Multiple sequence alignment - TraesCS7D01G227800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G227800 chr7D 100.000 5274 0 0 1 5274 188159187 188164460 0.000000e+00 9740.0
1 TraesCS7D01G227800 chr7D 94.455 541 30 0 2 542 66104347 66103807 0.000000e+00 833.0
2 TraesCS7D01G227800 chr7D 97.576 165 4 0 1766 1930 615653201 615653365 3.110000e-72 283.0
3 TraesCS7D01G227800 chr7D 90.179 112 6 5 5143 5254 106367230 106367336 1.980000e-29 141.0
4 TraesCS7D01G227800 chr7D 88.636 88 7 3 1989 2075 70228801 70228886 2.600000e-18 104.0
5 TraesCS7D01G227800 chr7D 88.636 88 7 3 1990 2076 187655319 187655404 2.600000e-18 104.0
6 TraesCS7D01G227800 chr7D 98.113 53 1 0 1 53 555664540 555664488 5.620000e-15 93.5
7 TraesCS7D01G227800 chr7D 98.113 53 1 0 1 53 580228835 580228887 5.620000e-15 93.5
8 TraesCS7D01G227800 chr7B 93.967 2188 90 26 2224 4376 332012231 332014411 0.000000e+00 3271.0
9 TraesCS7D01G227800 chr7B 97.122 973 27 1 802 1773 332010856 332011828 0.000000e+00 1640.0
10 TraesCS7D01G227800 chr7B 94.369 515 28 1 49 563 74832906 74833419 0.000000e+00 789.0
11 TraesCS7D01G227800 chr7B 83.725 639 51 29 4573 5173 332114763 332115386 5.970000e-154 555.0
12 TraesCS7D01G227800 chr7B 84.394 487 60 4 4702 5173 676159805 676160290 1.030000e-126 464.0
13 TraesCS7D01G227800 chr7B 94.054 185 5 1 4411 4589 332014395 332014579 5.200000e-70 276.0
14 TraesCS7D01G227800 chr7B 97.849 93 1 1 5171 5263 726226978 726227069 5.470000e-35 159.0
15 TraesCS7D01G227800 chr7B 97.753 89 2 0 731 819 332009342 332009430 2.540000e-33 154.0
16 TraesCS7D01G227800 chr7B 96.703 91 3 0 5170 5260 414314539 414314449 9.150000e-33 152.0
17 TraesCS7D01G227800 chr7B 89.524 105 11 0 627 731 74833571 74833675 3.310000e-27 134.0
18 TraesCS7D01G227800 chr7B 97.222 36 1 0 2086 2121 332011892 332011927 1.590000e-05 62.1
19 TraesCS7D01G227800 chr7A 93.858 1563 73 11 2836 4376 195839880 195838319 0.000000e+00 2333.0
20 TraesCS7D01G227800 chr7A 96.660 1048 27 6 731 1773 195841951 195840907 0.000000e+00 1735.0
21 TraesCS7D01G227800 chr7A 91.099 719 39 7 2134 2847 195840826 195840128 0.000000e+00 950.0
22 TraesCS7D01G227800 chr7A 86.345 249 17 13 4409 4650 195838339 195838101 6.780000e-64 255.0
23 TraesCS7D01G227800 chr7A 96.610 59 2 0 1928 1986 195840916 195840858 1.210000e-16 99.0
24 TraesCS7D01G227800 chr5D 95.060 587 26 1 1 587 509282725 509282142 0.000000e+00 920.0
25 TraesCS7D01G227800 chr5D 94.538 476 25 1 49 524 300761402 300761876 0.000000e+00 734.0
26 TraesCS7D01G227800 chr5D 97.576 165 4 0 1766 1930 396075176 396075012 3.110000e-72 283.0
27 TraesCS7D01G227800 chr5D 98.113 53 1 0 1 53 470046295 470046347 5.620000e-15 93.5
28 TraesCS7D01G227800 chr4D 94.105 475 23 1 113 587 491458390 491457921 0.000000e+00 717.0
29 TraesCS7D01G227800 chr6B 93.277 476 32 0 49 524 485866119 485866594 0.000000e+00 702.0
30 TraesCS7D01G227800 chr6B 89.306 533 51 6 48 577 695008660 695009189 0.000000e+00 664.0
31 TraesCS7D01G227800 chr6B 87.640 356 27 6 4702 5044 93911352 93911001 1.060000e-106 398.0
32 TraesCS7D01G227800 chr6B 86.598 97 10 3 1985 2080 12535595 12535689 2.600000e-18 104.0
33 TraesCS7D01G227800 chr1B 91.279 516 40 5 49 562 604306986 604307498 0.000000e+00 699.0
34 TraesCS7D01G227800 chr1B 89.655 87 6 2 1990 2075 613025606 613025690 2.010000e-19 108.0
35 TraesCS7D01G227800 chr1B 98.113 53 1 0 1 53 395063309 395063257 5.620000e-15 93.5
36 TraesCS7D01G227800 chr1B 98.113 53 1 0 1 53 492786822 492786770 5.620000e-15 93.5
37 TraesCS7D01G227800 chr5B 90.226 532 45 3 49 579 206099479 206100004 0.000000e+00 688.0
38 TraesCS7D01G227800 chr5B 86.570 484 50 4 4703 5173 352396874 352397355 2.180000e-143 520.0
39 TraesCS7D01G227800 chrUn 88.069 461 39 5 4702 5148 18920415 18920873 2.800000e-147 532.0
40 TraesCS7D01G227800 chrUn 97.576 165 4 0 1766 1930 112721135 112721299 3.110000e-72 283.0
41 TraesCS7D01G227800 chrUn 98.113 53 1 0 1 53 76772581 76772633 5.620000e-15 93.5
42 TraesCS7D01G227800 chr3A 89.182 379 33 6 4795 5173 8740671 8740301 2.880000e-127 466.0
43 TraesCS7D01G227800 chr3A 84.631 488 44 11 4703 5173 8731713 8731240 1.730000e-124 457.0
44 TraesCS7D01G227800 chr3A 97.778 45 0 1 4377 4420 378814890 378814846 5.660000e-10 76.8
45 TraesCS7D01G227800 chr5A 86.452 310 28 9 4703 4999 69552315 69552623 1.420000e-85 327.0
46 TraesCS7D01G227800 chr5A 93.137 102 5 2 5156 5256 612226737 612226837 1.180000e-31 148.0
47 TraesCS7D01G227800 chr5A 88.542 96 8 2 1989 2083 164153893 164153800 4.320000e-21 113.0
48 TraesCS7D01G227800 chr5A 87.912 91 8 3 1987 2076 451615047 451615135 2.600000e-18 104.0
49 TraesCS7D01G227800 chr5A 87.640 89 8 3 1990 2077 651620854 651620940 3.360000e-17 100.0
50 TraesCS7D01G227800 chr5A 86.364 88 9 3 1989 2075 697740577 697740492 5.620000e-15 93.5
51 TraesCS7D01G227800 chr2D 98.225 169 3 0 1763 1931 559208681 559208849 3.990000e-76 296.0
52 TraesCS7D01G227800 chr3D 98.214 168 3 0 1764 1931 8971806 8971973 1.440000e-75 294.0
53 TraesCS7D01G227800 chr3D 97.619 168 4 0 1763 1930 386293345 386293512 6.680000e-74 289.0
54 TraesCS7D01G227800 chr3D 97.576 165 4 0 1766 1930 555217499 555217663 3.110000e-72 283.0
55 TraesCS7D01G227800 chr3D 97.778 45 0 1 4377 4420 288551320 288551276 5.660000e-10 76.8
56 TraesCS7D01G227800 chr6D 95.977 174 7 0 1759 1932 48662030 48662203 3.110000e-72 283.0
57 TraesCS7D01G227800 chr6D 93.878 98 6 0 5171 5268 460470430 460470333 1.180000e-31 148.0
58 TraesCS7D01G227800 chr6D 98.113 53 1 0 1 53 462396171 462396223 5.620000e-15 93.5
59 TraesCS7D01G227800 chr4A 97.024 168 5 0 1763 1930 740939729 740939896 3.110000e-72 283.0
60 TraesCS7D01G227800 chr6A 98.876 89 1 0 5168 5256 478526385 478526473 5.470000e-35 159.0
61 TraesCS7D01G227800 chr1A 94.286 105 5 1 5162 5266 592316867 592316764 5.470000e-35 159.0
62 TraesCS7D01G227800 chr1A 93.939 99 4 2 5159 5256 373317571 373317668 1.180000e-31 148.0
63 TraesCS7D01G227800 chr2B 95.050 101 4 1 5164 5264 197683235 197683334 1.970000e-34 158.0
64 TraesCS7D01G227800 chr3B 89.011 91 7 3 1988 2077 189918639 189918551 5.580000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G227800 chr7D 188159187 188164460 5273 False 9740.00 9740 100.0000 1 5274 1 chr7D.!!$F4 5273
1 TraesCS7D01G227800 chr7D 66103807 66104347 540 True 833.00 833 94.4550 2 542 1 chr7D.!!$R1 540
2 TraesCS7D01G227800 chr7B 332009342 332014579 5237 False 1080.62 3271 96.0236 731 4589 5 chr7B.!!$F5 3858
3 TraesCS7D01G227800 chr7B 332114763 332115386 623 False 555.00 555 83.7250 4573 5173 1 chr7B.!!$F1 600
4 TraesCS7D01G227800 chr7B 74832906 74833675 769 False 461.50 789 91.9465 49 731 2 chr7B.!!$F4 682
5 TraesCS7D01G227800 chr7A 195838101 195841951 3850 True 1074.40 2333 92.9144 731 4650 5 chr7A.!!$R1 3919
6 TraesCS7D01G227800 chr5D 509282142 509282725 583 True 920.00 920 95.0600 1 587 1 chr5D.!!$R2 586
7 TraesCS7D01G227800 chr6B 695008660 695009189 529 False 664.00 664 89.3060 48 577 1 chr6B.!!$F3 529
8 TraesCS7D01G227800 chr1B 604306986 604307498 512 False 699.00 699 91.2790 49 562 1 chr1B.!!$F1 513
9 TraesCS7D01G227800 chr5B 206099479 206100004 525 False 688.00 688 90.2260 49 579 1 chr5B.!!$F1 530

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
677 790 0.257328 TCAGACAACCAAACAGCCCA 59.743 50.0 0.00 0.0 0.0 5.36 F
1775 3335 0.097674 CGTACGTTGTACTCCCTCCG 59.902 60.0 7.22 0.0 0.0 4.63 F
1779 3339 0.108945 CGTTGTACTCCCTCCGTTCC 60.109 60.0 0.00 0.0 0.0 3.62 F
3045 5093 0.035152 TGCATCTCGTTGGATTGGCT 60.035 50.0 0.00 0.0 0.0 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2522 4302 0.523546 CTCGCGCTCGTGTGTCTTAT 60.524 55.0 5.56 0.0 36.96 1.73 R
3045 5093 0.526739 CTGACGTGTGGTGTGACGAA 60.527 55.0 0.00 0.0 38.94 3.85 R
3619 5703 0.816825 CGATGATGGCCTGGAACCTG 60.817 60.0 3.32 0.0 0.00 4.00 R
4707 6813 0.460635 GCAACGTTGCGGGGTATCTA 60.461 55.0 34.84 0.0 45.11 1.98 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 2.096248 GTCGACAGAGGAGGAGAATGT 58.904 52.381 11.55 0.00 0.00 2.71
73 74 4.681978 GGACCGGAGCACAGCGTT 62.682 66.667 9.46 0.00 0.00 4.84
146 147 4.752879 GCTTGCCGTCACCGCCTA 62.753 66.667 0.00 0.00 0.00 3.93
216 217 2.051614 CAGCAGCACAAGCACGTG 60.052 61.111 12.28 12.28 45.49 4.49
296 297 7.428761 CGAAACCAAAAACTTACAACACGAATA 59.571 33.333 0.00 0.00 0.00 1.75
487 488 2.662791 CGAGGTGCATCTTTTTCGTGTG 60.663 50.000 0.00 0.00 0.00 3.82
564 566 9.095700 AGAACAGAATTAGAGAGAAGGTTACTT 57.904 33.333 0.00 0.00 40.34 2.24
565 567 9.145865 GAACAGAATTAGAGAGAAGGTTACTTG 57.854 37.037 0.00 0.00 36.97 3.16
566 568 8.423906 ACAGAATTAGAGAGAAGGTTACTTGA 57.576 34.615 0.00 0.00 36.97 3.02
567 569 9.041354 ACAGAATTAGAGAGAAGGTTACTTGAT 57.959 33.333 0.00 0.00 36.97 2.57
592 705 2.468831 GAGAAGATAAGCACAGCGAGG 58.531 52.381 0.00 0.00 0.00 4.63
617 730 2.875080 CGGAGGTGCTTTAAGTTTCG 57.125 50.000 0.00 0.00 0.00 3.46
624 737 5.484715 AGGTGCTTTAAGTTTCGTGCTATA 58.515 37.500 0.00 0.00 0.00 1.31
627 740 6.347888 GGTGCTTTAAGTTTCGTGCTATACAA 60.348 38.462 0.00 0.00 0.00 2.41
629 742 6.425721 TGCTTTAAGTTTCGTGCTATACAAGT 59.574 34.615 0.00 0.00 0.00 3.16
630 743 7.041644 TGCTTTAAGTTTCGTGCTATACAAGTT 60.042 33.333 0.00 0.00 0.00 2.66
631 744 7.801783 GCTTTAAGTTTCGTGCTATACAAGTTT 59.198 33.333 0.00 0.00 0.00 2.66
632 745 9.659830 CTTTAAGTTTCGTGCTATACAAGTTTT 57.340 29.630 0.00 0.00 0.00 2.43
633 746 8.996988 TTAAGTTTCGTGCTATACAAGTTTTG 57.003 30.769 0.00 0.00 0.00 2.44
635 748 6.427150 AGTTTCGTGCTATACAAGTTTTGTG 58.573 36.000 4.78 0.00 45.03 3.33
636 749 4.398549 TCGTGCTATACAAGTTTTGTGC 57.601 40.909 4.78 1.09 45.03 4.57
637 750 4.062293 TCGTGCTATACAAGTTTTGTGCT 58.938 39.130 4.78 0.00 45.03 4.40
638 751 5.231702 TCGTGCTATACAAGTTTTGTGCTA 58.768 37.500 4.78 0.00 45.03 3.49
639 752 5.872617 TCGTGCTATACAAGTTTTGTGCTAT 59.127 36.000 4.78 0.00 45.03 2.97
640 753 7.036829 TCGTGCTATACAAGTTTTGTGCTATA 58.963 34.615 4.78 0.00 45.03 1.31
641 754 7.009815 TCGTGCTATACAAGTTTTGTGCTATAC 59.990 37.037 4.78 0.00 45.03 1.47
642 755 7.201487 CGTGCTATACAAGTTTTGTGCTATACA 60.201 37.037 4.78 0.00 45.03 2.29
643 756 8.116753 GTGCTATACAAGTTTTGTGCTATACAG 58.883 37.037 4.78 0.00 45.03 2.74
644 757 7.279981 TGCTATACAAGTTTTGTGCTATACAGG 59.720 37.037 4.78 0.00 45.03 4.00
645 758 7.280205 GCTATACAAGTTTTGTGCTATACAGGT 59.720 37.037 4.78 0.00 45.03 4.00
677 790 0.257328 TCAGACAACCAAACAGCCCA 59.743 50.000 0.00 0.00 0.00 5.36
685 798 0.318120 CCAAACAGCCCATTCGCTTT 59.682 50.000 0.00 0.00 36.82 3.51
686 799 1.669795 CCAAACAGCCCATTCGCTTTC 60.670 52.381 0.00 0.00 36.82 2.62
714 827 1.843368 CCTGATTGGGCTTCACACAT 58.157 50.000 0.00 0.00 0.00 3.21
719 832 1.340088 TTGGGCTTCACACATGCAAT 58.660 45.000 0.00 0.00 0.00 3.56
734 847 1.268352 TGCAATCAAACACGCCCTTAC 59.732 47.619 0.00 0.00 0.00 2.34
891 2448 8.650714 CCTGATAAAACAAAGCAAAATCTAAGC 58.349 33.333 0.00 0.00 0.00 3.09
1333 2890 4.994471 TGCTGGTGTGCAGCTCCG 62.994 66.667 0.00 0.00 45.28 4.63
1440 2997 2.424733 GGGAGACTACCCGCTGTCC 61.425 68.421 0.00 0.00 40.49 4.02
1750 3310 1.269569 TGGTGCACTACGTGTCTCTTG 60.270 52.381 17.98 0.00 35.75 3.02
1767 3327 2.053627 CTTGGACCACGTACGTTGTAC 58.946 52.381 24.06 24.06 0.00 2.90
1768 3328 1.317613 TGGACCACGTACGTTGTACT 58.682 50.000 28.72 8.36 0.00 2.73
1769 3329 1.266718 TGGACCACGTACGTTGTACTC 59.733 52.381 28.72 19.18 0.00 2.59
1770 3330 1.401539 GGACCACGTACGTTGTACTCC 60.402 57.143 23.67 17.31 0.00 3.85
1771 3331 0.598065 ACCACGTACGTTGTACTCCC 59.402 55.000 22.12 0.00 0.00 4.30
1772 3332 0.883833 CCACGTACGTTGTACTCCCT 59.116 55.000 20.23 0.00 0.00 4.20
1773 3333 1.135575 CCACGTACGTTGTACTCCCTC 60.136 57.143 20.23 0.00 0.00 4.30
1774 3334 1.135575 CACGTACGTTGTACTCCCTCC 60.136 57.143 20.23 0.00 0.00 4.30
1775 3335 0.097674 CGTACGTTGTACTCCCTCCG 59.902 60.000 7.22 0.00 0.00 4.63
1776 3336 1.168714 GTACGTTGTACTCCCTCCGT 58.831 55.000 0.00 0.00 0.00 4.69
1777 3337 1.541588 GTACGTTGTACTCCCTCCGTT 59.458 52.381 0.00 0.00 0.00 4.44
1778 3338 0.600057 ACGTTGTACTCCCTCCGTTC 59.400 55.000 0.00 0.00 0.00 3.95
1779 3339 0.108945 CGTTGTACTCCCTCCGTTCC 60.109 60.000 0.00 0.00 0.00 3.62
1780 3340 0.248565 GTTGTACTCCCTCCGTTCCC 59.751 60.000 0.00 0.00 0.00 3.97
1781 3341 0.178926 TTGTACTCCCTCCGTTCCCA 60.179 55.000 0.00 0.00 0.00 4.37
1782 3342 0.178926 TGTACTCCCTCCGTTCCCAA 60.179 55.000 0.00 0.00 0.00 4.12
1783 3343 0.535797 GTACTCCCTCCGTTCCCAAG 59.464 60.000 0.00 0.00 0.00 3.61
1784 3344 0.115745 TACTCCCTCCGTTCCCAAGT 59.884 55.000 0.00 0.00 0.00 3.16
1785 3345 0.115745 ACTCCCTCCGTTCCCAAGTA 59.884 55.000 0.00 0.00 0.00 2.24
1786 3346 1.273666 ACTCCCTCCGTTCCCAAGTAT 60.274 52.381 0.00 0.00 0.00 2.12
1787 3347 2.023695 ACTCCCTCCGTTCCCAAGTATA 60.024 50.000 0.00 0.00 0.00 1.47
1788 3348 3.036091 CTCCCTCCGTTCCCAAGTATAA 58.964 50.000 0.00 0.00 0.00 0.98
1789 3349 3.036091 TCCCTCCGTTCCCAAGTATAAG 58.964 50.000 0.00 0.00 0.00 1.73
1790 3350 2.770232 CCCTCCGTTCCCAAGTATAAGT 59.230 50.000 0.00 0.00 0.00 2.24
1791 3351 3.181468 CCCTCCGTTCCCAAGTATAAGTC 60.181 52.174 0.00 0.00 0.00 3.01
1792 3352 3.705072 CCTCCGTTCCCAAGTATAAGTCT 59.295 47.826 0.00 0.00 0.00 3.24
1793 3353 4.161754 CCTCCGTTCCCAAGTATAAGTCTT 59.838 45.833 0.00 0.00 0.00 3.01
1794 3354 5.338137 CCTCCGTTCCCAAGTATAAGTCTTT 60.338 44.000 0.00 0.00 0.00 2.52
1795 3355 5.727434 TCCGTTCCCAAGTATAAGTCTTTC 58.273 41.667 0.00 0.00 0.00 2.62
1796 3356 5.482878 TCCGTTCCCAAGTATAAGTCTTTCT 59.517 40.000 0.00 0.00 0.00 2.52
1797 3357 6.664816 TCCGTTCCCAAGTATAAGTCTTTCTA 59.335 38.462 0.00 0.00 0.00 2.10
1798 3358 6.979238 CCGTTCCCAAGTATAAGTCTTTCTAG 59.021 42.308 0.00 0.00 0.00 2.43
1799 3359 7.147949 CCGTTCCCAAGTATAAGTCTTTCTAGA 60.148 40.741 0.00 0.00 0.00 2.43
1800 3360 7.916450 CGTTCCCAAGTATAAGTCTTTCTAGAG 59.084 40.741 0.00 0.00 0.00 2.43
1801 3361 8.968969 GTTCCCAAGTATAAGTCTTTCTAGAGA 58.031 37.037 0.00 0.00 0.00 3.10
1802 3362 9.716556 TTCCCAAGTATAAGTCTTTCTAGAGAT 57.283 33.333 0.00 0.00 0.00 2.75
1803 3363 9.716556 TCCCAAGTATAAGTCTTTCTAGAGATT 57.283 33.333 0.00 0.00 0.00 2.40
1811 3371 9.883142 ATAAGTCTTTCTAGAGATTTCAACAGG 57.117 33.333 0.00 0.00 29.76 4.00
1812 3372 7.309770 AGTCTTTCTAGAGATTTCAACAGGT 57.690 36.000 0.00 0.00 0.00 4.00
1813 3373 7.158021 AGTCTTTCTAGAGATTTCAACAGGTG 58.842 38.462 0.00 0.00 0.00 4.00
1814 3374 7.015682 AGTCTTTCTAGAGATTTCAACAGGTGA 59.984 37.037 0.00 0.00 0.00 4.02
1815 3375 7.117092 GTCTTTCTAGAGATTTCAACAGGTGAC 59.883 40.741 0.00 0.00 35.39 3.67
1816 3376 6.672266 TTCTAGAGATTTCAACAGGTGACT 57.328 37.500 0.00 0.00 46.44 3.41
1817 3377 7.776618 TTCTAGAGATTTCAACAGGTGACTA 57.223 36.000 0.00 0.00 40.21 2.59
1818 3378 7.159322 TCTAGAGATTTCAACAGGTGACTAC 57.841 40.000 0.00 0.00 40.21 2.73
1819 3379 5.808366 AGAGATTTCAACAGGTGACTACA 57.192 39.130 0.00 0.00 40.21 2.74
1820 3380 6.365970 AGAGATTTCAACAGGTGACTACAT 57.634 37.500 0.00 0.00 40.21 2.29
1821 3381 7.482169 AGAGATTTCAACAGGTGACTACATA 57.518 36.000 0.00 0.00 40.21 2.29
1822 3382 7.324178 AGAGATTTCAACAGGTGACTACATAC 58.676 38.462 0.00 0.00 40.21 2.39
1823 3383 6.100004 AGATTTCAACAGGTGACTACATACG 58.900 40.000 0.00 0.00 40.21 3.06
1824 3384 5.456548 TTTCAACAGGTGACTACATACGA 57.543 39.130 0.00 0.00 40.21 3.43
1825 3385 5.456548 TTCAACAGGTGACTACATACGAA 57.543 39.130 0.00 0.00 40.21 3.85
1826 3386 5.055642 TCAACAGGTGACTACATACGAAG 57.944 43.478 0.00 0.00 40.21 3.79
1827 3387 3.505464 ACAGGTGACTACATACGAAGC 57.495 47.619 0.00 0.00 40.21 3.86
1828 3388 2.823747 ACAGGTGACTACATACGAAGCA 59.176 45.455 0.00 0.00 40.21 3.91
1829 3389 3.257375 ACAGGTGACTACATACGAAGCAA 59.743 43.478 0.00 0.00 40.21 3.91
1830 3390 4.242475 CAGGTGACTACATACGAAGCAAA 58.758 43.478 0.00 0.00 40.21 3.68
1831 3391 4.688879 CAGGTGACTACATACGAAGCAAAA 59.311 41.667 0.00 0.00 40.21 2.44
1832 3392 5.351465 CAGGTGACTACATACGAAGCAAAAT 59.649 40.000 0.00 0.00 40.21 1.82
1833 3393 5.351465 AGGTGACTACATACGAAGCAAAATG 59.649 40.000 0.00 0.00 40.61 2.32
1834 3394 5.350365 GGTGACTACATACGAAGCAAAATGA 59.650 40.000 0.00 0.00 0.00 2.57
1835 3395 6.455646 GGTGACTACATACGAAGCAAAATGAG 60.456 42.308 0.00 0.00 0.00 2.90
1836 3396 6.090898 GTGACTACATACGAAGCAAAATGAGT 59.909 38.462 0.00 0.00 0.00 3.41
1837 3397 6.090763 TGACTACATACGAAGCAAAATGAGTG 59.909 38.462 0.00 0.00 0.00 3.51
1838 3398 6.163476 ACTACATACGAAGCAAAATGAGTGA 58.837 36.000 0.00 0.00 0.00 3.41
1839 3399 5.940192 ACATACGAAGCAAAATGAGTGAA 57.060 34.783 0.00 0.00 0.00 3.18
1840 3400 6.500684 ACATACGAAGCAAAATGAGTGAAT 57.499 33.333 0.00 0.00 0.00 2.57
1841 3401 6.546395 ACATACGAAGCAAAATGAGTGAATC 58.454 36.000 0.00 0.00 0.00 2.52
1842 3402 6.372659 ACATACGAAGCAAAATGAGTGAATCT 59.627 34.615 0.00 0.00 0.00 2.40
1843 3403 7.549134 ACATACGAAGCAAAATGAGTGAATCTA 59.451 33.333 0.00 0.00 0.00 1.98
1844 3404 6.170675 ACGAAGCAAAATGAGTGAATCTAC 57.829 37.500 0.00 0.00 0.00 2.59
1845 3405 5.700832 ACGAAGCAAAATGAGTGAATCTACA 59.299 36.000 0.00 0.00 0.00 2.74
1846 3406 6.017933 CGAAGCAAAATGAGTGAATCTACAC 58.982 40.000 0.00 0.00 40.60 2.90
1847 3407 6.347644 CGAAGCAAAATGAGTGAATCTACACA 60.348 38.462 0.00 0.00 42.45 3.72
1848 3408 6.246420 AGCAAAATGAGTGAATCTACACAC 57.754 37.500 0.00 0.00 42.45 3.82
1850 3410 7.161404 AGCAAAATGAGTGAATCTACACACTA 58.839 34.615 0.00 0.00 45.54 2.74
1851 3411 7.661437 AGCAAAATGAGTGAATCTACACACTAA 59.339 33.333 0.00 0.00 45.54 2.24
1852 3412 8.289618 GCAAAATGAGTGAATCTACACACTAAA 58.710 33.333 0.00 0.00 45.54 1.85
1866 3426 9.529325 TCTACACACTAAAATATGTCTACATGC 57.471 33.333 5.85 0.00 37.15 4.06
1867 3427 9.313118 CTACACACTAAAATATGTCTACATGCA 57.687 33.333 5.85 0.00 37.15 3.96
1868 3428 8.737168 ACACACTAAAATATGTCTACATGCAT 57.263 30.769 5.85 0.00 37.15 3.96
1869 3429 8.830580 ACACACTAAAATATGTCTACATGCATC 58.169 33.333 0.00 0.00 37.15 3.91
1870 3430 8.285394 CACACTAAAATATGTCTACATGCATCC 58.715 37.037 0.00 0.00 37.15 3.51
1871 3431 7.171508 ACACTAAAATATGTCTACATGCATCCG 59.828 37.037 0.00 0.00 37.15 4.18
1872 3432 7.171508 CACTAAAATATGTCTACATGCATCCGT 59.828 37.037 0.00 0.00 37.15 4.69
1873 3433 8.364894 ACTAAAATATGTCTACATGCATCCGTA 58.635 33.333 0.00 0.00 37.15 4.02
1874 3434 9.371136 CTAAAATATGTCTACATGCATCCGTAT 57.629 33.333 0.00 0.00 37.15 3.06
1876 3436 9.890629 AAAATATGTCTACATGCATCCGTATAT 57.109 29.630 0.00 0.00 37.15 0.86
1877 3437 9.890629 AAATATGTCTACATGCATCCGTATATT 57.109 29.630 0.00 1.00 37.15 1.28
1885 3445 9.981114 CTACATGCATCCGTATATTATATTCCA 57.019 33.333 0.00 0.00 0.00 3.53
1887 3447 9.851686 ACATGCATCCGTATATTATATTCCATT 57.148 29.630 0.00 0.00 0.00 3.16
1923 3483 8.943909 ACAAAGACTTATATTTAGGAACGGAG 57.056 34.615 0.00 0.00 0.00 4.63
1924 3484 7.985752 ACAAAGACTTATATTTAGGAACGGAGG 59.014 37.037 0.00 0.00 0.00 4.30
1925 3485 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
1926 3486 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
1927 3487 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
1976 3536 6.451064 TCTGTACGAGTGACATTCATACAT 57.549 37.500 7.24 0.00 0.00 2.29
1982 3542 4.268644 CGAGTGACATTCATACATGGTGTC 59.731 45.833 15.62 15.62 40.69 3.67
1996 3556 4.774124 CATGGTGTCATCATGTACTTCCT 58.226 43.478 16.68 0.00 37.72 3.36
1998 3558 4.578871 TGGTGTCATCATGTACTTCCTTG 58.421 43.478 0.00 0.00 0.00 3.61
1999 3559 4.041567 TGGTGTCATCATGTACTTCCTTGT 59.958 41.667 0.00 0.00 0.00 3.16
2000 3560 5.247337 TGGTGTCATCATGTACTTCCTTGTA 59.753 40.000 0.00 0.00 0.00 2.41
2001 3561 6.170506 GGTGTCATCATGTACTTCCTTGTAA 58.829 40.000 0.00 0.00 0.00 2.41
2002 3562 6.653320 GGTGTCATCATGTACTTCCTTGTAAA 59.347 38.462 0.00 0.00 0.00 2.01
2003 3563 7.336931 GGTGTCATCATGTACTTCCTTGTAAAT 59.663 37.037 0.00 0.00 0.00 1.40
2004 3564 8.730680 GTGTCATCATGTACTTCCTTGTAAATT 58.269 33.333 0.00 0.00 0.00 1.82
2005 3565 9.952030 TGTCATCATGTACTTCCTTGTAAATTA 57.048 29.630 0.00 0.00 0.00 1.40
2034 3594 9.953697 ATAAGAGCGTTTAGATCAGTACTTTAG 57.046 33.333 0.00 0.00 37.82 1.85
2035 3595 7.393841 AGAGCGTTTAGATCAGTACTTTAGT 57.606 36.000 0.00 0.00 37.82 2.24
2036 3596 7.251994 AGAGCGTTTAGATCAGTACTTTAGTG 58.748 38.462 0.00 0.00 37.82 2.74
2037 3597 6.921914 AGCGTTTAGATCAGTACTTTAGTGT 58.078 36.000 0.00 0.00 0.00 3.55
2038 3598 7.376615 AGCGTTTAGATCAGTACTTTAGTGTT 58.623 34.615 0.00 0.00 0.00 3.32
2039 3599 7.871463 AGCGTTTAGATCAGTACTTTAGTGTTT 59.129 33.333 0.00 0.00 0.00 2.83
2040 3600 8.493547 GCGTTTAGATCAGTACTTTAGTGTTTT 58.506 33.333 0.00 0.00 0.00 2.43
2079 3639 7.944729 ATTAGTTTACGAAGGGAGTAGTACA 57.055 36.000 2.52 0.00 0.00 2.90
2242 4015 1.076024 ACTGCCCACCTCACATGAAAT 59.924 47.619 0.00 0.00 0.00 2.17
2271 4044 7.225538 CGGATTTAAGCTGATACATCTGAAAGT 59.774 37.037 0.00 0.00 33.76 2.66
2276 4049 6.491714 AGCTGATACATCTGAAAGTGGTAT 57.508 37.500 0.00 0.00 37.12 2.73
2277 4050 6.520272 AGCTGATACATCTGAAAGTGGTATC 58.480 40.000 0.00 0.00 44.01 2.24
2283 4058 6.764308 ACATCTGAAAGTGGTATCAAATGG 57.236 37.500 0.00 0.00 30.10 3.16
2311 4086 3.257375 TCAAGAGTTCTAGGCTGCGTTTA 59.743 43.478 0.00 0.00 0.00 2.01
2350 4130 4.085357 AGTTCCATTGCACAGTCAGTTA 57.915 40.909 0.00 0.00 0.00 2.24
2351 4131 4.460263 AGTTCCATTGCACAGTCAGTTAA 58.540 39.130 0.00 0.00 0.00 2.01
2352 4132 5.072741 AGTTCCATTGCACAGTCAGTTAAT 58.927 37.500 0.00 0.00 0.00 1.40
2353 4133 5.536161 AGTTCCATTGCACAGTCAGTTAATT 59.464 36.000 0.00 0.00 0.00 1.40
2354 4134 5.627499 TCCATTGCACAGTCAGTTAATTC 57.373 39.130 0.00 0.00 0.00 2.17
2399 4179 5.237344 GTGTGTCTGTTTCTAAGCTGTGAAT 59.763 40.000 0.00 0.00 0.00 2.57
2407 4187 6.989759 TGTTTCTAAGCTGTGAATGAAGTACA 59.010 34.615 0.00 0.00 0.00 2.90
2473 4253 7.648067 CTGCCATGATTGTTAATCCTGGGATT 61.648 42.308 20.17 17.49 46.83 3.01
2474 4254 8.397018 CTGCCATGATTGTTAATCCTGGGATTA 61.397 40.741 20.17 15.66 46.83 1.75
2477 4257 8.960591 CCATGATTGTTAATCCTGGGATTATAC 58.039 37.037 19.04 18.16 44.90 1.47
2518 4298 5.279306 GCATCCTGGGTTATATTCGAGTACA 60.279 44.000 0.00 0.00 0.00 2.90
2522 4302 6.551975 TCCTGGGTTATATTCGAGTACAATCA 59.448 38.462 0.00 0.00 0.00 2.57
2575 4355 3.908382 GCACTAAACATTTCAGCAAGTCG 59.092 43.478 0.00 0.00 0.00 4.18
2738 4518 3.522553 GAATTCAGTCTGTTCCCCGTAG 58.477 50.000 0.00 0.00 0.00 3.51
2784 4564 7.148000 GCCTAATTATTTTCTCTGAGCCAAAGT 60.148 37.037 0.00 0.00 0.00 2.66
2838 4877 5.588648 TCATAAGGTTGCTGGTTATACTTGC 59.411 40.000 0.00 0.00 0.00 4.01
2880 4927 0.966179 TCGTCAAGTTGCCTAGCTCA 59.034 50.000 0.00 0.00 0.00 4.26
3005 5053 5.058008 CGTTGTAAAATAAGCAAGTTGAGCG 59.942 40.000 7.16 0.00 37.01 5.03
3007 5055 5.448438 TGTAAAATAAGCAAGTTGAGCGTG 58.552 37.500 7.16 0.00 37.01 5.34
3022 5070 4.398319 TGAGCGTGTCTATATCTGGATCA 58.602 43.478 0.00 0.00 0.00 2.92
3029 5077 6.571150 CGTGTCTATATCTGGATCAATCTGCA 60.571 42.308 0.00 0.00 0.00 4.41
3045 5093 0.035152 TGCATCTCGTTGGATTGGCT 60.035 50.000 0.00 0.00 0.00 4.75
3081 5129 2.030805 GTCAGGCCGGCATATCAAATTC 60.031 50.000 30.85 6.30 0.00 2.17
3125 5181 6.299141 TGAATCTGGCTCACTTTAGTTTTCT 58.701 36.000 0.00 0.00 0.00 2.52
3126 5182 6.428159 TGAATCTGGCTCACTTTAGTTTTCTC 59.572 38.462 0.00 0.00 0.00 2.87
3146 5202 4.040445 TCTTTGCAGTTAACAAACCAGC 57.960 40.909 8.61 2.74 33.62 4.85
3157 5213 1.556911 ACAAACCAGCTCGATCAGGAT 59.443 47.619 4.56 0.00 0.00 3.24
3158 5214 2.766263 ACAAACCAGCTCGATCAGGATA 59.234 45.455 4.56 0.00 0.00 2.59
3159 5215 3.197766 ACAAACCAGCTCGATCAGGATAA 59.802 43.478 4.56 0.00 0.00 1.75
3160 5216 3.460857 AACCAGCTCGATCAGGATAAC 57.539 47.619 4.56 0.00 0.00 1.89
3163 5227 2.103094 CCAGCTCGATCAGGATAACCAA 59.897 50.000 0.00 0.00 38.94 3.67
3165 5229 3.034635 AGCTCGATCAGGATAACCAACT 58.965 45.455 0.00 0.00 38.94 3.16
3367 5451 1.874019 CCTCGACCTGAACGCGATG 60.874 63.158 15.93 0.00 33.20 3.84
3369 5453 0.098200 CTCGACCTGAACGCGATGTA 59.902 55.000 15.93 0.00 33.20 2.29
3451 5535 0.741915 CTCAGTACGGCCTCTTCTCC 59.258 60.000 0.00 0.00 0.00 3.71
3463 5547 2.037687 TTCTCCCGCGGGTTCCTA 59.962 61.111 41.57 22.97 36.47 2.94
3595 5679 3.414700 GCGAGCCACCAGAACGTG 61.415 66.667 0.00 0.00 0.00 4.49
3640 5724 1.451927 GTTCCAGGCCATCATCGCA 60.452 57.895 5.01 0.00 0.00 5.10
4234 6318 2.355837 TTGGTGAGCTCGCACGTC 60.356 61.111 27.48 11.51 39.66 4.34
4267 6351 2.098298 CATCCGCACCGCTTTTCG 59.902 61.111 0.00 0.00 38.08 3.46
4386 6470 7.686438 AAAATTACATATGTGCTGTCTGTCA 57.314 32.000 18.81 0.00 0.00 3.58
4387 6471 7.870509 AAATTACATATGTGCTGTCTGTCAT 57.129 32.000 18.81 0.00 0.00 3.06
4388 6472 7.488187 AATTACATATGTGCTGTCTGTCATC 57.512 36.000 18.81 0.00 0.00 2.92
4389 6473 4.750021 ACATATGTGCTGTCTGTCATCT 57.250 40.909 7.78 0.00 0.00 2.90
4390 6474 5.095145 ACATATGTGCTGTCTGTCATCTT 57.905 39.130 7.78 0.00 0.00 2.40
4391 6475 5.114780 ACATATGTGCTGTCTGTCATCTTC 58.885 41.667 7.78 0.00 0.00 2.87
4392 6476 2.070262 TGTGCTGTCTGTCATCTTCG 57.930 50.000 0.00 0.00 0.00 3.79
4393 6477 1.341209 TGTGCTGTCTGTCATCTTCGT 59.659 47.619 0.00 0.00 0.00 3.85
4394 6478 1.989165 GTGCTGTCTGTCATCTTCGTC 59.011 52.381 0.00 0.00 0.00 4.20
4395 6479 1.889170 TGCTGTCTGTCATCTTCGTCT 59.111 47.619 0.00 0.00 0.00 4.18
4396 6480 2.095008 TGCTGTCTGTCATCTTCGTCTC 60.095 50.000 0.00 0.00 0.00 3.36
4397 6481 2.733858 GCTGTCTGTCATCTTCGTCTCC 60.734 54.545 0.00 0.00 0.00 3.71
4398 6482 1.468914 TGTCTGTCATCTTCGTCTCCG 59.531 52.381 0.00 0.00 0.00 4.63
4399 6483 1.095600 TCTGTCATCTTCGTCTCCGG 58.904 55.000 0.00 0.00 33.95 5.14
4400 6484 0.526524 CTGTCATCTTCGTCTCCGGC 60.527 60.000 0.00 0.00 33.95 6.13
4401 6485 1.586564 GTCATCTTCGTCTCCGGCG 60.587 63.158 0.00 0.00 33.95 6.46
4402 6486 2.044555 TCATCTTCGTCTCCGGCGT 61.045 57.895 6.01 0.00 33.95 5.68
4403 6487 1.153823 CATCTTCGTCTCCGGCGTT 60.154 57.895 6.01 0.00 33.95 4.84
4404 6488 0.736325 CATCTTCGTCTCCGGCGTTT 60.736 55.000 6.01 0.00 33.95 3.60
4405 6489 0.458025 ATCTTCGTCTCCGGCGTTTC 60.458 55.000 6.01 0.00 33.95 2.78
4406 6490 1.080705 CTTCGTCTCCGGCGTTTCT 60.081 57.895 6.01 0.00 33.95 2.52
4407 6491 1.071567 CTTCGTCTCCGGCGTTTCTC 61.072 60.000 6.01 0.00 33.95 2.87
4408 6492 1.798234 TTCGTCTCCGGCGTTTCTCA 61.798 55.000 6.01 0.00 33.95 3.27
4409 6493 1.372499 CGTCTCCGGCGTTTCTCAA 60.372 57.895 6.01 0.00 0.00 3.02
4501 6590 7.173390 ACATAGCTCAAACTTTGTAAAGGTCTC 59.827 37.037 9.00 0.00 33.74 3.36
4641 6737 6.201591 TCAAGCCCATCCCACTTAAAAATAT 58.798 36.000 0.00 0.00 0.00 1.28
4642 6738 7.358263 TCAAGCCCATCCCACTTAAAAATATA 58.642 34.615 0.00 0.00 0.00 0.86
4643 6739 8.010105 TCAAGCCCATCCCACTTAAAAATATAT 58.990 33.333 0.00 0.00 0.00 0.86
4644 6740 9.308000 CAAGCCCATCCCACTTAAAAATATATA 57.692 33.333 0.00 0.00 0.00 0.86
4646 6742 9.479549 AGCCCATCCCACTTAAAAATATATATG 57.520 33.333 0.00 0.00 0.00 1.78
4647 6743 9.474313 GCCCATCCCACTTAAAAATATATATGA 57.526 33.333 0.00 0.00 0.00 2.15
4682 6788 2.819477 TTGGTTGCCCAAGGACTTG 58.181 52.632 5.09 5.09 45.93 3.16
4696 6802 2.157989 AGGACTTGGGGGTCTAAGACTT 60.158 50.000 0.00 0.00 35.39 3.01
4697 6803 2.643304 GGACTTGGGGGTCTAAGACTTT 59.357 50.000 0.00 0.00 35.39 2.66
4701 6807 3.572661 TGGGGGTCTAAGACTTTAGGT 57.427 47.619 0.00 0.00 37.47 3.08
4702 6808 4.697802 TGGGGGTCTAAGACTTTAGGTA 57.302 45.455 0.00 0.00 37.47 3.08
4703 6809 4.356436 TGGGGGTCTAAGACTTTAGGTAC 58.644 47.826 0.00 0.00 37.47 3.34
4704 6810 4.046360 TGGGGGTCTAAGACTTTAGGTACT 59.954 45.833 0.00 0.00 37.47 2.73
4706 6812 5.832595 GGGGGTCTAAGACTTTAGGTACTAG 59.167 48.000 0.00 0.00 35.95 2.57
4707 6813 6.430864 GGGGTCTAAGACTTTAGGTACTAGT 58.569 44.000 0.00 0.00 35.95 2.57
4708 6814 7.366913 GGGGGTCTAAGACTTTAGGTACTAGTA 60.367 44.444 0.00 0.00 35.95 1.82
4710 6816 8.490311 GGGTCTAAGACTTTAGGTACTAGTAGA 58.510 40.741 1.87 0.00 35.95 2.59
4716 6822 7.754624 AGACTTTAGGTACTAGTAGATACCCC 58.245 42.308 18.04 0.00 44.25 4.95
4717 6823 6.538263 ACTTTAGGTACTAGTAGATACCCCG 58.462 44.000 18.04 10.81 44.25 5.73
4718 6824 3.431673 AGGTACTAGTAGATACCCCGC 57.568 52.381 18.04 0.00 41.67 6.13
4719 6825 2.713167 AGGTACTAGTAGATACCCCGCA 59.287 50.000 18.04 0.00 41.67 5.69
4721 6827 3.254411 GGTACTAGTAGATACCCCGCAAC 59.746 52.174 1.87 0.00 35.71 4.17
4723 6829 1.952296 CTAGTAGATACCCCGCAACGT 59.048 52.381 0.00 0.00 0.00 3.99
4724 6830 1.188863 AGTAGATACCCCGCAACGTT 58.811 50.000 0.00 0.00 0.00 3.99
4725 6831 1.134907 AGTAGATACCCCGCAACGTTG 60.135 52.381 23.90 23.90 0.00 4.10
4746 6862 7.094805 ACGTTGCTACATGATTTCTTGTGTTAT 60.095 33.333 0.00 0.00 36.02 1.89
4747 6863 8.387354 CGTTGCTACATGATTTCTTGTGTTATA 58.613 33.333 0.00 0.00 36.02 0.98
4794 6910 6.645700 AAATGCAAATTATAACTGTTGGCG 57.354 33.333 2.69 0.00 0.00 5.69
4795 6911 4.775058 TGCAAATTATAACTGTTGGCGT 57.225 36.364 2.69 0.00 0.00 5.68
4803 6919 1.819928 AACTGTTGGCGTATGCATGA 58.180 45.000 10.16 0.00 45.35 3.07
4804 6920 2.042686 ACTGTTGGCGTATGCATGAT 57.957 45.000 10.16 0.00 45.35 2.45
4812 6941 7.304735 TGTTGGCGTATGCATGATAATAATTC 58.695 34.615 10.16 0.00 45.35 2.17
4836 6965 3.119319 TGGGCAAATAGGTCTGATGGTA 58.881 45.455 0.00 0.00 0.00 3.25
4837 6966 3.118038 TGGGCAAATAGGTCTGATGGTAC 60.118 47.826 0.00 0.00 0.00 3.34
4916 7045 2.446435 AGGTTTTGGATCCAATGACCG 58.554 47.619 33.32 0.00 42.35 4.79
4917 7046 2.167662 GGTTTTGGATCCAATGACCGT 58.832 47.619 29.96 0.00 34.88 4.83
4918 7047 2.094752 GGTTTTGGATCCAATGACCGTG 60.095 50.000 29.96 0.00 34.88 4.94
4922 7051 1.066215 TGGATCCAATGACCGTGTCAG 60.066 52.381 13.46 1.17 46.04 3.51
4931 7060 6.029607 CCAATGACCGTGTCAGATTATTTTG 58.970 40.000 11.50 8.98 46.04 2.44
4941 7070 7.484641 CGTGTCAGATTATTTTGTAAACATGGG 59.515 37.037 0.00 0.00 0.00 4.00
4942 7071 8.519526 GTGTCAGATTATTTTGTAAACATGGGA 58.480 33.333 0.00 0.00 0.00 4.37
5027 7156 6.590656 AACATGTTTGATAGATAAGGGGGA 57.409 37.500 4.92 0.00 0.00 4.81
5038 7167 9.155785 TGATAGATAAGGGGGAACTTACTTTAG 57.844 37.037 0.00 0.00 35.90 1.85
5068 7197 4.315803 ACGGGTTAAGACTTGAGATTGTG 58.684 43.478 0.00 0.00 0.00 3.33
5076 7205 5.690464 AGACTTGAGATTGTGGAAGCTAT 57.310 39.130 0.00 0.00 0.00 2.97
5078 7207 6.815089 AGACTTGAGATTGTGGAAGCTATAG 58.185 40.000 0.00 0.00 0.00 1.31
5081 7210 8.079211 ACTTGAGATTGTGGAAGCTATAGTAA 57.921 34.615 0.84 0.00 0.00 2.24
5083 7212 9.383519 CTTGAGATTGTGGAAGCTATAGTAAAA 57.616 33.333 0.84 0.00 0.00 1.52
5119 7248 6.914665 AGGGAGATCAACAATCCAATTCATA 58.085 36.000 0.00 0.00 34.67 2.15
5173 7302 9.631452 GAAAAGCAAATTATCAAAAGAGCTACT 57.369 29.630 0.00 0.00 0.00 2.57
5174 7303 9.631452 AAAAGCAAATTATCAAAAGAGCTACTC 57.369 29.630 0.00 0.00 0.00 2.59
5175 7304 7.326968 AGCAAATTATCAAAAGAGCTACTCC 57.673 36.000 0.00 0.00 0.00 3.85
5176 7305 6.319911 AGCAAATTATCAAAAGAGCTACTCCC 59.680 38.462 0.00 0.00 0.00 4.30
5177 7306 6.319911 GCAAATTATCAAAAGAGCTACTCCCT 59.680 38.462 0.00 0.00 0.00 4.20
5178 7307 7.467947 GCAAATTATCAAAAGAGCTACTCCCTC 60.468 40.741 0.00 0.00 0.00 4.30
5179 7308 7.444703 AATTATCAAAAGAGCTACTCCCTCT 57.555 36.000 0.00 0.00 41.25 3.69
5180 7309 4.751767 ATCAAAAGAGCTACTCCCTCTG 57.248 45.455 0.00 0.00 39.50 3.35
5181 7310 3.511477 TCAAAAGAGCTACTCCCTCTGT 58.489 45.455 0.00 0.00 39.50 3.41
5182 7311 4.673968 TCAAAAGAGCTACTCCCTCTGTA 58.326 43.478 0.00 0.00 39.50 2.74
5183 7312 5.084519 TCAAAAGAGCTACTCCCTCTGTAA 58.915 41.667 0.00 0.00 39.50 2.41
5184 7313 5.542635 TCAAAAGAGCTACTCCCTCTGTAAA 59.457 40.000 0.00 0.00 39.50 2.01
5185 7314 5.408880 AAAGAGCTACTCCCTCTGTAAAC 57.591 43.478 0.00 0.00 39.50 2.01
5186 7315 4.325084 AGAGCTACTCCCTCTGTAAACT 57.675 45.455 0.00 0.00 38.21 2.66
5187 7316 5.453866 AGAGCTACTCCCTCTGTAAACTA 57.546 43.478 0.00 0.00 38.21 2.24
5188 7317 5.828871 AGAGCTACTCCCTCTGTAAACTAA 58.171 41.667 0.00 0.00 38.21 2.24
5189 7318 6.436890 AGAGCTACTCCCTCTGTAAACTAAT 58.563 40.000 0.00 0.00 38.21 1.73
5190 7319 7.584532 AGAGCTACTCCCTCTGTAAACTAATA 58.415 38.462 0.00 0.00 38.21 0.98
5191 7320 8.228905 AGAGCTACTCCCTCTGTAAACTAATAT 58.771 37.037 0.00 0.00 38.21 1.28
5192 7321 9.517868 GAGCTACTCCCTCTGTAAACTAATATA 57.482 37.037 0.00 0.00 0.00 0.86
5193 7322 9.878737 AGCTACTCCCTCTGTAAACTAATATAA 57.121 33.333 0.00 0.00 0.00 0.98
5197 7326 9.939424 ACTCCCTCTGTAAACTAATATAAGAGT 57.061 33.333 0.00 0.00 0.00 3.24
5199 7328 9.710818 TCCCTCTGTAAACTAATATAAGAGTGT 57.289 33.333 0.00 0.00 0.00 3.55
5219 7348 9.742144 AGAGTGTTTAGATCACTAAAGTAGAGA 57.258 33.333 0.00 0.00 45.42 3.10
5228 7357 8.496872 GATCACTAAAGTAGAGATCTAAACGC 57.503 38.462 12.65 0.00 44.40 4.84
5229 7358 7.627298 TCACTAAAGTAGAGATCTAAACGCT 57.373 36.000 0.00 0.00 0.00 5.07
5230 7359 7.695820 TCACTAAAGTAGAGATCTAAACGCTC 58.304 38.462 0.00 0.00 0.00 5.03
5231 7360 7.553402 TCACTAAAGTAGAGATCTAAACGCTCT 59.447 37.037 0.00 0.00 41.53 4.09
5232 7361 8.185505 CACTAAAGTAGAGATCTAAACGCTCTT 58.814 37.037 0.00 0.00 39.54 2.85
5233 7362 9.393512 ACTAAAGTAGAGATCTAAACGCTCTTA 57.606 33.333 0.00 0.00 39.54 2.10
5246 7375 9.669353 TCTAAACGCTCTTATATTAGTTTACGG 57.331 33.333 0.00 0.00 34.29 4.02
5247 7376 9.669353 CTAAACGCTCTTATATTAGTTTACGGA 57.331 33.333 0.00 0.00 34.29 4.69
5248 7377 8.571461 AAACGCTCTTATATTAGTTTACGGAG 57.429 34.615 0.00 0.00 31.14 4.63
5249 7378 6.675987 ACGCTCTTATATTAGTTTACGGAGG 58.324 40.000 0.00 0.00 0.00 4.30
5250 7379 6.091437 CGCTCTTATATTAGTTTACGGAGGG 58.909 44.000 0.00 0.00 0.00 4.30
5251 7380 6.072286 CGCTCTTATATTAGTTTACGGAGGGA 60.072 42.308 0.00 0.00 34.63 4.20
5252 7381 7.314393 GCTCTTATATTAGTTTACGGAGGGAG 58.686 42.308 0.00 0.00 0.00 4.30
5253 7382 7.039853 GCTCTTATATTAGTTTACGGAGGGAGT 60.040 40.741 0.00 0.00 0.00 3.85
5254 7383 9.512588 CTCTTATATTAGTTTACGGAGGGAGTA 57.487 37.037 0.00 0.00 0.00 2.59
5255 7384 9.289782 TCTTATATTAGTTTACGGAGGGAGTAC 57.710 37.037 0.00 0.00 0.00 2.73
5256 7385 6.907853 ATATTAGTTTACGGAGGGAGTACC 57.092 41.667 0.00 0.00 40.67 3.34
5267 7396 1.330234 GGGAGTACCTACCTAGCTGC 58.670 60.000 0.00 0.00 30.17 5.25
5268 7397 0.953003 GGAGTACCTACCTAGCTGCG 59.047 60.000 0.00 0.00 0.00 5.18
5269 7398 0.953003 GAGTACCTACCTAGCTGCGG 59.047 60.000 0.00 0.00 0.00 5.69
5270 7399 0.258194 AGTACCTACCTAGCTGCGGT 59.742 55.000 13.25 13.25 38.55 5.68
5271 7400 0.667453 GTACCTACCTAGCTGCGGTC 59.333 60.000 12.23 0.00 35.98 4.79
5272 7401 0.256752 TACCTACCTAGCTGCGGTCA 59.743 55.000 12.23 0.99 35.98 4.02
5273 7402 1.321074 ACCTACCTAGCTGCGGTCAC 61.321 60.000 12.23 0.00 35.98 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
73 74 0.250234 CCCATTTGTCTCTCTCGCCA 59.750 55.000 0.00 0.00 0.00 5.69
216 217 2.017782 TCTACTGCACTGACGATCCTC 58.982 52.381 0.00 0.00 0.00 3.71
245 246 4.909305 CGATCGTAGCTTCATCTCTCTTTC 59.091 45.833 7.03 0.00 0.00 2.62
296 297 3.340814 AATCTCGCAGTTCCTCACAAT 57.659 42.857 0.00 0.00 0.00 2.71
368 369 5.248870 AGCTGTTCTTGACGAATTTTGTT 57.751 34.783 0.00 0.00 33.45 2.83
487 488 2.733517 CTTCGATTCGAGGTAAGCTCC 58.266 52.381 8.98 0.00 37.14 4.70
564 566 5.452496 GCTGTGCTTATCTTCTCCTACATCA 60.452 44.000 0.00 0.00 0.00 3.07
565 567 4.987912 GCTGTGCTTATCTTCTCCTACATC 59.012 45.833 0.00 0.00 0.00 3.06
566 568 4.500545 CGCTGTGCTTATCTTCTCCTACAT 60.501 45.833 0.00 0.00 0.00 2.29
567 569 3.181486 CGCTGTGCTTATCTTCTCCTACA 60.181 47.826 0.00 0.00 0.00 2.74
592 705 3.622060 TAAAGCACCTCCGGCCTGC 62.622 63.158 5.80 5.80 0.00 4.85
599 712 2.350484 GCACGAAACTTAAAGCACCTCC 60.350 50.000 0.00 0.00 0.00 4.30
600 713 2.548480 AGCACGAAACTTAAAGCACCTC 59.452 45.455 0.00 0.00 0.00 3.85
601 714 2.572290 AGCACGAAACTTAAAGCACCT 58.428 42.857 0.00 0.00 0.00 4.00
602 715 4.680171 ATAGCACGAAACTTAAAGCACC 57.320 40.909 0.00 0.00 0.00 5.01
604 717 6.425721 ACTTGTATAGCACGAAACTTAAAGCA 59.574 34.615 0.00 0.00 0.00 3.91
605 718 6.828672 ACTTGTATAGCACGAAACTTAAAGC 58.171 36.000 0.00 0.00 0.00 3.51
617 730 7.970384 TGTATAGCACAAAACTTGTATAGCAC 58.030 34.615 3.97 0.00 43.23 4.40
624 737 4.760204 GGACCTGTATAGCACAAAACTTGT 59.240 41.667 0.00 0.00 46.75 3.16
627 740 4.634012 TGGACCTGTATAGCACAAAACT 57.366 40.909 0.00 0.00 36.48 2.66
629 742 6.717289 ACTATTGGACCTGTATAGCACAAAA 58.283 36.000 0.00 0.00 36.48 2.44
630 743 6.308015 ACTATTGGACCTGTATAGCACAAA 57.692 37.500 0.00 0.00 36.48 2.83
631 744 5.950544 ACTATTGGACCTGTATAGCACAA 57.049 39.130 0.00 0.00 36.48 3.33
632 745 7.426606 TTTACTATTGGACCTGTATAGCACA 57.573 36.000 0.00 0.00 35.30 4.57
633 746 8.904099 ATTTTACTATTGGACCTGTATAGCAC 57.096 34.615 0.00 0.00 0.00 4.40
634 747 8.710239 TGATTTTACTATTGGACCTGTATAGCA 58.290 33.333 0.00 0.00 0.00 3.49
635 748 9.209175 CTGATTTTACTATTGGACCTGTATAGC 57.791 37.037 0.00 0.00 0.00 2.97
638 751 8.768397 TGTCTGATTTTACTATTGGACCTGTAT 58.232 33.333 0.00 0.00 0.00 2.29
639 752 8.141298 TGTCTGATTTTACTATTGGACCTGTA 57.859 34.615 0.00 0.00 0.00 2.74
640 753 7.016153 TGTCTGATTTTACTATTGGACCTGT 57.984 36.000 0.00 0.00 0.00 4.00
641 754 7.148239 GGTTGTCTGATTTTACTATTGGACCTG 60.148 40.741 0.00 0.00 0.00 4.00
642 755 6.884836 GGTTGTCTGATTTTACTATTGGACCT 59.115 38.462 0.00 0.00 0.00 3.85
643 756 6.657541 TGGTTGTCTGATTTTACTATTGGACC 59.342 38.462 0.00 0.00 0.00 4.46
644 757 7.681939 TGGTTGTCTGATTTTACTATTGGAC 57.318 36.000 0.00 0.00 0.00 4.02
645 758 8.573035 GTTTGGTTGTCTGATTTTACTATTGGA 58.427 33.333 0.00 0.00 0.00 3.53
699 812 1.340088 TTGCATGTGTGAAGCCCAAT 58.660 45.000 0.00 0.00 0.00 3.16
706 819 3.370276 CGTGTTTGATTGCATGTGTGAA 58.630 40.909 0.00 0.00 0.00 3.18
714 827 1.268352 GTAAGGGCGTGTTTGATTGCA 59.732 47.619 0.00 0.00 0.00 4.08
719 832 2.352388 GCTATGTAAGGGCGTGTTTGA 58.648 47.619 0.00 0.00 0.00 2.69
734 847 1.226686 GATGCCACTGCCTCGCTATG 61.227 60.000 0.00 0.00 36.33 2.23
891 2448 0.743701 GGGCACTGATCTGACTGCAG 60.744 60.000 13.48 13.48 43.67 4.41
1750 3310 1.401539 GGAGTACAACGTACGTGGTCC 60.402 57.143 30.74 21.76 33.72 4.46
1767 3327 1.497161 ATACTTGGGAACGGAGGGAG 58.503 55.000 0.00 0.00 0.00 4.30
1768 3328 2.852714 TATACTTGGGAACGGAGGGA 57.147 50.000 0.00 0.00 0.00 4.20
1769 3329 2.770232 ACTTATACTTGGGAACGGAGGG 59.230 50.000 0.00 0.00 0.00 4.30
1770 3330 3.705072 AGACTTATACTTGGGAACGGAGG 59.295 47.826 0.00 0.00 0.00 4.30
1771 3331 5.340439 AAGACTTATACTTGGGAACGGAG 57.660 43.478 0.00 0.00 0.00 4.63
1772 3332 5.482878 AGAAAGACTTATACTTGGGAACGGA 59.517 40.000 0.00 0.00 0.00 4.69
1773 3333 5.731591 AGAAAGACTTATACTTGGGAACGG 58.268 41.667 0.00 0.00 0.00 4.44
1774 3334 7.769220 TCTAGAAAGACTTATACTTGGGAACG 58.231 38.462 0.00 0.00 0.00 3.95
1775 3335 8.968969 TCTCTAGAAAGACTTATACTTGGGAAC 58.031 37.037 0.00 0.00 0.00 3.62
1776 3336 9.716556 ATCTCTAGAAAGACTTATACTTGGGAA 57.283 33.333 0.00 0.00 0.00 3.97
1777 3337 9.716556 AATCTCTAGAAAGACTTATACTTGGGA 57.283 33.333 0.00 0.00 0.00 4.37
1785 3345 9.883142 CCTGTTGAAATCTCTAGAAAGACTTAT 57.117 33.333 0.00 0.00 0.00 1.73
1786 3346 8.871125 ACCTGTTGAAATCTCTAGAAAGACTTA 58.129 33.333 0.00 0.00 0.00 2.24
1787 3347 7.659390 CACCTGTTGAAATCTCTAGAAAGACTT 59.341 37.037 0.00 0.00 0.00 3.01
1788 3348 7.015682 TCACCTGTTGAAATCTCTAGAAAGACT 59.984 37.037 0.00 0.00 0.00 3.24
1789 3349 7.117092 GTCACCTGTTGAAATCTCTAGAAAGAC 59.883 40.741 0.00 0.00 35.39 3.01
1790 3350 7.015682 AGTCACCTGTTGAAATCTCTAGAAAGA 59.984 37.037 0.00 0.00 35.39 2.52
1791 3351 7.158021 AGTCACCTGTTGAAATCTCTAGAAAG 58.842 38.462 0.00 0.00 35.39 2.62
1792 3352 7.067496 AGTCACCTGTTGAAATCTCTAGAAA 57.933 36.000 0.00 0.00 35.39 2.52
1793 3353 6.672266 AGTCACCTGTTGAAATCTCTAGAA 57.328 37.500 0.00 0.00 35.39 2.10
1794 3354 6.719829 TGTAGTCACCTGTTGAAATCTCTAGA 59.280 38.462 0.00 0.00 35.39 2.43
1795 3355 6.925211 TGTAGTCACCTGTTGAAATCTCTAG 58.075 40.000 0.00 0.00 35.39 2.43
1796 3356 6.911250 TGTAGTCACCTGTTGAAATCTCTA 57.089 37.500 0.00 0.00 35.39 2.43
1797 3357 5.808366 TGTAGTCACCTGTTGAAATCTCT 57.192 39.130 0.00 0.00 35.39 3.10
1798 3358 6.253727 CGTATGTAGTCACCTGTTGAAATCTC 59.746 42.308 0.00 0.00 35.39 2.75
1799 3359 6.071560 TCGTATGTAGTCACCTGTTGAAATCT 60.072 38.462 0.00 0.00 35.39 2.40
1800 3360 6.097356 TCGTATGTAGTCACCTGTTGAAATC 58.903 40.000 0.00 0.00 35.39 2.17
1801 3361 6.032956 TCGTATGTAGTCACCTGTTGAAAT 57.967 37.500 0.00 0.00 35.39 2.17
1802 3362 5.456548 TCGTATGTAGTCACCTGTTGAAA 57.543 39.130 0.00 0.00 35.39 2.69
1803 3363 5.456548 TTCGTATGTAGTCACCTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
1804 3364 4.617530 GCTTCGTATGTAGTCACCTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
1805 3365 3.612860 GCTTCGTATGTAGTCACCTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
1806 3366 3.257375 TGCTTCGTATGTAGTCACCTGTT 59.743 43.478 0.00 0.00 0.00 3.16
1807 3367 2.823747 TGCTTCGTATGTAGTCACCTGT 59.176 45.455 0.00 0.00 0.00 4.00
1808 3368 3.503827 TGCTTCGTATGTAGTCACCTG 57.496 47.619 0.00 0.00 0.00 4.00
1809 3369 4.530710 TTTGCTTCGTATGTAGTCACCT 57.469 40.909 0.00 0.00 0.00 4.00
1810 3370 5.350365 TCATTTTGCTTCGTATGTAGTCACC 59.650 40.000 0.00 0.00 0.00 4.02
1811 3371 6.090898 ACTCATTTTGCTTCGTATGTAGTCAC 59.909 38.462 0.00 0.00 0.00 3.67
1812 3372 6.090763 CACTCATTTTGCTTCGTATGTAGTCA 59.909 38.462 0.00 0.00 0.00 3.41
1813 3373 6.310467 TCACTCATTTTGCTTCGTATGTAGTC 59.690 38.462 0.00 0.00 0.00 2.59
1814 3374 6.163476 TCACTCATTTTGCTTCGTATGTAGT 58.837 36.000 0.00 0.00 0.00 2.73
1815 3375 6.647212 TCACTCATTTTGCTTCGTATGTAG 57.353 37.500 0.00 0.00 0.00 2.74
1816 3376 7.549134 AGATTCACTCATTTTGCTTCGTATGTA 59.451 33.333 0.00 0.00 0.00 2.29
1817 3377 5.940192 TTCACTCATTTTGCTTCGTATGT 57.060 34.783 0.00 0.00 0.00 2.29
1818 3378 6.779117 AGATTCACTCATTTTGCTTCGTATG 58.221 36.000 0.00 0.00 0.00 2.39
1819 3379 6.992063 AGATTCACTCATTTTGCTTCGTAT 57.008 33.333 0.00 0.00 0.00 3.06
1820 3380 6.871492 TGTAGATTCACTCATTTTGCTTCGTA 59.129 34.615 0.00 0.00 0.00 3.43
1821 3381 5.700832 TGTAGATTCACTCATTTTGCTTCGT 59.299 36.000 0.00 0.00 0.00 3.85
1822 3382 6.017933 GTGTAGATTCACTCATTTTGCTTCG 58.982 40.000 0.00 0.00 35.68 3.79
1823 3383 6.798959 GTGTGTAGATTCACTCATTTTGCTTC 59.201 38.462 0.00 0.00 38.90 3.86
1824 3384 6.488006 AGTGTGTAGATTCACTCATTTTGCTT 59.512 34.615 0.00 0.00 40.28 3.91
1825 3385 6.000219 AGTGTGTAGATTCACTCATTTTGCT 59.000 36.000 0.00 0.00 40.28 3.91
1826 3386 6.246420 AGTGTGTAGATTCACTCATTTTGC 57.754 37.500 0.00 0.00 40.28 3.68
1840 3400 9.529325 GCATGTAGACATATTTTAGTGTGTAGA 57.471 33.333 0.00 0.00 34.26 2.59
1841 3401 9.313118 TGCATGTAGACATATTTTAGTGTGTAG 57.687 33.333 0.00 0.00 34.26 2.74
1842 3402 9.830975 ATGCATGTAGACATATTTTAGTGTGTA 57.169 29.630 0.00 0.00 34.26 2.90
1843 3403 8.737168 ATGCATGTAGACATATTTTAGTGTGT 57.263 30.769 0.00 0.00 34.26 3.72
1844 3404 8.285394 GGATGCATGTAGACATATTTTAGTGTG 58.715 37.037 2.46 0.00 34.26 3.82
1845 3405 7.171508 CGGATGCATGTAGACATATTTTAGTGT 59.828 37.037 2.46 0.00 34.26 3.55
1846 3406 7.171508 ACGGATGCATGTAGACATATTTTAGTG 59.828 37.037 2.46 0.00 34.26 2.74
1847 3407 7.217200 ACGGATGCATGTAGACATATTTTAGT 58.783 34.615 2.46 0.00 34.26 2.24
1848 3408 7.658179 ACGGATGCATGTAGACATATTTTAG 57.342 36.000 2.46 0.00 34.26 1.85
1850 3410 9.890629 ATATACGGATGCATGTAGACATATTTT 57.109 29.630 2.46 0.00 34.26 1.82
1851 3411 9.890629 AATATACGGATGCATGTAGACATATTT 57.109 29.630 2.46 0.00 34.26 1.40
1859 3419 9.981114 TGGAATATAATATACGGATGCATGTAG 57.019 33.333 2.46 0.00 0.00 2.74
1861 3421 9.851686 AATGGAATATAATATACGGATGCATGT 57.148 29.630 2.46 0.00 0.00 3.21
1898 3458 7.985752 CCTCCGTTCCTAAATATAAGTCTTTGT 59.014 37.037 0.00 0.00 0.00 2.83
1899 3459 7.441458 CCCTCCGTTCCTAAATATAAGTCTTTG 59.559 40.741 0.00 0.00 0.00 2.77
1900 3460 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
1901 3461 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
1902 3462 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
1903 3463 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
1904 3464 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
1905 3465 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
1906 3466 8.731591 AATACTCCCTCCGTTCCTAAATATAA 57.268 34.615 0.00 0.00 0.00 0.98
1907 3467 8.731591 AAATACTCCCTCCGTTCCTAAATATA 57.268 34.615 0.00 0.00 0.00 0.86
1908 3468 7.256583 GGAAATACTCCCTCCGTTCCTAAATAT 60.257 40.741 0.00 0.00 38.44 1.28
1909 3469 6.042437 GGAAATACTCCCTCCGTTCCTAAATA 59.958 42.308 0.00 0.00 38.44 1.40
1910 3470 5.163227 GGAAATACTCCCTCCGTTCCTAAAT 60.163 44.000 0.00 0.00 38.44 1.40
1911 3471 4.162888 GGAAATACTCCCTCCGTTCCTAAA 59.837 45.833 0.00 0.00 38.44 1.85
1912 3472 3.708121 GGAAATACTCCCTCCGTTCCTAA 59.292 47.826 0.00 0.00 38.44 2.69
1913 3473 3.303049 GGAAATACTCCCTCCGTTCCTA 58.697 50.000 0.00 0.00 38.44 2.94
1914 3474 2.117051 GGAAATACTCCCTCCGTTCCT 58.883 52.381 0.00 0.00 38.44 3.36
1915 3475 2.616634 GGAAATACTCCCTCCGTTCC 57.383 55.000 0.00 0.00 38.44 3.62
1924 3484 6.951062 AGTACTACGTTAGGGAAATACTCC 57.049 41.667 0.00 0.00 44.54 3.85
1925 3485 8.669946 ACTAGTACTACGTTAGGGAAATACTC 57.330 38.462 0.00 0.00 0.00 2.59
1926 3486 9.549078 GTACTAGTACTACGTTAGGGAAATACT 57.451 37.037 23.17 0.00 33.45 2.12
1927 3487 9.549078 AGTACTAGTACTACGTTAGGGAAATAC 57.451 37.037 29.96 2.92 43.98 1.89
1976 3536 4.041567 ACAAGGAAGTACATGATGACACCA 59.958 41.667 0.00 0.00 0.00 4.17
2008 3568 9.953697 CTAAAGTACTGATCTAAACGCTCTTAT 57.046 33.333 0.00 0.00 0.00 1.73
2009 3569 8.954350 ACTAAAGTACTGATCTAAACGCTCTTA 58.046 33.333 0.00 0.00 0.00 2.10
2010 3570 7.755822 CACTAAAGTACTGATCTAAACGCTCTT 59.244 37.037 0.00 0.00 0.00 2.85
2011 3571 7.094291 ACACTAAAGTACTGATCTAAACGCTCT 60.094 37.037 0.00 0.00 0.00 4.09
2012 3572 7.028361 ACACTAAAGTACTGATCTAAACGCTC 58.972 38.462 0.00 0.00 0.00 5.03
2013 3573 6.921914 ACACTAAAGTACTGATCTAAACGCT 58.078 36.000 0.00 0.00 0.00 5.07
2014 3574 7.578169 AACACTAAAGTACTGATCTAAACGC 57.422 36.000 0.00 0.00 0.00 4.84
2053 3613 9.632638 TGTACTACTCCCTTCGTAAACTAATAT 57.367 33.333 0.00 0.00 0.00 1.28
2054 3614 9.632638 ATGTACTACTCCCTTCGTAAACTAATA 57.367 33.333 0.00 0.00 0.00 0.98
2055 3615 7.944729 TGTACTACTCCCTTCGTAAACTAAT 57.055 36.000 0.00 0.00 0.00 1.73
2056 3616 7.944729 ATGTACTACTCCCTTCGTAAACTAA 57.055 36.000 0.00 0.00 0.00 2.24
2057 3617 7.224753 CGTATGTACTACTCCCTTCGTAAACTA 59.775 40.741 0.00 0.00 0.00 2.24
2058 3618 6.037610 CGTATGTACTACTCCCTTCGTAAACT 59.962 42.308 0.00 0.00 0.00 2.66
2059 3619 6.183360 ACGTATGTACTACTCCCTTCGTAAAC 60.183 42.308 0.00 0.00 0.00 2.01
2060 3620 5.880332 ACGTATGTACTACTCCCTTCGTAAA 59.120 40.000 0.00 0.00 0.00 2.01
2061 3621 5.428253 ACGTATGTACTACTCCCTTCGTAA 58.572 41.667 0.00 0.00 0.00 3.18
2062 3622 5.023533 ACGTATGTACTACTCCCTTCGTA 57.976 43.478 0.00 0.00 0.00 3.43
2063 3623 3.878778 ACGTATGTACTACTCCCTTCGT 58.121 45.455 0.00 0.00 0.00 3.85
2064 3624 5.468072 ACATACGTATGTACTACTCCCTTCG 59.532 44.000 34.01 7.95 44.54 3.79
2065 3625 6.874288 ACATACGTATGTACTACTCCCTTC 57.126 41.667 34.01 0.00 44.54 3.46
2066 3626 7.340232 TGAAACATACGTATGTACTACTCCCTT 59.660 37.037 34.77 23.49 45.55 3.95
2067 3627 6.830324 TGAAACATACGTATGTACTACTCCCT 59.170 38.462 34.77 17.43 45.55 4.20
2068 3628 7.031226 TGAAACATACGTATGTACTACTCCC 57.969 40.000 34.77 19.42 45.55 4.30
2069 3629 6.636044 GCTGAAACATACGTATGTACTACTCC 59.364 42.308 34.77 20.23 45.55 3.85
2070 3630 7.165483 GTGCTGAAACATACGTATGTACTACTC 59.835 40.741 34.77 25.02 45.55 2.59
2071 3631 6.971184 GTGCTGAAACATACGTATGTACTACT 59.029 38.462 34.77 20.05 45.55 2.57
2072 3632 6.748658 TGTGCTGAAACATACGTATGTACTAC 59.251 38.462 34.77 25.86 45.55 2.73
2073 3633 6.854778 TGTGCTGAAACATACGTATGTACTA 58.145 36.000 34.77 23.30 45.55 1.82
2074 3634 5.716094 TGTGCTGAAACATACGTATGTACT 58.284 37.500 34.77 26.08 45.55 2.73
2079 3639 5.641636 TGACAATGTGCTGAAACATACGTAT 59.358 36.000 1.14 1.14 39.89 3.06
2161 3891 3.009301 CGTGAGACTACGGTTTGACTT 57.991 47.619 0.00 0.00 40.22 3.01
2218 3991 1.719063 ATGTGAGGTGGGCAGTGGTT 61.719 55.000 0.00 0.00 0.00 3.67
2223 3996 1.747355 GATTTCATGTGAGGTGGGCAG 59.253 52.381 0.00 0.00 0.00 4.85
2242 4015 4.593206 AGATGTATCAGCTTAAATCCGGGA 59.407 41.667 0.00 0.00 0.00 5.14
2271 4044 5.875224 TCTTGAACTGTCCATTTGATACCA 58.125 37.500 0.00 0.00 0.00 3.25
2276 4049 5.684704 AGAACTCTTGAACTGTCCATTTGA 58.315 37.500 0.00 0.00 0.00 2.69
2277 4050 6.148480 CCTAGAACTCTTGAACTGTCCATTTG 59.852 42.308 0.00 0.00 0.00 2.32
2283 4058 4.241681 CAGCCTAGAACTCTTGAACTGTC 58.758 47.826 0.00 0.00 0.00 3.51
2350 4130 3.074412 ACGAGAAAATCACCTGCGAATT 58.926 40.909 0.00 0.00 0.00 2.17
2351 4131 2.699954 ACGAGAAAATCACCTGCGAAT 58.300 42.857 0.00 0.00 0.00 3.34
2352 4132 2.163818 ACGAGAAAATCACCTGCGAA 57.836 45.000 0.00 0.00 0.00 4.70
2353 4133 2.230508 AGTACGAGAAAATCACCTGCGA 59.769 45.455 0.00 0.00 0.00 5.10
2354 4134 2.345641 CAGTACGAGAAAATCACCTGCG 59.654 50.000 0.00 0.00 0.00 5.18
2399 4179 3.071479 GGAGCCGTTCAAATGTACTTCA 58.929 45.455 0.00 0.00 0.00 3.02
2407 4187 2.799126 TACCATGGAGCCGTTCAAAT 57.201 45.000 21.47 0.00 0.00 2.32
2518 4298 1.927174 GCGCTCGTGTGTCTTATGATT 59.073 47.619 0.00 0.00 0.00 2.57
2522 4302 0.523546 CTCGCGCTCGTGTGTCTTAT 60.524 55.000 5.56 0.00 36.96 1.73
2575 4355 5.581085 AGTTTAGTCTACCAATCAATGCGAC 59.419 40.000 0.00 0.00 0.00 5.19
2784 4564 4.262463 CCAGAGCCTGACAGTACACTTAAA 60.262 45.833 0.93 0.00 32.44 1.52
2880 4927 2.938956 AGCTAGTGCAAGGTCAAACT 57.061 45.000 0.00 0.00 42.74 2.66
3005 5053 6.695429 TGCAGATTGATCCAGATATAGACAC 58.305 40.000 0.00 0.00 0.00 3.67
3007 5055 7.784037 AGATGCAGATTGATCCAGATATAGAC 58.216 38.462 0.00 0.00 0.00 2.59
3022 5070 2.947652 CCAATCCAACGAGATGCAGATT 59.052 45.455 0.00 0.00 0.00 2.40
3029 5077 1.066143 ACGAAGCCAATCCAACGAGAT 60.066 47.619 0.00 0.00 0.00 2.75
3045 5093 0.526739 CTGACGTGTGGTGTGACGAA 60.527 55.000 0.00 0.00 38.94 3.85
3081 5129 0.944386 GTGCCGGTATATGCCACTTG 59.056 55.000 10.70 0.00 0.00 3.16
3125 5181 3.699038 AGCTGGTTTGTTAACTGCAAAGA 59.301 39.130 7.22 0.00 36.63 2.52
3126 5182 4.044426 GAGCTGGTTTGTTAACTGCAAAG 58.956 43.478 7.22 1.04 36.63 2.77
3146 5202 5.463724 GCTTTAGTTGGTTATCCTGATCGAG 59.536 44.000 0.00 0.00 34.23 4.04
3158 5214 9.842775 ACTTTACTACTTTAGCTTTAGTTGGTT 57.157 29.630 5.83 0.00 0.00 3.67
3250 5322 4.343526 CAGCACCCATCAGATAGAGTACTT 59.656 45.833 0.00 0.00 0.00 2.24
3252 5324 3.006323 CCAGCACCCATCAGATAGAGTAC 59.994 52.174 0.00 0.00 0.00 2.73
3367 5451 3.525545 GCGTCCTCCCCCTCGTAC 61.526 72.222 0.00 0.00 0.00 3.67
3430 5514 1.226717 GAAGAGGCCGTACTGAGCG 60.227 63.158 0.00 0.00 0.00 5.03
3595 5679 1.012486 CGTTGTACGCCTCCTGGAAC 61.012 60.000 0.00 0.00 33.65 3.62
3619 5703 0.816825 CGATGATGGCCTGGAACCTG 60.817 60.000 3.32 0.00 0.00 4.00
3661 5745 3.145551 AGGACGGCGGCGAAGTAT 61.146 61.111 38.93 15.77 0.00 2.12
3757 5841 2.755469 TAGTGGTCGTACGGGCCC 60.755 66.667 13.57 13.57 0.00 5.80
3763 5847 1.515736 GCGCCAGTAGTGGTCGTAC 60.516 63.158 24.57 12.30 46.96 3.67
4234 6318 3.411114 ATGGATGGGCGAGGTGCTG 62.411 63.158 0.00 0.00 45.43 4.41
4240 6324 4.240103 TGCGGATGGATGGGCGAG 62.240 66.667 0.00 0.00 0.00 5.03
4246 6330 1.656818 AAAAGCGGTGCGGATGGATG 61.657 55.000 0.00 0.00 0.00 3.51
4267 6351 7.755373 GCTAAGTTTTCAAAGTTCCATCATACC 59.245 37.037 0.00 0.00 33.79 2.73
4361 6445 8.109705 TGACAGACAGCACATATGTAATTTTT 57.890 30.769 8.32 0.00 0.00 1.94
4362 6446 7.686438 TGACAGACAGCACATATGTAATTTT 57.314 32.000 8.32 0.00 0.00 1.82
4363 6447 7.772292 AGATGACAGACAGCACATATGTAATTT 59.228 33.333 8.32 0.00 37.37 1.82
4364 6448 7.278135 AGATGACAGACAGCACATATGTAATT 58.722 34.615 8.32 0.00 37.37 1.40
4365 6449 6.824553 AGATGACAGACAGCACATATGTAAT 58.175 36.000 8.32 0.00 37.37 1.89
4366 6450 6.225981 AGATGACAGACAGCACATATGTAA 57.774 37.500 8.32 0.00 37.37 2.41
4367 6451 5.859205 AGATGACAGACAGCACATATGTA 57.141 39.130 8.32 0.00 37.37 2.29
4368 6452 4.750021 AGATGACAGACAGCACATATGT 57.250 40.909 1.41 1.41 37.37 2.29
4369 6453 4.208666 CGAAGATGACAGACAGCACATATG 59.791 45.833 0.00 0.00 37.37 1.78
4370 6454 4.142071 ACGAAGATGACAGACAGCACATAT 60.142 41.667 0.00 0.00 37.37 1.78
4371 6455 3.193479 ACGAAGATGACAGACAGCACATA 59.807 43.478 0.00 0.00 37.37 2.29
4372 6456 2.028658 ACGAAGATGACAGACAGCACAT 60.029 45.455 0.00 0.00 37.37 3.21
4373 6457 1.341209 ACGAAGATGACAGACAGCACA 59.659 47.619 0.00 0.00 37.37 4.57
4374 6458 1.989165 GACGAAGATGACAGACAGCAC 59.011 52.381 0.00 0.00 37.37 4.40
4375 6459 1.889170 AGACGAAGATGACAGACAGCA 59.111 47.619 0.00 0.00 37.37 4.41
4376 6460 2.525055 GAGACGAAGATGACAGACAGC 58.475 52.381 0.00 0.00 34.85 4.40
4377 6461 3.143807 GGAGACGAAGATGACAGACAG 57.856 52.381 0.00 0.00 0.00 3.51
4392 6476 1.223187 TTTTGAGAAACGCCGGAGAC 58.777 50.000 13.83 2.86 0.00 3.36
4393 6477 1.956297 TTTTTGAGAAACGCCGGAGA 58.044 45.000 13.83 0.00 0.00 3.71
4501 6590 5.032100 AGCATAGCTAGTTACATACGACG 57.968 43.478 0.00 0.00 36.99 5.12
4641 6737 6.702449 AATATCAGCCCACCAACTCATATA 57.298 37.500 0.00 0.00 0.00 0.86
4642 6738 5.589367 AATATCAGCCCACCAACTCATAT 57.411 39.130 0.00 0.00 0.00 1.78
4643 6739 5.132502 CAAATATCAGCCCACCAACTCATA 58.867 41.667 0.00 0.00 0.00 2.15
4644 6740 3.956199 CAAATATCAGCCCACCAACTCAT 59.044 43.478 0.00 0.00 0.00 2.90
4645 6741 3.355378 CAAATATCAGCCCACCAACTCA 58.645 45.455 0.00 0.00 0.00 3.41
4646 6742 2.689983 CCAAATATCAGCCCACCAACTC 59.310 50.000 0.00 0.00 0.00 3.01
4647 6743 2.042979 ACCAAATATCAGCCCACCAACT 59.957 45.455 0.00 0.00 0.00 3.16
4649 6745 2.830923 CAACCAAATATCAGCCCACCAA 59.169 45.455 0.00 0.00 0.00 3.67
4651 6747 1.136891 GCAACCAAATATCAGCCCACC 59.863 52.381 0.00 0.00 0.00 4.61
4682 6788 4.618635 AGTACCTAAAGTCTTAGACCCCC 58.381 47.826 8.96 0.00 37.32 5.40
4691 6797 7.474079 CGGGGTATCTACTAGTACCTAAAGTCT 60.474 44.444 11.46 0.00 40.17 3.24
4696 6802 4.350816 TGCGGGGTATCTACTAGTACCTAA 59.649 45.833 11.46 0.00 40.17 2.69
4697 6803 3.909995 TGCGGGGTATCTACTAGTACCTA 59.090 47.826 11.46 0.00 40.17 3.08
4701 6807 3.141398 CGTTGCGGGGTATCTACTAGTA 58.859 50.000 1.89 1.89 0.00 1.82
4702 6808 1.952296 CGTTGCGGGGTATCTACTAGT 59.048 52.381 0.00 0.00 0.00 2.57
4703 6809 1.952296 ACGTTGCGGGGTATCTACTAG 59.048 52.381 0.00 0.00 0.00 2.57
4704 6810 2.057137 ACGTTGCGGGGTATCTACTA 57.943 50.000 0.00 0.00 0.00 1.82
4706 6812 1.283736 CAACGTTGCGGGGTATCTAC 58.716 55.000 16.51 0.00 0.00 2.59
4707 6813 0.460635 GCAACGTTGCGGGGTATCTA 60.461 55.000 34.84 0.00 45.11 1.98
4708 6814 1.743995 GCAACGTTGCGGGGTATCT 60.744 57.895 34.84 0.00 45.11 1.98
4718 6824 5.340403 CACAAGAAATCATGTAGCAACGTTG 59.660 40.000 23.90 23.90 0.00 4.10
4719 6825 5.008613 ACACAAGAAATCATGTAGCAACGTT 59.991 36.000 0.00 0.00 0.00 3.99
4721 6827 5.034554 ACACAAGAAATCATGTAGCAACG 57.965 39.130 0.00 0.00 0.00 4.10
4723 6829 9.448438 AGTATAACACAAGAAATCATGTAGCAA 57.552 29.630 0.00 0.00 0.00 3.91
4724 6830 8.882736 CAGTATAACACAAGAAATCATGTAGCA 58.117 33.333 0.00 0.00 0.00 3.49
4725 6831 8.338259 CCAGTATAACACAAGAAATCATGTAGC 58.662 37.037 0.00 0.00 0.00 3.58
4726 6832 9.383519 ACCAGTATAACACAAGAAATCATGTAG 57.616 33.333 0.00 0.00 0.00 2.74
4728 6834 9.905713 ATACCAGTATAACACAAGAAATCATGT 57.094 29.630 0.00 0.00 0.00 3.21
4731 6837 9.599866 CTCATACCAGTATAACACAAGAAATCA 57.400 33.333 0.00 0.00 0.00 2.57
4747 6863 9.807921 TTTTAATTCTTCCTTTCTCATACCAGT 57.192 29.630 0.00 0.00 0.00 4.00
4778 6894 6.262049 TCATGCATACGCCAACAGTTATAATT 59.738 34.615 0.00 0.00 37.32 1.40
4782 6898 3.540617 TCATGCATACGCCAACAGTTAT 58.459 40.909 0.00 0.00 37.32 1.89
4783 6899 2.979240 TCATGCATACGCCAACAGTTA 58.021 42.857 0.00 0.00 37.32 2.24
4791 6907 7.433131 CCATTGAATTATTATCATGCATACGCC 59.567 37.037 0.00 0.00 37.32 5.68
4794 6910 8.252417 TGCCCATTGAATTATTATCATGCATAC 58.748 33.333 0.00 0.00 0.00 2.39
4795 6911 8.363761 TGCCCATTGAATTATTATCATGCATA 57.636 30.769 0.00 0.00 0.00 3.14
4803 6919 9.605951 AGACCTATTTGCCCATTGAATTATTAT 57.394 29.630 0.00 0.00 0.00 1.28
4804 6920 8.859090 CAGACCTATTTGCCCATTGAATTATTA 58.141 33.333 0.00 0.00 0.00 0.98
4812 6941 3.319972 CCATCAGACCTATTTGCCCATTG 59.680 47.826 0.00 0.00 0.00 2.82
4846 6975 8.963130 CATTTGATGCTTTAAGTTACACGAAAA 58.037 29.630 0.00 0.00 0.00 2.29
4847 6976 8.500837 CATTTGATGCTTTAAGTTACACGAAA 57.499 30.769 0.00 0.00 0.00 3.46
4879 7008 7.562088 TCCAAAACCTTACTGTTTTCCTTATGT 59.438 33.333 0.00 0.00 44.38 2.29
4916 7045 8.519526 TCCCATGTTTACAAAATAATCTGACAC 58.480 33.333 0.00 0.00 0.00 3.67
4917 7046 8.642935 TCCCATGTTTACAAAATAATCTGACA 57.357 30.769 0.00 0.00 0.00 3.58
4918 7047 9.921637 TTTCCCATGTTTACAAAATAATCTGAC 57.078 29.630 0.00 0.00 0.00 3.51
4967 7096 2.225066 TGCCCATATATCTTGCATGCCA 60.225 45.455 16.68 2.49 0.00 4.92
5015 7144 6.904654 TGCTAAAGTAAGTTCCCCCTTATCTA 59.095 38.462 0.00 0.00 30.13 1.98
5027 7156 4.062991 CCGTCAAGGTGCTAAAGTAAGTT 58.937 43.478 0.00 0.00 34.51 2.66
5038 7167 1.154197 GTCTTAACCCGTCAAGGTGC 58.846 55.000 0.00 0.00 40.05 5.01
5081 7210 7.069826 TGTTGATCTCCCTTGAAGTTGATTTTT 59.930 33.333 0.00 0.00 0.00 1.94
5083 7212 6.070656 TGTTGATCTCCCTTGAAGTTGATTT 58.929 36.000 0.00 0.00 0.00 2.17
5086 7215 4.705110 TGTTGATCTCCCTTGAAGTTGA 57.295 40.909 0.00 0.00 0.00 3.18
5088 7217 5.012893 GGATTGTTGATCTCCCTTGAAGTT 58.987 41.667 0.00 0.00 35.02 2.66
5146 7275 9.410556 GTAGCTCTTTTGATAATTTGCTTTTCA 57.589 29.630 0.00 0.00 0.00 2.69
5147 7276 9.631452 AGTAGCTCTTTTGATAATTTGCTTTTC 57.369 29.630 0.00 0.00 0.00 2.29
5157 7286 5.721960 ACAGAGGGAGTAGCTCTTTTGATAA 59.278 40.000 0.00 0.00 0.00 1.75
5173 7302 9.710818 ACACTCTTATATTAGTTTACAGAGGGA 57.289 33.333 2.59 0.00 34.50 4.20
5193 7322 9.742144 TCTCTACTTTAGTGATCTAAACACTCT 57.258 33.333 0.00 0.00 45.58 3.24
5204 7333 8.228035 AGCGTTTAGATCTCTACTTTAGTGAT 57.772 34.615 0.00 0.00 40.56 3.06
5205 7334 7.553402 AGAGCGTTTAGATCTCTACTTTAGTGA 59.447 37.037 0.00 0.00 42.92 3.41
5206 7335 7.699566 AGAGCGTTTAGATCTCTACTTTAGTG 58.300 38.462 0.00 0.00 42.92 2.74
5207 7336 7.868906 AGAGCGTTTAGATCTCTACTTTAGT 57.131 36.000 0.00 0.00 42.92 2.24
5220 7349 9.669353 CCGTAAACTAATATAAGAGCGTTTAGA 57.331 33.333 0.00 0.00 30.36 2.10
5221 7350 9.669353 TCCGTAAACTAATATAAGAGCGTTTAG 57.331 33.333 0.00 0.00 30.36 1.85
5222 7351 9.669353 CTCCGTAAACTAATATAAGAGCGTTTA 57.331 33.333 0.00 0.00 0.00 2.01
5223 7352 7.650903 CCTCCGTAAACTAATATAAGAGCGTTT 59.349 37.037 0.00 0.00 0.00 3.60
5224 7353 7.144000 CCTCCGTAAACTAATATAAGAGCGTT 58.856 38.462 0.00 0.00 0.00 4.84
5225 7354 6.294397 CCCTCCGTAAACTAATATAAGAGCGT 60.294 42.308 0.00 0.00 0.00 5.07
5226 7355 6.072286 TCCCTCCGTAAACTAATATAAGAGCG 60.072 42.308 0.00 0.00 0.00 5.03
5227 7356 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
5228 7357 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
5229 7358 9.289782 GTACTCCCTCCGTAAACTAATATAAGA 57.710 37.037 0.00 0.00 0.00 2.10
5230 7359 8.518702 GGTACTCCCTCCGTAAACTAATATAAG 58.481 40.741 0.00 0.00 0.00 1.73
5231 7360 8.227507 AGGTACTCCCTCCGTAAACTAATATAA 58.772 37.037 0.00 0.00 40.71 0.98
5232 7361 7.759607 AGGTACTCCCTCCGTAAACTAATATA 58.240 38.462 0.00 0.00 40.71 0.86
5233 7362 6.618501 AGGTACTCCCTCCGTAAACTAATAT 58.381 40.000 0.00 0.00 40.71 1.28
5234 7363 6.018433 AGGTACTCCCTCCGTAAACTAATA 57.982 41.667 0.00 0.00 40.71 0.98
5235 7364 4.876580 AGGTACTCCCTCCGTAAACTAAT 58.123 43.478 0.00 0.00 40.71 1.73
5236 7365 4.322057 AGGTACTCCCTCCGTAAACTAA 57.678 45.455 0.00 0.00 40.71 2.24
5237 7366 4.385310 GGTAGGTACTCCCTCCGTAAACTA 60.385 50.000 0.00 0.00 44.81 2.24
5238 7367 2.915657 AGGTACTCCCTCCGTAAACT 57.084 50.000 0.00 0.00 40.71 2.66
5239 7368 2.690497 GGTAGGTACTCCCTCCGTAAAC 59.310 54.545 0.00 0.00 44.81 2.01
5240 7369 2.582636 AGGTAGGTACTCCCTCCGTAAA 59.417 50.000 0.00 0.00 43.09 2.01
5241 7370 2.208872 AGGTAGGTACTCCCTCCGTAA 58.791 52.381 0.00 0.00 43.09 3.18
5242 7371 1.898863 AGGTAGGTACTCCCTCCGTA 58.101 55.000 0.00 0.00 43.09 4.02
5243 7372 1.773653 CTAGGTAGGTACTCCCTCCGT 59.226 57.143 0.00 0.00 43.09 4.69
5244 7373 1.545204 GCTAGGTAGGTACTCCCTCCG 60.545 61.905 0.00 0.00 43.09 4.63
5245 7374 1.782140 AGCTAGGTAGGTACTCCCTCC 59.218 57.143 0.00 0.00 43.09 4.30
5246 7375 2.866351 CAGCTAGGTAGGTACTCCCTC 58.134 57.143 0.00 0.00 43.09 4.30
5248 7377 1.330234 GCAGCTAGGTAGGTACTCCC 58.670 60.000 0.00 0.00 41.75 4.30
5249 7378 0.953003 CGCAGCTAGGTAGGTACTCC 59.047 60.000 0.00 0.00 41.75 3.85
5250 7379 0.953003 CCGCAGCTAGGTAGGTACTC 59.047 60.000 0.00 0.00 41.75 2.59
5251 7380 0.258194 ACCGCAGCTAGGTAGGTACT 59.742 55.000 16.71 0.00 40.80 2.73
5252 7381 0.667453 GACCGCAGCTAGGTAGGTAC 59.333 60.000 17.80 10.18 43.01 3.34
5253 7382 0.256752 TGACCGCAGCTAGGTAGGTA 59.743 55.000 17.80 7.26 43.01 3.08
5254 7383 1.000019 TGACCGCAGCTAGGTAGGT 60.000 57.895 17.82 17.82 43.01 3.08
5255 7384 1.437986 GTGACCGCAGCTAGGTAGG 59.562 63.158 12.45 12.46 43.01 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.