Multiple sequence alignment - TraesCS7D01G224900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G224900 chr7D 100.000 4468 0 0 1 4468 185132113 185127646 0.000000e+00 8251.0
1 TraesCS7D01G224900 chr7B 92.247 1522 94 11 1 1516 327269016 327267513 0.000000e+00 2135.0
2 TraesCS7D01G224900 chr7B 88.686 1043 79 17 1810 2825 327267204 327266174 0.000000e+00 1236.0
3 TraesCS7D01G224900 chr7B 87.297 1047 89 23 2986 4014 327265067 327264047 0.000000e+00 1157.0
4 TraesCS7D01G224900 chr7B 91.720 157 13 0 2821 2977 327265481 327265325 7.520000e-53 219.0
5 TraesCS7D01G224900 chr7A 91.351 1584 92 20 3 1552 192663937 192662365 0.000000e+00 2124.0
6 TraesCS7D01G224900 chr7A 92.830 781 25 12 2149 2913 192660921 192660156 0.000000e+00 1103.0
7 TraesCS7D01G224900 chr7A 87.980 807 65 18 3218 4014 192660159 192659375 0.000000e+00 924.0
8 TraesCS7D01G224900 chr6A 85.181 803 91 20 7 805 106799083 106798305 0.000000e+00 798.0
9 TraesCS7D01G224900 chr6B 84.777 808 99 18 3 805 169108975 169108187 0.000000e+00 789.0
10 TraesCS7D01G224900 chr6D 84.080 804 91 26 7 805 88775706 88774935 0.000000e+00 741.0
11 TraesCS7D01G224900 chr6D 80.677 709 85 31 3 702 5761950 5762615 1.860000e-138 503.0
12 TraesCS7D01G224900 chr5D 96.907 194 6 0 4214 4407 421982585 421982392 4.310000e-85 326.0
13 TraesCS7D01G224900 chr2D 96.410 195 7 0 4213 4407 284560176 284559982 5.580000e-84 322.0
14 TraesCS7D01G224900 chr2D 95.833 192 8 0 4216 4407 643768208 643768017 1.210000e-80 311.0
15 TraesCS7D01G224900 chr1D 95.455 198 9 0 4210 4407 80311418 80311221 2.590000e-82 316.0
16 TraesCS7D01G224900 chr1D 95.876 194 7 1 4214 4407 229032541 229032733 3.360000e-81 313.0
17 TraesCS7D01G224900 chr4B 93.427 213 12 2 4196 4407 636464259 636464470 9.330000e-82 315.0
18 TraesCS7D01G224900 chr3D 95.385 195 9 0 4213 4407 108291062 108290868 1.210000e-80 311.0
19 TraesCS7D01G224900 chr3B 95.385 195 9 0 4213 4407 813188517 813188323 1.210000e-80 311.0
20 TraesCS7D01G224900 chr3B 97.436 39 1 0 4061 4099 798115899 798115861 2.880000e-07 67.6
21 TraesCS7D01G224900 chr2A 95.385 195 7 2 4213 4407 333742190 333742382 4.340000e-80 309.0
22 TraesCS7D01G224900 chr2B 80.714 140 26 1 563 702 755624753 755624891 1.700000e-19 108.0
23 TraesCS7D01G224900 chr2B 97.297 37 1 0 4132 4168 758559112 758559148 3.730000e-06 63.9
24 TraesCS7D01G224900 chr1A 96.970 33 1 0 4136 4168 390692363 390692331 6.240000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G224900 chr7D 185127646 185132113 4467 True 8251.000000 8251 100.000000 1 4468 1 chr7D.!!$R1 4467
1 TraesCS7D01G224900 chr7B 327264047 327269016 4969 True 1186.750000 2135 89.987500 1 4014 4 chr7B.!!$R1 4013
2 TraesCS7D01G224900 chr7A 192659375 192663937 4562 True 1383.666667 2124 90.720333 3 4014 3 chr7A.!!$R1 4011
3 TraesCS7D01G224900 chr6A 106798305 106799083 778 True 798.000000 798 85.181000 7 805 1 chr6A.!!$R1 798
4 TraesCS7D01G224900 chr6B 169108187 169108975 788 True 789.000000 789 84.777000 3 805 1 chr6B.!!$R1 802
5 TraesCS7D01G224900 chr6D 88774935 88775706 771 True 741.000000 741 84.080000 7 805 1 chr6D.!!$R1 798
6 TraesCS7D01G224900 chr6D 5761950 5762615 665 False 503.000000 503 80.677000 3 702 1 chr6D.!!$F1 699

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
971 998 0.038744 AGAGGAAACCACCATGGCTG 59.961 55.000 13.04 9.45 42.67 4.85 F
995 1022 1.002468 CGCCCAGACTGAACACAAAAG 60.002 52.381 3.32 0.00 0.00 2.27 F
1992 2444 0.034896 AACTACCAAGGCCAGTGACG 59.965 55.000 5.01 0.00 0.00 4.35 F
2877 4748 0.179023 TGACAGCAGGCACAATGACA 60.179 50.000 0.00 0.00 0.00 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1977 2429 0.106918 TTTTCGTCACTGGCCTTGGT 60.107 50.0 3.32 0.0 0.0 3.67 R
2137 3138 0.386113 CTACTAAGGAGAGCGGGCAC 59.614 60.0 0.00 0.0 0.0 5.01 R
3111 5231 0.036671 CGTTCACCTTCACCCTACCC 60.037 60.0 0.00 0.0 0.0 3.69 R
4390 6529 0.109153 TCCTCCTGCGCGTATACCTA 59.891 55.0 8.43 0.0 0.0 3.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
105 107 0.041047 CACATGTCACTGGCACAACG 60.041 55.000 0.00 0.00 38.70 4.10
236 245 8.026607 GCAATGCCATCAACTAAACTAAAGTAA 58.973 33.333 0.00 0.00 0.00 2.24
237 246 9.906660 CAATGCCATCAACTAAACTAAAGTAAA 57.093 29.630 0.00 0.00 0.00 2.01
289 299 4.927049 ACCATTTGATCAGACTCACCATT 58.073 39.130 0.00 0.00 0.00 3.16
414 432 5.416639 AGCTTCATGCATCAACAGTCAAATA 59.583 36.000 0.00 0.00 45.94 1.40
459 477 3.190744 AGAAACAGATCAGCATTGCACAG 59.809 43.478 11.91 0.37 0.00 3.66
468 486 1.855213 GCATTGCACAGCGGAGTGAA 61.855 55.000 3.15 0.00 42.05 3.18
475 493 1.048601 ACAGCGGAGTGAAAGAAGGA 58.951 50.000 0.00 0.00 0.00 3.36
606 624 2.100603 GCGTCTTCCTCGTCCTCG 59.899 66.667 0.00 0.00 38.55 4.63
609 627 1.424635 GTCTTCCTCGTCCTCGTCG 59.575 63.158 0.00 0.00 38.33 5.12
704 722 0.323629 GTGACGGTGGATTGGAAGGA 59.676 55.000 0.00 0.00 0.00 3.36
911 938 3.100862 GAGGCTGCGATTCGGTTGC 62.101 63.158 8.34 0.00 37.76 4.17
947 974 2.879907 CCGGTTAAGTCTCGCGGA 59.120 61.111 6.13 0.00 0.00 5.54
965 992 2.500098 CGGAGATAAGAGGAAACCACCA 59.500 50.000 0.00 0.00 0.00 4.17
971 998 0.038744 AGAGGAAACCACCATGGCTG 59.961 55.000 13.04 9.45 42.67 4.85
995 1022 1.002468 CGCCCAGACTGAACACAAAAG 60.002 52.381 3.32 0.00 0.00 2.27
996 1023 2.024414 GCCCAGACTGAACACAAAAGT 58.976 47.619 3.32 0.00 0.00 2.66
1299 1338 1.192428 GGAAGACCTACACCACCGAT 58.808 55.000 0.00 0.00 0.00 4.18
1444 1491 1.818674 TGCGTTCTCATCAGCTCACTA 59.181 47.619 0.00 0.00 0.00 2.74
1448 1495 3.430931 GTTCTCATCAGCTCACTACGTC 58.569 50.000 0.00 0.00 0.00 4.34
1451 1498 2.608090 CTCATCAGCTCACTACGTCGTA 59.392 50.000 4.78 4.78 0.00 3.43
1461 1508 3.916172 TCACTACGTCGTAGCATTTGTTC 59.084 43.478 28.07 0.00 39.51 3.18
1468 1515 3.746492 GTCGTAGCATTTGTTCCTTCAGT 59.254 43.478 0.00 0.00 0.00 3.41
1472 1519 7.438459 GTCGTAGCATTTGTTCCTTCAGTATAT 59.562 37.037 0.00 0.00 0.00 0.86
1554 1771 7.562135 ACTCGCTAAAGATAATTTCACCCTAA 58.438 34.615 0.00 0.00 0.00 2.69
1556 1773 8.974060 TCGCTAAAGATAATTTCACCCTAAAT 57.026 30.769 0.00 0.00 0.00 1.40
1598 1815 7.390718 CAGTAGTTACTAGCAACTTCCCATTTT 59.609 37.037 13.53 0.00 39.45 1.82
1600 1817 9.392259 GTAGTTACTAGCAACTTCCCATTTTAT 57.608 33.333 13.53 0.00 39.45 1.40
1658 1875 7.971455 AGTAGATAAATGTAAGACGTTTTGGC 58.029 34.615 0.83 0.00 38.23 4.52
1659 1876 5.864986 AGATAAATGTAAGACGTTTTGGCG 58.135 37.500 0.83 0.00 38.23 5.69
1660 1877 2.981400 AATGTAAGACGTTTTGGCGG 57.019 45.000 0.83 0.00 35.98 6.13
1661 1878 2.172851 ATGTAAGACGTTTTGGCGGA 57.827 45.000 0.83 0.00 35.98 5.54
1662 1879 2.172851 TGTAAGACGTTTTGGCGGAT 57.827 45.000 0.83 0.00 35.98 4.18
1663 1880 2.496111 TGTAAGACGTTTTGGCGGATT 58.504 42.857 0.83 0.00 35.98 3.01
1666 1883 4.696402 TGTAAGACGTTTTGGCGGATTAAT 59.304 37.500 0.83 0.00 35.98 1.40
1667 1884 4.351131 AAGACGTTTTGGCGGATTAATC 57.649 40.909 6.93 6.93 35.98 1.75
1668 1885 2.681344 AGACGTTTTGGCGGATTAATCC 59.319 45.455 22.63 22.63 43.65 3.01
1682 2111 4.394920 GGATTAATCCGAACTGCTTGAACA 59.605 41.667 18.61 0.00 37.19 3.18
1683 2112 5.447818 GGATTAATCCGAACTGCTTGAACAG 60.448 44.000 18.61 0.00 39.28 3.16
1698 2127 7.554243 GCTTGAACAGCTTACATTTAAAGAC 57.446 36.000 0.00 0.00 46.27 3.01
1722 2174 2.836372 AGGTAGTACTTACAAGGGCCAC 59.164 50.000 6.18 0.00 33.73 5.01
1728 2180 2.957474 ACTTACAAGGGCCACAAATGT 58.043 42.857 6.18 5.25 0.00 2.71
1740 2192 3.287312 CACAAATGTGGCCAACTAGTG 57.713 47.619 7.24 9.67 42.10 2.74
1741 2193 2.030007 CACAAATGTGGCCAACTAGTGG 60.030 50.000 7.24 1.28 42.96 4.00
1742 2194 4.309492 CACAAATGTGGCCAACTAGTGGA 61.309 47.826 7.24 0.00 45.26 4.02
1743 2195 5.588696 CACAAATGTGGCCAACTAGTGGAT 61.589 45.833 7.24 0.00 45.26 3.41
1744 2196 6.323003 CACAAATGTGGCCAACTAGTGGATA 61.323 44.000 7.24 1.39 45.26 2.59
1745 2197 7.744641 CACAAATGTGGCCAACTAGTGGATAA 61.745 42.308 7.24 0.00 45.26 1.75
1746 2198 9.644119 CACAAATGTGGCCAACTAGTGGATAAC 62.644 44.444 7.24 8.91 45.26 1.89
1773 2225 8.514136 TCAAAAAGTAAATAAAATGTGAGGCG 57.486 30.769 0.00 0.00 0.00 5.52
1788 2240 3.128589 GTGAGGCGGAAAATGCAAAGATA 59.871 43.478 0.00 0.00 0.00 1.98
1789 2241 3.953612 TGAGGCGGAAAATGCAAAGATAT 59.046 39.130 0.00 0.00 0.00 1.63
1790 2242 4.402155 TGAGGCGGAAAATGCAAAGATATT 59.598 37.500 0.00 0.00 0.00 1.28
1791 2243 5.105392 TGAGGCGGAAAATGCAAAGATATTT 60.105 36.000 0.00 0.00 0.00 1.40
1792 2244 5.733676 AGGCGGAAAATGCAAAGATATTTT 58.266 33.333 0.00 0.00 38.72 1.82
1793 2245 5.581874 AGGCGGAAAATGCAAAGATATTTTG 59.418 36.000 0.00 6.19 36.81 2.44
1866 2318 2.352127 GCAACAAGCTGGGAATTCTCAC 60.352 50.000 3.16 1.87 41.15 3.51
1884 2336 1.801771 CACATTTTCGGTTGCTCGGTA 59.198 47.619 0.00 0.00 0.00 4.02
1885 2337 1.802365 ACATTTTCGGTTGCTCGGTAC 59.198 47.619 0.00 0.00 0.00 3.34
1902 2354 2.564504 GGTACTTCCCTTCTAACACCGT 59.435 50.000 0.00 0.00 0.00 4.83
1911 2363 5.662208 TCCCTTCTAACACCGTCCATTATTA 59.338 40.000 0.00 0.00 0.00 0.98
1921 2373 8.241497 ACACCGTCCATTATTAGTATCTTACA 57.759 34.615 0.00 0.00 0.00 2.41
1940 2392 8.605354 TCTTACAACGTTACTTCATATACACG 57.395 34.615 0.00 0.00 0.00 4.49
1945 2397 7.543172 ACAACGTTACTTCATATACACGTGATT 59.457 33.333 25.01 11.36 40.54 2.57
1949 2401 9.442033 CGTTACTTCATATACACGTGATTTCTA 57.558 33.333 25.01 3.60 0.00 2.10
1957 2409 9.619727 CATATACACGTGATTTCTAAAAACTCG 57.380 33.333 25.01 3.65 0.00 4.18
1977 2429 5.532406 ACTCGTTACACACTAAGTCCAACTA 59.468 40.000 0.00 0.00 0.00 2.24
1992 2444 0.034896 AACTACCAAGGCCAGTGACG 59.965 55.000 5.01 0.00 0.00 4.35
1998 2450 1.021202 CAAGGCCAGTGACGAAAACA 58.979 50.000 5.01 0.00 0.00 2.83
2011 3011 2.993545 CGAAAACATTCGGAAACTGCA 58.006 42.857 3.18 0.00 40.48 4.41
2096 3097 9.853555 CTCAGTGTAATAATATCTGGAGCTAAG 57.146 37.037 0.00 0.00 0.00 2.18
2168 3319 6.689663 TCTCCTTAGTAGATAGCTCAGCTA 57.310 41.667 9.36 9.36 45.55 3.32
2252 3416 5.947228 TTCTTGTTGAACATAAGCCTGAG 57.053 39.130 0.00 0.00 0.00 3.35
2278 3442 7.504924 TTCTTGATGAATTTCCTGTACGTTT 57.495 32.000 0.00 0.00 0.00 3.60
2406 3570 5.891551 CCTGGTAACTATAAACCCAGCAAAT 59.108 40.000 0.00 0.00 41.09 2.32
2668 3841 4.442705 CAGTACAGCGTTTAGAAAACACG 58.557 43.478 0.00 0.00 36.98 4.49
2856 4727 7.925703 GAATGCATCCATTAATTTCACTCTG 57.074 36.000 0.00 0.00 41.60 3.35
2860 4731 5.066893 GCATCCATTAATTTCACTCTGCTGA 59.933 40.000 0.00 0.00 0.00 4.26
2877 4748 0.179023 TGACAGCAGGCACAATGACA 60.179 50.000 0.00 0.00 0.00 3.58
2878 4749 1.171308 GACAGCAGGCACAATGACAT 58.829 50.000 0.00 0.00 0.00 3.06
2879 4750 0.885879 ACAGCAGGCACAATGACATG 59.114 50.000 0.00 0.00 0.00 3.21
2924 4795 7.106439 ACCATGCCGATTTGTATTATTTTGA 57.894 32.000 0.00 0.00 0.00 2.69
2960 4831 8.875803 TGATTCCAAGTATTCGTGTACATTAAC 58.124 33.333 0.00 0.00 0.00 2.01
3003 5123 4.934797 AGACCATGAAATCTTCCTTCCA 57.065 40.909 0.00 0.00 0.00 3.53
3009 5129 3.777087 TGAAATCTTCCTTCCAATGCCA 58.223 40.909 0.00 0.00 0.00 4.92
3024 5144 4.403432 CCAATGCCATGGAGTTGTTATCTT 59.597 41.667 18.40 0.00 43.54 2.40
3080 5200 4.509970 TCAATGTAAAACAGTGACAGTCCG 59.490 41.667 6.13 0.00 44.55 4.79
3081 5201 3.804786 TGTAAAACAGTGACAGTCCGA 57.195 42.857 0.00 0.00 0.00 4.55
3097 5217 4.091509 CAGTCCGATTTAGTTCGAAACTGG 59.908 45.833 0.00 0.00 42.50 4.00
3099 5219 5.047802 AGTCCGATTTAGTTCGAAACTGGTA 60.048 40.000 0.00 0.00 42.84 3.25
3102 5222 5.579511 CCGATTTAGTTCGAAACTGGTATGT 59.420 40.000 0.00 0.00 42.84 2.29
3106 5226 2.038557 AGTTCGAAACTGGTATGTGCCT 59.961 45.455 0.00 0.00 41.01 4.75
3107 5227 2.093306 TCGAAACTGGTATGTGCCTG 57.907 50.000 0.00 0.00 0.00 4.85
3108 5228 1.086696 CGAAACTGGTATGTGCCTGG 58.913 55.000 0.00 0.00 32.57 4.45
3110 5230 2.514803 GAAACTGGTATGTGCCTGGTT 58.485 47.619 0.00 0.00 39.58 3.67
3111 5231 1.909700 AACTGGTATGTGCCTGGTTG 58.090 50.000 0.00 0.00 32.57 3.77
3113 5233 0.680921 CTGGTATGTGCCTGGTTGGG 60.681 60.000 0.00 0.00 36.00 4.12
3114 5234 1.382629 GGTATGTGCCTGGTTGGGT 59.617 57.895 0.00 0.00 36.00 4.51
3115 5235 0.621609 GGTATGTGCCTGGTTGGGTA 59.378 55.000 0.00 0.00 36.00 3.69
3129 5249 1.061546 TGGGTAGGGTGAAGGTGAAC 58.938 55.000 0.00 0.00 0.00 3.18
3137 5257 1.896660 TGAAGGTGAACGGCAAGGC 60.897 57.895 0.00 0.00 0.00 4.35
3142 5262 3.659092 TGAACGGCAAGGCGCTTG 61.659 61.111 16.18 11.20 43.57 4.01
3158 5279 1.133790 GCTTGTTCCTGCATGCCTTAG 59.866 52.381 16.68 5.83 34.65 2.18
3163 5284 4.402829 TGTTCCTGCATGCCTTAGTTTTA 58.597 39.130 16.68 0.00 0.00 1.52
3168 5289 5.188948 TCCTGCATGCCTTAGTTTTAGAGTA 59.811 40.000 16.68 0.00 0.00 2.59
3172 5293 6.884295 TGCATGCCTTAGTTTTAGAGTATTGT 59.116 34.615 16.68 0.00 0.00 2.71
3177 5298 8.255905 TGCCTTAGTTTTAGAGTATTGTAGACC 58.744 37.037 0.00 0.00 0.00 3.85
3196 5317 2.293856 ACCTGGAGTGGTCCTTGGATAT 60.294 50.000 0.00 0.00 44.30 1.63
3197 5318 2.780010 CCTGGAGTGGTCCTTGGATATT 59.220 50.000 0.00 0.00 44.30 1.28
3198 5319 3.181450 CCTGGAGTGGTCCTTGGATATTC 60.181 52.174 0.00 0.00 44.30 1.75
3199 5320 2.434336 TGGAGTGGTCCTTGGATATTCG 59.566 50.000 0.00 0.00 44.30 3.34
3234 5357 4.153475 ACGCGTATTTTATGTGCAACTTCT 59.847 37.500 11.67 0.00 38.04 2.85
3256 5379 3.391296 TGTCAGCCTCTTTCTTTGTACCT 59.609 43.478 0.00 0.00 0.00 3.08
3436 5559 2.839098 CAGTCAGCCACCAGGGTT 59.161 61.111 0.00 0.00 45.14 4.11
3468 5591 2.547826 GGTTGGTAGCCGTAAGATGAC 58.452 52.381 0.00 0.00 43.02 3.06
3499 5622 4.743057 TGATCTGTCATCGATCCAGTTT 57.257 40.909 17.01 9.25 37.15 2.66
3520 5643 1.743958 CCACTCGGTACTTCGACAGAT 59.256 52.381 0.00 0.00 35.18 2.90
3530 5653 5.163499 GGTACTTCGACAGATGGAGAATTCT 60.163 44.000 7.95 7.95 0.00 2.40
3578 5701 1.942657 GGCATGCTTCGCTCAAGATTA 59.057 47.619 18.92 0.00 33.29 1.75
3579 5702 2.551459 GGCATGCTTCGCTCAAGATTAT 59.449 45.455 18.92 0.00 33.29 1.28
3590 5713 5.009710 TCGCTCAAGATTATGAAGATACGGT 59.990 40.000 0.00 0.00 0.00 4.83
3591 5714 5.692204 CGCTCAAGATTATGAAGATACGGTT 59.308 40.000 0.00 0.00 0.00 4.44
3592 5715 6.346120 CGCTCAAGATTATGAAGATACGGTTG 60.346 42.308 0.00 0.00 0.00 3.77
3593 5716 6.564873 GCTCAAGATTATGAAGATACGGTTGC 60.565 42.308 0.00 0.00 0.00 4.17
3602 5730 3.261981 AGATACGGTTGCTCGGAATTT 57.738 42.857 0.00 0.00 0.00 1.82
3690 5820 4.164204 AGAAGATAGGCAGGGATTAGACC 58.836 47.826 0.00 0.00 0.00 3.85
3705 5835 4.903045 TTAGACCCAGTTCCTTAAGGTG 57.097 45.455 21.04 12.02 36.34 4.00
3733 5867 7.357777 GCAGTGGTTTTAGTTAAATTTACGTGC 60.358 37.037 0.00 0.00 0.00 5.34
3734 5868 7.113825 CAGTGGTTTTAGTTAAATTTACGTGCC 59.886 37.037 0.00 0.00 0.00 5.01
3735 5869 6.363088 GTGGTTTTAGTTAAATTTACGTGCCC 59.637 38.462 0.00 0.00 0.00 5.36
3736 5870 6.040166 TGGTTTTAGTTAAATTTACGTGCCCA 59.960 34.615 0.00 0.00 0.00 5.36
3737 5871 7.092079 GGTTTTAGTTAAATTTACGTGCCCAT 58.908 34.615 0.00 0.00 0.00 4.00
3738 5872 8.242739 GGTTTTAGTTAAATTTACGTGCCCATA 58.757 33.333 0.00 0.00 0.00 2.74
3739 5873 9.791820 GTTTTAGTTAAATTTACGTGCCCATAT 57.208 29.630 0.00 0.00 0.00 1.78
3740 5874 9.790389 TTTTAGTTAAATTTACGTGCCCATATG 57.210 29.630 0.00 0.00 0.00 1.78
3767 5901 3.517296 TTGTGTCTGAATTAGGCCCAA 57.483 42.857 0.00 0.00 0.00 4.12
3779 5913 1.971695 GGCCCAACTGTTTCGGAGG 60.972 63.158 7.44 0.00 0.00 4.30
3795 5929 3.969976 TCGGAGGAGGATTTGAATCTGAT 59.030 43.478 3.94 0.00 35.73 2.90
3800 5934 4.164988 AGGAGGATTTGAATCTGATTCCGT 59.835 41.667 23.62 12.01 38.50 4.69
3802 5936 5.102953 AGGATTTGAATCTGATTCCGTGA 57.897 39.130 23.62 10.14 38.50 4.35
3804 5938 4.635765 GGATTTGAATCTGATTCCGTGACA 59.364 41.667 23.62 5.67 38.50 3.58
3806 5940 6.183360 GGATTTGAATCTGATTCCGTGACATT 60.183 38.462 23.62 4.32 38.50 2.71
3833 5971 4.335416 TCCCCAGATTAAAGTTGCTTCAG 58.665 43.478 0.00 0.00 0.00 3.02
3843 5981 7.750229 TTAAAGTTGCTTCAGAGATGATTGT 57.250 32.000 0.00 0.00 0.00 2.71
3856 5994 3.392616 AGATGATTGTGATACCTGGTCCC 59.607 47.826 0.63 0.00 0.00 4.46
3866 6004 4.844085 TGATACCTGGTCCCGATGATAAAT 59.156 41.667 0.63 0.00 0.00 1.40
3871 6009 3.319220 TGGTCCCGATGATAAATGGGTA 58.681 45.455 0.00 0.00 42.54 3.69
3888 6026 4.223953 TGGGTAATGTTTGTGGGCTAAAA 58.776 39.130 0.00 0.00 0.00 1.52
3912 6050 5.106157 ACGTTGAGCCCTTTTATCAATCAAG 60.106 40.000 0.00 0.00 35.56 3.02
3920 6058 6.158598 CCCTTTTATCAATCAAGGTGTGTTG 58.841 40.000 0.00 0.00 36.12 3.33
3967 6106 4.108699 GCAATGTGCATGCTACCTAAAA 57.891 40.909 20.33 0.00 44.26 1.52
3974 6113 7.403312 TGTGCATGCTACCTAAAATGTTTAT 57.597 32.000 20.33 0.00 0.00 1.40
3975 6114 7.257003 TGTGCATGCTACCTAAAATGTTTATG 58.743 34.615 20.33 0.00 0.00 1.90
3979 6118 7.013846 GCATGCTACCTAAAATGTTTATGGGTA 59.986 37.037 11.37 0.00 0.00 3.69
3981 6120 8.685838 TGCTACCTAAAATGTTTATGGGTATC 57.314 34.615 0.00 0.00 0.00 2.24
3982 6121 8.499406 TGCTACCTAAAATGTTTATGGGTATCT 58.501 33.333 0.00 0.00 0.00 1.98
3998 6137 4.938226 GGGTATCTTCTGAAGGAACAACTG 59.062 45.833 16.83 0.00 0.00 3.16
4002 6141 2.154854 TCTGAAGGAACAACTGAGCG 57.845 50.000 0.00 0.00 0.00 5.03
4010 6149 3.037833 CAACTGAGCGAGCGCACA 61.038 61.111 17.68 15.59 44.88 4.57
4014 6153 3.642008 CTGAGCGAGCGCACAAAGC 62.642 63.158 17.68 7.35 44.88 3.51
4015 6154 3.716006 GAGCGAGCGCACAAAGCA 61.716 61.111 17.68 0.00 46.13 3.91
4016 6155 3.240606 GAGCGAGCGCACAAAGCAA 62.241 57.895 17.68 0.00 46.13 3.91
4017 6156 3.093449 GCGAGCGCACAAAGCAAC 61.093 61.111 11.47 0.00 46.13 4.17
4018 6157 2.633657 CGAGCGCACAAAGCAACT 59.366 55.556 11.47 0.00 46.13 3.16
4019 6158 1.859398 CGAGCGCACAAAGCAACTA 59.141 52.632 11.47 0.00 46.13 2.24
4020 6159 0.179240 CGAGCGCACAAAGCAACTAG 60.179 55.000 11.47 0.00 46.13 2.57
4021 6160 0.166814 GAGCGCACAAAGCAACTAGG 59.833 55.000 11.47 0.00 46.13 3.02
4022 6161 1.442688 GCGCACAAAGCAACTAGGC 60.443 57.895 0.30 0.00 46.13 3.93
4023 6162 1.948508 CGCACAAAGCAACTAGGCA 59.051 52.632 0.00 0.00 46.13 4.75
4024 6163 0.310543 CGCACAAAGCAACTAGGCAA 59.689 50.000 0.00 0.00 46.13 4.52
4025 6164 1.664016 CGCACAAAGCAACTAGGCAAG 60.664 52.381 0.00 0.00 46.13 4.01
4026 6165 1.338020 GCACAAAGCAACTAGGCAAGT 59.662 47.619 0.00 0.00 44.79 3.16
4027 6166 2.859806 GCACAAAGCAACTAGGCAAGTG 60.860 50.000 0.00 1.12 44.79 3.16
4028 6167 1.956477 ACAAAGCAACTAGGCAAGTGG 59.044 47.619 0.00 0.00 38.88 4.00
4039 6178 3.953201 GCAAGTGGCCATCAATAGC 57.047 52.632 9.72 4.11 36.11 2.97
4040 6179 1.105457 GCAAGTGGCCATCAATAGCA 58.895 50.000 9.72 0.00 36.11 3.49
4041 6180 1.066605 GCAAGTGGCCATCAATAGCAG 59.933 52.381 9.72 0.00 36.11 4.24
4042 6181 2.372264 CAAGTGGCCATCAATAGCAGT 58.628 47.619 9.72 0.00 0.00 4.40
4043 6182 2.756760 CAAGTGGCCATCAATAGCAGTT 59.243 45.455 9.72 0.00 0.00 3.16
4044 6183 3.931907 AGTGGCCATCAATAGCAGTTA 57.068 42.857 9.72 0.00 0.00 2.24
4045 6184 3.813443 AGTGGCCATCAATAGCAGTTAG 58.187 45.455 9.72 0.00 0.00 2.34
4046 6185 3.455910 AGTGGCCATCAATAGCAGTTAGA 59.544 43.478 9.72 0.00 0.00 2.10
4047 6186 4.103785 AGTGGCCATCAATAGCAGTTAGAT 59.896 41.667 9.72 0.00 0.00 1.98
4048 6187 4.214971 GTGGCCATCAATAGCAGTTAGATG 59.785 45.833 9.72 0.00 36.67 2.90
4049 6188 4.102996 TGGCCATCAATAGCAGTTAGATGA 59.897 41.667 0.00 0.00 38.62 2.92
4050 6189 4.453819 GGCCATCAATAGCAGTTAGATGAC 59.546 45.833 0.00 0.00 38.62 3.06
4051 6190 4.453819 GCCATCAATAGCAGTTAGATGACC 59.546 45.833 0.00 0.00 38.62 4.02
4052 6191 4.687948 CCATCAATAGCAGTTAGATGACCG 59.312 45.833 0.00 0.00 38.62 4.79
4053 6192 3.717707 TCAATAGCAGTTAGATGACCGC 58.282 45.455 0.00 0.00 0.00 5.68
4054 6193 3.132111 TCAATAGCAGTTAGATGACCGCA 59.868 43.478 0.00 0.00 0.00 5.69
4055 6194 2.871182 TAGCAGTTAGATGACCGCAG 57.129 50.000 0.00 0.00 0.00 5.18
4056 6195 0.460987 AGCAGTTAGATGACCGCAGC 60.461 55.000 0.00 0.00 0.00 5.25
4057 6196 1.756375 GCAGTTAGATGACCGCAGCG 61.756 60.000 8.18 8.18 35.08 5.18
4058 6197 1.519455 AGTTAGATGACCGCAGCGC 60.519 57.895 10.07 0.00 35.08 5.92
4070 6209 4.139420 CAGCGCGTCTTCGGCTTG 62.139 66.667 8.43 0.00 39.90 4.01
4073 6212 3.843240 CGCGTCTTCGGCTTGCTC 61.843 66.667 0.00 0.00 37.56 4.26
4074 6213 3.491652 GCGTCTTCGGCTTGCTCC 61.492 66.667 0.00 0.00 37.56 4.70
4075 6214 2.048222 CGTCTTCGGCTTGCTCCA 60.048 61.111 0.00 0.00 0.00 3.86
4076 6215 2.097038 CGTCTTCGGCTTGCTCCAG 61.097 63.158 0.00 0.00 0.00 3.86
4077 6216 1.004440 GTCTTCGGCTTGCTCCAGT 60.004 57.895 0.00 0.00 0.00 4.00
4078 6217 0.246635 GTCTTCGGCTTGCTCCAGTA 59.753 55.000 0.00 0.00 0.00 2.74
4079 6218 0.246635 TCTTCGGCTTGCTCCAGTAC 59.753 55.000 0.00 0.00 0.00 2.73
4080 6219 0.247736 CTTCGGCTTGCTCCAGTACT 59.752 55.000 0.00 0.00 0.00 2.73
4081 6220 0.685097 TTCGGCTTGCTCCAGTACTT 59.315 50.000 0.00 0.00 0.00 2.24
4082 6221 1.552578 TCGGCTTGCTCCAGTACTTA 58.447 50.000 0.00 0.00 0.00 2.24
4083 6222 2.108168 TCGGCTTGCTCCAGTACTTAT 58.892 47.619 0.00 0.00 0.00 1.73
4084 6223 3.293337 TCGGCTTGCTCCAGTACTTATA 58.707 45.455 0.00 0.00 0.00 0.98
4085 6224 3.318275 TCGGCTTGCTCCAGTACTTATAG 59.682 47.826 0.00 0.00 0.00 1.31
4086 6225 3.068307 CGGCTTGCTCCAGTACTTATAGT 59.932 47.826 0.00 0.00 0.00 2.12
4087 6226 4.623002 GGCTTGCTCCAGTACTTATAGTC 58.377 47.826 0.00 0.00 0.00 2.59
4088 6227 4.291783 GCTTGCTCCAGTACTTATAGTCG 58.708 47.826 0.00 0.00 0.00 4.18
4089 6228 4.202030 GCTTGCTCCAGTACTTATAGTCGT 60.202 45.833 0.00 0.00 0.00 4.34
4090 6229 5.496133 TTGCTCCAGTACTTATAGTCGTC 57.504 43.478 0.00 0.00 0.00 4.20
4091 6230 3.558829 TGCTCCAGTACTTATAGTCGTCG 59.441 47.826 0.00 0.00 0.00 5.12
4092 6231 3.606615 GCTCCAGTACTTATAGTCGTCGC 60.607 52.174 0.00 0.00 0.00 5.19
4093 6232 3.801698 TCCAGTACTTATAGTCGTCGCT 58.198 45.455 0.00 0.00 0.00 4.93
4094 6233 4.948847 TCCAGTACTTATAGTCGTCGCTA 58.051 43.478 0.00 0.00 0.00 4.26
4095 6234 4.987285 TCCAGTACTTATAGTCGTCGCTAG 59.013 45.833 0.00 0.00 0.00 3.42
4096 6235 4.987285 CCAGTACTTATAGTCGTCGCTAGA 59.013 45.833 0.00 0.00 0.00 2.43
4097 6236 5.638657 CCAGTACTTATAGTCGTCGCTAGAT 59.361 44.000 0.00 0.00 0.00 1.98
4098 6237 6.401260 CCAGTACTTATAGTCGTCGCTAGATG 60.401 46.154 0.00 0.00 34.75 2.90
4099 6238 6.365518 CAGTACTTATAGTCGTCGCTAGATGA 59.634 42.308 0.00 0.00 39.89 2.92
4100 6239 7.063662 CAGTACTTATAGTCGTCGCTAGATGAT 59.936 40.741 0.00 0.00 43.54 2.45
4101 6240 6.804770 ACTTATAGTCGTCGCTAGATGATT 57.195 37.500 0.00 0.00 43.54 2.57
4102 6241 7.204496 ACTTATAGTCGTCGCTAGATGATTT 57.796 36.000 0.00 0.00 43.54 2.17
4103 6242 8.320396 ACTTATAGTCGTCGCTAGATGATTTA 57.680 34.615 0.00 0.00 43.54 1.40
4104 6243 8.444715 ACTTATAGTCGTCGCTAGATGATTTAG 58.555 37.037 0.00 0.00 43.54 1.85
4105 6244 4.491234 AGTCGTCGCTAGATGATTTAGG 57.509 45.455 0.00 0.00 43.54 2.69
4106 6245 2.981140 GTCGTCGCTAGATGATTTAGGC 59.019 50.000 0.00 0.00 43.54 3.93
4107 6246 1.979469 CGTCGCTAGATGATTTAGGCG 59.021 52.381 0.00 0.00 43.22 5.52
4108 6247 1.721926 GTCGCTAGATGATTTAGGCGC 59.278 52.381 0.00 0.00 41.91 6.53
4109 6248 0.710567 CGCTAGATGATTTAGGCGCG 59.289 55.000 0.00 0.00 36.46 6.86
4110 6249 1.784525 GCTAGATGATTTAGGCGCGT 58.215 50.000 8.43 8.08 0.00 6.01
4111 6250 1.721926 GCTAGATGATTTAGGCGCGTC 59.278 52.381 5.57 0.21 0.00 5.19
4112 6251 2.608261 GCTAGATGATTTAGGCGCGTCT 60.608 50.000 20.79 20.79 0.00 4.18
4113 6252 2.604046 AGATGATTTAGGCGCGTCTT 57.396 45.000 22.56 0.00 0.00 3.01
4114 6253 2.474816 AGATGATTTAGGCGCGTCTTC 58.525 47.619 22.56 11.88 0.00 2.87
4115 6254 1.190323 GATGATTTAGGCGCGTCTTCG 59.810 52.381 22.56 0.00 40.37 3.79
4116 6255 0.804544 TGATTTAGGCGCGTCTTCGG 60.805 55.000 22.56 0.00 37.56 4.30
4117 6256 0.804933 GATTTAGGCGCGTCTTCGGT 60.805 55.000 22.56 2.33 37.56 4.69
4118 6257 0.390735 ATTTAGGCGCGTCTTCGGTT 60.391 50.000 22.56 0.00 37.56 4.44
4119 6258 0.600782 TTTAGGCGCGTCTTCGGTTT 60.601 50.000 22.56 0.00 37.56 3.27
4120 6259 1.286354 TTAGGCGCGTCTTCGGTTTG 61.286 55.000 22.56 0.00 37.56 2.93
4121 6260 4.736631 GGCGCGTCTTCGGTTTGC 62.737 66.667 8.43 0.00 37.56 3.68
4122 6261 3.712881 GCGCGTCTTCGGTTTGCT 61.713 61.111 8.43 0.00 37.56 3.91
4123 6262 2.470286 CGCGTCTTCGGTTTGCTC 59.530 61.111 0.00 0.00 37.56 4.26
4124 6263 2.861006 GCGTCTTCGGTTTGCTCC 59.139 61.111 0.00 0.00 37.56 4.70
4125 6264 1.959226 GCGTCTTCGGTTTGCTCCA 60.959 57.895 0.00 0.00 37.56 3.86
4126 6265 1.901650 GCGTCTTCGGTTTGCTCCAG 61.902 60.000 0.00 0.00 37.56 3.86
4127 6266 0.600255 CGTCTTCGGTTTGCTCCAGT 60.600 55.000 0.00 0.00 0.00 4.00
4128 6267 1.336517 CGTCTTCGGTTTGCTCCAGTA 60.337 52.381 0.00 0.00 0.00 2.74
4129 6268 2.067013 GTCTTCGGTTTGCTCCAGTAC 58.933 52.381 0.00 0.00 0.00 2.73
4130 6269 1.968493 TCTTCGGTTTGCTCCAGTACT 59.032 47.619 0.00 0.00 0.00 2.73
4131 6270 2.069273 CTTCGGTTTGCTCCAGTACTG 58.931 52.381 16.34 16.34 0.00 2.74
4132 6271 1.045407 TCGGTTTGCTCCAGTACTGT 58.955 50.000 21.18 0.00 0.00 3.55
4133 6272 1.000506 TCGGTTTGCTCCAGTACTGTC 59.999 52.381 21.18 10.46 0.00 3.51
4134 6273 1.429463 GGTTTGCTCCAGTACTGTCG 58.571 55.000 21.18 12.37 0.00 4.35
4135 6274 0.790814 GTTTGCTCCAGTACTGTCGC 59.209 55.000 21.18 20.84 0.00 5.19
4136 6275 0.679505 TTTGCTCCAGTACTGTCGCT 59.320 50.000 24.88 0.00 0.00 4.93
4137 6276 1.541379 TTGCTCCAGTACTGTCGCTA 58.459 50.000 24.88 18.58 0.00 4.26
4138 6277 1.095600 TGCTCCAGTACTGTCGCTAG 58.904 55.000 24.88 14.64 0.00 3.42
4139 6278 1.339727 TGCTCCAGTACTGTCGCTAGA 60.340 52.381 24.88 13.52 0.00 2.43
4140 6279 1.950909 GCTCCAGTACTGTCGCTAGAT 59.049 52.381 21.18 0.00 0.00 1.98
4141 6280 2.287308 GCTCCAGTACTGTCGCTAGATG 60.287 54.545 21.18 3.10 0.00 2.90
4142 6281 2.292016 CTCCAGTACTGTCGCTAGATGG 59.708 54.545 21.18 3.23 0.00 3.51
4143 6282 2.025155 CCAGTACTGTCGCTAGATGGT 58.975 52.381 21.18 0.00 0.00 3.55
4144 6283 2.033550 CCAGTACTGTCGCTAGATGGTC 59.966 54.545 21.18 0.00 0.00 4.02
4145 6284 2.946329 CAGTACTGTCGCTAGATGGTCT 59.054 50.000 15.06 0.00 0.00 3.85
4146 6285 4.127907 CAGTACTGTCGCTAGATGGTCTA 58.872 47.826 15.06 0.00 0.00 2.59
4147 6286 4.757657 CAGTACTGTCGCTAGATGGTCTAT 59.242 45.833 15.06 0.00 0.00 1.98
4148 6287 5.932883 CAGTACTGTCGCTAGATGGTCTATA 59.067 44.000 15.06 0.00 0.00 1.31
4149 6288 6.427242 CAGTACTGTCGCTAGATGGTCTATAA 59.573 42.308 15.06 0.00 0.00 0.98
4150 6289 6.996879 AGTACTGTCGCTAGATGGTCTATAAA 59.003 38.462 0.00 0.00 0.00 1.40
4151 6290 6.902771 ACTGTCGCTAGATGGTCTATAAAT 57.097 37.500 0.00 0.00 0.00 1.40
4152 6291 6.915349 ACTGTCGCTAGATGGTCTATAAATC 58.085 40.000 0.00 0.00 0.00 2.17
4153 6292 6.717540 ACTGTCGCTAGATGGTCTATAAATCT 59.282 38.462 0.00 0.00 34.99 2.40
4154 6293 6.914259 TGTCGCTAGATGGTCTATAAATCTG 58.086 40.000 0.00 0.00 32.92 2.90
4155 6294 6.715264 TGTCGCTAGATGGTCTATAAATCTGA 59.285 38.462 0.00 0.00 32.92 3.27
4156 6295 7.230712 TGTCGCTAGATGGTCTATAAATCTGAA 59.769 37.037 0.00 0.00 32.92 3.02
4157 6296 8.247562 GTCGCTAGATGGTCTATAAATCTGAAT 58.752 37.037 0.00 0.00 32.92 2.57
4158 6297 8.246871 TCGCTAGATGGTCTATAAATCTGAATG 58.753 37.037 0.00 0.00 32.92 2.67
4159 6298 8.031864 CGCTAGATGGTCTATAAATCTGAATGT 58.968 37.037 0.00 0.00 32.92 2.71
4221 6360 8.514330 AGATAATGAATAGATCGTACTCCCTC 57.486 38.462 0.00 0.00 0.00 4.30
4222 6361 8.333235 AGATAATGAATAGATCGTACTCCCTCT 58.667 37.037 0.00 0.00 0.00 3.69
4223 6362 6.827586 AATGAATAGATCGTACTCCCTCTC 57.172 41.667 0.00 0.00 0.00 3.20
4224 6363 5.570205 TGAATAGATCGTACTCCCTCTCT 57.430 43.478 0.00 0.00 0.00 3.10
4225 6364 5.553123 TGAATAGATCGTACTCCCTCTCTC 58.447 45.833 0.00 0.00 0.00 3.20
4226 6365 5.308497 TGAATAGATCGTACTCCCTCTCTCT 59.692 44.000 0.00 0.00 0.00 3.10
4227 6366 3.764237 AGATCGTACTCCCTCTCTCTC 57.236 52.381 0.00 0.00 0.00 3.20
4228 6367 3.042682 AGATCGTACTCCCTCTCTCTCA 58.957 50.000 0.00 0.00 0.00 3.27
4229 6368 2.992124 TCGTACTCCCTCTCTCTCAG 57.008 55.000 0.00 0.00 0.00 3.35
4230 6369 2.189676 TCGTACTCCCTCTCTCTCAGT 58.810 52.381 0.00 0.00 0.00 3.41
4231 6370 2.572556 TCGTACTCCCTCTCTCTCAGTT 59.427 50.000 0.00 0.00 0.00 3.16
4232 6371 3.009253 TCGTACTCCCTCTCTCTCAGTTT 59.991 47.826 0.00 0.00 0.00 2.66
4233 6372 4.224594 TCGTACTCCCTCTCTCTCAGTTTA 59.775 45.833 0.00 0.00 0.00 2.01
4234 6373 4.333372 CGTACTCCCTCTCTCTCAGTTTAC 59.667 50.000 0.00 0.00 0.00 2.01
4235 6374 4.390129 ACTCCCTCTCTCTCAGTTTACA 57.610 45.455 0.00 0.00 0.00 2.41
4236 6375 4.083565 ACTCCCTCTCTCTCAGTTTACAC 58.916 47.826 0.00 0.00 0.00 2.90
4237 6376 3.082548 TCCCTCTCTCTCAGTTTACACG 58.917 50.000 0.00 0.00 0.00 4.49
4238 6377 2.164624 CCCTCTCTCTCAGTTTACACGG 59.835 54.545 0.00 0.00 0.00 4.94
4239 6378 2.416162 CCTCTCTCTCAGTTTACACGGC 60.416 54.545 0.00 0.00 0.00 5.68
4240 6379 1.199327 TCTCTCTCAGTTTACACGGCG 59.801 52.381 4.80 4.80 0.00 6.46
4241 6380 0.956633 TCTCTCAGTTTACACGGCGT 59.043 50.000 6.77 6.77 0.00 5.68
4242 6381 1.060713 CTCTCAGTTTACACGGCGTG 58.939 55.000 35.89 35.89 39.75 5.34
4243 6382 0.942410 TCTCAGTTTACACGGCGTGC 60.942 55.000 37.21 21.99 36.98 5.34
4244 6383 2.170036 CAGTTTACACGGCGTGCG 59.830 61.111 37.21 17.85 36.98 5.34
4245 6384 3.708734 AGTTTACACGGCGTGCGC 61.709 61.111 37.21 23.85 36.98 6.09
4248 6387 4.696940 TTACACGGCGTGCGCGTA 62.697 61.111 37.21 20.60 43.06 4.42
4256 6395 4.564116 CGTGCGCGTACCCCTAGG 62.564 72.222 21.71 0.06 40.04 3.02
4258 6397 3.142838 TGCGCGTACCCCTAGGTC 61.143 66.667 8.43 0.00 46.45 3.85
4259 6398 4.261781 GCGCGTACCCCTAGGTCG 62.262 72.222 8.43 8.12 46.45 4.79
4260 6399 2.825836 CGCGTACCCCTAGGTCGT 60.826 66.667 8.29 6.00 46.45 4.34
4261 6400 2.828128 CGCGTACCCCTAGGTCGTC 61.828 68.421 8.29 3.46 46.45 4.20
4262 6401 1.750399 GCGTACCCCTAGGTCGTCA 60.750 63.158 8.29 0.00 46.45 4.35
4263 6402 1.315257 GCGTACCCCTAGGTCGTCAA 61.315 60.000 8.29 0.00 46.45 3.18
4264 6403 1.396653 CGTACCCCTAGGTCGTCAAT 58.603 55.000 8.29 0.00 46.45 2.57
4265 6404 1.753073 CGTACCCCTAGGTCGTCAATT 59.247 52.381 8.29 0.00 46.45 2.32
4266 6405 2.167075 CGTACCCCTAGGTCGTCAATTT 59.833 50.000 8.29 0.00 46.45 1.82
4267 6406 2.781681 ACCCCTAGGTCGTCAATTTG 57.218 50.000 8.29 0.00 46.45 2.32
4268 6407 2.262637 ACCCCTAGGTCGTCAATTTGA 58.737 47.619 8.29 0.00 46.45 2.69
4269 6408 2.027469 ACCCCTAGGTCGTCAATTTGAC 60.027 50.000 17.76 17.76 46.45 3.18
4270 6409 5.201262 ACCCCTAGGTCGTCAATTTGACC 62.201 52.174 20.87 10.15 46.45 4.02
4278 6417 5.622770 GTCGTCAATTTGACCAACCTAAT 57.377 39.130 20.87 0.00 44.20 1.73
4279 6418 6.730960 GTCGTCAATTTGACCAACCTAATA 57.269 37.500 20.87 0.00 44.20 0.98
4280 6419 6.540205 GTCGTCAATTTGACCAACCTAATAC 58.460 40.000 20.87 5.03 44.20 1.89
4281 6420 6.148150 GTCGTCAATTTGACCAACCTAATACA 59.852 38.462 20.87 0.00 44.20 2.29
4282 6421 6.711194 TCGTCAATTTGACCAACCTAATACAA 59.289 34.615 20.87 0.00 44.20 2.41
4283 6422 7.021196 CGTCAATTTGACCAACCTAATACAAG 58.979 38.462 20.87 1.46 44.20 3.16
4284 6423 7.308348 CGTCAATTTGACCAACCTAATACAAGT 60.308 37.037 20.87 0.00 44.20 3.16
4285 6424 8.021396 GTCAATTTGACCAACCTAATACAAGTC 58.979 37.037 17.07 0.00 41.37 3.01
4286 6425 7.721842 TCAATTTGACCAACCTAATACAAGTCA 59.278 33.333 0.00 0.00 0.00 3.41
4287 6426 8.522830 CAATTTGACCAACCTAATACAAGTCAT 58.477 33.333 0.00 0.00 33.21 3.06
4288 6427 9.747898 AATTTGACCAACCTAATACAAGTCATA 57.252 29.630 0.00 0.00 33.21 2.15
4289 6428 9.920946 ATTTGACCAACCTAATACAAGTCATAT 57.079 29.630 0.00 0.00 33.21 1.78
4390 6529 7.961326 ATTAGAGTGATAAAATTGGCAACCT 57.039 32.000 0.00 0.00 0.00 3.50
4392 6531 8.506168 TTAGAGTGATAAAATTGGCAACCTAG 57.494 34.615 0.00 0.00 0.00 3.02
4393 6532 5.888161 AGAGTGATAAAATTGGCAACCTAGG 59.112 40.000 7.41 7.41 0.00 3.02
4394 6533 5.580022 AGTGATAAAATTGGCAACCTAGGT 58.420 37.500 9.21 9.21 0.00 3.08
4395 6534 6.727394 AGTGATAAAATTGGCAACCTAGGTA 58.273 36.000 16.67 0.00 0.00 3.08
4396 6535 7.354312 AGTGATAAAATTGGCAACCTAGGTAT 58.646 34.615 16.67 0.83 0.00 2.73
4397 6536 8.499406 AGTGATAAAATTGGCAACCTAGGTATA 58.501 33.333 16.67 0.00 0.00 1.47
4398 6537 8.565416 GTGATAAAATTGGCAACCTAGGTATAC 58.435 37.037 16.67 8.74 0.00 1.47
4399 6538 7.442969 TGATAAAATTGGCAACCTAGGTATACG 59.557 37.037 16.67 5.52 0.00 3.06
4400 6539 2.607631 TTGGCAACCTAGGTATACGC 57.392 50.000 16.67 15.11 0.00 4.42
4401 6540 0.386476 TGGCAACCTAGGTATACGCG 59.614 55.000 16.67 3.53 0.00 6.01
4402 6541 0.942884 GGCAACCTAGGTATACGCGC 60.943 60.000 16.67 10.85 0.00 6.86
4403 6542 0.249155 GCAACCTAGGTATACGCGCA 60.249 55.000 16.67 0.00 0.00 6.09
4404 6543 1.767289 CAACCTAGGTATACGCGCAG 58.233 55.000 16.67 2.42 0.00 5.18
4405 6544 0.672342 AACCTAGGTATACGCGCAGG 59.328 55.000 16.67 6.39 0.00 4.85
4406 6545 0.179009 ACCTAGGTATACGCGCAGGA 60.179 55.000 14.41 0.00 0.00 3.86
4407 6546 0.522180 CCTAGGTATACGCGCAGGAG 59.478 60.000 5.73 0.00 0.00 3.69
4408 6547 0.522180 CTAGGTATACGCGCAGGAGG 59.478 60.000 5.73 0.00 0.00 4.30
4409 6548 0.109153 TAGGTATACGCGCAGGAGGA 59.891 55.000 5.73 0.00 0.00 3.71
4410 6549 1.173444 AGGTATACGCGCAGGAGGAG 61.173 60.000 5.73 0.00 0.00 3.69
4411 6550 1.286260 GTATACGCGCAGGAGGAGG 59.714 63.158 5.73 0.00 0.00 4.30
4412 6551 1.901948 TATACGCGCAGGAGGAGGG 60.902 63.158 5.73 0.00 35.35 4.30
4413 6552 2.347691 TATACGCGCAGGAGGAGGGA 62.348 60.000 5.73 0.00 33.44 4.20
4416 6555 2.442272 GCGCAGGAGGAGGGAGTA 60.442 66.667 0.30 0.00 0.00 2.59
4417 6556 2.494530 GCGCAGGAGGAGGGAGTAG 61.495 68.421 0.30 0.00 0.00 2.57
4418 6557 1.830408 CGCAGGAGGAGGGAGTAGG 60.830 68.421 0.00 0.00 0.00 3.18
4419 6558 1.311747 GCAGGAGGAGGGAGTAGGT 59.688 63.158 0.00 0.00 0.00 3.08
4420 6559 0.325765 GCAGGAGGAGGGAGTAGGTT 60.326 60.000 0.00 0.00 0.00 3.50
4421 6560 1.902141 GCAGGAGGAGGGAGTAGGTTT 60.902 57.143 0.00 0.00 0.00 3.27
4422 6561 2.552367 CAGGAGGAGGGAGTAGGTTTT 58.448 52.381 0.00 0.00 0.00 2.43
4423 6562 2.913617 CAGGAGGAGGGAGTAGGTTTTT 59.086 50.000 0.00 0.00 0.00 1.94
4424 6563 3.055021 CAGGAGGAGGGAGTAGGTTTTTC 60.055 52.174 0.00 0.00 0.00 2.29
4425 6564 3.181394 AGGAGGAGGGAGTAGGTTTTTCT 60.181 47.826 0.00 0.00 0.00 2.52
4426 6565 3.587951 GGAGGAGGGAGTAGGTTTTTCTT 59.412 47.826 0.00 0.00 0.00 2.52
4427 6566 4.781621 GGAGGAGGGAGTAGGTTTTTCTTA 59.218 45.833 0.00 0.00 0.00 2.10
4428 6567 5.250082 GGAGGAGGGAGTAGGTTTTTCTTAA 59.750 44.000 0.00 0.00 0.00 1.85
4429 6568 6.240089 GGAGGAGGGAGTAGGTTTTTCTTAAA 60.240 42.308 0.00 0.00 0.00 1.52
4430 6569 7.157947 AGGAGGGAGTAGGTTTTTCTTAAAA 57.842 36.000 0.00 0.00 0.00 1.52
4431 6570 7.589081 AGGAGGGAGTAGGTTTTTCTTAAAAA 58.411 34.615 0.00 0.00 37.99 1.94
4452 6591 6.944234 AAAAATAGCAGTTAGGATGTAGGC 57.056 37.500 0.00 0.00 0.00 3.93
4453 6592 4.625607 AATAGCAGTTAGGATGTAGGCC 57.374 45.455 0.00 0.00 0.00 5.19
4454 6593 1.879575 AGCAGTTAGGATGTAGGCCA 58.120 50.000 5.01 0.00 0.00 5.36
4455 6594 2.196595 AGCAGTTAGGATGTAGGCCAA 58.803 47.619 5.01 0.00 0.00 4.52
4456 6595 2.171448 AGCAGTTAGGATGTAGGCCAAG 59.829 50.000 5.01 0.00 0.00 3.61
4457 6596 2.170607 GCAGTTAGGATGTAGGCCAAGA 59.829 50.000 5.01 0.00 0.00 3.02
4458 6597 3.742640 GCAGTTAGGATGTAGGCCAAGAG 60.743 52.174 5.01 0.00 0.00 2.85
4459 6598 3.041946 AGTTAGGATGTAGGCCAAGAGG 58.958 50.000 5.01 0.00 38.23 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
105 107 6.822667 TTGTGGCATATGGTTCATATCATC 57.177 37.500 4.56 0.00 35.18 2.92
240 249 9.964354 TCACTTGGCATTATATAGCTTTCATAT 57.036 29.630 0.00 0.00 0.00 1.78
241 250 9.791801 TTCACTTGGCATTATATAGCTTTCATA 57.208 29.630 0.00 0.00 0.00 2.15
289 299 2.949177 TAGAAGCTGGCAGGAAAACA 57.051 45.000 17.64 0.00 0.00 2.83
446 464 2.032376 TCCGCTGTGCAATGCTGA 59.968 55.556 6.82 6.45 0.00 4.26
459 477 0.729690 GCATCCTTCTTTCACTCCGC 59.270 55.000 0.00 0.00 0.00 5.54
468 486 0.970937 TCGAGGTCCGCATCCTTCTT 60.971 55.000 0.00 0.00 38.37 2.52
475 493 4.592192 CGCCATCGAGGTCCGCAT 62.592 66.667 0.00 0.00 40.61 4.73
606 624 4.790861 GAACGAGGGGGCGTCGAC 62.791 72.222 5.18 5.18 44.86 4.20
609 627 4.144703 GAGGAACGAGGGGGCGTC 62.145 72.222 0.00 0.00 44.86 5.19
667 685 2.509336 CGCGCTCAGAACCCGAAT 60.509 61.111 5.56 0.00 0.00 3.34
892 919 1.448540 CAACCGAATCGCAGCCTCT 60.449 57.895 0.00 0.00 0.00 3.69
933 960 4.529446 CTCTTATCTCCGCGAGACTTAAC 58.471 47.826 8.23 0.00 41.76 2.01
947 974 3.372025 GCCATGGTGGTTTCCTCTTATCT 60.372 47.826 14.67 0.00 40.46 1.98
971 998 2.047179 GTTCAGTCTGGGCGGACC 60.047 66.667 0.00 0.00 36.95 4.46
972 999 1.668151 GTGTTCAGTCTGGGCGGAC 60.668 63.158 0.00 0.00 36.56 4.79
973 1000 1.691195 TTGTGTTCAGTCTGGGCGGA 61.691 55.000 0.00 0.00 0.00 5.54
977 1004 3.698029 CACTTTTGTGTTCAGTCTGGG 57.302 47.619 0.00 0.00 44.94 4.45
995 1022 0.388134 CTGCAGCAGTGGCATTTCAC 60.388 55.000 14.90 0.00 44.61 3.18
996 1023 1.961378 CTGCAGCAGTGGCATTTCA 59.039 52.632 14.90 0.00 44.61 2.69
1375 1414 1.281656 CCGAGCCGTTGGTTTTGAC 59.718 57.895 0.00 0.00 0.00 3.18
1444 1491 2.450609 AGGAACAAATGCTACGACGT 57.549 45.000 5.52 5.52 0.00 4.34
1448 1495 7.715265 ATATACTGAAGGAACAAATGCTACG 57.285 36.000 0.00 0.00 0.00 3.51
1451 1498 8.624776 GCTTTATATACTGAAGGAACAAATGCT 58.375 33.333 0.00 0.00 0.00 3.79
1476 1523 4.497006 CCTGCAGAACATTGTAGCATTAGC 60.497 45.833 17.39 0.00 42.56 3.09
1482 1529 6.382869 AATATTCCTGCAGAACATTGTAGC 57.617 37.500 17.39 0.00 37.29 3.58
1517 1569 5.113383 TCTTTAGCGAGTTGACTTTTGACA 58.887 37.500 0.00 0.00 0.00 3.58
1560 1777 9.671279 TGCTAGTAACTACTGTACTACACATAA 57.329 33.333 0.00 0.00 36.29 1.90
1561 1778 9.671279 TTGCTAGTAACTACTGTACTACACATA 57.329 33.333 0.00 0.00 36.29 2.29
1562 1779 8.457261 GTTGCTAGTAACTACTGTACTACACAT 58.543 37.037 15.60 0.00 36.29 3.21
1563 1780 7.663081 AGTTGCTAGTAACTACTGTACTACACA 59.337 37.037 22.82 0.00 39.03 3.72
1564 1781 8.038492 AGTTGCTAGTAACTACTGTACTACAC 57.962 38.462 22.82 0.00 39.03 2.90
1565 1782 8.627208 AAGTTGCTAGTAACTACTGTACTACA 57.373 34.615 24.09 0.00 39.86 2.74
1566 1783 8.180920 GGAAGTTGCTAGTAACTACTGTACTAC 58.819 40.741 24.09 6.26 39.86 2.73
1567 1784 7.337942 GGGAAGTTGCTAGTAACTACTGTACTA 59.662 40.741 24.09 0.00 39.86 1.82
1568 1785 6.152492 GGGAAGTTGCTAGTAACTACTGTACT 59.848 42.308 24.09 8.82 39.86 2.73
1569 1786 6.071728 TGGGAAGTTGCTAGTAACTACTGTAC 60.072 42.308 24.09 10.98 39.86 2.90
1570 1787 6.012113 TGGGAAGTTGCTAGTAACTACTGTA 58.988 40.000 24.09 9.35 39.86 2.74
1571 1788 4.836736 TGGGAAGTTGCTAGTAACTACTGT 59.163 41.667 24.09 10.54 39.86 3.55
1572 1789 5.401531 TGGGAAGTTGCTAGTAACTACTG 57.598 43.478 24.09 0.00 39.86 2.74
1573 1790 6.622427 AATGGGAAGTTGCTAGTAACTACT 57.378 37.500 24.09 11.58 39.86 2.57
1574 1791 7.683437 AAAATGGGAAGTTGCTAGTAACTAC 57.317 36.000 24.09 19.19 39.86 2.73
1636 1853 5.163794 CCGCCAAAACGTCTTACATTTATCT 60.164 40.000 0.00 0.00 0.00 1.98
1637 1854 5.025826 CCGCCAAAACGTCTTACATTTATC 58.974 41.667 0.00 0.00 0.00 1.75
1638 1855 4.696402 TCCGCCAAAACGTCTTACATTTAT 59.304 37.500 0.00 0.00 0.00 1.40
1641 1858 2.496111 TCCGCCAAAACGTCTTACATT 58.504 42.857 0.00 0.00 0.00 2.71
1642 1859 2.172851 TCCGCCAAAACGTCTTACAT 57.827 45.000 0.00 0.00 0.00 2.29
1643 1860 2.172851 ATCCGCCAAAACGTCTTACA 57.827 45.000 0.00 0.00 0.00 2.41
1644 1861 4.666928 TTAATCCGCCAAAACGTCTTAC 57.333 40.909 0.00 0.00 0.00 2.34
1645 1862 4.333372 GGATTAATCCGCCAAAACGTCTTA 59.667 41.667 18.61 0.00 37.19 2.10
1646 1863 3.128068 GGATTAATCCGCCAAAACGTCTT 59.872 43.478 18.61 0.00 37.19 3.01
1647 1864 2.681344 GGATTAATCCGCCAAAACGTCT 59.319 45.455 18.61 0.00 37.19 4.18
1648 1865 3.060978 GGATTAATCCGCCAAAACGTC 57.939 47.619 18.61 0.00 37.19 4.34
1659 1876 4.394920 TGTTCAAGCAGTTCGGATTAATCC 59.605 41.667 22.63 22.63 43.65 3.01
1660 1877 5.545658 TGTTCAAGCAGTTCGGATTAATC 57.454 39.130 6.93 6.93 0.00 1.75
1661 1878 5.551760 CTGTTCAAGCAGTTCGGATTAAT 57.448 39.130 0.00 0.00 0.00 1.40
1676 2105 8.445275 TCTGTCTTTAAATGTAAGCTGTTCAA 57.555 30.769 0.00 0.00 0.00 2.69
1677 2106 7.173218 CCTCTGTCTTTAAATGTAAGCTGTTCA 59.827 37.037 0.00 0.00 0.00 3.18
1678 2107 7.173390 ACCTCTGTCTTTAAATGTAAGCTGTTC 59.827 37.037 0.00 0.00 0.00 3.18
1682 2111 7.908453 ACTACCTCTGTCTTTAAATGTAAGCT 58.092 34.615 0.00 0.00 0.00 3.74
1683 2112 9.085250 GTACTACCTCTGTCTTTAAATGTAAGC 57.915 37.037 0.00 0.00 0.00 3.09
1694 2123 5.715753 CCCTTGTAAGTACTACCTCTGTCTT 59.284 44.000 0.00 0.00 0.00 3.01
1695 2124 5.262804 CCCTTGTAAGTACTACCTCTGTCT 58.737 45.833 0.00 0.00 0.00 3.41
1696 2125 4.142204 GCCCTTGTAAGTACTACCTCTGTC 60.142 50.000 0.00 0.00 0.00 3.51
1698 2127 3.132467 GGCCCTTGTAAGTACTACCTCTG 59.868 52.174 0.00 0.00 0.00 3.35
1722 2174 2.513753 TCCACTAGTTGGCCACATTTG 58.486 47.619 3.88 0.00 46.47 2.32
1728 2180 3.585289 TGAAGTTATCCACTAGTTGGCCA 59.415 43.478 0.00 0.00 46.47 5.36
1747 2199 8.973378 CGCCTCACATTTTATTTACTTTTTGAA 58.027 29.630 0.00 0.00 0.00 2.69
1748 2200 7.596995 CCGCCTCACATTTTATTTACTTTTTGA 59.403 33.333 0.00 0.00 0.00 2.69
1749 2201 7.596995 TCCGCCTCACATTTTATTTACTTTTTG 59.403 33.333 0.00 0.00 0.00 2.44
1750 2202 7.662897 TCCGCCTCACATTTTATTTACTTTTT 58.337 30.769 0.00 0.00 0.00 1.94
1751 2203 7.222000 TCCGCCTCACATTTTATTTACTTTT 57.778 32.000 0.00 0.00 0.00 2.27
1752 2204 6.827586 TCCGCCTCACATTTTATTTACTTT 57.172 33.333 0.00 0.00 0.00 2.66
1753 2205 6.827586 TTCCGCCTCACATTTTATTTACTT 57.172 33.333 0.00 0.00 0.00 2.24
1805 2257 9.415544 GCATTTCTCAACAATCTTTGAAGTTAT 57.584 29.630 0.00 0.00 35.07 1.89
1806 2258 8.632679 AGCATTTCTCAACAATCTTTGAAGTTA 58.367 29.630 0.00 0.00 35.07 2.24
1807 2259 7.495055 AGCATTTCTCAACAATCTTTGAAGTT 58.505 30.769 0.00 0.00 35.07 2.66
1808 2260 7.047460 AGCATTTCTCAACAATCTTTGAAGT 57.953 32.000 0.00 0.00 35.07 3.01
1857 2309 4.798574 AGCAACCGAAAATGTGAGAATTC 58.201 39.130 0.00 0.00 0.00 2.17
1866 2318 2.073816 AGTACCGAGCAACCGAAAATG 58.926 47.619 0.00 0.00 0.00 2.32
1884 2336 1.622312 GGACGGTGTTAGAAGGGAAGT 59.378 52.381 0.00 0.00 0.00 3.01
1885 2337 1.621814 TGGACGGTGTTAGAAGGGAAG 59.378 52.381 0.00 0.00 0.00 3.46
1921 2373 8.470040 AAATCACGTGTATATGAAGTAACGTT 57.530 30.769 16.51 5.88 41.84 3.99
1940 2392 8.333186 AGTGTGTAACGAGTTTTTAGAAATCAC 58.667 33.333 0.00 0.00 42.39 3.06
1945 2397 8.931385 ACTTAGTGTGTAACGAGTTTTTAGAA 57.069 30.769 0.00 0.00 42.39 2.10
1949 2401 6.108015 TGGACTTAGTGTGTAACGAGTTTTT 58.892 36.000 0.00 0.00 42.39 1.94
1950 2402 5.663456 TGGACTTAGTGTGTAACGAGTTTT 58.337 37.500 0.00 0.00 42.39 2.43
1954 2406 4.868067 AGTTGGACTTAGTGTGTAACGAG 58.132 43.478 0.00 0.00 42.39 4.18
1957 2409 5.846203 TGGTAGTTGGACTTAGTGTGTAAC 58.154 41.667 0.00 0.00 37.35 2.50
1977 2429 0.106918 TTTTCGTCACTGGCCTTGGT 60.107 50.000 3.32 0.00 0.00 3.67
1992 2444 4.545610 TGATGCAGTTTCCGAATGTTTTC 58.454 39.130 0.00 0.00 0.00 2.29
1998 2450 3.003394 TCCATGATGCAGTTTCCGAAT 57.997 42.857 0.00 0.00 0.00 3.34
2002 3002 5.075858 TGAAATTCCATGATGCAGTTTCC 57.924 39.130 2.49 0.00 0.00 3.13
2011 3011 5.759059 TGAGGCTTACTGAAATTCCATGAT 58.241 37.500 0.00 0.00 0.00 2.45
2137 3138 0.386113 CTACTAAGGAGAGCGGGCAC 59.614 60.000 0.00 0.00 0.00 5.01
2139 3140 1.623163 ATCTACTAAGGAGAGCGGGC 58.377 55.000 0.00 0.00 0.00 6.13
2140 3141 2.750712 GCTATCTACTAAGGAGAGCGGG 59.249 54.545 0.00 0.00 38.08 6.13
2143 3144 4.156008 GCTGAGCTATCTACTAAGGAGAGC 59.844 50.000 0.00 2.65 45.09 4.09
2168 3319 7.585579 ATTTCAAAAGGTTTCCAAAATGCAT 57.414 28.000 0.00 0.00 0.00 3.96
2252 3416 6.899114 ACGTACAGGAAATTCATCAAGAAAC 58.101 36.000 0.00 0.00 40.22 2.78
2278 3442 4.122046 CCATCATTACTGCGATCTGTGAA 58.878 43.478 0.00 0.00 0.00 3.18
2406 3570 3.006537 CACGGGTCTTCTTAGTTCCAGAA 59.993 47.826 0.00 0.00 0.00 3.02
2629 3802 3.814504 ACTGGGGAGATTCAACAATGT 57.185 42.857 0.00 0.00 0.00 2.71
2668 3841 2.790433 TGAGAAGGGCACATGGTTTAC 58.210 47.619 0.00 0.00 0.00 2.01
2782 3955 7.496920 TGAATAAGAATGTCCAAGATAGTGCTG 59.503 37.037 0.00 0.00 0.00 4.41
2856 4727 1.211969 CATTGTGCCTGCTGTCAGC 59.788 57.895 18.32 18.32 42.82 4.26
2860 4731 0.885879 CATGTCATTGTGCCTGCTGT 59.114 50.000 0.00 0.00 0.00 4.40
2890 4761 2.107950 TCGGCATGGTACTTTCAAGG 57.892 50.000 0.00 0.00 0.00 3.61
2948 4819 4.327087 GGTCTTTACCCGTTAATGTACACG 59.673 45.833 0.00 0.00 40.21 4.49
2960 4831 6.259387 GTCTATAATTTGGTGGTCTTTACCCG 59.741 42.308 0.00 0.00 46.16 5.28
2977 4848 8.727149 TGGAAGGAAGATTTCATGGTCTATAAT 58.273 33.333 0.00 0.00 0.00 1.28
2978 4849 8.101309 TGGAAGGAAGATTTCATGGTCTATAA 57.899 34.615 0.00 0.00 0.00 0.98
2980 4851 6.581388 TGGAAGGAAGATTTCATGGTCTAT 57.419 37.500 0.00 0.00 0.00 1.98
2981 4852 6.387192 TTGGAAGGAAGATTTCATGGTCTA 57.613 37.500 0.00 0.00 0.00 2.59
2983 4854 5.680665 GCATTGGAAGGAAGATTTCATGGTC 60.681 44.000 0.00 0.00 0.00 4.02
2984 4855 4.161001 GCATTGGAAGGAAGATTTCATGGT 59.839 41.667 0.00 0.00 0.00 3.55
3003 5123 7.902920 AATAAGATAACAACTCCATGGCATT 57.097 32.000 6.96 0.00 0.00 3.56
3030 5150 6.993902 TGATCAACATGCTACATGTACATGAT 59.006 34.615 36.36 25.16 43.04 2.45
3031 5151 6.347696 TGATCAACATGCTACATGTACATGA 58.652 36.000 36.36 20.94 43.04 3.07
3032 5152 6.607735 TGATCAACATGCTACATGTACATG 57.392 37.500 29.97 29.97 45.28 3.21
3033 5153 7.499895 TGATTGATCAACATGCTACATGTACAT 59.500 33.333 11.07 1.41 33.08 2.29
3034 5154 6.822676 TGATTGATCAACATGCTACATGTACA 59.177 34.615 11.07 0.00 33.08 2.90
3035 5155 7.250445 TGATTGATCAACATGCTACATGTAC 57.750 36.000 11.07 0.16 33.08 2.90
3036 5156 7.862512 TTGATTGATCAACATGCTACATGTA 57.137 32.000 11.07 5.25 41.51 2.29
3037 5157 6.762702 TTGATTGATCAACATGCTACATGT 57.237 33.333 11.07 2.69 41.51 3.21
3067 5187 4.557205 GAACTAAATCGGACTGTCACTGT 58.443 43.478 10.38 0.00 0.00 3.55
3080 5200 6.248631 GCACATACCAGTTTCGAACTAAATC 58.751 40.000 0.00 0.00 40.46 2.17
3081 5201 5.123344 GGCACATACCAGTTTCGAACTAAAT 59.877 40.000 0.00 0.00 40.46 1.40
3097 5217 1.408266 CCTACCCAACCAGGCACATAC 60.408 57.143 0.00 0.00 35.39 2.39
3099 5219 1.691219 CCTACCCAACCAGGCACAT 59.309 57.895 0.00 0.00 35.39 3.21
3102 5222 2.121689 ACCCTACCCAACCAGGCA 60.122 61.111 0.00 0.00 35.39 4.75
3106 5226 0.402272 ACCTTCACCCTACCCAACCA 60.402 55.000 0.00 0.00 0.00 3.67
3107 5227 0.037734 CACCTTCACCCTACCCAACC 59.962 60.000 0.00 0.00 0.00 3.77
3108 5228 1.061546 TCACCTTCACCCTACCCAAC 58.938 55.000 0.00 0.00 0.00 3.77
3110 5230 1.061546 GTTCACCTTCACCCTACCCA 58.938 55.000 0.00 0.00 0.00 4.51
3111 5231 0.036671 CGTTCACCTTCACCCTACCC 60.037 60.000 0.00 0.00 0.00 3.69
3113 5233 0.672711 GCCGTTCACCTTCACCCTAC 60.673 60.000 0.00 0.00 0.00 3.18
3114 5234 1.122632 TGCCGTTCACCTTCACCCTA 61.123 55.000 0.00 0.00 0.00 3.53
3115 5235 1.990160 TTGCCGTTCACCTTCACCCT 61.990 55.000 0.00 0.00 0.00 4.34
3137 5257 1.870055 AAGGCATGCAGGAACAAGCG 61.870 55.000 21.36 0.00 35.16 4.68
3142 5262 3.942130 AAAACTAAGGCATGCAGGAAC 57.058 42.857 21.36 0.72 0.00 3.62
3158 5279 7.760340 CACTCCAGGTCTACAATACTCTAAAAC 59.240 40.741 0.00 0.00 0.00 2.43
3163 5284 4.264442 ACCACTCCAGGTCTACAATACTCT 60.264 45.833 0.00 0.00 37.28 3.24
3177 5298 3.493350 CGAATATCCAAGGACCACTCCAG 60.493 52.174 0.00 0.00 39.39 3.86
3199 5320 2.558554 ATACGCGTGCCTGGTCTCAC 62.559 60.000 24.59 0.00 0.00 3.51
3230 5353 4.133078 ACAAAGAAAGAGGCTGACAGAAG 58.867 43.478 6.65 0.00 0.00 2.85
3234 5357 3.391296 AGGTACAAAGAAAGAGGCTGACA 59.609 43.478 0.00 0.00 0.00 3.58
3286 5409 5.532406 ACGAACCTGTAGACACAAAGTAGTA 59.468 40.000 0.00 0.00 33.22 1.82
3287 5410 4.340381 ACGAACCTGTAGACACAAAGTAGT 59.660 41.667 0.00 0.00 33.22 2.73
3288 5411 4.868067 ACGAACCTGTAGACACAAAGTAG 58.132 43.478 0.00 0.00 33.22 2.57
3301 5424 3.383825 AGAGTACAGTTCAACGAACCTGT 59.616 43.478 3.31 9.29 42.85 4.00
3499 5622 1.162698 CTGTCGAAGTACCGAGTGGA 58.837 55.000 0.00 0.00 39.43 4.02
3520 5643 3.260205 ACCTTCTTCCCAGAATTCTCCA 58.740 45.455 4.57 0.00 38.42 3.86
3530 5653 1.344065 TGTAGCGAACCTTCTTCCCA 58.656 50.000 0.00 0.00 0.00 4.37
3578 5701 1.754803 TCCGAGCAACCGTATCTTCAT 59.245 47.619 0.00 0.00 0.00 2.57
3579 5702 1.179152 TCCGAGCAACCGTATCTTCA 58.821 50.000 0.00 0.00 0.00 3.02
3602 5730 7.216494 TGCTTGATATCATCTACAAAATCGGA 58.784 34.615 6.17 0.00 0.00 4.55
3635 5763 1.202927 TGGAGAAAGGGTTTCCTGCTG 60.203 52.381 0.00 0.00 44.07 4.41
3690 5820 2.154462 CTGCACACCTTAAGGAACTGG 58.846 52.381 28.52 13.13 40.86 4.00
3705 5835 7.644945 ACGTAAATTTAACTAAAACCACTGCAC 59.355 33.333 0.00 0.00 0.00 4.57
3733 5867 4.139786 CAGACACAATCCCTTCATATGGG 58.860 47.826 2.13 0.00 45.90 4.00
3734 5868 5.039920 TCAGACACAATCCCTTCATATGG 57.960 43.478 2.13 0.00 0.00 2.74
3735 5869 7.578310 AATTCAGACACAATCCCTTCATATG 57.422 36.000 0.00 0.00 0.00 1.78
3736 5870 7.941238 CCTAATTCAGACACAATCCCTTCATAT 59.059 37.037 0.00 0.00 0.00 1.78
3737 5871 7.282585 CCTAATTCAGACACAATCCCTTCATA 58.717 38.462 0.00 0.00 0.00 2.15
3738 5872 6.125029 CCTAATTCAGACACAATCCCTTCAT 58.875 40.000 0.00 0.00 0.00 2.57
3739 5873 5.500234 CCTAATTCAGACACAATCCCTTCA 58.500 41.667 0.00 0.00 0.00 3.02
3740 5874 4.336713 GCCTAATTCAGACACAATCCCTTC 59.663 45.833 0.00 0.00 0.00 3.46
3755 5889 2.163613 CCGAAACAGTTGGGCCTAATTC 59.836 50.000 4.25 3.78 0.00 2.17
3767 5901 2.637872 TCAAATCCTCCTCCGAAACAGT 59.362 45.455 0.00 0.00 0.00 3.55
3779 5913 5.007136 GTCACGGAATCAGATTCAAATCCTC 59.993 44.000 22.23 4.73 41.03 3.71
3795 5929 4.013728 CTGGGGATTTAAATGTCACGGAA 58.986 43.478 5.17 0.00 0.00 4.30
3800 5934 8.893563 ACTTTAATCTGGGGATTTAAATGTCA 57.106 30.769 5.17 0.55 41.75 3.58
3802 5936 8.040727 GCAACTTTAATCTGGGGATTTAAATGT 58.959 33.333 5.17 0.00 41.75 2.71
3804 5938 8.379428 AGCAACTTTAATCTGGGGATTTAAAT 57.621 30.769 0.00 0.00 41.75 1.40
3806 5940 7.453126 TGAAGCAACTTTAATCTGGGGATTTAA 59.547 33.333 0.00 0.00 41.75 1.52
3833 5971 4.503991 GGGACCAGGTATCACAATCATCTC 60.504 50.000 0.00 0.00 0.00 2.75
3843 5981 2.398754 ATCATCGGGACCAGGTATCA 57.601 50.000 0.00 0.00 0.00 2.15
3856 5994 6.917477 CCACAAACATTACCCATTTATCATCG 59.083 38.462 0.00 0.00 0.00 3.84
3866 6004 3.527507 TTAGCCCACAAACATTACCCA 57.472 42.857 0.00 0.00 0.00 4.51
3871 6009 4.116238 CAACGTTTTAGCCCACAAACATT 58.884 39.130 0.00 0.00 33.23 2.71
3888 6026 4.331968 TGATTGATAAAAGGGCTCAACGT 58.668 39.130 0.00 0.00 32.16 3.99
3897 6035 5.634859 GCAACACACCTTGATTGATAAAAGG 59.365 40.000 0.00 0.00 45.02 3.11
3898 6036 6.364165 CAGCAACACACCTTGATTGATAAAAG 59.636 38.462 0.00 0.00 0.00 2.27
3912 6050 2.034179 GGGTAGTTTTCAGCAACACACC 59.966 50.000 0.00 0.00 35.07 4.16
3920 6058 3.685272 GCTCTACTTGGGTAGTTTTCAGC 59.315 47.826 3.59 1.91 44.13 4.26
3943 6081 0.531657 GGTAGCATGCACATTGCCAA 59.468 50.000 21.98 0.00 44.23 4.52
3955 6094 9.297037 GATACCCATAAACATTTTAGGTAGCAT 57.703 33.333 0.00 0.00 0.00 3.79
3967 6106 7.451731 TCCTTCAGAAGATACCCATAAACAT 57.548 36.000 12.14 0.00 0.00 2.71
3974 6113 4.597507 AGTTGTTCCTTCAGAAGATACCCA 59.402 41.667 12.14 0.00 34.29 4.51
3975 6114 4.938226 CAGTTGTTCCTTCAGAAGATACCC 59.062 45.833 12.14 3.36 34.29 3.69
3979 6118 4.322567 GCTCAGTTGTTCCTTCAGAAGAT 58.677 43.478 12.14 0.00 34.29 2.40
3981 6120 2.478134 CGCTCAGTTGTTCCTTCAGAAG 59.522 50.000 2.78 2.78 34.29 2.85
3982 6121 2.102420 TCGCTCAGTTGTTCCTTCAGAA 59.898 45.455 0.00 0.00 0.00 3.02
3998 6137 3.240606 TTGCTTTGTGCGCTCGCTC 62.241 57.895 9.73 12.16 46.63 5.03
4002 6141 0.166814 CCTAGTTGCTTTGTGCGCTC 59.833 55.000 9.73 5.51 46.63 5.03
4010 6149 0.961753 GCCACTTGCCTAGTTGCTTT 59.038 50.000 5.27 0.00 41.18 3.51
4021 6160 1.066605 CTGCTATTGATGGCCACTTGC 59.933 52.381 8.16 7.84 40.16 4.01
4022 6161 2.372264 ACTGCTATTGATGGCCACTTG 58.628 47.619 8.16 0.00 32.80 3.16
4023 6162 2.814805 ACTGCTATTGATGGCCACTT 57.185 45.000 8.16 0.00 32.80 3.16
4024 6163 2.814805 AACTGCTATTGATGGCCACT 57.185 45.000 8.16 0.00 32.80 4.00
4025 6164 3.808728 TCTAACTGCTATTGATGGCCAC 58.191 45.455 8.16 2.36 32.80 5.01
4026 6165 4.102996 TCATCTAACTGCTATTGATGGCCA 59.897 41.667 8.56 8.56 36.24 5.36
4027 6166 4.453819 GTCATCTAACTGCTATTGATGGCC 59.546 45.833 0.00 0.00 34.75 5.36
4028 6167 4.453819 GGTCATCTAACTGCTATTGATGGC 59.546 45.833 0.00 0.00 38.55 4.40
4029 6168 4.687948 CGGTCATCTAACTGCTATTGATGG 59.312 45.833 0.00 0.00 36.24 3.51
4030 6169 4.151335 GCGGTCATCTAACTGCTATTGATG 59.849 45.833 0.70 0.00 46.04 3.07
4031 6170 4.310769 GCGGTCATCTAACTGCTATTGAT 58.689 43.478 0.70 0.00 46.04 2.57
4032 6171 3.717707 GCGGTCATCTAACTGCTATTGA 58.282 45.455 0.70 0.00 46.04 2.57
4039 6178 1.756375 GCGCTGCGGTCATCTAACTG 61.756 60.000 24.61 0.00 0.00 3.16
4040 6179 1.519455 GCGCTGCGGTCATCTAACT 60.519 57.895 24.61 0.00 0.00 2.24
4041 6180 3.006706 GCGCTGCGGTCATCTAAC 58.993 61.111 24.61 0.00 0.00 2.34
4053 6192 4.139420 CAAGCCGAAGACGCGCTG 62.139 66.667 5.73 1.02 42.01 5.18
4056 6195 3.843240 GAGCAAGCCGAAGACGCG 61.843 66.667 3.53 3.53 38.29 6.01
4057 6196 3.491652 GGAGCAAGCCGAAGACGC 61.492 66.667 0.00 0.00 38.29 5.19
4058 6197 2.048222 TGGAGCAAGCCGAAGACG 60.048 61.111 0.00 0.00 39.43 4.18
4059 6198 0.246635 TACTGGAGCAAGCCGAAGAC 59.753 55.000 0.00 0.00 0.00 3.01
4060 6199 0.246635 GTACTGGAGCAAGCCGAAGA 59.753 55.000 0.00 0.00 0.00 2.87
4061 6200 0.247736 AGTACTGGAGCAAGCCGAAG 59.752 55.000 0.00 0.00 0.00 3.79
4062 6201 0.685097 AAGTACTGGAGCAAGCCGAA 59.315 50.000 0.00 0.00 0.00 4.30
4063 6202 1.552578 TAAGTACTGGAGCAAGCCGA 58.447 50.000 0.00 0.00 0.00 5.54
4064 6203 2.604046 ATAAGTACTGGAGCAAGCCG 57.396 50.000 0.00 0.00 0.00 5.52
4065 6204 4.623002 GACTATAAGTACTGGAGCAAGCC 58.377 47.826 0.00 0.00 0.00 4.35
4066 6205 4.202030 ACGACTATAAGTACTGGAGCAAGC 60.202 45.833 0.00 0.00 0.00 4.01
4067 6206 5.502153 ACGACTATAAGTACTGGAGCAAG 57.498 43.478 0.00 0.00 0.00 4.01
4068 6207 4.034858 CGACGACTATAAGTACTGGAGCAA 59.965 45.833 0.00 0.00 0.00 3.91
4069 6208 3.558829 CGACGACTATAAGTACTGGAGCA 59.441 47.826 0.00 0.00 0.00 4.26
4070 6209 3.606615 GCGACGACTATAAGTACTGGAGC 60.607 52.174 0.00 0.00 0.00 4.70
4071 6210 3.808726 AGCGACGACTATAAGTACTGGAG 59.191 47.826 0.00 0.00 0.00 3.86
4072 6211 3.801698 AGCGACGACTATAAGTACTGGA 58.198 45.455 0.00 0.00 0.00 3.86
4073 6212 4.987285 TCTAGCGACGACTATAAGTACTGG 59.013 45.833 0.00 0.00 0.00 4.00
4074 6213 6.365518 TCATCTAGCGACGACTATAAGTACTG 59.634 42.308 0.00 0.00 0.00 2.74
4075 6214 6.453943 TCATCTAGCGACGACTATAAGTACT 58.546 40.000 0.00 0.00 0.00 2.73
4076 6215 6.702972 TCATCTAGCGACGACTATAAGTAC 57.297 41.667 0.00 0.00 0.00 2.73
4077 6216 7.902387 AATCATCTAGCGACGACTATAAGTA 57.098 36.000 0.00 0.00 0.00 2.24
4078 6217 6.804770 AATCATCTAGCGACGACTATAAGT 57.195 37.500 0.00 0.00 0.00 2.24
4079 6218 7.906010 CCTAAATCATCTAGCGACGACTATAAG 59.094 40.741 0.00 0.00 0.00 1.73
4080 6219 7.625817 GCCTAAATCATCTAGCGACGACTATAA 60.626 40.741 0.00 0.00 0.00 0.98
4081 6220 6.183360 GCCTAAATCATCTAGCGACGACTATA 60.183 42.308 0.00 0.00 0.00 1.31
4082 6221 5.392165 GCCTAAATCATCTAGCGACGACTAT 60.392 44.000 0.00 0.00 0.00 2.12
4083 6222 4.083431 GCCTAAATCATCTAGCGACGACTA 60.083 45.833 0.00 0.00 0.00 2.59
4084 6223 3.304794 GCCTAAATCATCTAGCGACGACT 60.305 47.826 0.00 0.00 0.00 4.18
4085 6224 2.981140 GCCTAAATCATCTAGCGACGAC 59.019 50.000 0.00 0.00 0.00 4.34
4086 6225 2.350484 CGCCTAAATCATCTAGCGACGA 60.350 50.000 0.00 0.00 0.00 4.20
4087 6226 1.979469 CGCCTAAATCATCTAGCGACG 59.021 52.381 0.00 0.00 0.00 5.12
4088 6227 1.721926 GCGCCTAAATCATCTAGCGAC 59.278 52.381 6.36 0.00 0.00 5.19
4089 6228 2.065993 GCGCCTAAATCATCTAGCGA 57.934 50.000 6.36 0.00 0.00 4.93
4090 6229 0.710567 CGCGCCTAAATCATCTAGCG 59.289 55.000 0.00 0.00 40.37 4.26
4091 6230 1.721926 GACGCGCCTAAATCATCTAGC 59.278 52.381 5.73 0.00 0.00 3.42
4092 6231 3.290308 AGACGCGCCTAAATCATCTAG 57.710 47.619 5.73 0.00 0.00 2.43
4093 6232 3.639538 GAAGACGCGCCTAAATCATCTA 58.360 45.455 5.73 0.00 0.00 1.98
4094 6233 2.474816 GAAGACGCGCCTAAATCATCT 58.525 47.619 5.73 0.00 0.00 2.90
4095 6234 1.190323 CGAAGACGCGCCTAAATCATC 59.810 52.381 5.73 0.00 0.00 2.92
4096 6235 1.209128 CGAAGACGCGCCTAAATCAT 58.791 50.000 5.73 0.00 0.00 2.45
4097 6236 0.804544 CCGAAGACGCGCCTAAATCA 60.805 55.000 5.73 0.00 38.29 2.57
4098 6237 0.804933 ACCGAAGACGCGCCTAAATC 60.805 55.000 5.73 0.00 38.29 2.17
4099 6238 0.390735 AACCGAAGACGCGCCTAAAT 60.391 50.000 5.73 0.00 38.29 1.40
4100 6239 0.600782 AAACCGAAGACGCGCCTAAA 60.601 50.000 5.73 0.00 38.29 1.85
4101 6240 1.005867 AAACCGAAGACGCGCCTAA 60.006 52.632 5.73 0.00 38.29 2.69
4102 6241 1.735198 CAAACCGAAGACGCGCCTA 60.735 57.895 5.73 0.00 38.29 3.93
4103 6242 3.041940 CAAACCGAAGACGCGCCT 61.042 61.111 5.73 0.00 38.29 5.52
4104 6243 4.736631 GCAAACCGAAGACGCGCC 62.737 66.667 5.73 0.00 38.29 6.53
4105 6244 3.631049 GAGCAAACCGAAGACGCGC 62.631 63.158 5.73 0.00 38.29 6.86
4106 6245 2.470286 GAGCAAACCGAAGACGCG 59.530 61.111 3.53 3.53 38.29 6.01
4107 6246 1.901650 CTGGAGCAAACCGAAGACGC 61.902 60.000 0.00 0.00 38.29 5.19
4108 6247 0.600255 ACTGGAGCAAACCGAAGACG 60.600 55.000 0.00 0.00 39.43 4.18
4109 6248 2.067013 GTACTGGAGCAAACCGAAGAC 58.933 52.381 0.00 0.00 0.00 3.01
4110 6249 1.968493 AGTACTGGAGCAAACCGAAGA 59.032 47.619 0.00 0.00 0.00 2.87
4111 6250 2.069273 CAGTACTGGAGCAAACCGAAG 58.931 52.381 15.49 0.00 0.00 3.79
4112 6251 1.414919 ACAGTACTGGAGCAAACCGAA 59.585 47.619 26.12 0.00 34.19 4.30
4113 6252 1.000506 GACAGTACTGGAGCAAACCGA 59.999 52.381 26.12 0.00 34.19 4.69
4114 6253 1.429463 GACAGTACTGGAGCAAACCG 58.571 55.000 26.12 0.00 34.19 4.44
4115 6254 1.429463 CGACAGTACTGGAGCAAACC 58.571 55.000 26.12 4.70 34.19 3.27
4116 6255 0.790814 GCGACAGTACTGGAGCAAAC 59.209 55.000 28.38 10.04 37.17 2.93
4117 6256 0.679505 AGCGACAGTACTGGAGCAAA 59.320 50.000 31.97 0.00 38.76 3.68
4118 6257 1.472878 CTAGCGACAGTACTGGAGCAA 59.527 52.381 31.97 15.06 38.76 3.91
4119 6258 1.095600 CTAGCGACAGTACTGGAGCA 58.904 55.000 31.97 21.81 38.76 4.26
4120 6259 1.380524 TCTAGCGACAGTACTGGAGC 58.619 55.000 27.01 27.01 37.36 4.70
4121 6260 2.292016 CCATCTAGCGACAGTACTGGAG 59.708 54.545 26.12 19.23 34.19 3.86
4122 6261 2.298610 CCATCTAGCGACAGTACTGGA 58.701 52.381 26.12 13.02 34.19 3.86
4123 6262 2.025155 ACCATCTAGCGACAGTACTGG 58.975 52.381 26.12 10.99 34.19 4.00
4124 6263 2.946329 AGACCATCTAGCGACAGTACTG 59.054 50.000 21.44 21.44 0.00 2.74
4125 6264 3.284793 AGACCATCTAGCGACAGTACT 57.715 47.619 0.00 0.00 0.00 2.73
4126 6265 6.798315 TTATAGACCATCTAGCGACAGTAC 57.202 41.667 0.00 0.00 31.67 2.73
4127 6266 7.883833 AGATTTATAGACCATCTAGCGACAGTA 59.116 37.037 0.00 0.00 31.67 2.74
4128 6267 6.717540 AGATTTATAGACCATCTAGCGACAGT 59.282 38.462 0.00 0.00 31.67 3.55
4129 6268 7.026562 CAGATTTATAGACCATCTAGCGACAG 58.973 42.308 0.00 0.00 31.67 3.51
4130 6269 6.715264 TCAGATTTATAGACCATCTAGCGACA 59.285 38.462 0.00 0.00 31.67 4.35
4131 6270 7.147143 TCAGATTTATAGACCATCTAGCGAC 57.853 40.000 0.00 0.00 31.67 5.19
4132 6271 7.761038 TTCAGATTTATAGACCATCTAGCGA 57.239 36.000 0.00 0.00 31.67 4.93
4133 6272 8.031864 ACATTCAGATTTATAGACCATCTAGCG 58.968 37.037 0.00 0.00 31.67 4.26
4195 6334 9.616156 GAGGGAGTACGATCTATTCATTATCTA 57.384 37.037 0.00 0.00 0.00 1.98
4196 6335 8.333235 AGAGGGAGTACGATCTATTCATTATCT 58.667 37.037 0.00 0.00 0.00 1.98
4197 6336 8.514330 AGAGGGAGTACGATCTATTCATTATC 57.486 38.462 0.00 0.00 0.00 1.75
4198 6337 8.333235 AGAGAGGGAGTACGATCTATTCATTAT 58.667 37.037 0.00 0.00 0.00 1.28
4199 6338 7.691213 AGAGAGGGAGTACGATCTATTCATTA 58.309 38.462 0.00 0.00 0.00 1.90
4200 6339 6.548321 AGAGAGGGAGTACGATCTATTCATT 58.452 40.000 0.00 0.00 0.00 2.57
4201 6340 6.012858 AGAGAGAGGGAGTACGATCTATTCAT 60.013 42.308 0.00 0.00 0.00 2.57
4202 6341 5.308497 AGAGAGAGGGAGTACGATCTATTCA 59.692 44.000 0.00 0.00 0.00 2.57
4203 6342 5.801380 AGAGAGAGGGAGTACGATCTATTC 58.199 45.833 0.00 0.00 0.00 1.75
4204 6343 5.308497 TGAGAGAGAGGGAGTACGATCTATT 59.692 44.000 0.00 0.00 0.00 1.73
4205 6344 4.841813 TGAGAGAGAGGGAGTACGATCTAT 59.158 45.833 0.00 0.00 0.00 1.98
4206 6345 4.224762 TGAGAGAGAGGGAGTACGATCTA 58.775 47.826 0.00 0.00 0.00 1.98
4207 6346 3.042682 TGAGAGAGAGGGAGTACGATCT 58.957 50.000 0.00 0.00 0.00 2.75
4208 6347 3.181458 ACTGAGAGAGAGGGAGTACGATC 60.181 52.174 0.00 0.00 0.00 3.69
4209 6348 2.775384 ACTGAGAGAGAGGGAGTACGAT 59.225 50.000 0.00 0.00 0.00 3.73
4210 6349 2.189676 ACTGAGAGAGAGGGAGTACGA 58.810 52.381 0.00 0.00 0.00 3.43
4211 6350 2.702592 ACTGAGAGAGAGGGAGTACG 57.297 55.000 0.00 0.00 0.00 3.67
4212 6351 5.124297 GTGTAAACTGAGAGAGAGGGAGTAC 59.876 48.000 0.00 0.00 0.00 2.73
4213 6352 5.254901 GTGTAAACTGAGAGAGAGGGAGTA 58.745 45.833 0.00 0.00 0.00 2.59
4214 6353 4.083565 GTGTAAACTGAGAGAGAGGGAGT 58.916 47.826 0.00 0.00 0.00 3.85
4215 6354 3.127895 CGTGTAAACTGAGAGAGAGGGAG 59.872 52.174 0.00 0.00 0.00 4.30
4216 6355 3.082548 CGTGTAAACTGAGAGAGAGGGA 58.917 50.000 0.00 0.00 0.00 4.20
4217 6356 2.164624 CCGTGTAAACTGAGAGAGAGGG 59.835 54.545 0.00 0.00 0.00 4.30
4218 6357 2.416162 GCCGTGTAAACTGAGAGAGAGG 60.416 54.545 0.00 0.00 0.00 3.69
4219 6358 2.729467 CGCCGTGTAAACTGAGAGAGAG 60.729 54.545 0.00 0.00 0.00 3.20
4220 6359 1.199327 CGCCGTGTAAACTGAGAGAGA 59.801 52.381 0.00 0.00 0.00 3.10
4221 6360 1.068472 ACGCCGTGTAAACTGAGAGAG 60.068 52.381 0.00 0.00 0.00 3.20
4222 6361 0.956633 ACGCCGTGTAAACTGAGAGA 59.043 50.000 0.00 0.00 0.00 3.10
4223 6362 1.060713 CACGCCGTGTAAACTGAGAG 58.939 55.000 9.53 0.00 0.00 3.20
4224 6363 0.942410 GCACGCCGTGTAAACTGAGA 60.942 55.000 19.57 0.00 35.75 3.27
4225 6364 1.491563 GCACGCCGTGTAAACTGAG 59.508 57.895 19.57 0.00 35.75 3.35
4226 6365 2.304401 CGCACGCCGTGTAAACTGA 61.304 57.895 19.57 0.00 35.75 3.41
4227 6366 2.170036 CGCACGCCGTGTAAACTG 59.830 61.111 19.57 0.00 35.75 3.16
4228 6367 3.708734 GCGCACGCCGTGTAAACT 61.709 61.111 19.57 0.00 39.71 2.66
4246 6385 4.916984 GTCAAATTGACGACCTAGGGGTAC 60.917 50.000 14.81 2.61 40.90 3.34
4247 6386 3.196254 GTCAAATTGACGACCTAGGGGTA 59.804 47.826 14.81 0.00 40.90 3.69
4248 6387 2.027469 GTCAAATTGACGACCTAGGGGT 60.027 50.000 14.81 10.74 42.37 4.95
4249 6388 2.629051 GTCAAATTGACGACCTAGGGG 58.371 52.381 14.81 7.16 37.67 4.79
4259 6398 7.882179 ACTTGTATTAGGTTGGTCAAATTGAC 58.118 34.615 17.16 17.16 46.23 3.18
4260 6399 7.721842 TGACTTGTATTAGGTTGGTCAAATTGA 59.278 33.333 0.00 0.00 30.81 2.57
4261 6400 7.881142 TGACTTGTATTAGGTTGGTCAAATTG 58.119 34.615 0.00 0.00 30.81 2.32
4262 6401 8.650143 ATGACTTGTATTAGGTTGGTCAAATT 57.350 30.769 0.00 0.00 36.16 1.82
4263 6402 9.920946 ATATGACTTGTATTAGGTTGGTCAAAT 57.079 29.630 0.00 0.00 36.16 2.32
4364 6503 9.646522 AGGTTGCCAATTTTATCACTCTAATAT 57.353 29.630 0.00 0.00 0.00 1.28
4366 6505 7.961326 AGGTTGCCAATTTTATCACTCTAAT 57.039 32.000 0.00 0.00 0.00 1.73
4367 6506 7.556275 CCTAGGTTGCCAATTTTATCACTCTAA 59.444 37.037 0.00 0.00 0.00 2.10
4368 6507 7.054124 CCTAGGTTGCCAATTTTATCACTCTA 58.946 38.462 0.00 0.00 0.00 2.43
4369 6508 5.888161 CCTAGGTTGCCAATTTTATCACTCT 59.112 40.000 0.00 0.00 0.00 3.24
4370 6509 5.652452 ACCTAGGTTGCCAATTTTATCACTC 59.348 40.000 9.21 0.00 0.00 3.51
4371 6510 5.580022 ACCTAGGTTGCCAATTTTATCACT 58.420 37.500 9.21 0.00 0.00 3.41
4372 6511 5.914898 ACCTAGGTTGCCAATTTTATCAC 57.085 39.130 9.21 0.00 0.00 3.06
4373 6512 7.442969 CGTATACCTAGGTTGCCAATTTTATCA 59.557 37.037 22.11 0.00 0.00 2.15
4374 6513 7.572539 GCGTATACCTAGGTTGCCAATTTTATC 60.573 40.741 22.11 0.00 0.00 1.75
4375 6514 6.206048 GCGTATACCTAGGTTGCCAATTTTAT 59.794 38.462 22.11 5.71 0.00 1.40
4376 6515 5.528320 GCGTATACCTAGGTTGCCAATTTTA 59.472 40.000 22.11 0.00 0.00 1.52
4377 6516 4.337274 GCGTATACCTAGGTTGCCAATTTT 59.663 41.667 22.11 0.00 0.00 1.82
4378 6517 3.881089 GCGTATACCTAGGTTGCCAATTT 59.119 43.478 22.11 0.00 0.00 1.82
4379 6518 3.473625 GCGTATACCTAGGTTGCCAATT 58.526 45.455 22.11 0.00 0.00 2.32
4380 6519 2.547218 CGCGTATACCTAGGTTGCCAAT 60.547 50.000 22.11 9.64 0.00 3.16
4381 6520 1.202440 CGCGTATACCTAGGTTGCCAA 60.202 52.381 22.11 0.75 0.00 4.52
4382 6521 0.386476 CGCGTATACCTAGGTTGCCA 59.614 55.000 22.11 1.21 0.00 4.92
4383 6522 0.942884 GCGCGTATACCTAGGTTGCC 60.943 60.000 22.11 7.02 0.00 4.52
4384 6523 0.249155 TGCGCGTATACCTAGGTTGC 60.249 55.000 22.11 17.41 0.00 4.17
4385 6524 1.602165 CCTGCGCGTATACCTAGGTTG 60.602 57.143 22.11 9.15 0.00 3.77
4386 6525 0.672342 CCTGCGCGTATACCTAGGTT 59.328 55.000 22.11 10.62 0.00 3.50
4387 6526 0.179009 TCCTGCGCGTATACCTAGGT 60.179 55.000 20.57 20.57 0.00 3.08
4388 6527 0.522180 CTCCTGCGCGTATACCTAGG 59.478 60.000 7.41 7.41 0.00 3.02
4389 6528 0.522180 CCTCCTGCGCGTATACCTAG 59.478 60.000 8.43 0.00 0.00 3.02
4390 6529 0.109153 TCCTCCTGCGCGTATACCTA 59.891 55.000 8.43 0.00 0.00 3.08
4391 6530 1.152819 TCCTCCTGCGCGTATACCT 60.153 57.895 8.43 0.00 0.00 3.08
4392 6531 1.286260 CTCCTCCTGCGCGTATACC 59.714 63.158 8.43 0.00 0.00 2.73
4393 6532 1.286260 CCTCCTCCTGCGCGTATAC 59.714 63.158 8.43 0.00 0.00 1.47
4394 6533 1.901948 CCCTCCTCCTGCGCGTATA 60.902 63.158 8.43 0.00 0.00 1.47
4395 6534 3.227276 CCCTCCTCCTGCGCGTAT 61.227 66.667 8.43 0.00 0.00 3.06
4396 6535 4.435970 TCCCTCCTCCTGCGCGTA 62.436 66.667 8.43 0.71 0.00 4.42
4399 6538 2.442272 TACTCCCTCCTCCTGCGC 60.442 66.667 0.00 0.00 0.00 6.09
4400 6539 1.830408 CCTACTCCCTCCTCCTGCG 60.830 68.421 0.00 0.00 0.00 5.18
4401 6540 0.325765 AACCTACTCCCTCCTCCTGC 60.326 60.000 0.00 0.00 0.00 4.85
4402 6541 2.255770 AAACCTACTCCCTCCTCCTG 57.744 55.000 0.00 0.00 0.00 3.86
4403 6542 3.181394 AGAAAAACCTACTCCCTCCTCCT 60.181 47.826 0.00 0.00 0.00 3.69
4404 6543 3.182976 AGAAAAACCTACTCCCTCCTCC 58.817 50.000 0.00 0.00 0.00 4.30
4405 6544 4.912317 AAGAAAAACCTACTCCCTCCTC 57.088 45.455 0.00 0.00 0.00 3.71
4406 6545 6.775234 TTTAAGAAAAACCTACTCCCTCCT 57.225 37.500 0.00 0.00 0.00 3.69
4407 6546 7.828508 TTTTTAAGAAAAACCTACTCCCTCC 57.171 36.000 0.00 0.00 35.57 4.30
4429 6568 5.828328 GGCCTACATCCTAACTGCTATTTTT 59.172 40.000 0.00 0.00 0.00 1.94
4430 6569 5.104109 TGGCCTACATCCTAACTGCTATTTT 60.104 40.000 3.32 0.00 0.00 1.82
4431 6570 4.412199 TGGCCTACATCCTAACTGCTATTT 59.588 41.667 3.32 0.00 0.00 1.40
4432 6571 3.973973 TGGCCTACATCCTAACTGCTATT 59.026 43.478 3.32 0.00 0.00 1.73
4433 6572 3.587498 TGGCCTACATCCTAACTGCTAT 58.413 45.455 3.32 0.00 0.00 2.97
4434 6573 3.040655 TGGCCTACATCCTAACTGCTA 57.959 47.619 3.32 0.00 0.00 3.49
4435 6574 1.879575 TGGCCTACATCCTAACTGCT 58.120 50.000 3.32 0.00 0.00 4.24
4436 6575 2.170607 TCTTGGCCTACATCCTAACTGC 59.829 50.000 3.32 0.00 0.00 4.40
4437 6576 3.181461 CCTCTTGGCCTACATCCTAACTG 60.181 52.174 3.32 0.00 0.00 3.16
4438 6577 3.041946 CCTCTTGGCCTACATCCTAACT 58.958 50.000 3.32 0.00 0.00 2.24
4439 6578 3.477210 CCTCTTGGCCTACATCCTAAC 57.523 52.381 3.32 0.00 0.00 2.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.