTACTACA | 57.356 | 40.000 | 2.11 | 0.00 | 0.00 | 2.74 |
196 | 197 | 7.830201 | CGTTATCAGGACCCTAGATCTATTACT | 59.170 | 40.741 | 2.11 | 0.00 | 0.00 | 2.24 |
197 | 198 | 7.415429 | GCGTTATCAGGACCCTAGATCTATTAC | 60.415 | 44.444 | 2.11 | 0.00 | 0.00 | 1.89 |
198 | 199 | 6.602406 | GCGTTATCAGGACCCTAGATCTATTA | 59.398 | 42.308 | 2.11 | 0.00 | 0.00 | 0.98 |
199 | 200 | 5.419471 | GCGTTATCAGGACCCTAGATCTATT | 59.581 | 44.000 | 2.11 | 0.00 | 0.00 | 1.73 |
200 | 201 | 4.951094 | GCGTTATCAGGACCCTAGATCTAT | 59.049 | 45.833 | 2.11 | 0.00 | 0.00 | 1.98 |
201 | 202 | 4.333690 | GCGTTATCAGGACCCTAGATCTA | 58.666 | 47.826 | 1.69 | 1.69 | 0.00 | 1.98 |
202 | 203 | 3.158676 | GCGTTATCAGGACCCTAGATCT | 58.841 | 50.000 | 0.00 | 0.00 | 0.00 | 2.75 |
203 | 204 | 2.231721 | GGCGTTATCAGGACCCTAGATC | 59.768 | 54.545 | 0.00 | 0.00 | 0.00 | 2.75 |
204 | 205 | 2.249139 | GGCGTTATCAGGACCCTAGAT | 58.751 | 52.381 | 0.00 | 0.00 | 0.00 | 1.98 |
205 | 206 | 1.700955 | GGCGTTATCAGGACCCTAGA | 58.299 | 55.000 | 0.00 | 0.00 | 0.00 | 2.43 |
206 | 207 | 0.680061 | GGGCGTTATCAGGACCCTAG | 59.320 | 60.000 | 0.00 | 0.00 | 37.59 | 3.02 |
207 | 208 | 0.031917 | TGGGCGTTATCAGGACCCTA | 60.032 | 55.000 | 0.00 | 0.00 | 41.44 | 3.53 |
208 | 209 | 1.306654 | TGGGCGTTATCAGGACCCT | 60.307 | 57.895 | 0.00 | 0.00 | 41.44 | 4.34 |
215 | 216 | 0.946700 | CACACGTGTGGGCGTTATCA | 60.947 | 55.000 | 35.65 | 0.00 | 43.83 | 2.15 |
230 | 231 | 1.969589 | CACCCCTTAACGCCCACAC | 60.970 | 63.158 | 0.00 | 0.00 | 0.00 | 3.82 |
231 | 232 | 2.432563 | CACCCCTTAACGCCCACA | 59.567 | 61.111 | 0.00 | 0.00 | 0.00 | 4.17 |
232 | 233 | 1.969589 | CACACCCCTTAACGCCCAC | 60.970 | 63.158 | 0.00 | 0.00 | 0.00 | 4.61 |
233 | 234 | 2.432563 | CACACCCCTTAACGCCCA | 59.567 | 61.111 | 0.00 | 0.00 | 0.00 | 5.36 |
234 | 235 | 2.360726 | CCACACCCCTTAACGCCC | 60.361 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
235 | 236 | 2.360726 | CCCACACCCCTTAACGCC | 60.361 | 66.667 | 0.00 | 0.00 | 0.00 | 5.68 |
236 | 237 | 3.060000 | GCCCACACCCCTTAACGC | 61.060 | 66.667 | 0.00 | 0.00 | 0.00 | 4.84 |
237 | 238 | 2.744709 | CGCCCACACCCCTTAACG | 60.745 | 66.667 | 0.00 | 0.00 | 0.00 | 3.18 |
238 | 239 | 0.036590 | TAACGCCCACACCCCTTAAC | 59.963 | 55.000 | 0.00 | 0.00 | 0.00 | 2.01 |
239 | 240 | 0.769873 | TTAACGCCCACACCCCTTAA | 59.230 | 50.000 | 0.00 | 0.00 | 0.00 | 1.85 |
240 | 241 | 0.325602 | CTTAACGCCCACACCCCTTA | 59.674 | 55.000 | 0.00 | 0.00 | 0.00 | 2.69 |
241 | 242 | 1.074248 | CTTAACGCCCACACCCCTT | 59.926 | 57.895 | 0.00 | 0.00 | 0.00 | 3.95 |
242 | 243 | 2.754375 | CTTAACGCCCACACCCCT | 59.246 | 61.111 | 0.00 | 0.00 | 0.00 | 4.79 |
243 | 244 | 2.360726 | CCTTAACGCCCACACCCC | 60.361 | 66.667 | 0.00 | 0.00 | 0.00 | 4.95 |
244 | 245 | 2.360726 | CCCTTAACGCCCACACCC | 60.361 | 66.667 | 0.00 | 0.00 | 0.00 | 4.61 |
245 | 246 | 2.360726 | CCCCTTAACGCCCACACC | 60.361 | 66.667 | 0.00 | 0.00 | 0.00 | 4.16 |
279 | 280 | 4.080863 | GGACTGGTTCTCTTGATACCACAT | 60.081 | 45.833 | 0.00 | 0.00 | 37.04 | 3.21 |
567 | 593 | 3.418022 | TGCAGTTGAGCAACCATGA | 57.582 | 47.368 | 9.56 | 0.00 | 42.46 | 3.07 |
586 | 612 | 3.341823 | GCACTTGACCTGAGATGACAAT | 58.658 | 45.455 | 0.00 | 0.00 | 0.00 | 2.71 |
689 | 765 | 2.009774 | GTGCTACATGGCAACTACCTG | 58.990 | 52.381 | 0.00 | 0.00 | 44.18 | 4.00 |
722 | 800 | 2.094957 | ACCCGAACATGTTATTTTGCCG | 60.095 | 45.455 | 11.95 | 8.75 | 0.00 | 5.69 |
771 | 852 | 5.221106 | GCTATTTTCATCATGCTTGTAGCCA | 60.221 | 40.000 | 0.00 | 0.00 | 41.51 | 4.75 |
772 | 853 | 5.218139 | GCTATTTTCATCATGCTTGTAGCC | 58.782 | 41.667 | 0.00 | 0.00 | 41.51 | 3.93 |
773 | 854 | 5.218139 | GGCTATTTTCATCATGCTTGTAGC | 58.782 | 41.667 | 0.00 | 3.99 | 42.82 | 3.58 |
774 | 855 | 6.381481 | TGGCTATTTTCATCATGCTTGTAG | 57.619 | 37.500 | 0.00 | 0.00 | 0.00 | 2.74 |
775 | 856 | 6.377996 | AGTTGGCTATTTTCATCATGCTTGTA | 59.622 | 34.615 | 0.00 | 0.00 | 0.00 | 2.41 |
776 | 857 | 5.186409 | AGTTGGCTATTTTCATCATGCTTGT | 59.814 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
777 | 858 | 5.657474 | AGTTGGCTATTTTCATCATGCTTG | 58.343 | 37.500 | 0.00 | 0.00 | 0.00 | 4.01 |
778 | 859 | 5.927281 | AGTTGGCTATTTTCATCATGCTT | 57.073 | 34.783 | 0.00 | 0.00 | 0.00 | 3.91 |
779 | 860 | 5.927281 | AAGTTGGCTATTTTCATCATGCT | 57.073 | 34.783 | 0.00 | 0.00 | 0.00 | 3.79 |
780 | 861 | 6.698766 | CCTAAAGTTGGCTATTTTCATCATGC | 59.301 | 38.462 | 0.00 | 0.00 | 0.00 | 4.06 |
781 | 862 | 7.999679 | TCCTAAAGTTGGCTATTTTCATCATG | 58.000 | 34.615 | 0.00 | 0.00 | 0.00 | 3.07 |
782 | 863 | 7.836183 | ACTCCTAAAGTTGGCTATTTTCATCAT | 59.164 | 33.333 | 0.00 | 0.00 | 33.03 | 2.45 |
783 | 864 | 7.175104 | ACTCCTAAAGTTGGCTATTTTCATCA | 58.825 | 34.615 | 0.00 | 0.00 | 33.03 | 3.07 |
784 | 865 | 7.631717 | ACTCCTAAAGTTGGCTATTTTCATC | 57.368 | 36.000 | 0.00 | 0.00 | 33.03 | 2.92 |
805 | 886 | 3.679824 | AGTGTTAGTAGGTGGCAACTC | 57.320 | 47.619 | 9.14 | 0.35 | 37.61 | 3.01 |
806 | 887 | 3.514309 | CCTAGTGTTAGTAGGTGGCAACT | 59.486 | 47.826 | 11.18 | 11.18 | 36.69 | 3.16 |
807 | 888 | 3.858247 | CCTAGTGTTAGTAGGTGGCAAC | 58.142 | 50.000 | 0.00 | 0.00 | 36.69 | 4.17 |
808 | 889 | 2.235402 | GCCTAGTGTTAGTAGGTGGCAA | 59.765 | 50.000 | 10.53 | 0.00 | 42.16 | 4.52 |
809 | 890 | 1.829222 | GCCTAGTGTTAGTAGGTGGCA | 59.171 | 52.381 | 10.53 | 0.00 | 42.16 | 4.92 |
810 | 891 | 1.829222 | TGCCTAGTGTTAGTAGGTGGC | 59.171 | 52.381 | 10.53 | 0.00 | 42.16 | 5.01 |
811 | 892 | 3.097614 | ACTGCCTAGTGTTAGTAGGTGG | 58.902 | 50.000 | 10.53 | 6.92 | 42.16 | 4.61 |
812 | 893 | 4.803098 | AACTGCCTAGTGTTAGTAGGTG | 57.197 | 45.455 | 10.53 | 7.20 | 42.16 | 4.00 |
813 | 894 | 5.820404 | AAAACTGCCTAGTGTTAGTAGGT | 57.180 | 39.130 | 10.53 | 0.00 | 42.16 | 3.08 |
814 | 895 | 5.347907 | CGAAAAACTGCCTAGTGTTAGTAGG | 59.652 | 44.000 | 5.53 | 5.53 | 42.87 | 3.18 |
815 | 896 | 5.163982 | GCGAAAAACTGCCTAGTGTTAGTAG | 60.164 | 44.000 | 0.00 | 0.00 | 33.15 | 2.57 |
816 | 897 | 4.687483 | GCGAAAAACTGCCTAGTGTTAGTA | 59.313 | 41.667 | 0.00 | 0.00 | 33.15 | 1.82 |
817 | 898 | 3.497262 | GCGAAAAACTGCCTAGTGTTAGT | 59.503 | 43.478 | 0.00 | 0.00 | 33.15 | 2.24 |
818 | 899 | 3.746492 | AGCGAAAAACTGCCTAGTGTTAG | 59.254 | 43.478 | 0.00 | 0.00 | 33.15 | 2.34 |
819 | 900 | 3.735591 | AGCGAAAAACTGCCTAGTGTTA | 58.264 | 40.909 | 0.00 | 0.00 | 33.15 | 2.41 |
820 | 901 | 2.548480 | GAGCGAAAAACTGCCTAGTGTT | 59.452 | 45.455 | 0.00 | 0.00 | 35.87 | 3.32 |
821 | 902 | 2.143925 | GAGCGAAAAACTGCCTAGTGT | 58.856 | 47.619 | 0.00 | 0.00 | 37.19 | 3.55 |
822 | 903 | 2.096218 | GTGAGCGAAAAACTGCCTAGTG | 60.096 | 50.000 | 0.00 | 0.00 | 37.19 | 2.74 |
823 | 904 | 2.143925 | GTGAGCGAAAAACTGCCTAGT | 58.856 | 47.619 | 0.00 | 0.00 | 39.32 | 2.57 |
824 | 905 | 1.126846 | CGTGAGCGAAAAACTGCCTAG | 59.873 | 52.381 | 0.00 | 0.00 | 41.33 | 3.02 |
825 | 906 | 1.144969 | CGTGAGCGAAAAACTGCCTA | 58.855 | 50.000 | 0.00 | 0.00 | 41.33 | 3.93 |
826 | 907 | 1.941812 | CGTGAGCGAAAAACTGCCT | 59.058 | 52.632 | 0.00 | 0.00 | 41.33 | 4.75 |
827 | 908 | 4.515107 | CGTGAGCGAAAAACTGCC | 57.485 | 55.556 | 0.00 | 0.00 | 41.33 | 4.85 |
857 | 938 | 4.823989 | GCATAACATGAATTGGTCCTAGCT | 59.176 | 41.667 | 0.00 | 0.00 | 0.00 | 3.32 |
862 | 943 | 3.068590 | CCCTGCATAACATGAATTGGTCC | 59.931 | 47.826 | 0.00 | 0.00 | 0.00 | 4.46 |
1284 | 1385 | 0.183492 | GGCACATCAGCTTGGGGATA | 59.817 | 55.000 | 0.00 | 0.00 | 34.17 | 2.59 |
1395 | 1496 | 2.606213 | TCACGGAGGACCATGCCA | 60.606 | 61.111 | 0.00 | 0.00 | 35.59 | 4.92 |
2589 | 2709 | 3.315142 | GATGCCGAGCACCTGGTCA | 62.315 | 63.158 | 0.00 | 0.00 | 43.04 | 4.02 |
2643 | 2766 | 0.958822 | AAACGCACAATCCTTCCACC | 59.041 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
2753 | 2876 | 0.458025 | GAAGCGAGGTCACGGGTTAG | 60.458 | 60.000 | 0.00 | 0.00 | 0.00 | 2.34 |
2774 | 2897 | 1.401539 | GGTTGGTTGCGCAGAATCTTC | 60.402 | 52.381 | 11.31 | 0.00 | 0.00 | 2.87 |
2797 | 2920 | 0.881796 | AAGGCAGGAAAAACGCTAGC | 59.118 | 50.000 | 4.06 | 4.06 | 0.00 | 3.42 |
2805 | 2928 | 8.744568 | AAATCAAATAACAAAAGGCAGGAAAA | 57.255 | 26.923 | 0.00 | 0.00 | 0.00 | 2.29 |
2806 | 2929 | 7.170658 | CGAAATCAAATAACAAAAGGCAGGAAA | 59.829 | 33.333 | 0.00 | 0.00 | 0.00 | 3.13 |
2807 | 2930 | 6.644592 | CGAAATCAAATAACAAAAGGCAGGAA | 59.355 | 34.615 | 0.00 | 0.00 | 0.00 | 3.36 |
2808 | 2931 | 6.155827 | CGAAATCAAATAACAAAAGGCAGGA | 58.844 | 36.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2809 | 2932 | 5.163963 | GCGAAATCAAATAACAAAAGGCAGG | 60.164 | 40.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2810 | 2933 | 5.634859 | AGCGAAATCAAATAACAAAAGGCAG | 59.365 | 36.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2811 | 2934 | 5.537188 | AGCGAAATCAAATAACAAAAGGCA | 58.463 | 33.333 | 0.00 | 0.00 | 0.00 | 4.75 |
2812 | 2935 | 6.466308 | AAGCGAAATCAAATAACAAAAGGC | 57.534 | 33.333 | 0.00 | 0.00 | 0.00 | 4.35 |
2821 | 2944 | 9.778741 | AGTCCTCATAATAAGCGAAATCAAATA | 57.221 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
2822 | 2945 | 8.682936 | AGTCCTCATAATAAGCGAAATCAAAT | 57.317 | 30.769 | 0.00 | 0.00 | 0.00 | 2.32 |
2823 | 2946 | 9.261180 | CTAGTCCTCATAATAAGCGAAATCAAA | 57.739 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
2824 | 2947 | 8.421784 | ACTAGTCCTCATAATAAGCGAAATCAA | 58.578 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
2825 | 2948 | 7.952671 | ACTAGTCCTCATAATAAGCGAAATCA | 58.047 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
2826 | 2949 | 9.562583 | CTACTAGTCCTCATAATAAGCGAAATC | 57.437 | 37.037 | 0.00 | 0.00 | 0.00 | 2.17 |
2827 | 2950 | 9.298250 | TCTACTAGTCCTCATAATAAGCGAAAT | 57.702 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
2828 | 2951 | 8.687292 | TCTACTAGTCCTCATAATAAGCGAAA | 57.313 | 34.615 | 0.00 | 0.00 | 0.00 | 3.46 |
2829 | 2952 | 8.566260 | GTTCTACTAGTCCTCATAATAAGCGAA | 58.434 | 37.037 | 0.00 | 0.00 | 0.00 | 4.70 |
2830 | 2953 | 7.095313 | CGTTCTACTAGTCCTCATAATAAGCGA | 60.095 | 40.741 | 0.00 | 0.00 | 0.00 | 4.93 |
2831 | 2954 | 7.016466 | CGTTCTACTAGTCCTCATAATAAGCG | 58.984 | 42.308 | 0.00 | 0.00 | 0.00 | 4.68 |
2832 | 2955 | 6.802834 | GCGTTCTACTAGTCCTCATAATAAGC | 59.197 | 42.308 | 0.00 | 0.00 | 0.00 | 3.09 |
2833 | 2956 | 7.306953 | GGCGTTCTACTAGTCCTCATAATAAG | 58.693 | 42.308 | 0.00 | 0.00 | 0.00 | 1.73 |
2834 | 2957 | 6.208204 | GGGCGTTCTACTAGTCCTCATAATAA | 59.792 | 42.308 | 0.00 | 0.00 | 0.00 | 1.40 |
2835 | 2958 | 5.709164 | GGGCGTTCTACTAGTCCTCATAATA | 59.291 | 44.000 | 0.00 | 0.00 | 0.00 | 0.98 |
2836 | 2959 | 4.523558 | GGGCGTTCTACTAGTCCTCATAAT | 59.476 | 45.833 | 0.00 | 0.00 | 0.00 | 1.28 |
2837 | 2960 | 3.887716 | GGGCGTTCTACTAGTCCTCATAA | 59.112 | 47.826 | 0.00 | 0.00 | 0.00 | 1.90 |
2838 | 2961 | 3.484407 | GGGCGTTCTACTAGTCCTCATA | 58.516 | 50.000 | 0.00 | 0.00 | 0.00 | 2.15 |
2839 | 2962 | 2.308690 | GGGCGTTCTACTAGTCCTCAT | 58.691 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
2840 | 2963 | 1.760192 | GGGCGTTCTACTAGTCCTCA | 58.240 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2841 | 2964 | 0.662085 | CGGGCGTTCTACTAGTCCTC | 59.338 | 60.000 | 0.00 | 0.00 | 0.00 | 3.71 |
2842 | 2965 | 0.034670 | ACGGGCGTTCTACTAGTCCT | 60.035 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2843 | 2966 | 0.100146 | CACGGGCGTTCTACTAGTCC | 59.900 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3274 | 3400 | 6.585322 | GCTATGCTCATCTCAAATTTTATGCC | 59.415 | 38.462 | 0.00 | 0.00 | 0.00 | 4.40 |
3312 | 3438 | 1.649321 | TCTCTGACATGGAGGCAAGT | 58.351 | 50.000 | 0.00 | 0.00 | 32.28 | 3.16 |
3475 | 3602 | 1.965930 | GATGGTGAACACGGCAGCA | 60.966 | 57.895 | 0.00 | 0.00 | 46.25 | 4.41 |
3494 | 3621 | 5.550290 | TCTGATTGTATGCACTGAACTTCA | 58.450 | 37.500 | 0.00 | 0.00 | 0.00 | 3.02 |
3495 | 3622 | 5.064452 | CCTCTGATTGTATGCACTGAACTTC | 59.936 | 44.000 | 0.00 | 0.00 | 0.00 | 3.01 |
3496 | 3623 | 4.940046 | CCTCTGATTGTATGCACTGAACTT | 59.060 | 41.667 | 0.00 | 0.00 | 0.00 | 2.66 |
3497 | 3624 | 4.511527 | CCTCTGATTGTATGCACTGAACT | 58.488 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
3498 | 3625 | 3.064545 | GCCTCTGATTGTATGCACTGAAC | 59.935 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
3499 | 3626 | 3.273434 | GCCTCTGATTGTATGCACTGAA | 58.727 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
3500 | 3627 | 2.236893 | TGCCTCTGATTGTATGCACTGA | 59.763 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
3501 | 3628 | 2.635714 | TGCCTCTGATTGTATGCACTG | 58.364 | 47.619 | 0.00 | 0.00 | 0.00 | 3.66 |
3502 | 3629 | 3.211865 | CATGCCTCTGATTGTATGCACT | 58.788 | 45.455 | 0.00 | 0.00 | 0.00 | 4.40 |
3503 | 3630 | 2.947652 | ACATGCCTCTGATTGTATGCAC | 59.052 | 45.455 | 0.00 | 0.00 | 0.00 | 4.57 |
3504 | 3631 | 3.286329 | ACATGCCTCTGATTGTATGCA | 57.714 | 42.857 | 0.00 | 0.00 | 0.00 | 3.96 |
3505 | 3632 | 4.023707 | GGTAACATGCCTCTGATTGTATGC | 60.024 | 45.833 | 0.00 | 0.00 | 0.00 | 3.14 |
3506 | 3633 | 5.371526 | AGGTAACATGCCTCTGATTGTATG | 58.628 | 41.667 | 0.00 | 4.61 | 41.41 | 2.39 |
3507 | 3634 | 5.615289 | GAGGTAACATGCCTCTGATTGTAT | 58.385 | 41.667 | 9.85 | 0.00 | 46.71 | 2.29 |
3508 | 3635 | 5.023533 | GAGGTAACATGCCTCTGATTGTA | 57.976 | 43.478 | 9.85 | 0.00 | 46.71 | 2.41 |
3509 | 3636 | 3.878778 | GAGGTAACATGCCTCTGATTGT | 58.121 | 45.455 | 9.85 | 0.00 | 46.71 | 2.71 |
3517 | 3644 | 3.372025 | GGATTTCTGGAGGTAACATGCCT | 60.372 | 47.826 | 0.00 | 0.00 | 39.42 | 4.75 |
3518 | 3645 | 2.952310 | GGATTTCTGGAGGTAACATGCC | 59.048 | 50.000 | 0.00 | 0.00 | 41.41 | 4.40 |
3519 | 3646 | 2.952310 | GGGATTTCTGGAGGTAACATGC | 59.048 | 50.000 | 0.00 | 0.00 | 41.41 | 4.06 |
3520 | 3647 | 4.510167 | AGGGATTTCTGGAGGTAACATG | 57.490 | 45.455 | 0.00 | 0.00 | 41.41 | 3.21 |
3521 | 3648 | 5.911178 | TGATAGGGATTTCTGGAGGTAACAT | 59.089 | 40.000 | 0.00 | 0.00 | 41.41 | 2.71 |
3522 | 3649 | 5.285401 | TGATAGGGATTTCTGGAGGTAACA | 58.715 | 41.667 | 0.00 | 0.00 | 41.41 | 2.41 |
3523 | 3650 | 5.888982 | TGATAGGGATTTCTGGAGGTAAC | 57.111 | 43.478 | 0.00 | 0.00 | 0.00 | 2.50 |
3524 | 3651 | 6.901615 | TTTGATAGGGATTTCTGGAGGTAA | 57.098 | 37.500 | 0.00 | 0.00 | 0.00 | 2.85 |
3525 | 3652 | 6.676632 | TCTTTTGATAGGGATTTCTGGAGGTA | 59.323 | 38.462 | 0.00 | 0.00 | 0.00 | 3.08 |
3526 | 3653 | 5.492524 | TCTTTTGATAGGGATTTCTGGAGGT | 59.507 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3527 | 3654 | 5.825151 | GTCTTTTGATAGGGATTTCTGGAGG | 59.175 | 44.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3528 | 3655 | 6.418101 | TGTCTTTTGATAGGGATTTCTGGAG | 58.582 | 40.000 | 0.00 | 0.00 | 0.00 | 3.86 |
3529 | 3656 | 6.012508 | ACTGTCTTTTGATAGGGATTTCTGGA | 60.013 | 38.462 | 0.00 | 0.00 | 41.27 | 3.86 |
3530 | 3657 | 6.094603 | CACTGTCTTTTGATAGGGATTTCTGG | 59.905 | 42.308 | 0.00 | 0.00 | 42.79 | 3.86 |
3531 | 3658 | 6.094603 | CCACTGTCTTTTGATAGGGATTTCTG | 59.905 | 42.308 | 0.00 | 0.00 | 42.79 | 3.02 |
3532 | 3659 | 6.183347 | CCACTGTCTTTTGATAGGGATTTCT | 58.817 | 40.000 | 0.00 | 0.00 | 42.79 | 2.52 |
3533 | 3660 | 5.946377 | ACCACTGTCTTTTGATAGGGATTTC | 59.054 | 40.000 | 0.00 | 0.00 | 42.79 | 2.17 |
3534 | 3661 | 5.892348 | ACCACTGTCTTTTGATAGGGATTT | 58.108 | 37.500 | 0.00 | 0.00 | 42.79 | 2.17 |
3535 | 3662 | 5.520748 | ACCACTGTCTTTTGATAGGGATT | 57.479 | 39.130 | 0.00 | 0.00 | 42.79 | 3.01 |
3536 | 3663 | 5.520748 | AACCACTGTCTTTTGATAGGGAT | 57.479 | 39.130 | 0.00 | 0.00 | 42.79 | 3.85 |
3537 | 3664 | 4.993705 | AACCACTGTCTTTTGATAGGGA | 57.006 | 40.909 | 0.00 | 0.00 | 42.79 | 4.20 |
3538 | 3665 | 6.238648 | AGTAAACCACTGTCTTTTGATAGGG | 58.761 | 40.000 | 0.00 | 0.00 | 41.27 | 3.53 |
3539 | 3666 | 7.094762 | GGAAGTAAACCACTGTCTTTTGATAGG | 60.095 | 40.741 | 0.00 | 0.00 | 41.27 | 2.57 |
3540 | 3667 | 7.094762 | GGGAAGTAAACCACTGTCTTTTGATAG | 60.095 | 40.741 | 0.00 | 0.00 | 42.45 | 2.08 |
3541 | 3668 | 6.713450 | GGGAAGTAAACCACTGTCTTTTGATA | 59.287 | 38.462 | 0.00 | 0.00 | 37.63 | 2.15 |
3542 | 3669 | 5.535030 | GGGAAGTAAACCACTGTCTTTTGAT | 59.465 | 40.000 | 0.00 | 0.00 | 37.63 | 2.57 |
3543 | 3670 | 4.885325 | GGGAAGTAAACCACTGTCTTTTGA | 59.115 | 41.667 | 0.00 | 0.00 | 37.63 | 2.69 |
3544 | 3671 | 4.887655 | AGGGAAGTAAACCACTGTCTTTTG | 59.112 | 41.667 | 0.00 | 0.00 | 37.63 | 2.44 |
3545 | 3672 | 4.887655 | CAGGGAAGTAAACCACTGTCTTTT | 59.112 | 41.667 | 0.00 | 0.00 | 37.63 | 2.27 |
3546 | 3673 | 4.461198 | CAGGGAAGTAAACCACTGTCTTT | 58.539 | 43.478 | 0.00 | 0.00 | 37.63 | 2.52 |
3547 | 3674 | 3.747708 | GCAGGGAAGTAAACCACTGTCTT | 60.748 | 47.826 | 0.00 | 0.00 | 37.63 | 3.01 |
3548 | 3675 | 2.224548 | GCAGGGAAGTAAACCACTGTCT | 60.225 | 50.000 | 0.00 | 0.00 | 37.63 | 3.41 |
3549 | 3676 | 2.152016 | GCAGGGAAGTAAACCACTGTC | 58.848 | 52.381 | 0.00 | 0.00 | 37.63 | 3.51 |
3550 | 3677 | 1.493022 | TGCAGGGAAGTAAACCACTGT | 59.507 | 47.619 | 0.00 | 0.00 | 37.63 | 3.55 |
3551 | 3678 | 2.270352 | TGCAGGGAAGTAAACCACTG | 57.730 | 50.000 | 0.00 | 0.00 | 37.63 | 3.66 |
3552 | 3679 | 3.525800 | AATGCAGGGAAGTAAACCACT | 57.474 | 42.857 | 0.00 | 0.00 | 40.05 | 4.00 |
3553 | 3680 | 4.076394 | TGTAATGCAGGGAAGTAAACCAC | 58.924 | 43.478 | 0.00 | 0.00 | 0.00 | 4.16 |
3554 | 3681 | 4.374689 | TGTAATGCAGGGAAGTAAACCA | 57.625 | 40.909 | 0.00 | 0.00 | 0.00 | 3.67 |
3555 | 3682 | 5.914898 | AATGTAATGCAGGGAAGTAAACC | 57.085 | 39.130 | 0.00 | 0.00 | 0.00 | 3.27 |
3556 | 3683 | 5.576774 | GCAAATGTAATGCAGGGAAGTAAAC | 59.423 | 40.000 | 0.00 | 0.00 | 43.29 | 2.01 |
3557 | 3684 | 5.337169 | GGCAAATGTAATGCAGGGAAGTAAA | 60.337 | 40.000 | 0.00 | 0.00 | 45.60 | 2.01 |
3558 | 3685 | 4.159506 | GGCAAATGTAATGCAGGGAAGTAA | 59.840 | 41.667 | 0.00 | 0.00 | 45.60 | 2.24 |
3559 | 3686 | 3.699038 | GGCAAATGTAATGCAGGGAAGTA | 59.301 | 43.478 | 0.00 | 0.00 | 45.60 | 2.24 |
3560 | 3687 | 2.497273 | GGCAAATGTAATGCAGGGAAGT | 59.503 | 45.455 | 0.00 | 0.00 | 45.60 | 3.01 |
3561 | 3688 | 2.496871 | TGGCAAATGTAATGCAGGGAAG | 59.503 | 45.455 | 0.00 | 0.00 | 45.60 | 3.46 |
3562 | 3689 | 2.533916 | TGGCAAATGTAATGCAGGGAA | 58.466 | 42.857 | 0.00 | 0.00 | 45.60 | 3.97 |
3563 | 3690 | 2.228545 | TGGCAAATGTAATGCAGGGA | 57.771 | 45.000 | 0.00 | 0.00 | 45.60 | 4.20 |
3564 | 3691 | 3.331478 | TTTGGCAAATGTAATGCAGGG | 57.669 | 42.857 | 8.93 | 0.00 | 45.60 | 4.45 |
3565 | 3692 | 4.567971 | TCTTTTGGCAAATGTAATGCAGG | 58.432 | 39.130 | 20.96 | 0.00 | 45.60 | 4.85 |
3566 | 3693 | 7.037438 | AGTATCTTTTGGCAAATGTAATGCAG | 58.963 | 34.615 | 20.96 | 10.69 | 45.60 | 4.41 |
3567 | 3694 | 6.934056 | AGTATCTTTTGGCAAATGTAATGCA | 58.066 | 32.000 | 20.96 | 0.00 | 45.60 | 3.96 |
3568 | 3695 | 8.925161 | TTAGTATCTTTTGGCAAATGTAATGC | 57.075 | 30.769 | 20.96 | 13.57 | 43.08 | 3.56 |
3569 | 3696 | 9.023967 | GCTTAGTATCTTTTGGCAAATGTAATG | 57.976 | 33.333 | 20.96 | 10.22 | 0.00 | 1.90 |
3570 | 3697 | 8.748412 | TGCTTAGTATCTTTTGGCAAATGTAAT | 58.252 | 29.630 | 20.96 | 15.02 | 0.00 | 1.89 |
3571 | 3698 | 8.116651 | TGCTTAGTATCTTTTGGCAAATGTAA | 57.883 | 30.769 | 20.96 | 13.09 | 0.00 | 2.41 |
3572 | 3699 | 7.695480 | TGCTTAGTATCTTTTGGCAAATGTA | 57.305 | 32.000 | 20.96 | 12.33 | 0.00 | 2.29 |
3573 | 3700 | 6.588719 | TGCTTAGTATCTTTTGGCAAATGT | 57.411 | 33.333 | 20.96 | 13.10 | 0.00 | 2.71 |
3574 | 3701 | 9.023967 | GTTATGCTTAGTATCTTTTGGCAAATG | 57.976 | 33.333 | 14.29 | 15.95 | 0.00 | 2.32 |
3575 | 3702 | 8.748412 | TGTTATGCTTAGTATCTTTTGGCAAAT | 58.252 | 29.630 | 14.29 | 1.33 | 0.00 | 2.32 |
3576 | 3703 | 8.116651 | TGTTATGCTTAGTATCTTTTGGCAAA | 57.883 | 30.769 | 8.93 | 8.93 | 0.00 | 3.68 |
3577 | 3704 | 7.695480 | TGTTATGCTTAGTATCTTTTGGCAA | 57.305 | 32.000 | 0.00 | 0.00 | 0.00 | 4.52 |
3578 | 3705 | 7.880160 | ATGTTATGCTTAGTATCTTTTGGCA | 57.120 | 32.000 | 0.00 | 0.00 | 0.00 | 4.92 |
3583 | 3710 | 9.914834 | TGGGTTAATGTTATGCTTAGTATCTTT | 57.085 | 29.630 | 0.00 | 0.00 | 0.00 | 2.52 |
3589 | 3716 | 9.695155 | ACTAAATGGGTTAATGTTATGCTTAGT | 57.305 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
3592 | 3719 | 8.811994 | ACAACTAAATGGGTTAATGTTATGCTT | 58.188 | 29.630 | 0.00 | 0.00 | 0.00 | 3.91 |
3593 | 3720 | 8.361169 | ACAACTAAATGGGTTAATGTTATGCT | 57.639 | 30.769 | 0.00 | 0.00 | 0.00 | 3.79 |
3594 | 3721 | 8.466798 | AGACAACTAAATGGGTTAATGTTATGC | 58.533 | 33.333 | 0.00 | 0.00 | 0.00 | 3.14 |
3598 | 3725 | 9.975218 | ATCTAGACAACTAAATGGGTTAATGTT | 57.025 | 29.630 | 0.00 | 0.00 | 0.00 | 2.71 |
3602 | 3729 | 9.895138 | GGTTATCTAGACAACTAAATGGGTTAA | 57.105 | 33.333 | 13.37 | 0.00 | 0.00 | 2.01 |
3603 | 3730 | 9.049050 | TGGTTATCTAGACAACTAAATGGGTTA | 57.951 | 33.333 | 13.37 | 0.00 | 0.00 | 2.85 |
3604 | 3731 | 7.924541 | TGGTTATCTAGACAACTAAATGGGTT | 58.075 | 34.615 | 13.37 | 0.00 | 0.00 | 4.11 |
3605 | 3732 | 7.402071 | TCTGGTTATCTAGACAACTAAATGGGT | 59.598 | 37.037 | 13.37 | 0.00 | 0.00 | 4.51 |
3606 | 3733 | 7.792032 | TCTGGTTATCTAGACAACTAAATGGG | 58.208 | 38.462 | 13.37 | 0.00 | 0.00 | 4.00 |
3607 | 3734 | 9.838339 | AATCTGGTTATCTAGACAACTAAATGG | 57.162 | 33.333 | 13.37 | 0.00 | 34.17 | 3.16 |
3627 | 3754 | 9.850628 | CCATGTAATGCTTATGATTTAATCTGG | 57.149 | 33.333 | 6.50 | 0.00 | 44.97 | 3.86 |
3640 | 3767 | 9.461312 | ACTGAAATAAGAACCATGTAATGCTTA | 57.539 | 29.630 | 0.00 | 0.00 | 44.97 | 3.09 |
3641 | 3768 | 8.246180 | CACTGAAATAAGAACCATGTAATGCTT | 58.754 | 33.333 | 0.00 | 0.00 | 44.97 | 3.91 |
3642 | 3769 | 7.611467 | TCACTGAAATAAGAACCATGTAATGCT | 59.389 | 33.333 | 0.00 | 0.00 | 44.97 | 3.79 |
3643 | 3770 | 7.761409 | TCACTGAAATAAGAACCATGTAATGC | 58.239 | 34.615 | 0.00 | 0.00 | 44.97 | 3.56 |
3647 | 3774 | 8.792633 | CCTTTTCACTGAAATAAGAACCATGTA | 58.207 | 33.333 | 5.03 | 0.00 | 31.34 | 2.29 |
3648 | 3775 | 7.505585 | TCCTTTTCACTGAAATAAGAACCATGT | 59.494 | 33.333 | 5.03 | 0.00 | 31.34 | 3.21 |
3649 | 3776 | 7.885297 | TCCTTTTCACTGAAATAAGAACCATG | 58.115 | 34.615 | 5.03 | 0.00 | 31.34 | 3.66 |
3650 | 3777 | 8.477419 | TTCCTTTTCACTGAAATAAGAACCAT | 57.523 | 30.769 | 5.03 | 0.00 | 31.34 | 3.55 |
3651 | 3778 | 7.889873 | TTCCTTTTCACTGAAATAAGAACCA | 57.110 | 32.000 | 5.03 | 0.00 | 31.34 | 3.67 |
3652 | 3779 | 9.841880 | GTATTCCTTTTCACTGAAATAAGAACC | 57.158 | 33.333 | 5.03 | 1.71 | 31.34 | 3.62 |
3653 | 3780 | 9.841880 | GGTATTCCTTTTCACTGAAATAAGAAC | 57.158 | 33.333 | 5.03 | 0.00 | 31.34 | 3.01 |
3654 | 3781 | 8.726988 | CGGTATTCCTTTTCACTGAAATAAGAA | 58.273 | 33.333 | 5.03 | 8.78 | 31.34 | 2.52 |
3655 | 3782 | 7.881232 | ACGGTATTCCTTTTCACTGAAATAAGA | 59.119 | 33.333 | 5.03 | 0.82 | 31.34 | 2.10 |
3656 | 3783 | 8.040716 | ACGGTATTCCTTTTCACTGAAATAAG | 57.959 | 34.615 | 5.03 | 1.30 | 31.34 | 1.73 |
3657 | 3784 | 7.989416 | ACGGTATTCCTTTTCACTGAAATAA | 57.011 | 32.000 | 5.03 | 1.95 | 31.34 | 1.40 |
3658 | 3785 | 7.662258 | TCAACGGTATTCCTTTTCACTGAAATA | 59.338 | 33.333 | 5.03 | 0.00 | 31.34 | 1.40 |
3659 | 3786 | 6.488683 | TCAACGGTATTCCTTTTCACTGAAAT | 59.511 | 34.615 | 5.03 | 0.00 | 31.34 | 2.17 |
3660 | 3787 | 5.823570 | TCAACGGTATTCCTTTTCACTGAAA | 59.176 | 36.000 | 0.00 | 0.00 | 0.00 | 2.69 |
3661 | 3788 | 5.369833 | TCAACGGTATTCCTTTTCACTGAA | 58.630 | 37.500 | 0.00 | 0.00 | 0.00 | 3.02 |
3662 | 3789 | 4.963373 | TCAACGGTATTCCTTTTCACTGA | 58.037 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
3663 | 3790 | 5.682943 | TTCAACGGTATTCCTTTTCACTG | 57.317 | 39.130 | 0.00 | 0.00 | 0.00 | 3.66 |
3664 | 3791 | 7.989416 | TTATTCAACGGTATTCCTTTTCACT | 57.011 | 32.000 | 0.00 | 0.00 | 0.00 | 3.41 |
3665 | 3792 | 8.455682 | TCATTATTCAACGGTATTCCTTTTCAC | 58.544 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
3666 | 3793 | 8.568676 | TCATTATTCAACGGTATTCCTTTTCA | 57.431 | 30.769 | 0.00 | 0.00 | 0.00 | 2.69 |
3670 | 3797 | 9.063615 | GGTAATCATTATTCAACGGTATTCCTT | 57.936 | 33.333 | 0.00 | 0.00 | 0.00 | 3.36 |
3671 | 3798 | 8.215050 | TGGTAATCATTATTCAACGGTATTCCT | 58.785 | 33.333 | 0.00 | 0.00 | 0.00 | 3.36 |
3672 | 3799 | 8.385898 | TGGTAATCATTATTCAACGGTATTCC | 57.614 | 34.615 | 0.00 | 0.00 | 0.00 | 3.01 |
3675 | 3802 | 8.296713 | GCATTGGTAATCATTATTCAACGGTAT | 58.703 | 33.333 | 0.00 | 0.00 | 0.00 | 2.73 |
3676 | 3803 | 7.283354 | TGCATTGGTAATCATTATTCAACGGTA | 59.717 | 33.333 | 0.00 | 0.00 | 0.00 | 4.02 |
3677 | 3804 | 6.096141 | TGCATTGGTAATCATTATTCAACGGT | 59.904 | 34.615 | 0.00 | 0.00 | 0.00 | 4.83 |
3678 | 3805 | 6.502652 | TGCATTGGTAATCATTATTCAACGG | 58.497 | 36.000 | 0.00 | 0.00 | 0.00 | 4.44 |
3679 | 3806 | 7.648908 | ACATGCATTGGTAATCATTATTCAACG | 59.351 | 33.333 | 0.00 | 0.00 | 0.00 | 4.10 |
3680 | 3807 | 8.876275 | ACATGCATTGGTAATCATTATTCAAC | 57.124 | 30.769 | 0.00 | 0.00 | 0.00 | 3.18 |
3681 | 3808 | 8.693625 | TGACATGCATTGGTAATCATTATTCAA | 58.306 | 29.630 | 0.00 | 0.51 | 0.00 | 2.69 |
3682 | 3809 | 8.235359 | TGACATGCATTGGTAATCATTATTCA | 57.765 | 30.769 | 0.00 | 0.00 | 0.00 | 2.57 |
3683 | 3810 | 7.327761 | GCTGACATGCATTGGTAATCATTATTC | 59.672 | 37.037 | 0.00 | 0.00 | 0.00 | 1.75 |
3684 | 3811 | 7.149973 | GCTGACATGCATTGGTAATCATTATT | 58.850 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
3685 | 3812 | 6.265876 | TGCTGACATGCATTGGTAATCATTAT | 59.734 | 34.615 | 0.00 | 0.00 | 38.12 | 1.28 |
3686 | 3813 | 5.593502 | TGCTGACATGCATTGGTAATCATTA | 59.406 | 36.000 | 0.00 | 0.00 | 38.12 | 1.90 |
3687 | 3814 | 4.403113 | TGCTGACATGCATTGGTAATCATT | 59.597 | 37.500 | 0.00 | 0.00 | 38.12 | 2.57 |
3688 | 3815 | 3.955551 | TGCTGACATGCATTGGTAATCAT | 59.044 | 39.130 | 0.00 | 0.00 | 38.12 | 2.45 |
3689 | 3816 | 3.354467 | TGCTGACATGCATTGGTAATCA | 58.646 | 40.909 | 0.00 | 0.00 | 38.12 | 2.57 |
3702 | 3829 | 6.270815 | GTTTCTGAATTATGCATGCTGACAT | 58.729 | 36.000 | 20.33 | 6.35 | 36.79 | 3.06 |
3703 | 3830 | 5.393352 | GGTTTCTGAATTATGCATGCTGACA | 60.393 | 40.000 | 20.33 | 9.35 | 0.00 | 3.58 |
3704 | 3831 | 5.039333 | GGTTTCTGAATTATGCATGCTGAC | 58.961 | 41.667 | 20.33 | 5.24 | 0.00 | 3.51 |
3705 | 3832 | 4.705991 | TGGTTTCTGAATTATGCATGCTGA | 59.294 | 37.500 | 20.33 | 3.34 | 0.00 | 4.26 |
3706 | 3833 | 4.802039 | GTGGTTTCTGAATTATGCATGCTG | 59.198 | 41.667 | 20.33 | 0.78 | 0.00 | 4.41 |
3707 | 3834 | 4.463539 | TGTGGTTTCTGAATTATGCATGCT | 59.536 | 37.500 | 20.33 | 7.07 | 0.00 | 3.79 |
3708 | 3835 | 4.563976 | GTGTGGTTTCTGAATTATGCATGC | 59.436 | 41.667 | 11.82 | 11.82 | 0.00 | 4.06 |
3709 | 3836 | 4.794762 | CGTGTGGTTTCTGAATTATGCATG | 59.205 | 41.667 | 10.16 | 0.00 | 0.00 | 4.06 |
3710 | 3837 | 4.458989 | ACGTGTGGTTTCTGAATTATGCAT | 59.541 | 37.500 | 3.79 | 3.79 | 0.00 | 3.96 |
3711 | 3838 | 3.818210 | ACGTGTGGTTTCTGAATTATGCA | 59.182 | 39.130 | 0.00 | 0.00 | 0.00 | 3.96 |
3712 | 3839 | 4.419522 | ACGTGTGGTTTCTGAATTATGC | 57.580 | 40.909 | 0.00 | 0.00 | 0.00 | 3.14 |
3713 | 3840 | 8.964420 | ATTAAACGTGTGGTTTCTGAATTATG | 57.036 | 30.769 | 0.00 | 0.00 | 45.60 | 1.90 |
3714 | 3841 | 8.788806 | TGATTAAACGTGTGGTTTCTGAATTAT | 58.211 | 29.630 | 0.00 | 0.00 | 45.60 | 1.28 |
3715 | 3842 | 8.155821 | TGATTAAACGTGTGGTTTCTGAATTA | 57.844 | 30.769 | 0.00 | 0.00 | 45.60 | 1.40 |
3716 | 3843 | 7.033530 | TGATTAAACGTGTGGTTTCTGAATT | 57.966 | 32.000 | 0.00 | 0.00 | 45.60 | 2.17 |
3717 | 3844 | 6.627395 | TGATTAAACGTGTGGTTTCTGAAT | 57.373 | 33.333 | 0.00 | 0.00 | 45.60 | 2.57 |
3718 | 3845 | 6.627395 | ATGATTAAACGTGTGGTTTCTGAA | 57.373 | 33.333 | 0.00 | 0.00 | 45.60 | 3.02 |
3719 | 3846 | 6.627395 | AATGATTAAACGTGTGGTTTCTGA | 57.373 | 33.333 | 0.00 | 0.00 | 45.60 | 3.27 |
3720 | 3847 | 7.537306 | CCTAAATGATTAAACGTGTGGTTTCTG | 59.463 | 37.037 | 0.00 | 0.00 | 45.60 | 3.02 |
3721 | 3848 | 7.308951 | CCCTAAATGATTAAACGTGTGGTTTCT | 60.309 | 37.037 | 0.00 | 0.00 | 45.60 | 2.52 |
3722 | 3849 | 6.804783 | CCCTAAATGATTAAACGTGTGGTTTC | 59.195 | 38.462 | 0.00 | 0.00 | 45.60 | 2.78 |
3724 | 3851 | 5.184287 | CCCCTAAATGATTAAACGTGTGGTT | 59.816 | 40.000 | 0.00 | 0.00 | 41.76 | 3.67 |
3725 | 3852 | 4.703093 | CCCCTAAATGATTAAACGTGTGGT | 59.297 | 41.667 | 0.00 | 0.00 | 0.00 | 4.16 |
3726 | 3853 | 4.097286 | CCCCCTAAATGATTAAACGTGTGG | 59.903 | 45.833 | 0.00 | 0.00 | 0.00 | 4.17 |
3727 | 3854 | 4.439563 | GCCCCCTAAATGATTAAACGTGTG | 60.440 | 45.833 | 0.00 | 0.00 | 0.00 | 3.82 |
3728 | 3855 | 3.697542 | GCCCCCTAAATGATTAAACGTGT | 59.302 | 43.478 | 0.00 | 0.00 | 0.00 | 4.49 |
3729 | 3856 | 3.697045 | TGCCCCCTAAATGATTAAACGTG | 59.303 | 43.478 | 0.00 | 0.00 | 0.00 | 4.49 |
3730 | 3857 | 3.951680 | CTGCCCCCTAAATGATTAAACGT | 59.048 | 43.478 | 0.00 | 0.00 | 0.00 | 3.99 |
3731 | 3858 | 4.204012 | TCTGCCCCCTAAATGATTAAACG | 58.796 | 43.478 | 0.00 | 0.00 | 0.00 | 3.60 |
3732 | 3859 | 6.775629 | TGTATCTGCCCCCTAAATGATTAAAC | 59.224 | 38.462 | 0.00 | 0.00 | 0.00 | 2.01 |
3733 | 3860 | 6.916909 | TGTATCTGCCCCCTAAATGATTAAA | 58.083 | 36.000 | 0.00 | 0.00 | 0.00 | 1.52 |
3734 | 3861 | 6.523035 | TGTATCTGCCCCCTAAATGATTAA | 57.477 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
3735 | 3862 | 6.718593 | ATGTATCTGCCCCCTAAATGATTA | 57.281 | 37.500 | 0.00 | 0.00 | 0.00 | 1.75 |
3736 | 3863 | 5.605540 | ATGTATCTGCCCCCTAAATGATT | 57.394 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
3737 | 3864 | 5.605540 | AATGTATCTGCCCCCTAAATGAT | 57.394 | 39.130 | 0.00 | 0.00 | 0.00 | 2.45 |
3738 | 3865 | 5.139727 | CAAATGTATCTGCCCCCTAAATGA | 58.860 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
3739 | 3866 | 4.895297 | ACAAATGTATCTGCCCCCTAAATG | 59.105 | 41.667 | 0.00 | 0.00 | 0.00 | 2.32 |
3740 | 3867 | 5.142806 | ACAAATGTATCTGCCCCCTAAAT | 57.857 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
3741 | 3868 | 4.601406 | ACAAATGTATCTGCCCCCTAAA | 57.399 | 40.909 | 0.00 | 0.00 | 0.00 | 1.85 |
3742 | 3869 | 4.601406 | AACAAATGTATCTGCCCCCTAA | 57.399 | 40.909 | 0.00 | 0.00 | 0.00 | 2.69 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.