Multiple sequence alignment - TraesCS7D01G225400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G225400 chr7D 100.000 5457 0 0 1 5457 185182417 185176961 0.000000e+00 10078.0
1 TraesCS7D01G225400 chr7D 100.000 290 0 0 5650 5939 185176768 185176479 2.440000e-148 536.0
2 TraesCS7D01G225400 chr7D 97.701 174 4 0 2029 2202 574068852 574068679 3.480000e-77 300.0
3 TraesCS7D01G225400 chr7D 100.000 36 0 0 5318 5353 112258737 112258702 3.840000e-07 67.6
4 TraesCS7D01G225400 chr7D 100.000 36 0 0 5318 5353 287193870 287193835 3.840000e-07 67.6
5 TraesCS7D01G225400 chr7D 93.182 44 3 0 5318 5361 21949701 21949658 1.380000e-06 65.8
6 TraesCS7D01G225400 chr7B 97.547 1182 12 3 3093 4257 327455152 327453971 0.000000e+00 2006.0
7 TraesCS7D01G225400 chr7B 96.062 965 31 4 4359 5317 327453970 327453007 0.000000e+00 1565.0
8 TraesCS7D01G225400 chr7B 98.100 842 12 2 2191 3028 327455972 327455131 0.000000e+00 1463.0
9 TraesCS7D01G225400 chr7B 93.432 807 36 7 802 1604 327457222 327456429 0.000000e+00 1181.0
10 TraesCS7D01G225400 chr7B 96.560 436 12 2 1600 2033 327456402 327455968 0.000000e+00 719.0
11 TraesCS7D01G225400 chr7B 89.552 268 20 6 556 817 327457502 327457237 3.430000e-87 333.0
12 TraesCS7D01G225400 chr7B 86.166 253 15 7 5685 5937 327452492 327452260 7.640000e-64 255.0
13 TraesCS7D01G225400 chr7B 100.000 68 0 0 3022 3089 261036703 261036770 6.250000e-25 126.0
14 TraesCS7D01G225400 chr7B 100.000 33 0 0 5411 5443 166988677 166988645 1.790000e-05 62.1
15 TraesCS7D01G225400 chr7B 92.500 40 1 2 5087 5126 90193435 90193398 8.310000e-04 56.5
16 TraesCS7D01G225400 chr7B 100.000 28 0 0 5097 5124 151436684 151436711 1.100000e-02 52.8
17 TraesCS7D01G225400 chr7A 93.177 894 52 5 3305 4196 192882901 192882015 0.000000e+00 1304.0
18 TraesCS7D01G225400 chr7A 89.765 977 54 21 4361 5317 192881924 192880974 0.000000e+00 1208.0
19 TraesCS7D01G225400 chr7A 90.858 897 48 10 719 1604 192891231 192890358 0.000000e+00 1171.0
20 TraesCS7D01G225400 chr7A 85.675 726 69 16 2335 3028 192890179 192889457 0.000000e+00 732.0
21 TraesCS7D01G225400 chr7A 92.254 142 11 0 1606 1747 192890325 192890184 1.010000e-47 202.0
22 TraesCS7D01G225400 chr7A 92.248 129 8 2 515 642 192892176 192892049 1.310000e-41 182.0
23 TraesCS7D01G225400 chr7A 96.875 96 2 1 5363 5457 192880881 192880786 6.160000e-35 159.0
24 TraesCS7D01G225400 chr7A 96.364 55 2 0 63 117 637050994 637051048 2.280000e-14 91.6
25 TraesCS7D01G225400 chr7A 100.000 34 0 0 5412 5445 215185238 215185205 4.970000e-06 63.9
26 TraesCS7D01G225400 chr5D 98.454 388 1 4 120 503 364374876 364374490 0.000000e+00 678.0
27 TraesCS7D01G225400 chr5D 95.349 43 0 2 5318 5358 547065113 547065071 3.840000e-07 67.6
28 TraesCS7D01G225400 chr4D 98.454 388 1 4 120 503 275356929 275356543 0.000000e+00 678.0
29 TraesCS7D01G225400 chr4D 98.450 387 2 3 120 503 348933265 348933650 0.000000e+00 678.0
30 TraesCS7D01G225400 chr4D 99.398 166 1 0 2027 2192 10770692 10770527 9.670000e-78 302.0
31 TraesCS7D01G225400 chr4D 98.817 169 2 0 2024 2192 67327480 67327648 9.670000e-78 302.0
32 TraesCS7D01G225400 chr4D 95.726 117 5 0 4255 4371 155576796 155576680 7.860000e-44 189.0
33 TraesCS7D01G225400 chr4D 94.068 118 6 1 4246 4362 122197748 122197865 1.700000e-40 178.0
34 TraesCS7D01G225400 chr4D 90.323 93 6 2 63 152 324210353 324210261 1.050000e-22 119.0
35 TraesCS7D01G225400 chr4D 100.000 63 0 0 3027 3089 195030645 195030583 3.760000e-22 117.0
36 TraesCS7D01G225400 chr4D 100.000 61 0 0 1 61 275356829 275356889 4.860000e-21 113.0
37 TraesCS7D01G225400 chr4D 98.438 64 1 0 1 64 324210355 324210292 4.860000e-21 113.0
38 TraesCS7D01G225400 chr4D 86.517 89 8 3 5104 5190 210457779 210457865 1.760000e-15 95.3
39 TraesCS7D01G225400 chr4D 100.000 35 0 0 5318 5352 28364777 28364743 1.380000e-06 65.8
40 TraesCS7D01G225400 chr4D 100.000 33 0 0 5318 5350 220324259 220324291 1.790000e-05 62.1
41 TraesCS7D01G225400 chr6D 98.196 388 1 5 120 503 250673606 250673991 0.000000e+00 673.0
42 TraesCS7D01G225400 chr6D 98.196 388 2 5 120 503 382127457 382127071 0.000000e+00 673.0
43 TraesCS7D01G225400 chr6D 97.938 388 3 4 120 503 47588581 47588967 0.000000e+00 667.0
44 TraesCS7D01G225400 chr6D 94.262 122 4 2 4241 4362 79857222 79857104 3.660000e-42 183.0
45 TraesCS7D01G225400 chr6D 95.536 112 4 1 4252 4362 68899897 68900008 1.700000e-40 178.0
46 TraesCS7D01G225400 chr6D 95.283 106 5 0 4257 4362 303444618 303444723 1.020000e-37 169.0
47 TraesCS7D01G225400 chr6D 98.571 70 0 1 3021 3089 85799992 85800061 8.080000e-24 122.0
48 TraesCS7D01G225400 chr6D 89.247 93 7 1 63 152 132102648 132102556 4.860000e-21 113.0
49 TraesCS7D01G225400 chr6D 98.438 64 1 0 1 64 132102650 132102587 4.860000e-21 113.0
50 TraesCS7D01G225400 chr6D 89.247 93 7 1 63 152 250673704 250673612 4.860000e-21 113.0
51 TraesCS7D01G225400 chr6D 98.438 64 1 0 1 64 250673706 250673643 4.860000e-21 113.0
52 TraesCS7D01G225400 chr6D 97.297 37 1 0 5318 5354 24577207 24577243 4.970000e-06 63.9
53 TraesCS7D01G225400 chr6D 100.000 33 0 0 5318 5350 21979767 21979799 1.790000e-05 62.1
54 TraesCS7D01G225400 chr6D 100.000 33 0 0 5318 5350 352858020 352857988 1.790000e-05 62.1
55 TraesCS7D01G225400 chr6D 97.143 35 1 0 5318 5352 296747958 296747924 6.430000e-05 60.2
56 TraesCS7D01G225400 chr6D 97.143 35 1 0 5318 5352 400078416 400078382 6.430000e-05 60.2
57 TraesCS7D01G225400 chr6D 100.000 32 0 0 5319 5350 449179902 449179933 6.430000e-05 60.2
58 TraesCS7D01G225400 chr6D 100.000 30 0 0 5318 5347 89704482 89704453 8.310000e-04 56.5
59 TraesCS7D01G225400 chr3D 98.196 388 2 4 120 503 266540077 266539691 0.000000e+00 673.0
60 TraesCS7D01G225400 chr3D 98.286 175 2 1 2029 2202 42893222 42893048 7.480000e-79 305.0
61 TraesCS7D01G225400 chr3D 99.398 166 1 0 2029 2194 46649415 46649580 9.670000e-78 302.0
62 TraesCS7D01G225400 chr3D 96.703 182 4 2 2011 2192 433194097 433193918 9.670000e-78 302.0
63 TraesCS7D01G225400 chr3D 97.590 166 4 0 2028 2193 484729140 484729305 9.740000e-73 285.0
64 TraesCS7D01G225400 chr3D 92.000 125 8 2 4255 4377 55744976 55745100 2.200000e-39 174.0
65 TraesCS7D01G225400 chr3D 97.222 72 2 0 3018 3089 313292351 313292422 8.080000e-24 122.0
66 TraesCS7D01G225400 chr3D 93.827 81 3 2 3010 3089 124509998 124510077 2.910000e-23 121.0
67 TraesCS7D01G225400 chr3D 88.660 97 7 2 59 152 266539976 266540071 1.350000e-21 115.0
68 TraesCS7D01G225400 chr3D 84.821 112 14 2 5088 5196 375212371 375212260 6.290000e-20 110.0
69 TraesCS7D01G225400 chr3D 86.957 92 10 1 63 152 148067424 148067333 1.050000e-17 102.0
70 TraesCS7D01G225400 chr3D 100.000 36 0 0 5318 5353 581086819 581086784 3.840000e-07 67.6
71 TraesCS7D01G225400 chr3D 100.000 34 0 0 5412 5445 19326711 19326744 4.970000e-06 63.9
72 TraesCS7D01G225400 chr2D 97.949 390 2 5 120 505 328651613 328651226 0.000000e+00 671.0
73 TraesCS7D01G225400 chr2D 96.111 180 7 0 2021 2200 411726181 411726360 1.620000e-75 294.0
74 TraesCS7D01G225400 chr2D 98.182 110 2 0 4255 4364 73968057 73968166 6.070000e-45 193.0
75 TraesCS7D01G225400 chr2D 97.297 74 1 1 3017 3089 527391349 527391276 2.250000e-24 124.0
76 TraesCS7D01G225400 chr1D 96.742 399 7 5 109 503 257178357 257177961 0.000000e+00 660.0
77 TraesCS7D01G225400 chr1D 97.143 175 3 2 2029 2202 115018595 115018768 1.620000e-75 294.0
78 TraesCS7D01G225400 chr1D 94.017 117 6 1 4255 4370 41754355 41754471 6.120000e-40 176.0
79 TraesCS7D01G225400 chr1D 93.636 110 5 2 4254 4362 3303377 3303485 4.760000e-36 163.0
80 TraesCS7D01G225400 chr1D 96.000 75 1 2 3017 3089 114009682 114009756 2.910000e-23 121.0
81 TraesCS7D01G225400 chr1D 97.143 70 2 0 3020 3089 160525075 160525144 1.050000e-22 119.0
82 TraesCS7D01G225400 chr1D 98.507 67 1 0 3023 3089 400931962 400931896 1.050000e-22 119.0
83 TraesCS7D01G225400 chr1D 97.143 70 1 1 3020 3089 467242800 467242868 3.760000e-22 117.0
84 TraesCS7D01G225400 chr1D 95.833 72 2 1 3019 3089 139539372 139539301 1.350000e-21 115.0
85 TraesCS7D01G225400 chr1D 100.000 61 0 0 1 61 257178246 257178306 4.860000e-21 113.0
86 TraesCS7D01G225400 chr1D 89.247 93 7 1 63 152 257178248 257178340 4.860000e-21 113.0
87 TraesCS7D01G225400 chr1D 100.000 61 0 0 1 61 307997557 307997617 4.860000e-21 113.0
88 TraesCS7D01G225400 chr1D 98.438 64 1 0 1 64 440870343 440870280 4.860000e-21 113.0
89 TraesCS7D01G225400 chr1D 97.436 39 1 0 5318 5356 31688081 31688119 3.840000e-07 67.6
90 TraesCS7D01G225400 chr1D 100.000 35 0 0 5318 5352 6259027 6258993 1.380000e-06 65.8
91 TraesCS7D01G225400 chr1D 100.000 35 0 0 5318 5352 383175958 383175992 1.380000e-06 65.8
92 TraesCS7D01G225400 chr1D 97.222 36 1 0 5318 5353 18678393 18678428 1.790000e-05 62.1
93 TraesCS7D01G225400 chr1D 97.143 35 0 1 5412 5446 319929616 319929583 2.310000e-04 58.4
94 TraesCS7D01G225400 chr1D 100.000 30 0 0 5416 5445 276500527 276500556 8.310000e-04 56.5
95 TraesCS7D01G225400 chr2A 98.230 113 2 0 4255 4367 746800122 746800234 1.310000e-46 198.0
96 TraesCS7D01G225400 chr2A 93.243 74 4 1 1 74 690961323 690961395 2.260000e-19 108.0
97 TraesCS7D01G225400 chr4B 94.872 117 5 1 4255 4371 315065479 315065364 1.310000e-41 182.0
98 TraesCS7D01G225400 chr4B 93.162 117 8 0 4247 4363 134337036 134336920 7.910000e-39 172.0
99 TraesCS7D01G225400 chr4B 91.803 122 10 0 4255 4376 117056929 117057050 2.850000e-38 171.0
100 TraesCS7D01G225400 chr4B 100.000 66 0 0 3024 3089 315725415 315725350 8.080000e-24 122.0
101 TraesCS7D01G225400 chr4B 97.222 72 2 0 3018 3089 527938884 527938813 8.080000e-24 122.0
102 TraesCS7D01G225400 chr4B 96.000 75 2 1 3016 3089 31518909 31518983 2.910000e-23 121.0
103 TraesCS7D01G225400 chr4B 94.737 76 1 2 3014 3089 309650980 309650908 1.350000e-21 115.0
104 TraesCS7D01G225400 chr4B 93.590 78 4 1 3013 3089 564985103 564985026 1.350000e-21 115.0
105 TraesCS7D01G225400 chr4B 87.879 99 6 5 5093 5189 30730987 30731081 1.750000e-20 111.0
106 TraesCS7D01G225400 chr4B 87.640 89 7 3 5104 5190 253703936 253704022 3.790000e-17 100.0
107 TraesCS7D01G225400 chr4B 100.000 35 0 0 5318 5352 509006934 509006900 1.380000e-06 65.8
108 TraesCS7D01G225400 chr4B 100.000 35 0 0 5318 5352 662457967 662458001 1.380000e-06 65.8
109 TraesCS7D01G225400 chr4B 96.970 33 1 0 5099 5131 476365100 476365132 8.310000e-04 56.5
110 TraesCS7D01G225400 chr1B 95.614 114 4 1 4255 4367 445431939 445432052 1.310000e-41 182.0
111 TraesCS7D01G225400 chr1B 86.667 90 12 0 63 152 569769387 569769298 3.790000e-17 100.0
112 TraesCS7D01G225400 chr1A 95.614 114 4 1 4255 4367 427816356 427816469 1.310000e-41 182.0
113 TraesCS7D01G225400 chr1A 93.966 116 7 0 4255 4370 313736108 313736223 6.120000e-40 176.0
114 TraesCS7D01G225400 chr1A 95.370 108 5 0 4255 4362 115437282 115437175 7.910000e-39 172.0
115 TraesCS7D01G225400 chr1A 98.551 69 1 0 3021 3089 491268000 491267932 8.080000e-24 122.0
116 TraesCS7D01G225400 chr1A 97.143 70 2 0 3020 3089 37807735 37807666 1.050000e-22 119.0
117 TraesCS7D01G225400 chr1A 97.143 70 2 0 3020 3089 49248682 49248751 1.050000e-22 119.0
118 TraesCS7D01G225400 chr1A 97.183 71 1 1 3020 3089 464809067 464808997 1.050000e-22 119.0
119 TraesCS7D01G225400 chr1A 97.143 35 1 0 5411 5445 482792515 482792481 6.430000e-05 60.2
120 TraesCS7D01G225400 chr1A 100.000 30 0 0 5416 5445 348691847 348691876 8.310000e-04 56.5
121 TraesCS7D01G225400 chr5A 95.536 112 5 0 4251 4362 3409335 3409224 4.730000e-41 180.0
122 TraesCS7D01G225400 chr5A 93.277 119 8 0 4252 4370 36493457 36493575 6.120000e-40 176.0
123 TraesCS7D01G225400 chr5A 98.571 70 0 1 3020 3089 709391463 709391531 8.080000e-24 122.0
124 TraesCS7D01G225400 chr5A 100.000 34 0 0 5412 5445 599452286 599452253 4.970000e-06 63.9
125 TraesCS7D01G225400 chrUn 94.393 107 6 0 4260 4366 267455466 267455572 1.320000e-36 165.0
126 TraesCS7D01G225400 chrUn 92.593 108 8 0 4255 4362 25997014 25997121 7.970000e-34 156.0
127 TraesCS7D01G225400 chrUn 92.593 108 8 0 4255 4362 26076406 26076513 7.970000e-34 156.0
128 TraesCS7D01G225400 chrUn 92.593 108 8 0 4255 4362 26108961 26109068 7.970000e-34 156.0
129 TraesCS7D01G225400 chrUn 92.593 108 8 0 4255 4362 183929911 183929804 7.970000e-34 156.0
130 TraesCS7D01G225400 chrUn 92.593 108 8 0 4255 4362 210968594 210968701 7.970000e-34 156.0
131 TraesCS7D01G225400 chrUn 92.593 108 8 0 4255 4362 226923870 226923763 7.970000e-34 156.0
132 TraesCS7D01G225400 chrUn 92.593 108 8 0 4255 4362 253004763 253004870 7.970000e-34 156.0
133 TraesCS7D01G225400 chrUn 92.593 108 8 0 4255 4362 255745535 255745428 7.970000e-34 156.0
134 TraesCS7D01G225400 chrUn 98.551 69 1 0 3021 3089 42331973 42332041 8.080000e-24 122.0
135 TraesCS7D01G225400 chrUn 95.946 74 3 0 3016 3089 1035681 1035754 2.910000e-23 121.0
136 TraesCS7D01G225400 chrUn 98.507 67 1 0 3023 3089 468867871 468867937 1.050000e-22 119.0
137 TraesCS7D01G225400 chrUn 100.000 63 0 0 3027 3089 11913542 11913480 3.760000e-22 117.0
138 TraesCS7D01G225400 chrUn 100.000 63 0 0 3027 3089 12159873 12159811 3.760000e-22 117.0
139 TraesCS7D01G225400 chrUn 97.101 69 2 0 3021 3089 17582092 17582160 3.760000e-22 117.0
140 TraesCS7D01G225400 chrUn 98.485 66 1 0 3024 3089 27366602 27366667 3.760000e-22 117.0
141 TraesCS7D01G225400 chrUn 100.000 63 0 0 3027 3089 49493993 49493931 3.760000e-22 117.0
142 TraesCS7D01G225400 chrUn 97.101 69 2 0 3021 3089 86972278 86972346 3.760000e-22 117.0
143 TraesCS7D01G225400 chrUn 97.101 69 2 0 3021 3089 349855635 349855703 3.760000e-22 117.0
144 TraesCS7D01G225400 chrUn 100.000 63 0 0 3027 3089 356902575 356902513 3.760000e-22 117.0
145 TraesCS7D01G225400 chrUn 100.000 32 0 0 5318 5349 173753312 173753343 6.430000e-05 60.2
146 TraesCS7D01G225400 chrUn 100.000 31 0 0 5318 5348 91767542 91767512 2.310000e-04 58.4
147 TraesCS7D01G225400 chr3A 91.509 106 5 2 2765 2869 724270521 724270623 6.200000e-30 143.0
148 TraesCS7D01G225400 chr3A 94.366 71 3 1 1 71 731781415 731781346 2.260000e-19 108.0
149 TraesCS7D01G225400 chr3A 100.000 33 0 0 5412 5444 147793464 147793432 1.790000e-05 62.1
150 TraesCS7D01G225400 chr5B 94.872 78 2 2 3014 3089 237139883 237139806 2.910000e-23 121.0
151 TraesCS7D01G225400 chr5B 100.000 36 0 0 5410 5445 382897330 382897295 3.840000e-07 67.6
152 TraesCS7D01G225400 chr6A 92.857 84 3 3 3008 3089 104522002 104521920 1.050000e-22 119.0
153 TraesCS7D01G225400 chr6A 100.000 36 0 0 5410 5445 106983972 106983937 3.840000e-07 67.6
154 TraesCS7D01G225400 chr6A 97.368 38 1 0 5318 5355 76010141 76010104 1.380000e-06 65.8
155 TraesCS7D01G225400 chr6A 100.000 28 0 0 5148 5175 74025571 74025544 1.100000e-02 52.8
156 TraesCS7D01G225400 chr2B 100.000 63 0 0 3027 3089 70040955 70040893 3.760000e-22 117.0
157 TraesCS7D01G225400 chr2B 88.043 92 8 2 63 151 301383004 301382913 8.140000e-19 106.0
158 TraesCS7D01G225400 chr3B 84.821 112 14 2 5088 5196 489362948 489362837 6.290000e-20 110.0
159 TraesCS7D01G225400 chr3B 100.000 34 0 0 5412 5445 190473153 190473120 4.970000e-06 63.9
160 TraesCS7D01G225400 chr3B 97.059 34 1 0 5412 5445 31079873 31079906 2.310000e-04 58.4
161 TraesCS7D01G225400 chr6B 86.842 76 3 5 2797 2872 297533168 297533236 1.770000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G225400 chr7D 185176479 185182417 5938 True 5307.000000 10078 100.000000 1 5939 2 chr7D.!!$R5 5938
1 TraesCS7D01G225400 chr7B 327452260 327457502 5242 True 1074.571429 2006 93.917000 556 5937 7 chr7B.!!$R3 5381
2 TraesCS7D01G225400 chr7A 192880786 192882901 2115 True 890.333333 1304 93.272333 3305 5457 3 chr7A.!!$R2 2152
3 TraesCS7D01G225400 chr7A 192889457 192892176 2719 True 571.750000 1171 90.258750 515 3028 4 chr7A.!!$R3 2513

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
123 124 0.831307 AAATAGAGAGGGGGTGTCGC 59.169 55.000 0.00 0.00 0.00 5.19 F
1421 2207 0.038159 GCCTCGATCCTGGTAATCGG 60.038 60.000 15.26 8.03 44.67 4.18 F
1637 2452 0.164002 GCTCAAGAAACGCGACCTTC 59.836 55.000 15.93 12.58 0.00 3.46 F
2042 2859 1.067071 CACAGTTACTCCCTCCGTTCC 60.067 57.143 0.00 0.00 0.00 3.62 F
2043 2860 1.203149 ACAGTTACTCCCTCCGTTCCT 60.203 52.381 0.00 0.00 0.00 3.36 F
2044 2861 2.042162 ACAGTTACTCCCTCCGTTCCTA 59.958 50.000 0.00 0.00 0.00 2.94 F
3085 3937 0.714180 TTGGGGTAGGCTAGAGGTGA 59.286 55.000 0.00 0.00 0.00 4.02 F
3086 3938 0.714180 TGGGGTAGGCTAGAGGTGAA 59.286 55.000 0.00 0.00 0.00 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1593 2379 0.036952 ACTCACACGATCCAAGCCAG 60.037 55.000 0.00 0.0 0.0 4.85 R
3066 3918 0.714180 TCACCTCTAGCCTACCCCAA 59.286 55.000 0.00 0.0 0.0 4.12 R
3067 3919 0.714180 TTCACCTCTAGCCTACCCCA 59.286 55.000 0.00 0.0 0.0 4.96 R
3068 3920 1.485480 GTTTCACCTCTAGCCTACCCC 59.515 57.143 0.00 0.0 0.0 4.95 R
3069 3921 2.185387 TGTTTCACCTCTAGCCTACCC 58.815 52.381 0.00 0.0 0.0 3.69 R
3314 4166 2.530151 AGGAGCCTGACCAAGCCA 60.530 61.111 0.00 0.0 0.0 4.75 R
4759 5663 0.378257 GGCATGCATACGGTGTTCAG 59.622 55.000 21.36 0.0 0.0 3.02 R
4989 5893 0.468226 AGTGTTGTCTCTTCCCGCAA 59.532 50.000 0.00 0.0 0.0 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 6.966340 TTACAAAACGTAAAAATACGGTGC 57.034 33.333 12.37 0.00 43.24 5.01
34 35 4.918037 ACAAAACGTAAAAATACGGTGCA 58.082 34.783 12.37 0.00 43.24 4.57
35 36 5.521544 ACAAAACGTAAAAATACGGTGCAT 58.478 33.333 12.37 0.00 43.24 3.96
36 37 5.978322 ACAAAACGTAAAAATACGGTGCATT 59.022 32.000 12.37 0.00 43.24 3.56
37 38 6.074782 ACAAAACGTAAAAATACGGTGCATTG 60.075 34.615 12.37 9.64 43.24 2.82
38 39 5.359716 AACGTAAAAATACGGTGCATTGA 57.640 34.783 12.37 0.00 46.68 2.57
39 40 5.554822 ACGTAAAAATACGGTGCATTGAT 57.445 34.783 12.37 0.00 46.68 2.57
40 41 5.328691 ACGTAAAAATACGGTGCATTGATG 58.671 37.500 12.37 0.00 46.68 3.07
41 42 5.106475 ACGTAAAAATACGGTGCATTGATGT 60.106 36.000 12.37 0.00 46.68 3.06
42 43 5.451023 CGTAAAAATACGGTGCATTGATGTC 59.549 40.000 0.00 0.00 39.56 3.06
43 44 5.384063 AAAAATACGGTGCATTGATGTCA 57.616 34.783 0.00 0.00 0.00 3.58
44 45 5.384063 AAAATACGGTGCATTGATGTCAA 57.616 34.783 0.00 0.00 40.51 3.18
45 46 5.384063 AAATACGGTGCATTGATGTCAAA 57.616 34.783 0.00 0.00 39.55 2.69
46 47 5.384063 AATACGGTGCATTGATGTCAAAA 57.616 34.783 0.00 0.00 39.55 2.44
47 48 3.940209 ACGGTGCATTGATGTCAAAAT 57.060 38.095 0.00 0.00 39.55 1.82
48 49 6.691754 ATACGGTGCATTGATGTCAAAATA 57.308 33.333 0.00 0.00 39.55 1.40
49 50 4.985413 ACGGTGCATTGATGTCAAAATAG 58.015 39.130 0.00 0.00 39.55 1.73
50 51 4.699735 ACGGTGCATTGATGTCAAAATAGA 59.300 37.500 0.00 0.00 39.55 1.98
51 52 5.163723 ACGGTGCATTGATGTCAAAATAGAG 60.164 40.000 0.00 0.00 39.55 2.43
52 53 5.065090 CGGTGCATTGATGTCAAAATAGAGA 59.935 40.000 0.00 0.00 39.55 3.10
53 54 6.493116 GGTGCATTGATGTCAAAATAGAGAG 58.507 40.000 0.00 0.00 39.55 3.20
54 55 6.459298 GGTGCATTGATGTCAAAATAGAGAGG 60.459 42.308 0.00 0.00 39.55 3.69
55 56 5.591472 TGCATTGATGTCAAAATAGAGAGGG 59.409 40.000 0.00 0.00 39.55 4.30
56 57 5.009410 GCATTGATGTCAAAATAGAGAGGGG 59.991 44.000 0.00 0.00 39.55 4.79
57 58 4.778213 TGATGTCAAAATAGAGAGGGGG 57.222 45.455 0.00 0.00 0.00 5.40
58 59 4.111577 TGATGTCAAAATAGAGAGGGGGT 58.888 43.478 0.00 0.00 0.00 4.95
59 60 4.080356 TGATGTCAAAATAGAGAGGGGGTG 60.080 45.833 0.00 0.00 0.00 4.61
60 61 3.526899 TGTCAAAATAGAGAGGGGGTGA 58.473 45.455 0.00 0.00 0.00 4.02
61 62 4.111577 TGTCAAAATAGAGAGGGGGTGAT 58.888 43.478 0.00 0.00 0.00 3.06
62 63 4.080356 TGTCAAAATAGAGAGGGGGTGATG 60.080 45.833 0.00 0.00 0.00 3.07
63 64 4.164221 GTCAAAATAGAGAGGGGGTGATGA 59.836 45.833 0.00 0.00 0.00 2.92
64 65 4.164221 TCAAAATAGAGAGGGGGTGATGAC 59.836 45.833 0.00 0.00 0.00 3.06
65 66 3.421394 AATAGAGAGGGGGTGATGACA 57.579 47.619 0.00 0.00 0.00 3.58
66 67 2.940514 TAGAGAGGGGGTGATGACAA 57.059 50.000 0.00 0.00 0.00 3.18
67 68 2.044793 AGAGAGGGGGTGATGACAAA 57.955 50.000 0.00 0.00 0.00 2.83
68 69 2.348472 AGAGAGGGGGTGATGACAAAA 58.652 47.619 0.00 0.00 0.00 2.44
69 70 2.922283 AGAGAGGGGGTGATGACAAAAT 59.078 45.455 0.00 0.00 0.00 1.82
70 71 3.334881 AGAGAGGGGGTGATGACAAAATT 59.665 43.478 0.00 0.00 0.00 1.82
71 72 4.089361 GAGAGGGGGTGATGACAAAATTT 58.911 43.478 0.00 0.00 0.00 1.82
72 73 5.015178 AGAGAGGGGGTGATGACAAAATTTA 59.985 40.000 0.00 0.00 0.00 1.40
73 74 5.016831 AGAGGGGGTGATGACAAAATTTAC 58.983 41.667 0.00 0.00 0.00 2.01
74 75 4.746466 AGGGGGTGATGACAAAATTTACA 58.254 39.130 0.00 0.00 0.00 2.41
75 76 5.151454 AGGGGGTGATGACAAAATTTACAA 58.849 37.500 0.00 0.00 0.00 2.41
76 77 5.604650 AGGGGGTGATGACAAAATTTACAAA 59.395 36.000 0.00 0.00 0.00 2.83
77 78 6.100424 AGGGGGTGATGACAAAATTTACAAAA 59.900 34.615 0.00 0.00 0.00 2.44
78 79 6.203915 GGGGGTGATGACAAAATTTACAAAAC 59.796 38.462 0.00 0.00 0.00 2.43
79 80 6.074034 GGGGTGATGACAAAATTTACAAAACG 60.074 38.462 0.00 0.00 0.00 3.60
80 81 6.477360 GGGTGATGACAAAATTTACAAAACGT 59.523 34.615 0.00 0.00 0.00 3.99
81 82 7.648510 GGGTGATGACAAAATTTACAAAACGTA 59.351 33.333 0.00 0.00 0.00 3.57
82 83 9.021863 GGTGATGACAAAATTTACAAAACGTAA 57.978 29.630 0.00 0.00 38.33 3.18
93 94 6.966340 TTACAAAACGTAAAAATACGGTGC 57.034 33.333 12.37 0.00 43.24 5.01
94 95 4.918037 ACAAAACGTAAAAATACGGTGCA 58.082 34.783 12.37 0.00 43.24 4.57
95 96 5.521544 ACAAAACGTAAAAATACGGTGCAT 58.478 33.333 12.37 0.00 43.24 3.96
96 97 5.978322 ACAAAACGTAAAAATACGGTGCATT 59.022 32.000 12.37 0.00 43.24 3.56
97 98 6.074782 ACAAAACGTAAAAATACGGTGCATTG 60.075 34.615 12.37 9.64 43.24 2.82
98 99 5.359716 AACGTAAAAATACGGTGCATTGA 57.640 34.783 12.37 0.00 46.68 2.57
99 100 5.554822 ACGTAAAAATACGGTGCATTGAT 57.445 34.783 12.37 0.00 46.68 2.57
100 101 5.328691 ACGTAAAAATACGGTGCATTGATG 58.671 37.500 12.37 0.00 46.68 3.07
101 102 5.106475 ACGTAAAAATACGGTGCATTGATGT 60.106 36.000 12.37 0.00 46.68 3.06
102 103 5.451023 CGTAAAAATACGGTGCATTGATGTC 59.549 40.000 0.00 0.00 39.56 3.06
103 104 5.384063 AAAAATACGGTGCATTGATGTCA 57.616 34.783 0.00 0.00 0.00 3.58
104 105 5.384063 AAAATACGGTGCATTGATGTCAA 57.616 34.783 0.00 0.00 40.51 3.18
105 106 5.384063 AAATACGGTGCATTGATGTCAAA 57.616 34.783 0.00 0.00 39.55 2.69
106 107 5.384063 AATACGGTGCATTGATGTCAAAA 57.616 34.783 0.00 0.00 39.55 2.44
107 108 3.940209 ACGGTGCATTGATGTCAAAAT 57.060 38.095 0.00 0.00 39.55 1.82
108 109 6.691754 ATACGGTGCATTGATGTCAAAATA 57.308 33.333 0.00 0.00 39.55 1.40
109 110 4.985413 ACGGTGCATTGATGTCAAAATAG 58.015 39.130 0.00 0.00 39.55 1.73
110 111 4.699735 ACGGTGCATTGATGTCAAAATAGA 59.300 37.500 0.00 0.00 39.55 1.98
111 112 5.163723 ACGGTGCATTGATGTCAAAATAGAG 60.164 40.000 0.00 0.00 39.55 2.43
112 113 5.065090 CGGTGCATTGATGTCAAAATAGAGA 59.935 40.000 0.00 0.00 39.55 3.10
113 114 6.493116 GGTGCATTGATGTCAAAATAGAGAG 58.507 40.000 0.00 0.00 39.55 3.20
114 115 6.459298 GGTGCATTGATGTCAAAATAGAGAGG 60.459 42.308 0.00 0.00 39.55 3.69
115 116 5.591472 TGCATTGATGTCAAAATAGAGAGGG 59.409 40.000 0.00 0.00 39.55 4.30
116 117 5.009410 GCATTGATGTCAAAATAGAGAGGGG 59.991 44.000 0.00 0.00 39.55 4.79
117 118 4.778213 TGATGTCAAAATAGAGAGGGGG 57.222 45.455 0.00 0.00 0.00 5.40
118 119 4.111577 TGATGTCAAAATAGAGAGGGGGT 58.888 43.478 0.00 0.00 0.00 4.95
119 120 4.080356 TGATGTCAAAATAGAGAGGGGGTG 60.080 45.833 0.00 0.00 0.00 4.61
120 121 3.256704 TGTCAAAATAGAGAGGGGGTGT 58.743 45.455 0.00 0.00 0.00 4.16
121 122 3.263425 TGTCAAAATAGAGAGGGGGTGTC 59.737 47.826 0.00 0.00 0.00 3.67
122 123 2.500098 TCAAAATAGAGAGGGGGTGTCG 59.500 50.000 0.00 0.00 0.00 4.35
123 124 0.831307 AAATAGAGAGGGGGTGTCGC 59.169 55.000 0.00 0.00 0.00 5.19
124 125 1.392710 AATAGAGAGGGGGTGTCGCG 61.393 60.000 0.00 0.00 0.00 5.87
127 128 4.753662 AGAGGGGGTGTCGCGCTA 62.754 66.667 5.56 0.00 39.43 4.26
128 129 3.537874 GAGGGGGTGTCGCGCTAT 61.538 66.667 5.56 0.00 39.43 2.97
129 130 3.081409 AGGGGGTGTCGCGCTATT 61.081 61.111 5.56 0.00 37.77 1.73
130 131 2.588034 GGGGGTGTCGCGCTATTC 60.588 66.667 5.56 0.00 0.00 1.75
131 132 2.960129 GGGGTGTCGCGCTATTCG 60.960 66.667 5.56 0.00 42.12 3.34
132 133 2.202703 GGGTGTCGCGCTATTCGT 60.203 61.111 5.56 0.00 41.07 3.85
133 134 2.228914 GGGTGTCGCGCTATTCGTC 61.229 63.158 5.56 0.00 41.07 4.20
134 135 1.515519 GGTGTCGCGCTATTCGTCA 60.516 57.895 5.56 0.00 41.07 4.35
135 136 1.624323 GTGTCGCGCTATTCGTCAC 59.376 57.895 5.56 0.00 41.07 3.67
136 137 1.515519 TGTCGCGCTATTCGTCACC 60.516 57.895 5.56 0.00 41.07 4.02
137 138 2.103538 TCGCGCTATTCGTCACCC 59.896 61.111 5.56 0.00 41.07 4.61
138 139 2.104331 CGCGCTATTCGTCACCCT 59.896 61.111 5.56 0.00 41.07 4.34
139 140 2.230940 CGCGCTATTCGTCACCCTG 61.231 63.158 5.56 0.00 41.07 4.45
140 141 1.883084 GCGCTATTCGTCACCCTGG 60.883 63.158 0.00 0.00 41.07 4.45
141 142 1.227263 CGCTATTCGTCACCCTGGG 60.227 63.158 12.28 12.28 0.00 4.45
142 143 1.905512 GCTATTCGTCACCCTGGGT 59.094 57.895 14.05 14.05 35.62 4.51
153 154 2.361085 ACCCTGGGTGAGGAATAGTT 57.639 50.000 19.82 0.00 46.33 2.24
154 155 3.502051 ACCCTGGGTGAGGAATAGTTA 57.498 47.619 19.82 0.00 46.33 2.24
155 156 4.022359 ACCCTGGGTGAGGAATAGTTAT 57.978 45.455 19.82 0.00 46.33 1.89
156 157 4.380791 ACCCTGGGTGAGGAATAGTTATT 58.619 43.478 19.82 0.00 46.33 1.40
157 158 4.412528 ACCCTGGGTGAGGAATAGTTATTC 59.587 45.833 19.82 3.75 46.33 1.75
158 159 4.660771 CCCTGGGTGAGGAATAGTTATTCT 59.339 45.833 3.97 0.00 46.33 2.40
159 160 5.132816 CCCTGGGTGAGGAATAGTTATTCTT 59.867 44.000 3.97 4.41 46.33 2.52
160 161 6.292150 CCTGGGTGAGGAATAGTTATTCTTC 58.708 44.000 13.90 13.90 46.33 2.87
165 166 6.248569 TGAGGAATAGTTATTCTTCACCCC 57.751 41.667 17.60 0.81 46.85 4.95
166 167 5.132144 TGAGGAATAGTTATTCTTCACCCCC 59.868 44.000 17.60 0.23 46.85 5.40
167 168 5.297799 AGGAATAGTTATTCTTCACCCCCT 58.702 41.667 10.71 0.00 41.33 4.79
168 169 5.369993 AGGAATAGTTATTCTTCACCCCCTC 59.630 44.000 10.71 0.00 41.33 4.30
169 170 5.369993 GGAATAGTTATTCTTCACCCCCTCT 59.630 44.000 10.71 0.00 41.33 3.69
170 171 6.557633 GGAATAGTTATTCTTCACCCCCTCTA 59.442 42.308 10.71 0.00 41.33 2.43
171 172 7.237887 GGAATAGTTATTCTTCACCCCCTCTAT 59.762 40.741 10.71 0.00 41.33 1.98
172 173 8.582891 AATAGTTATTCTTCACCCCCTCTATT 57.417 34.615 0.00 0.00 0.00 1.73
173 174 6.910259 AGTTATTCTTCACCCCCTCTATTT 57.090 37.500 0.00 0.00 0.00 1.40
174 175 7.285340 AGTTATTCTTCACCCCCTCTATTTT 57.715 36.000 0.00 0.00 0.00 1.82
175 176 7.119387 AGTTATTCTTCACCCCCTCTATTTTG 58.881 38.462 0.00 0.00 0.00 2.44
176 177 5.796502 ATTCTTCACCCCCTCTATTTTGA 57.203 39.130 0.00 0.00 0.00 2.69
177 178 4.569719 TCTTCACCCCCTCTATTTTGAC 57.430 45.455 0.00 0.00 0.00 3.18
178 179 3.913799 TCTTCACCCCCTCTATTTTGACA 59.086 43.478 0.00 0.00 0.00 3.58
179 180 4.540099 TCTTCACCCCCTCTATTTTGACAT 59.460 41.667 0.00 0.00 0.00 3.06
180 181 4.503714 TCACCCCCTCTATTTTGACATC 57.496 45.455 0.00 0.00 0.00 3.06
181 182 3.849574 TCACCCCCTCTATTTTGACATCA 59.150 43.478 0.00 0.00 0.00 3.07
182 183 4.290985 TCACCCCCTCTATTTTGACATCAA 59.709 41.667 0.00 0.00 0.00 2.57
183 184 5.044179 TCACCCCCTCTATTTTGACATCAAT 60.044 40.000 0.00 0.00 35.55 2.57
184 185 5.068198 CACCCCCTCTATTTTGACATCAATG 59.932 44.000 0.00 0.00 35.55 2.82
185 186 4.038402 CCCCCTCTATTTTGACATCAATGC 59.962 45.833 0.00 0.00 35.55 3.56
186 187 4.646040 CCCCTCTATTTTGACATCAATGCA 59.354 41.667 0.00 0.00 35.55 3.96
187 188 5.450965 CCCCTCTATTTTGACATCAATGCAC 60.451 44.000 0.00 0.00 35.55 4.57
188 189 5.450965 CCCTCTATTTTGACATCAATGCACC 60.451 44.000 0.00 0.00 35.55 5.01
189 190 5.233957 TCTATTTTGACATCAATGCACCG 57.766 39.130 0.00 0.00 35.55 4.94
190 191 3.940209 ATTTTGACATCAATGCACCGT 57.060 38.095 0.00 0.00 35.55 4.83
191 192 5.877564 TCTATTTTGACATCAATGCACCGTA 59.122 36.000 0.00 0.00 35.55 4.02
192 193 5.581126 ATTTTGACATCAATGCACCGTAT 57.419 34.783 0.00 0.00 35.55 3.06
193 194 5.384063 TTTTGACATCAATGCACCGTATT 57.616 34.783 0.00 0.00 35.55 1.89
194 195 5.384063 TTTGACATCAATGCACCGTATTT 57.616 34.783 0.00 0.00 35.55 1.40
195 196 5.384063 TTGACATCAATGCACCGTATTTT 57.616 34.783 0.00 0.00 0.00 1.82
196 197 5.384063 TGACATCAATGCACCGTATTTTT 57.616 34.783 0.00 0.00 0.00 1.94
197 198 6.502136 TGACATCAATGCACCGTATTTTTA 57.498 33.333 0.00 0.00 0.00 1.52
198 199 6.318628 TGACATCAATGCACCGTATTTTTAC 58.681 36.000 0.00 0.00 0.00 2.01
199 200 5.328691 ACATCAATGCACCGTATTTTTACG 58.671 37.500 0.00 0.00 42.56 3.18
200 201 5.106475 ACATCAATGCACCGTATTTTTACGT 60.106 36.000 0.00 0.00 41.46 3.57
201 202 5.359716 TCAATGCACCGTATTTTTACGTT 57.640 34.783 0.00 0.00 41.46 3.99
202 203 5.759963 TCAATGCACCGTATTTTTACGTTT 58.240 33.333 0.00 0.00 41.46 3.60
203 204 6.207213 TCAATGCACCGTATTTTTACGTTTT 58.793 32.000 0.00 0.00 41.46 2.43
204 205 6.142480 TCAATGCACCGTATTTTTACGTTTTG 59.858 34.615 0.00 1.26 41.46 2.44
205 206 4.918037 TGCACCGTATTTTTACGTTTTGT 58.082 34.783 0.00 0.00 41.46 2.83
206 207 6.052840 TGCACCGTATTTTTACGTTTTGTA 57.947 33.333 0.00 0.00 41.46 2.41
207 208 6.489675 TGCACCGTATTTTTACGTTTTGTAA 58.510 32.000 0.00 0.00 41.25 2.41
258 259 7.447243 AGAACGTAAGAAAATATGTACTCGC 57.553 36.000 0.00 0.00 43.62 5.03
259 260 6.474751 AGAACGTAAGAAAATATGTACTCGCC 59.525 38.462 0.00 0.00 43.62 5.54
260 261 4.736793 ACGTAAGAAAATATGTACTCGCCG 59.263 41.667 0.00 0.00 43.62 6.46
261 262 4.736793 CGTAAGAAAATATGTACTCGCCGT 59.263 41.667 0.00 0.00 43.02 5.68
262 263 5.909054 CGTAAGAAAATATGTACTCGCCGTA 59.091 40.000 0.00 0.00 43.02 4.02
263 264 6.414694 CGTAAGAAAATATGTACTCGCCGTAA 59.585 38.462 0.00 0.00 43.02 3.18
264 265 7.044117 CGTAAGAAAATATGTACTCGCCGTAAA 60.044 37.037 0.00 0.00 43.02 2.01
265 266 7.599630 AAGAAAATATGTACTCGCCGTAAAA 57.400 32.000 0.00 0.00 0.00 1.52
266 267 7.599630 AGAAAATATGTACTCGCCGTAAAAA 57.400 32.000 0.00 0.00 0.00 1.94
432 433 8.937634 ACGTAATTTATTTAGGAAGTGATCGT 57.062 30.769 0.00 0.00 31.57 3.73
449 450 3.003394 TCGTAAGATTACCTCGGGTGA 57.997 47.619 5.90 0.00 45.01 4.02
450 451 3.355378 TCGTAAGATTACCTCGGGTGAA 58.645 45.455 5.90 0.00 45.01 3.18
451 452 3.379372 TCGTAAGATTACCTCGGGTGAAG 59.621 47.826 5.90 0.00 45.01 3.02
452 453 3.379372 CGTAAGATTACCTCGGGTGAAGA 59.621 47.826 5.90 0.00 36.23 2.87
453 454 4.142315 CGTAAGATTACCTCGGGTGAAGAA 60.142 45.833 5.90 0.00 36.23 2.52
454 455 5.451520 CGTAAGATTACCTCGGGTGAAGAAT 60.452 44.000 5.90 0.00 36.23 2.40
455 456 6.238842 CGTAAGATTACCTCGGGTGAAGAATA 60.239 42.308 5.90 0.00 36.23 1.75
456 457 6.555463 AAGATTACCTCGGGTGAAGAATAA 57.445 37.500 5.90 0.00 36.19 1.40
457 458 5.915175 AGATTACCTCGGGTGAAGAATAAC 58.085 41.667 5.90 0.00 36.19 1.89
458 459 5.661759 AGATTACCTCGGGTGAAGAATAACT 59.338 40.000 5.90 0.00 36.19 2.24
459 460 5.750352 TTACCTCGGGTGAAGAATAACTT 57.250 39.130 5.90 0.00 38.14 2.66
460 461 6.855763 TTACCTCGGGTGAAGAATAACTTA 57.144 37.500 5.90 0.00 36.67 2.24
461 462 5.952347 ACCTCGGGTGAAGAATAACTTAT 57.048 39.130 0.00 0.00 39.13 1.73
462 463 6.309389 ACCTCGGGTGAAGAATAACTTATT 57.691 37.500 0.00 0.00 39.13 1.40
463 464 6.346896 ACCTCGGGTGAAGAATAACTTATTC 58.653 40.000 12.07 12.07 38.76 1.75
464 465 6.156429 ACCTCGGGTGAAGAATAACTTATTCT 59.844 38.462 15.62 15.62 44.74 2.40
465 466 7.848201 ACCTCGGGTGAAGAATAACTTATTCTG 60.848 40.741 20.22 10.00 43.39 3.02
474 475 6.566197 GAATAACTTATTCTGCATCCTGGG 57.434 41.667 12.55 0.00 41.00 4.45
475 476 5.653255 ATAACTTATTCTGCATCCTGGGT 57.347 39.130 0.00 0.00 0.00 4.51
476 477 3.287867 ACTTATTCTGCATCCTGGGTG 57.712 47.619 1.54 1.54 0.00 4.61
477 478 2.846206 ACTTATTCTGCATCCTGGGTGA 59.154 45.455 12.09 0.00 0.00 4.02
478 479 3.461085 ACTTATTCTGCATCCTGGGTGAT 59.539 43.478 12.09 0.00 0.00 3.06
479 480 2.359981 ATTCTGCATCCTGGGTGATG 57.640 50.000 12.09 2.06 44.02 3.07
480 481 1.288188 TTCTGCATCCTGGGTGATGA 58.712 50.000 12.09 4.66 43.94 2.92
481 482 1.288188 TCTGCATCCTGGGTGATGAA 58.712 50.000 12.09 0.00 43.94 2.57
482 483 1.848388 TCTGCATCCTGGGTGATGAAT 59.152 47.619 12.09 0.00 43.94 2.57
483 484 3.047857 TCTGCATCCTGGGTGATGAATA 58.952 45.455 12.09 0.00 43.94 1.75
484 485 3.072038 TCTGCATCCTGGGTGATGAATAG 59.928 47.826 12.09 0.00 43.94 1.73
485 486 2.779430 TGCATCCTGGGTGATGAATAGT 59.221 45.455 12.09 0.00 43.94 2.12
486 487 3.973305 TGCATCCTGGGTGATGAATAGTA 59.027 43.478 12.09 0.00 43.94 1.82
487 488 4.411869 TGCATCCTGGGTGATGAATAGTAA 59.588 41.667 12.09 0.00 43.94 2.24
488 489 4.757149 GCATCCTGGGTGATGAATAGTAAC 59.243 45.833 12.09 0.00 43.94 2.50
489 490 5.687441 GCATCCTGGGTGATGAATAGTAACA 60.687 44.000 12.09 0.00 43.94 2.41
490 491 5.353394 TCCTGGGTGATGAATAGTAACAC 57.647 43.478 0.00 0.00 0.00 3.32
491 492 5.030147 TCCTGGGTGATGAATAGTAACACT 58.970 41.667 0.00 0.00 0.00 3.55
492 493 6.199376 TCCTGGGTGATGAATAGTAACACTA 58.801 40.000 0.00 0.00 34.82 2.74
493 494 6.844388 TCCTGGGTGATGAATAGTAACACTAT 59.156 38.462 0.00 0.00 42.86 2.12
494 495 8.008332 TCCTGGGTGATGAATAGTAACACTATA 58.992 37.037 0.00 0.00 40.32 1.31
495 496 8.816894 CCTGGGTGATGAATAGTAACACTATAT 58.183 37.037 0.00 0.00 40.32 0.86
542 543 5.657474 TCTCATACGGTTTTATGGTGTCTC 58.343 41.667 0.00 0.00 31.33 3.36
616 618 8.837099 ATGGGGACTTGTTTGATATTTTATGA 57.163 30.769 0.00 0.00 0.00 2.15
743 1488 7.698836 AAAGAACCTCATGAATTTTGTTTCG 57.301 32.000 0.00 0.00 0.00 3.46
846 1621 5.477984 TCTGTTTTTGATAGCTGCAGGATTT 59.522 36.000 17.12 0.00 0.00 2.17
847 1622 6.658816 TCTGTTTTTGATAGCTGCAGGATTTA 59.341 34.615 17.12 0.00 0.00 1.40
848 1623 7.340232 TCTGTTTTTGATAGCTGCAGGATTTAT 59.660 33.333 17.12 0.00 0.00 1.40
849 1624 7.839907 TGTTTTTGATAGCTGCAGGATTTATT 58.160 30.769 17.12 0.00 0.00 1.40
850 1625 8.313292 TGTTTTTGATAGCTGCAGGATTTATTT 58.687 29.630 17.12 0.00 0.00 1.40
851 1626 9.154847 GTTTTTGATAGCTGCAGGATTTATTTT 57.845 29.630 17.12 0.00 0.00 1.82
852 1627 9.723601 TTTTTGATAGCTGCAGGATTTATTTTT 57.276 25.926 17.12 0.00 0.00 1.94
926 1708 2.515854 TGACTCAGAGTACACCAGACC 58.484 52.381 2.00 0.00 0.00 3.85
930 1712 1.228769 AGAGTACACCAGACCGCCA 60.229 57.895 0.00 0.00 0.00 5.69
1051 1837 4.095400 TCCTCCTCCTGCCCCTCC 62.095 72.222 0.00 0.00 0.00 4.30
1110 1896 2.733593 GCGGTGATCGGCGATACC 60.734 66.667 24.05 24.98 39.69 2.73
1282 2068 0.676782 GGGGGATGACTCCGTTGTTG 60.677 60.000 0.00 0.00 43.11 3.33
1421 2207 0.038159 GCCTCGATCCTGGTAATCGG 60.038 60.000 15.26 8.03 44.67 4.18
1436 2222 3.933861 AATCGGCTAATTTCCTCTGGT 57.066 42.857 0.00 0.00 0.00 4.00
1447 2233 1.224592 CCTCTGGTTATTGCGGGCT 59.775 57.895 0.00 0.00 0.00 5.19
1526 2312 2.455674 TCGGTGTGAACTCTGATTGG 57.544 50.000 0.00 0.00 0.00 3.16
1541 2327 3.443037 TGATTGGTTTGTTTTGACAGCG 58.557 40.909 0.00 0.00 0.00 5.18
1585 2371 5.423015 CACTAGCTTGACACCAGAACATAT 58.577 41.667 1.04 0.00 0.00 1.78
1588 2374 5.171339 AGCTTGACACCAGAACATATTCT 57.829 39.130 0.00 0.00 46.63 2.40
1590 2376 4.033358 GCTTGACACCAGAACATATTCTCG 59.967 45.833 0.00 0.00 43.69 4.04
1592 2378 2.866762 GACACCAGAACATATTCTCGCC 59.133 50.000 0.00 0.00 43.69 5.54
1593 2379 2.213499 CACCAGAACATATTCTCGCCC 58.787 52.381 0.00 0.00 43.69 6.13
1594 2380 2.119495 ACCAGAACATATTCTCGCCCT 58.881 47.619 0.00 0.00 43.69 5.19
1595 2381 2.158900 ACCAGAACATATTCTCGCCCTG 60.159 50.000 0.00 0.00 43.69 4.45
1596 2382 2.487934 CAGAACATATTCTCGCCCTGG 58.512 52.381 0.00 0.00 43.69 4.45
1597 2383 1.202698 AGAACATATTCTCGCCCTGGC 60.203 52.381 0.00 0.00 41.63 4.85
1598 2384 0.839946 AACATATTCTCGCCCTGGCT 59.160 50.000 6.60 0.00 39.32 4.75
1621 2436 0.388649 ATCGTGTGAGTTCGGTGCTC 60.389 55.000 0.00 0.00 0.00 4.26
1637 2452 0.164002 GCTCAAGAAACGCGACCTTC 59.836 55.000 15.93 12.58 0.00 3.46
1771 2586 7.986085 AACAGAAGTAGATTGCTTACACAAT 57.014 32.000 0.00 0.00 42.88 2.71
1791 2606 7.122501 ACACAATGAGTTTGCATATTCATGGTA 59.877 33.333 18.02 0.00 39.03 3.25
1947 2764 9.920133 TCTTGCTGTATGTTAATATTTTGCAAA 57.080 25.926 8.05 8.05 36.49 3.68
2003 2820 6.882610 AATTCTCAATCAGTTTACTGCACA 57.117 33.333 5.00 0.00 43.46 4.57
2028 2845 7.753309 TGGCAATTGTATTACTTACACAGTT 57.247 32.000 7.40 0.00 40.53 3.16
2029 2846 8.850007 TGGCAATTGTATTACTTACACAGTTA 57.150 30.769 7.40 0.00 40.53 2.24
2030 2847 8.723311 TGGCAATTGTATTACTTACACAGTTAC 58.277 33.333 7.40 0.00 40.53 2.50
2031 2848 8.943002 GGCAATTGTATTACTTACACAGTTACT 58.057 33.333 7.40 0.00 40.53 2.24
2032 2849 9.968743 GCAATTGTATTACTTACACAGTTACTC 57.031 33.333 7.40 0.00 40.53 2.59
2034 2851 9.662947 AATTGTATTACTTACACAGTTACTCCC 57.337 33.333 0.00 0.00 40.53 4.30
2035 2852 8.426569 TTGTATTACTTACACAGTTACTCCCT 57.573 34.615 0.00 0.00 40.53 4.20
2036 2853 8.059798 TGTATTACTTACACAGTTACTCCCTC 57.940 38.462 0.00 0.00 35.86 4.30
2037 2854 5.990120 TTACTTACACAGTTACTCCCTCC 57.010 43.478 0.00 0.00 36.88 4.30
2038 2855 2.824341 ACTTACACAGTTACTCCCTCCG 59.176 50.000 0.00 0.00 27.32 4.63
2039 2856 2.592102 TACACAGTTACTCCCTCCGT 57.408 50.000 0.00 0.00 0.00 4.69
2040 2857 1.713297 ACACAGTTACTCCCTCCGTT 58.287 50.000 0.00 0.00 0.00 4.44
2041 2858 1.617357 ACACAGTTACTCCCTCCGTTC 59.383 52.381 0.00 0.00 0.00 3.95
2042 2859 1.067071 CACAGTTACTCCCTCCGTTCC 60.067 57.143 0.00 0.00 0.00 3.62
2043 2860 1.203149 ACAGTTACTCCCTCCGTTCCT 60.203 52.381 0.00 0.00 0.00 3.36
2044 2861 2.042162 ACAGTTACTCCCTCCGTTCCTA 59.958 50.000 0.00 0.00 0.00 2.94
2045 2862 3.094572 CAGTTACTCCCTCCGTTCCTAA 58.905 50.000 0.00 0.00 0.00 2.69
2046 2863 3.512724 CAGTTACTCCCTCCGTTCCTAAA 59.487 47.826 0.00 0.00 0.00 1.85
2047 2864 4.161754 CAGTTACTCCCTCCGTTCCTAAAT 59.838 45.833 0.00 0.00 0.00 1.40
2048 2865 5.361857 CAGTTACTCCCTCCGTTCCTAAATA 59.638 44.000 0.00 0.00 0.00 1.40
2049 2866 5.362143 AGTTACTCCCTCCGTTCCTAAATAC 59.638 44.000 0.00 0.00 0.00 1.89
2050 2867 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
2051 2868 4.359996 ACTCCCTCCGTTCCTAAATACTT 58.640 43.478 0.00 0.00 0.00 2.24
2052 2869 4.161754 ACTCCCTCCGTTCCTAAATACTTG 59.838 45.833 0.00 0.00 0.00 3.16
2053 2870 4.098894 TCCCTCCGTTCCTAAATACTTGT 58.901 43.478 0.00 0.00 0.00 3.16
2054 2871 4.161001 TCCCTCCGTTCCTAAATACTTGTC 59.839 45.833 0.00 0.00 0.00 3.18
2055 2872 4.161754 CCCTCCGTTCCTAAATACTTGTCT 59.838 45.833 0.00 0.00 0.00 3.41
2056 2873 5.338137 CCCTCCGTTCCTAAATACTTGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
2057 2874 6.171213 CCTCCGTTCCTAAATACTTGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
2058 2875 6.313164 CCTCCGTTCCTAAATACTTGTCTTTC 59.687 42.308 0.00 0.00 0.00 2.62
2059 2876 7.001099 TCCGTTCCTAAATACTTGTCTTTCT 57.999 36.000 0.00 0.00 0.00 2.52
2060 2877 8.125978 TCCGTTCCTAAATACTTGTCTTTCTA 57.874 34.615 0.00 0.00 0.00 2.10
2061 2878 8.248945 TCCGTTCCTAAATACTTGTCTTTCTAG 58.751 37.037 0.00 0.00 0.00 2.43
2062 2879 7.491696 CCGTTCCTAAATACTTGTCTTTCTAGG 59.508 40.741 0.00 0.00 0.00 3.02
2063 2880 7.010275 CGTTCCTAAATACTTGTCTTTCTAGGC 59.990 40.741 0.00 0.00 0.00 3.93
2064 2881 7.490657 TCCTAAATACTTGTCTTTCTAGGCA 57.509 36.000 0.00 0.00 33.22 4.75
2065 2882 8.090788 TCCTAAATACTTGTCTTTCTAGGCAT 57.909 34.615 0.00 0.00 35.56 4.40
2066 2883 8.548877 TCCTAAATACTTGTCTTTCTAGGCATT 58.451 33.333 0.00 0.00 35.56 3.56
2067 2884 9.178758 CCTAAATACTTGTCTTTCTAGGCATTT 57.821 33.333 0.00 0.00 35.56 2.32
2069 2886 8.635765 AAATACTTGTCTTTCTAGGCATTTCA 57.364 30.769 0.00 0.00 35.56 2.69
2070 2887 8.635765 AATACTTGTCTTTCTAGGCATTTCAA 57.364 30.769 0.00 0.00 35.56 2.69
2071 2888 6.959639 ACTTGTCTTTCTAGGCATTTCAAA 57.040 33.333 0.00 0.00 35.56 2.69
2072 2889 7.530426 ACTTGTCTTTCTAGGCATTTCAAAT 57.470 32.000 0.00 0.00 35.56 2.32
2073 2890 7.373493 ACTTGTCTTTCTAGGCATTTCAAATG 58.627 34.615 5.68 5.68 35.56 2.32
2074 2891 7.231317 ACTTGTCTTTCTAGGCATTTCAAATGA 59.769 33.333 14.65 0.00 35.56 2.57
2075 2892 6.913170 TGTCTTTCTAGGCATTTCAAATGAC 58.087 36.000 14.65 11.48 29.10 3.06
2076 2893 6.716628 TGTCTTTCTAGGCATTTCAAATGACT 59.283 34.615 22.35 22.35 41.04 3.41
2077 2894 7.882791 TGTCTTTCTAGGCATTTCAAATGACTA 59.117 33.333 22.19 22.19 38.54 2.59
2078 2895 8.897752 GTCTTTCTAGGCATTTCAAATGACTAT 58.102 33.333 23.50 4.64 38.80 2.12
2079 2896 9.113838 TCTTTCTAGGCATTTCAAATGACTATC 57.886 33.333 23.50 1.52 38.80 2.08
2080 2897 8.806429 TTTCTAGGCATTTCAAATGACTATCA 57.194 30.769 23.50 12.23 38.80 2.15
2081 2898 7.792374 TCTAGGCATTTCAAATGACTATCAC 57.208 36.000 23.50 0.15 38.80 3.06
2082 2899 7.337938 TCTAGGCATTTCAAATGACTATCACA 58.662 34.615 23.50 5.75 38.80 3.58
2083 2900 7.994911 TCTAGGCATTTCAAATGACTATCACAT 59.005 33.333 23.50 1.77 38.80 3.21
2084 2901 9.276590 CTAGGCATTTCAAATGACTATCACATA 57.723 33.333 23.50 4.36 38.80 2.29
2085 2902 7.934457 AGGCATTTCAAATGACTATCACATAC 58.066 34.615 17.52 0.00 35.20 2.39
2086 2903 6.852853 GGCATTTCAAATGACTATCACATACG 59.147 38.462 14.65 0.00 0.00 3.06
2087 2904 6.852853 GCATTTCAAATGACTATCACATACGG 59.147 38.462 14.65 0.00 0.00 4.02
2088 2905 7.254761 GCATTTCAAATGACTATCACATACGGA 60.255 37.037 14.65 0.00 0.00 4.69
2089 2906 8.777413 CATTTCAAATGACTATCACATACGGAT 58.223 33.333 3.82 0.00 0.00 4.18
2090 2907 7.713764 TTCAAATGACTATCACATACGGATG 57.286 36.000 5.94 5.94 39.16 3.51
2092 2909 7.947282 TCAAATGACTATCACATACGGATGTA 58.053 34.615 14.23 2.61 44.82 2.29
2093 2910 8.585018 TCAAATGACTATCACATACGGATGTAT 58.415 33.333 14.23 10.02 44.82 2.29
2134 2951 7.036220 AGTGTAGATTCACTCATTTTACTCCG 58.964 38.462 0.00 0.00 44.07 4.63
2135 2952 6.812160 GTGTAGATTCACTCATTTTACTCCGT 59.188 38.462 0.00 0.00 35.68 4.69
2136 2953 7.972277 GTGTAGATTCACTCATTTTACTCCGTA 59.028 37.037 0.00 0.00 35.68 4.02
2137 2954 8.692710 TGTAGATTCACTCATTTTACTCCGTAT 58.307 33.333 0.00 0.00 0.00 3.06
2138 2955 8.969267 GTAGATTCACTCATTTTACTCCGTATG 58.031 37.037 0.00 0.00 0.00 2.39
2139 2956 7.556844 AGATTCACTCATTTTACTCCGTATGT 58.443 34.615 0.00 0.00 0.00 2.29
2140 2957 8.692710 AGATTCACTCATTTTACTCCGTATGTA 58.307 33.333 0.00 0.00 0.00 2.29
2141 2958 8.873215 ATTCACTCATTTTACTCCGTATGTAG 57.127 34.615 0.00 0.00 0.00 2.74
2142 2959 7.400599 TCACTCATTTTACTCCGTATGTAGT 57.599 36.000 0.00 0.00 0.00 2.73
2143 2960 7.478322 TCACTCATTTTACTCCGTATGTAGTC 58.522 38.462 0.00 0.00 0.00 2.59
2144 2961 7.121611 TCACTCATTTTACTCCGTATGTAGTCA 59.878 37.037 0.00 0.00 0.00 3.41
2145 2962 7.220300 CACTCATTTTACTCCGTATGTAGTCAC 59.780 40.741 0.00 0.00 0.00 3.67
2146 2963 7.122353 ACTCATTTTACTCCGTATGTAGTCACT 59.878 37.037 0.00 0.00 0.00 3.41
2147 2964 7.833786 TCATTTTACTCCGTATGTAGTCACTT 58.166 34.615 0.00 0.00 0.00 3.16
2148 2965 7.758076 TCATTTTACTCCGTATGTAGTCACTTG 59.242 37.037 0.00 0.00 0.00 3.16
2149 2966 6.579666 TTTACTCCGTATGTAGTCACTTGT 57.420 37.500 0.00 0.00 0.00 3.16
2150 2967 6.579666 TTACTCCGTATGTAGTCACTTGTT 57.420 37.500 0.00 0.00 0.00 2.83
2151 2968 4.806330 ACTCCGTATGTAGTCACTTGTTG 58.194 43.478 0.00 0.00 0.00 3.33
2152 2969 4.521639 ACTCCGTATGTAGTCACTTGTTGA 59.478 41.667 0.00 0.00 0.00 3.18
2153 2970 5.010314 ACTCCGTATGTAGTCACTTGTTGAA 59.990 40.000 0.00 0.00 35.39 2.69
2154 2971 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
2155 2972 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
2156 2973 6.367695 TCCGTATGTAGTCACTTGTTGAAATG 59.632 38.462 0.00 0.00 35.39 2.32
2157 2974 6.015504 CGTATGTAGTCACTTGTTGAAATGC 58.984 40.000 0.00 0.00 35.39 3.56
2158 2975 4.829064 TGTAGTCACTTGTTGAAATGCC 57.171 40.909 0.00 0.00 35.39 4.40
2159 2976 4.460263 TGTAGTCACTTGTTGAAATGCCT 58.540 39.130 0.00 0.00 35.39 4.75
2160 2977 5.616270 TGTAGTCACTTGTTGAAATGCCTA 58.384 37.500 0.00 0.00 35.39 3.93
2161 2978 6.058833 TGTAGTCACTTGTTGAAATGCCTAA 58.941 36.000 0.00 0.00 35.39 2.69
2162 2979 6.544197 TGTAGTCACTTGTTGAAATGCCTAAA 59.456 34.615 0.00 0.00 35.39 1.85
2163 2980 6.463995 AGTCACTTGTTGAAATGCCTAAAA 57.536 33.333 0.00 0.00 35.39 1.52
2164 2981 6.872920 AGTCACTTGTTGAAATGCCTAAAAA 58.127 32.000 0.00 0.00 35.39 1.94
2165 2982 6.980397 AGTCACTTGTTGAAATGCCTAAAAAG 59.020 34.615 0.00 0.00 35.39 2.27
2166 2983 6.978080 GTCACTTGTTGAAATGCCTAAAAAGA 59.022 34.615 0.00 0.00 35.39 2.52
2167 2984 6.978080 TCACTTGTTGAAATGCCTAAAAAGAC 59.022 34.615 0.00 0.00 0.00 3.01
2168 2985 6.756074 CACTTGTTGAAATGCCTAAAAAGACA 59.244 34.615 0.00 0.00 0.00 3.41
2169 2986 7.277539 CACTTGTTGAAATGCCTAAAAAGACAA 59.722 33.333 0.00 0.00 0.00 3.18
2170 2987 7.492344 ACTTGTTGAAATGCCTAAAAAGACAAG 59.508 33.333 0.00 0.00 43.36 3.16
2171 2988 6.872920 TGTTGAAATGCCTAAAAAGACAAGT 58.127 32.000 0.00 0.00 0.00 3.16
2172 2989 8.001881 TGTTGAAATGCCTAAAAAGACAAGTA 57.998 30.769 0.00 0.00 0.00 2.24
2173 2990 8.637986 TGTTGAAATGCCTAAAAAGACAAGTAT 58.362 29.630 0.00 0.00 0.00 2.12
2174 2991 9.476202 GTTGAAATGCCTAAAAAGACAAGTATT 57.524 29.630 0.00 0.00 0.00 1.89
2184 3001 9.211485 CTAAAAAGACAAGTATTTAGGAACGGA 57.789 33.333 0.00 0.00 33.69 4.69
2185 3002 7.668525 AAAAGACAAGTATTTAGGAACGGAG 57.331 36.000 0.00 0.00 0.00 4.63
2186 3003 5.340439 AGACAAGTATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
2187 3004 4.161754 AGACAAGTATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
2188 3005 4.098894 ACAAGTATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
2189 3006 4.161754 ACAAGTATTTAGGAACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
2300 3120 8.753133 TCAGCTATTATTATGCTATGCTACTGT 58.247 33.333 0.00 0.00 35.05 3.55
2332 3152 2.747989 GCCAGTTAAAGGAAGTAGGCAC 59.252 50.000 0.00 0.00 35.95 5.01
2473 3296 7.718272 TTCATTTTTCCTTGAATTGCTTGAG 57.282 32.000 0.00 0.00 0.00 3.02
2607 3444 8.985315 TGATAGTTTGATTTATGCTCAAGGAT 57.015 30.769 0.00 0.00 34.33 3.24
2781 3633 8.697292 CCAGCTAAGATACTAGGTTACTTTCTT 58.303 37.037 0.00 0.00 0.00 2.52
2783 3635 8.916062 AGCTAAGATACTAGGTTACTTTCTTCC 58.084 37.037 0.00 0.00 0.00 3.46
2788 3640 9.954992 AGATACTAGGTTACTTTCTTCCCTATT 57.045 33.333 0.00 0.00 0.00 1.73
3047 3899 9.657121 AAAATAACAACAACAACAACAACAAAG 57.343 25.926 0.00 0.00 0.00 2.77
3048 3900 4.723879 ACAACAACAACAACAACAAAGC 57.276 36.364 0.00 0.00 0.00 3.51
3049 3901 3.496507 ACAACAACAACAACAACAAAGCC 59.503 39.130 0.00 0.00 0.00 4.35
3050 3902 3.676291 ACAACAACAACAACAAAGCCT 57.324 38.095 0.00 0.00 0.00 4.58
3051 3903 4.001618 ACAACAACAACAACAAAGCCTT 57.998 36.364 0.00 0.00 0.00 4.35
3052 3904 4.384940 ACAACAACAACAACAAAGCCTTT 58.615 34.783 0.00 0.00 0.00 3.11
3053 3905 5.542779 ACAACAACAACAACAAAGCCTTTA 58.457 33.333 0.00 0.00 0.00 1.85
3054 3906 5.637387 ACAACAACAACAACAAAGCCTTTAG 59.363 36.000 0.00 0.00 0.00 1.85
3055 3907 5.400066 ACAACAACAACAAAGCCTTTAGT 57.600 34.783 0.00 0.00 0.00 2.24
3056 3908 5.407502 ACAACAACAACAAAGCCTTTAGTC 58.592 37.500 0.00 0.00 0.00 2.59
3057 3909 4.649088 ACAACAACAAAGCCTTTAGTCC 57.351 40.909 0.00 0.00 0.00 3.85
3058 3910 3.383505 ACAACAACAAAGCCTTTAGTCCC 59.616 43.478 0.00 0.00 0.00 4.46
3059 3911 3.306472 ACAACAAAGCCTTTAGTCCCA 57.694 42.857 0.00 0.00 0.00 4.37
3060 3912 3.637769 ACAACAAAGCCTTTAGTCCCAA 58.362 40.909 0.00 0.00 0.00 4.12
3061 3913 4.027437 ACAACAAAGCCTTTAGTCCCAAA 58.973 39.130 0.00 0.00 0.00 3.28
3062 3914 4.142026 ACAACAAAGCCTTTAGTCCCAAAC 60.142 41.667 0.00 0.00 0.00 2.93
3063 3915 3.637769 ACAAAGCCTTTAGTCCCAAACA 58.362 40.909 0.00 0.00 0.00 2.83
3064 3916 4.027437 ACAAAGCCTTTAGTCCCAAACAA 58.973 39.130 0.00 0.00 0.00 2.83
3065 3917 4.099419 ACAAAGCCTTTAGTCCCAAACAAG 59.901 41.667 0.00 0.00 0.00 3.16
3066 3918 3.595190 AGCCTTTAGTCCCAAACAAGT 57.405 42.857 0.00 0.00 0.00 3.16
3067 3919 3.910989 AGCCTTTAGTCCCAAACAAGTT 58.089 40.909 0.00 0.00 0.00 2.66
3068 3920 3.636764 AGCCTTTAGTCCCAAACAAGTTG 59.363 43.478 0.00 0.00 36.94 3.16
3077 3929 1.995376 CAAACAAGTTGGGGTAGGCT 58.005 50.000 7.96 0.00 33.18 4.58
3078 3930 3.149005 CAAACAAGTTGGGGTAGGCTA 57.851 47.619 7.96 0.00 33.18 3.93
3079 3931 3.081804 CAAACAAGTTGGGGTAGGCTAG 58.918 50.000 7.96 0.00 33.18 3.42
3080 3932 2.337359 ACAAGTTGGGGTAGGCTAGA 57.663 50.000 7.96 0.00 0.00 2.43
3081 3933 2.188817 ACAAGTTGGGGTAGGCTAGAG 58.811 52.381 7.96 0.00 0.00 2.43
3082 3934 1.486726 CAAGTTGGGGTAGGCTAGAGG 59.513 57.143 0.00 0.00 0.00 3.69
3083 3935 0.717196 AGTTGGGGTAGGCTAGAGGT 59.283 55.000 0.00 0.00 0.00 3.85
3084 3936 0.831307 GTTGGGGTAGGCTAGAGGTG 59.169 60.000 0.00 0.00 0.00 4.00
3085 3937 0.714180 TTGGGGTAGGCTAGAGGTGA 59.286 55.000 0.00 0.00 0.00 4.02
3086 3938 0.714180 TGGGGTAGGCTAGAGGTGAA 59.286 55.000 0.00 0.00 0.00 3.18
3087 3939 1.079825 TGGGGTAGGCTAGAGGTGAAA 59.920 52.381 0.00 0.00 0.00 2.69
3088 3940 1.485480 GGGGTAGGCTAGAGGTGAAAC 59.515 57.143 0.00 0.00 0.00 2.78
3089 3941 2.185387 GGGTAGGCTAGAGGTGAAACA 58.815 52.381 0.00 0.00 39.98 2.83
3090 3942 2.570302 GGGTAGGCTAGAGGTGAAACAA 59.430 50.000 0.00 0.00 39.98 2.83
3091 3943 3.369576 GGGTAGGCTAGAGGTGAAACAAG 60.370 52.174 0.00 0.00 39.98 3.16
3092 3944 3.261137 GGTAGGCTAGAGGTGAAACAAGT 59.739 47.826 0.00 0.00 39.98 3.16
3093 3945 4.262938 GGTAGGCTAGAGGTGAAACAAGTT 60.263 45.833 0.00 0.00 39.98 2.66
3094 3946 3.744660 AGGCTAGAGGTGAAACAAGTTG 58.255 45.455 0.00 0.00 39.98 3.16
3095 3947 3.136626 AGGCTAGAGGTGAAACAAGTTGT 59.863 43.478 1.64 1.64 39.98 3.32
3096 3948 3.251004 GGCTAGAGGTGAAACAAGTTGTG 59.749 47.826 9.79 0.00 39.98 3.33
3097 3949 3.877508 GCTAGAGGTGAAACAAGTTGTGT 59.122 43.478 9.79 3.15 44.64 3.72
3098 3950 5.054477 GCTAGAGGTGAAACAAGTTGTGTA 58.946 41.667 9.79 0.00 40.60 2.90
3099 3951 5.701290 GCTAGAGGTGAAACAAGTTGTGTAT 59.299 40.000 9.79 0.00 40.60 2.29
3100 3952 6.128526 GCTAGAGGTGAAACAAGTTGTGTATC 60.129 42.308 9.79 9.22 40.60 2.24
3101 3953 5.930135 AGAGGTGAAACAAGTTGTGTATCT 58.070 37.500 9.79 4.66 40.60 1.98
3102 3954 5.992217 AGAGGTGAAACAAGTTGTGTATCTC 59.008 40.000 9.79 13.13 40.60 2.75
3103 3955 5.930135 AGGTGAAACAAGTTGTGTATCTCT 58.070 37.500 9.79 7.90 40.60 3.10
3104 3956 6.357367 AGGTGAAACAAGTTGTGTATCTCTT 58.643 36.000 9.79 0.00 40.60 2.85
3105 3957 6.828785 AGGTGAAACAAGTTGTGTATCTCTTT 59.171 34.615 9.79 0.00 40.60 2.52
3106 3958 7.990886 AGGTGAAACAAGTTGTGTATCTCTTTA 59.009 33.333 9.79 0.00 40.60 1.85
3107 3959 8.617809 GGTGAAACAAGTTGTGTATCTCTTTAA 58.382 33.333 9.79 0.00 40.60 1.52
3108 3960 9.997482 GTGAAACAAGTTGTGTATCTCTTTAAA 57.003 29.630 9.79 0.00 40.60 1.52
3204 4056 6.119536 TGATGTCTCTTGGTGTAAAAAGTGT 58.880 36.000 0.00 0.00 0.00 3.55
3234 4086 7.119846 GCTTTTGTGAGACTAGGACAAACATAT 59.880 37.037 9.73 0.00 38.86 1.78
3314 4166 6.942976 AGAAAACAAATGAGATGCCATTCAT 58.057 32.000 0.00 0.00 35.86 2.57
4269 5159 9.832445 TTTAAATCATATACTCCCTCTGTTCAC 57.168 33.333 0.00 0.00 0.00 3.18
4270 5160 7.682787 AAATCATATACTCCCTCTGTTCACT 57.317 36.000 0.00 0.00 0.00 3.41
4271 5161 7.682787 AATCATATACTCCCTCTGTTCACTT 57.317 36.000 0.00 0.00 0.00 3.16
4272 5162 7.682787 ATCATATACTCCCTCTGTTCACTTT 57.317 36.000 0.00 0.00 0.00 2.66
4273 5163 7.496346 TCATATACTCCCTCTGTTCACTTTT 57.504 36.000 0.00 0.00 0.00 2.27
4274 5164 7.331026 TCATATACTCCCTCTGTTCACTTTTG 58.669 38.462 0.00 0.00 0.00 2.44
4275 5165 3.933861 ACTCCCTCTGTTCACTTTTGT 57.066 42.857 0.00 0.00 0.00 2.83
4276 5166 6.681729 ATACTCCCTCTGTTCACTTTTGTA 57.318 37.500 0.00 0.00 0.00 2.41
4277 5167 5.367945 ACTCCCTCTGTTCACTTTTGTAA 57.632 39.130 0.00 0.00 0.00 2.41
4278 5168 5.368989 ACTCCCTCTGTTCACTTTTGTAAG 58.631 41.667 0.00 0.00 37.40 2.34
4279 5169 5.104485 ACTCCCTCTGTTCACTTTTGTAAGT 60.104 40.000 0.00 0.00 45.40 2.24
4280 5170 5.365619 TCCCTCTGTTCACTTTTGTAAGTC 58.634 41.667 0.00 0.00 42.67 3.01
4281 5171 4.211374 CCCTCTGTTCACTTTTGTAAGTCG 59.789 45.833 0.00 0.00 42.67 4.18
4282 5172 4.809426 CCTCTGTTCACTTTTGTAAGTCGT 59.191 41.667 0.00 0.00 42.67 4.34
4283 5173 5.293569 CCTCTGTTCACTTTTGTAAGTCGTT 59.706 40.000 0.00 0.00 42.67 3.85
4284 5174 6.183360 CCTCTGTTCACTTTTGTAAGTCGTTT 60.183 38.462 0.00 0.00 42.67 3.60
4285 5175 7.010738 CCTCTGTTCACTTTTGTAAGTCGTTTA 59.989 37.037 0.00 0.00 42.67 2.01
4286 5176 8.254178 TCTGTTCACTTTTGTAAGTCGTTTAA 57.746 30.769 0.00 0.00 42.67 1.52
4287 5177 8.385111 TCTGTTCACTTTTGTAAGTCGTTTAAG 58.615 33.333 0.00 0.00 42.67 1.85
4288 5178 8.254178 TGTTCACTTTTGTAAGTCGTTTAAGA 57.746 30.769 0.00 0.00 42.67 2.10
4289 5179 8.170553 TGTTCACTTTTGTAAGTCGTTTAAGAC 58.829 33.333 0.00 0.00 42.67 3.01
4290 5180 7.830940 TCACTTTTGTAAGTCGTTTAAGACA 57.169 32.000 0.00 0.00 42.67 3.41
4291 5181 7.902032 TCACTTTTGTAAGTCGTTTAAGACAG 58.098 34.615 0.00 0.00 42.67 3.51
4292 5182 6.627671 CACTTTTGTAAGTCGTTTAAGACAGC 59.372 38.462 0.00 0.00 42.67 4.40
4293 5183 6.537660 ACTTTTGTAAGTCGTTTAAGACAGCT 59.462 34.615 0.00 0.00 40.60 4.24
4294 5184 5.900339 TTGTAAGTCGTTTAAGACAGCTG 57.100 39.130 13.48 13.48 43.24 4.24
4295 5185 5.190992 TGTAAGTCGTTTAAGACAGCTGA 57.809 39.130 23.35 0.00 43.24 4.26
4296 5186 5.593968 TGTAAGTCGTTTAAGACAGCTGAA 58.406 37.500 23.35 0.04 43.24 3.02
4297 5187 6.044046 TGTAAGTCGTTTAAGACAGCTGAAA 58.956 36.000 23.35 7.52 43.24 2.69
4298 5188 6.704493 TGTAAGTCGTTTAAGACAGCTGAAAT 59.296 34.615 23.35 7.92 43.24 2.17
4299 5189 6.619801 AAGTCGTTTAAGACAGCTGAAATT 57.380 33.333 23.35 13.76 43.24 1.82
4300 5190 5.990408 AGTCGTTTAAGACAGCTGAAATTG 58.010 37.500 23.35 7.48 43.24 2.32
4301 5191 5.758296 AGTCGTTTAAGACAGCTGAAATTGA 59.242 36.000 23.35 9.59 43.24 2.57
4302 5192 6.260050 AGTCGTTTAAGACAGCTGAAATTGAA 59.740 34.615 23.35 11.43 43.24 2.69
4303 5193 6.357240 GTCGTTTAAGACAGCTGAAATTGAAC 59.643 38.462 23.35 20.12 40.65 3.18
4304 5194 6.260050 TCGTTTAAGACAGCTGAAATTGAACT 59.740 34.615 23.35 0.00 27.41 3.01
4305 5195 6.358030 CGTTTAAGACAGCTGAAATTGAACTG 59.642 38.462 23.35 14.61 27.41 3.16
4306 5196 6.942532 TTAAGACAGCTGAAATTGAACTGT 57.057 33.333 23.35 0.00 43.93 3.55
4307 5197 5.841957 AAGACAGCTGAAATTGAACTGTT 57.158 34.783 23.35 0.00 41.45 3.16
4308 5198 5.841957 AGACAGCTGAAATTGAACTGTTT 57.158 34.783 23.35 0.00 41.45 2.83
4309 5199 6.212888 AGACAGCTGAAATTGAACTGTTTT 57.787 33.333 23.35 0.00 41.45 2.43
4310 5200 7.333528 AGACAGCTGAAATTGAACTGTTTTA 57.666 32.000 23.35 0.00 41.45 1.52
4311 5201 7.420800 AGACAGCTGAAATTGAACTGTTTTAG 58.579 34.615 23.35 0.00 41.45 1.85
4312 5202 6.507023 ACAGCTGAAATTGAACTGTTTTAGG 58.493 36.000 23.35 0.00 38.38 2.69
4313 5203 6.096846 ACAGCTGAAATTGAACTGTTTTAGGT 59.903 34.615 23.35 0.00 38.38 3.08
4314 5204 6.418819 CAGCTGAAATTGAACTGTTTTAGGTG 59.581 38.462 8.42 7.20 40.48 4.00
4315 5205 5.175673 GCTGAAATTGAACTGTTTTAGGTGC 59.824 40.000 0.00 0.00 0.00 5.01
4316 5206 6.463995 TGAAATTGAACTGTTTTAGGTGCT 57.536 33.333 0.00 0.00 0.00 4.40
4317 5207 6.272318 TGAAATTGAACTGTTTTAGGTGCTG 58.728 36.000 0.00 0.00 0.00 4.41
4318 5208 5.852282 AATTGAACTGTTTTAGGTGCTGT 57.148 34.783 0.00 0.00 0.00 4.40
4319 5209 4.893424 TTGAACTGTTTTAGGTGCTGTC 57.107 40.909 0.00 0.00 0.00 3.51
4320 5210 4.150897 TGAACTGTTTTAGGTGCTGTCT 57.849 40.909 0.00 0.00 0.00 3.41
4321 5211 4.523083 TGAACTGTTTTAGGTGCTGTCTT 58.477 39.130 0.00 0.00 0.00 3.01
4322 5212 5.676552 TGAACTGTTTTAGGTGCTGTCTTA 58.323 37.500 0.00 0.00 0.00 2.10
4323 5213 6.116806 TGAACTGTTTTAGGTGCTGTCTTAA 58.883 36.000 0.00 0.00 0.00 1.85
4324 5214 6.600032 TGAACTGTTTTAGGTGCTGTCTTAAA 59.400 34.615 0.00 0.00 0.00 1.52
4325 5215 7.284489 TGAACTGTTTTAGGTGCTGTCTTAAAT 59.716 33.333 0.00 0.00 0.00 1.40
4326 5216 6.970484 ACTGTTTTAGGTGCTGTCTTAAATG 58.030 36.000 0.00 0.00 0.00 2.32
4327 5217 6.546034 ACTGTTTTAGGTGCTGTCTTAAATGT 59.454 34.615 0.00 0.00 0.00 2.71
4328 5218 6.966021 TGTTTTAGGTGCTGTCTTAAATGTC 58.034 36.000 0.00 0.00 0.00 3.06
4329 5219 6.770785 TGTTTTAGGTGCTGTCTTAAATGTCT 59.229 34.615 0.00 0.00 0.00 3.41
4330 5220 7.934665 TGTTTTAGGTGCTGTCTTAAATGTCTA 59.065 33.333 0.00 0.00 0.00 2.59
4331 5221 8.780249 GTTTTAGGTGCTGTCTTAAATGTCTAA 58.220 33.333 0.00 0.00 0.00 2.10
4332 5222 8.911918 TTTAGGTGCTGTCTTAAATGTCTAAA 57.088 30.769 0.00 0.00 0.00 1.85
4333 5223 8.911918 TTAGGTGCTGTCTTAAATGTCTAAAA 57.088 30.769 0.00 0.00 0.00 1.52
4334 5224 7.440523 AGGTGCTGTCTTAAATGTCTAAAAG 57.559 36.000 0.00 0.00 0.00 2.27
4335 5225 6.431234 AGGTGCTGTCTTAAATGTCTAAAAGG 59.569 38.462 0.00 0.00 0.00 3.11
4336 5226 6.206829 GGTGCTGTCTTAAATGTCTAAAAGGT 59.793 38.462 0.00 0.00 0.00 3.50
4337 5227 7.298854 GTGCTGTCTTAAATGTCTAAAAGGTC 58.701 38.462 0.00 0.00 0.00 3.85
4338 5228 7.173390 GTGCTGTCTTAAATGTCTAAAAGGTCT 59.827 37.037 0.00 0.00 0.00 3.85
4339 5229 7.719633 TGCTGTCTTAAATGTCTAAAAGGTCTT 59.280 33.333 0.00 0.00 0.00 3.01
4340 5230 9.216117 GCTGTCTTAAATGTCTAAAAGGTCTTA 57.784 33.333 0.00 0.00 0.00 2.10
4348 5238 9.965824 AAATGTCTAAAAGGTCTTACAAATGTG 57.034 29.630 0.00 0.00 0.00 3.21
4349 5239 8.918202 ATGTCTAAAAGGTCTTACAAATGTGA 57.082 30.769 0.00 0.00 0.00 3.58
4350 5240 8.740123 TGTCTAAAAGGTCTTACAAATGTGAA 57.260 30.769 0.00 0.00 0.00 3.18
4351 5241 8.617809 TGTCTAAAAGGTCTTACAAATGTGAAC 58.382 33.333 0.00 0.00 0.00 3.18
4352 5242 8.617809 GTCTAAAAGGTCTTACAAATGTGAACA 58.382 33.333 0.00 0.00 0.00 3.18
4353 5243 8.836413 TCTAAAAGGTCTTACAAATGTGAACAG 58.164 33.333 0.00 0.00 0.00 3.16
4354 5244 7.639113 AAAAGGTCTTACAAATGTGAACAGA 57.361 32.000 0.00 0.00 0.00 3.41
4355 5245 6.867662 AAGGTCTTACAAATGTGAACAGAG 57.132 37.500 0.00 0.00 0.00 3.35
4356 5246 5.308825 AGGTCTTACAAATGTGAACAGAGG 58.691 41.667 0.00 0.00 0.00 3.69
4357 5247 4.455877 GGTCTTACAAATGTGAACAGAGGG 59.544 45.833 0.00 0.00 0.00 4.30
4599 5490 4.682778 TTATCAGTGGTAAGGGGATTCG 57.317 45.455 0.00 0.00 0.00 3.34
4604 5495 4.127171 CAGTGGTAAGGGGATTCGTATTG 58.873 47.826 0.00 0.00 0.00 1.90
4759 5663 1.558294 AGGGAGTGATACGGGTTTTCC 59.442 52.381 0.00 0.00 39.75 3.13
4809 5713 0.535102 CGCACCTGGGGAATGGATAC 60.535 60.000 0.00 0.00 0.00 2.24
4829 5733 4.908601 ACATCTTACCTGTGGTTCATGA 57.091 40.909 0.00 0.00 37.09 3.07
4848 5752 4.857871 TGACTTCACTTTGAAAGACGTG 57.142 40.909 12.53 0.55 35.73 4.49
4872 5776 5.865552 GCATGTAGTTACTTCTACCGAACAA 59.134 40.000 0.00 0.00 39.39 2.83
4970 5874 1.000955 ACAGAGCCTGTAACTTCCGTG 59.999 52.381 6.10 0.00 43.46 4.94
4992 5896 1.586541 GCCACAAACTAGGCCTTGC 59.413 57.895 12.58 0.00 45.18 4.01
5003 5907 2.347490 GCCTTGCGGGAAGAGACA 59.653 61.111 11.11 0.00 37.23 3.41
5120 6026 4.039973 TCTCTGTCCCAAAATAAGTGTCGT 59.960 41.667 0.00 0.00 0.00 4.34
5131 6037 8.450964 CCAAAATAAGTGTCGTTGATTCAGTAT 58.549 33.333 0.00 0.00 0.00 2.12
5169 6075 5.405571 AGTTGTACTAAATCAGCGACACTTG 59.594 40.000 0.00 0.00 0.00 3.16
5176 6082 1.090728 TCAGCGACACTTGTTTTGCA 58.909 45.000 2.53 0.00 0.00 4.08
5179 6085 1.201181 AGCGACACTTGTTTTGCAACA 59.799 42.857 0.00 0.00 41.39 3.33
5229 6138 7.676004 TGATCTGTTGGAAATGAAGTAGTGTA 58.324 34.615 0.00 0.00 0.00 2.90
5233 6142 8.590204 TCTGTTGGAAATGAAGTAGTGTACATA 58.410 33.333 0.00 0.00 0.00 2.29
5320 6229 6.908825 TCCTTATTGAATTTGTGTACTGTGC 58.091 36.000 0.00 0.00 0.00 4.57
5322 6231 7.176515 TCCTTATTGAATTTGTGTACTGTGCAT 59.823 33.333 1.04 0.00 0.00 3.96
5323 6232 8.458052 CCTTATTGAATTTGTGTACTGTGCATA 58.542 33.333 1.04 0.00 0.00 3.14
5325 6234 9.786105 TTATTGAATTTGTGTACTGTGCATATG 57.214 29.630 1.04 0.00 0.00 1.78
5326 6235 5.639757 TGAATTTGTGTACTGTGCATATGC 58.360 37.500 21.09 21.09 42.50 3.14
5337 6246 3.239861 GCATATGCACCTAGGAGCC 57.760 57.895 25.94 8.49 41.59 4.70
5338 6247 0.397941 GCATATGCACCTAGGAGCCA 59.602 55.000 25.94 15.42 41.59 4.75
5339 6248 1.202806 GCATATGCACCTAGGAGCCAA 60.203 52.381 25.94 15.39 41.59 4.52
5342 6251 1.839424 ATGCACCTAGGAGCCAAAAC 58.161 50.000 25.94 0.85 0.00 2.43
5344 6253 0.881796 GCACCTAGGAGCCAAAACAC 59.118 55.000 19.57 0.00 0.00 3.32
5345 6254 1.534729 CACCTAGGAGCCAAAACACC 58.465 55.000 17.98 0.00 0.00 4.16
5346 6255 0.036306 ACCTAGGAGCCAAAACACCG 59.964 55.000 17.98 0.00 0.00 4.94
5347 6256 1.305930 CCTAGGAGCCAAAACACCGC 61.306 60.000 1.05 0.00 0.00 5.68
5348 6257 1.635663 CTAGGAGCCAAAACACCGCG 61.636 60.000 0.00 0.00 0.00 6.46
5349 6258 2.386064 TAGGAGCCAAAACACCGCGT 62.386 55.000 4.92 0.00 0.00 6.01
5350 6259 2.251371 GAGCCAAAACACCGCGTC 59.749 61.111 4.92 0.00 0.00 5.19
5351 6260 3.249973 GAGCCAAAACACCGCGTCC 62.250 63.158 4.92 0.00 0.00 4.79
5353 6262 1.962306 GCCAAAACACCGCGTCCTA 60.962 57.895 4.92 0.00 0.00 2.94
5354 6263 1.864176 CCAAAACACCGCGTCCTAC 59.136 57.895 4.92 0.00 0.00 3.18
5355 6264 0.601841 CCAAAACACCGCGTCCTACT 60.602 55.000 4.92 0.00 0.00 2.57
5356 6265 1.223187 CAAAACACCGCGTCCTACTT 58.777 50.000 4.92 0.00 0.00 2.24
5357 6266 1.600485 CAAAACACCGCGTCCTACTTT 59.400 47.619 4.92 0.00 0.00 2.66
5358 6267 1.505425 AAACACCGCGTCCTACTTTC 58.495 50.000 4.92 0.00 0.00 2.62
5359 6268 0.677842 AACACCGCGTCCTACTTTCT 59.322 50.000 4.92 0.00 0.00 2.52
5361 6270 1.471684 ACACCGCGTCCTACTTTCTAG 59.528 52.381 4.92 0.00 0.00 2.43
5675 6632 9.912634 ATCGAAGCAAAATTCTTAAGATTTTCA 57.087 25.926 20.15 1.65 30.21 2.69
5676 6633 9.912634 TCGAAGCAAAATTCTTAAGATTTTCAT 57.087 25.926 20.15 8.00 30.21 2.57
5711 6850 1.772836 AGCAGGGCTTGAATGAATCC 58.227 50.000 0.00 0.00 33.89 3.01
5712 6851 1.006281 AGCAGGGCTTGAATGAATCCA 59.994 47.619 0.00 0.00 33.89 3.41
5713 6852 1.135721 GCAGGGCTTGAATGAATCCAC 59.864 52.381 0.00 0.00 0.00 4.02
5714 6853 1.753073 CAGGGCTTGAATGAATCCACC 59.247 52.381 0.00 0.00 0.00 4.61
5715 6854 1.358787 AGGGCTTGAATGAATCCACCA 59.641 47.619 0.00 0.00 0.00 4.17
5716 6855 1.478105 GGGCTTGAATGAATCCACCAC 59.522 52.381 0.00 0.00 0.00 4.16
5717 6856 2.450476 GGCTTGAATGAATCCACCACT 58.550 47.619 0.00 0.00 0.00 4.00
5718 6857 2.827921 GGCTTGAATGAATCCACCACTT 59.172 45.455 0.00 0.00 0.00 3.16
5731 6870 2.422235 CCACCACTTCCACCAACTTGTA 60.422 50.000 0.00 0.00 0.00 2.41
5749 6888 7.849804 ACTTGTATGGTATTAGCTTGTCTTG 57.150 36.000 0.00 0.00 0.00 3.02
5751 6890 5.123227 TGTATGGTATTAGCTTGTCTTGGC 58.877 41.667 0.00 0.00 0.00 4.52
5766 6905 1.921045 TTGGCCGTGTGAATCATGCG 61.921 55.000 0.00 3.19 0.00 4.73
5777 6916 3.002656 GTGAATCATGCGATGTGTTAGGG 59.997 47.826 0.00 0.00 30.13 3.53
5780 6919 1.831106 TCATGCGATGTGTTAGGGACT 59.169 47.619 0.00 0.00 46.37 3.85
5839 6978 8.268605 GGAGGAGTCATTTCTTAGGATAGTTTT 58.731 37.037 0.00 0.00 0.00 2.43
5861 7000 3.386768 TCTACAGAGCTTGCTTCGTTT 57.613 42.857 0.00 0.00 0.00 3.60
5862 7001 3.059884 TCTACAGAGCTTGCTTCGTTTG 58.940 45.455 0.00 0.00 0.00 2.93
5863 7002 0.308993 ACAGAGCTTGCTTCGTTTGC 59.691 50.000 0.00 0.00 0.00 3.68
5864 7003 0.308684 CAGAGCTTGCTTCGTTTGCA 59.691 50.000 0.00 0.00 38.80 4.08
5865 7004 0.590195 AGAGCTTGCTTCGTTTGCAG 59.410 50.000 0.00 0.00 41.71 4.41
5867 7006 0.819259 AGCTTGCTTCGTTTGCAGGA 60.819 50.000 11.53 0.00 41.71 3.86
5868 7007 0.242017 GCTTGCTTCGTTTGCAGGAT 59.758 50.000 11.53 0.00 41.71 3.24
5869 7008 1.336240 GCTTGCTTCGTTTGCAGGATT 60.336 47.619 11.53 0.00 41.71 3.01
5870 7009 2.095263 GCTTGCTTCGTTTGCAGGATTA 60.095 45.455 11.53 0.00 41.71 1.75
5871 7010 3.611530 GCTTGCTTCGTTTGCAGGATTAA 60.612 43.478 11.53 0.00 41.71 1.40
5872 7011 4.545610 CTTGCTTCGTTTGCAGGATTAAA 58.454 39.130 0.00 0.00 41.71 1.52
5873 7012 4.576216 TGCTTCGTTTGCAGGATTAAAA 57.424 36.364 0.00 0.00 35.31 1.52
5874 7013 4.295051 TGCTTCGTTTGCAGGATTAAAAC 58.705 39.130 0.00 0.00 35.31 2.43
5875 7014 3.673338 GCTTCGTTTGCAGGATTAAAACC 59.327 43.478 0.00 0.00 31.53 3.27
5876 7015 3.926821 TCGTTTGCAGGATTAAAACCC 57.073 42.857 0.00 0.00 31.53 4.11
5881 7020 5.124776 CGTTTGCAGGATTAAAACCCATAGA 59.875 40.000 0.00 0.00 31.53 1.98
5882 7021 6.349777 CGTTTGCAGGATTAAAACCCATAGAA 60.350 38.462 0.00 0.00 31.53 2.10
5937 7076 8.661345 TGGTTTATTAGCCCCTTTTGTATTTTT 58.339 29.630 0.00 0.00 0.00 1.94
5938 7077 8.941977 GGTTTATTAGCCCCTTTTGTATTTTTG 58.058 33.333 0.00 0.00 0.00 2.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 6.489675 TGCACCGTATTTTTACGTTTTGTAA 58.510 32.000 0.00 0.00 41.25 2.41
11 12 6.052840 TGCACCGTATTTTTACGTTTTGTA 57.947 33.333 0.00 0.00 41.46 2.41
12 13 4.918037 TGCACCGTATTTTTACGTTTTGT 58.082 34.783 0.00 0.00 41.46 2.83
13 14 6.142480 TCAATGCACCGTATTTTTACGTTTTG 59.858 34.615 0.00 1.26 41.46 2.44
14 15 6.207213 TCAATGCACCGTATTTTTACGTTTT 58.793 32.000 0.00 0.00 41.46 2.43
15 16 5.759963 TCAATGCACCGTATTTTTACGTTT 58.240 33.333 0.00 0.00 41.46 3.60
16 17 5.359716 TCAATGCACCGTATTTTTACGTT 57.640 34.783 0.00 0.00 41.46 3.99
17 18 5.106475 ACATCAATGCACCGTATTTTTACGT 60.106 36.000 0.00 0.00 41.46 3.57
18 19 5.328691 ACATCAATGCACCGTATTTTTACG 58.671 37.500 0.00 0.00 42.56 3.18
19 20 6.318628 TGACATCAATGCACCGTATTTTTAC 58.681 36.000 0.00 0.00 0.00 2.01
20 21 6.502136 TGACATCAATGCACCGTATTTTTA 57.498 33.333 0.00 0.00 0.00 1.52
21 22 5.384063 TGACATCAATGCACCGTATTTTT 57.616 34.783 0.00 0.00 0.00 1.94
22 23 5.384063 TTGACATCAATGCACCGTATTTT 57.616 34.783 0.00 0.00 0.00 1.82
23 24 5.384063 TTTGACATCAATGCACCGTATTT 57.616 34.783 0.00 0.00 35.55 1.40
24 25 5.384063 TTTTGACATCAATGCACCGTATT 57.616 34.783 0.00 0.00 35.55 1.89
25 26 5.581126 ATTTTGACATCAATGCACCGTAT 57.419 34.783 0.00 0.00 35.55 3.06
26 27 5.877564 TCTATTTTGACATCAATGCACCGTA 59.122 36.000 0.00 0.00 35.55 4.02
27 28 3.940209 ATTTTGACATCAATGCACCGT 57.060 38.095 0.00 0.00 35.55 4.83
28 29 5.065090 TCTCTATTTTGACATCAATGCACCG 59.935 40.000 0.00 0.00 35.55 4.94
29 30 6.441093 TCTCTATTTTGACATCAATGCACC 57.559 37.500 0.00 0.00 35.55 5.01
30 31 6.459298 CCCTCTCTATTTTGACATCAATGCAC 60.459 42.308 0.00 0.00 35.55 4.57
31 32 5.591472 CCCTCTCTATTTTGACATCAATGCA 59.409 40.000 0.00 0.00 35.55 3.96
32 33 5.009410 CCCCTCTCTATTTTGACATCAATGC 59.991 44.000 0.00 0.00 35.55 3.56
33 34 5.533903 CCCCCTCTCTATTTTGACATCAATG 59.466 44.000 0.00 0.00 35.55 2.82
34 35 5.194537 ACCCCCTCTCTATTTTGACATCAAT 59.805 40.000 0.00 0.00 35.55 2.57
35 36 4.540099 ACCCCCTCTCTATTTTGACATCAA 59.460 41.667 0.00 0.00 0.00 2.57
36 37 4.080356 CACCCCCTCTCTATTTTGACATCA 60.080 45.833 0.00 0.00 0.00 3.07
37 38 4.164221 TCACCCCCTCTCTATTTTGACATC 59.836 45.833 0.00 0.00 0.00 3.06
38 39 4.111577 TCACCCCCTCTCTATTTTGACAT 58.888 43.478 0.00 0.00 0.00 3.06
39 40 3.526899 TCACCCCCTCTCTATTTTGACA 58.473 45.455 0.00 0.00 0.00 3.58
40 41 4.164221 TCATCACCCCCTCTCTATTTTGAC 59.836 45.833 0.00 0.00 0.00 3.18
41 42 4.164221 GTCATCACCCCCTCTCTATTTTGA 59.836 45.833 0.00 0.00 0.00 2.69
42 43 4.080356 TGTCATCACCCCCTCTCTATTTTG 60.080 45.833 0.00 0.00 0.00 2.44
43 44 4.111577 TGTCATCACCCCCTCTCTATTTT 58.888 43.478 0.00 0.00 0.00 1.82
44 45 3.736094 TGTCATCACCCCCTCTCTATTT 58.264 45.455 0.00 0.00 0.00 1.40
45 46 3.421394 TGTCATCACCCCCTCTCTATT 57.579 47.619 0.00 0.00 0.00 1.73
46 47 3.421394 TTGTCATCACCCCCTCTCTAT 57.579 47.619 0.00 0.00 0.00 1.98
47 48 2.940514 TTGTCATCACCCCCTCTCTA 57.059 50.000 0.00 0.00 0.00 2.43
48 49 2.044793 TTTGTCATCACCCCCTCTCT 57.955 50.000 0.00 0.00 0.00 3.10
49 50 2.879103 TTTTGTCATCACCCCCTCTC 57.121 50.000 0.00 0.00 0.00 3.20
50 51 3.833559 AATTTTGTCATCACCCCCTCT 57.166 42.857 0.00 0.00 0.00 3.69
51 52 4.770010 TGTAAATTTTGTCATCACCCCCTC 59.230 41.667 0.00 0.00 0.00 4.30
52 53 4.746466 TGTAAATTTTGTCATCACCCCCT 58.254 39.130 0.00 0.00 0.00 4.79
53 54 5.476091 TTGTAAATTTTGTCATCACCCCC 57.524 39.130 0.00 0.00 0.00 5.40
54 55 6.074034 CGTTTTGTAAATTTTGTCATCACCCC 60.074 38.462 0.00 0.00 0.00 4.95
55 56 6.477360 ACGTTTTGTAAATTTTGTCATCACCC 59.523 34.615 0.00 0.00 0.00 4.61
56 57 7.458038 ACGTTTTGTAAATTTTGTCATCACC 57.542 32.000 0.00 0.00 0.00 4.02
70 71 6.489675 TGCACCGTATTTTTACGTTTTGTAA 58.510 32.000 0.00 0.00 41.25 2.41
71 72 6.052840 TGCACCGTATTTTTACGTTTTGTA 57.947 33.333 0.00 0.00 41.46 2.41
72 73 4.918037 TGCACCGTATTTTTACGTTTTGT 58.082 34.783 0.00 0.00 41.46 2.83
73 74 6.142480 TCAATGCACCGTATTTTTACGTTTTG 59.858 34.615 0.00 1.26 41.46 2.44
74 75 6.207213 TCAATGCACCGTATTTTTACGTTTT 58.793 32.000 0.00 0.00 41.46 2.43
75 76 5.759963 TCAATGCACCGTATTTTTACGTTT 58.240 33.333 0.00 0.00 41.46 3.60
76 77 5.359716 TCAATGCACCGTATTTTTACGTT 57.640 34.783 0.00 0.00 41.46 3.99
77 78 5.106475 ACATCAATGCACCGTATTTTTACGT 60.106 36.000 0.00 0.00 41.46 3.57
78 79 5.328691 ACATCAATGCACCGTATTTTTACG 58.671 37.500 0.00 0.00 42.56 3.18
79 80 6.318628 TGACATCAATGCACCGTATTTTTAC 58.681 36.000 0.00 0.00 0.00 2.01
80 81 6.502136 TGACATCAATGCACCGTATTTTTA 57.498 33.333 0.00 0.00 0.00 1.52
81 82 5.384063 TGACATCAATGCACCGTATTTTT 57.616 34.783 0.00 0.00 0.00 1.94
82 83 5.384063 TTGACATCAATGCACCGTATTTT 57.616 34.783 0.00 0.00 0.00 1.82
83 84 5.384063 TTTGACATCAATGCACCGTATTT 57.616 34.783 0.00 0.00 35.55 1.40
84 85 5.384063 TTTTGACATCAATGCACCGTATT 57.616 34.783 0.00 0.00 35.55 1.89
85 86 5.581126 ATTTTGACATCAATGCACCGTAT 57.419 34.783 0.00 0.00 35.55 3.06
86 87 5.877564 TCTATTTTGACATCAATGCACCGTA 59.122 36.000 0.00 0.00 35.55 4.02
87 88 3.940209 ATTTTGACATCAATGCACCGT 57.060 38.095 0.00 0.00 35.55 4.83
88 89 5.065090 TCTCTATTTTGACATCAATGCACCG 59.935 40.000 0.00 0.00 35.55 4.94
89 90 6.441093 TCTCTATTTTGACATCAATGCACC 57.559 37.500 0.00 0.00 35.55 5.01
90 91 6.459298 CCCTCTCTATTTTGACATCAATGCAC 60.459 42.308 0.00 0.00 35.55 4.57
91 92 5.591472 CCCTCTCTATTTTGACATCAATGCA 59.409 40.000 0.00 0.00 35.55 3.96
92 93 5.009410 CCCCTCTCTATTTTGACATCAATGC 59.991 44.000 0.00 0.00 35.55 3.56
93 94 5.533903 CCCCCTCTCTATTTTGACATCAATG 59.466 44.000 0.00 0.00 35.55 2.82
94 95 5.194537 ACCCCCTCTCTATTTTGACATCAAT 59.805 40.000 0.00 0.00 35.55 2.57
95 96 4.540099 ACCCCCTCTCTATTTTGACATCAA 59.460 41.667 0.00 0.00 0.00 2.57
96 97 4.080356 CACCCCCTCTCTATTTTGACATCA 60.080 45.833 0.00 0.00 0.00 3.07
97 98 4.080299 ACACCCCCTCTCTATTTTGACATC 60.080 45.833 0.00 0.00 0.00 3.06
98 99 3.852578 ACACCCCCTCTCTATTTTGACAT 59.147 43.478 0.00 0.00 0.00 3.06
99 100 3.256704 ACACCCCCTCTCTATTTTGACA 58.743 45.455 0.00 0.00 0.00 3.58
100 101 3.679083 CGACACCCCCTCTCTATTTTGAC 60.679 52.174 0.00 0.00 0.00 3.18
101 102 2.500098 CGACACCCCCTCTCTATTTTGA 59.500 50.000 0.00 0.00 0.00 2.69
102 103 2.906354 CGACACCCCCTCTCTATTTTG 58.094 52.381 0.00 0.00 0.00 2.44
103 104 1.209747 GCGACACCCCCTCTCTATTTT 59.790 52.381 0.00 0.00 0.00 1.82
104 105 0.831307 GCGACACCCCCTCTCTATTT 59.169 55.000 0.00 0.00 0.00 1.40
105 106 1.392710 CGCGACACCCCCTCTCTATT 61.393 60.000 0.00 0.00 0.00 1.73
106 107 1.828660 CGCGACACCCCCTCTCTAT 60.829 63.158 0.00 0.00 0.00 1.98
107 108 2.439701 CGCGACACCCCCTCTCTA 60.440 66.667 0.00 0.00 0.00 2.43
110 111 4.753662 TAGCGCGACACCCCCTCT 62.754 66.667 12.10 0.00 0.00 3.69
111 112 2.973180 GAATAGCGCGACACCCCCTC 62.973 65.000 12.10 0.00 0.00 4.30
112 113 3.081409 AATAGCGCGACACCCCCT 61.081 61.111 12.10 0.00 0.00 4.79
113 114 2.588034 GAATAGCGCGACACCCCC 60.588 66.667 12.10 0.00 0.00 5.40
114 115 2.960129 CGAATAGCGCGACACCCC 60.960 66.667 12.10 0.00 0.00 4.95
115 116 2.202703 ACGAATAGCGCGACACCC 60.203 61.111 12.10 0.00 46.04 4.61
116 117 1.515519 TGACGAATAGCGCGACACC 60.516 57.895 12.10 0.00 46.04 4.16
117 118 1.624323 GTGACGAATAGCGCGACAC 59.376 57.895 12.10 0.00 46.04 3.67
118 119 1.515519 GGTGACGAATAGCGCGACA 60.516 57.895 12.10 0.00 46.04 4.35
119 120 2.228914 GGGTGACGAATAGCGCGAC 61.229 63.158 12.10 0.04 46.04 5.19
120 121 2.103538 GGGTGACGAATAGCGCGA 59.896 61.111 12.10 0.00 46.04 5.87
121 122 2.104331 AGGGTGACGAATAGCGCG 59.896 61.111 0.00 0.00 46.04 6.86
122 123 1.883084 CCAGGGTGACGAATAGCGC 60.883 63.158 0.00 0.00 46.04 5.92
123 124 1.956629 ACCCAGGGTGACGAATAGCG 61.957 60.000 11.70 0.00 39.57 4.26
124 125 1.905512 ACCCAGGGTGACGAATAGC 59.094 57.895 11.70 0.00 32.98 2.97
131 132 9.736671 GAATAACTATTCCTCACCCAGGGTGAC 62.737 48.148 34.62 17.53 44.45 3.67
132 133 7.827072 GAATAACTATTCCTCACCCAGGGTGA 61.827 46.154 35.32 35.32 45.54 4.02
133 134 5.687706 GAATAACTATTCCTCACCCAGGGTG 60.688 48.000 31.06 31.06 43.50 4.61
134 135 2.361085 AACTATTCCTCACCCAGGGT 57.639 50.000 4.76 4.76 43.67 4.34
135 136 4.660771 AGAATAACTATTCCTCACCCAGGG 59.339 45.833 2.85 2.85 43.67 4.45
136 137 5.896073 AGAATAACTATTCCTCACCCAGG 57.104 43.478 5.95 0.00 42.29 4.45
137 138 6.889198 TGAAGAATAACTATTCCTCACCCAG 58.111 40.000 6.65 0.00 42.29 4.45
138 139 6.884472 TGAAGAATAACTATTCCTCACCCA 57.116 37.500 6.65 0.00 42.29 4.51
142 143 5.132144 GGGGGTGAAGAATAACTATTCCTCA 59.868 44.000 6.65 6.65 42.29 3.86
143 144 5.369993 AGGGGGTGAAGAATAACTATTCCTC 59.630 44.000 5.95 4.07 42.29 3.71
144 145 5.297799 AGGGGGTGAAGAATAACTATTCCT 58.702 41.667 5.95 0.00 42.29 3.36
145 146 5.369993 AGAGGGGGTGAAGAATAACTATTCC 59.630 44.000 5.95 0.00 42.29 3.01
146 147 6.502074 AGAGGGGGTGAAGAATAACTATTC 57.498 41.667 1.83 1.83 41.78 1.75
147 148 8.582891 AATAGAGGGGGTGAAGAATAACTATT 57.417 34.615 0.00 0.00 0.00 1.73
148 149 8.582891 AAATAGAGGGGGTGAAGAATAACTAT 57.417 34.615 0.00 0.00 0.00 2.12
149 150 8.272173 CAAAATAGAGGGGGTGAAGAATAACTA 58.728 37.037 0.00 0.00 0.00 2.24
150 151 6.910259 AAATAGAGGGGGTGAAGAATAACT 57.090 37.500 0.00 0.00 0.00 2.24
151 152 7.067129 GTCAAAATAGAGGGGGTGAAGAATAAC 59.933 40.741 0.00 0.00 0.00 1.89
152 153 7.116736 GTCAAAATAGAGGGGGTGAAGAATAA 58.883 38.462 0.00 0.00 0.00 1.40
153 154 6.216662 TGTCAAAATAGAGGGGGTGAAGAATA 59.783 38.462 0.00 0.00 0.00 1.75
154 155 5.015178 TGTCAAAATAGAGGGGGTGAAGAAT 59.985 40.000 0.00 0.00 0.00 2.40
155 156 4.352595 TGTCAAAATAGAGGGGGTGAAGAA 59.647 41.667 0.00 0.00 0.00 2.52
156 157 3.913799 TGTCAAAATAGAGGGGGTGAAGA 59.086 43.478 0.00 0.00 0.00 2.87
157 158 4.301072 TGTCAAAATAGAGGGGGTGAAG 57.699 45.455 0.00 0.00 0.00 3.02
158 159 4.290985 TGATGTCAAAATAGAGGGGGTGAA 59.709 41.667 0.00 0.00 0.00 3.18
159 160 3.849574 TGATGTCAAAATAGAGGGGGTGA 59.150 43.478 0.00 0.00 0.00 4.02
160 161 4.235079 TGATGTCAAAATAGAGGGGGTG 57.765 45.455 0.00 0.00 0.00 4.61
161 162 4.946160 TTGATGTCAAAATAGAGGGGGT 57.054 40.909 0.00 0.00 32.11 4.95
162 163 4.038402 GCATTGATGTCAAAATAGAGGGGG 59.962 45.833 0.00 0.00 39.55 5.40
163 164 4.646040 TGCATTGATGTCAAAATAGAGGGG 59.354 41.667 0.00 0.00 39.55 4.79
164 165 5.450965 GGTGCATTGATGTCAAAATAGAGGG 60.451 44.000 0.00 0.00 39.55 4.30
165 166 5.585390 GGTGCATTGATGTCAAAATAGAGG 58.415 41.667 0.00 0.00 39.55 3.69
166 167 5.163723 ACGGTGCATTGATGTCAAAATAGAG 60.164 40.000 0.00 0.00 39.55 2.43
167 168 4.699735 ACGGTGCATTGATGTCAAAATAGA 59.300 37.500 0.00 0.00 39.55 1.98
168 169 4.985413 ACGGTGCATTGATGTCAAAATAG 58.015 39.130 0.00 0.00 39.55 1.73
169 170 6.691754 ATACGGTGCATTGATGTCAAAATA 57.308 33.333 0.00 0.00 39.55 1.40
170 171 3.940209 ACGGTGCATTGATGTCAAAAT 57.060 38.095 0.00 0.00 39.55 1.82
171 172 5.384063 AATACGGTGCATTGATGTCAAAA 57.616 34.783 0.00 0.00 39.55 2.44
172 173 5.384063 AAATACGGTGCATTGATGTCAAA 57.616 34.783 0.00 0.00 39.55 2.69
173 174 5.384063 AAAATACGGTGCATTGATGTCAA 57.616 34.783 0.00 0.00 40.51 3.18
174 175 5.384063 AAAAATACGGTGCATTGATGTCA 57.616 34.783 0.00 0.00 0.00 3.58
175 176 5.451023 CGTAAAAATACGGTGCATTGATGTC 59.549 40.000 0.00 0.00 39.56 3.06
176 177 5.106475 ACGTAAAAATACGGTGCATTGATGT 60.106 36.000 12.37 0.00 46.68 3.06
177 178 5.328691 ACGTAAAAATACGGTGCATTGATG 58.671 37.500 12.37 0.00 46.68 3.07
178 179 5.554822 ACGTAAAAATACGGTGCATTGAT 57.445 34.783 12.37 0.00 46.68 2.57
179 180 5.359716 AACGTAAAAATACGGTGCATTGA 57.640 34.783 12.37 0.00 46.68 2.57
180 181 6.074782 ACAAAACGTAAAAATACGGTGCATTG 60.075 34.615 12.37 9.64 43.24 2.82
181 182 5.978322 ACAAAACGTAAAAATACGGTGCATT 59.022 32.000 12.37 0.00 43.24 3.56
182 183 5.521544 ACAAAACGTAAAAATACGGTGCAT 58.478 33.333 12.37 0.00 43.24 3.96
183 184 4.918037 ACAAAACGTAAAAATACGGTGCA 58.082 34.783 12.37 0.00 43.24 4.57
184 185 6.966340 TTACAAAACGTAAAAATACGGTGC 57.034 33.333 12.37 0.00 43.24 5.01
232 233 8.378421 GCGAGTACATATTTTCTTACGTTCTTT 58.622 33.333 0.00 0.00 0.00 2.52
233 234 7.009907 GGCGAGTACATATTTTCTTACGTTCTT 59.990 37.037 0.00 0.00 0.00 2.52
234 235 6.474751 GGCGAGTACATATTTTCTTACGTTCT 59.525 38.462 0.00 0.00 0.00 3.01
235 236 6.559158 CGGCGAGTACATATTTTCTTACGTTC 60.559 42.308 0.00 0.00 0.00 3.95
236 237 5.230726 CGGCGAGTACATATTTTCTTACGTT 59.769 40.000 0.00 0.00 0.00 3.99
237 238 4.736793 CGGCGAGTACATATTTTCTTACGT 59.263 41.667 0.00 0.00 0.00 3.57
238 239 4.736793 ACGGCGAGTACATATTTTCTTACG 59.263 41.667 16.62 0.00 0.00 3.18
239 240 7.684062 TTACGGCGAGTACATATTTTCTTAC 57.316 36.000 16.62 0.00 34.56 2.34
240 241 8.700722 TTTTACGGCGAGTACATATTTTCTTA 57.299 30.769 16.62 0.00 34.56 2.10
241 242 7.599630 TTTTACGGCGAGTACATATTTTCTT 57.400 32.000 16.62 0.00 34.56 2.52
242 243 7.599630 TTTTTACGGCGAGTACATATTTTCT 57.400 32.000 16.62 0.00 34.56 2.52
406 407 9.374838 ACGATCACTTCCTAAATAAATTACGTT 57.625 29.630 0.00 0.00 0.00 3.99
407 408 8.937634 ACGATCACTTCCTAAATAAATTACGT 57.062 30.769 0.00 0.00 0.00 3.57
416 417 8.925338 AGGTAATCTTACGATCACTTCCTAAAT 58.075 33.333 0.00 0.00 34.50 1.40
417 418 8.302515 AGGTAATCTTACGATCACTTCCTAAA 57.697 34.615 0.00 0.00 34.50 1.85
418 419 7.255035 CGAGGTAATCTTACGATCACTTCCTAA 60.255 40.741 0.00 0.00 34.50 2.69
419 420 6.204301 CGAGGTAATCTTACGATCACTTCCTA 59.796 42.308 0.00 0.00 34.50 2.94
420 421 5.008811 CGAGGTAATCTTACGATCACTTCCT 59.991 44.000 0.00 0.00 34.50 3.36
421 422 5.213675 CGAGGTAATCTTACGATCACTTCC 58.786 45.833 0.00 0.00 34.50 3.46
422 423 5.213675 CCGAGGTAATCTTACGATCACTTC 58.786 45.833 0.00 0.00 34.50 3.01
423 424 4.037684 CCCGAGGTAATCTTACGATCACTT 59.962 45.833 0.00 0.00 34.50 3.16
424 425 3.568853 CCCGAGGTAATCTTACGATCACT 59.431 47.826 0.00 0.00 34.50 3.41
425 426 3.317430 ACCCGAGGTAATCTTACGATCAC 59.683 47.826 0.00 0.00 32.11 3.06
426 427 3.317149 CACCCGAGGTAATCTTACGATCA 59.683 47.826 0.00 0.00 32.11 2.92
427 428 3.567164 TCACCCGAGGTAATCTTACGATC 59.433 47.826 0.00 0.00 32.11 3.69
428 429 3.559069 TCACCCGAGGTAATCTTACGAT 58.441 45.455 0.00 0.00 32.11 3.73
429 430 3.003394 TCACCCGAGGTAATCTTACGA 57.997 47.619 0.00 0.00 32.11 3.43
430 431 3.379372 TCTTCACCCGAGGTAATCTTACG 59.621 47.826 0.00 0.00 32.11 3.18
431 432 4.996788 TCTTCACCCGAGGTAATCTTAC 57.003 45.455 0.00 0.00 32.11 2.34
432 433 7.343833 AGTTATTCTTCACCCGAGGTAATCTTA 59.656 37.037 0.00 0.00 32.11 2.10
433 434 6.156429 AGTTATTCTTCACCCGAGGTAATCTT 59.844 38.462 0.00 0.00 32.11 2.40
434 435 5.661759 AGTTATTCTTCACCCGAGGTAATCT 59.338 40.000 0.00 0.00 32.11 2.40
435 436 5.915175 AGTTATTCTTCACCCGAGGTAATC 58.085 41.667 0.00 0.00 32.11 1.75
436 437 5.952347 AGTTATTCTTCACCCGAGGTAAT 57.048 39.130 0.00 0.00 32.11 1.89
437 438 5.750352 AAGTTATTCTTCACCCGAGGTAA 57.250 39.130 0.00 0.00 32.11 2.85
438 439 7.427989 AATAAGTTATTCTTCACCCGAGGTA 57.572 36.000 2.10 0.00 37.56 3.08
439 440 5.952347 ATAAGTTATTCTTCACCCGAGGT 57.048 39.130 0.00 0.00 37.56 3.85
440 441 6.846325 GAATAAGTTATTCTTCACCCGAGG 57.154 41.667 22.93 0.00 41.00 4.63
451 452 6.016777 CACCCAGGATGCAGAATAAGTTATTC 60.017 42.308 22.80 22.80 39.03 1.75
452 453 5.829924 CACCCAGGATGCAGAATAAGTTATT 59.170 40.000 7.87 7.87 31.97 1.40
453 454 5.132648 TCACCCAGGATGCAGAATAAGTTAT 59.867 40.000 0.00 0.00 31.97 1.89
454 455 4.473196 TCACCCAGGATGCAGAATAAGTTA 59.527 41.667 0.00 0.00 31.97 2.24
455 456 3.266772 TCACCCAGGATGCAGAATAAGTT 59.733 43.478 0.00 0.00 31.97 2.66
456 457 2.846206 TCACCCAGGATGCAGAATAAGT 59.154 45.455 0.00 0.00 31.97 2.24
457 458 3.565764 TCACCCAGGATGCAGAATAAG 57.434 47.619 0.00 0.00 31.97 1.73
458 459 3.459227 TCATCACCCAGGATGCAGAATAA 59.541 43.478 0.00 0.00 43.44 1.40
459 460 3.047857 TCATCACCCAGGATGCAGAATA 58.952 45.455 0.00 0.00 43.44 1.75
460 461 1.848388 TCATCACCCAGGATGCAGAAT 59.152 47.619 0.00 0.00 43.44 2.40
461 462 1.288188 TCATCACCCAGGATGCAGAA 58.712 50.000 0.00 0.00 43.44 3.02
462 463 1.288188 TTCATCACCCAGGATGCAGA 58.712 50.000 0.00 0.00 43.44 4.26
463 464 2.359981 ATTCATCACCCAGGATGCAG 57.640 50.000 0.00 0.00 43.44 4.41
464 465 2.779430 ACTATTCATCACCCAGGATGCA 59.221 45.455 0.00 0.00 43.44 3.96
465 466 3.498774 ACTATTCATCACCCAGGATGC 57.501 47.619 0.00 0.00 43.44 3.91
466 467 5.760253 GTGTTACTATTCATCACCCAGGATG 59.240 44.000 0.00 0.00 44.78 3.51
467 468 5.667626 AGTGTTACTATTCATCACCCAGGAT 59.332 40.000 0.00 0.00 0.00 3.24
468 469 5.030147 AGTGTTACTATTCATCACCCAGGA 58.970 41.667 0.00 0.00 0.00 3.86
469 470 5.359194 AGTGTTACTATTCATCACCCAGG 57.641 43.478 0.00 0.00 0.00 4.45
494 495 9.542462 GAAAGGTGTGTGTGTGTGTATATATAT 57.458 33.333 0.00 0.00 0.00 0.86
495 496 8.755028 AGAAAGGTGTGTGTGTGTGTATATATA 58.245 33.333 0.00 0.00 0.00 0.86
496 497 7.620880 AGAAAGGTGTGTGTGTGTGTATATAT 58.379 34.615 0.00 0.00 0.00 0.86
497 498 6.999950 AGAAAGGTGTGTGTGTGTGTATATA 58.000 36.000 0.00 0.00 0.00 0.86
498 499 5.865085 AGAAAGGTGTGTGTGTGTGTATAT 58.135 37.500 0.00 0.00 0.00 0.86
499 500 5.163395 TGAGAAAGGTGTGTGTGTGTGTATA 60.163 40.000 0.00 0.00 0.00 1.47
500 501 4.127171 GAGAAAGGTGTGTGTGTGTGTAT 58.873 43.478 0.00 0.00 0.00 2.29
501 502 3.055747 TGAGAAAGGTGTGTGTGTGTGTA 60.056 43.478 0.00 0.00 0.00 2.90
502 503 2.290008 TGAGAAAGGTGTGTGTGTGTGT 60.290 45.455 0.00 0.00 0.00 3.72
503 504 2.355197 TGAGAAAGGTGTGTGTGTGTG 58.645 47.619 0.00 0.00 0.00 3.82
504 505 2.779755 TGAGAAAGGTGTGTGTGTGT 57.220 45.000 0.00 0.00 0.00 3.72
505 506 3.184379 CGTATGAGAAAGGTGTGTGTGTG 59.816 47.826 0.00 0.00 0.00 3.82
506 507 3.390135 CGTATGAGAAAGGTGTGTGTGT 58.610 45.455 0.00 0.00 0.00 3.72
507 508 2.736721 CCGTATGAGAAAGGTGTGTGTG 59.263 50.000 0.00 0.00 0.00 3.82
508 509 2.367567 ACCGTATGAGAAAGGTGTGTGT 59.632 45.455 0.00 0.00 35.36 3.72
509 510 3.040147 ACCGTATGAGAAAGGTGTGTG 57.960 47.619 0.00 0.00 35.36 3.82
510 511 3.764237 AACCGTATGAGAAAGGTGTGT 57.236 42.857 0.00 0.00 37.03 3.72
511 512 6.403200 CCATAAAACCGTATGAGAAAGGTGTG 60.403 42.308 0.00 0.00 37.03 3.82
512 513 5.646360 CCATAAAACCGTATGAGAAAGGTGT 59.354 40.000 0.00 0.00 37.03 4.16
513 514 5.646360 ACCATAAAACCGTATGAGAAAGGTG 59.354 40.000 0.00 0.00 37.03 4.00
519 520 5.394883 GGAGACACCATAAAACCGTATGAGA 60.395 44.000 0.00 0.00 38.79 3.27
542 543 9.933723 AACTCTGATGAAATCCTTTTAAATTGG 57.066 29.630 0.00 0.00 44.73 3.16
645 649 8.931568 TCCTTTAAACTGTAGGAAAGTAGTTCT 58.068 33.333 0.00 0.00 35.20 3.01
646 650 9.551734 TTCCTTTAAACTGTAGGAAAGTAGTTC 57.448 33.333 7.20 0.00 43.25 3.01
743 1488 2.161609 GGTGTGTGCCATAGCTGTAAAC 59.838 50.000 0.00 0.00 40.80 2.01
788 1533 8.844244 AGAACAAATTTATCTGCATCATAGGAC 58.156 33.333 5.19 0.00 0.00 3.85
825 1600 8.707938 AAATAAATCCTGCAGCTATCAAAAAC 57.292 30.769 8.66 0.00 0.00 2.43
831 1606 8.020244 GCTCTAAAAATAAATCCTGCAGCTATC 58.980 37.037 8.66 0.00 0.00 2.08
835 1610 5.894807 TGCTCTAAAAATAAATCCTGCAGC 58.105 37.500 8.66 0.00 0.00 5.25
868 1643 8.844244 CAGAGTTCCAAATCAATAAGGAATAGG 58.156 37.037 0.00 0.00 41.71 2.57
1007 1793 1.278413 GTAAAGGGAGGAGGTGGTGAC 59.722 57.143 0.00 0.00 0.00 3.67
1421 2207 4.261197 CCGCAATAACCAGAGGAAATTAGC 60.261 45.833 0.00 0.00 0.00 3.09
1436 2222 0.472471 CCCCTTCTAGCCCGCAATAA 59.528 55.000 0.00 0.00 0.00 1.40
1447 2233 1.304891 CCAAATCCCACCCCCTTCTA 58.695 55.000 0.00 0.00 0.00 2.10
1526 2312 4.101942 TCAATGACGCTGTCAAAACAAAC 58.898 39.130 13.81 0.00 45.96 2.93
1541 2327 6.789262 AGTGCTAGCATACAAATTCAATGAC 58.211 36.000 22.51 1.48 0.00 3.06
1590 2376 2.825836 CACGATCCAAGCCAGGGC 60.826 66.667 0.97 0.97 42.33 5.19
1592 2378 0.742281 CTCACACGATCCAAGCCAGG 60.742 60.000 0.00 0.00 0.00 4.45
1593 2379 0.036952 ACTCACACGATCCAAGCCAG 60.037 55.000 0.00 0.00 0.00 4.85
1594 2380 0.396435 AACTCACACGATCCAAGCCA 59.604 50.000 0.00 0.00 0.00 4.75
1595 2381 1.079503 GAACTCACACGATCCAAGCC 58.920 55.000 0.00 0.00 0.00 4.35
1596 2382 0.716108 CGAACTCACACGATCCAAGC 59.284 55.000 0.00 0.00 0.00 4.01
1597 2383 1.336887 ACCGAACTCACACGATCCAAG 60.337 52.381 0.00 0.00 0.00 3.61
1598 2384 0.677288 ACCGAACTCACACGATCCAA 59.323 50.000 0.00 0.00 0.00 3.53
1621 2436 1.217882 ACTGAAGGTCGCGTTTCTTG 58.782 50.000 5.77 8.81 0.00 3.02
1637 2452 7.941919 TCATAAGGCATACAAGAGTACTACTG 58.058 38.462 0.00 0.00 31.96 2.74
1771 2586 7.557358 AGACAATACCATGAATATGCAAACTCA 59.443 33.333 0.00 0.00 32.79 3.41
1791 2606 6.656902 TCCAGCTTGATTTGATAGAGACAAT 58.343 36.000 0.00 0.00 0.00 2.71
1806 2623 3.753272 CCGAGAAGAAATTTCCAGCTTGA 59.247 43.478 14.61 0.00 0.00 3.02
1857 2674 8.560124 AGAATACTCTCAGTGGAAAAGGATAT 57.440 34.615 0.00 0.00 0.00 1.63
1947 2764 6.889301 TGAAGAAGTCAAAGAATTGCAGAT 57.111 33.333 0.00 0.00 36.45 2.90
1986 2803 3.504863 GCCATGTGCAGTAAACTGATTG 58.495 45.455 14.21 5.04 46.59 2.67
1998 2815 6.151817 TGTAAGTAATACAATTGCCATGTGCA 59.848 34.615 5.05 4.93 44.40 4.57
2003 2820 7.938140 ACTGTGTAAGTAATACAATTGCCAT 57.062 32.000 5.05 0.00 45.81 4.40
2028 2845 5.134725 AGTATTTAGGAACGGAGGGAGTA 57.865 43.478 0.00 0.00 0.00 2.59
2029 2846 3.991683 AGTATTTAGGAACGGAGGGAGT 58.008 45.455 0.00 0.00 0.00 3.85
2030 2847 4.161754 ACAAGTATTTAGGAACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
2031 2848 4.098894 ACAAGTATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
2032 2849 4.161754 AGACAAGTATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
2033 2850 5.340439 AGACAAGTATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
2034 2851 7.097834 AGAAAGACAAGTATTTAGGAACGGAG 58.902 38.462 0.00 0.00 0.00 4.63
2035 2852 7.001099 AGAAAGACAAGTATTTAGGAACGGA 57.999 36.000 0.00 0.00 0.00 4.69
2036 2853 7.491696 CCTAGAAAGACAAGTATTTAGGAACGG 59.508 40.741 4.01 0.00 26.70 4.44
2037 2854 7.010275 GCCTAGAAAGACAAGTATTTAGGAACG 59.990 40.741 11.40 0.00 26.70 3.95
2038 2855 7.822822 TGCCTAGAAAGACAAGTATTTAGGAAC 59.177 37.037 11.40 0.00 26.70 3.62
2039 2856 7.913789 TGCCTAGAAAGACAAGTATTTAGGAA 58.086 34.615 11.40 1.02 26.70 3.36
2040 2857 7.490657 TGCCTAGAAAGACAAGTATTTAGGA 57.509 36.000 11.40 0.00 26.70 2.94
2041 2858 8.738645 AATGCCTAGAAAGACAAGTATTTAGG 57.261 34.615 5.26 5.26 0.00 2.69
2043 2860 9.733556 TGAAATGCCTAGAAAGACAAGTATTTA 57.266 29.630 0.00 0.00 0.00 1.40
2044 2861 8.635765 TGAAATGCCTAGAAAGACAAGTATTT 57.364 30.769 0.00 0.00 0.00 1.40
2045 2862 8.635765 TTGAAATGCCTAGAAAGACAAGTATT 57.364 30.769 0.00 0.00 0.00 1.89
2046 2863 8.635765 TTTGAAATGCCTAGAAAGACAAGTAT 57.364 30.769 0.00 0.00 0.00 2.12
2047 2864 8.514594 CATTTGAAATGCCTAGAAAGACAAGTA 58.485 33.333 4.82 0.00 0.00 2.24
2048 2865 6.959639 TTTGAAATGCCTAGAAAGACAAGT 57.040 33.333 0.00 0.00 0.00 3.16
2049 2866 7.540055 GTCATTTGAAATGCCTAGAAAGACAAG 59.460 37.037 12.86 0.00 0.00 3.16
2050 2867 7.231317 AGTCATTTGAAATGCCTAGAAAGACAA 59.769 33.333 12.86 0.00 0.00 3.18
2051 2868 6.716628 AGTCATTTGAAATGCCTAGAAAGACA 59.283 34.615 12.86 0.00 0.00 3.41
2052 2869 7.150783 AGTCATTTGAAATGCCTAGAAAGAC 57.849 36.000 12.86 3.23 0.00 3.01
2053 2870 9.113838 GATAGTCATTTGAAATGCCTAGAAAGA 57.886 33.333 13.20 0.00 0.00 2.52
2054 2871 8.896744 TGATAGTCATTTGAAATGCCTAGAAAG 58.103 33.333 13.20 0.00 0.00 2.62
2055 2872 8.677300 GTGATAGTCATTTGAAATGCCTAGAAA 58.323 33.333 13.20 0.91 0.00 2.52
2056 2873 7.828717 TGTGATAGTCATTTGAAATGCCTAGAA 59.171 33.333 13.20 2.99 0.00 2.10
2057 2874 7.337938 TGTGATAGTCATTTGAAATGCCTAGA 58.662 34.615 13.20 1.78 0.00 2.43
2058 2875 7.558161 TGTGATAGTCATTTGAAATGCCTAG 57.442 36.000 13.20 0.00 0.00 3.02
2059 2876 9.056005 GTATGTGATAGTCATTTGAAATGCCTA 57.944 33.333 10.59 10.59 0.00 3.93
2060 2877 7.254898 CGTATGTGATAGTCATTTGAAATGCCT 60.255 37.037 12.86 9.73 0.00 4.75
2061 2878 6.852853 CGTATGTGATAGTCATTTGAAATGCC 59.147 38.462 12.86 1.61 0.00 4.40
2062 2879 6.852853 CCGTATGTGATAGTCATTTGAAATGC 59.147 38.462 12.86 8.33 0.00 3.56
2063 2880 8.141835 TCCGTATGTGATAGTCATTTGAAATG 57.858 34.615 11.54 11.54 0.00 2.32
2064 2881 8.777413 CATCCGTATGTGATAGTCATTTGAAAT 58.223 33.333 0.00 0.00 0.00 2.17
2065 2882 7.768582 ACATCCGTATGTGATAGTCATTTGAAA 59.231 33.333 0.00 0.00 44.79 2.69
2066 2883 7.272244 ACATCCGTATGTGATAGTCATTTGAA 58.728 34.615 0.00 0.00 44.79 2.69
2067 2884 6.816136 ACATCCGTATGTGATAGTCATTTGA 58.184 36.000 0.00 0.00 44.79 2.69
2068 2885 8.650714 CATACATCCGTATGTGATAGTCATTTG 58.349 37.037 3.56 0.00 46.70 2.32
2069 2886 8.763049 CATACATCCGTATGTGATAGTCATTT 57.237 34.615 3.56 0.00 46.70 2.32
2110 2927 6.812160 ACGGAGTAAAATGAGTGAATCTACAC 59.188 38.462 0.00 0.00 41.94 2.90
2111 2928 6.931838 ACGGAGTAAAATGAGTGAATCTACA 58.068 36.000 0.00 0.00 41.94 2.74
2127 2944 7.255555 TTCAACAAGTGACTACATACGGAGTAA 60.256 37.037 0.00 0.00 41.03 2.24
2128 2945 6.207221 TTCAACAAGTGACTACATACGGAGTA 59.793 38.462 0.00 0.00 41.66 2.59
2129 2946 5.010314 TTCAACAAGTGACTACATACGGAGT 59.990 40.000 0.00 0.00 39.84 3.85
2130 2947 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
2131 2948 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
2132 2949 6.534059 CATTTCAACAAGTGACTACATACGG 58.466 40.000 0.00 0.00 35.39 4.02
2133 2950 6.015504 GCATTTCAACAAGTGACTACATACG 58.984 40.000 0.00 0.00 35.39 3.06
2134 2951 6.149474 AGGCATTTCAACAAGTGACTACATAC 59.851 38.462 0.00 0.00 35.84 2.39
2135 2952 6.237901 AGGCATTTCAACAAGTGACTACATA 58.762 36.000 0.00 0.00 35.84 2.29
2136 2953 5.072741 AGGCATTTCAACAAGTGACTACAT 58.927 37.500 0.00 0.00 35.84 2.29
2137 2954 4.460263 AGGCATTTCAACAAGTGACTACA 58.540 39.130 0.00 0.00 35.84 2.74
2138 2955 6.554334 TTAGGCATTTCAACAAGTGACTAC 57.446 37.500 0.00 0.00 39.07 2.73
2139 2956 7.575414 TTTTAGGCATTTCAACAAGTGACTA 57.425 32.000 0.00 0.00 38.51 2.59
2140 2957 6.463995 TTTTAGGCATTTCAACAAGTGACT 57.536 33.333 0.00 0.00 40.60 3.41
2141 2958 6.978080 TCTTTTTAGGCATTTCAACAAGTGAC 59.022 34.615 0.00 0.00 35.39 3.67
2142 2959 6.978080 GTCTTTTTAGGCATTTCAACAAGTGA 59.022 34.615 0.00 0.00 0.00 3.41
2143 2960 6.756074 TGTCTTTTTAGGCATTTCAACAAGTG 59.244 34.615 0.00 0.00 0.00 3.16
2144 2961 6.872920 TGTCTTTTTAGGCATTTCAACAAGT 58.127 32.000 0.00 0.00 0.00 3.16
2145 2962 7.492344 ACTTGTCTTTTTAGGCATTTCAACAAG 59.508 33.333 0.00 0.00 43.26 3.16
2146 2963 7.327214 ACTTGTCTTTTTAGGCATTTCAACAA 58.673 30.769 0.00 0.00 0.00 2.83
2147 2964 6.872920 ACTTGTCTTTTTAGGCATTTCAACA 58.127 32.000 0.00 0.00 0.00 3.33
2148 2965 9.476202 AATACTTGTCTTTTTAGGCATTTCAAC 57.524 29.630 0.00 0.00 0.00 3.18
2153 2970 9.528489 TCCTAAATACTTGTCTTTTTAGGCATT 57.472 29.630 13.09 0.00 45.31 3.56
2154 2971 9.528489 TTCCTAAATACTTGTCTTTTTAGGCAT 57.472 29.630 13.09 0.00 45.31 4.40
2155 2972 8.789762 GTTCCTAAATACTTGTCTTTTTAGGCA 58.210 33.333 13.09 2.93 45.31 4.75
2156 2973 7.961283 CGTTCCTAAATACTTGTCTTTTTAGGC 59.039 37.037 13.09 3.06 45.31 3.93
2157 2974 8.448615 CCGTTCCTAAATACTTGTCTTTTTAGG 58.551 37.037 12.11 12.11 46.30 2.69
2158 2975 9.211485 TCCGTTCCTAAATACTTGTCTTTTTAG 57.789 33.333 0.00 0.00 33.47 1.85
2159 2976 9.211485 CTCCGTTCCTAAATACTTGTCTTTTTA 57.789 33.333 0.00 0.00 0.00 1.52
2160 2977 7.174426 CCTCCGTTCCTAAATACTTGTCTTTTT 59.826 37.037 0.00 0.00 0.00 1.94
2161 2978 6.653740 CCTCCGTTCCTAAATACTTGTCTTTT 59.346 38.462 0.00 0.00 0.00 2.27
2162 2979 6.171213 CCTCCGTTCCTAAATACTTGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
2163 2980 5.338137 CCCTCCGTTCCTAAATACTTGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
2164 2981 4.161754 CCCTCCGTTCCTAAATACTTGTCT 59.838 45.833 0.00 0.00 0.00 3.41
2165 2982 4.161001 TCCCTCCGTTCCTAAATACTTGTC 59.839 45.833 0.00 0.00 0.00 3.18
2166 2983 4.098894 TCCCTCCGTTCCTAAATACTTGT 58.901 43.478 0.00 0.00 0.00 3.16
2167 2984 4.161754 ACTCCCTCCGTTCCTAAATACTTG 59.838 45.833 0.00 0.00 0.00 3.16
2168 2985 4.359996 ACTCCCTCCGTTCCTAAATACTT 58.640 43.478 0.00 0.00 0.00 2.24
2169 2986 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
2170 2987 4.892345 AGTACTCCCTCCGTTCCTAAATAC 59.108 45.833 0.00 0.00 0.00 1.89
2171 2988 5.103771 AGAGTACTCCCTCCGTTCCTAAATA 60.104 44.000 19.38 0.00 31.53 1.40
2172 2989 3.959449 GAGTACTCCCTCCGTTCCTAAAT 59.041 47.826 12.13 0.00 0.00 1.40
2173 2990 3.011032 AGAGTACTCCCTCCGTTCCTAAA 59.989 47.826 19.38 0.00 31.53 1.85
2174 2991 2.579860 AGAGTACTCCCTCCGTTCCTAA 59.420 50.000 19.38 0.00 31.53 2.69
2175 2992 2.203584 AGAGTACTCCCTCCGTTCCTA 58.796 52.381 19.38 0.00 31.53 2.94
2176 2993 1.001282 AGAGTACTCCCTCCGTTCCT 58.999 55.000 19.38 0.00 31.53 3.36
2177 2994 1.849977 AAGAGTACTCCCTCCGTTCC 58.150 55.000 19.38 0.00 31.53 3.62
2178 2995 4.462132 AGTTAAAGAGTACTCCCTCCGTTC 59.538 45.833 19.38 3.51 31.53 3.95
2179 2996 4.414677 AGTTAAAGAGTACTCCCTCCGTT 58.585 43.478 19.38 3.14 31.53 4.44
2180 2997 4.015764 GAGTTAAAGAGTACTCCCTCCGT 58.984 47.826 19.38 0.68 35.78 4.69
2181 2998 3.065095 CGAGTTAAAGAGTACTCCCTCCG 59.935 52.174 19.38 10.03 37.98 4.63
2182 2999 4.268359 TCGAGTTAAAGAGTACTCCCTCC 58.732 47.826 19.38 4.36 37.98 4.30
2183 3000 5.647225 TCTTCGAGTTAAAGAGTACTCCCTC 59.353 44.000 19.38 14.37 37.98 4.30
2184 3001 5.415389 GTCTTCGAGTTAAAGAGTACTCCCT 59.585 44.000 19.38 9.23 37.98 4.20
2185 3002 5.182760 TGTCTTCGAGTTAAAGAGTACTCCC 59.817 44.000 19.38 2.98 37.98 4.30
2186 3003 6.251655 TGTCTTCGAGTTAAAGAGTACTCC 57.748 41.667 19.38 3.64 37.98 3.85
2187 3004 7.646922 TGTTTGTCTTCGAGTTAAAGAGTACTC 59.353 37.037 15.41 15.41 37.90 2.59
2188 3005 7.486647 TGTTTGTCTTCGAGTTAAAGAGTACT 58.513 34.615 0.00 0.00 33.57 2.73
2189 3006 7.689953 TGTTTGTCTTCGAGTTAAAGAGTAC 57.310 36.000 0.00 0.00 33.57 2.73
2288 3108 4.332819 CCAAAACCAGTACAGTAGCATAGC 59.667 45.833 0.00 0.00 0.00 2.97
2332 3152 4.159879 ACAATTCTTACACTAGACCCCTCG 59.840 45.833 0.00 0.00 0.00 4.63
2473 3296 7.875971 AGAAAACATAGACTTCACAACATTCC 58.124 34.615 0.00 0.00 0.00 3.01
2607 3444 6.649155 TGCTCATGCCAGTTATTAGACTTAA 58.351 36.000 0.00 0.00 38.71 1.85
2781 3633 8.410141 CAGACAAACAACAACTAAAAATAGGGA 58.590 33.333 0.00 0.00 0.00 4.20
2783 3635 9.581099 AACAGACAAACAACAACTAAAAATAGG 57.419 29.630 0.00 0.00 0.00 2.57
2788 3640 6.584563 GCAGAACAGACAAACAACAACTAAAA 59.415 34.615 0.00 0.00 0.00 1.52
3028 3880 3.745458 AGGCTTTGTTGTTGTTGTTGTTG 59.255 39.130 0.00 0.00 0.00 3.33
3029 3881 4.001618 AGGCTTTGTTGTTGTTGTTGTT 57.998 36.364 0.00 0.00 0.00 2.83
3030 3882 3.676291 AGGCTTTGTTGTTGTTGTTGT 57.324 38.095 0.00 0.00 0.00 3.32
3032 3884 5.789521 ACTAAAGGCTTTGTTGTTGTTGTT 58.210 33.333 22.32 0.00 0.00 2.83
3034 3886 4.803613 GGACTAAAGGCTTTGTTGTTGTTG 59.196 41.667 22.32 0.00 0.00 3.33
3037 3889 3.383185 TGGGACTAAAGGCTTTGTTGTTG 59.617 43.478 22.32 7.79 0.00 3.33
3038 3890 3.637769 TGGGACTAAAGGCTTTGTTGTT 58.362 40.909 22.32 1.84 0.00 2.83
3039 3891 3.306472 TGGGACTAAAGGCTTTGTTGT 57.694 42.857 22.32 16.69 0.00 3.32
3040 3892 4.142049 TGTTTGGGACTAAAGGCTTTGTTG 60.142 41.667 22.32 13.85 0.00 3.33
3041 3893 4.027437 TGTTTGGGACTAAAGGCTTTGTT 58.973 39.130 22.32 8.73 0.00 2.83
3042 3894 3.637769 TGTTTGGGACTAAAGGCTTTGT 58.362 40.909 22.32 16.86 0.00 2.83
3043 3895 4.099419 ACTTGTTTGGGACTAAAGGCTTTG 59.901 41.667 22.32 13.97 0.00 2.77
3044 3896 4.286707 ACTTGTTTGGGACTAAAGGCTTT 58.713 39.130 17.76 17.76 0.00 3.51
3045 3897 3.910989 ACTTGTTTGGGACTAAAGGCTT 58.089 40.909 0.00 0.00 0.00 4.35
3046 3898 3.595190 ACTTGTTTGGGACTAAAGGCT 57.405 42.857 0.00 0.00 0.00 4.58
3047 3899 3.977427 CAACTTGTTTGGGACTAAAGGC 58.023 45.455 0.00 0.00 0.00 4.35
3058 3910 1.995376 AGCCTACCCCAACTTGTTTG 58.005 50.000 0.00 0.00 34.63 2.93
3059 3911 2.983898 TCTAGCCTACCCCAACTTGTTT 59.016 45.455 0.00 0.00 0.00 2.83
3060 3912 2.572104 CTCTAGCCTACCCCAACTTGTT 59.428 50.000 0.00 0.00 0.00 2.83
3061 3913 2.188817 CTCTAGCCTACCCCAACTTGT 58.811 52.381 0.00 0.00 0.00 3.16
3062 3914 1.486726 CCTCTAGCCTACCCCAACTTG 59.513 57.143 0.00 0.00 0.00 3.16
3063 3915 1.080666 ACCTCTAGCCTACCCCAACTT 59.919 52.381 0.00 0.00 0.00 2.66
3064 3916 0.717196 ACCTCTAGCCTACCCCAACT 59.283 55.000 0.00 0.00 0.00 3.16
3065 3917 0.831307 CACCTCTAGCCTACCCCAAC 59.169 60.000 0.00 0.00 0.00 3.77
3066 3918 0.714180 TCACCTCTAGCCTACCCCAA 59.286 55.000 0.00 0.00 0.00 4.12
3067 3919 0.714180 TTCACCTCTAGCCTACCCCA 59.286 55.000 0.00 0.00 0.00 4.96
3068 3920 1.485480 GTTTCACCTCTAGCCTACCCC 59.515 57.143 0.00 0.00 0.00 4.95
3069 3921 2.185387 TGTTTCACCTCTAGCCTACCC 58.815 52.381 0.00 0.00 0.00 3.69
3070 3922 3.261137 ACTTGTTTCACCTCTAGCCTACC 59.739 47.826 0.00 0.00 0.00 3.18
3071 3923 4.538746 ACTTGTTTCACCTCTAGCCTAC 57.461 45.455 0.00 0.00 0.00 3.18
3072 3924 4.347000 ACAACTTGTTTCACCTCTAGCCTA 59.653 41.667 0.00 0.00 0.00 3.93
3073 3925 3.136626 ACAACTTGTTTCACCTCTAGCCT 59.863 43.478 0.00 0.00 0.00 4.58
3074 3926 3.251004 CACAACTTGTTTCACCTCTAGCC 59.749 47.826 0.00 0.00 0.00 3.93
3075 3927 3.877508 ACACAACTTGTTTCACCTCTAGC 59.122 43.478 0.00 0.00 33.09 3.42
3076 3928 7.155328 AGATACACAACTTGTTTCACCTCTAG 58.845 38.462 0.00 0.00 38.33 2.43
3077 3929 7.015292 AGAGATACACAACTTGTTTCACCTCTA 59.985 37.037 0.00 0.00 38.33 2.43
3078 3930 5.930135 AGATACACAACTTGTTTCACCTCT 58.070 37.500 0.00 0.00 38.33 3.69
3079 3931 5.992217 AGAGATACACAACTTGTTTCACCTC 59.008 40.000 0.00 0.00 38.33 3.85
3080 3932 5.930135 AGAGATACACAACTTGTTTCACCT 58.070 37.500 0.00 0.00 38.33 4.00
3081 3933 6.619801 AAGAGATACACAACTTGTTTCACC 57.380 37.500 0.00 0.00 38.33 4.02
3082 3934 9.997482 TTTAAAGAGATACACAACTTGTTTCAC 57.003 29.630 0.00 0.00 38.33 3.18
3149 4001 7.674471 AAACTCTAAATCCTCAAGTGCTAAC 57.326 36.000 0.00 0.00 0.00 2.34
3204 4056 4.587262 TGTCCTAGTCTCACAAAAGCTACA 59.413 41.667 0.00 0.00 0.00 2.74
3314 4166 2.530151 AGGAGCCTGACCAAGCCA 60.530 61.111 0.00 0.00 0.00 4.75
3317 4170 3.634397 TTTATGAGGAGCCTGACCAAG 57.366 47.619 0.00 0.00 0.00 3.61
3385 4239 6.472163 GCCTTTGACGTGATTGGTTATATTTG 59.528 38.462 0.00 0.00 0.00 2.32
3475 4329 2.669670 CGCAGCTCTAATATGGTCCTCG 60.670 54.545 0.00 0.00 0.00 4.63
4258 5148 4.211374 CGACTTACAAAAGTGAACAGAGGG 59.789 45.833 0.00 0.00 46.09 4.30
4259 5149 4.809426 ACGACTTACAAAAGTGAACAGAGG 59.191 41.667 0.00 0.00 46.09 3.69
4260 5150 5.968387 ACGACTTACAAAAGTGAACAGAG 57.032 39.130 0.00 0.00 46.09 3.35
4261 5151 6.730960 AAACGACTTACAAAAGTGAACAGA 57.269 33.333 0.00 0.00 46.09 3.41
4262 5152 8.385111 TCTTAAACGACTTACAAAAGTGAACAG 58.615 33.333 0.00 0.00 46.09 3.16
4263 5153 8.170553 GTCTTAAACGACTTACAAAAGTGAACA 58.829 33.333 0.00 0.00 46.09 3.18
4264 5154 8.170553 TGTCTTAAACGACTTACAAAAGTGAAC 58.829 33.333 0.00 0.00 46.09 3.18
4265 5155 8.254178 TGTCTTAAACGACTTACAAAAGTGAA 57.746 30.769 0.00 0.00 46.09 3.18
4266 5156 7.464977 GCTGTCTTAAACGACTTACAAAAGTGA 60.465 37.037 0.00 0.00 46.09 3.41
4267 5157 6.627671 GCTGTCTTAAACGACTTACAAAAGTG 59.372 38.462 0.00 0.00 46.09 3.16
4269 5159 6.846283 CAGCTGTCTTAAACGACTTACAAAAG 59.154 38.462 5.25 0.00 38.77 2.27
4270 5160 6.535865 TCAGCTGTCTTAAACGACTTACAAAA 59.464 34.615 14.67 0.00 35.00 2.44
4271 5161 6.044046 TCAGCTGTCTTAAACGACTTACAAA 58.956 36.000 14.67 0.00 35.00 2.83
4272 5162 5.593968 TCAGCTGTCTTAAACGACTTACAA 58.406 37.500 14.67 0.00 35.00 2.41
4273 5163 5.190992 TCAGCTGTCTTAAACGACTTACA 57.809 39.130 14.67 0.00 35.00 2.41
4274 5164 6.520792 TTTCAGCTGTCTTAAACGACTTAC 57.479 37.500 14.67 0.00 35.00 2.34
4275 5165 7.439955 TCAATTTCAGCTGTCTTAAACGACTTA 59.560 33.333 14.67 0.00 35.00 2.24
4276 5166 6.260050 TCAATTTCAGCTGTCTTAAACGACTT 59.740 34.615 14.67 0.00 35.00 3.01
4277 5167 5.758296 TCAATTTCAGCTGTCTTAAACGACT 59.242 36.000 14.67 0.00 35.00 4.18
4278 5168 5.985781 TCAATTTCAGCTGTCTTAAACGAC 58.014 37.500 14.67 0.00 34.52 4.34
4279 5169 6.260050 AGTTCAATTTCAGCTGTCTTAAACGA 59.740 34.615 14.67 4.79 0.00 3.85
4280 5170 6.358030 CAGTTCAATTTCAGCTGTCTTAAACG 59.642 38.462 14.67 2.54 0.00 3.60
4281 5171 7.196331 ACAGTTCAATTTCAGCTGTCTTAAAC 58.804 34.615 14.67 11.99 35.78 2.01
4282 5172 7.333528 ACAGTTCAATTTCAGCTGTCTTAAA 57.666 32.000 14.67 7.20 35.78 1.52
4283 5173 6.942532 ACAGTTCAATTTCAGCTGTCTTAA 57.057 33.333 14.67 4.81 35.78 1.85
4284 5174 6.942532 AACAGTTCAATTTCAGCTGTCTTA 57.057 33.333 14.67 0.00 39.19 2.10
4285 5175 5.841957 AACAGTTCAATTTCAGCTGTCTT 57.158 34.783 14.67 3.02 39.19 3.01
4286 5176 5.841957 AAACAGTTCAATTTCAGCTGTCT 57.158 34.783 14.67 0.00 39.19 3.41
4287 5177 6.638468 CCTAAAACAGTTCAATTTCAGCTGTC 59.362 38.462 14.67 0.00 39.19 3.51
4288 5178 6.096846 ACCTAAAACAGTTCAATTTCAGCTGT 59.903 34.615 14.67 0.00 41.51 4.40
4289 5179 6.418819 CACCTAAAACAGTTCAATTTCAGCTG 59.581 38.462 7.63 7.63 0.00 4.24
4290 5180 6.507023 CACCTAAAACAGTTCAATTTCAGCT 58.493 36.000 0.00 0.00 0.00 4.24
4291 5181 5.175673 GCACCTAAAACAGTTCAATTTCAGC 59.824 40.000 0.00 0.00 0.00 4.26
4292 5182 6.418819 CAGCACCTAAAACAGTTCAATTTCAG 59.581 38.462 0.00 0.00 0.00 3.02
4293 5183 6.127479 ACAGCACCTAAAACAGTTCAATTTCA 60.127 34.615 0.00 0.00 0.00 2.69
4294 5184 6.273071 ACAGCACCTAAAACAGTTCAATTTC 58.727 36.000 0.00 0.00 0.00 2.17
4295 5185 6.096846 AGACAGCACCTAAAACAGTTCAATTT 59.903 34.615 0.00 0.00 0.00 1.82
4296 5186 5.594317 AGACAGCACCTAAAACAGTTCAATT 59.406 36.000 0.00 0.00 0.00 2.32
4297 5187 5.133221 AGACAGCACCTAAAACAGTTCAAT 58.867 37.500 0.00 0.00 0.00 2.57
4298 5188 4.523083 AGACAGCACCTAAAACAGTTCAA 58.477 39.130 0.00 0.00 0.00 2.69
4299 5189 4.150897 AGACAGCACCTAAAACAGTTCA 57.849 40.909 0.00 0.00 0.00 3.18
4300 5190 6.613755 TTAAGACAGCACCTAAAACAGTTC 57.386 37.500 0.00 0.00 0.00 3.01
4301 5191 7.068226 ACATTTAAGACAGCACCTAAAACAGTT 59.932 33.333 0.00 0.00 0.00 3.16
4302 5192 6.546034 ACATTTAAGACAGCACCTAAAACAGT 59.454 34.615 0.00 0.00 0.00 3.55
4303 5193 6.970484 ACATTTAAGACAGCACCTAAAACAG 58.030 36.000 0.00 0.00 0.00 3.16
4304 5194 6.770785 AGACATTTAAGACAGCACCTAAAACA 59.229 34.615 0.00 0.00 0.00 2.83
4305 5195 7.203255 AGACATTTAAGACAGCACCTAAAAC 57.797 36.000 0.00 0.00 0.00 2.43
4306 5196 8.911918 TTAGACATTTAAGACAGCACCTAAAA 57.088 30.769 0.00 0.00 0.00 1.52
4307 5197 8.911918 TTTAGACATTTAAGACAGCACCTAAA 57.088 30.769 0.00 0.00 0.00 1.85
4308 5198 8.911918 TTTTAGACATTTAAGACAGCACCTAA 57.088 30.769 0.00 0.00 0.00 2.69
4309 5199 7.606456 CCTTTTAGACATTTAAGACAGCACCTA 59.394 37.037 0.00 0.00 0.00 3.08
4310 5200 6.431234 CCTTTTAGACATTTAAGACAGCACCT 59.569 38.462 0.00 0.00 0.00 4.00
4311 5201 6.206829 ACCTTTTAGACATTTAAGACAGCACC 59.793 38.462 0.00 0.00 0.00 5.01
4312 5202 7.173390 AGACCTTTTAGACATTTAAGACAGCAC 59.827 37.037 0.00 0.00 0.00 4.40
4313 5203 7.224297 AGACCTTTTAGACATTTAAGACAGCA 58.776 34.615 0.00 0.00 0.00 4.41
4314 5204 7.674471 AGACCTTTTAGACATTTAAGACAGC 57.326 36.000 0.00 0.00 0.00 4.40
4322 5212 9.965824 CACATTTGTAAGACCTTTTAGACATTT 57.034 29.630 0.00 0.00 0.00 2.32
4323 5213 9.349713 TCACATTTGTAAGACCTTTTAGACATT 57.650 29.630 0.00 0.00 0.00 2.71
4324 5214 8.918202 TCACATTTGTAAGACCTTTTAGACAT 57.082 30.769 0.00 0.00 0.00 3.06
4325 5215 8.617809 GTTCACATTTGTAAGACCTTTTAGACA 58.382 33.333 0.00 0.00 0.00 3.41
4326 5216 8.617809 TGTTCACATTTGTAAGACCTTTTAGAC 58.382 33.333 0.00 0.00 0.00 2.59
4327 5217 8.740123 TGTTCACATTTGTAAGACCTTTTAGA 57.260 30.769 0.00 0.00 0.00 2.10
4328 5218 8.836413 TCTGTTCACATTTGTAAGACCTTTTAG 58.164 33.333 0.00 0.00 0.00 1.85
4329 5219 8.740123 TCTGTTCACATTTGTAAGACCTTTTA 57.260 30.769 0.00 0.00 0.00 1.52
4330 5220 7.201821 CCTCTGTTCACATTTGTAAGACCTTTT 60.202 37.037 0.00 0.00 0.00 2.27
4331 5221 6.263168 CCTCTGTTCACATTTGTAAGACCTTT 59.737 38.462 0.00 0.00 0.00 3.11
4332 5222 5.765182 CCTCTGTTCACATTTGTAAGACCTT 59.235 40.000 0.00 0.00 0.00 3.50
4333 5223 5.308825 CCTCTGTTCACATTTGTAAGACCT 58.691 41.667 0.00 0.00 0.00 3.85
4334 5224 4.455877 CCCTCTGTTCACATTTGTAAGACC 59.544 45.833 0.00 0.00 0.00 3.85
4335 5225 5.305585 TCCCTCTGTTCACATTTGTAAGAC 58.694 41.667 0.00 0.00 0.00 3.01
4336 5226 5.071788 ACTCCCTCTGTTCACATTTGTAAGA 59.928 40.000 0.00 0.00 0.00 2.10
4337 5227 5.308825 ACTCCCTCTGTTCACATTTGTAAG 58.691 41.667 0.00 0.00 0.00 2.34
4338 5228 5.304686 ACTCCCTCTGTTCACATTTGTAA 57.695 39.130 0.00 0.00 0.00 2.41
4339 5229 4.974645 ACTCCCTCTGTTCACATTTGTA 57.025 40.909 0.00 0.00 0.00 2.41
4340 5230 3.864789 ACTCCCTCTGTTCACATTTGT 57.135 42.857 0.00 0.00 0.00 2.83
4341 5231 7.921786 TTAATACTCCCTCTGTTCACATTTG 57.078 36.000 0.00 0.00 0.00 2.32
4345 5235 8.429641 GGAATATTAATACTCCCTCTGTTCACA 58.570 37.037 11.23 0.00 0.00 3.58
4346 5236 8.429641 TGGAATATTAATACTCCCTCTGTTCAC 58.570 37.037 18.01 2.55 27.82 3.18
4347 5237 8.561536 TGGAATATTAATACTCCCTCTGTTCA 57.438 34.615 18.01 0.00 27.82 3.18
4348 5238 9.495572 CTTGGAATATTAATACTCCCTCTGTTC 57.504 37.037 18.01 5.98 27.82 3.18
4349 5239 9.004231 ACTTGGAATATTAATACTCCCTCTGTT 57.996 33.333 18.01 0.00 27.82 3.16
4350 5240 8.568617 ACTTGGAATATTAATACTCCCTCTGT 57.431 34.615 18.01 9.78 27.82 3.41
4352 5242 9.327731 CCTACTTGGAATATTAATACTCCCTCT 57.672 37.037 18.01 5.01 38.35 3.69
4353 5243 9.322769 TCCTACTTGGAATATTAATACTCCCTC 57.677 37.037 18.01 2.35 42.94 4.30
4599 5490 7.571428 GCCAGAAGTCAACTAACAGAACAATAC 60.571 40.741 0.00 0.00 0.00 1.89
4604 5495 4.212214 CAGCCAGAAGTCAACTAACAGAAC 59.788 45.833 0.00 0.00 0.00 3.01
4759 5663 0.378257 GGCATGCATACGGTGTTCAG 59.622 55.000 21.36 0.00 0.00 3.02
4809 5713 4.836825 AGTCATGAACCACAGGTAAGATG 58.163 43.478 0.00 0.00 33.12 2.90
4829 5733 3.006940 TGCACGTCTTTCAAAGTGAAGT 58.993 40.909 0.00 0.00 37.70 3.01
4848 5752 5.404946 TGTTCGGTAGAAGTAACTACATGC 58.595 41.667 0.00 0.00 42.91 4.06
4872 5776 7.743749 AGGTAATATCTGAACAGAGCATCAAT 58.256 34.615 10.26 0.00 41.33 2.57
4970 5874 3.178539 GCCTAGTTTGTGGCTCGC 58.821 61.111 0.00 0.00 45.26 5.03
4989 5893 0.468226 AGTGTTGTCTCTTCCCGCAA 59.532 50.000 0.00 0.00 0.00 4.85
4992 5896 0.868406 GCAAGTGTTGTCTCTTCCCG 59.132 55.000 0.00 0.00 0.00 5.14
5144 6050 5.162075 AGTGTCGCTGATTTAGTACAACTC 58.838 41.667 0.00 0.00 0.00 3.01
5169 6075 3.211045 TGTACTCCCTCTGTTGCAAAAC 58.789 45.455 0.00 0.00 0.00 2.43
5176 6082 4.702131 GCAATGAATTGTACTCCCTCTGTT 59.298 41.667 5.02 0.00 39.88 3.16
5179 6085 4.574674 TGCAATGAATTGTACTCCCTCT 57.425 40.909 5.02 0.00 39.88 3.69
5233 6142 4.410228 ACATTAGAGGTGCACATACCAGAT 59.590 41.667 20.43 0.47 43.37 2.90
5319 6228 0.397941 TGGCTCCTAGGTGCATATGC 59.602 55.000 31.19 21.09 42.50 3.14
5320 6229 2.936919 TTGGCTCCTAGGTGCATATG 57.063 50.000 31.19 0.00 36.47 1.78
5322 6231 2.307392 TGTTTTGGCTCCTAGGTGCATA 59.693 45.455 31.19 19.50 36.47 3.14
5323 6232 1.075374 TGTTTTGGCTCCTAGGTGCAT 59.925 47.619 31.19 0.00 36.47 3.96
5324 6233 0.476338 TGTTTTGGCTCCTAGGTGCA 59.524 50.000 31.19 17.76 36.47 4.57
5325 6234 0.881796 GTGTTTTGGCTCCTAGGTGC 59.118 55.000 24.68 24.68 0.00 5.01
5326 6235 1.534729 GGTGTTTTGGCTCCTAGGTG 58.465 55.000 9.08 7.68 0.00 4.00
5331 6240 2.978010 CGCGGTGTTTTGGCTCCT 60.978 61.111 0.00 0.00 0.00 3.69
5332 6241 3.249973 GACGCGGTGTTTTGGCTCC 62.250 63.158 12.47 0.00 0.00 4.70
5333 6242 2.251371 GACGCGGTGTTTTGGCTC 59.749 61.111 12.47 0.00 0.00 4.70
5334 6243 2.386064 TAGGACGCGGTGTTTTGGCT 62.386 55.000 12.47 0.00 0.00 4.75
5335 6244 1.962306 TAGGACGCGGTGTTTTGGC 60.962 57.895 12.47 0.00 0.00 4.52
5336 6245 0.601841 AGTAGGACGCGGTGTTTTGG 60.602 55.000 12.47 0.00 0.00 3.28
5337 6246 1.223187 AAGTAGGACGCGGTGTTTTG 58.777 50.000 12.47 0.00 0.00 2.44
5338 6247 1.869132 GAAAGTAGGACGCGGTGTTTT 59.131 47.619 12.47 3.08 0.00 2.43
5339 6248 1.069668 AGAAAGTAGGACGCGGTGTTT 59.930 47.619 12.47 0.65 0.00 2.83
5342 6251 1.741706 TCTAGAAAGTAGGACGCGGTG 59.258 52.381 12.47 0.00 0.00 4.94
5344 6253 2.422832 ACTTCTAGAAAGTAGGACGCGG 59.577 50.000 12.47 0.00 0.00 6.46
5345 6254 3.761311 ACTTCTAGAAAGTAGGACGCG 57.239 47.619 3.53 3.53 0.00 6.01
5346 6255 5.467705 TCAAACTTCTAGAAAGTAGGACGC 58.532 41.667 6.63 0.00 0.00 5.19
5347 6256 7.368833 TCTTCAAACTTCTAGAAAGTAGGACG 58.631 38.462 6.63 6.42 0.00 4.79
5348 6257 9.713713 ATTCTTCAAACTTCTAGAAAGTAGGAC 57.286 33.333 6.63 0.00 31.11 3.85
5361 6270 8.462016 ACCATGCTTACATATTCTTCAAACTTC 58.538 33.333 0.00 0.00 33.67 3.01
5400 6356 1.522668 TGATCTGCAAAACTCCCACG 58.477 50.000 0.00 0.00 0.00 4.94
5649 6606 9.912634 TGAAAATCTTAAGAATTTTGCTTCGAT 57.087 25.926 17.47 0.00 28.18 3.59
5650 6607 9.912634 ATGAAAATCTTAAGAATTTTGCTTCGA 57.087 25.926 17.47 0.00 28.18 3.71
5662 6619 8.623903 CCGAATCCATTGATGAAAATCTTAAGA 58.376 33.333 7.82 7.82 0.00 2.10
5663 6620 8.623903 TCCGAATCCATTGATGAAAATCTTAAG 58.376 33.333 0.00 0.00 0.00 1.85
5664 6621 8.518430 TCCGAATCCATTGATGAAAATCTTAA 57.482 30.769 0.00 0.00 0.00 1.85
5665 6622 8.518430 TTCCGAATCCATTGATGAAAATCTTA 57.482 30.769 0.00 0.00 0.00 2.10
5666 6623 7.408756 TTCCGAATCCATTGATGAAAATCTT 57.591 32.000 0.00 0.00 0.00 2.40
5667 6624 7.408756 TTTCCGAATCCATTGATGAAAATCT 57.591 32.000 0.00 0.00 0.00 2.40
5668 6625 7.254218 GCTTTTCCGAATCCATTGATGAAAATC 60.254 37.037 0.00 0.00 33.51 2.17
5669 6626 6.536224 GCTTTTCCGAATCCATTGATGAAAAT 59.464 34.615 0.00 0.00 33.51 1.82
5670 6627 5.868801 GCTTTTCCGAATCCATTGATGAAAA 59.131 36.000 0.00 0.00 33.20 2.29
5671 6628 5.047448 TGCTTTTCCGAATCCATTGATGAAA 60.047 36.000 0.00 0.00 0.00 2.69
5672 6629 4.462132 TGCTTTTCCGAATCCATTGATGAA 59.538 37.500 0.00 0.00 0.00 2.57
5673 6630 4.015764 TGCTTTTCCGAATCCATTGATGA 58.984 39.130 0.00 0.00 0.00 2.92
5674 6631 4.357142 CTGCTTTTCCGAATCCATTGATG 58.643 43.478 0.00 0.00 0.00 3.07
5675 6632 3.382546 CCTGCTTTTCCGAATCCATTGAT 59.617 43.478 0.00 0.00 0.00 2.57
5676 6633 2.754552 CCTGCTTTTCCGAATCCATTGA 59.245 45.455 0.00 0.00 0.00 2.57
5677 6634 2.159198 CCCTGCTTTTCCGAATCCATTG 60.159 50.000 0.00 0.00 0.00 2.82
5678 6635 2.102578 CCCTGCTTTTCCGAATCCATT 58.897 47.619 0.00 0.00 0.00 3.16
5679 6636 1.767759 CCCTGCTTTTCCGAATCCAT 58.232 50.000 0.00 0.00 0.00 3.41
5680 6637 0.965363 GCCCTGCTTTTCCGAATCCA 60.965 55.000 0.00 0.00 0.00 3.41
5681 6638 0.681243 AGCCCTGCTTTTCCGAATCC 60.681 55.000 0.00 0.00 33.89 3.01
5682 6639 2.873797 AGCCCTGCTTTTCCGAATC 58.126 52.632 0.00 0.00 33.89 2.52
5709 6848 0.923358 AAGTTGGTGGAAGTGGTGGA 59.077 50.000 0.00 0.00 0.00 4.02
5710 6849 1.032014 CAAGTTGGTGGAAGTGGTGG 58.968 55.000 0.00 0.00 0.00 4.61
5711 6850 1.762708 ACAAGTTGGTGGAAGTGGTG 58.237 50.000 7.96 0.00 0.00 4.17
5712 6851 3.486383 CATACAAGTTGGTGGAAGTGGT 58.514 45.455 7.96 0.00 0.00 4.16
5713 6852 2.819608 CCATACAAGTTGGTGGAAGTGG 59.180 50.000 19.42 7.90 31.50 4.00
5714 6853 3.486383 ACCATACAAGTTGGTGGAAGTG 58.514 45.455 26.85 8.55 45.71 3.16
5715 6854 3.876309 ACCATACAAGTTGGTGGAAGT 57.124 42.857 26.85 9.76 45.71 3.01
5716 6855 6.038271 GCTAATACCATACAAGTTGGTGGAAG 59.962 42.308 26.85 19.57 46.81 3.46
5717 6856 5.883673 GCTAATACCATACAAGTTGGTGGAA 59.116 40.000 26.85 13.39 46.81 3.53
5718 6857 5.190925 AGCTAATACCATACAAGTTGGTGGA 59.809 40.000 26.85 15.51 46.81 4.02
5731 6870 3.555966 GGCCAAGACAAGCTAATACCAT 58.444 45.455 0.00 0.00 0.00 3.55
5749 6888 1.439353 ATCGCATGATTCACACGGCC 61.439 55.000 0.00 0.00 0.00 6.13
5751 6890 1.009078 ACATCGCATGATTCACACGG 58.991 50.000 0.00 0.00 30.49 4.94
5766 6905 4.553330 TCCAAAGAGTCCCTAACACATC 57.447 45.455 0.00 0.00 0.00 3.06
5839 6978 3.386768 ACGAAGCAAGCTCTGTAGAAA 57.613 42.857 0.00 0.00 0.00 2.52
5845 6984 0.308684 TGCAAACGAAGCAAGCTCTG 59.691 50.000 0.00 0.00 39.39 3.35
5857 6996 3.651803 TGGGTTTTAATCCTGCAAACG 57.348 42.857 0.00 0.00 32.18 3.60
5861 7000 7.732222 AAATTCTATGGGTTTTAATCCTGCA 57.268 32.000 0.00 0.00 0.00 4.41
5862 7001 8.478066 AGAAAATTCTATGGGTTTTAATCCTGC 58.522 33.333 0.00 0.00 35.34 4.85
5872 7011 9.320295 TGGAACATAAAGAAAATTCTATGGGTT 57.680 29.630 9.55 6.80 36.28 4.11
5873 7012 8.749354 GTGGAACATAAAGAAAATTCTATGGGT 58.251 33.333 9.55 0.11 44.52 4.51
5874 7013 8.971073 AGTGGAACATAAAGAAAATTCTATGGG 58.029 33.333 9.55 0.00 44.52 4.00
5881 7020 6.295067 CGGGGAAGTGGAACATAAAGAAAATT 60.295 38.462 0.00 0.00 44.52 1.82
5882 7021 5.185056 CGGGGAAGTGGAACATAAAGAAAAT 59.815 40.000 0.00 0.00 44.52 1.82
5897 7036 0.179001 AAACCAAGACCGGGGAAGTG 60.179 55.000 6.32 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.