Multiple sequence alignment - TraesCS7D01G225900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G225900 chr7D 100.000 3537 0 0 1 3537 185810407 185813943 0.000000e+00 6532
1 TraesCS7D01G225900 chr7D 95.562 338 15 0 3200 3537 535899492 535899829 3.110000e-150 542
2 TraesCS7D01G225900 chr7D 96.073 331 13 0 3207 3537 99961759 99961429 1.120000e-149 540
3 TraesCS7D01G225900 chr7D 74.776 559 121 15 1882 2427 163593515 163592964 2.120000e-57 233
4 TraesCS7D01G225900 chr7A 91.179 1984 95 31 614 2539 193617171 193619132 0.000000e+00 2621
5 TraesCS7D01G225900 chr7A 88.975 644 55 9 2568 3206 193619209 193619841 0.000000e+00 782
6 TraesCS7D01G225900 chr7A 73.643 1013 212 40 1449 2426 164793291 164792299 1.220000e-89 340
7 TraesCS7D01G225900 chr7A 85.926 135 18 1 236 369 444981316 444981450 3.680000e-30 143
8 TraesCS7D01G225900 chr7B 91.822 1773 113 16 928 2682 328554035 328555793 0.000000e+00 2442
9 TraesCS7D01G225900 chr7B 88.432 389 40 4 2695 3080 328571115 328571501 6.920000e-127 464
10 TraesCS7D01G225900 chr7B 85.973 221 22 5 1 220 328551596 328551808 9.880000e-56 228
11 TraesCS7D01G225900 chrUn 95.822 742 25 2 1807 2542 382006200 382005459 0.000000e+00 1194
12 TraesCS7D01G225900 chrUn 89.286 644 53 9 2568 3206 462250129 462249497 0.000000e+00 793
13 TraesCS7D01G225900 chr3D 96.677 331 11 0 3207 3537 283239080 283239410 5.160000e-153 551
14 TraesCS7D01G225900 chr2D 96.375 331 12 0 3207 3537 534852149 534851819 2.400000e-151 545
15 TraesCS7D01G225900 chr1D 96.375 331 12 0 3207 3537 359693533 359693203 2.400000e-151 545
16 TraesCS7D01G225900 chr1D 96.084 332 13 0 3206 3537 218259059 218258728 3.110000e-150 542
17 TraesCS7D01G225900 chr1D 96.073 331 13 0 3207 3537 7424175 7423845 1.120000e-149 540
18 TraesCS7D01G225900 chr1D 95.522 335 15 0 3203 3537 470058739 470059073 1.440000e-148 536
19 TraesCS7D01G225900 chr5A 96.084 332 13 0 3206 3537 301231574 301231905 3.110000e-150 542
20 TraesCS7D01G225900 chr5B 84.058 138 20 2 217 353 245242912 245243048 7.970000e-27 132


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G225900 chr7D 185810407 185813943 3536 False 6532.0 6532 100.0000 1 3537 1 chr7D.!!$F1 3536
1 TraesCS7D01G225900 chr7D 163592964 163593515 551 True 233.0 233 74.7760 1882 2427 1 chr7D.!!$R2 545
2 TraesCS7D01G225900 chr7A 193617171 193619841 2670 False 1701.5 2621 90.0770 614 3206 2 chr7A.!!$F2 2592
3 TraesCS7D01G225900 chr7A 164792299 164793291 992 True 340.0 340 73.6430 1449 2426 1 chr7A.!!$R1 977
4 TraesCS7D01G225900 chr7B 328551596 328555793 4197 False 1335.0 2442 88.8975 1 2682 2 chr7B.!!$F2 2681
5 TraesCS7D01G225900 chrUn 382005459 382006200 741 True 1194.0 1194 95.8220 1807 2542 1 chrUn.!!$R1 735
6 TraesCS7D01G225900 chrUn 462249497 462250129 632 True 793.0 793 89.2860 2568 3206 1 chrUn.!!$R2 638

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
679 2392 0.030101 GTGCGGCAGCTAAACAACAA 59.97 50.0 10.92 0.0 45.42 2.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2581 4433 0.039256 GGCGCTCATTTGTGAAGCAA 60.039 50.0 7.64 0.0 34.87 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.495155 TGCATGTGAGCAGTGGTAAT 57.505 45.000 0.00 0.00 40.11 1.89
24 25 1.155889 TGTGAGCAGTGGTAATTGCG 58.844 50.000 0.00 0.00 43.43 4.85
27 28 1.270571 TGAGCAGTGGTAATTGCGTGA 60.271 47.619 0.00 0.00 43.43 4.35
52 53 7.620880 ACAATCTGGCTGACAACTATTACTTA 58.379 34.615 0.00 0.00 0.00 2.24
59 60 9.764363 TGGCTGACAACTATTACTTATCTATTG 57.236 33.333 0.00 0.00 0.00 1.90
73 74 3.627395 TCTATTGAAAGTGCGGGTGAT 57.373 42.857 0.00 0.00 0.00 3.06
102 103 1.136110 GTGACTTTGGTTTGGTGGTGG 59.864 52.381 0.00 0.00 0.00 4.61
103 104 1.006043 TGACTTTGGTTTGGTGGTGGA 59.994 47.619 0.00 0.00 0.00 4.02
104 105 1.407618 GACTTTGGTTTGGTGGTGGAC 59.592 52.381 0.00 0.00 0.00 4.02
105 106 1.006639 ACTTTGGTTTGGTGGTGGACT 59.993 47.619 0.00 0.00 0.00 3.85
106 107 1.408702 CTTTGGTTTGGTGGTGGACTG 59.591 52.381 0.00 0.00 0.00 3.51
107 108 0.396417 TTGGTTTGGTGGTGGACTGG 60.396 55.000 0.00 0.00 0.00 4.00
108 109 1.229076 GGTTTGGTGGTGGACTGGT 59.771 57.895 0.00 0.00 0.00 4.00
109 110 1.106944 GGTTTGGTGGTGGACTGGTG 61.107 60.000 0.00 0.00 0.00 4.17
110 111 1.106944 GTTTGGTGGTGGACTGGTGG 61.107 60.000 0.00 0.00 0.00 4.61
111 112 1.576368 TTTGGTGGTGGACTGGTGGT 61.576 55.000 0.00 0.00 0.00 4.16
112 113 1.990160 TTGGTGGTGGACTGGTGGTC 61.990 60.000 0.00 0.00 43.79 4.02
113 114 2.030562 GTGGTGGACTGGTGGTCG 59.969 66.667 0.00 0.00 45.35 4.79
151 152 3.451178 GCATAAGGGAGAGTGTACTTGGA 59.549 47.826 0.00 0.00 0.00 3.53
163 164 4.821805 AGTGTACTTGGAATCAACTTGGTG 59.178 41.667 0.00 0.00 0.00 4.17
164 165 4.578928 GTGTACTTGGAATCAACTTGGTGT 59.421 41.667 0.00 0.00 0.00 4.16
172 173 5.009911 TGGAATCAACTTGGTGTCATCTTTG 59.990 40.000 0.00 0.00 0.00 2.77
239 241 2.375014 AAACAAGACCAACCCGGATT 57.625 45.000 0.73 0.00 38.63 3.01
240 242 3.512219 AAACAAGACCAACCCGGATTA 57.488 42.857 0.73 0.00 38.63 1.75
241 243 2.781681 ACAAGACCAACCCGGATTAG 57.218 50.000 0.73 0.00 38.63 1.73
242 244 2.262637 ACAAGACCAACCCGGATTAGA 58.737 47.619 0.73 0.00 38.63 2.10
243 245 2.027469 ACAAGACCAACCCGGATTAGAC 60.027 50.000 0.73 0.00 38.63 2.59
244 246 2.236395 CAAGACCAACCCGGATTAGACT 59.764 50.000 0.73 0.00 38.63 3.24
245 247 3.393426 AGACCAACCCGGATTAGACTA 57.607 47.619 0.73 0.00 38.63 2.59
246 248 3.297736 AGACCAACCCGGATTAGACTAG 58.702 50.000 0.73 0.00 38.63 2.57
247 249 1.761198 ACCAACCCGGATTAGACTAGC 59.239 52.381 0.73 0.00 38.63 3.42
248 250 2.040178 CCAACCCGGATTAGACTAGCT 58.960 52.381 0.73 0.00 36.56 3.32
249 251 2.434702 CCAACCCGGATTAGACTAGCTT 59.565 50.000 0.73 0.00 36.56 3.74
250 252 3.458189 CAACCCGGATTAGACTAGCTTG 58.542 50.000 0.73 0.00 0.00 4.01
251 253 2.748388 ACCCGGATTAGACTAGCTTGT 58.252 47.619 0.73 0.00 0.00 3.16
252 254 3.105283 ACCCGGATTAGACTAGCTTGTT 58.895 45.455 0.73 0.00 0.00 2.83
253 255 3.118738 ACCCGGATTAGACTAGCTTGTTG 60.119 47.826 0.73 0.00 0.00 3.33
254 256 3.458189 CCGGATTAGACTAGCTTGTTGG 58.542 50.000 0.00 0.00 0.00 3.77
255 257 3.458189 CGGATTAGACTAGCTTGTTGGG 58.542 50.000 1.43 0.00 0.00 4.12
256 258 3.132289 CGGATTAGACTAGCTTGTTGGGA 59.868 47.826 1.43 0.00 0.00 4.37
257 259 4.382685 CGGATTAGACTAGCTTGTTGGGAA 60.383 45.833 1.43 0.00 0.00 3.97
258 260 5.685075 CGGATTAGACTAGCTTGTTGGGAAT 60.685 44.000 1.43 0.67 0.00 3.01
259 261 6.122964 GGATTAGACTAGCTTGTTGGGAATT 58.877 40.000 1.43 0.00 0.00 2.17
260 262 6.603599 GGATTAGACTAGCTTGTTGGGAATTT 59.396 38.462 1.43 0.00 0.00 1.82
261 263 7.122799 GGATTAGACTAGCTTGTTGGGAATTTT 59.877 37.037 1.43 0.00 0.00 1.82
262 264 7.833285 TTAGACTAGCTTGTTGGGAATTTTT 57.167 32.000 1.43 0.00 0.00 1.94
263 265 8.927675 TTAGACTAGCTTGTTGGGAATTTTTA 57.072 30.769 1.43 0.00 0.00 1.52
264 266 9.528489 TTAGACTAGCTTGTTGGGAATTTTTAT 57.472 29.630 1.43 0.00 0.00 1.40
266 268 9.178758 AGACTAGCTTGTTGGGAATTTTTATAG 57.821 33.333 1.43 0.00 0.00 1.31
267 269 9.174166 GACTAGCTTGTTGGGAATTTTTATAGA 57.826 33.333 1.43 0.00 0.00 1.98
268 270 9.528489 ACTAGCTTGTTGGGAATTTTTATAGAA 57.472 29.630 0.00 0.00 0.00 2.10
270 272 8.650143 AGCTTGTTGGGAATTTTTATAGAAGA 57.350 30.769 0.00 0.00 0.00 2.87
271 273 9.088987 AGCTTGTTGGGAATTTTTATAGAAGAA 57.911 29.630 0.00 0.00 0.00 2.52
272 274 9.705290 GCTTGTTGGGAATTTTTATAGAAGAAA 57.295 29.630 0.00 0.00 0.00 2.52
278 280 8.736244 TGGGAATTTTTATAGAAGAAAACTCCG 58.264 33.333 3.83 0.00 40.30 4.63
279 281 8.737175 GGGAATTTTTATAGAAGAAAACTCCGT 58.263 33.333 3.83 0.00 40.30 4.69
280 282 9.556030 GGAATTTTTATAGAAGAAAACTCCGTG 57.444 33.333 0.00 0.00 33.28 4.94
283 285 8.897872 TTTTTATAGAAGAAAACTCCGTGAGT 57.102 30.769 1.23 1.23 45.64 3.41
284 286 9.985730 TTTTTATAGAAGAAAACTCCGTGAGTA 57.014 29.630 6.93 0.00 42.59 2.59
286 288 9.798994 TTTATAGAAGAAAACTCCGTGAGTATC 57.201 33.333 6.93 8.55 42.59 2.24
300 302 3.954200 TGAGTATCAAATGCTCAAGCCA 58.046 40.909 5.42 0.00 45.97 4.75
301 303 4.334552 TGAGTATCAAATGCTCAAGCCAA 58.665 39.130 5.42 0.00 45.97 4.52
302 304 4.397103 TGAGTATCAAATGCTCAAGCCAAG 59.603 41.667 5.42 0.00 45.97 3.61
303 305 4.592942 AGTATCAAATGCTCAAGCCAAGA 58.407 39.130 0.00 0.00 41.18 3.02
304 306 3.863142 ATCAAATGCTCAAGCCAAGAC 57.137 42.857 0.00 0.00 41.18 3.01
305 307 2.867624 TCAAATGCTCAAGCCAAGACT 58.132 42.857 0.00 0.00 41.18 3.24
306 308 3.225104 TCAAATGCTCAAGCCAAGACTT 58.775 40.909 0.00 0.00 41.18 3.01
307 309 3.005050 TCAAATGCTCAAGCCAAGACTTG 59.995 43.478 8.31 8.31 46.86 3.16
313 315 3.800826 AAGCCAAGACTTGAACCGT 57.199 47.368 16.99 0.60 0.00 4.83
314 316 1.308998 AAGCCAAGACTTGAACCGTG 58.691 50.000 16.99 0.00 0.00 4.94
315 317 0.535102 AGCCAAGACTTGAACCGTGG 60.535 55.000 16.99 0.00 35.48 4.94
316 318 0.818040 GCCAAGACTTGAACCGTGGT 60.818 55.000 16.99 0.00 34.97 4.16
317 319 0.944386 CCAAGACTTGAACCGTGGTG 59.056 55.000 16.99 0.00 0.00 4.17
318 320 0.944386 CAAGACTTGAACCGTGGTGG 59.056 55.000 9.76 0.00 46.41 4.61
319 321 0.179029 AAGACTTGAACCGTGGTGGG 60.179 55.000 0.00 0.00 44.64 4.61
320 322 2.203294 ACTTGAACCGTGGTGGGC 60.203 61.111 0.00 0.00 44.64 5.36
321 323 2.113139 CTTGAACCGTGGTGGGCT 59.887 61.111 0.00 0.00 44.64 5.19
322 324 2.203280 TTGAACCGTGGTGGGCTG 60.203 61.111 0.00 0.00 44.64 4.85
323 325 3.783362 TTGAACCGTGGTGGGCTGG 62.783 63.158 0.00 0.00 44.64 4.85
333 335 4.704833 TGGGCTGGCTGCGAACTC 62.705 66.667 10.35 0.00 44.05 3.01
337 339 4.379243 CTGGCTGCGAACTCCCGT 62.379 66.667 0.00 0.00 0.00 5.28
338 340 4.680237 TGGCTGCGAACTCCCGTG 62.680 66.667 0.00 0.00 0.00 4.94
339 341 4.681978 GGCTGCGAACTCCCGTGT 62.682 66.667 0.00 0.00 0.00 4.49
340 342 3.112709 GCTGCGAACTCCCGTGTC 61.113 66.667 0.00 0.00 0.00 3.67
341 343 2.651361 CTGCGAACTCCCGTGTCT 59.349 61.111 0.00 0.00 0.00 3.41
342 344 1.006102 CTGCGAACTCCCGTGTCTT 60.006 57.895 0.00 0.00 0.00 3.01
343 345 1.284982 CTGCGAACTCCCGTGTCTTG 61.285 60.000 0.00 0.00 0.00 3.02
344 346 2.668280 GCGAACTCCCGTGTCTTGC 61.668 63.158 0.00 0.00 0.00 4.01
345 347 2.027625 CGAACTCCCGTGTCTTGCC 61.028 63.158 0.00 0.00 0.00 4.52
346 348 1.070786 GAACTCCCGTGTCTTGCCA 59.929 57.895 0.00 0.00 0.00 4.92
347 349 0.534203 GAACTCCCGTGTCTTGCCAA 60.534 55.000 0.00 0.00 0.00 4.52
348 350 0.818040 AACTCCCGTGTCTTGCCAAC 60.818 55.000 0.00 0.00 0.00 3.77
349 351 1.071471 CTCCCGTGTCTTGCCAACT 59.929 57.895 0.00 0.00 0.00 3.16
350 352 1.227823 TCCCGTGTCTTGCCAACTG 60.228 57.895 0.00 0.00 0.00 3.16
351 353 1.227823 CCCGTGTCTTGCCAACTGA 60.228 57.895 0.00 0.00 0.00 3.41
352 354 1.230635 CCCGTGTCTTGCCAACTGAG 61.231 60.000 0.00 0.00 0.00 3.35
353 355 1.571460 CGTGTCTTGCCAACTGAGC 59.429 57.895 0.00 0.00 0.00 4.26
354 356 0.882042 CGTGTCTTGCCAACTGAGCT 60.882 55.000 0.00 0.00 0.00 4.09
355 357 1.605457 CGTGTCTTGCCAACTGAGCTA 60.605 52.381 0.00 0.00 0.00 3.32
356 358 1.801178 GTGTCTTGCCAACTGAGCTAC 59.199 52.381 0.00 0.00 0.00 3.58
357 359 1.270839 TGTCTTGCCAACTGAGCTACC 60.271 52.381 0.00 0.00 0.00 3.18
358 360 0.324943 TCTTGCCAACTGAGCTACCC 59.675 55.000 0.00 0.00 0.00 3.69
359 361 0.326264 CTTGCCAACTGAGCTACCCT 59.674 55.000 0.00 0.00 0.00 4.34
360 362 0.324943 TTGCCAACTGAGCTACCCTC 59.675 55.000 0.00 0.00 41.15 4.30
368 370 2.604912 TGAGCTACCCTCAGTTCTCA 57.395 50.000 0.00 0.00 45.44 3.27
369 371 2.171840 TGAGCTACCCTCAGTTCTCAC 58.828 52.381 0.00 0.00 45.44 3.51
370 372 2.225142 TGAGCTACCCTCAGTTCTCACT 60.225 50.000 0.00 0.00 45.44 3.41
371 373 2.829120 GAGCTACCCTCAGTTCTCACTT 59.171 50.000 0.00 0.00 40.45 3.16
372 374 3.243724 AGCTACCCTCAGTTCTCACTTT 58.756 45.455 0.00 0.00 0.00 2.66
373 375 3.259625 AGCTACCCTCAGTTCTCACTTTC 59.740 47.826 0.00 0.00 0.00 2.62
374 376 3.006967 GCTACCCTCAGTTCTCACTTTCA 59.993 47.826 0.00 0.00 0.00 2.69
375 377 4.323104 GCTACCCTCAGTTCTCACTTTCAT 60.323 45.833 0.00 0.00 0.00 2.57
376 378 4.713792 ACCCTCAGTTCTCACTTTCATT 57.286 40.909 0.00 0.00 0.00 2.57
377 379 5.825593 ACCCTCAGTTCTCACTTTCATTA 57.174 39.130 0.00 0.00 0.00 1.90
378 380 6.187727 ACCCTCAGTTCTCACTTTCATTAA 57.812 37.500 0.00 0.00 0.00 1.40
379 381 6.234177 ACCCTCAGTTCTCACTTTCATTAAG 58.766 40.000 0.00 0.00 39.87 1.85
381 383 7.016268 ACCCTCAGTTCTCACTTTCATTAAGTA 59.984 37.037 0.00 0.00 45.29 2.24
382 384 7.878127 CCCTCAGTTCTCACTTTCATTAAGTAA 59.122 37.037 0.00 0.00 45.29 2.24
383 385 9.442047 CCTCAGTTCTCACTTTCATTAAGTAAT 57.558 33.333 0.00 0.00 45.29 1.89
405 407 1.337118 AAAAATGGCGTGGGATGTGT 58.663 45.000 0.00 0.00 0.00 3.72
414 416 1.801395 CGTGGGATGTGTATCACGGAC 60.801 57.143 6.79 0.00 46.05 4.79
415 417 1.480954 GTGGGATGTGTATCACGGACT 59.519 52.381 0.00 0.00 39.70 3.85
418 420 2.093658 GGGATGTGTATCACGGACTGTT 60.094 50.000 0.00 0.00 37.14 3.16
430 432 1.596954 CGGACTGTTTGTTGAAAGCCG 60.597 52.381 0.00 0.00 0.00 5.52
431 433 1.477105 GACTGTTTGTTGAAAGCCGC 58.523 50.000 0.00 0.00 0.00 6.53
433 435 0.934436 CTGTTTGTTGAAAGCCGCCG 60.934 55.000 0.00 0.00 0.00 6.46
434 436 1.660264 GTTTGTTGAAAGCCGCCGG 60.660 57.895 0.00 0.00 0.00 6.13
435 437 2.122167 TTTGTTGAAAGCCGCCGGT 61.122 52.632 4.45 0.00 0.00 5.28
436 438 2.065906 TTTGTTGAAAGCCGCCGGTC 62.066 55.000 4.45 0.00 0.00 4.79
440 442 1.175983 TTGAAAGCCGCCGGTCAAAT 61.176 50.000 4.45 0.00 0.00 2.32
442 444 1.021968 GAAAGCCGCCGGTCAAATAT 58.978 50.000 4.45 0.00 0.00 1.28
468 2174 6.356190 GTCACTAAACACTAACAAACAATCGC 59.644 38.462 0.00 0.00 0.00 4.58
470 2176 3.636282 AACACTAACAAACAATCGCCC 57.364 42.857 0.00 0.00 0.00 6.13
485 2191 0.673644 CGCCCGAGAGAACCATTTGT 60.674 55.000 0.00 0.00 0.00 2.83
498 2204 9.739276 AGAGAACCATTTGTGATTATCTTTGTA 57.261 29.630 0.00 0.00 0.00 2.41
522 2228 3.963428 AACTAGGCTGATGAAACGTCT 57.037 42.857 0.00 0.00 0.00 4.18
534 2240 2.364324 TGAAACGTCTGAGCTAACCTGT 59.636 45.455 0.00 0.00 0.00 4.00
556 2262 3.006537 TCTTAGGTGTGTGGAGCTGTTAC 59.993 47.826 0.00 0.00 0.00 2.50
563 2269 3.323691 TGTGTGGAGCTGTTACTGTACAT 59.676 43.478 0.00 0.00 0.00 2.29
564 2270 3.679980 GTGTGGAGCTGTTACTGTACATG 59.320 47.826 0.00 0.00 0.00 3.21
565 2271 3.576550 TGTGGAGCTGTTACTGTACATGA 59.423 43.478 0.00 0.00 0.00 3.07
566 2272 4.039852 TGTGGAGCTGTTACTGTACATGAA 59.960 41.667 0.00 0.00 0.00 2.57
567 2273 4.994852 GTGGAGCTGTTACTGTACATGAAA 59.005 41.667 0.00 0.00 0.00 2.69
568 2274 5.468746 GTGGAGCTGTTACTGTACATGAAAA 59.531 40.000 0.00 0.00 0.00 2.29
569 2275 6.149474 GTGGAGCTGTTACTGTACATGAAAAT 59.851 38.462 0.00 0.00 0.00 1.82
570 2276 6.149308 TGGAGCTGTTACTGTACATGAAAATG 59.851 38.462 0.00 0.00 0.00 2.32
571 2277 5.942872 AGCTGTTACTGTACATGAAAATGC 58.057 37.500 0.00 0.00 0.00 3.56
572 2278 5.473162 AGCTGTTACTGTACATGAAAATGCA 59.527 36.000 0.00 0.00 0.00 3.96
573 2279 5.569059 GCTGTTACTGTACATGAAAATGCAC 59.431 40.000 0.00 0.00 0.00 4.57
574 2280 6.007936 TGTTACTGTACATGAAAATGCACC 57.992 37.500 0.00 0.00 0.00 5.01
575 2281 5.048364 TGTTACTGTACATGAAAATGCACCC 60.048 40.000 0.00 0.00 0.00 4.61
576 2282 2.487762 ACTGTACATGAAAATGCACCCG 59.512 45.455 0.00 0.00 0.00 5.28
577 2283 1.201181 TGTACATGAAAATGCACCCGC 59.799 47.619 0.00 0.00 39.24 6.13
606 2312 8.891671 AAAAAGAGTGTACATGAAAATGCATT 57.108 26.923 5.99 5.99 0.00 3.56
607 2313 8.891671 AAAAGAGTGTACATGAAAATGCATTT 57.108 26.923 18.99 18.99 0.00 2.32
608 2314 8.891671 AAAGAGTGTACATGAAAATGCATTTT 57.108 26.923 32.11 32.11 42.24 1.82
609 2315 8.891671 AAGAGTGTACATGAAAATGCATTTTT 57.108 26.923 32.09 21.14 39.86 1.94
660 2373 2.061773 CACAGACGTTGGCAGTCTTAG 58.938 52.381 6.66 0.69 45.74 2.18
665 2378 1.626654 CGTTGGCAGTCTTAGTGCGG 61.627 60.000 0.93 0.00 45.23 5.69
677 2390 1.153353 TAGTGCGGCAGCTAAACAAC 58.847 50.000 10.92 0.00 45.42 3.32
678 2391 0.817634 AGTGCGGCAGCTAAACAACA 60.818 50.000 10.92 0.00 45.42 3.33
679 2392 0.030101 GTGCGGCAGCTAAACAACAA 59.970 50.000 10.92 0.00 45.42 2.83
680 2393 0.030101 TGCGGCAGCTAAACAACAAC 59.970 50.000 10.92 0.00 45.42 3.32
681 2394 0.310854 GCGGCAGCTAAACAACAACT 59.689 50.000 0.00 0.00 41.01 3.16
682 2395 1.533731 GCGGCAGCTAAACAACAACTA 59.466 47.619 0.00 0.00 41.01 2.24
683 2396 2.031508 GCGGCAGCTAAACAACAACTAA 60.032 45.455 0.00 0.00 41.01 2.24
711 2429 0.609957 CAGCTGGAACTCCATGGCAA 60.610 55.000 6.96 0.00 46.46 4.52
720 2438 0.745486 CTCCATGGCAATCGCTCACA 60.745 55.000 6.96 0.00 38.60 3.58
739 2457 0.179029 AGGCGTACAAACCTTGTGCT 60.179 50.000 2.30 0.00 45.03 4.40
755 2473 0.680618 TGCTGAAACCTTTGGGCATG 59.319 50.000 0.00 0.00 35.63 4.06
759 2477 0.243636 GAAACCTTTGGGCATGACGG 59.756 55.000 0.00 0.00 35.63 4.79
764 2485 1.683943 CTTTGGGCATGACGGATGAT 58.316 50.000 0.00 0.00 33.31 2.45
777 2498 9.371136 GCATGACGGATGATAATATAAGAAAGA 57.629 33.333 0.00 0.00 33.31 2.52
812 2533 2.328099 GCACAAGGCTGGACTTCCG 61.328 63.158 0.00 0.00 40.25 4.30
889 2621 2.037381 TGCCACATCAACCAGTACGTAA 59.963 45.455 0.00 0.00 0.00 3.18
901 2633 6.934561 ACCAGTACGTAAGATTTTCGTAAC 57.065 37.500 0.00 0.00 40.71 2.50
904 2636 6.583806 CCAGTACGTAAGATTTTCGTAACACT 59.416 38.462 0.00 0.00 40.71 3.55
910 2642 7.169645 ACGTAAGATTTTCGTAACACTAAGCAA 59.830 33.333 0.00 0.00 43.62 3.91
912 2644 9.474249 GTAAGATTTTCGTAACACTAAGCAATC 57.526 33.333 0.00 0.00 0.00 2.67
917 2649 4.659088 TCGTAACACTAAGCAATCTCGAG 58.341 43.478 5.93 5.93 0.00 4.04
922 2654 6.619801 AACACTAAGCAATCTCGAGTTTTT 57.380 33.333 13.13 5.47 0.00 1.94
923 2655 7.724305 AACACTAAGCAATCTCGAGTTTTTA 57.276 32.000 13.13 6.31 0.00 1.52
924 2656 7.907214 ACACTAAGCAATCTCGAGTTTTTAT 57.093 32.000 13.13 0.00 0.00 1.40
925 2657 8.997621 ACACTAAGCAATCTCGAGTTTTTATA 57.002 30.769 13.13 2.59 0.00 0.98
926 2658 9.601217 ACACTAAGCAATCTCGAGTTTTTATAT 57.399 29.630 13.13 0.00 0.00 0.86
950 2706 4.136796 AGAGCACAACAAGAACAATGCTA 58.863 39.130 0.00 0.00 43.20 3.49
958 2714 3.009033 ACAAGAACAATGCTACAGGCCTA 59.991 43.478 3.98 0.00 40.92 3.93
991 2756 2.923655 CAAGCTTCTGCGATCGAGTTAA 59.076 45.455 21.57 5.90 45.42 2.01
994 2759 1.846782 CTTCTGCGATCGAGTTAACCG 59.153 52.381 21.57 6.09 0.00 4.44
1076 2845 0.674895 GGCAGCTCTTACCACACCAG 60.675 60.000 0.00 0.00 0.00 4.00
1081 2850 0.035317 CTCTTACCACACCAGCAGCA 59.965 55.000 0.00 0.00 0.00 4.41
1090 2859 2.113774 CCAGCAGCAACTCCCACA 59.886 61.111 0.00 0.00 0.00 4.17
1128 2897 0.179121 TCCGTTCATCCCACGATTCG 60.179 55.000 4.14 4.14 40.20 3.34
1171 2940 1.636988 CGTCCATTCCGGTGAAGTAC 58.363 55.000 0.00 0.00 33.05 2.73
1173 2942 2.734492 CGTCCATTCCGGTGAAGTACTC 60.734 54.545 0.00 0.00 33.05 2.59
1265 3045 1.379977 TCGTCATTCTCCCCGCTCT 60.380 57.895 0.00 0.00 0.00 4.09
1336 3116 2.896801 GCTGCCCGTAATGCATCGG 61.897 63.158 17.61 17.61 45.42 4.18
1603 3383 2.281970 CTGCTCCAGTGCAAGCCA 60.282 61.111 5.68 0.00 42.83 4.75
1876 3674 4.899239 GGCTCGTCCGGCATCCTG 62.899 72.222 0.00 0.00 0.00 3.86
1963 3761 1.734137 CTACTGCCTGCCGTCGTAT 59.266 57.895 0.00 0.00 0.00 3.06
2104 3902 2.582436 GGTTTCTCCATCGCCGGA 59.418 61.111 5.05 0.00 35.97 5.14
2120 3918 0.753262 CGGACGGGATTCCAAGATCT 59.247 55.000 4.80 0.00 35.04 2.75
2458 4262 2.047655 GTGGTTGCGGTGATCGGA 60.048 61.111 0.00 0.00 39.69 4.55
2462 4266 2.046700 TTGCGGTGATCGGAACCC 60.047 61.111 0.00 0.00 44.02 4.11
2470 4274 3.969250 GATCGGAACCCTGGCGCAA 62.969 63.158 10.83 0.00 0.00 4.85
2516 4320 1.377333 CTCGGAGGAAAGGTTGGGC 60.377 63.158 0.00 0.00 0.00 5.36
2581 4433 2.426522 TGCATAGCTTCTCGTTTTGCT 58.573 42.857 0.00 0.00 39.30 3.91
2646 4498 8.512956 GTCATATAGTCGTATGTAACTGTGGAT 58.487 37.037 0.00 0.00 34.44 3.41
2684 4536 7.310609 CCTTCCCAGGAATGAATAAACAACATT 60.311 37.037 0.00 0.00 44.19 2.71
2685 4537 6.934056 TCCCAGGAATGAATAAACAACATTG 58.066 36.000 0.00 0.00 34.94 2.82
2686 4538 6.070881 TCCCAGGAATGAATAAACAACATTGG 60.071 38.462 0.00 0.00 34.94 3.16
2687 4539 6.070881 CCCAGGAATGAATAAACAACATTGGA 60.071 38.462 0.00 0.00 34.94 3.53
2688 4540 7.037438 CCAGGAATGAATAAACAACATTGGAG 58.963 38.462 0.00 0.00 34.94 3.86
2689 4541 7.309990 CCAGGAATGAATAAACAACATTGGAGT 60.310 37.037 0.00 0.00 34.94 3.85
2718 4572 7.102847 TCTTTTAACCCACGATGTTCTTTTT 57.897 32.000 0.00 0.00 0.00 1.94
2719 4573 8.223177 TCTTTTAACCCACGATGTTCTTTTTA 57.777 30.769 0.00 0.00 0.00 1.52
2721 4575 9.471084 CTTTTAACCCACGATGTTCTTTTTATT 57.529 29.630 0.00 0.00 0.00 1.40
2722 4576 9.819267 TTTTAACCCACGATGTTCTTTTTATTT 57.181 25.926 0.00 0.00 0.00 1.40
2768 4623 8.592105 TCCTTATGTGCTTGATTTTCTTTTTG 57.408 30.769 0.00 0.00 0.00 2.44
2769 4624 7.656948 TCCTTATGTGCTTGATTTTCTTTTTGG 59.343 33.333 0.00 0.00 0.00 3.28
2778 4633 6.709145 TGATTTTCTTTTTGGCATCAATCG 57.291 33.333 0.00 0.00 32.28 3.34
2783 4638 5.902613 TCTTTTTGGCATCAATCGATTCT 57.097 34.783 7.92 0.00 32.28 2.40
2784 4639 7.389803 TTCTTTTTGGCATCAATCGATTCTA 57.610 32.000 7.92 0.00 32.28 2.10
2827 4682 0.249868 TGACAAGTGGCGGTGAAGAG 60.250 55.000 0.00 0.00 0.00 2.85
2828 4683 1.569479 GACAAGTGGCGGTGAAGAGC 61.569 60.000 0.00 0.00 0.00 4.09
2829 4684 2.357517 AAGTGGCGGTGAAGAGCG 60.358 61.111 0.00 0.00 46.03 5.03
2830 4685 3.165160 AAGTGGCGGTGAAGAGCGT 62.165 57.895 0.00 0.00 45.04 5.07
2837 4692 1.153997 GGTGAAGAGCGTCGACCTC 60.154 63.158 20.13 20.13 0.00 3.85
2862 4717 1.229984 ACTAAGCCAGGGCCTCCTT 60.230 57.895 17.33 17.33 42.67 3.36
2864 4719 0.761802 CTAAGCCAGGGCCTCCTTAG 59.238 60.000 24.81 24.81 42.67 2.18
2930 4785 4.894114 CGATAAAGGAGAGGAAGAGGGTTA 59.106 45.833 0.00 0.00 0.00 2.85
3010 4865 4.446371 GAGAAGAACATGAGGTGTATGGG 58.554 47.826 0.00 0.00 41.14 4.00
3015 4870 2.184533 ACATGAGGTGTATGGGTTCGA 58.815 47.619 0.00 0.00 39.91 3.71
3030 4885 3.548770 GGTTCGAAAAGGGGGTTATAGG 58.451 50.000 0.00 0.00 0.00 2.57
3035 4890 3.497942 CGAAAAGGGGGTTATAGGGATGG 60.498 52.174 0.00 0.00 0.00 3.51
3042 4897 1.351350 GGTTATAGGGATGGTCAGGGC 59.649 57.143 0.00 0.00 0.00 5.19
3085 4940 2.204213 AGAGGCAAGGGGAAGGCT 60.204 61.111 0.00 0.00 43.98 4.58
3091 4946 1.001641 CAAGGGGAAGGCTGGACAG 60.002 63.158 0.00 0.00 0.00 3.51
3105 4960 2.828868 ACAGCAAGGCGGTCAGAA 59.171 55.556 0.00 0.00 29.95 3.02
3106 4961 1.148273 ACAGCAAGGCGGTCAGAAA 59.852 52.632 0.00 0.00 29.95 2.52
3109 4964 2.982744 GCAAGGCGGTCAGAAAGGC 61.983 63.158 0.00 0.00 0.00 4.35
3110 4965 2.358737 AAGGCGGTCAGAAAGGCG 60.359 61.111 0.00 0.00 35.47 5.52
3154 5009 0.892755 CAACAGATGGTGGCTTGCAT 59.107 50.000 0.00 0.00 0.00 3.96
3169 5024 4.396522 GCTTGCATGAGGGAAGAAGATAT 58.603 43.478 1.72 0.00 46.95 1.63
3191 5046 0.948623 ATCGCTGTAGCAACACGCAA 60.949 50.000 4.59 0.00 46.13 4.85
3194 5049 1.941072 CTGTAGCAACACGCAAGCA 59.059 52.632 0.00 0.00 46.13 3.91
3200 5055 1.503542 CAACACGCAAGCATCCCTC 59.496 57.895 0.00 0.00 45.62 4.30
3206 5061 1.078848 GCAAGCATCCCTCACGACT 60.079 57.895 0.00 0.00 0.00 4.18
3207 5062 0.175760 GCAAGCATCCCTCACGACTA 59.824 55.000 0.00 0.00 0.00 2.59
3208 5063 1.804372 GCAAGCATCCCTCACGACTAG 60.804 57.143 0.00 0.00 0.00 2.57
3209 5064 1.478510 CAAGCATCCCTCACGACTAGT 59.521 52.381 0.00 0.00 0.00 2.57
3210 5065 2.688446 CAAGCATCCCTCACGACTAGTA 59.312 50.000 0.00 0.00 0.00 1.82
3211 5066 2.299521 AGCATCCCTCACGACTAGTAC 58.700 52.381 0.00 0.00 0.00 2.73
3212 5067 2.092321 AGCATCCCTCACGACTAGTACT 60.092 50.000 0.00 0.00 0.00 2.73
3213 5068 2.033550 GCATCCCTCACGACTAGTACTG 59.966 54.545 5.39 0.00 0.00 2.74
3214 5069 2.414994 TCCCTCACGACTAGTACTGG 57.585 55.000 5.39 4.89 0.00 4.00
3215 5070 0.739561 CCCTCACGACTAGTACTGGC 59.260 60.000 5.39 0.00 0.00 4.85
3216 5071 0.739561 CCTCACGACTAGTACTGGCC 59.260 60.000 5.39 0.00 0.00 5.36
3217 5072 1.460504 CTCACGACTAGTACTGGCCA 58.539 55.000 4.71 4.71 0.00 5.36
3218 5073 2.025155 CTCACGACTAGTACTGGCCAT 58.975 52.381 5.51 0.00 0.00 4.40
3219 5074 2.022195 TCACGACTAGTACTGGCCATC 58.978 52.381 5.51 0.00 0.00 3.51
3220 5075 2.025155 CACGACTAGTACTGGCCATCT 58.975 52.381 5.51 8.22 0.00 2.90
3221 5076 2.033550 CACGACTAGTACTGGCCATCTC 59.966 54.545 5.51 0.00 0.00 2.75
3222 5077 2.298610 CGACTAGTACTGGCCATCTCA 58.701 52.381 5.51 0.00 0.00 3.27
3223 5078 2.292016 CGACTAGTACTGGCCATCTCAG 59.708 54.545 5.51 2.71 38.16 3.35
3224 5079 2.625790 GACTAGTACTGGCCATCTCAGG 59.374 54.545 5.51 0.00 36.62 3.86
3264 5119 2.601299 GGCCCGGCCCTAAAATCT 59.399 61.111 18.83 0.00 44.06 2.40
3265 5120 1.841302 GGCCCGGCCCTAAAATCTA 59.159 57.895 18.83 0.00 44.06 1.98
3266 5121 0.250770 GGCCCGGCCCTAAAATCTAG 60.251 60.000 18.83 0.00 44.06 2.43
3267 5122 0.250770 GCCCGGCCCTAAAATCTAGG 60.251 60.000 0.00 0.00 34.52 3.02
3275 5130 2.306219 CCCTAAAATCTAGGGCCTAGGC 59.694 54.545 34.38 26.55 46.81 3.93
3318 5173 2.732289 GCTTGGGCCTGAGTTTTGA 58.268 52.632 4.53 0.00 0.00 2.69
3319 5174 0.600057 GCTTGGGCCTGAGTTTTGAG 59.400 55.000 4.53 0.00 0.00 3.02
3320 5175 0.600057 CTTGGGCCTGAGTTTTGAGC 59.400 55.000 4.53 0.00 0.00 4.26
3321 5176 0.827507 TTGGGCCTGAGTTTTGAGCC 60.828 55.000 4.53 0.00 43.09 4.70
3322 5177 3.686760 GGCCTGAGTTTTGAGCCC 58.313 61.111 0.00 0.00 37.66 5.19
3323 5178 1.228552 GGCCTGAGTTTTGAGCCCA 60.229 57.895 0.00 0.00 37.66 5.36
3324 5179 1.527433 GGCCTGAGTTTTGAGCCCAC 61.527 60.000 0.00 0.00 37.66 4.61
3325 5180 1.527433 GCCTGAGTTTTGAGCCCACC 61.527 60.000 0.00 0.00 0.00 4.61
3326 5181 0.178992 CCTGAGTTTTGAGCCCACCA 60.179 55.000 0.00 0.00 0.00 4.17
3327 5182 1.242076 CTGAGTTTTGAGCCCACCAG 58.758 55.000 0.00 0.00 0.00 4.00
3328 5183 0.823356 TGAGTTTTGAGCCCACCAGC 60.823 55.000 0.00 0.00 0.00 4.85
3329 5184 0.823356 GAGTTTTGAGCCCACCAGCA 60.823 55.000 0.00 0.00 34.23 4.41
3330 5185 0.396974 AGTTTTGAGCCCACCAGCAA 60.397 50.000 0.00 0.00 34.23 3.91
3331 5186 0.032540 GTTTTGAGCCCACCAGCAAG 59.967 55.000 0.00 0.00 34.23 4.01
3332 5187 1.747325 TTTTGAGCCCACCAGCAAGC 61.747 55.000 0.00 0.00 34.23 4.01
3333 5188 4.666253 TGAGCCCACCAGCAAGCC 62.666 66.667 0.00 0.00 34.23 4.35
3351 5206 4.351054 CTGGACGGGCTTGGGCTT 62.351 66.667 0.00 0.00 38.73 4.35
3352 5207 4.659172 TGGACGGGCTTGGGCTTG 62.659 66.667 0.00 0.00 38.73 4.01
3357 5212 2.043046 GGGCTTGGGCTTGGCATA 60.043 61.111 0.00 0.00 38.73 3.14
3358 5213 1.458209 GGGCTTGGGCTTGGCATAT 60.458 57.895 0.00 0.00 38.73 1.78
3359 5214 1.050421 GGGCTTGGGCTTGGCATATT 61.050 55.000 0.00 0.00 38.73 1.28
3360 5215 0.105408 GGCTTGGGCTTGGCATATTG 59.895 55.000 0.00 0.00 38.73 1.90
3361 5216 0.105408 GCTTGGGCTTGGCATATTGG 59.895 55.000 0.00 0.00 35.22 3.16
3362 5217 0.105408 CTTGGGCTTGGCATATTGGC 59.895 55.000 0.00 0.00 44.03 4.52
3375 5230 6.160576 GGCATATTGGCATTTTAAGGAAGA 57.839 37.500 0.00 0.00 43.14 2.87
3376 5231 6.218746 GGCATATTGGCATTTTAAGGAAGAG 58.781 40.000 0.00 0.00 43.14 2.85
3377 5232 6.218746 GCATATTGGCATTTTAAGGAAGAGG 58.781 40.000 0.00 0.00 0.00 3.69
3378 5233 4.743057 ATTGGCATTTTAAGGAAGAGGC 57.257 40.909 0.00 0.00 0.00 4.70
3379 5234 2.456577 TGGCATTTTAAGGAAGAGGCC 58.543 47.619 0.00 0.00 40.51 5.19
3380 5235 2.042979 TGGCATTTTAAGGAAGAGGCCT 59.957 45.455 3.86 3.86 40.72 5.19
3381 5236 2.428530 GGCATTTTAAGGAAGAGGCCTG 59.571 50.000 12.00 0.00 38.58 4.85
3382 5237 2.428530 GCATTTTAAGGAAGAGGCCTGG 59.571 50.000 12.00 0.00 38.58 4.45
3383 5238 2.215942 TTTTAAGGAAGAGGCCTGGC 57.784 50.000 12.00 11.05 38.58 4.85
3415 5270 3.596362 CCCTAAGGGCTTTTCAGGG 57.404 57.895 3.08 3.08 40.10 4.45
3416 5271 0.684479 CCCTAAGGGCTTTTCAGGGC 60.684 60.000 4.44 0.00 39.62 5.19
3417 5272 0.332972 CCTAAGGGCTTTTCAGGGCT 59.667 55.000 0.00 0.00 0.00 5.19
3418 5273 1.272704 CCTAAGGGCTTTTCAGGGCTT 60.273 52.381 0.00 0.00 0.00 4.35
3419 5274 2.529632 CTAAGGGCTTTTCAGGGCTTT 58.470 47.619 0.00 0.00 33.62 3.51
3420 5275 1.806496 AAGGGCTTTTCAGGGCTTTT 58.194 45.000 0.00 0.00 0.00 2.27
3421 5276 1.806496 AGGGCTTTTCAGGGCTTTTT 58.194 45.000 0.00 0.00 0.00 1.94
3422 5277 2.970987 AGGGCTTTTCAGGGCTTTTTA 58.029 42.857 0.00 0.00 0.00 1.52
3423 5278 2.632996 AGGGCTTTTCAGGGCTTTTTAC 59.367 45.455 0.00 0.00 0.00 2.01
3424 5279 2.289444 GGGCTTTTCAGGGCTTTTTACC 60.289 50.000 0.00 0.00 0.00 2.85
3425 5280 2.367241 GGCTTTTCAGGGCTTTTTACCA 59.633 45.455 0.00 0.00 0.00 3.25
3426 5281 3.554960 GGCTTTTCAGGGCTTTTTACCAG 60.555 47.826 0.00 0.00 0.00 4.00
3427 5282 3.320826 GCTTTTCAGGGCTTTTTACCAGA 59.679 43.478 0.00 0.00 0.00 3.86
3428 5283 4.021104 GCTTTTCAGGGCTTTTTACCAGAT 60.021 41.667 0.00 0.00 0.00 2.90
3429 5284 5.467035 TTTTCAGGGCTTTTTACCAGATG 57.533 39.130 0.00 0.00 0.00 2.90
3430 5285 3.085952 TCAGGGCTTTTTACCAGATGG 57.914 47.619 0.00 0.00 42.17 3.51
3431 5286 2.102578 CAGGGCTTTTTACCAGATGGG 58.897 52.381 3.48 0.00 44.81 4.00
3432 5287 0.824109 GGGCTTTTTACCAGATGGGC 59.176 55.000 3.48 0.00 42.05 5.36
3433 5288 0.824109 GGCTTTTTACCAGATGGGCC 59.176 55.000 3.48 0.00 42.05 5.80
3434 5289 0.455815 GCTTTTTACCAGATGGGCCG 59.544 55.000 3.48 0.00 42.05 6.13
3435 5290 1.102978 CTTTTTACCAGATGGGCCGG 58.897 55.000 0.00 0.00 42.05 6.13
3436 5291 0.323908 TTTTTACCAGATGGGCCGGG 60.324 55.000 2.18 0.00 42.05 5.73
3437 5292 2.847366 TTTTACCAGATGGGCCGGGC 62.847 60.000 22.00 22.00 42.05 6.13
3438 5293 4.815973 TACCAGATGGGCCGGGCT 62.816 66.667 28.80 9.11 42.05 5.19
3447 5302 4.344865 GGCCGGGCTTGGACTTGA 62.345 66.667 22.87 0.00 32.64 3.02
3448 5303 2.282180 GCCGGGCTTGGACTTGAA 60.282 61.111 12.87 0.00 0.00 2.69
3449 5304 1.901464 GCCGGGCTTGGACTTGAAA 60.901 57.895 12.87 0.00 0.00 2.69
3450 5305 1.460273 GCCGGGCTTGGACTTGAAAA 61.460 55.000 12.87 0.00 0.00 2.29
3463 5318 2.017049 CTTGAAAAGTAGGCCCGATGG 58.983 52.381 0.00 0.00 39.70 3.51
3464 5319 0.988832 TGAAAAGTAGGCCCGATGGT 59.011 50.000 0.00 0.00 0.00 3.55
3465 5320 2.189676 TGAAAAGTAGGCCCGATGGTA 58.810 47.619 0.00 0.00 0.00 3.25
3466 5321 2.169769 TGAAAAGTAGGCCCGATGGTAG 59.830 50.000 0.00 0.00 0.00 3.18
3467 5322 1.129058 AAAGTAGGCCCGATGGTAGG 58.871 55.000 0.00 0.00 0.00 3.18
3473 5328 3.560251 CCCGATGGTAGGGCCTGG 61.560 72.222 18.53 7.41 42.77 4.45
3474 5329 3.560251 CCGATGGTAGGGCCTGGG 61.560 72.222 18.53 3.75 38.35 4.45
3475 5330 2.445845 CGATGGTAGGGCCTGGGA 60.446 66.667 18.53 0.00 38.35 4.37
3476 5331 2.511452 CGATGGTAGGGCCTGGGAG 61.511 68.421 18.53 0.00 38.35 4.30
3477 5332 2.039405 ATGGTAGGGCCTGGGAGG 60.039 66.667 18.53 0.00 38.80 4.30
3478 5333 3.739080 ATGGTAGGGCCTGGGAGGG 62.739 68.421 18.53 0.00 35.37 4.30
3495 5350 3.686760 GCCTGGGCCTCAGTTTTC 58.313 61.111 16.96 3.57 41.83 2.29
3496 5351 1.075659 GCCTGGGCCTCAGTTTTCT 59.924 57.895 16.96 0.00 41.83 2.52
3497 5352 1.246737 GCCTGGGCCTCAGTTTTCTG 61.247 60.000 16.96 5.05 41.83 3.02
3498 5353 1.246737 CCTGGGCCTCAGTTTTCTGC 61.247 60.000 16.96 0.00 46.59 4.26
3499 5354 1.228552 TGGGCCTCAGTTTTCTGCC 60.229 57.895 4.53 0.00 46.59 4.85
3500 5355 1.228552 GGGCCTCAGTTTTCTGCCA 60.229 57.895 0.84 0.00 46.59 4.92
3501 5356 0.613012 GGGCCTCAGTTTTCTGCCAT 60.613 55.000 0.84 0.00 46.59 4.40
3502 5357 0.529378 GGCCTCAGTTTTCTGCCATG 59.471 55.000 0.00 0.00 46.59 3.66
3503 5358 0.529378 GCCTCAGTTTTCTGCCATGG 59.471 55.000 7.63 7.63 46.59 3.66
3504 5359 1.180029 CCTCAGTTTTCTGCCATGGG 58.820 55.000 15.13 0.00 46.59 4.00
3505 5360 1.548582 CCTCAGTTTTCTGCCATGGGT 60.549 52.381 15.13 0.00 46.59 4.51
3506 5361 2.242043 CTCAGTTTTCTGCCATGGGTT 58.758 47.619 15.13 0.00 46.59 4.11
3507 5362 2.629617 CTCAGTTTTCTGCCATGGGTTT 59.370 45.455 15.13 0.00 46.59 3.27
3508 5363 3.037549 TCAGTTTTCTGCCATGGGTTTT 58.962 40.909 15.13 0.00 46.59 2.43
3509 5364 3.454082 TCAGTTTTCTGCCATGGGTTTTT 59.546 39.130 15.13 0.00 46.59 1.94
3523 5378 2.123251 TTTTTCAAGCCCGGCCCA 60.123 55.556 5.55 0.00 0.00 5.36
3524 5379 2.206536 TTTTTCAAGCCCGGCCCAG 61.207 57.895 5.55 0.00 0.00 4.45
3525 5380 4.676951 TTTCAAGCCCGGCCCAGG 62.677 66.667 5.55 0.00 0.00 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 3.436704 AGATTGTCACGCAATTACCACTG 59.563 43.478 0.00 0.00 46.90 3.66
12 13 3.436704 CAGATTGTCACGCAATTACCACT 59.563 43.478 0.00 0.00 46.90 4.00
13 14 3.426159 CCAGATTGTCACGCAATTACCAC 60.426 47.826 0.00 0.00 46.90 4.16
15 16 2.477863 GCCAGATTGTCACGCAATTACC 60.478 50.000 0.00 0.00 46.90 2.85
18 19 1.200716 CAGCCAGATTGTCACGCAATT 59.799 47.619 0.00 0.00 46.90 2.32
20 21 0.250252 TCAGCCAGATTGTCACGCAA 60.250 50.000 0.00 0.00 41.89 4.85
24 25 2.498167 AGTTGTCAGCCAGATTGTCAC 58.502 47.619 0.00 0.00 0.00 3.67
27 28 6.054860 AGTAATAGTTGTCAGCCAGATTGT 57.945 37.500 0.00 0.00 0.00 2.71
34 35 9.982651 TCAATAGATAAGTAATAGTTGTCAGCC 57.017 33.333 7.23 0.00 0.00 4.85
52 53 3.627395 TCACCCGCACTTTCAATAGAT 57.373 42.857 0.00 0.00 0.00 1.98
59 60 0.517316 GTGTCATCACCCGCACTTTC 59.483 55.000 0.00 0.00 38.51 2.62
73 74 2.727123 ACCAAAGTCACCATGTGTCA 57.273 45.000 0.00 0.00 34.79 3.58
82 83 1.136110 CCACCACCAAACCAAAGTCAC 59.864 52.381 0.00 0.00 0.00 3.67
87 88 1.479709 CAGTCCACCACCAAACCAAA 58.520 50.000 0.00 0.00 0.00 3.28
102 103 1.878953 AAATGTGTCGACCACCAGTC 58.121 50.000 14.12 0.00 43.85 3.51
103 104 1.946768 CAAAATGTGTCGACCACCAGT 59.053 47.619 14.12 3.58 43.85 4.00
104 105 1.946768 ACAAAATGTGTCGACCACCAG 59.053 47.619 14.12 4.94 43.85 4.00
105 106 2.045561 ACAAAATGTGTCGACCACCA 57.954 45.000 14.12 7.61 43.85 4.17
106 107 2.098443 ACAACAAAATGTGTCGACCACC 59.902 45.455 14.12 1.35 43.85 4.61
107 108 3.414549 ACAACAAAATGTGTCGACCAC 57.585 42.857 14.12 11.71 40.60 4.16
108 109 3.763902 CAACAACAAAATGTGTCGACCA 58.236 40.909 14.12 11.06 40.60 4.02
109 110 2.533942 GCAACAACAAAATGTGTCGACC 59.466 45.455 14.12 5.06 40.60 4.79
110 111 3.175152 TGCAACAACAAAATGTGTCGAC 58.825 40.909 9.11 9.11 40.60 4.20
111 112 3.494045 TGCAACAACAAAATGTGTCGA 57.506 38.095 0.00 0.00 40.60 4.20
112 113 5.107913 CCTTATGCAACAACAAAATGTGTCG 60.108 40.000 0.00 0.00 40.60 4.35
113 114 5.177327 CCCTTATGCAACAACAAAATGTGTC 59.823 40.000 0.00 0.00 40.60 3.67
121 122 3.820467 CACTCTCCCTTATGCAACAACAA 59.180 43.478 0.00 0.00 0.00 2.83
151 152 6.998074 TCTACAAAGATGACACCAAGTTGATT 59.002 34.615 3.87 0.00 0.00 2.57
220 222 2.375014 AATCCGGGTTGGTCTTGTTT 57.625 45.000 0.00 0.00 39.52 2.83
222 224 2.027469 GTCTAATCCGGGTTGGTCTTGT 60.027 50.000 11.16 0.00 39.52 3.16
223 225 2.236395 AGTCTAATCCGGGTTGGTCTTG 59.764 50.000 11.16 0.00 39.52 3.02
224 226 2.547990 AGTCTAATCCGGGTTGGTCTT 58.452 47.619 11.16 0.00 39.52 3.01
225 227 2.249309 AGTCTAATCCGGGTTGGTCT 57.751 50.000 11.16 7.58 39.52 3.85
228 230 2.040178 AGCTAGTCTAATCCGGGTTGG 58.960 52.381 11.16 7.52 40.09 3.77
229 231 3.118738 ACAAGCTAGTCTAATCCGGGTTG 60.119 47.826 11.16 0.00 37.90 3.77
232 234 3.458189 CAACAAGCTAGTCTAATCCGGG 58.542 50.000 0.00 0.00 0.00 5.73
233 235 3.458189 CCAACAAGCTAGTCTAATCCGG 58.542 50.000 0.00 0.00 0.00 5.14
234 236 3.132289 TCCCAACAAGCTAGTCTAATCCG 59.868 47.826 0.00 0.00 0.00 4.18
235 237 4.755266 TCCCAACAAGCTAGTCTAATCC 57.245 45.455 0.00 0.00 0.00 3.01
240 242 9.178758 CTATAAAAATTCCCAACAAGCTAGTCT 57.821 33.333 0.00 0.00 0.00 3.24
241 243 9.174166 TCTATAAAAATTCCCAACAAGCTAGTC 57.826 33.333 0.00 0.00 0.00 2.59
242 244 9.528489 TTCTATAAAAATTCCCAACAAGCTAGT 57.472 29.630 0.00 0.00 0.00 2.57
244 246 9.747898 TCTTCTATAAAAATTCCCAACAAGCTA 57.252 29.630 0.00 0.00 0.00 3.32
245 247 8.650143 TCTTCTATAAAAATTCCCAACAAGCT 57.350 30.769 0.00 0.00 0.00 3.74
246 248 9.705290 TTTCTTCTATAAAAATTCCCAACAAGC 57.295 29.630 0.00 0.00 0.00 4.01
252 254 8.736244 CGGAGTTTTCTTCTATAAAAATTCCCA 58.264 33.333 13.24 0.00 43.17 4.37
253 255 8.737175 ACGGAGTTTTCTTCTATAAAAATTCCC 58.263 33.333 13.24 2.96 43.17 3.97
254 256 9.556030 CACGGAGTTTTCTTCTATAAAAATTCC 57.444 33.333 10.40 10.40 41.61 3.01
257 259 9.503399 ACTCACGGAGTTTTCTTCTATAAAAAT 57.497 29.630 1.23 0.00 40.28 1.82
258 260 8.897872 ACTCACGGAGTTTTCTTCTATAAAAA 57.102 30.769 1.23 0.00 40.28 1.94
260 262 9.798994 GATACTCACGGAGTTTTCTTCTATAAA 57.201 33.333 11.09 0.00 40.28 1.40
261 263 8.963725 TGATACTCACGGAGTTTTCTTCTATAA 58.036 33.333 11.09 0.00 40.28 0.98
262 264 8.515695 TGATACTCACGGAGTTTTCTTCTATA 57.484 34.615 11.09 0.00 40.28 1.31
263 265 7.406031 TGATACTCACGGAGTTTTCTTCTAT 57.594 36.000 11.09 0.00 40.28 1.98
264 266 6.829229 TGATACTCACGGAGTTTTCTTCTA 57.171 37.500 11.09 0.00 40.28 2.10
265 267 5.723672 TGATACTCACGGAGTTTTCTTCT 57.276 39.130 11.09 0.00 40.28 2.85
266 268 6.780706 TTTGATACTCACGGAGTTTTCTTC 57.219 37.500 11.09 3.99 40.28 2.87
267 269 6.348540 GCATTTGATACTCACGGAGTTTTCTT 60.349 38.462 11.09 0.00 40.28 2.52
268 270 5.122396 GCATTTGATACTCACGGAGTTTTCT 59.878 40.000 11.09 0.00 40.28 2.52
269 271 5.122396 AGCATTTGATACTCACGGAGTTTTC 59.878 40.000 11.09 9.53 40.28 2.29
270 272 5.003804 AGCATTTGATACTCACGGAGTTTT 58.996 37.500 11.09 1.65 40.28 2.43
271 273 4.579869 AGCATTTGATACTCACGGAGTTT 58.420 39.130 11.09 4.67 40.28 2.66
272 274 4.184629 GAGCATTTGATACTCACGGAGTT 58.815 43.478 11.09 1.61 40.28 3.01
274 276 3.785486 TGAGCATTTGATACTCACGGAG 58.215 45.455 0.00 0.03 35.58 4.63
275 277 3.885724 TGAGCATTTGATACTCACGGA 57.114 42.857 0.00 0.00 35.58 4.69
276 278 3.242543 GCTTGAGCATTTGATACTCACGG 60.243 47.826 0.00 0.00 40.03 4.94
277 279 3.242543 GGCTTGAGCATTTGATACTCACG 60.243 47.826 5.24 0.00 44.36 4.35
278 280 3.691118 TGGCTTGAGCATTTGATACTCAC 59.309 43.478 5.24 0.00 44.36 3.51
279 281 3.954200 TGGCTTGAGCATTTGATACTCA 58.046 40.909 5.24 0.00 44.36 3.41
280 282 4.637534 TCTTGGCTTGAGCATTTGATACTC 59.362 41.667 5.24 0.00 44.36 2.59
281 283 4.397417 GTCTTGGCTTGAGCATTTGATACT 59.603 41.667 5.24 0.00 44.36 2.12
282 284 4.397417 AGTCTTGGCTTGAGCATTTGATAC 59.603 41.667 5.24 0.00 44.36 2.24
283 285 4.592942 AGTCTTGGCTTGAGCATTTGATA 58.407 39.130 5.24 0.00 44.36 2.15
284 286 3.428532 AGTCTTGGCTTGAGCATTTGAT 58.571 40.909 5.24 0.00 44.36 2.57
285 287 2.867624 AGTCTTGGCTTGAGCATTTGA 58.132 42.857 5.24 0.00 44.36 2.69
286 288 3.005050 TCAAGTCTTGGCTTGAGCATTTG 59.995 43.478 12.91 0.00 46.74 2.32
287 289 3.225104 TCAAGTCTTGGCTTGAGCATTT 58.775 40.909 12.91 0.00 46.74 2.32
288 290 2.867624 TCAAGTCTTGGCTTGAGCATT 58.132 42.857 12.91 0.00 46.74 3.56
289 291 2.574006 TCAAGTCTTGGCTTGAGCAT 57.426 45.000 12.91 0.00 46.74 3.79
294 296 1.002468 CACGGTTCAAGTCTTGGCTTG 60.002 52.381 12.66 8.51 45.18 4.01
295 297 1.308998 CACGGTTCAAGTCTTGGCTT 58.691 50.000 12.66 0.00 0.00 4.35
296 298 0.535102 CCACGGTTCAAGTCTTGGCT 60.535 55.000 12.66 0.00 0.00 4.75
297 299 0.818040 ACCACGGTTCAAGTCTTGGC 60.818 55.000 12.66 6.20 0.00 4.52
298 300 0.944386 CACCACGGTTCAAGTCTTGG 59.056 55.000 12.66 0.00 0.00 3.61
299 301 0.944386 CCACCACGGTTCAAGTCTTG 59.056 55.000 6.21 6.21 0.00 3.02
300 302 0.179029 CCCACCACGGTTCAAGTCTT 60.179 55.000 0.00 0.00 0.00 3.01
301 303 1.450211 CCCACCACGGTTCAAGTCT 59.550 57.895 0.00 0.00 0.00 3.24
302 304 2.258726 GCCCACCACGGTTCAAGTC 61.259 63.158 0.00 0.00 0.00 3.01
303 305 2.203294 GCCCACCACGGTTCAAGT 60.203 61.111 0.00 0.00 0.00 3.16
304 306 2.113139 AGCCCACCACGGTTCAAG 59.887 61.111 0.00 0.00 0.00 3.02
305 307 2.203280 CAGCCCACCACGGTTCAA 60.203 61.111 0.00 0.00 0.00 2.69
306 308 4.263572 CCAGCCCACCACGGTTCA 62.264 66.667 0.00 0.00 0.00 3.18
316 318 4.704833 GAGTTCGCAGCCAGCCCA 62.705 66.667 0.00 0.00 41.38 5.36
320 322 4.379243 ACGGGAGTTCGCAGCCAG 62.379 66.667 0.00 0.00 43.33 4.85
321 323 4.680237 CACGGGAGTTCGCAGCCA 62.680 66.667 0.00 0.00 44.67 4.75
322 324 4.681978 ACACGGGAGTTCGCAGCC 62.682 66.667 0.00 0.00 44.67 4.85
323 325 3.112709 GACACGGGAGTTCGCAGC 61.113 66.667 0.00 0.00 44.67 5.25
324 326 1.006102 AAGACACGGGAGTTCGCAG 60.006 57.895 0.00 0.00 44.67 5.18
325 327 1.300620 CAAGACACGGGAGTTCGCA 60.301 57.895 0.00 0.00 44.67 5.10
326 328 2.668280 GCAAGACACGGGAGTTCGC 61.668 63.158 0.00 0.00 44.67 4.70
327 329 2.027625 GGCAAGACACGGGAGTTCG 61.028 63.158 0.00 0.00 44.67 3.95
328 330 0.534203 TTGGCAAGACACGGGAGTTC 60.534 55.000 0.00 0.00 44.67 3.01
329 331 0.818040 GTTGGCAAGACACGGGAGTT 60.818 55.000 0.00 0.00 44.67 3.01
331 333 1.071471 AGTTGGCAAGACACGGGAG 59.929 57.895 0.00 0.00 0.00 4.30
332 334 1.227823 CAGTTGGCAAGACACGGGA 60.228 57.895 0.00 0.00 0.00 5.14
333 335 1.227823 TCAGTTGGCAAGACACGGG 60.228 57.895 0.00 0.00 0.00 5.28
334 336 1.845809 GCTCAGTTGGCAAGACACGG 61.846 60.000 0.00 0.00 0.00 4.94
335 337 0.882042 AGCTCAGTTGGCAAGACACG 60.882 55.000 0.00 0.00 0.00 4.49
336 338 1.801178 GTAGCTCAGTTGGCAAGACAC 59.199 52.381 0.00 0.00 0.00 3.67
337 339 1.270839 GGTAGCTCAGTTGGCAAGACA 60.271 52.381 0.00 0.00 0.00 3.41
338 340 1.443802 GGTAGCTCAGTTGGCAAGAC 58.556 55.000 0.00 0.00 0.00 3.01
339 341 0.324943 GGGTAGCTCAGTTGGCAAGA 59.675 55.000 0.00 0.00 0.00 3.02
340 342 0.326264 AGGGTAGCTCAGTTGGCAAG 59.674 55.000 0.00 0.00 0.00 4.01
341 343 0.324943 GAGGGTAGCTCAGTTGGCAA 59.675 55.000 0.00 0.00 0.00 4.52
342 344 0.835971 TGAGGGTAGCTCAGTTGGCA 60.836 55.000 0.00 0.00 0.00 4.92
343 345 0.107945 CTGAGGGTAGCTCAGTTGGC 60.108 60.000 0.00 0.00 42.30 4.52
349 351 2.171840 GTGAGAACTGAGGGTAGCTCA 58.828 52.381 0.00 0.00 37.24 4.26
350 352 2.452505 AGTGAGAACTGAGGGTAGCTC 58.547 52.381 0.00 0.00 33.13 4.09
351 353 2.614134 AGTGAGAACTGAGGGTAGCT 57.386 50.000 0.00 0.00 0.00 3.32
352 354 3.006967 TGAAAGTGAGAACTGAGGGTAGC 59.993 47.826 0.00 0.00 0.00 3.58
353 355 4.873746 TGAAAGTGAGAACTGAGGGTAG 57.126 45.455 0.00 0.00 0.00 3.18
354 356 5.825593 AATGAAAGTGAGAACTGAGGGTA 57.174 39.130 0.00 0.00 0.00 3.69
355 357 4.713792 AATGAAAGTGAGAACTGAGGGT 57.286 40.909 0.00 0.00 0.00 4.34
356 358 6.234177 ACTTAATGAAAGTGAGAACTGAGGG 58.766 40.000 0.00 0.00 46.90 4.30
386 388 1.337118 ACACATCCCACGCCATTTTT 58.663 45.000 0.00 0.00 0.00 1.94
387 389 2.208132 TACACATCCCACGCCATTTT 57.792 45.000 0.00 0.00 0.00 1.82
388 390 2.297701 GATACACATCCCACGCCATTT 58.702 47.619 0.00 0.00 0.00 2.32
389 391 1.211703 TGATACACATCCCACGCCATT 59.788 47.619 0.00 0.00 0.00 3.16
390 392 0.836606 TGATACACATCCCACGCCAT 59.163 50.000 0.00 0.00 0.00 4.40
391 393 0.107897 GTGATACACATCCCACGCCA 60.108 55.000 0.00 0.00 34.08 5.69
392 394 1.151777 CGTGATACACATCCCACGCC 61.152 60.000 0.00 0.00 44.24 5.68
393 395 2.297625 CGTGATACACATCCCACGC 58.702 57.895 0.00 0.00 44.24 5.34
395 397 1.480954 AGTCCGTGATACACATCCCAC 59.519 52.381 0.00 0.00 33.40 4.61
396 398 1.480545 CAGTCCGTGATACACATCCCA 59.519 52.381 0.00 0.00 33.40 4.37
397 399 1.480954 ACAGTCCGTGATACACATCCC 59.519 52.381 0.00 0.00 33.40 3.85
405 407 4.024387 GCTTTCAACAAACAGTCCGTGATA 60.024 41.667 0.00 0.00 0.00 2.15
411 413 1.864029 GCGGCTTTCAACAAACAGTCC 60.864 52.381 0.00 0.00 0.00 3.85
414 416 0.934436 CGGCGGCTTTCAACAAACAG 60.934 55.000 7.61 0.00 0.00 3.16
415 417 1.064946 CGGCGGCTTTCAACAAACA 59.935 52.632 7.61 0.00 0.00 2.83
418 420 2.517402 ACCGGCGGCTTTCAACAA 60.517 55.556 28.71 0.00 0.00 2.83
430 432 4.393680 TGTTTAGTGACATATTTGACCGGC 59.606 41.667 0.00 0.00 0.00 6.13
431 433 5.642063 AGTGTTTAGTGACATATTTGACCGG 59.358 40.000 0.00 0.00 0.00 5.28
433 435 8.995220 TGTTAGTGTTTAGTGACATATTTGACC 58.005 33.333 0.00 0.00 0.00 4.02
442 444 7.403421 CGATTGTTTGTTAGTGTTTAGTGACA 58.597 34.615 0.00 0.00 0.00 3.58
462 2168 0.179073 ATGGTTCTCTCGGGCGATTG 60.179 55.000 0.00 0.00 0.00 2.67
465 2171 0.391130 CAAATGGTTCTCTCGGGCGA 60.391 55.000 0.00 0.00 0.00 5.54
468 2174 2.472695 TCACAAATGGTTCTCTCGGG 57.527 50.000 0.00 0.00 0.00 5.14
470 2176 7.545362 AAGATAATCACAAATGGTTCTCTCG 57.455 36.000 0.00 0.00 32.65 4.04
498 2204 6.313905 CAGACGTTTCATCAGCCTAGTTTTAT 59.686 38.462 0.00 0.00 0.00 1.40
502 2208 3.258372 TCAGACGTTTCATCAGCCTAGTT 59.742 43.478 0.00 0.00 0.00 2.24
504 2210 3.443037 CTCAGACGTTTCATCAGCCTAG 58.557 50.000 0.00 0.00 0.00 3.02
505 2211 2.417379 GCTCAGACGTTTCATCAGCCTA 60.417 50.000 0.00 0.00 0.00 3.93
509 2215 3.614616 GGTTAGCTCAGACGTTTCATCAG 59.385 47.826 0.00 0.00 0.00 2.90
534 2240 1.717032 ACAGCTCCACACACCTAAGA 58.283 50.000 0.00 0.00 0.00 2.10
546 2252 6.546395 CATTTTCATGTACAGTAACAGCTCC 58.454 40.000 0.33 0.00 31.70 4.70
556 2262 2.731968 GCGGGTGCATTTTCATGTACAG 60.732 50.000 0.33 0.00 45.34 2.74
581 2287 8.891671 AATGCATTTTCATGTACACTCTTTTT 57.108 26.923 5.99 0.00 32.28 1.94
582 2288 8.891671 AAATGCATTTTCATGTACACTCTTTT 57.108 26.923 18.99 0.00 32.28 2.27
583 2289 8.891671 AAAATGCATTTTCATGTACACTCTTT 57.108 26.923 27.73 4.05 35.18 2.52
584 2290 8.891671 AAAAATGCATTTTCATGTACACTCTT 57.108 26.923 31.78 13.06 38.92 2.85
612 2318 7.706179 CAGTTTCTTCATTCTAAGTGGCAAAAA 59.294 33.333 0.00 0.00 0.00 1.94
619 2325 7.439356 TCTGTGTCAGTTTCTTCATTCTAAGTG 59.561 37.037 0.00 0.00 32.61 3.16
625 2334 4.508124 ACGTCTGTGTCAGTTTCTTCATTC 59.492 41.667 0.00 0.00 32.61 2.67
660 2373 0.030101 TTGTTGTTTAGCTGCCGCAC 59.970 50.000 2.05 0.00 39.10 5.34
665 2378 5.588240 AGGTTTTAGTTGTTGTTTAGCTGC 58.412 37.500 0.00 0.00 0.00 5.25
677 2390 2.162681 CAGCTGGGGAGGTTTTAGTTG 58.837 52.381 5.57 0.00 0.00 3.16
678 2391 1.075536 CCAGCTGGGGAGGTTTTAGTT 59.924 52.381 26.14 0.00 0.00 2.24
679 2392 0.698818 CCAGCTGGGGAGGTTTTAGT 59.301 55.000 26.14 0.00 0.00 2.24
680 2393 0.991920 TCCAGCTGGGGAGGTTTTAG 59.008 55.000 32.23 2.19 37.22 1.85
681 2394 1.074889 GTTCCAGCTGGGGAGGTTTTA 59.925 52.381 32.23 6.93 38.42 1.52
682 2395 0.178961 GTTCCAGCTGGGGAGGTTTT 60.179 55.000 32.23 0.00 38.42 2.43
683 2396 1.068352 AGTTCCAGCTGGGGAGGTTT 61.068 55.000 32.23 8.75 38.42 3.27
720 2438 0.179029 AGCACAAGGTTTGTACGCCT 60.179 50.000 0.00 0.00 43.23 5.52
726 2444 2.456577 AGGTTTCAGCACAAGGTTTGT 58.543 42.857 0.00 0.00 46.75 2.83
727 2445 3.525268 AAGGTTTCAGCACAAGGTTTG 57.475 42.857 0.00 0.00 0.00 2.93
739 2457 0.958091 CGTCATGCCCAAAGGTTTCA 59.042 50.000 0.00 0.00 34.57 2.69
777 2498 5.482908 CTTGTGCATAGTCAGGTAGTCTTT 58.517 41.667 0.00 0.00 0.00 2.52
812 2533 1.737793 CGTGGAGTTATTTGGCTGGTC 59.262 52.381 0.00 0.00 0.00 4.02
817 2538 2.973945 AGAGACGTGGAGTTATTTGGC 58.026 47.619 0.00 0.00 0.00 4.52
846 2571 6.073331 GGCAAGTATCTGATTGAGCAGTTATC 60.073 42.308 0.00 0.00 37.20 1.75
889 2621 7.201444 CGAGATTGCTTAGTGTTACGAAAATCT 60.201 37.037 0.00 0.00 0.00 2.40
901 2633 9.855361 CATATAAAAACTCGAGATTGCTTAGTG 57.145 33.333 21.68 9.29 0.00 2.74
910 2642 7.492524 TGTGCTCTCATATAAAAACTCGAGAT 58.507 34.615 21.68 3.75 0.00 2.75
912 2644 7.063426 TGTTGTGCTCTCATATAAAAACTCGAG 59.937 37.037 11.84 11.84 0.00 4.04
917 2649 9.118236 GTTCTTGTTGTGCTCTCATATAAAAAC 57.882 33.333 0.00 0.00 0.00 2.43
922 2654 7.414429 GCATTGTTCTTGTTGTGCTCTCATATA 60.414 37.037 0.00 0.00 0.00 0.86
923 2655 6.624423 GCATTGTTCTTGTTGTGCTCTCATAT 60.624 38.462 0.00 0.00 0.00 1.78
924 2656 5.335113 GCATTGTTCTTGTTGTGCTCTCATA 60.335 40.000 0.00 0.00 0.00 2.15
925 2657 4.558095 GCATTGTTCTTGTTGTGCTCTCAT 60.558 41.667 0.00 0.00 0.00 2.90
926 2658 3.243168 GCATTGTTCTTGTTGTGCTCTCA 60.243 43.478 0.00 0.00 0.00 3.27
950 2706 5.477607 TTGCGTTATATATGTAGGCCTGT 57.522 39.130 17.99 3.69 0.00 4.00
958 2714 5.597813 GCAGAAGCTTGCGTTATATATGT 57.402 39.130 2.10 0.00 37.91 2.29
991 2756 1.862602 GCCGAAGACATTTTGCCGGT 61.863 55.000 1.90 0.00 39.18 5.28
994 2759 0.532115 ATGGCCGAAGACATTTTGCC 59.468 50.000 0.00 0.00 36.45 4.52
1076 2845 3.730761 CGCTGTGGGAGTTGCTGC 61.731 66.667 0.00 0.00 0.00 5.25
1081 2850 2.750350 CCTTCCGCTGTGGGAGTT 59.250 61.111 14.33 0.00 42.62 3.01
1090 2859 2.125512 GACGACATGCCTTCCGCT 60.126 61.111 0.00 0.00 38.78 5.52
1128 2897 4.821589 CAGCTCGGCGGAACCCTC 62.822 72.222 7.21 0.00 33.26 4.30
1153 2922 2.418334 GGAGTACTTCACCGGAATGGAC 60.418 54.545 9.46 5.06 42.00 4.02
1171 2940 2.159517 GCAGAGGTTAATTTGTGCGGAG 60.160 50.000 0.00 0.00 0.00 4.63
1173 2942 1.539388 TGCAGAGGTTAATTTGTGCGG 59.461 47.619 6.75 0.00 33.52 5.69
1324 3104 2.943345 GCTCCGCCGATGCATTACG 61.943 63.158 0.00 5.28 37.32 3.18
1876 3674 3.775654 CTGTCCCGGCTGAGGTCC 61.776 72.222 0.00 0.00 0.00 4.46
1937 3735 1.268283 GGCAGGCAGTAGGAGAAGGT 61.268 60.000 0.00 0.00 0.00 3.50
2056 3854 1.516423 GGAGTAGAGGTTCGGGTGC 59.484 63.158 0.00 0.00 0.00 5.01
2104 3902 0.105039 GCGAGATCTTGGAATCCCGT 59.895 55.000 12.06 0.00 30.48 5.28
2120 3918 0.808125 CCAACGAATTTGATGGGCGA 59.192 50.000 13.11 0.00 37.39 5.54
2335 4139 0.396435 TGTCAAGGTCCATTGTCGCT 59.604 50.000 0.00 0.00 0.00 4.93
2341 4145 3.261897 AGTTCTCGATGTCAAGGTCCATT 59.738 43.478 0.00 0.00 0.00 3.16
2462 4266 3.197790 CGTCATCCCTTGCGCCAG 61.198 66.667 4.18 2.17 0.00 4.85
2470 4274 1.686110 GACCACCTCCGTCATCCCT 60.686 63.158 0.00 0.00 0.00 4.20
2516 4320 3.279875 GCAGCGGCGGGGAATTAG 61.280 66.667 9.78 0.00 0.00 1.73
2581 4433 0.039256 GGCGCTCATTTGTGAAGCAA 60.039 50.000 7.64 0.00 34.87 3.91
2625 4477 6.322969 TCCAATCCACAGTTACATACGACTAT 59.677 38.462 0.00 0.00 0.00 2.12
2628 4480 4.751060 TCCAATCCACAGTTACATACGAC 58.249 43.478 0.00 0.00 0.00 4.34
2646 4498 4.903149 TCCTGGGAAGGATATAACTCCAA 58.097 43.478 0.00 0.00 37.81 3.53
2684 4536 7.185318 TCGTGGGTTAAAAGATATAACTCCA 57.815 36.000 0.00 0.00 33.65 3.86
2685 4537 7.713942 ACATCGTGGGTTAAAAGATATAACTCC 59.286 37.037 0.00 0.00 33.65 3.85
2686 4538 8.658499 ACATCGTGGGTTAAAAGATATAACTC 57.342 34.615 0.00 0.00 34.89 3.01
2687 4539 9.106070 GAACATCGTGGGTTAAAAGATATAACT 57.894 33.333 0.00 0.00 34.44 2.24
2688 4540 9.106070 AGAACATCGTGGGTTAAAAGATATAAC 57.894 33.333 0.00 0.00 33.47 1.89
2689 4541 9.675464 AAGAACATCGTGGGTTAAAAGATATAA 57.325 29.630 0.00 0.00 0.00 0.98
2693 4545 6.894339 AAAGAACATCGTGGGTTAAAAGAT 57.106 33.333 0.00 0.00 0.00 2.40
2768 4623 2.989840 CTCGGTAGAATCGATTGATGCC 59.010 50.000 16.96 15.01 36.01 4.40
2769 4624 2.989840 CCTCGGTAGAATCGATTGATGC 59.010 50.000 16.96 7.40 36.01 3.91
2778 4633 2.093658 TGTCTTTGGCCTCGGTAGAATC 60.094 50.000 3.32 0.00 0.00 2.52
2783 4638 1.550130 CCCTGTCTTTGGCCTCGGTA 61.550 60.000 3.32 0.00 0.00 4.02
2784 4639 2.750350 CCTGTCTTTGGCCTCGGT 59.250 61.111 3.32 0.00 0.00 4.69
2831 4686 2.617308 TGGCTTAGTCTTATCGAGGTCG 59.383 50.000 0.00 0.00 41.45 4.79
2837 4692 1.270358 GGCCCTGGCTTAGTCTTATCG 60.270 57.143 8.29 0.00 41.60 2.92
2841 4696 1.275421 GGAGGCCCTGGCTTAGTCTT 61.275 60.000 8.29 0.00 38.98 3.01
2845 4700 0.761802 CTAAGGAGGCCCTGGCTTAG 59.238 60.000 8.29 4.52 43.48 2.18
2847 4702 0.985490 CTCTAAGGAGGCCCTGGCTT 60.985 60.000 8.29 0.00 43.48 4.35
2862 4717 1.082679 CAGCGTCGTCTCCGTCTCTA 61.083 60.000 0.00 0.00 35.01 2.43
2864 4719 2.098680 CAGCGTCGTCTCCGTCTC 59.901 66.667 0.00 0.00 35.01 3.36
2879 4734 1.812922 CAAGCTCTACCGCCTGCAG 60.813 63.158 6.78 6.78 0.00 4.41
2930 4785 0.178992 CCATCACACCCACACCAGTT 60.179 55.000 0.00 0.00 0.00 3.16
2974 4829 1.347707 TCTTCTCCAACGAAGGCATGT 59.652 47.619 0.00 0.00 40.56 3.21
3010 4865 3.200605 TCCCTATAACCCCCTTTTCGAAC 59.799 47.826 0.00 0.00 0.00 3.95
3015 4870 3.465966 GACCATCCCTATAACCCCCTTTT 59.534 47.826 0.00 0.00 0.00 2.27
3042 4897 0.383491 CGTCATACTACGTACCGCCG 60.383 60.000 0.00 0.00 38.07 6.46
3046 4901 1.002033 CCAGCCGTCATACTACGTACC 60.002 57.143 0.00 0.00 41.27 3.34
3059 4914 4.711949 CTTGCCTCTGCCAGCCGT 62.712 66.667 0.00 0.00 36.33 5.68
3064 4919 2.858476 TTCCCCTTGCCTCTGCCA 60.858 61.111 0.00 0.00 36.33 4.92
3074 4929 3.500635 CTGTCCAGCCTTCCCCTT 58.499 61.111 0.00 0.00 0.00 3.95
3085 4940 3.535629 CTGACCGCCTTGCTGTCCA 62.536 63.158 7.93 0.00 41.00 4.02
3091 4946 2.982744 GCCTTTCTGACCGCCTTGC 61.983 63.158 0.00 0.00 0.00 4.01
3116 4971 3.190849 CGGTCGACATGCCTGCTG 61.191 66.667 18.91 0.00 0.00 4.41
3121 4976 3.799755 GTTGCCGGTCGACATGCC 61.800 66.667 18.91 0.00 0.00 4.40
3126 4981 2.100631 CCATCTGTTGCCGGTCGAC 61.101 63.158 7.13 7.13 0.00 4.20
3154 5009 3.555795 GCGATGCATATCTTCTTCCCTCA 60.556 47.826 0.00 0.00 0.00 3.86
3169 5024 1.625759 CGTGTTGCTACAGCGATGCA 61.626 55.000 0.00 0.00 45.83 3.96
3191 5046 2.092321 AGTACTAGTCGTGAGGGATGCT 60.092 50.000 0.00 0.00 0.00 3.79
3194 5049 2.933573 CCAGTACTAGTCGTGAGGGAT 58.066 52.381 0.00 0.00 0.00 3.85
3200 5055 2.025155 AGATGGCCAGTACTAGTCGTG 58.975 52.381 13.05 0.00 0.00 4.35
3206 5061 1.414158 GCCTGAGATGGCCAGTACTA 58.586 55.000 13.05 0.00 46.82 1.82
3207 5062 2.216148 GCCTGAGATGGCCAGTACT 58.784 57.895 13.05 10.74 46.82 2.73
3208 5063 4.865865 GCCTGAGATGGCCAGTAC 57.134 61.111 13.05 5.34 46.82 2.73
3248 5103 0.250770 CCTAGATTTTAGGGCCGGGC 60.251 60.000 22.00 22.00 0.00 6.13
3249 5104 0.400594 CCCTAGATTTTAGGGCCGGG 59.599 60.000 2.18 0.00 46.81 5.73
3255 5110 3.704800 GCCTAGGCCCTAGATTTTAGG 57.295 52.381 24.19 4.11 36.26 2.69
3300 5155 0.600057 CTCAAAACTCAGGCCCAAGC 59.400 55.000 0.00 0.00 38.76 4.01
3301 5156 0.600057 GCTCAAAACTCAGGCCCAAG 59.400 55.000 0.00 0.00 0.00 3.61
3302 5157 0.827507 GGCTCAAAACTCAGGCCCAA 60.828 55.000 0.00 0.00 37.12 4.12
3303 5158 1.228552 GGCTCAAAACTCAGGCCCA 60.229 57.895 0.00 0.00 37.12 5.36
3304 5159 3.686760 GGCTCAAAACTCAGGCCC 58.313 61.111 0.00 0.00 37.12 5.80
3306 5161 1.527433 GGTGGGCTCAAAACTCAGGC 61.527 60.000 0.00 0.00 34.44 4.85
3307 5162 0.178992 TGGTGGGCTCAAAACTCAGG 60.179 55.000 0.00 0.00 0.00 3.86
3308 5163 1.242076 CTGGTGGGCTCAAAACTCAG 58.758 55.000 0.00 0.00 0.00 3.35
3309 5164 0.823356 GCTGGTGGGCTCAAAACTCA 60.823 55.000 0.00 0.00 0.00 3.41
3310 5165 0.823356 TGCTGGTGGGCTCAAAACTC 60.823 55.000 0.00 0.00 0.00 3.01
3311 5166 0.396974 TTGCTGGTGGGCTCAAAACT 60.397 50.000 0.00 0.00 0.00 2.66
3312 5167 0.032540 CTTGCTGGTGGGCTCAAAAC 59.967 55.000 0.00 0.00 0.00 2.43
3313 5168 1.747325 GCTTGCTGGTGGGCTCAAAA 61.747 55.000 0.00 0.00 0.00 2.44
3314 5169 2.202395 GCTTGCTGGTGGGCTCAAA 61.202 57.895 0.00 0.00 0.00 2.69
3315 5170 2.598394 GCTTGCTGGTGGGCTCAA 60.598 61.111 0.00 0.00 0.00 3.02
3316 5171 4.666253 GGCTTGCTGGTGGGCTCA 62.666 66.667 0.00 0.00 0.00 4.26
3321 5176 3.970410 TCCAGGGCTTGCTGGTGG 61.970 66.667 7.95 2.53 41.28 4.61
3322 5177 2.674380 GTCCAGGGCTTGCTGGTG 60.674 66.667 7.95 0.00 41.28 4.17
3323 5178 4.335647 CGTCCAGGGCTTGCTGGT 62.336 66.667 7.95 0.00 41.28 4.00
3334 5189 4.351054 AAGCCCAAGCCCGTCCAG 62.351 66.667 0.00 0.00 41.25 3.86
3335 5190 4.659172 CAAGCCCAAGCCCGTCCA 62.659 66.667 0.00 0.00 41.25 4.02
3340 5195 1.050421 AATATGCCAAGCCCAAGCCC 61.050 55.000 0.00 0.00 41.25 5.19
3341 5196 0.105408 CAATATGCCAAGCCCAAGCC 59.895 55.000 0.00 0.00 41.25 4.35
3342 5197 0.105408 CCAATATGCCAAGCCCAAGC 59.895 55.000 0.00 0.00 40.32 4.01
3343 5198 0.105408 GCCAATATGCCAAGCCCAAG 59.895 55.000 0.00 0.00 0.00 3.61
3344 5199 0.616964 TGCCAATATGCCAAGCCCAA 60.617 50.000 0.00 0.00 0.00 4.12
3345 5200 0.398806 ATGCCAATATGCCAAGCCCA 60.399 50.000 0.00 0.00 0.00 5.36
3346 5201 0.760572 AATGCCAATATGCCAAGCCC 59.239 50.000 0.00 0.00 0.00 5.19
3347 5202 2.625695 AAATGCCAATATGCCAAGCC 57.374 45.000 0.00 0.00 0.00 4.35
3348 5203 4.512571 CCTTAAAATGCCAATATGCCAAGC 59.487 41.667 0.00 0.00 0.00 4.01
3349 5204 5.916318 TCCTTAAAATGCCAATATGCCAAG 58.084 37.500 0.00 0.00 0.00 3.61
3350 5205 5.946942 TCCTTAAAATGCCAATATGCCAA 57.053 34.783 0.00 0.00 0.00 4.52
3351 5206 5.660417 TCTTCCTTAAAATGCCAATATGCCA 59.340 36.000 0.00 0.00 0.00 4.92
3352 5207 6.160576 TCTTCCTTAAAATGCCAATATGCC 57.839 37.500 0.00 0.00 0.00 4.40
3353 5208 6.218746 CCTCTTCCTTAAAATGCCAATATGC 58.781 40.000 0.00 0.00 0.00 3.14
3354 5209 6.218746 GCCTCTTCCTTAAAATGCCAATATG 58.781 40.000 0.00 0.00 0.00 1.78
3355 5210 5.305386 GGCCTCTTCCTTAAAATGCCAATAT 59.695 40.000 0.00 0.00 37.58 1.28
3356 5211 4.649218 GGCCTCTTCCTTAAAATGCCAATA 59.351 41.667 0.00 0.00 37.58 1.90
3357 5212 3.452264 GGCCTCTTCCTTAAAATGCCAAT 59.548 43.478 0.00 0.00 37.58 3.16
3358 5213 2.831526 GGCCTCTTCCTTAAAATGCCAA 59.168 45.455 0.00 0.00 37.58 4.52
3359 5214 2.042979 AGGCCTCTTCCTTAAAATGCCA 59.957 45.455 0.00 0.00 40.08 4.92
3360 5215 2.428530 CAGGCCTCTTCCTTAAAATGCC 59.571 50.000 0.00 0.00 37.91 4.40
3361 5216 2.428530 CCAGGCCTCTTCCTTAAAATGC 59.571 50.000 0.00 0.00 33.25 3.56
3362 5217 2.428530 GCCAGGCCTCTTCCTTAAAATG 59.571 50.000 0.00 0.00 33.25 2.32
3363 5218 2.624293 GGCCAGGCCTCTTCCTTAAAAT 60.624 50.000 24.99 0.00 46.69 1.82
3364 5219 1.272480 GGCCAGGCCTCTTCCTTAAAA 60.272 52.381 24.99 0.00 46.69 1.52
3365 5220 0.331616 GGCCAGGCCTCTTCCTTAAA 59.668 55.000 24.99 0.00 46.69 1.52
3366 5221 1.999346 GGCCAGGCCTCTTCCTTAA 59.001 57.895 24.99 0.00 46.69 1.85
3367 5222 3.741325 GGCCAGGCCTCTTCCTTA 58.259 61.111 24.99 0.00 46.69 2.69
3398 5253 0.332972 AGCCCTGAAAAGCCCTTAGG 59.667 55.000 0.00 0.00 0.00 2.69
3399 5254 2.222227 AAGCCCTGAAAAGCCCTTAG 57.778 50.000 0.00 0.00 0.00 2.18
3400 5255 2.694616 AAAGCCCTGAAAAGCCCTTA 57.305 45.000 0.00 0.00 0.00 2.69
3401 5256 1.806496 AAAAGCCCTGAAAAGCCCTT 58.194 45.000 0.00 0.00 0.00 3.95
3402 5257 1.806496 AAAAAGCCCTGAAAAGCCCT 58.194 45.000 0.00 0.00 0.00 5.19
3403 5258 2.289444 GGTAAAAAGCCCTGAAAAGCCC 60.289 50.000 0.00 0.00 0.00 5.19
3404 5259 2.367241 TGGTAAAAAGCCCTGAAAAGCC 59.633 45.455 0.00 0.00 0.00 4.35
3405 5260 3.320826 TCTGGTAAAAAGCCCTGAAAAGC 59.679 43.478 0.00 0.00 0.00 3.51
3406 5261 5.473039 CATCTGGTAAAAAGCCCTGAAAAG 58.527 41.667 0.00 0.00 0.00 2.27
3407 5262 4.283212 CCATCTGGTAAAAAGCCCTGAAAA 59.717 41.667 0.00 0.00 0.00 2.29
3408 5263 3.831911 CCATCTGGTAAAAAGCCCTGAAA 59.168 43.478 0.00 0.00 0.00 2.69
3409 5264 3.430453 CCATCTGGTAAAAAGCCCTGAA 58.570 45.455 0.00 0.00 0.00 3.02
3410 5265 2.291540 CCCATCTGGTAAAAAGCCCTGA 60.292 50.000 0.00 0.00 0.00 3.86
3411 5266 2.102578 CCCATCTGGTAAAAAGCCCTG 58.897 52.381 0.00 0.00 0.00 4.45
3412 5267 1.619704 GCCCATCTGGTAAAAAGCCCT 60.620 52.381 0.00 0.00 36.04 5.19
3413 5268 0.824109 GCCCATCTGGTAAAAAGCCC 59.176 55.000 0.00 0.00 36.04 5.19
3414 5269 0.824109 GGCCCATCTGGTAAAAAGCC 59.176 55.000 0.00 0.00 36.04 4.35
3415 5270 0.455815 CGGCCCATCTGGTAAAAAGC 59.544 55.000 0.00 0.00 36.04 3.51
3416 5271 1.102978 CCGGCCCATCTGGTAAAAAG 58.897 55.000 0.00 0.00 36.43 2.27
3417 5272 0.323908 CCCGGCCCATCTGGTAAAAA 60.324 55.000 0.00 0.00 39.73 1.94
3418 5273 1.304952 CCCGGCCCATCTGGTAAAA 59.695 57.895 0.00 0.00 39.73 1.52
3419 5274 3.003230 CCCGGCCCATCTGGTAAA 58.997 61.111 0.00 0.00 39.73 2.01
3420 5275 3.804329 GCCCGGCCCATCTGGTAA 61.804 66.667 0.00 0.00 39.73 2.85
3421 5276 4.815973 AGCCCGGCCCATCTGGTA 62.816 66.667 5.55 0.00 39.73 3.25
3430 5285 3.860930 TTCAAGTCCAAGCCCGGCC 62.861 63.158 5.55 0.00 0.00 6.13
3431 5286 1.460273 TTTTCAAGTCCAAGCCCGGC 61.460 55.000 0.00 0.00 0.00 6.13
3432 5287 0.598065 CTTTTCAAGTCCAAGCCCGG 59.402 55.000 0.00 0.00 0.00 5.73
3433 5288 1.318576 ACTTTTCAAGTCCAAGCCCG 58.681 50.000 0.00 0.00 37.02 6.13
3434 5289 2.820197 CCTACTTTTCAAGTCCAAGCCC 59.180 50.000 0.00 0.00 41.77 5.19
3435 5290 2.229062 GCCTACTTTTCAAGTCCAAGCC 59.771 50.000 0.00 0.00 41.77 4.35
3436 5291 2.229062 GGCCTACTTTTCAAGTCCAAGC 59.771 50.000 0.00 0.00 41.77 4.01
3437 5292 2.820197 GGGCCTACTTTTCAAGTCCAAG 59.180 50.000 0.84 0.00 41.77 3.61
3438 5293 2.812613 CGGGCCTACTTTTCAAGTCCAA 60.813 50.000 0.84 0.00 41.77 3.53
3439 5294 1.271163 CGGGCCTACTTTTCAAGTCCA 60.271 52.381 0.84 0.00 41.77 4.02
3440 5295 1.002773 TCGGGCCTACTTTTCAAGTCC 59.997 52.381 0.84 0.00 41.77 3.85
3441 5296 2.467566 TCGGGCCTACTTTTCAAGTC 57.532 50.000 0.84 0.00 41.77 3.01
3442 5297 2.618045 CCATCGGGCCTACTTTTCAAGT 60.618 50.000 0.84 0.00 45.40 3.16
3443 5298 2.017049 CCATCGGGCCTACTTTTCAAG 58.983 52.381 0.84 0.00 0.00 3.02
3444 5299 1.353022 ACCATCGGGCCTACTTTTCAA 59.647 47.619 0.84 0.00 37.90 2.69
3445 5300 0.988832 ACCATCGGGCCTACTTTTCA 59.011 50.000 0.84 0.00 37.90 2.69
3446 5301 2.484947 CCTACCATCGGGCCTACTTTTC 60.485 54.545 0.84 0.00 37.90 2.29
3447 5302 1.489230 CCTACCATCGGGCCTACTTTT 59.511 52.381 0.84 0.00 37.90 2.27
3448 5303 1.129058 CCTACCATCGGGCCTACTTT 58.871 55.000 0.84 0.00 37.90 2.66
3449 5304 0.763223 CCCTACCATCGGGCCTACTT 60.763 60.000 0.84 0.00 37.90 2.24
3450 5305 1.152312 CCCTACCATCGGGCCTACT 60.152 63.158 0.84 0.00 37.90 2.57
3451 5306 3.468063 CCCTACCATCGGGCCTAC 58.532 66.667 0.84 0.00 37.90 3.18
3456 5311 3.560251 CCAGGCCCTACCATCGGG 61.560 72.222 0.00 0.00 44.89 5.14
3457 5312 3.560251 CCCAGGCCCTACCATCGG 61.560 72.222 0.00 0.00 43.14 4.18
3458 5313 2.445845 TCCCAGGCCCTACCATCG 60.446 66.667 0.00 0.00 43.14 3.84
3459 5314 2.150051 CCTCCCAGGCCCTACCATC 61.150 68.421 0.00 0.00 43.14 3.51
3460 5315 2.039405 CCTCCCAGGCCCTACCAT 60.039 66.667 0.00 0.00 43.14 3.55
3461 5316 4.431524 CCCTCCCAGGCCCTACCA 62.432 72.222 0.00 0.00 43.14 3.25
3481 5336 1.228552 GGCAGAAAACTGAGGCCCA 60.229 57.895 0.00 0.00 38.70 5.36
3482 5337 0.613012 ATGGCAGAAAACTGAGGCCC 60.613 55.000 0.00 0.00 43.96 5.80
3483 5338 0.529378 CATGGCAGAAAACTGAGGCC 59.471 55.000 0.00 0.00 44.82 5.19
3484 5339 0.529378 CCATGGCAGAAAACTGAGGC 59.471 55.000 0.00 0.00 0.00 4.70
3485 5340 1.180029 CCCATGGCAGAAAACTGAGG 58.820 55.000 6.09 0.00 0.00 3.86
3486 5341 1.915141 ACCCATGGCAGAAAACTGAG 58.085 50.000 6.09 0.00 0.00 3.35
3487 5342 2.380064 AACCCATGGCAGAAAACTGA 57.620 45.000 6.09 0.00 0.00 3.41
3488 5343 3.473923 AAAACCCATGGCAGAAAACTG 57.526 42.857 6.09 0.00 0.00 3.16
3506 5361 2.123251 TGGGCCGGGCTTGAAAAA 60.123 55.556 28.80 2.15 0.00 1.94
3507 5362 2.600173 CTGGGCCGGGCTTGAAAA 60.600 61.111 28.80 5.97 0.00 2.29
3508 5363 4.676951 CCTGGGCCGGGCTTGAAA 62.677 66.667 28.80 7.77 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.