Multiple sequence alignment - TraesCS7D01G228900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G228900 chr7D 100.000 8187 0 0 1 8187 188986470 188994656 0.000000e+00 15119.0
1 TraesCS7D01G228900 chr7D 87.383 642 60 17 857 1486 184588712 184588080 0.000000e+00 717.0
2 TraesCS7D01G228900 chr7D 75.819 1526 269 80 5917 7396 184864573 184863102 0.000000e+00 682.0
3 TraesCS7D01G228900 chr7D 85.484 620 73 12 877 1485 184865711 184865098 1.500000e-176 630.0
4 TraesCS7D01G228900 chr7D 85.799 338 38 6 5917 6246 184587907 184587572 4.700000e-92 350.0
5 TraesCS7D01G228900 chr7D 85.646 209 22 6 1512 1713 142882816 142883023 6.440000e-51 213.0
6 TraesCS7D01G228900 chr7D 82.143 224 38 2 2114 2336 98985372 98985150 3.020000e-44 191.0
7 TraesCS7D01G228900 chr7D 96.591 88 3 0 8100 8187 219201473 219201560 6.620000e-31 147.0
8 TraesCS7D01G228900 chr7A 91.402 4501 315 32 3631 8099 195193310 195188850 0.000000e+00 6102.0
9 TraesCS7D01G228900 chr7A 95.211 710 24 7 808 1513 195199791 195199088 0.000000e+00 1114.0
10 TraesCS7D01G228900 chr7A 86.145 664 59 20 857 1507 191698094 191697451 0.000000e+00 686.0
11 TraesCS7D01G228900 chr7A 89.674 552 33 7 1 529 195200675 195200125 0.000000e+00 682.0
12 TraesCS7D01G228900 chr7A 83.282 646 90 12 863 1494 191836006 191835365 5.510000e-161 579.0
13 TraesCS7D01G228900 chr7A 90.487 431 38 3 2338 2766 195198387 195197958 4.290000e-157 566.0
14 TraesCS7D01G228900 chr7A 80.506 672 79 22 1709 2336 195199094 195198431 1.240000e-127 468.0
15 TraesCS7D01G228900 chr7A 81.027 448 69 10 5962 6399 191697366 191696925 7.870000e-90 342.0
16 TraesCS7D01G228900 chr7A 80.220 273 47 5 2072 2338 731972937 731973208 1.800000e-46 198.0
17 TraesCS7D01G228900 chr7A 86.765 136 18 0 3500 3635 195197924 195197789 1.420000e-32 152.0
18 TraesCS7D01G228900 chr7B 89.229 3426 295 33 2393 5784 333417446 333420831 0.000000e+00 4215.0
19 TraesCS7D01G228900 chr7B 92.027 2333 154 13 5791 8097 333420886 333423212 0.000000e+00 3249.0
20 TraesCS7D01G228900 chr7B 84.385 967 60 34 3 939 333403562 333404467 0.000000e+00 865.0
21 TraesCS7D01G228900 chr7B 88.298 658 60 15 857 1506 154278508 154277860 0.000000e+00 773.0
22 TraesCS7D01G228900 chr7B 87.126 668 65 15 857 1507 154363319 154362656 0.000000e+00 737.0
23 TraesCS7D01G228900 chr7B 86.667 615 68 11 880 1485 154567821 154567212 0.000000e+00 669.0
24 TraesCS7D01G228900 chr7B 93.766 385 21 2 928 1312 333406024 333406405 7.130000e-160 575.0
25 TraesCS7D01G228900 chr7B 85.886 333 37 7 5917 6241 154277697 154277367 6.080000e-91 346.0
26 TraesCS7D01G228900 chr7B 79.070 473 76 21 5884 6341 154563867 154563403 3.710000e-78 303.0
27 TraesCS7D01G228900 chr7B 91.589 214 9 4 1305 1513 333407546 333407755 3.740000e-73 287.0
28 TraesCS7D01G228900 chr7B 82.075 318 45 5 2030 2336 333408305 333408621 2.270000e-65 261.0
29 TraesCS7D01G228900 chr7B 84.000 200 15 7 1721 1915 333407756 333407943 8.440000e-40 176.0
30 TraesCS7D01G228900 chr5B 86.667 210 19 6 1512 1713 644577054 644576846 2.970000e-54 224.0
31 TraesCS7D01G228900 chr5B 85.238 210 19 9 1512 1713 136408566 136408771 1.080000e-48 206.0
32 TraesCS7D01G228900 chrUn 86.058 208 22 5 1512 1713 35449410 35449616 4.980000e-52 217.0
33 TraesCS7D01G228900 chr4B 85.782 211 21 8 1511 1713 663635198 663634989 1.790000e-51 215.0
34 TraesCS7D01G228900 chr4B 85.792 183 26 0 2154 2336 581321332 581321150 2.330000e-45 195.0
35 TraesCS7D01G228900 chr3B 86.207 203 19 7 1511 1706 511851391 511851591 2.320000e-50 211.0
36 TraesCS7D01G228900 chr3B 89.286 56 6 0 2338 2393 254492905 254492960 4.100000e-08 71.3
37 TraesCS7D01G228900 chr6B 85.238 210 22 9 1512 1713 3717457 3717249 2.990000e-49 207.0
38 TraesCS7D01G228900 chr6A 84.762 210 25 6 1511 1713 180397438 180397229 3.870000e-48 204.0
39 TraesCS7D01G228900 chr4D 84.762 210 23 6 1512 1713 3572042 3571834 1.390000e-47 202.0
40 TraesCS7D01G228900 chr4D 91.837 98 8 0 8090 8187 429463198 429463101 3.990000e-28 137.0
41 TraesCS7D01G228900 chr2B 80.515 272 43 7 2072 2336 707977419 707977151 5.010000e-47 200.0
42 TraesCS7D01G228900 chr2B 83.333 192 31 1 2145 2336 385215351 385215161 8.440000e-40 176.0
43 TraesCS7D01G228900 chr2B 80.660 212 39 2 2126 2336 705878451 705878661 6.570000e-36 163.0
44 TraesCS7D01G228900 chr2B 96.591 88 3 0 8100 8187 640374532 640374619 6.620000e-31 147.0
45 TraesCS7D01G228900 chr1D 78.767 292 49 7 2114 2393 16391818 16392108 5.050000e-42 183.0
46 TraesCS7D01G228900 chr1D 91.837 98 7 1 8091 8187 121559492 121559589 1.430000e-27 135.0
47 TraesCS7D01G228900 chr6D 94.737 95 5 0 8093 8187 392980940 392980846 1.840000e-31 148.0
48 TraesCS7D01G228900 chr6D 92.708 96 6 1 8093 8187 389143190 389143285 3.990000e-28 137.0
49 TraesCS7D01G228900 chr2D 96.591 88 3 0 8100 8187 241300570 241300483 6.620000e-31 147.0
50 TraesCS7D01G228900 chr2D 95.556 90 4 0 8098 8187 241298995 241298906 2.380000e-30 145.0
51 TraesCS7D01G228900 chr2D 93.617 94 5 1 8094 8187 367290969 367291061 1.110000e-28 139.0
52 TraesCS7D01G228900 chr5A 93.617 47 3 0 2072 2118 30116430 30116476 4.100000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G228900 chr7D 188986470 188994656 8186 False 15119.0 15119 100.0000 1 8187 1 chr7D.!!$F2 8186
1 TraesCS7D01G228900 chr7D 184863102 184865711 2609 True 656.0 682 80.6515 877 7396 2 chr7D.!!$R3 6519
2 TraesCS7D01G228900 chr7D 184587572 184588712 1140 True 533.5 717 86.5910 857 6246 2 chr7D.!!$R2 5389
3 TraesCS7D01G228900 chr7A 195188850 195193310 4460 True 6102.0 6102 91.4020 3631 8099 1 chr7A.!!$R2 4468
4 TraesCS7D01G228900 chr7A 195197789 195200675 2886 True 596.4 1114 88.5286 1 3635 5 chr7A.!!$R4 3634
5 TraesCS7D01G228900 chr7A 191835365 191836006 641 True 579.0 579 83.2820 863 1494 1 chr7A.!!$R1 631
6 TraesCS7D01G228900 chr7A 191696925 191698094 1169 True 514.0 686 83.5860 857 6399 2 chr7A.!!$R3 5542
7 TraesCS7D01G228900 chr7B 333417446 333423212 5766 False 3732.0 4215 90.6280 2393 8097 2 chr7B.!!$F2 5704
8 TraesCS7D01G228900 chr7B 154362656 154363319 663 True 737.0 737 87.1260 857 1507 1 chr7B.!!$R1 650
9 TraesCS7D01G228900 chr7B 154277367 154278508 1141 True 559.5 773 87.0920 857 6241 2 chr7B.!!$R2 5384
10 TraesCS7D01G228900 chr7B 154563403 154567821 4418 True 486.0 669 82.8685 880 6341 2 chr7B.!!$R3 5461
11 TraesCS7D01G228900 chr7B 333403562 333408621 5059 False 432.8 865 87.1630 3 2336 5 chr7B.!!$F1 2333

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
776 966 0.032815 TTCAACATCACGGACTCGCA 59.967 50.000 0.0 0.0 40.63 5.10 F
780 970 0.037326 ACATCACGGACTCGCAACAT 60.037 50.000 0.0 0.0 40.63 2.71 F
782 972 0.246360 ATCACGGACTCGCAACATCA 59.754 50.000 0.0 0.0 40.63 3.07 F
2413 5786 0.318699 GTTCGACAAGCCCCAAAAGC 60.319 55.000 0.0 0.0 0.00 3.51 F
3279 6672 0.392998 ATGTCCCAACACTCGATGGC 60.393 55.000 0.0 0.0 38.48 4.40 F
4598 7994 0.176680 CTCCATGTTCCCCTCGACAG 59.823 60.000 0.0 0.0 0.00 3.51 F
4702 8098 0.952984 GCCTGCCCTATCTTCATCGC 60.953 60.000 0.0 0.0 0.00 4.58 F
4950 8346 1.006758 TCCGAGTAGTCAACCCTGGAT 59.993 52.381 0.0 0.0 0.00 3.41 F
6134 12557 0.041238 TTGGATCACGGAGGAGGACT 59.959 55.000 0.0 0.0 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2213 5541 0.398318 GGAGTGGAGTGAAGTGGCTT 59.602 55.000 0.00 0.00 0.00 4.35 R
2628 6003 0.527565 GGTGCTACGTCGACCCTTTA 59.472 55.000 10.58 0.00 0.00 1.85 R
2728 6103 1.006758 TCCACTCGGGGTAGACATCTT 59.993 52.381 0.00 0.00 37.22 2.40 R
3355 6748 0.179200 GTAAGCCCGAATGCACGTTG 60.179 55.000 0.00 0.00 0.00 4.10 R
4730 8126 0.034670 AGAAGAATGACCAGCTGGGC 60.035 55.000 35.42 34.37 45.93 5.36 R
6077 12500 0.621280 TCATCTGGTGAGCCCCATCA 60.621 55.000 0.00 0.00 34.15 3.07 R
6134 12557 3.225104 ACTGGGTCGTGTAGTACTTGAA 58.775 45.455 0.00 0.00 0.00 2.69 R
6931 13408 3.051581 AGTTAGATCCCATGTCCTGCAT 58.948 45.455 0.00 0.00 38.60 3.96 R
8042 14525 1.072806 TGCTTCCTTCTGCTCATGTGT 59.927 47.619 0.00 0.00 0.00 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 4.749245 TTTTCGAGAAAGATGACTTGGC 57.251 40.909 0.00 0.00 36.39 4.52
46 47 1.002366 CGAGAAAGATGACTTGGCGG 58.998 55.000 0.00 0.00 36.39 6.13
119 124 1.635663 GGCACCGACTTGACAATCCG 61.636 60.000 0.00 0.00 0.00 4.18
120 125 1.635663 GCACCGACTTGACAATCCGG 61.636 60.000 20.24 20.24 45.09 5.14
157 162 3.503748 GTGTTTGCAGACAAATAGAGGCT 59.496 43.478 12.22 0.00 46.93 4.58
181 186 8.352201 GCTTACATTTGTATGCCTTCAATGATA 58.648 33.333 14.43 0.00 42.42 2.15
202 209 2.264005 TGGAAAAGAAAGGTGCGCTA 57.736 45.000 9.73 0.00 0.00 4.26
247 254 7.403231 AGAGGAACTACTTGGAATGAAATAGGA 59.597 37.037 0.00 0.00 41.55 2.94
251 258 7.741554 ACTACTTGGAATGAAATAGGAGAGT 57.258 36.000 0.00 0.00 0.00 3.24
299 315 8.668353 GCAAGTGTCATCTTGTTCTAATAATGA 58.332 33.333 13.29 0.00 44.41 2.57
335 351 2.609491 GGGGAAAACAAAATCGCACTCC 60.609 50.000 0.00 0.00 0.00 3.85
343 359 3.250040 ACAAAATCGCACTCCTGTACAAC 59.750 43.478 0.00 0.00 0.00 3.32
441 469 4.261614 GGGTTCAAGAATTCAAGTCACACC 60.262 45.833 8.44 4.22 0.00 4.16
479 507 4.722855 ACGTTTCGGGCGTACGGG 62.723 66.667 18.39 0.00 41.06 5.28
532 561 9.903682 CACTATCAAAATATCAATTGATCACCC 57.096 33.333 23.95 0.00 43.33 4.61
533 562 9.872684 ACTATCAAAATATCAATTGATCACCCT 57.127 29.630 23.95 3.15 43.33 4.34
581 610 1.814169 GGCGTCCGGAGATTTCCAC 60.814 63.158 3.06 0.00 44.26 4.02
602 637 7.203218 TCCACTGAAATAACATCACTATCGAG 58.797 38.462 0.00 0.00 0.00 4.04
604 639 8.135529 CCACTGAAATAACATCACTATCGAGTA 58.864 37.037 0.00 0.00 33.32 2.59
611 646 3.243101 ACATCACTATCGAGTAAGGTGCG 60.243 47.826 0.00 0.00 33.32 5.34
618 653 0.110823 CGAGTAAGGTGCGTGCAAAC 60.111 55.000 0.00 0.00 0.00 2.93
621 656 1.746220 AGTAAGGTGCGTGCAAACAAA 59.254 42.857 0.00 0.00 0.00 2.83
623 658 0.814457 AAGGTGCGTGCAAACAAAGA 59.186 45.000 0.00 0.00 0.00 2.52
624 659 1.032014 AGGTGCGTGCAAACAAAGAT 58.968 45.000 0.00 0.00 0.00 2.40
629 664 3.361644 GTGCGTGCAAACAAAGATACATG 59.638 43.478 0.00 0.00 0.00 3.21
631 666 3.361644 GCGTGCAAACAAAGATACATGTG 59.638 43.478 9.11 0.00 0.00 3.21
632 667 3.361644 CGTGCAAACAAAGATACATGTGC 59.638 43.478 9.11 0.00 0.00 4.57
634 669 4.383649 GTGCAAACAAAGATACATGTGCAG 59.616 41.667 9.11 0.00 31.63 4.41
635 670 3.365820 GCAAACAAAGATACATGTGCAGC 59.634 43.478 9.11 0.00 0.00 5.25
637 672 3.077484 ACAAAGATACATGTGCAGCCT 57.923 42.857 9.11 0.00 0.00 4.58
638 673 2.751259 ACAAAGATACATGTGCAGCCTG 59.249 45.455 9.11 1.56 0.00 4.85
639 674 2.751259 CAAAGATACATGTGCAGCCTGT 59.249 45.455 9.11 0.00 0.00 4.00
640 675 2.034104 AGATACATGTGCAGCCTGTG 57.966 50.000 9.11 0.00 0.00 3.66
641 676 1.019673 GATACATGTGCAGCCTGTGG 58.980 55.000 9.11 0.00 0.00 4.17
655 845 1.665735 CCTGTGGCAAAATTTCGTCCG 60.666 52.381 0.00 0.00 0.00 4.79
683 873 2.198287 GCCTATGCATGCACCAGGG 61.198 63.158 34.65 27.30 37.47 4.45
768 958 0.798776 GACAGGGCTTCAACATCACG 59.201 55.000 0.00 0.00 0.00 4.35
769 959 0.606401 ACAGGGCTTCAACATCACGG 60.606 55.000 0.00 0.00 0.00 4.94
770 960 0.321564 CAGGGCTTCAACATCACGGA 60.322 55.000 0.00 0.00 0.00 4.69
771 961 0.321653 AGGGCTTCAACATCACGGAC 60.322 55.000 0.00 0.00 0.00 4.79
772 962 0.321653 GGGCTTCAACATCACGGACT 60.322 55.000 0.00 0.00 0.00 3.85
773 963 1.079503 GGCTTCAACATCACGGACTC 58.920 55.000 0.00 0.00 0.00 3.36
774 964 0.716108 GCTTCAACATCACGGACTCG 59.284 55.000 0.00 0.00 43.02 4.18
775 965 0.716108 CTTCAACATCACGGACTCGC 59.284 55.000 0.00 0.00 40.63 5.03
776 966 0.032815 TTCAACATCACGGACTCGCA 59.967 50.000 0.00 0.00 40.63 5.10
777 967 0.032815 TCAACATCACGGACTCGCAA 59.967 50.000 0.00 0.00 40.63 4.85
778 968 0.163788 CAACATCACGGACTCGCAAC 59.836 55.000 0.00 0.00 40.63 4.17
779 969 0.249699 AACATCACGGACTCGCAACA 60.250 50.000 0.00 0.00 40.63 3.33
780 970 0.037326 ACATCACGGACTCGCAACAT 60.037 50.000 0.00 0.00 40.63 2.71
781 971 0.647410 CATCACGGACTCGCAACATC 59.353 55.000 0.00 0.00 40.63 3.06
782 972 0.246360 ATCACGGACTCGCAACATCA 59.754 50.000 0.00 0.00 40.63 3.07
783 973 0.666274 TCACGGACTCGCAACATCAC 60.666 55.000 0.00 0.00 40.63 3.06
795 985 2.350772 GCAACATCACTGCGTTAAAGCT 60.351 45.455 14.49 0.00 38.13 3.74
821 1012 1.373435 CTAACACGCAACCCCCTCA 59.627 57.895 0.00 0.00 0.00 3.86
823 1014 2.400269 TAACACGCAACCCCCTCACC 62.400 60.000 0.00 0.00 0.00 4.02
873 1064 3.621805 TGCGATCCACCCACACGT 61.622 61.111 0.00 0.00 0.00 4.49
876 1067 1.515519 CGATCCACCCACACGTACG 60.516 63.158 15.01 15.01 0.00 3.67
885 1078 1.677576 CCCACACGTACGCCTTATAGA 59.322 52.381 16.72 0.00 0.00 1.98
967 2725 1.303074 CTGCTCCTGCTTTGCTCCA 60.303 57.895 0.00 0.00 40.48 3.86
1513 4468 9.032420 GTAAGATACTACCATGCAAAACTCTAC 57.968 37.037 0.00 0.00 0.00 2.59
1516 4471 8.414778 AGATACTACCATGCAAAACTCTACTAC 58.585 37.037 0.00 0.00 0.00 2.73
1520 4475 4.192317 CCATGCAAAACTCTACTACCTCC 58.808 47.826 0.00 0.00 0.00 4.30
1521 4476 3.587797 TGCAAAACTCTACTACCTCCG 57.412 47.619 0.00 0.00 0.00 4.63
1522 4477 2.895404 TGCAAAACTCTACTACCTCCGT 59.105 45.455 0.00 0.00 0.00 4.69
1523 4478 3.057033 TGCAAAACTCTACTACCTCCGTC 60.057 47.826 0.00 0.00 0.00 4.79
1524 4479 3.193056 GCAAAACTCTACTACCTCCGTCT 59.807 47.826 0.00 0.00 0.00 4.18
1525 4480 4.397417 GCAAAACTCTACTACCTCCGTCTA 59.603 45.833 0.00 0.00 0.00 2.59
1526 4481 5.448904 GCAAAACTCTACTACCTCCGTCTAG 60.449 48.000 0.00 0.00 0.00 2.43
1527 4482 4.420522 AACTCTACTACCTCCGTCTAGG 57.579 50.000 0.00 0.00 42.82 3.02
1538 4493 5.531122 CCTCCGTCTAGGTCAATAAATCA 57.469 43.478 0.00 0.00 41.99 2.57
1539 4494 6.102897 CCTCCGTCTAGGTCAATAAATCAT 57.897 41.667 0.00 0.00 41.99 2.45
1540 4495 6.525629 CCTCCGTCTAGGTCAATAAATCATT 58.474 40.000 0.00 0.00 41.99 2.57
1541 4496 6.647067 CCTCCGTCTAGGTCAATAAATCATTC 59.353 42.308 0.00 0.00 41.99 2.67
1542 4497 6.213677 TCCGTCTAGGTCAATAAATCATTCG 58.786 40.000 0.00 0.00 41.99 3.34
1543 4498 5.983720 CCGTCTAGGTCAATAAATCATTCGT 59.016 40.000 0.00 0.00 34.51 3.85
1544 4499 6.074302 CCGTCTAGGTCAATAAATCATTCGTG 60.074 42.308 0.00 0.00 34.51 4.35
1545 4500 6.475727 CGTCTAGGTCAATAAATCATTCGTGT 59.524 38.462 0.00 0.00 0.00 4.49
1546 4501 7.646526 CGTCTAGGTCAATAAATCATTCGTGTA 59.353 37.037 0.00 0.00 0.00 2.90
1547 4502 8.969267 GTCTAGGTCAATAAATCATTCGTGTAG 58.031 37.037 0.00 0.00 0.00 2.74
1548 4503 8.692710 TCTAGGTCAATAAATCATTCGTGTAGT 58.307 33.333 0.00 0.00 0.00 2.73
1549 4504 9.314321 CTAGGTCAATAAATCATTCGTGTAGTT 57.686 33.333 0.00 0.00 0.00 2.24
1550 4505 8.197988 AGGTCAATAAATCATTCGTGTAGTTC 57.802 34.615 0.00 0.00 0.00 3.01
1551 4506 8.041323 AGGTCAATAAATCATTCGTGTAGTTCT 58.959 33.333 0.00 0.00 0.00 3.01
1552 4507 9.309516 GGTCAATAAATCATTCGTGTAGTTCTA 57.690 33.333 0.00 0.00 0.00 2.10
1559 4514 9.823647 AAATCATTCGTGTAGTTCTAGATCATT 57.176 29.630 3.70 0.00 0.00 2.57
1560 4515 8.809159 ATCATTCGTGTAGTTCTAGATCATTG 57.191 34.615 3.70 0.00 0.00 2.82
1561 4516 7.996385 TCATTCGTGTAGTTCTAGATCATTGA 58.004 34.615 3.70 0.00 0.00 2.57
1562 4517 8.633561 TCATTCGTGTAGTTCTAGATCATTGAT 58.366 33.333 0.00 0.00 0.00 2.57
1563 4518 9.254133 CATTCGTGTAGTTCTAGATCATTGATT 57.746 33.333 0.00 0.00 0.00 2.57
1564 4519 9.823647 ATTCGTGTAGTTCTAGATCATTGATTT 57.176 29.630 0.00 0.00 0.00 2.17
1566 4521 9.952188 TCGTGTAGTTCTAGATCATTGATTTAG 57.048 33.333 14.98 14.98 30.86 1.85
1567 4522 9.952188 CGTGTAGTTCTAGATCATTGATTTAGA 57.048 33.333 18.27 18.27 35.10 2.10
1691 4646 7.604386 GTTAAATCGTTAACCTAGAACTACGC 58.396 38.462 0.00 0.00 42.20 4.42
1692 4647 3.389687 TCGTTAACCTAGAACTACGCG 57.610 47.619 3.53 3.53 0.00 6.01
1693 4648 3.000041 TCGTTAACCTAGAACTACGCGA 59.000 45.455 15.93 0.00 0.00 5.87
1694 4649 3.435327 TCGTTAACCTAGAACTACGCGAA 59.565 43.478 15.93 0.00 0.00 4.70
1695 4650 3.539954 CGTTAACCTAGAACTACGCGAAC 59.460 47.826 15.93 0.02 0.00 3.95
1696 4651 4.475944 GTTAACCTAGAACTACGCGAACA 58.524 43.478 15.93 0.00 0.00 3.18
1697 4652 3.648339 AACCTAGAACTACGCGAACAA 57.352 42.857 15.93 0.00 0.00 2.83
1698 4653 2.938869 ACCTAGAACTACGCGAACAAC 58.061 47.619 15.93 0.66 0.00 3.32
1699 4654 2.555757 ACCTAGAACTACGCGAACAACT 59.444 45.455 15.93 9.07 0.00 3.16
1700 4655 3.005155 ACCTAGAACTACGCGAACAACTT 59.995 43.478 15.93 0.00 0.00 2.66
1701 4656 4.216257 ACCTAGAACTACGCGAACAACTTA 59.784 41.667 15.93 0.00 0.00 2.24
1702 4657 5.105997 ACCTAGAACTACGCGAACAACTTAT 60.106 40.000 15.93 0.00 0.00 1.73
1703 4658 5.803967 CCTAGAACTACGCGAACAACTTATT 59.196 40.000 15.93 0.00 0.00 1.40
1704 4659 5.758570 AGAACTACGCGAACAACTTATTC 57.241 39.130 15.93 3.24 0.00 1.75
1705 4660 5.224888 AGAACTACGCGAACAACTTATTCA 58.775 37.500 15.93 0.00 0.00 2.57
1706 4661 5.867716 AGAACTACGCGAACAACTTATTCAT 59.132 36.000 15.93 0.00 0.00 2.57
1707 4662 5.697848 ACTACGCGAACAACTTATTCATC 57.302 39.130 15.93 0.00 0.00 2.92
1708 4663 5.165676 ACTACGCGAACAACTTATTCATCA 58.834 37.500 15.93 0.00 0.00 3.07
1709 4664 5.636121 ACTACGCGAACAACTTATTCATCAA 59.364 36.000 15.93 0.00 0.00 2.57
1710 4665 4.957971 ACGCGAACAACTTATTCATCAAG 58.042 39.130 15.93 0.00 0.00 3.02
1711 4666 4.688879 ACGCGAACAACTTATTCATCAAGA 59.311 37.500 15.93 0.00 0.00 3.02
1712 4667 5.015733 CGCGAACAACTTATTCATCAAGAC 58.984 41.667 0.00 0.00 0.00 3.01
1713 4668 5.163953 CGCGAACAACTTATTCATCAAGACT 60.164 40.000 0.00 0.00 0.00 3.24
1714 4669 6.034577 CGCGAACAACTTATTCATCAAGACTA 59.965 38.462 0.00 0.00 0.00 2.59
1715 4670 7.394872 GCGAACAACTTATTCATCAAGACTAG 58.605 38.462 0.00 0.00 0.00 2.57
1716 4671 7.063544 GCGAACAACTTATTCATCAAGACTAGT 59.936 37.037 0.00 0.00 0.00 2.57
1717 4672 9.569167 CGAACAACTTATTCATCAAGACTAGTA 57.431 33.333 0.00 0.00 0.00 1.82
1754 4709 1.388547 TTTAACCATGCGGATGAGCC 58.611 50.000 19.50 0.00 36.02 4.70
1796 4751 8.284945 AGATAAGAGAATTGTAAAGCATGCAA 57.715 30.769 21.98 5.01 38.05 4.08
1797 4752 8.742777 AGATAAGAGAATTGTAAAGCATGCAAA 58.257 29.630 21.98 6.36 37.18 3.68
1798 4753 9.525409 GATAAGAGAATTGTAAAGCATGCAAAT 57.475 29.630 21.98 7.81 37.18 2.32
1799 4754 7.823149 AAGAGAATTGTAAAGCATGCAAATC 57.177 32.000 21.98 7.53 37.18 2.17
1860 4823 0.790207 CACCGACAACCAACGATCTG 59.210 55.000 0.00 0.00 0.00 2.90
1885 4857 8.773404 GTACAGATCAGTACAACCAAAGTAAT 57.227 34.615 20.11 0.00 42.97 1.89
1886 4858 7.672983 ACAGATCAGTACAACCAAAGTAATG 57.327 36.000 0.00 0.00 38.49 1.90
1922 5228 7.095695 AGGACCATAAACATAAATTGAACGG 57.904 36.000 0.00 0.00 0.00 4.44
1987 5293 2.124570 CAATCCAGCACCCCTCGG 60.125 66.667 0.00 0.00 0.00 4.63
1996 5302 1.302033 CACCCCTCGGAGCATATGC 60.302 63.158 20.36 20.36 42.49 3.14
1997 5303 1.766059 ACCCCTCGGAGCATATGCA 60.766 57.895 28.62 7.86 45.16 3.96
2005 5312 1.592669 GAGCATATGCAGCGGACGT 60.593 57.895 28.62 5.98 45.16 4.34
2012 5319 0.391661 ATGCAGCGGACGTCTCAAAT 60.392 50.000 16.46 0.00 0.00 2.32
2014 5321 1.421485 CAGCGGACGTCTCAAATGC 59.579 57.895 16.46 9.94 0.00 3.56
2016 5323 2.750888 GCGGACGTCTCAAATGCCC 61.751 63.158 16.46 0.00 0.00 5.36
2017 5324 1.079127 CGGACGTCTCAAATGCCCT 60.079 57.895 16.46 0.00 0.00 5.19
2018 5325 1.361668 CGGACGTCTCAAATGCCCTG 61.362 60.000 16.46 0.00 0.00 4.45
2020 5327 1.648467 GACGTCTCAAATGCCCTGGC 61.648 60.000 8.70 0.00 42.35 4.85
2038 5345 3.387947 AGACGGCCCGGTTACTGG 61.388 66.667 8.57 2.61 0.00 4.00
2046 5353 2.433664 CGGTTACTGGCCGGTCAC 60.434 66.667 23.73 21.08 44.98 3.67
2070 5387 0.325296 ATTCGACCCAGGTAGGCTCA 60.325 55.000 0.00 0.00 35.39 4.26
2105 5422 2.278596 CCGGCACCACTCGTATCG 60.279 66.667 0.00 0.00 0.00 2.92
2121 5449 4.342951 TCGTATCGAGTTCAAATATGGGGT 59.657 41.667 0.00 0.00 0.00 4.95
2123 5451 3.992943 TCGAGTTCAAATATGGGGTGT 57.007 42.857 0.00 0.00 0.00 4.16
2165 5493 4.742201 CTGGTCCACGCTGGTCCG 62.742 72.222 12.75 6.73 46.75 4.79
2184 5512 2.289444 CCGCTCGACCCCACATATATTT 60.289 50.000 0.00 0.00 0.00 1.40
2193 5521 4.731929 ACCCCACATATATTTCTTCCCACT 59.268 41.667 0.00 0.00 0.00 4.00
2196 5524 4.452455 CCACATATATTTCTTCCCACTCGC 59.548 45.833 0.00 0.00 0.00 5.03
2198 5526 5.760253 CACATATATTTCTTCCCACTCGCTT 59.240 40.000 0.00 0.00 0.00 4.68
2209 5537 3.121030 CTCGCTTGCCGGACCAAG 61.121 66.667 5.05 11.89 43.88 3.61
2213 5541 4.659172 CTTGCCGGACCAAGCCCA 62.659 66.667 5.05 0.00 36.18 5.36
2247 5580 2.451493 TCCCCTCTGCCACCCAAA 60.451 61.111 0.00 0.00 0.00 3.28
2252 5585 1.672356 CTCTGCCACCCAAACTCCG 60.672 63.158 0.00 0.00 0.00 4.63
2320 5653 2.242708 AGTCCTTCACCTCTAGATCCGT 59.757 50.000 0.00 0.00 0.00 4.69
2326 5659 0.838608 ACCTCTAGATCCGTCGACCT 59.161 55.000 10.58 3.51 0.00 3.85
2328 5661 1.141645 CTCTAGATCCGTCGACCTCG 58.858 60.000 10.58 0.00 41.45 4.63
2346 5719 4.537433 AGCTCATTCGCCGCTCCC 62.537 66.667 0.00 0.00 0.00 4.30
2368 5741 1.888436 GACGAGACCCATGTGAGGCA 61.888 60.000 0.00 0.00 0.00 4.75
2413 5786 0.318699 GTTCGACAAGCCCCAAAAGC 60.319 55.000 0.00 0.00 0.00 3.51
2415 5788 0.753479 TCGACAAGCCCCAAAAGCAA 60.753 50.000 0.00 0.00 0.00 3.91
2532 5905 0.536724 TCATCTTCTTAGCCAGCGCA 59.463 50.000 11.47 0.00 37.52 6.09
2533 5906 0.935898 CATCTTCTTAGCCAGCGCAG 59.064 55.000 11.47 0.00 37.52 5.18
2597 5972 4.435970 TCCTAGTGCCTCCCGCGA 62.436 66.667 8.23 0.00 42.08 5.87
2674 6049 4.406456 ACCAATACAATGGCAAACTCTCA 58.594 39.130 0.00 0.00 44.75 3.27
2681 6056 1.064003 TGGCAAACTCTCAAGCCCTA 58.936 50.000 0.00 0.00 46.45 3.53
2720 6095 2.102925 CCCACTTTGGTGCAATTCTTGT 59.897 45.455 0.00 0.00 41.75 3.16
2728 6103 1.885887 GTGCAATTCTTGTGGTGGCTA 59.114 47.619 0.00 0.00 0.00 3.93
2747 6122 1.486211 AAGATGTCTACCCCGAGTGG 58.514 55.000 0.00 0.00 0.00 4.00
2756 6131 0.613853 ACCCCGAGTGGAAAGATCGA 60.614 55.000 0.00 0.00 38.72 3.59
2759 6134 0.528684 CCGAGTGGAAAGATCGAGCC 60.529 60.000 0.00 0.00 38.72 4.70
2787 6174 1.693606 CTTGGTGTTTTCCCATTGGCT 59.306 47.619 0.00 0.00 0.00 4.75
2820 6207 4.297768 TCATCTCATGAGTTATGGTCCCA 58.702 43.478 21.92 0.00 37.39 4.37
2828 6215 3.199071 TGAGTTATGGTCCCACATGTACC 59.801 47.826 9.04 9.04 32.39 3.34
2829 6216 2.169769 AGTTATGGTCCCACATGTACCG 59.830 50.000 10.90 0.00 35.98 4.02
2866 6253 5.415221 TCGACATGAACATTATGCACACTA 58.585 37.500 0.00 0.00 0.00 2.74
2876 6263 2.045926 GCACACTAGCACCCTGGG 60.046 66.667 12.28 12.28 0.00 4.45
2890 6277 1.492176 CCCTGGGCAACATATGAGTCT 59.508 52.381 10.38 0.00 39.74 3.24
2893 6280 2.171237 CTGGGCAACATATGAGTCTCCA 59.829 50.000 10.38 9.09 39.74 3.86
2901 6288 3.900601 ACATATGAGTCTCCATCTCCACC 59.099 47.826 10.38 0.00 0.00 4.61
2904 6291 0.741915 GAGTCTCCATCTCCACCGTC 59.258 60.000 0.00 0.00 0.00 4.79
2930 6318 3.269118 TGGTCCATTCTCCCATCAATGAA 59.731 43.478 0.00 0.00 32.56 2.57
2932 6320 4.340381 GGTCCATTCTCCCATCAATGAAAG 59.660 45.833 0.00 0.00 32.56 2.62
2939 6327 2.181975 CCCATCAATGAAAGGTTGCCT 58.818 47.619 4.74 0.00 33.87 4.75
2940 6328 2.093869 CCCATCAATGAAAGGTTGCCTG 60.094 50.000 4.74 0.00 32.13 4.85
2941 6329 2.564062 CCATCAATGAAAGGTTGCCTGT 59.436 45.455 0.00 0.00 32.13 4.00
2958 6350 3.755378 GCCTGTGTTCATCATTCTCTTGT 59.245 43.478 0.00 0.00 0.00 3.16
2990 6382 4.202131 GGGTAAATCTCCTAGTCACTTCCG 60.202 50.000 0.00 0.00 0.00 4.30
3036 6428 5.048504 CCAATGTGCTTAGTTGTGAAGTCAT 60.049 40.000 0.00 0.00 0.00 3.06
3082 6474 4.713814 TGATGTTCTCAGGCTCTACTTCAT 59.286 41.667 0.00 0.00 0.00 2.57
3097 6489 1.129998 CTTCATGCTCGTCAAAGGCAG 59.870 52.381 0.00 0.00 39.38 4.85
3102 6494 4.697756 TCGTCAAAGGCAGCCCCG 62.698 66.667 8.22 3.19 39.21 5.73
3107 6500 1.602323 CAAAGGCAGCCCCGTTACA 60.602 57.895 8.22 0.00 39.21 2.41
3117 6510 2.570302 AGCCCCGTTACACAAGATTACT 59.430 45.455 0.00 0.00 0.00 2.24
3118 6511 3.770933 AGCCCCGTTACACAAGATTACTA 59.229 43.478 0.00 0.00 0.00 1.82
3140 6533 0.684153 CCGAATGCCAATCCCCAAGT 60.684 55.000 0.00 0.00 0.00 3.16
3148 6541 2.885554 GCCAATCCCCAAGTGAGTCATT 60.886 50.000 0.00 0.00 0.00 2.57
3149 6542 2.756760 CCAATCCCCAAGTGAGTCATTG 59.243 50.000 0.00 2.45 0.00 2.82
3168 6561 6.653020 TCATTGTCATACAAAGACATAGCCT 58.347 36.000 0.00 0.00 44.66 4.58
3179 6572 3.903467 AGACATAGCCTTCAAATTCCCC 58.097 45.455 0.00 0.00 0.00 4.81
3181 6574 3.633986 GACATAGCCTTCAAATTCCCCAG 59.366 47.826 0.00 0.00 0.00 4.45
3199 6592 2.495383 CCAGATAGGGGGCTCCATTAGA 60.495 54.545 5.99 0.00 38.24 2.10
3217 6610 2.094675 AGATGGGATTGTTTGCCTTCG 58.905 47.619 0.00 0.00 42.68 3.79
3249 6642 1.875963 GGTGAATCTTGTGCACCGG 59.124 57.895 15.69 0.00 42.20 5.28
3250 6643 1.586154 GGTGAATCTTGTGCACCGGG 61.586 60.000 15.69 4.40 42.20 5.73
3251 6644 1.303236 TGAATCTTGTGCACCGGGG 60.303 57.895 15.69 0.84 0.00 5.73
3279 6672 0.392998 ATGTCCCAACACTCGATGGC 60.393 55.000 0.00 0.00 38.48 4.40
3296 6689 1.674057 GCCCTCATCCCTGGATACG 59.326 63.158 0.00 0.00 42.51 3.06
3301 6694 2.495270 CCTCATCCCTGGATACGATCAG 59.505 54.545 0.00 0.00 42.51 2.90
3308 6701 4.042934 TCCCTGGATACGATCAGATACTCA 59.957 45.833 0.00 0.00 42.51 3.41
3325 6718 6.617371 AGATACTCAACCTGATCTAAATGGGT 59.383 38.462 0.00 0.00 0.00 4.51
3346 6739 1.009675 GCGGGTAAGCGCATCATTG 60.010 57.895 11.47 0.00 0.00 2.82
3353 6746 0.608856 AAGCGCATCATTGTGGGTCA 60.609 50.000 11.47 0.00 34.80 4.02
3355 6748 0.456653 GCGCATCATTGTGGGTCAAC 60.457 55.000 0.30 0.00 38.97 3.18
3356 6749 0.880441 CGCATCATTGTGGGTCAACA 59.120 50.000 0.00 0.00 38.97 3.33
3365 6758 0.383949 GTGGGTCAACAACGTGCATT 59.616 50.000 0.00 0.00 0.00 3.56
3366 6759 0.665835 TGGGTCAACAACGTGCATTC 59.334 50.000 0.00 0.00 0.00 2.67
3388 6781 2.767505 GGCTTACCCAGTATCCGAATG 58.232 52.381 0.00 0.00 0.00 2.67
3398 6791 4.489810 CAGTATCCGAATGCTAGATGTCC 58.510 47.826 0.00 0.00 0.00 4.02
3400 6793 1.687563 TCCGAATGCTAGATGTCCGA 58.312 50.000 0.00 0.00 0.00 4.55
3477 6870 3.028850 CCAATGTCTTGAGCATCCCAAT 58.971 45.455 0.00 0.00 34.04 3.16
3625 7018 1.014044 TTCTTCGAGTGCGCCATCAC 61.014 55.000 4.18 0.00 37.46 3.06
3693 7086 1.137479 AGACCTCGTTTTCACAACGGA 59.863 47.619 7.23 0.00 43.24 4.69
3707 7100 5.459768 TCACAACGGAAATGATGTTCATTG 58.540 37.500 3.65 0.00 45.57 2.82
3716 7109 6.347079 GGAAATGATGTTCATTGTTTGCACTG 60.347 38.462 3.65 0.00 45.57 3.66
3732 7125 1.069823 CACTGCCCTAGATAGCCACAG 59.930 57.143 0.00 0.00 0.00 3.66
3830 7223 4.050934 TGATCACGACGCGCACCT 62.051 61.111 5.73 0.00 0.00 4.00
3898 7291 0.313043 GTTCAGGACACGGTTCTCGA 59.687 55.000 0.00 0.00 42.43 4.04
3899 7292 0.313043 TTCAGGACACGGTTCTCGAC 59.687 55.000 0.00 0.00 42.43 4.20
3900 7293 1.442184 CAGGACACGGTTCTCGACG 60.442 63.158 0.00 0.00 42.43 5.12
3902 7295 0.959372 AGGACACGGTTCTCGACGAT 60.959 55.000 0.00 0.00 42.43 3.73
3917 7311 3.758023 TCGACGATAAGTGAGGGTGTTAA 59.242 43.478 0.00 0.00 0.00 2.01
3951 7345 0.828762 TTGGGGGAAGACTTCGTCGA 60.829 55.000 9.08 0.00 37.67 4.20
3962 7356 1.682854 ACTTCGTCGACCTACCAAACA 59.317 47.619 10.58 0.00 0.00 2.83
3975 7369 4.695455 CCTACCAAACACCACTCAATACTG 59.305 45.833 0.00 0.00 0.00 2.74
4079 7473 1.004277 CGTCAGCAACTCTCGTCCAC 61.004 60.000 0.00 0.00 0.00 4.02
4115 7509 2.795291 AGGGTGGATGATGCTAGGTA 57.205 50.000 0.00 0.00 0.00 3.08
4125 7519 3.653164 TGATGCTAGGTAACCCATCTGA 58.347 45.455 7.13 0.00 37.72 3.27
4130 7524 3.493524 GCTAGGTAACCCATCTGAGAAGC 60.494 52.174 0.00 0.00 37.17 3.86
4135 7529 0.976641 ACCCATCTGAGAAGCGTGAA 59.023 50.000 0.00 0.00 0.00 3.18
4158 7552 1.751927 CCATGCTCACCTTGCCCTC 60.752 63.158 0.00 0.00 0.00 4.30
4178 7572 2.592308 GAGCATCACCTCCACCCC 59.408 66.667 0.00 0.00 33.17 4.95
4189 7584 2.762875 CCACCCCGAGAGTACCCC 60.763 72.222 0.00 0.00 0.00 4.95
4199 7594 2.621055 CGAGAGTACCCCTTGATCTCTG 59.379 54.545 0.00 0.00 35.93 3.35
4216 7611 3.007635 CTCTGATGCTTCAACAGATGCA 58.992 45.455 8.22 8.22 41.19 3.96
4302 7697 0.322456 TCGGCTTCCAAATCAGGTGG 60.322 55.000 0.00 0.00 37.51 4.61
4327 7722 1.952133 CGGTGAAGGCGACGAACAA 60.952 57.895 0.00 0.00 0.00 2.83
4348 7744 1.445238 GAGAGGCTGACACTCGTGC 60.445 63.158 0.00 0.00 39.90 5.34
4356 7752 2.022129 GACACTCGTGCGGAACCAG 61.022 63.158 0.00 0.00 0.00 4.00
4378 7774 4.223700 AGATGCTCTAAAGACCATGTCACA 59.776 41.667 0.00 0.00 34.60 3.58
4401 7797 9.268268 CACAAAACTATTACTCAAAGGACACTA 57.732 33.333 0.00 0.00 0.00 2.74
4419 7815 0.753262 TATCGAGGAAAGCCCAGAGC 59.247 55.000 0.00 0.00 44.25 4.09
4442 7838 1.456705 CCTCTCCTTCTAGGCCGCT 60.457 63.158 0.00 0.00 34.61 5.52
4499 7895 2.158559 TCATGTTTGCCAGCGTGTAAT 58.841 42.857 0.00 0.00 0.00 1.89
4598 7994 0.176680 CTCCATGTTCCCCTCGACAG 59.823 60.000 0.00 0.00 0.00 3.51
4686 8082 4.439901 GAGGGAGGGGGAAGGCCT 62.440 72.222 0.00 0.00 0.00 5.19
4702 8098 0.952984 GCCTGCCCTATCTTCATCGC 60.953 60.000 0.00 0.00 0.00 4.58
4712 8108 4.038042 CCTATCTTCATCGCTACCTGTCAA 59.962 45.833 0.00 0.00 0.00 3.18
4730 8126 2.807967 TCAAAGTCATCTGCTCCAAACG 59.192 45.455 0.00 0.00 0.00 3.60
4734 8130 1.675310 CATCTGCTCCAAACGCCCA 60.675 57.895 0.00 0.00 0.00 5.36
4762 8158 4.821805 GTCATTCTTCTCCCACTGAAAACA 59.178 41.667 0.00 0.00 0.00 2.83
4766 8162 4.855340 TCTTCTCCCACTGAAAACAAAGT 58.145 39.130 0.00 0.00 0.00 2.66
4795 8191 1.149148 GTCCGGAGAAACAGAAGCAC 58.851 55.000 3.06 0.00 0.00 4.40
4796 8192 1.048601 TCCGGAGAAACAGAAGCACT 58.951 50.000 0.00 0.00 0.00 4.40
4810 8206 2.799176 GCACTGGAATAAGGGCAGG 58.201 57.895 0.00 0.00 46.36 4.85
4820 8216 1.435256 TAAGGGCAGGGCTTCCTATC 58.565 55.000 0.00 0.00 39.29 2.08
4887 8283 2.048127 GTCGGCCTTGAAGCGACT 60.048 61.111 15.03 0.00 35.14 4.18
4950 8346 1.006758 TCCGAGTAGTCAACCCTGGAT 59.993 52.381 0.00 0.00 0.00 3.41
4974 8370 7.615582 TCCATCTCAAGTTAAGCAATGTAAG 57.384 36.000 0.00 0.00 0.00 2.34
4986 8382 2.356135 CAATGTAAGCCTAGCCACGTT 58.644 47.619 0.00 0.00 0.00 3.99
5011 8407 1.061546 ACAAGGCGAAGGTTAGGGAA 58.938 50.000 0.00 0.00 0.00 3.97
5027 8423 1.539157 GGAAAGGCTCAGTGGGAAAG 58.461 55.000 0.00 0.00 0.00 2.62
5074 8471 3.252284 CCACCCTGAGCCACCAGT 61.252 66.667 0.00 0.00 32.43 4.00
5097 8494 4.833390 AGGGTGAGTTATAAGCACAAGAC 58.167 43.478 16.12 6.94 34.33 3.01
5174 8584 2.098618 AGGGTATTACCTCCTTCCCG 57.901 55.000 12.54 0.00 38.64 5.14
5206 8616 3.359950 ACTTGGGCAAATCCTCTCATTC 58.640 45.455 0.00 0.00 34.39 2.67
5223 8633 6.283694 TCTCATTCTAACATCTTCCATTCCG 58.716 40.000 0.00 0.00 0.00 4.30
5266 8676 2.697751 CGAACAATCTCTCCATCCTCCT 59.302 50.000 0.00 0.00 0.00 3.69
5274 8684 1.383109 TCCATCCTCCTGACGGCAT 60.383 57.895 0.00 0.00 0.00 4.40
5554 11905 2.234908 GTGGCATCTTCTCTAGTGTGGT 59.765 50.000 0.00 0.00 0.00 4.16
5597 11948 5.006386 GCCTCAAAGGGTATTCATAGGATG 58.994 45.833 0.00 0.00 35.37 3.51
5721 12074 8.717821 CATTACGTTTTAGAGAACTTTCCATCA 58.282 33.333 0.00 0.00 0.00 3.07
5836 12241 8.667463 TCAACATGACATAACAATGTGATACTG 58.333 33.333 0.00 0.00 34.45 2.74
5906 12311 7.156876 TGCCCTAACTAAAGTCATTTCATTG 57.843 36.000 0.00 0.00 0.00 2.82
5970 12393 9.755804 TCATGACTGAGCTACTTCTAATTTATG 57.244 33.333 0.00 0.00 0.00 1.90
6012 12435 3.214328 CAGAATTTAGGCGCCTTGGTAT 58.786 45.455 37.74 19.30 0.00 2.73
6018 12441 1.041437 AGGCGCCTTGGTATAGAGTC 58.959 55.000 27.08 0.00 0.00 3.36
6023 12446 1.755380 GCCTTGGTATAGAGTCGGTGT 59.245 52.381 0.00 0.00 0.00 4.16
6039 12462 5.352293 AGTCGGTGTTAAGAAAGTTTTTCGT 59.648 36.000 0.00 0.00 0.00 3.85
6077 12500 1.066573 CACTGTTCATCCCGAAGAGCT 60.067 52.381 0.00 0.00 46.51 4.09
6134 12557 0.041238 TTGGATCACGGAGGAGGACT 59.959 55.000 0.00 0.00 0.00 3.85
6494 12957 8.099364 TCTGTTTGAATTCTGTTCTGGATAAC 57.901 34.615 7.05 0.00 0.00 1.89
6605 13079 4.159693 AGGTTTCTCCAAAAGGTGTTTCAC 59.840 41.667 0.00 0.00 39.02 3.18
6656 13130 2.945668 GTCTCACAAGCAAGTTCACCTT 59.054 45.455 0.00 0.00 0.00 3.50
6738 13212 9.923143 ATTTACTTGCCCAAAACTTTATACTTC 57.077 29.630 0.00 0.00 0.00 3.01
6804 13278 5.756195 AAATCAATGGTGTATGTCATCCG 57.244 39.130 0.00 0.00 0.00 4.18
6971 13448 0.616395 TTCACCATGGACCGGAGCTA 60.616 55.000 21.47 0.00 0.00 3.32
6978 13455 3.555168 CCATGGACCGGAGCTAAGATAAC 60.555 52.174 9.46 0.00 0.00 1.89
7030 13507 7.477144 TTTGGATCTAACATACAATACTGCG 57.523 36.000 0.00 0.00 0.00 5.18
7033 13510 4.330944 TCTAACATACAATACTGCGGGG 57.669 45.455 0.00 0.00 0.00 5.73
7126 13603 5.235305 AGGATGTCGCACATTTCATTAAC 57.765 39.130 3.76 0.00 39.27 2.01
7260 13738 5.170748 GTTGGAAATTTACATTCAGGCCAG 58.829 41.667 5.01 0.00 0.00 4.85
7413 13892 3.751518 TCTTGGTTTTCTAGTGGAAGGC 58.248 45.455 0.00 0.00 35.16 4.35
7570 14051 4.688511 TTTTATAATGAACCGTTGCGCT 57.311 36.364 9.73 0.00 0.00 5.92
7577 14058 1.337917 TGAACCGTTGCGCTATTGGTA 60.338 47.619 16.40 2.79 31.36 3.25
7590 14071 5.671329 GCGCTATTGGTAAAGAGACAAACTG 60.671 44.000 0.00 0.00 0.00 3.16
7658 14139 5.401550 ACCGTCTGCAAATGATTATGTTTG 58.598 37.500 0.00 0.00 38.13 2.93
7691 14172 4.332543 TGTATTTGCCTTGACGATGATCAC 59.667 41.667 0.00 0.00 0.00 3.06
7782 14265 0.105778 CTTCGGCCTTCCCTCATCTC 59.894 60.000 0.00 0.00 0.00 2.75
7833 14316 8.141268 TCAAGAAATTAGGTGAACCATTTGAAC 58.859 33.333 1.62 0.00 38.89 3.18
7843 14326 6.293735 GGTGAACCATTTGAACGATGTTTCTA 60.294 38.462 0.00 0.00 30.17 2.10
7845 14328 5.880054 ACCATTTGAACGATGTTTCTAGG 57.120 39.130 0.00 0.00 0.00 3.02
7897 14380 3.687212 TGTGTTCGTAATTGCCCTGTATG 59.313 43.478 0.00 0.00 0.00 2.39
7907 14390 3.643199 TGCCCTGTATGTTAGCAATGA 57.357 42.857 0.00 0.00 0.00 2.57
7946 14429 1.438651 GCCATGTGCTTCGTTGTCTA 58.561 50.000 0.00 0.00 36.87 2.59
8018 14501 3.753815 TGTCAAATGACCTGAAGCATCA 58.246 40.909 10.83 0.00 44.15 3.07
8038 14521 1.421646 AGAACCAAGAACCCTCACCTG 59.578 52.381 0.00 0.00 0.00 4.00
8042 14525 2.243736 ACCAAGAACCCTCACCTGAAAA 59.756 45.455 0.00 0.00 0.00 2.29
8074 14557 0.954452 AGGAAGCAAAGCAAACCGAG 59.046 50.000 0.00 0.00 0.00 4.63
8099 14582 1.003051 ATTAGTCCTGGGGGAGCGT 59.997 57.895 0.00 0.00 43.12 5.07
8100 14583 1.338136 ATTAGTCCTGGGGGAGCGTG 61.338 60.000 0.00 0.00 43.12 5.34
8101 14584 2.449967 TTAGTCCTGGGGGAGCGTGA 62.450 60.000 0.00 0.00 43.12 4.35
8102 14585 2.238319 TAGTCCTGGGGGAGCGTGAT 62.238 60.000 0.00 0.00 43.12 3.06
8103 14586 3.083349 TCCTGGGGGAGCGTGATG 61.083 66.667 0.00 0.00 36.57 3.07
8104 14587 3.402681 CCTGGGGGAGCGTGATGT 61.403 66.667 0.00 0.00 33.58 3.06
8105 14588 2.187946 CTGGGGGAGCGTGATGTC 59.812 66.667 0.00 0.00 0.00 3.06
8106 14589 3.723235 CTGGGGGAGCGTGATGTCG 62.723 68.421 0.00 0.00 0.00 4.35
8116 14599 2.217353 CGTGATGTCGCTTGAAACTG 57.783 50.000 0.00 0.00 0.00 3.16
8117 14600 1.722751 CGTGATGTCGCTTGAAACTGC 60.723 52.381 0.00 0.00 0.00 4.40
8128 14611 6.230460 CGCTTGAAACTGCGTTATTATTTC 57.770 37.500 0.00 0.00 46.09 2.17
8129 14612 5.227184 CGCTTGAAACTGCGTTATTATTTCC 59.773 40.000 0.00 0.00 46.09 3.13
8130 14613 5.515270 GCTTGAAACTGCGTTATTATTTCCC 59.485 40.000 0.00 0.00 0.00 3.97
8131 14614 5.570234 TGAAACTGCGTTATTATTTCCCC 57.430 39.130 0.00 0.00 0.00 4.81
8132 14615 5.010933 TGAAACTGCGTTATTATTTCCCCA 58.989 37.500 0.00 0.00 0.00 4.96
8133 14616 5.477291 TGAAACTGCGTTATTATTTCCCCAA 59.523 36.000 0.00 0.00 0.00 4.12
8134 14617 5.986501 AACTGCGTTATTATTTCCCCAAA 57.013 34.783 0.00 0.00 0.00 3.28
8135 14618 5.576447 ACTGCGTTATTATTTCCCCAAAG 57.424 39.130 0.00 0.00 0.00 2.77
8136 14619 5.258051 ACTGCGTTATTATTTCCCCAAAGA 58.742 37.500 0.00 0.00 0.00 2.52
8137 14620 5.357032 ACTGCGTTATTATTTCCCCAAAGAG 59.643 40.000 0.00 0.00 0.00 2.85
8138 14621 4.642885 TGCGTTATTATTTCCCCAAAGAGG 59.357 41.667 0.00 0.00 37.03 3.69
8139 14622 4.885325 GCGTTATTATTTCCCCAAAGAGGA 59.115 41.667 0.00 0.00 41.22 3.71
8140 14623 5.358725 GCGTTATTATTTCCCCAAAGAGGAA 59.641 40.000 0.00 0.00 41.69 3.36
8141 14624 6.459710 GCGTTATTATTTCCCCAAAGAGGAAG 60.460 42.308 0.00 0.00 44.07 3.46
8142 14625 6.039382 CGTTATTATTTCCCCAAAGAGGAAGG 59.961 42.308 0.00 0.00 44.07 3.46
8143 14626 2.928036 ATTTCCCCAAAGAGGAAGGG 57.072 50.000 0.00 0.00 44.07 3.95
8145 14628 3.858475 TCCCCAAAGAGGAAGGGAT 57.142 52.632 0.00 0.00 43.81 3.85
8146 14629 1.298953 TCCCCAAAGAGGAAGGGATG 58.701 55.000 0.00 0.00 43.81 3.51
8147 14630 1.203557 TCCCCAAAGAGGAAGGGATGA 60.204 52.381 0.00 0.00 43.81 2.92
8148 14631 1.855599 CCCCAAAGAGGAAGGGATGAT 59.144 52.381 0.00 0.00 45.80 2.45
8149 14632 2.423947 CCCCAAAGAGGAAGGGATGATG 60.424 54.545 0.00 0.00 45.80 3.07
8150 14633 2.305009 CCAAAGAGGAAGGGATGATGC 58.695 52.381 0.00 0.00 41.22 3.91
8151 14634 2.357465 CCAAAGAGGAAGGGATGATGCA 60.357 50.000 0.00 0.00 41.22 3.96
8152 14635 2.950309 CAAAGAGGAAGGGATGATGCAG 59.050 50.000 0.00 0.00 0.00 4.41
8153 14636 1.890552 AGAGGAAGGGATGATGCAGT 58.109 50.000 0.00 0.00 0.00 4.40
8154 14637 3.051940 AGAGGAAGGGATGATGCAGTA 57.948 47.619 0.00 0.00 0.00 2.74
8155 14638 3.596101 AGAGGAAGGGATGATGCAGTAT 58.404 45.455 0.00 0.00 0.00 2.12
8156 14639 4.756564 AGAGGAAGGGATGATGCAGTATA 58.243 43.478 0.00 0.00 0.00 1.47
8157 14640 4.776837 AGAGGAAGGGATGATGCAGTATAG 59.223 45.833 0.00 0.00 0.00 1.31
8158 14641 3.262915 AGGAAGGGATGATGCAGTATAGC 59.737 47.826 0.00 0.00 0.00 2.97
8159 14642 3.262915 GGAAGGGATGATGCAGTATAGCT 59.737 47.826 0.00 0.00 34.99 3.32
8160 14643 4.467795 GGAAGGGATGATGCAGTATAGCTA 59.532 45.833 0.00 0.00 34.99 3.32
8161 14644 5.413309 AAGGGATGATGCAGTATAGCTAC 57.587 43.478 0.00 0.00 34.99 3.58
8162 14645 3.445450 AGGGATGATGCAGTATAGCTACG 59.555 47.826 0.00 0.00 34.99 3.51
8163 14646 3.429547 GGGATGATGCAGTATAGCTACGG 60.430 52.174 0.00 0.00 34.99 4.02
8164 14647 3.193691 GGATGATGCAGTATAGCTACGGT 59.806 47.826 0.00 0.00 34.99 4.83
8165 14648 4.398358 GGATGATGCAGTATAGCTACGGTA 59.602 45.833 0.00 0.00 34.99 4.02
8166 14649 5.449314 GGATGATGCAGTATAGCTACGGTAG 60.449 48.000 10.83 10.83 34.99 3.18
8167 14650 3.756963 TGATGCAGTATAGCTACGGTAGG 59.243 47.826 16.43 0.00 34.99 3.18
8168 14651 3.219176 TGCAGTATAGCTACGGTAGGT 57.781 47.619 21.95 21.95 40.14 3.08
8169 14652 4.356405 TGCAGTATAGCTACGGTAGGTA 57.644 45.455 24.43 24.43 42.29 3.08
8171 14654 5.319453 TGCAGTATAGCTACGGTAGGTATT 58.681 41.667 32.64 19.84 44.56 1.89
8172 14655 5.771666 TGCAGTATAGCTACGGTAGGTATTT 59.228 40.000 32.64 22.64 44.56 1.40
8173 14656 6.072286 TGCAGTATAGCTACGGTAGGTATTTC 60.072 42.308 32.64 26.15 44.56 2.17
8174 14657 6.624642 GCAGTATAGCTACGGTAGGTATTTCC 60.625 46.154 32.64 23.41 44.56 3.13
8175 14658 5.948758 AGTATAGCTACGGTAGGTATTTCCC 59.051 44.000 32.64 21.70 44.56 3.97
8176 14659 3.325359 AGCTACGGTAGGTATTTCCCT 57.675 47.619 17.61 0.45 38.70 4.20
8177 14660 3.229293 AGCTACGGTAGGTATTTCCCTC 58.771 50.000 17.61 0.00 35.97 4.30
8178 14661 2.961062 GCTACGGTAGGTATTTCCCTCA 59.039 50.000 16.43 0.00 35.97 3.86
8179 14662 3.005578 GCTACGGTAGGTATTTCCCTCAG 59.994 52.174 16.43 0.00 35.97 3.35
8180 14663 3.111741 ACGGTAGGTATTTCCCTCAGT 57.888 47.619 0.00 0.00 35.97 3.41
8181 14664 3.447950 ACGGTAGGTATTTCCCTCAGTT 58.552 45.455 0.00 0.00 35.97 3.16
8182 14665 3.197116 ACGGTAGGTATTTCCCTCAGTTG 59.803 47.826 0.00 0.00 35.97 3.16
8183 14666 3.197116 CGGTAGGTATTTCCCTCAGTTGT 59.803 47.826 0.00 0.00 35.97 3.32
8184 14667 4.514401 GGTAGGTATTTCCCTCAGTTGTG 58.486 47.826 0.00 0.00 35.97 3.33
8185 14668 4.224370 GGTAGGTATTTCCCTCAGTTGTGA 59.776 45.833 0.00 0.00 35.97 3.58
8186 14669 4.993705 AGGTATTTCCCTCAGTTGTGAA 57.006 40.909 0.00 0.00 36.75 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
84 89 1.670811 GTGCCGATGGTTCAATGGTAG 59.329 52.381 0.00 0.00 0.00 3.18
119 124 2.440539 ACACGTCTCAACATGTCTCC 57.559 50.000 0.00 0.00 20.59 3.71
120 125 3.604772 GCAAACACGTCTCAACATGTCTC 60.605 47.826 0.00 0.00 28.77 3.36
181 186 1.963515 AGCGCACCTTTCTTTTCCAAT 59.036 42.857 11.47 0.00 0.00 3.16
202 209 7.473735 TCCTCTCATCGCAAATCTATCTTAT 57.526 36.000 0.00 0.00 0.00 1.73
267 274 2.416747 CAAGATGACACTTGCTCGGAA 58.583 47.619 0.00 0.00 40.24 4.30
268 275 2.084610 CAAGATGACACTTGCTCGGA 57.915 50.000 0.00 0.00 40.24 4.55
299 315 1.603455 CCCCTCGGCACACAAACAT 60.603 57.895 0.00 0.00 0.00 2.71
441 469 2.096980 TGTGGATCGCTGTAGTCTTACG 59.903 50.000 0.00 0.00 32.21 3.18
536 565 7.329226 CGGCACTTGATCACTTGAATTATTTTT 59.671 33.333 0.00 0.00 0.00 1.94
537 566 6.808212 CGGCACTTGATCACTTGAATTATTTT 59.192 34.615 0.00 0.00 0.00 1.82
538 567 6.324819 CGGCACTTGATCACTTGAATTATTT 58.675 36.000 0.00 0.00 0.00 1.40
539 568 5.163622 CCGGCACTTGATCACTTGAATTATT 60.164 40.000 0.00 0.00 0.00 1.40
540 569 4.336433 CCGGCACTTGATCACTTGAATTAT 59.664 41.667 0.00 0.00 0.00 1.28
541 570 3.689161 CCGGCACTTGATCACTTGAATTA 59.311 43.478 0.00 0.00 0.00 1.40
542 571 2.489329 CCGGCACTTGATCACTTGAATT 59.511 45.455 0.00 0.00 0.00 2.17
543 572 2.086869 CCGGCACTTGATCACTTGAAT 58.913 47.619 0.00 0.00 0.00 2.57
544 573 1.522668 CCGGCACTTGATCACTTGAA 58.477 50.000 0.00 0.00 0.00 2.69
545 574 0.321564 CCCGGCACTTGATCACTTGA 60.322 55.000 0.00 0.00 0.00 3.02
546 575 1.926511 GCCCGGCACTTGATCACTTG 61.927 60.000 3.91 0.00 0.00 3.16
547 576 1.675641 GCCCGGCACTTGATCACTT 60.676 57.895 3.91 0.00 0.00 3.16
581 610 9.186323 CCTTACTCGATAGTGATGTTATTTCAG 57.814 37.037 0.00 0.00 36.36 3.02
602 637 2.116366 CTTTGTTTGCACGCACCTTAC 58.884 47.619 0.00 0.00 0.00 2.34
604 639 0.814457 TCTTTGTTTGCACGCACCTT 59.186 45.000 0.00 0.00 0.00 3.50
611 646 4.297510 TGCACATGTATCTTTGTTTGCAC 58.702 39.130 0.00 0.00 0.00 4.57
618 653 2.751259 ACAGGCTGCACATGTATCTTTG 59.249 45.455 15.89 0.00 0.00 2.77
621 656 1.407851 CCACAGGCTGCACATGTATCT 60.408 52.381 15.89 0.00 0.00 1.98
623 658 1.033746 GCCACAGGCTGCACATGTAT 61.034 55.000 15.89 0.00 46.69 2.29
624 659 1.675310 GCCACAGGCTGCACATGTA 60.675 57.895 15.89 0.00 46.69 2.29
635 670 1.665735 CGGACGAAATTTTGCCACAGG 60.666 52.381 5.27 0.00 0.00 4.00
637 672 0.312416 CCGGACGAAATTTTGCCACA 59.688 50.000 0.00 0.00 0.00 4.17
638 673 0.594110 TCCGGACGAAATTTTGCCAC 59.406 50.000 0.00 0.00 0.00 5.01
639 674 0.878416 CTCCGGACGAAATTTTGCCA 59.122 50.000 0.00 0.00 0.00 4.92
640 675 0.456142 GCTCCGGACGAAATTTTGCC 60.456 55.000 0.00 7.01 0.00 4.52
641 676 0.456142 GGCTCCGGACGAAATTTTGC 60.456 55.000 0.00 0.00 0.00 3.68
642 677 3.694889 GGCTCCGGACGAAATTTTG 57.305 52.632 0.00 3.73 0.00 2.44
664 854 1.152819 CCTGGTGCATGCATAGGCT 60.153 57.895 29.50 0.00 41.91 4.58
668 858 0.747644 CGTTCCCTGGTGCATGCATA 60.748 55.000 25.64 15.15 0.00 3.14
669 859 2.048023 CGTTCCCTGGTGCATGCAT 61.048 57.895 25.64 0.00 0.00 3.96
683 873 4.573162 CCTCGTGAGGGTTCGTTC 57.427 61.111 8.09 0.00 44.87 3.95
768 958 1.790387 GCAGTGATGTTGCGAGTCC 59.210 57.895 0.00 0.00 0.00 3.85
774 964 1.978782 GCTTTAACGCAGTGATGTTGC 59.021 47.619 10.44 3.54 45.00 4.17
775 965 3.058983 TCAGCTTTAACGCAGTGATGTTG 60.059 43.478 6.72 0.00 45.00 3.33
776 966 3.138304 TCAGCTTTAACGCAGTGATGTT 58.862 40.909 6.72 0.00 45.00 2.71
777 967 2.738846 CTCAGCTTTAACGCAGTGATGT 59.261 45.455 6.72 0.00 45.00 3.06
778 968 2.738846 ACTCAGCTTTAACGCAGTGATG 59.261 45.455 6.72 0.00 45.00 3.07
779 969 2.996621 GACTCAGCTTTAACGCAGTGAT 59.003 45.455 6.72 0.00 45.00 3.06
780 970 2.404215 GACTCAGCTTTAACGCAGTGA 58.596 47.619 6.72 1.61 45.00 3.41
781 971 1.125021 CGACTCAGCTTTAACGCAGTG 59.875 52.381 6.72 2.06 45.00 3.66
783 973 0.093705 GCGACTCAGCTTTAACGCAG 59.906 55.000 16.39 0.00 44.29 5.18
795 985 0.942410 GTTGCGTGTTAGGCGACTCA 60.942 55.000 0.00 0.00 43.67 3.41
821 1012 1.761198 GTTAAGAGGGCGACATAGGGT 59.239 52.381 0.00 0.00 0.00 4.34
823 1014 3.118738 ACTTGTTAAGAGGGCGACATAGG 60.119 47.826 0.00 0.00 0.00 2.57
876 1067 1.289380 CCGGACCGCTCTATAAGGC 59.711 63.158 8.86 0.00 0.00 4.35
967 2725 4.129737 CGGTGCCGGACTGACGAT 62.130 66.667 5.05 0.00 35.47 3.73
1516 4471 5.531122 TGATTTATTGACCTAGACGGAGG 57.469 43.478 0.00 0.00 42.89 4.30
1520 4475 6.475727 ACACGAATGATTTATTGACCTAGACG 59.524 38.462 0.00 0.00 0.00 4.18
1521 4476 7.772332 ACACGAATGATTTATTGACCTAGAC 57.228 36.000 0.00 0.00 0.00 2.59
1522 4477 8.692710 ACTACACGAATGATTTATTGACCTAGA 58.307 33.333 0.00 0.00 0.00 2.43
1523 4478 8.873215 ACTACACGAATGATTTATTGACCTAG 57.127 34.615 0.00 0.00 0.00 3.02
1524 4479 9.309516 GAACTACACGAATGATTTATTGACCTA 57.690 33.333 0.00 0.00 0.00 3.08
1525 4480 8.041323 AGAACTACACGAATGATTTATTGACCT 58.959 33.333 0.00 0.00 0.00 3.85
1526 4481 8.197988 AGAACTACACGAATGATTTATTGACC 57.802 34.615 0.00 0.00 0.00 4.02
1533 4488 9.823647 AATGATCTAGAACTACACGAATGATTT 57.176 29.630 0.00 0.00 0.00 2.17
1534 4489 9.254133 CAATGATCTAGAACTACACGAATGATT 57.746 33.333 0.00 0.00 0.00 2.57
1535 4490 8.633561 TCAATGATCTAGAACTACACGAATGAT 58.366 33.333 0.00 0.00 0.00 2.45
1536 4491 7.996385 TCAATGATCTAGAACTACACGAATGA 58.004 34.615 0.00 0.00 0.00 2.57
1537 4492 8.809159 ATCAATGATCTAGAACTACACGAATG 57.191 34.615 0.00 0.00 0.00 2.67
1538 4493 9.823647 AAATCAATGATCTAGAACTACACGAAT 57.176 29.630 0.00 0.00 0.00 3.34
1540 4495 9.952188 CTAAATCAATGATCTAGAACTACACGA 57.048 33.333 0.00 0.00 0.00 4.35
1541 4496 9.952188 TCTAAATCAATGATCTAGAACTACACG 57.048 33.333 3.94 0.00 0.00 4.49
1664 4619 9.988350 CGTAGTTCTAGGTTAACGATTTAACTA 57.012 33.333 8.14 7.17 44.55 2.24
1665 4620 7.486232 GCGTAGTTCTAGGTTAACGATTTAACT 59.514 37.037 11.15 13.14 44.55 2.24
1666 4621 7.512119 CGCGTAGTTCTAGGTTAACGATTTAAC 60.512 40.741 0.00 0.00 44.46 2.01
1667 4622 6.468956 CGCGTAGTTCTAGGTTAACGATTTAA 59.531 38.462 0.00 0.00 32.35 1.52
1668 4623 5.965334 CGCGTAGTTCTAGGTTAACGATTTA 59.035 40.000 0.00 0.00 32.35 1.40
1669 4624 4.795278 CGCGTAGTTCTAGGTTAACGATTT 59.205 41.667 0.00 0.00 32.35 2.17
1670 4625 4.094887 TCGCGTAGTTCTAGGTTAACGATT 59.905 41.667 5.77 0.00 32.35 3.34
1671 4626 3.623060 TCGCGTAGTTCTAGGTTAACGAT 59.377 43.478 5.77 0.00 32.35 3.73
1672 4627 3.000041 TCGCGTAGTTCTAGGTTAACGA 59.000 45.455 5.77 0.00 32.35 3.85
1673 4628 3.389687 TCGCGTAGTTCTAGGTTAACG 57.610 47.619 5.77 0.00 32.00 3.18
1674 4629 4.475944 TGTTCGCGTAGTTCTAGGTTAAC 58.524 43.478 5.77 0.00 0.00 2.01
1675 4630 4.764679 TGTTCGCGTAGTTCTAGGTTAA 57.235 40.909 5.77 0.00 0.00 2.01
1676 4631 4.216257 AGTTGTTCGCGTAGTTCTAGGTTA 59.784 41.667 5.77 0.00 0.00 2.85
1677 4632 3.005155 AGTTGTTCGCGTAGTTCTAGGTT 59.995 43.478 5.77 0.00 0.00 3.50
1678 4633 2.555757 AGTTGTTCGCGTAGTTCTAGGT 59.444 45.455 5.77 0.00 0.00 3.08
1679 4634 3.213249 AGTTGTTCGCGTAGTTCTAGG 57.787 47.619 5.77 0.00 0.00 3.02
1680 4635 6.525628 TGAATAAGTTGTTCGCGTAGTTCTAG 59.474 38.462 5.77 0.00 0.00 2.43
1681 4636 6.380995 TGAATAAGTTGTTCGCGTAGTTCTA 58.619 36.000 5.77 0.00 0.00 2.10
1682 4637 5.224888 TGAATAAGTTGTTCGCGTAGTTCT 58.775 37.500 5.77 0.00 0.00 3.01
1683 4638 5.505165 TGAATAAGTTGTTCGCGTAGTTC 57.495 39.130 5.77 0.29 0.00 3.01
1684 4639 5.636121 TGATGAATAAGTTGTTCGCGTAGTT 59.364 36.000 5.77 2.52 0.00 2.24
1685 4640 5.165676 TGATGAATAAGTTGTTCGCGTAGT 58.834 37.500 5.77 0.00 0.00 2.73
1686 4641 5.696260 TGATGAATAAGTTGTTCGCGTAG 57.304 39.130 5.77 0.00 0.00 3.51
1687 4642 5.865013 TCTTGATGAATAAGTTGTTCGCGTA 59.135 36.000 5.77 0.00 0.00 4.42
1688 4643 4.688879 TCTTGATGAATAAGTTGTTCGCGT 59.311 37.500 5.77 0.00 0.00 6.01
1689 4644 5.015733 GTCTTGATGAATAAGTTGTTCGCG 58.984 41.667 0.00 0.00 0.00 5.87
1690 4645 6.170675 AGTCTTGATGAATAAGTTGTTCGC 57.829 37.500 7.72 3.65 0.00 4.70
1691 4646 8.467402 ACTAGTCTTGATGAATAAGTTGTTCG 57.533 34.615 7.72 0.00 0.00 3.95
1746 4701 4.948847 TGATGCATATATACGGCTCATCC 58.051 43.478 0.00 0.00 0.00 3.51
1749 4704 7.346751 TCTAATGATGCATATATACGGCTCA 57.653 36.000 0.00 9.68 0.00 4.26
1783 4738 4.382901 GGGATTGGATTTGCATGCTTTACA 60.383 41.667 20.33 7.57 0.00 2.41
1787 4742 1.487558 GGGGATTGGATTTGCATGCTT 59.512 47.619 20.33 3.46 0.00 3.91
1813 4773 3.555966 CCAGGATCCTTAATTGGGTCAC 58.444 50.000 13.00 0.00 38.94 3.67
1860 4823 8.656849 CATTACTTTGGTTGTACTGATCTGTAC 58.343 37.037 27.16 27.16 42.10 2.90
1873 4845 9.540431 CTTGTTTGTTTTTCATTACTTTGGTTG 57.460 29.630 0.00 0.00 0.00 3.77
1885 4857 7.386851 TGTTTATGGTCCTTGTTTGTTTTTCA 58.613 30.769 0.00 0.00 0.00 2.69
1886 4858 7.835634 TGTTTATGGTCCTTGTTTGTTTTTC 57.164 32.000 0.00 0.00 0.00 2.29
1922 5228 3.403038 ACTGTTGTATGTGGAGCAGTTC 58.597 45.455 0.00 0.00 34.02 3.01
1952 5258 4.024556 GGATTGCTTGATGGTACGAAGATG 60.025 45.833 0.00 0.00 0.00 2.90
1987 5293 1.552348 GACGTCCGCTGCATATGCTC 61.552 60.000 27.13 17.55 42.66 4.26
1996 5302 1.421485 GCATTTGAGACGTCCGCTG 59.579 57.895 13.01 4.49 0.00 5.18
1997 5303 1.741770 GGCATTTGAGACGTCCGCT 60.742 57.895 13.01 0.00 0.00 5.52
2020 5327 2.125673 CAGTAACCGGGCCGTCTG 60.126 66.667 26.32 21.09 0.00 3.51
2038 5345 4.737601 CGAATTTTCGTGACCGGC 57.262 55.556 0.00 0.00 45.09 6.13
2046 5353 3.567703 GCCTACCTGGGTCGAATTTTCG 61.568 54.545 6.37 6.37 43.31 3.46
2057 5364 1.743772 CGTTTGATGAGCCTACCTGGG 60.744 57.143 0.00 0.00 36.00 4.45
2100 5417 5.365619 ACACCCCATATTTGAACTCGATAC 58.634 41.667 0.00 0.00 0.00 2.24
2105 5422 2.943033 CGGACACCCCATATTTGAACTC 59.057 50.000 0.00 0.00 34.14 3.01
2108 5425 1.064314 CCCGGACACCCCATATTTGAA 60.064 52.381 0.73 0.00 34.14 2.69
2165 5493 4.273148 AGAAATATATGTGGGGTCGAGC 57.727 45.455 5.93 5.93 0.00 5.03
2184 5512 2.347490 GGCAAGCGAGTGGGAAGA 59.653 61.111 0.00 0.00 0.00 2.87
2196 5524 4.659172 TGGGCTTGGTCCGGCAAG 62.659 66.667 15.29 15.29 0.00 4.01
2198 5526 4.659172 CTTGGGCTTGGTCCGGCA 62.659 66.667 0.00 0.00 0.00 5.69
2209 5537 1.973812 GGAGTGAAGTGGCTTGGGC 60.974 63.158 0.00 0.00 37.82 5.36
2213 5541 0.398318 GGAGTGGAGTGAAGTGGCTT 59.602 55.000 0.00 0.00 0.00 4.35
2252 5585 2.202892 GTTGGAGATCGCCGGACC 60.203 66.667 5.05 0.00 0.00 4.46
2326 5659 3.758088 GAGCGGCGAATGAGCTCGA 62.758 63.158 12.98 0.00 46.14 4.04
2351 5724 1.153489 CTGCCTCACATGGGTCTCG 60.153 63.158 0.00 0.00 0.00 4.04
2352 5725 1.451028 GCTGCCTCACATGGGTCTC 60.451 63.158 0.00 0.00 0.00 3.36
2355 5728 3.196207 AACGCTGCCTCACATGGGT 62.196 57.895 0.00 0.00 0.00 4.51
2359 5732 2.434884 CCGAACGCTGCCTCACAT 60.435 61.111 0.00 0.00 0.00 3.21
2362 5735 3.282745 GAGTCCGAACGCTGCCTCA 62.283 63.158 0.00 0.00 0.00 3.86
2368 5741 2.971452 GGAAGGAGTCCGAACGCT 59.029 61.111 2.76 0.00 36.40 5.07
2390 5763 0.608035 TTGGGGCTTGTCGAACATCC 60.608 55.000 0.00 0.00 0.00 3.51
2391 5764 1.243902 TTTGGGGCTTGTCGAACATC 58.756 50.000 0.00 0.00 0.00 3.06
2468 5841 3.050275 GGCCCGTGAAGTCTGCAC 61.050 66.667 0.12 0.12 0.00 4.57
2552 5927 4.404098 ACCATCCCGGGTGAACGC 62.404 66.667 22.86 0.00 40.44 4.84
2628 6003 0.527565 GGTGCTACGTCGACCCTTTA 59.472 55.000 10.58 0.00 0.00 1.85
2629 6004 1.291272 GGTGCTACGTCGACCCTTT 59.709 57.895 10.58 0.00 0.00 3.11
2681 6056 2.357836 CCCATGCACCAGGAGCTT 59.642 61.111 10.54 0.54 0.00 3.74
2720 6095 2.116238 GGGTAGACATCTTAGCCACCA 58.884 52.381 1.28 0.00 0.00 4.17
2728 6103 1.006758 TCCACTCGGGGTAGACATCTT 59.993 52.381 0.00 0.00 37.22 2.40
2759 6134 2.289010 GGGAAAACACCAAGCCTCATTG 60.289 50.000 0.00 0.00 0.00 2.82
2787 6174 2.918934 TCATGAGATGAGGGGTTCCAAA 59.081 45.455 0.00 0.00 33.59 3.28
2809 6196 2.168936 TCGGTACATGTGGGACCATAAC 59.831 50.000 15.03 0.00 32.39 1.89
2813 6200 0.539518 CATCGGTACATGTGGGACCA 59.460 55.000 15.03 4.55 32.39 4.02
2818 6205 2.620251 ACATCCATCGGTACATGTGG 57.380 50.000 9.11 0.00 0.00 4.17
2820 6207 2.632996 CCCTACATCCATCGGTACATGT 59.367 50.000 2.69 2.69 33.95 3.21
2828 6215 1.886542 TGTCGATCCCTACATCCATCG 59.113 52.381 0.00 0.00 39.60 3.84
2829 6216 3.511540 TCATGTCGATCCCTACATCCATC 59.488 47.826 0.00 0.00 34.12 3.51
2866 6253 0.396139 CATATGTTGCCCAGGGTGCT 60.396 55.000 7.55 0.00 0.00 4.40
2874 6261 3.072184 AGATGGAGACTCATATGTTGCCC 59.928 47.826 4.53 0.50 0.00 5.36
2876 6263 4.202295 TGGAGATGGAGACTCATATGTTGC 60.202 45.833 4.53 0.00 36.26 4.17
2890 6277 0.459899 CAATCGACGGTGGAGATGGA 59.540 55.000 0.00 0.00 0.00 3.41
2893 6280 0.460311 GACCAATCGACGGTGGAGAT 59.540 55.000 20.89 3.38 36.69 2.75
2901 6288 1.571919 GGAGAATGGACCAATCGACG 58.428 55.000 0.00 0.00 0.00 5.12
2904 6291 2.158769 TGATGGGAGAATGGACCAATCG 60.159 50.000 0.00 0.00 38.93 3.34
2930 6318 2.363306 TGATGAACACAGGCAACCTT 57.637 45.000 0.00 0.00 37.17 3.50
2932 6320 2.821969 AGAATGATGAACACAGGCAACC 59.178 45.455 0.00 0.00 37.17 3.77
2939 6327 4.999311 CAGGACAAGAGAATGATGAACACA 59.001 41.667 0.00 0.00 0.00 3.72
2940 6328 4.394300 CCAGGACAAGAGAATGATGAACAC 59.606 45.833 0.00 0.00 0.00 3.32
2941 6329 4.566278 CCCAGGACAAGAGAATGATGAACA 60.566 45.833 0.00 0.00 0.00 3.18
2958 6350 2.047296 AGGAGATTTACCCTTCCCAGGA 59.953 50.000 0.00 0.00 44.19 3.86
2990 6382 0.598680 CATCAGTAGCCTAGCACGCC 60.599 60.000 0.00 0.00 0.00 5.68
3036 6428 1.136961 TACCCACCCTGGCATGTTCA 61.137 55.000 0.00 0.00 35.79 3.18
3070 6462 1.135139 TGACGAGCATGAAGTAGAGCC 59.865 52.381 0.00 0.00 0.00 4.70
3082 6474 2.669569 GGCTGCCTTTGACGAGCA 60.670 61.111 12.43 0.00 32.83 4.26
3097 6489 2.981898 AGTAATCTTGTGTAACGGGGC 58.018 47.619 0.00 0.00 42.39 5.80
3102 6494 8.062448 GCATTCGGAATAGTAATCTTGTGTAAC 58.938 37.037 2.35 0.00 37.35 2.50
3107 6500 5.680619 TGGCATTCGGAATAGTAATCTTGT 58.319 37.500 2.35 0.00 0.00 3.16
3117 6510 1.496857 TGGGGATTGGCATTCGGAATA 59.503 47.619 2.35 0.00 0.00 1.75
3118 6511 0.261402 TGGGGATTGGCATTCGGAAT 59.739 50.000 0.00 0.00 0.00 3.01
3148 6541 6.048732 TGAAGGCTATGTCTTTGTATGACA 57.951 37.500 0.00 0.00 46.58 3.58
3149 6542 6.985188 TTGAAGGCTATGTCTTTGTATGAC 57.015 37.500 0.00 0.00 35.21 3.06
3179 6572 2.907892 TCTAATGGAGCCCCCTATCTG 58.092 52.381 0.00 0.00 35.38 2.90
3181 6574 3.922171 CATCTAATGGAGCCCCCTATC 57.078 52.381 0.00 0.00 35.38 2.08
3199 6592 1.185315 CCGAAGGCAAACAATCCCAT 58.815 50.000 0.00 0.00 46.14 4.00
3227 6620 0.238289 GTGCACAAGATTCACCCACG 59.762 55.000 13.17 0.00 0.00 4.94
3228 6621 0.598065 GGTGCACAAGATTCACCCAC 59.402 55.000 20.43 0.00 43.27 4.61
3279 6672 1.827969 GATCGTATCCAGGGATGAGGG 59.172 57.143 11.08 0.00 36.17 4.30
3289 6682 5.241728 CAGGTTGAGTATCTGATCGTATCCA 59.758 44.000 0.00 0.00 34.92 3.41
3301 6694 6.831976 ACCCATTTAGATCAGGTTGAGTATC 58.168 40.000 0.00 0.00 0.00 2.24
3308 6701 4.451900 CGCTTACCCATTTAGATCAGGTT 58.548 43.478 0.00 0.00 31.89 3.50
3346 6739 0.383949 AATGCACGTTGTTGACCCAC 59.616 50.000 0.00 0.00 0.00 4.61
3353 6746 1.452145 AAGCCCGAATGCACGTTGTT 61.452 50.000 0.00 0.00 0.00 2.83
3355 6748 0.179200 GTAAGCCCGAATGCACGTTG 60.179 55.000 0.00 0.00 0.00 4.10
3356 6749 1.303091 GGTAAGCCCGAATGCACGTT 61.303 55.000 0.00 0.00 0.00 3.99
3380 6773 2.239400 TCGGACATCTAGCATTCGGAT 58.761 47.619 0.00 0.00 0.00 4.18
3384 6777 2.229062 TCCGATCGGACATCTAGCATTC 59.771 50.000 32.59 0.00 39.76 2.67
3387 6780 3.414486 TCCGATCGGACATCTAGCA 57.586 52.632 32.59 7.58 39.76 3.49
3398 6791 6.309009 CCTTTCACTCATAATGTATCCGATCG 59.691 42.308 8.51 8.51 0.00 3.69
3400 6793 6.467677 CCCTTTCACTCATAATGTATCCGAT 58.532 40.000 0.00 0.00 0.00 4.18
3409 6802 5.340027 CCCACTTACCCCTTTCACTCATAAT 60.340 44.000 0.00 0.00 0.00 1.28
3416 6809 2.670019 AACCCACTTACCCCTTTCAC 57.330 50.000 0.00 0.00 0.00 3.18
3477 6870 1.635817 CCTTAGCCCCTAGCCAGCAA 61.636 60.000 0.00 0.00 45.47 3.91
3504 6897 2.428890 ACGAAGATGTAGCTTCTCAGGG 59.571 50.000 8.09 0.00 41.60 4.45
3506 6899 4.630894 AGACGAAGATGTAGCTTCTCAG 57.369 45.455 8.09 0.00 41.60 3.35
3552 6945 1.509923 GCCAGCTCAGGTTTCATGC 59.490 57.895 0.00 0.00 0.00 4.06
3625 7018 7.121168 TGGTCATTTTCCTTGCTATTGTTAGAG 59.879 37.037 0.00 0.00 0.00 2.43
3675 7068 2.027003 TTCCGTTGTGAAAACGAGGT 57.973 45.000 9.87 0.00 45.64 3.85
3693 7086 5.049954 GCAGTGCAAACAATGAACATCATTT 60.050 36.000 11.09 0.00 44.03 2.32
3706 7099 2.680805 GCTATCTAGGGCAGTGCAAACA 60.681 50.000 18.61 0.00 0.00 2.83
3707 7100 1.943340 GCTATCTAGGGCAGTGCAAAC 59.057 52.381 18.61 6.52 0.00 2.93
3716 7109 0.972883 CTCCTGTGGCTATCTAGGGC 59.027 60.000 0.00 0.00 0.00 5.19
3732 7125 1.248486 GAACTGAAAAGCCCACCTCC 58.752 55.000 0.00 0.00 0.00 4.30
3838 7231 2.580783 CCTGGGAGGGGTTTATCTTTCA 59.419 50.000 0.00 0.00 0.00 2.69
3846 7239 4.589569 CTCTCCTGGGAGGGGTTT 57.410 61.111 15.66 0.00 42.20 3.27
3898 7291 3.579586 TGGTTAACACCCTCACTTATCGT 59.420 43.478 8.10 0.00 43.49 3.73
3899 7292 3.930848 GTGGTTAACACCCTCACTTATCG 59.069 47.826 8.10 0.00 43.49 2.92
3917 7311 1.056660 CCCAACTAGTGTCCTGTGGT 58.943 55.000 0.00 0.00 0.00 4.16
3951 7345 3.876309 ATTGAGTGGTGTTTGGTAGGT 57.124 42.857 0.00 0.00 0.00 3.08
3962 7356 9.975218 ATTAATTCCTTTACAGTATTGAGTGGT 57.025 29.630 0.00 0.00 0.00 4.16
3975 7369 8.637986 TGTTGGGCATATCATTAATTCCTTTAC 58.362 33.333 0.00 0.00 0.00 2.01
4079 7473 2.440796 TACTGGGTAGGGACGCCG 60.441 66.667 0.00 0.00 37.72 6.46
4115 7509 0.976641 TCACGCTTCTCAGATGGGTT 59.023 50.000 7.47 0.00 32.39 4.11
4125 7519 0.392193 CATGGCCTCTTCACGCTTCT 60.392 55.000 3.32 0.00 0.00 2.85
4130 7524 1.078918 TGAGCATGGCCTCTTCACG 60.079 57.895 3.32 0.00 33.02 4.35
4135 7529 1.302285 CAAGGTGAGCATGGCCTCT 59.698 57.895 3.32 0.00 33.02 3.69
4178 7572 2.621055 CAGAGATCAAGGGGTACTCTCG 59.379 54.545 0.00 0.00 37.89 4.04
4189 7584 5.176592 TCTGTTGAAGCATCAGAGATCAAG 58.823 41.667 0.00 0.00 35.92 3.02
4199 7594 2.751259 TCCTTGCATCTGTTGAAGCATC 59.249 45.455 0.00 0.00 44.72 3.91
4229 7624 2.202388 CAAGCGCATTCAGCACGG 60.202 61.111 11.47 0.00 46.13 4.94
4230 7625 1.225936 CTCAAGCGCATTCAGCACG 60.226 57.895 11.47 0.00 46.13 5.34
4302 7697 3.508840 CGCCTTCACCGAATGGCC 61.509 66.667 0.00 0.00 42.15 5.36
4327 7722 0.538516 ACGAGTGTCAGCCTCTCAGT 60.539 55.000 0.00 0.00 0.00 3.41
4378 7774 9.367444 CGATAGTGTCCTTTGAGTAATAGTTTT 57.633 33.333 0.00 0.00 0.00 2.43
4401 7797 1.524482 GCTCTGGGCTTTCCTCGAT 59.476 57.895 0.00 0.00 38.06 3.59
4419 7815 2.026522 CCTAGAAGGAGAGGCGTCG 58.973 63.158 0.00 0.00 37.67 5.12
4442 7838 0.253160 ATGTCAAGGGAGGCCACCTA 60.253 55.000 19.48 4.24 37.35 3.08
4499 7895 8.881262 GGAGAAGAAGGATTTGGGTATCTTATA 58.119 37.037 0.00 0.00 0.00 0.98
4598 7994 3.347958 TCTTGAACGGAACAATGTTGC 57.652 42.857 2.20 5.25 0.00 4.17
4678 8074 0.109532 GAAGATAGGGCAGGCCTTCC 59.890 60.000 22.97 13.89 36.10 3.46
4686 8082 1.618837 GGTAGCGATGAAGATAGGGCA 59.381 52.381 0.00 0.00 0.00 5.36
4702 8098 4.180057 GAGCAGATGACTTTGACAGGTAG 58.820 47.826 0.00 0.00 0.00 3.18
4712 8108 1.160137 GCGTTTGGAGCAGATGACTT 58.840 50.000 0.00 0.00 34.19 3.01
4730 8126 0.034670 AGAAGAATGACCAGCTGGGC 60.035 55.000 35.42 34.37 45.93 5.36
4734 8130 1.280421 GTGGGAGAAGAATGACCAGCT 59.720 52.381 0.00 0.00 0.00 4.24
4779 8175 1.151668 CCAGTGCTTCTGTTTCTCCG 58.848 55.000 8.23 0.00 42.19 4.63
4795 8191 0.259938 AAGCCCTGCCCTTATTCCAG 59.740 55.000 0.00 0.00 0.00 3.86
4796 8192 0.258774 GAAGCCCTGCCCTTATTCCA 59.741 55.000 0.00 0.00 0.00 3.53
4809 8205 1.759459 CGGGTGAGGATAGGAAGCCC 61.759 65.000 0.00 0.00 0.00 5.19
4810 8206 1.749033 CGGGTGAGGATAGGAAGCC 59.251 63.158 0.00 0.00 0.00 4.35
4820 8216 2.123425 TAGCTAGGGCGGGTGAGG 60.123 66.667 0.00 0.00 44.37 3.86
4877 8273 0.317160 ATGTCACGGAGTCGCTTCAA 59.683 50.000 0.00 0.00 41.61 2.69
4887 8283 7.081349 GTCATTAACATTCAAAATGTCACGGA 58.919 34.615 5.83 0.97 33.35 4.69
4950 8346 6.094048 GCTTACATTGCTTAACTTGAGATGGA 59.906 38.462 0.00 0.00 0.00 3.41
4974 8370 1.137479 TGTATACCAACGTGGCTAGGC 59.863 52.381 9.85 9.85 42.67 3.93
4986 8382 3.133362 CCTAACCTTCGCCTTGTATACCA 59.867 47.826 0.00 0.00 0.00 3.25
5011 8407 1.734655 TCTCTTTCCCACTGAGCCTT 58.265 50.000 0.00 0.00 0.00 4.35
5074 8471 5.482526 TGTCTTGTGCTTATAACTCACCCTA 59.517 40.000 9.42 0.00 0.00 3.53
5089 8486 5.241662 AGATCTAAAGGACTTGTCTTGTGC 58.758 41.667 0.00 0.00 0.00 4.57
5097 8494 5.220970 GGTCGAGAGAGATCTAAAGGACTTG 60.221 48.000 0.00 0.00 43.49 3.16
5142 8552 1.132500 ATACCCTACTCCTGCCTTGC 58.868 55.000 0.00 0.00 0.00 4.01
5187 8597 3.744940 AGAATGAGAGGATTTGCCCAA 57.255 42.857 0.00 0.00 37.37 4.12
5206 8616 8.094548 TGGTATAATCGGAATGGAAGATGTTAG 58.905 37.037 0.00 0.00 0.00 2.34
5223 8633 1.137513 GGAGCGCGTGTGGTATAATC 58.862 55.000 8.43 0.00 0.00 1.75
5274 8684 1.064357 GTCAAAGTTTCGTTCCGGCAA 59.936 47.619 0.00 0.00 0.00 4.52
5283 8693 8.614994 ATTTTAGAACAAGTGTCAAAGTTTCG 57.385 30.769 0.00 0.00 0.00 3.46
5554 11905 3.480470 GCAAAGAGCCATTATAGCCTCA 58.520 45.455 0.00 0.00 37.23 3.86
5721 12074 8.747538 AGGAAGTGTAATAAGTTGTTTGAGTT 57.252 30.769 0.00 0.00 0.00 3.01
5808 12213 9.277565 GTATCACATTGTTATGTCATGTTGAAC 57.722 33.333 0.00 0.00 43.07 3.18
5836 12241 8.395633 TCAAAAGCTAGGAATAGAATAAAACGC 58.604 33.333 0.00 0.00 0.00 4.84
5870 12275 3.891049 AGTTAGGGCATCTTTGATCCAC 58.109 45.455 0.00 0.00 0.00 4.02
5873 12278 6.823689 TGACTTTAGTTAGGGCATCTTTGATC 59.176 38.462 0.00 0.00 0.00 2.92
5906 12311 7.319646 ACTCAAGAGACAATATGAGAGTTGAC 58.680 38.462 8.48 0.00 41.38 3.18
5970 12393 4.486503 CAGCTGCTCCAGGCTCCC 62.487 72.222 0.00 0.00 42.39 4.30
5985 12408 1.064654 GGCGCCTAAATTCTGCTTCAG 59.935 52.381 22.15 0.00 0.00 3.02
6012 12435 7.043192 CGAAAAACTTTCTTAACACCGACTCTA 60.043 37.037 0.00 0.00 0.00 2.43
6018 12441 6.858104 AAACGAAAAACTTTCTTAACACCG 57.142 33.333 0.00 0.00 0.00 4.94
6039 12462 1.065709 GTGGGCCAGGAGTTCGATAAA 60.066 52.381 6.40 0.00 0.00 1.40
6077 12500 0.621280 TCATCTGGTGAGCCCCATCA 60.621 55.000 0.00 0.00 34.15 3.07
6134 12557 3.225104 ACTGGGTCGTGTAGTACTTGAA 58.775 45.455 0.00 0.00 0.00 2.69
6738 13212 6.146021 GTGGCATTTTCACCAACAAAATAGAG 59.854 38.462 0.00 0.00 37.79 2.43
6780 13254 6.658831 CGGATGACATACACCATTGATTTAC 58.341 40.000 0.00 0.00 0.00 2.01
6804 13278 7.932120 AATTATGTCTCTACGAGTGTATTGC 57.068 36.000 0.00 0.00 0.00 3.56
6921 13398 4.403432 CCCATGTCCTGCATAGAAACAAAT 59.597 41.667 0.00 0.00 35.74 2.32
6931 13408 3.051581 AGTTAGATCCCATGTCCTGCAT 58.948 45.455 0.00 0.00 38.60 3.96
7030 13507 3.513515 TGTTTATGAAATCTTGTGCCCCC 59.486 43.478 0.00 0.00 0.00 5.40
7033 13510 6.454795 TCCTTTGTTTATGAAATCTTGTGCC 58.545 36.000 0.00 0.00 0.00 5.01
7126 13603 7.306574 GCACTAATTTCCTTTGGTTTTTCTTCG 60.307 37.037 0.00 0.00 0.00 3.79
7338 13816 4.929808 GTGTAGTGGGACTAAACATCACAG 59.070 45.833 0.00 0.00 38.50 3.66
7570 14051 6.016610 GGTTGCAGTTTGTCTCTTTACCAATA 60.017 38.462 0.00 0.00 0.00 1.90
7577 14058 1.676006 CGGGTTGCAGTTTGTCTCTTT 59.324 47.619 0.00 0.00 0.00 2.52
7590 14071 4.928601 AGTTTTCTTAACTTTCGGGTTGC 58.071 39.130 0.00 0.00 0.00 4.17
7658 14139 5.861787 GTCAAGGCAAATACAAATGTGGTAC 59.138 40.000 0.00 0.00 0.00 3.34
7773 14256 2.128035 GTCGCATTTACGAGATGAGGG 58.872 52.381 0.00 0.00 43.89 4.30
7782 14265 4.731000 TGTTGTTTTTCTGTCGCATTTACG 59.269 37.500 0.00 0.00 0.00 3.18
7833 14316 4.336433 ACATGCAATTCCCTAGAAACATCG 59.664 41.667 0.00 0.00 35.09 3.84
7843 14326 9.592196 AATATAATCACTTACATGCAATTCCCT 57.408 29.630 0.00 0.00 0.00 4.20
7877 14360 3.945346 ACATACAGGGCAATTACGAACA 58.055 40.909 0.00 0.00 0.00 3.18
7881 14364 3.874543 TGCTAACATACAGGGCAATTACG 59.125 43.478 0.00 0.00 0.00 3.18
7897 14380 5.031578 TCGTTGTTGTTTGTCATTGCTAAC 58.968 37.500 0.00 0.00 0.00 2.34
7946 14429 4.974721 CGTTGGGTTGCCCTGGCT 62.975 66.667 9.97 0.00 45.70 4.75
8018 14501 1.421646 CAGGTGAGGGTTCTTGGTTCT 59.578 52.381 0.00 0.00 0.00 3.01
8024 14507 3.288092 GTGTTTTCAGGTGAGGGTTCTT 58.712 45.455 0.00 0.00 0.00 2.52
8038 14521 4.791974 CTTCCTTCTGCTCATGTGTTTTC 58.208 43.478 0.00 0.00 0.00 2.29
8042 14525 1.072806 TGCTTCCTTCTGCTCATGTGT 59.927 47.619 0.00 0.00 0.00 3.72
8074 14557 3.835395 CTCCCCCAGGACTAATCATCTAC 59.165 52.174 0.00 0.00 37.19 2.59
8113 14596 9.649557 TCCTCTTTGGGGAAATAATAACGCAGT 62.650 40.741 0.00 0.00 38.68 4.40
8114 14597 5.221048 CCTCTTTGGGGAAATAATAACGCAG 60.221 44.000 0.00 0.00 0.00 5.18
8115 14598 4.642885 CCTCTTTGGGGAAATAATAACGCA 59.357 41.667 0.00 0.00 0.00 5.24
8116 14599 4.885325 TCCTCTTTGGGGAAATAATAACGC 59.115 41.667 0.00 0.00 36.20 4.84
8117 14600 6.039382 CCTTCCTCTTTGGGGAAATAATAACG 59.961 42.308 0.32 0.00 41.58 3.18
8118 14601 6.323996 CCCTTCCTCTTTGGGGAAATAATAAC 59.676 42.308 0.32 0.00 41.58 1.89
8119 14602 6.220819 TCCCTTCCTCTTTGGGGAAATAATAA 59.779 38.462 0.32 0.00 44.10 1.40
8120 14603 5.739105 TCCCTTCCTCTTTGGGGAAATAATA 59.261 40.000 0.32 0.00 44.10 0.98
8121 14604 4.548250 TCCCTTCCTCTTTGGGGAAATAAT 59.452 41.667 0.32 0.00 44.10 1.28
8122 14605 3.926671 TCCCTTCCTCTTTGGGGAAATAA 59.073 43.478 0.32 0.00 44.10 1.40
8123 14606 3.547903 TCCCTTCCTCTTTGGGGAAATA 58.452 45.455 0.32 0.00 44.10 1.40
8124 14607 2.368170 TCCCTTCCTCTTTGGGGAAAT 58.632 47.619 0.32 0.00 44.10 2.17
8125 14608 1.841334 TCCCTTCCTCTTTGGGGAAA 58.159 50.000 0.32 0.00 44.10 3.13
8126 14609 3.608912 TCCCTTCCTCTTTGGGGAA 57.391 52.632 0.00 0.00 44.10 3.97
8128 14611 1.298953 TCATCCCTTCCTCTTTGGGG 58.701 55.000 0.00 0.00 41.22 4.96
8129 14612 2.941480 CATCATCCCTTCCTCTTTGGG 58.059 52.381 0.00 0.00 42.20 4.12
8130 14613 2.305009 GCATCATCCCTTCCTCTTTGG 58.695 52.381 0.00 0.00 37.10 3.28
8131 14614 2.950309 CTGCATCATCCCTTCCTCTTTG 59.050 50.000 0.00 0.00 0.00 2.77
8132 14615 2.579860 ACTGCATCATCCCTTCCTCTTT 59.420 45.455 0.00 0.00 0.00 2.52
8133 14616 2.203584 ACTGCATCATCCCTTCCTCTT 58.796 47.619 0.00 0.00 0.00 2.85
8134 14617 1.890552 ACTGCATCATCCCTTCCTCT 58.109 50.000 0.00 0.00 0.00 3.69
8135 14618 4.622695 GCTATACTGCATCATCCCTTCCTC 60.623 50.000 0.00 0.00 0.00 3.71
8136 14619 3.262915 GCTATACTGCATCATCCCTTCCT 59.737 47.826 0.00 0.00 0.00 3.36
8137 14620 3.262915 AGCTATACTGCATCATCCCTTCC 59.737 47.826 0.00 0.00 34.99 3.46
8138 14621 4.550076 AGCTATACTGCATCATCCCTTC 57.450 45.455 0.00 0.00 34.99 3.46
8139 14622 4.081972 CGTAGCTATACTGCATCATCCCTT 60.082 45.833 0.00 0.00 34.99 3.95
8140 14623 3.445450 CGTAGCTATACTGCATCATCCCT 59.555 47.826 0.00 0.00 34.99 4.20
8141 14624 3.429547 CCGTAGCTATACTGCATCATCCC 60.430 52.174 0.00 0.00 34.99 3.85
8142 14625 3.193691 ACCGTAGCTATACTGCATCATCC 59.806 47.826 0.00 0.00 34.99 3.51
8143 14626 4.442375 ACCGTAGCTATACTGCATCATC 57.558 45.455 0.00 0.00 34.99 2.92
8144 14627 4.399618 CCTACCGTAGCTATACTGCATCAT 59.600 45.833 0.00 0.00 34.99 2.45
8145 14628 3.756963 CCTACCGTAGCTATACTGCATCA 59.243 47.826 0.00 0.00 34.99 3.07
8146 14629 3.757493 ACCTACCGTAGCTATACTGCATC 59.243 47.826 0.00 0.00 34.99 3.91
8147 14630 3.764218 ACCTACCGTAGCTATACTGCAT 58.236 45.455 0.00 0.00 34.99 3.96
8148 14631 3.219176 ACCTACCGTAGCTATACTGCA 57.781 47.619 0.00 0.00 34.99 4.41
8149 14632 5.893897 AATACCTACCGTAGCTATACTGC 57.106 43.478 0.00 0.00 0.00 4.40
8150 14633 6.127786 GGGAAATACCTACCGTAGCTATACTG 60.128 46.154 0.00 0.00 38.98 2.74
8151 14634 5.948758 GGGAAATACCTACCGTAGCTATACT 59.051 44.000 0.00 0.00 38.98 2.12
8152 14635 5.948758 AGGGAAATACCTACCGTAGCTATAC 59.051 44.000 0.00 0.00 39.65 1.47
8153 14636 6.144845 AGGGAAATACCTACCGTAGCTATA 57.855 41.667 0.00 0.00 39.65 1.31
8154 14637 5.008165 AGGGAAATACCTACCGTAGCTAT 57.992 43.478 0.00 0.00 39.65 2.97
8155 14638 4.141181 TGAGGGAAATACCTACCGTAGCTA 60.141 45.833 0.00 0.00 42.10 3.32
8156 14639 3.229293 GAGGGAAATACCTACCGTAGCT 58.771 50.000 0.00 0.00 42.10 3.32
8157 14640 2.961062 TGAGGGAAATACCTACCGTAGC 59.039 50.000 0.00 0.00 42.10 3.58
8158 14641 4.213513 ACTGAGGGAAATACCTACCGTAG 58.786 47.826 0.00 0.00 42.10 3.51
8159 14642 4.255510 ACTGAGGGAAATACCTACCGTA 57.744 45.455 0.00 0.00 42.10 4.02
8160 14643 3.111741 ACTGAGGGAAATACCTACCGT 57.888 47.619 0.00 0.00 42.10 4.83
8161 14644 3.197116 ACAACTGAGGGAAATACCTACCG 59.803 47.826 0.00 0.00 42.10 4.02
8162 14645 4.224370 TCACAACTGAGGGAAATACCTACC 59.776 45.833 0.00 0.00 42.10 3.18
8163 14646 5.416271 TCACAACTGAGGGAAATACCTAC 57.584 43.478 0.00 0.00 42.10 3.18
8165 14648 4.993705 TTCACAACTGAGGGAAATACCT 57.006 40.909 0.00 0.00 45.57 3.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.