Multiple sequence alignment - TraesCS7D01G224200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G224200 chr7D 100.000 4362 0 0 1 4362 184866669 184862308 0.000000e+00 8056.0
1 TraesCS7D01G224200 chr7D 75.819 1526 269 79 2097 3568 188992386 188993865 0.000000e+00 682.0
2 TraesCS7D01G224200 chr7D 85.150 633 75 13 946 1572 188987335 188987954 7.960000e-177 630.0
3 TraesCS7D01G224200 chr7D 88.476 269 27 3 2148 2412 184587851 184587583 5.440000e-84 322.0
4 TraesCS7D01G224200 chr7D 88.550 131 14 1 3765 3894 167556370 167556240 1.620000e-34 158.0
5 TraesCS7D01G224200 chr7D 90.164 61 6 0 4263 4323 69949707 69949767 3.620000e-11 80.5
6 TraesCS7D01G224200 chr7B 91.124 890 45 6 785 1643 154568021 154567135 0.000000e+00 1175.0
7 TraesCS7D01G224200 chr7B 91.013 879 63 10 2905 3769 154563390 154562514 0.000000e+00 1171.0
8 TraesCS7D01G224200 chr7B 92.593 675 43 7 1860 2532 154564064 154563395 0.000000e+00 963.0
9 TraesCS7D01G224200 chr7B 86.387 573 70 7 1015 1582 154278439 154277870 1.720000e-173 619.0
10 TraesCS7D01G224200 chr7B 86.253 371 42 8 1034 1399 333406039 333406405 1.140000e-105 394.0
11 TraesCS7D01G224200 chr7B 81.289 481 65 17 2059 2524 154362631 154362161 2.480000e-97 366.0
12 TraesCS7D01G224200 chr7B 80.992 484 71 17 3069 3537 333422005 333422482 8.920000e-97 364.0
13 TraesCS7D01G224200 chr7B 85.757 337 36 9 2086 2412 154277707 154277373 3.230000e-91 346.0
14 TraesCS7D01G224200 chr7B 77.336 578 108 17 2956 3521 154361687 154361121 1.960000e-83 320.0
15 TraesCS7D01G224200 chr7B 90.952 210 14 4 1643 1850 154566757 154566551 1.190000e-70 278.0
16 TraesCS7D01G224200 chr7B 77.273 484 92 12 2956 3429 154354929 154354454 7.190000e-68 268.0
17 TraesCS7D01G224200 chr7B 87.963 216 21 4 388 598 154568534 154568319 2.600000e-62 250.0
18 TraesCS7D01G224200 chr7B 95.522 67 3 0 82 148 154568697 154568631 1.660000e-19 108.0
19 TraesCS7D01G224200 chr7A 92.337 783 44 10 2997 3769 191833955 191833179 0.000000e+00 1099.0
20 TraesCS7D01G224200 chr7A 88.306 915 70 20 1637 2524 191834941 191834037 0.000000e+00 1062.0
21 TraesCS7D01G224200 chr7A 93.305 717 33 7 935 1641 191836018 191835307 0.000000e+00 1044.0
22 TraesCS7D01G224200 chr7A 85.323 620 73 10 959 1572 195199727 195199120 3.700000e-175 625.0
23 TraesCS7D01G224200 chr7A 77.567 789 128 37 2086 2859 191697423 191696669 8.670000e-117 431.0
24 TraesCS7D01G224200 chr7A 80.194 515 80 18 3069 3568 195190059 195189552 2.480000e-97 366.0
25 TraesCS7D01G224200 chr7A 80.886 429 67 13 2152 2575 195190957 195190539 1.510000e-84 324.0
26 TraesCS7D01G224200 chr7A 90.741 216 15 4 388 598 191848040 191847825 2.570000e-72 283.0
27 TraesCS7D01G224200 chr7A 89.610 77 8 0 2905 2981 191834026 191833950 9.980000e-17 99.0
28 TraesCS7D01G224200 chr7A 89.552 67 7 0 82 148 191848203 191848137 7.770000e-13 86.1
29 TraesCS7D01G224200 chr7A 84.058 69 7 4 4260 4326 617741793 617741859 3.640000e-06 63.9
30 TraesCS7D01G224200 chr3B 88.778 499 25 7 3769 4253 242671165 242671646 2.260000e-162 582.0
31 TraesCS7D01G224200 chr3B 87.751 498 30 3 3770 4253 545889305 545888825 1.770000e-153 553.0
32 TraesCS7D01G224200 chr3B 97.778 45 1 0 4318 4362 242671665 242671709 1.300000e-10 78.7
33 TraesCS7D01G224200 chr3B 88.525 61 7 0 4263 4323 738284257 738284197 1.680000e-09 75.0
34 TraesCS7D01G224200 chr3B 93.333 45 3 0 4318 4362 545888806 545888762 2.820000e-07 67.6
35 TraesCS7D01G224200 chr3B 96.774 31 1 0 6 36 747601234 747601264 8.000000e-03 52.8
36 TraesCS7D01G224200 chr3D 87.200 500 30 10 3769 4253 202477232 202476752 4.960000e-149 538.0
37 TraesCS7D01G224200 chr3D 97.778 45 1 0 4318 4362 202476733 202476689 1.300000e-10 78.7
38 TraesCS7D01G224200 chr5D 85.294 306 29 8 3769 4058 464613152 464612847 7.090000e-78 302.0
39 TraesCS7D01G224200 chr5D 87.097 124 12 2 267 390 9387463 9387582 2.120000e-28 137.0
40 TraesCS7D01G224200 chr6A 89.655 145 11 2 3974 4114 125488343 125488199 9.640000e-42 182.0
41 TraesCS7D01G224200 chr3A 93.496 123 7 1 3769 3890 494235340 494235462 9.640000e-42 182.0
42 TraesCS7D01G224200 chr3A 89.844 128 12 1 3769 3895 618584629 618584502 3.490000e-36 163.0
43 TraesCS7D01G224200 chr3A 94.000 50 3 0 4274 4323 716793134 716793085 4.680000e-10 76.8
44 TraesCS7D01G224200 chr4A 92.063 126 10 0 3769 3894 55802914 55803039 1.250000e-40 178.0
45 TraesCS7D01G224200 chr4A 94.505 91 5 0 267 357 148043283 148043373 1.640000e-29 141.0
46 TraesCS7D01G224200 chr4A 85.124 121 10 3 4141 4254 486295308 486295189 2.760000e-22 117.0
47 TraesCS7D01G224200 chr2D 91.270 126 11 0 3769 3894 13411332 13411457 5.800000e-39 172.0
48 TraesCS7D01G224200 chr2D 92.308 104 8 0 254 357 618286196 618286093 9.770000e-32 148.0
49 TraesCS7D01G224200 chr2D 89.062 64 7 0 4262 4325 459304907 459304844 3.620000e-11 80.5
50 TraesCS7D01G224200 chr2A 86.228 167 12 5 3770 3926 53623595 53623760 2.090000e-38 171.0
51 TraesCS7D01G224200 chr4B 90.551 127 12 0 3768 3894 63125538 63125664 7.500000e-38 169.0
52 TraesCS7D01G224200 chr2B 89.683 126 13 0 3769 3894 585365775 585365900 1.260000e-35 161.0
53 TraesCS7D01G224200 chr2B 92.063 63 5 0 4263 4325 757882421 757882359 6.010000e-14 89.8
54 TraesCS7D01G224200 chr6D 94.059 101 4 2 257 357 136474590 136474688 7.560000e-33 152.0
55 TraesCS7D01G224200 chr5B 88.800 125 10 2 267 391 317302612 317302732 2.720000e-32 150.0
56 TraesCS7D01G224200 chr5B 87.903 124 9 4 267 389 124772507 124772389 1.640000e-29 141.0
57 TraesCS7D01G224200 chr5B 84.298 121 10 4 4140 4253 672205761 672205879 4.610000e-20 110.0
58 TraesCS7D01G224200 chr1B 87.500 128 11 3 262 389 541471077 541470955 4.550000e-30 143.0
59 TraesCS7D01G224200 chr1B 86.400 125 13 2 267 391 580545041 580545161 2.740000e-27 134.0
60 TraesCS7D01G224200 chr1B 94.340 53 2 1 4274 4325 545418871 545418923 3.620000e-11 80.5
61 TraesCS7D01G224200 chr6B 87.097 124 12 2 266 389 590566061 590565942 2.120000e-28 137.0
62 TraesCS7D01G224200 chr1D 90.625 64 6 0 4262 4325 415209122 415209059 7.770000e-13 86.1
63 TraesCS7D01G224200 chr1A 94.118 51 3 0 4274 4324 358772421 358772471 1.300000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G224200 chr7D 184862308 184866669 4361 True 8056.00 8056 100.000000 1 4362 1 chr7D.!!$R3 4361
1 TraesCS7D01G224200 chr7D 188992386 188993865 1479 False 682.00 682 75.819000 2097 3568 1 chr7D.!!$F3 1471
2 TraesCS7D01G224200 chr7D 188987335 188987954 619 False 630.00 630 85.150000 946 1572 1 chr7D.!!$F2 626
3 TraesCS7D01G224200 chr7B 154562514 154568697 6183 True 657.50 1175 91.527833 82 3769 6 chr7B.!!$R4 3687
4 TraesCS7D01G224200 chr7B 154277373 154278439 1066 True 482.50 619 86.072000 1015 2412 2 chr7B.!!$R2 1397
5 TraesCS7D01G224200 chr7B 154361121 154362631 1510 True 343.00 366 79.312500 2059 3521 2 chr7B.!!$R3 1462
6 TraesCS7D01G224200 chr7A 191833179 191836018 2839 True 826.00 1099 90.889500 935 3769 4 chr7A.!!$R3 2834
7 TraesCS7D01G224200 chr7A 195199120 195199727 607 True 625.00 625 85.323000 959 1572 1 chr7A.!!$R2 613
8 TraesCS7D01G224200 chr7A 191696669 191697423 754 True 431.00 431 77.567000 2086 2859 1 chr7A.!!$R1 773
9 TraesCS7D01G224200 chr7A 195189552 195190957 1405 True 345.00 366 80.540000 2152 3568 2 chr7A.!!$R5 1416
10 TraesCS7D01G224200 chr3B 242671165 242671709 544 False 330.35 582 93.278000 3769 4362 2 chr3B.!!$F2 593
11 TraesCS7D01G224200 chr3B 545888762 545889305 543 True 310.30 553 90.542000 3770 4362 2 chr3B.!!$R2 592
12 TraesCS7D01G224200 chr3D 202476689 202477232 543 True 308.35 538 92.489000 3769 4362 2 chr3D.!!$R1 593

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
131 132 0.031857 TTTGCTTAACCCGTCGACGA 59.968 50.0 37.65 16.46 43.02 4.20 F
364 371 0.035598 TGCATTTCTCCGTCCGGAAA 59.964 50.0 5.23 2.65 44.66 3.13 F
2031 5088 0.312416 TTTGATTCCCGCGTTTGGTG 59.688 50.0 4.92 0.00 0.00 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2026 5083 0.396435 AGAACAGATGCCGACACCAA 59.604 50.0 0.00 0.0 0.0 3.67 R
2034 5091 1.373570 GCCACACTAGAACAGATGCC 58.626 55.0 0.00 0.0 0.0 4.40 R
3589 6820 0.396435 TCAATTGACAGTGACCCGCT 59.604 50.0 3.38 0.0 0.0 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 1.204062 GGTGACGTGTTCATGTGCG 59.796 57.895 0.00 0.00 36.32 5.34
29 30 1.218875 GGTGACGTGTTCATGTGCGA 61.219 55.000 0.00 0.00 36.32 5.10
30 31 0.579630 GTGACGTGTTCATGTGCGAA 59.420 50.000 0.00 0.00 36.32 4.70
31 32 0.579630 TGACGTGTTCATGTGCGAAC 59.420 50.000 0.00 0.00 44.56 3.95
38 39 3.559238 GTTCATGTGCGAACAAGGATT 57.441 42.857 0.00 0.00 43.89 3.01
39 40 4.678509 GTTCATGTGCGAACAAGGATTA 57.321 40.909 0.00 0.00 43.89 1.75
40 41 4.403453 GTTCATGTGCGAACAAGGATTAC 58.597 43.478 0.00 0.00 43.89 1.89
41 42 3.006940 TCATGTGCGAACAAGGATTACC 58.993 45.455 0.00 0.00 0.00 2.85
42 43 1.434555 TGTGCGAACAAGGATTACCG 58.565 50.000 0.00 0.00 41.83 4.02
43 44 0.096454 GTGCGAACAAGGATTACCGC 59.904 55.000 0.00 0.00 41.83 5.68
44 45 1.022451 TGCGAACAAGGATTACCGCC 61.022 55.000 0.00 0.00 38.12 6.13
45 46 1.712018 GCGAACAAGGATTACCGCCC 61.712 60.000 0.00 0.00 41.83 6.13
46 47 0.391927 CGAACAAGGATTACCGCCCA 60.392 55.000 0.00 0.00 41.83 5.36
47 48 1.828979 GAACAAGGATTACCGCCCAA 58.171 50.000 0.00 0.00 41.83 4.12
48 49 2.164338 GAACAAGGATTACCGCCCAAA 58.836 47.619 0.00 0.00 41.83 3.28
49 50 1.541379 ACAAGGATTACCGCCCAAAC 58.459 50.000 0.00 0.00 41.83 2.93
50 51 1.202952 ACAAGGATTACCGCCCAAACA 60.203 47.619 0.00 0.00 41.83 2.83
51 52 1.201414 CAAGGATTACCGCCCAAACAC 59.799 52.381 0.00 0.00 41.83 3.32
52 53 0.323087 AGGATTACCGCCCAAACACC 60.323 55.000 0.00 0.00 41.83 4.16
53 54 1.650314 GGATTACCGCCCAAACACCG 61.650 60.000 0.00 0.00 0.00 4.94
54 55 0.956902 GATTACCGCCCAAACACCGT 60.957 55.000 0.00 0.00 0.00 4.83
55 56 0.324285 ATTACCGCCCAAACACCGTA 59.676 50.000 0.00 0.00 0.00 4.02
56 57 0.107456 TTACCGCCCAAACACCGTAA 59.893 50.000 0.00 0.00 0.00 3.18
57 58 0.320596 TACCGCCCAAACACCGTAAG 60.321 55.000 0.00 0.00 0.00 2.34
58 59 1.301874 CCGCCCAAACACCGTAAGA 60.302 57.895 0.00 0.00 43.02 2.10
59 60 1.296056 CCGCCCAAACACCGTAAGAG 61.296 60.000 0.00 0.00 43.02 2.85
60 61 1.296056 CGCCCAAACACCGTAAGAGG 61.296 60.000 0.00 0.00 43.02 3.69
62 63 1.816572 GCCCAAACACCGTAAGAGGTT 60.817 52.381 0.00 0.00 43.00 3.50
63 64 2.550639 GCCCAAACACCGTAAGAGGTTA 60.551 50.000 0.00 0.00 43.00 2.85
64 65 3.871074 GCCCAAACACCGTAAGAGGTTAT 60.871 47.826 0.00 0.00 43.00 1.89
65 66 4.623647 GCCCAAACACCGTAAGAGGTTATA 60.624 45.833 0.00 0.00 43.00 0.98
66 67 5.677567 CCCAAACACCGTAAGAGGTTATAT 58.322 41.667 0.00 0.00 43.00 0.86
67 68 5.756833 CCCAAACACCGTAAGAGGTTATATC 59.243 44.000 0.00 0.00 43.00 1.63
68 69 6.342906 CCAAACACCGTAAGAGGTTATATCA 58.657 40.000 0.00 0.00 43.00 2.15
69 70 6.990349 CCAAACACCGTAAGAGGTTATATCAT 59.010 38.462 0.00 0.00 43.00 2.45
70 71 7.170998 CCAAACACCGTAAGAGGTTATATCATC 59.829 40.741 0.00 0.00 43.00 2.92
71 72 6.010294 ACACCGTAAGAGGTTATATCATCG 57.990 41.667 0.00 0.00 43.00 3.84
72 73 5.533903 ACACCGTAAGAGGTTATATCATCGT 59.466 40.000 0.00 0.00 43.00 3.73
73 74 6.040166 ACACCGTAAGAGGTTATATCATCGTT 59.960 38.462 0.00 0.00 43.00 3.85
74 75 6.362551 CACCGTAAGAGGTTATATCATCGTTG 59.637 42.308 0.00 0.00 43.00 4.10
75 76 6.263842 ACCGTAAGAGGTTATATCATCGTTGA 59.736 38.462 0.00 0.00 43.00 3.18
76 77 7.039923 ACCGTAAGAGGTTATATCATCGTTGAT 60.040 37.037 13.25 13.25 43.00 2.57
77 78 7.273598 CCGTAAGAGGTTATATCATCGTTGATG 59.726 40.741 17.35 0.32 40.96 3.07
78 79 7.201359 CGTAAGAGGTTATATCATCGTTGATGC 60.201 40.741 17.35 6.47 40.96 3.91
79 80 6.101650 AGAGGTTATATCATCGTTGATGCA 57.898 37.500 17.35 0.00 42.60 3.96
80 81 5.928839 AGAGGTTATATCATCGTTGATGCAC 59.071 40.000 17.35 11.01 42.60 4.57
81 82 4.686091 AGGTTATATCATCGTTGATGCACG 59.314 41.667 17.35 0.00 42.60 5.34
126 127 3.071479 TGTCATCTTTGCTTAACCCGTC 58.929 45.455 0.00 0.00 0.00 4.79
130 131 0.437295 CTTTGCTTAACCCGTCGACG 59.563 55.000 30.33 30.33 39.44 5.12
131 132 0.031857 TTTGCTTAACCCGTCGACGA 59.968 50.000 37.65 16.46 43.02 4.20
132 133 0.387622 TTGCTTAACCCGTCGACGAG 60.388 55.000 37.65 28.55 43.02 4.18
133 134 1.236616 TGCTTAACCCGTCGACGAGA 61.237 55.000 37.65 17.08 43.02 4.04
134 135 0.109597 GCTTAACCCGTCGACGAGAA 60.110 55.000 37.65 22.42 43.02 2.87
135 136 1.666888 GCTTAACCCGTCGACGAGAAA 60.667 52.381 37.65 22.11 43.02 2.52
136 137 2.872370 CTTAACCCGTCGACGAGAAAT 58.128 47.619 37.65 20.30 43.02 2.17
137 138 3.731867 GCTTAACCCGTCGACGAGAAATA 60.732 47.826 37.65 19.34 43.02 1.40
138 139 4.414852 CTTAACCCGTCGACGAGAAATAA 58.585 43.478 37.65 23.99 43.02 1.40
139 140 2.268730 ACCCGTCGACGAGAAATAAC 57.731 50.000 37.65 0.00 43.02 1.89
140 141 1.135286 ACCCGTCGACGAGAAATAACC 60.135 52.381 37.65 0.00 43.02 2.85
141 142 1.133790 CCCGTCGACGAGAAATAACCT 59.866 52.381 37.65 0.00 43.02 3.50
142 143 2.182825 CCGTCGACGAGAAATAACCTG 58.817 52.381 37.65 13.42 43.02 4.00
143 144 2.159476 CCGTCGACGAGAAATAACCTGA 60.159 50.000 37.65 0.00 43.02 3.86
144 145 3.488721 CCGTCGACGAGAAATAACCTGAT 60.489 47.826 37.65 0.00 43.02 2.90
145 146 4.103357 CGTCGACGAGAAATAACCTGATT 58.897 43.478 33.35 0.00 43.02 2.57
146 147 4.204573 CGTCGACGAGAAATAACCTGATTC 59.795 45.833 33.35 0.00 43.02 2.52
147 148 5.341617 GTCGACGAGAAATAACCTGATTCT 58.658 41.667 0.00 0.00 36.17 2.40
148 149 5.805994 GTCGACGAGAAATAACCTGATTCTT 59.194 40.000 0.00 0.00 33.73 2.52
149 150 6.310711 GTCGACGAGAAATAACCTGATTCTTT 59.689 38.462 0.00 0.00 33.73 2.52
150 151 6.872020 TCGACGAGAAATAACCTGATTCTTTT 59.128 34.615 0.00 0.00 33.73 2.27
151 152 7.386848 TCGACGAGAAATAACCTGATTCTTTTT 59.613 33.333 0.00 0.00 33.73 1.94
194 195 5.484173 TTCTAAATCTTATTGCCACAGCG 57.516 39.130 0.00 0.00 44.31 5.18
197 198 1.439353 ATCTTATTGCCACAGCGCGG 61.439 55.000 8.83 5.83 44.31 6.46
199 200 3.910914 TTATTGCCACAGCGCGGGT 62.911 57.895 13.26 7.27 44.31 5.28
229 236 2.307309 CGCGTTCCTCGTGCTTGAA 61.307 57.895 0.00 0.00 42.93 2.69
236 243 4.524749 GTTCCTCGTGCTTGAAACTTTAC 58.475 43.478 0.00 0.00 0.00 2.01
240 247 3.450578 TCGTGCTTGAAACTTTACTCGT 58.549 40.909 0.00 0.00 0.00 4.18
245 252 3.421955 GCTTGAAACTTTACTCGTCGCTC 60.422 47.826 0.00 0.00 0.00 5.03
246 253 2.313234 TGAAACTTTACTCGTCGCTCG 58.687 47.619 0.00 0.00 41.41 5.03
247 254 1.057425 GAAACTTTACTCGTCGCTCGC 59.943 52.381 0.00 0.00 39.67 5.03
248 255 0.039798 AACTTTACTCGTCGCTCGCA 60.040 50.000 0.00 0.00 39.67 5.10
249 256 0.039798 ACTTTACTCGTCGCTCGCAA 60.040 50.000 0.00 0.00 39.67 4.85
250 257 0.362512 CTTTACTCGTCGCTCGCAAC 59.637 55.000 0.00 0.00 39.67 4.17
252 259 0.039798 TTACTCGTCGCTCGCAACTT 60.040 50.000 0.00 0.00 39.67 2.66
255 262 1.057636 CTCGTCGCTCGCAACTTAAA 58.942 50.000 0.00 0.00 39.67 1.52
256 263 0.780002 TCGTCGCTCGCAACTTAAAC 59.220 50.000 0.00 0.00 39.67 2.01
258 265 1.071107 CGTCGCTCGCAACTTAAACAA 60.071 47.619 0.00 0.00 0.00 2.83
260 267 2.712466 GTCGCTCGCAACTTAAACAAAC 59.288 45.455 0.00 0.00 0.00 2.93
261 268 2.352034 TCGCTCGCAACTTAAACAAACA 59.648 40.909 0.00 0.00 0.00 2.83
263 270 3.691498 GCTCGCAACTTAAACAAACAGT 58.309 40.909 0.00 0.00 0.00 3.55
264 271 3.482110 GCTCGCAACTTAAACAAACAGTG 59.518 43.478 0.00 0.00 0.00 3.66
266 273 3.127895 TCGCAACTTAAACAAACAGTGCT 59.872 39.130 0.00 0.00 0.00 4.40
267 274 4.333095 TCGCAACTTAAACAAACAGTGCTA 59.667 37.500 0.00 0.00 0.00 3.49
268 275 4.436523 CGCAACTTAAACAAACAGTGCTAC 59.563 41.667 0.00 0.00 0.00 3.58
269 276 5.578776 GCAACTTAAACAAACAGTGCTACT 58.421 37.500 0.00 0.00 0.00 2.57
270 277 5.681543 GCAACTTAAACAAACAGTGCTACTC 59.318 40.000 0.00 0.00 0.00 2.59
271 278 6.199393 CAACTTAAACAAACAGTGCTACTCC 58.801 40.000 0.00 0.00 0.00 3.85
272 279 4.820173 ACTTAAACAAACAGTGCTACTCCC 59.180 41.667 0.00 0.00 0.00 4.30
273 280 3.577805 AAACAAACAGTGCTACTCCCT 57.422 42.857 0.00 0.00 0.00 4.20
274 281 2.841442 ACAAACAGTGCTACTCCCTC 57.159 50.000 0.00 0.00 0.00 4.30
275 282 2.330216 ACAAACAGTGCTACTCCCTCT 58.670 47.619 0.00 0.00 0.00 3.69
276 283 2.037772 ACAAACAGTGCTACTCCCTCTG 59.962 50.000 0.00 0.00 0.00 3.35
277 284 2.016905 AACAGTGCTACTCCCTCTGT 57.983 50.000 0.00 0.00 40.40 3.41
278 285 1.551452 ACAGTGCTACTCCCTCTGTC 58.449 55.000 0.00 0.00 34.87 3.51
279 286 0.820871 CAGTGCTACTCCCTCTGTCC 59.179 60.000 0.00 0.00 0.00 4.02
280 287 0.681564 AGTGCTACTCCCTCTGTCCG 60.682 60.000 0.00 0.00 0.00 4.79
281 288 1.379977 TGCTACTCCCTCTGTCCGG 60.380 63.158 0.00 0.00 0.00 5.14
282 289 1.076923 GCTACTCCCTCTGTCCGGA 60.077 63.158 0.00 0.00 0.00 5.14
283 290 0.683504 GCTACTCCCTCTGTCCGGAA 60.684 60.000 5.23 0.00 0.00 4.30
284 291 1.848652 CTACTCCCTCTGTCCGGAAA 58.151 55.000 5.23 0.00 0.00 3.13
285 292 2.389715 CTACTCCCTCTGTCCGGAAAT 58.610 52.381 5.23 0.00 0.00 2.17
286 293 2.544844 ACTCCCTCTGTCCGGAAATA 57.455 50.000 5.23 0.00 0.00 1.40
287 294 2.108970 ACTCCCTCTGTCCGGAAATAC 58.891 52.381 5.23 0.00 0.00 1.89
288 295 2.292323 ACTCCCTCTGTCCGGAAATACT 60.292 50.000 5.23 0.00 0.00 2.12
289 296 2.766828 CTCCCTCTGTCCGGAAATACTT 59.233 50.000 5.23 0.00 0.00 2.24
290 297 2.500098 TCCCTCTGTCCGGAAATACTTG 59.500 50.000 5.23 0.00 0.00 3.16
291 298 2.236395 CCCTCTGTCCGGAAATACTTGT 59.764 50.000 5.23 0.00 0.00 3.16
292 299 3.522553 CCTCTGTCCGGAAATACTTGTC 58.477 50.000 5.23 0.00 0.00 3.18
293 300 3.179830 CTCTGTCCGGAAATACTTGTCG 58.820 50.000 5.23 0.00 0.00 4.35
294 301 2.094390 TCTGTCCGGAAATACTTGTCGG 60.094 50.000 5.23 0.00 41.80 4.79
295 302 1.894466 TGTCCGGAAATACTTGTCGGA 59.106 47.619 5.23 0.00 46.06 4.55
296 303 2.953466 TCCGGAAATACTTGTCGGAG 57.047 50.000 0.00 0.00 43.84 4.63
297 304 1.479323 TCCGGAAATACTTGTCGGAGG 59.521 52.381 0.00 0.00 43.84 4.30
298 305 1.479323 CCGGAAATACTTGTCGGAGGA 59.521 52.381 0.00 0.00 42.94 3.71
299 306 2.093869 CCGGAAATACTTGTCGGAGGAA 60.094 50.000 0.00 0.00 42.94 3.36
300 307 3.431766 CCGGAAATACTTGTCGGAGGAAT 60.432 47.826 0.00 0.00 42.94 3.01
301 308 3.555956 CGGAAATACTTGTCGGAGGAATG 59.444 47.826 0.00 0.00 0.00 2.67
302 309 3.877508 GGAAATACTTGTCGGAGGAATGG 59.122 47.826 0.00 0.00 0.00 3.16
303 310 4.383770 GGAAATACTTGTCGGAGGAATGGA 60.384 45.833 0.00 0.00 0.00 3.41
304 311 5.368989 GAAATACTTGTCGGAGGAATGGAT 58.631 41.667 0.00 0.00 0.00 3.41
305 312 2.698855 ACTTGTCGGAGGAATGGATG 57.301 50.000 0.00 0.00 0.00 3.51
306 313 1.909302 ACTTGTCGGAGGAATGGATGT 59.091 47.619 0.00 0.00 0.00 3.06
307 314 3.104512 ACTTGTCGGAGGAATGGATGTA 58.895 45.455 0.00 0.00 0.00 2.29
308 315 3.711704 ACTTGTCGGAGGAATGGATGTAT 59.288 43.478 0.00 0.00 0.00 2.29
309 316 4.202264 ACTTGTCGGAGGAATGGATGTATC 60.202 45.833 0.00 0.00 0.00 2.24
310 317 3.576861 TGTCGGAGGAATGGATGTATCT 58.423 45.455 0.00 0.00 0.00 1.98
311 318 4.736473 TGTCGGAGGAATGGATGTATCTA 58.264 43.478 0.00 0.00 0.00 1.98
312 319 4.767409 TGTCGGAGGAATGGATGTATCTAG 59.233 45.833 0.00 0.00 0.00 2.43
313 320 5.010933 GTCGGAGGAATGGATGTATCTAGA 58.989 45.833 0.00 0.00 0.00 2.43
314 321 5.010933 TCGGAGGAATGGATGTATCTAGAC 58.989 45.833 0.00 0.00 0.00 2.59
315 322 4.767409 CGGAGGAATGGATGTATCTAGACA 59.233 45.833 0.00 0.00 0.00 3.41
316 323 5.420421 CGGAGGAATGGATGTATCTAGACAT 59.580 44.000 0.00 0.00 42.82 3.06
317 324 6.603599 CGGAGGAATGGATGTATCTAGACATA 59.396 42.308 0.00 0.00 40.18 2.29
318 325 7.286546 CGGAGGAATGGATGTATCTAGACATAT 59.713 40.741 0.00 0.00 40.18 1.78
319 326 8.986991 GGAGGAATGGATGTATCTAGACATATT 58.013 37.037 0.00 0.00 40.18 1.28
338 345 9.826574 GACATATTTTAGTTGTAGGTACATCCA 57.173 33.333 0.00 0.00 39.02 3.41
347 354 7.996385 AGTTGTAGGTACATCCATTTTTATGC 58.004 34.615 0.00 0.00 39.02 3.14
348 355 7.613801 AGTTGTAGGTACATCCATTTTTATGCA 59.386 33.333 0.00 0.00 39.02 3.96
349 356 8.413229 GTTGTAGGTACATCCATTTTTATGCAT 58.587 33.333 3.79 3.79 39.02 3.96
350 357 8.532186 TGTAGGTACATCCATTTTTATGCATT 57.468 30.769 3.54 0.00 39.02 3.56
351 358 8.976353 TGTAGGTACATCCATTTTTATGCATTT 58.024 29.630 3.54 0.00 39.02 2.32
352 359 9.463443 GTAGGTACATCCATTTTTATGCATTTC 57.537 33.333 3.54 0.00 39.02 2.17
353 360 8.310122 AGGTACATCCATTTTTATGCATTTCT 57.690 30.769 3.54 0.00 39.02 2.52
354 361 8.416329 AGGTACATCCATTTTTATGCATTTCTC 58.584 33.333 3.54 0.00 39.02 2.87
355 362 7.653311 GGTACATCCATTTTTATGCATTTCTCC 59.347 37.037 3.54 0.00 35.97 3.71
356 363 6.275335 ACATCCATTTTTATGCATTTCTCCG 58.725 36.000 3.54 0.00 0.00 4.63
357 364 5.913137 TCCATTTTTATGCATTTCTCCGT 57.087 34.783 3.54 0.00 0.00 4.69
358 365 5.890334 TCCATTTTTATGCATTTCTCCGTC 58.110 37.500 3.54 0.00 0.00 4.79
359 366 5.043248 CCATTTTTATGCATTTCTCCGTCC 58.957 41.667 3.54 0.00 0.00 4.79
360 367 4.349663 TTTTTATGCATTTCTCCGTCCG 57.650 40.909 3.54 0.00 0.00 4.79
361 368 1.948104 TTATGCATTTCTCCGTCCGG 58.052 50.000 3.54 0.00 0.00 5.14
362 369 1.116308 TATGCATTTCTCCGTCCGGA 58.884 50.000 3.54 0.00 42.90 5.14
363 370 0.251916 ATGCATTTCTCCGTCCGGAA 59.748 50.000 5.23 0.00 44.66 4.30
364 371 0.035598 TGCATTTCTCCGTCCGGAAA 59.964 50.000 5.23 2.65 44.66 3.13
365 372 1.339631 TGCATTTCTCCGTCCGGAAAT 60.340 47.619 5.23 4.97 44.66 2.17
366 373 2.093394 TGCATTTCTCCGTCCGGAAATA 60.093 45.455 5.23 0.00 44.66 1.40
367 374 2.287103 GCATTTCTCCGTCCGGAAATAC 59.713 50.000 5.23 0.00 44.66 1.89
368 375 3.793559 CATTTCTCCGTCCGGAAATACT 58.206 45.455 5.23 0.00 44.66 2.12
369 376 3.967332 TTTCTCCGTCCGGAAATACTT 57.033 42.857 5.23 0.00 44.66 2.24
370 377 2.953466 TCTCCGTCCGGAAATACTTG 57.047 50.000 5.23 0.00 44.66 3.16
371 378 2.173519 TCTCCGTCCGGAAATACTTGT 58.826 47.619 5.23 0.00 44.66 3.16
372 379 2.165030 TCTCCGTCCGGAAATACTTGTC 59.835 50.000 5.23 0.00 44.66 3.18
373 380 1.135315 TCCGTCCGGAAATACTTGTCG 60.135 52.381 5.23 1.25 42.05 4.35
374 381 1.274596 CGTCCGGAAATACTTGTCGG 58.725 55.000 5.23 0.00 41.80 4.79
375 382 1.135315 CGTCCGGAAATACTTGTCGGA 60.135 52.381 5.23 0.00 46.06 4.55
376 383 2.953466 TCCGGAAATACTTGTCGGAG 57.047 50.000 0.00 0.00 43.84 4.63
377 384 1.479323 TCCGGAAATACTTGTCGGAGG 59.521 52.381 0.00 0.00 43.84 4.30
378 385 1.479323 CCGGAAATACTTGTCGGAGGA 59.521 52.381 0.00 0.00 42.94 3.71
379 386 2.093869 CCGGAAATACTTGTCGGAGGAA 60.094 50.000 0.00 0.00 42.94 3.36
380 387 3.431766 CCGGAAATACTTGTCGGAGGAAT 60.432 47.826 0.00 0.00 42.94 3.01
381 388 3.555956 CGGAAATACTTGTCGGAGGAATG 59.444 47.826 0.00 0.00 0.00 2.67
382 389 3.877508 GGAAATACTTGTCGGAGGAATGG 59.122 47.826 0.00 0.00 0.00 3.16
383 390 4.383770 GGAAATACTTGTCGGAGGAATGGA 60.384 45.833 0.00 0.00 0.00 3.41
384 391 4.408182 AATACTTGTCGGAGGAATGGAG 57.592 45.455 0.00 0.00 0.00 3.86
385 392 1.645710 ACTTGTCGGAGGAATGGAGT 58.354 50.000 0.00 0.00 0.00 3.85
386 393 2.816411 ACTTGTCGGAGGAATGGAGTA 58.184 47.619 0.00 0.00 0.00 2.59
391 398 3.698040 TGTCGGAGGAATGGAGTACTAAC 59.302 47.826 0.00 0.00 0.00 2.34
393 400 3.028850 CGGAGGAATGGAGTACTAACCA 58.971 50.000 5.81 5.81 40.57 3.67
401 408 5.818678 ATGGAGTACTAACCAACAACTGA 57.181 39.130 7.35 0.00 39.69 3.41
406 413 6.313164 GGAGTACTAACCAACAACTGATAAGC 59.687 42.308 0.00 0.00 0.00 3.09
410 417 7.145932 ACTAACCAACAACTGATAAGCAATC 57.854 36.000 0.00 0.00 34.93 2.67
424 431 1.224592 CAATCCCCCACCTTCTCCG 59.775 63.158 0.00 0.00 0.00 4.63
455 462 2.224549 TGCTTAAACAACGAATCCCACG 59.775 45.455 0.00 0.00 0.00 4.94
457 464 2.835580 TAAACAACGAATCCCACGGA 57.164 45.000 0.00 0.00 35.55 4.69
467 474 0.394352 ATCCCACGGACCATGCTTTC 60.394 55.000 0.00 0.00 32.98 2.62
468 475 1.303236 CCCACGGACCATGCTTTCA 60.303 57.895 0.00 0.00 0.00 2.69
469 476 1.308069 CCCACGGACCATGCTTTCAG 61.308 60.000 0.00 0.00 0.00 3.02
470 477 0.606401 CCACGGACCATGCTTTCAGT 60.606 55.000 0.00 0.00 0.00 3.41
477 485 4.142816 CGGACCATGCTTTCAGTTTCTTAG 60.143 45.833 0.00 0.00 0.00 2.18
542 550 1.595466 CGTATACTGTCTCCGGAGCT 58.405 55.000 27.39 10.92 0.00 4.09
543 551 1.532007 CGTATACTGTCTCCGGAGCTC 59.468 57.143 27.39 20.79 0.00 4.09
544 552 2.807472 CGTATACTGTCTCCGGAGCTCT 60.807 54.545 27.39 10.91 0.00 4.09
547 555 3.408501 CTGTCTCCGGAGCTCTGCG 62.409 68.421 27.39 11.15 44.17 5.18
548 556 4.863925 GTCTCCGGAGCTCTGCGC 62.864 72.222 27.39 0.00 43.20 6.09
557 565 3.343972 GCTCTGCGCTTTGAACCA 58.656 55.556 9.73 0.00 35.14 3.67
561 573 0.884704 TCTGCGCTTTGAACCAGTCC 60.885 55.000 9.73 0.00 0.00 3.85
573 585 1.602888 CCAGTCCTGCTTGCTTGCT 60.603 57.895 3.47 0.00 0.00 3.91
574 586 0.321919 CCAGTCCTGCTTGCTTGCTA 60.322 55.000 3.47 0.00 0.00 3.49
598 610 0.677731 CTTGGCCGGCATCTCTTTGA 60.678 55.000 30.85 1.28 0.00 2.69
600 612 0.960364 TGGCCGGCATCTCTTTGAAC 60.960 55.000 30.85 6.35 0.00 3.18
602 614 0.960364 GCCGGCATCTCTTTGAACCA 60.960 55.000 24.80 0.00 0.00 3.67
603 615 0.804989 CCGGCATCTCTTTGAACCAC 59.195 55.000 0.00 0.00 0.00 4.16
605 617 2.354704 CCGGCATCTCTTTGAACCACTA 60.355 50.000 0.00 0.00 0.00 2.74
608 620 4.265073 GGCATCTCTTTGAACCACTATGT 58.735 43.478 0.00 0.00 0.00 2.29
610 622 5.294552 GGCATCTCTTTGAACCACTATGTAC 59.705 44.000 0.00 0.00 0.00 2.90
611 623 5.005779 GCATCTCTTTGAACCACTATGTACG 59.994 44.000 0.00 0.00 0.00 3.67
612 624 5.717078 TCTCTTTGAACCACTATGTACGT 57.283 39.130 0.00 0.00 0.00 3.57
614 626 5.010314 TCTCTTTGAACCACTATGTACGTGT 59.990 40.000 0.00 0.00 0.00 4.49
615 627 5.603596 TCTTTGAACCACTATGTACGTGTT 58.396 37.500 0.00 0.00 0.00 3.32
617 629 6.539464 TCTTTGAACCACTATGTACGTGTTTT 59.461 34.615 0.00 0.00 0.00 2.43
618 630 6.680874 TTGAACCACTATGTACGTGTTTTT 57.319 33.333 0.00 0.00 0.00 1.94
652 764 8.865420 TGTTACAGTACATCTCTAGTCTTTCT 57.135 34.615 0.00 0.00 0.00 2.52
653 765 9.298250 TGTTACAGTACATCTCTAGTCTTTCTT 57.702 33.333 0.00 0.00 0.00 2.52
657 769 8.861086 ACAGTACATCTCTAGTCTTTCTTTTGA 58.139 33.333 0.00 0.00 0.00 2.69
658 770 9.352784 CAGTACATCTCTAGTCTTTCTTTTGAG 57.647 37.037 0.00 0.00 0.00 3.02
679 791 9.677567 TTTGAGTTTTGATTATGTTTAGTCTGC 57.322 29.630 0.00 0.00 0.00 4.26
680 792 8.621532 TGAGTTTTGATTATGTTTAGTCTGCT 57.378 30.769 0.00 0.00 0.00 4.24
681 793 8.721478 TGAGTTTTGATTATGTTTAGTCTGCTC 58.279 33.333 0.00 0.00 0.00 4.26
682 794 8.854614 AGTTTTGATTATGTTTAGTCTGCTCT 57.145 30.769 0.00 0.00 0.00 4.09
683 795 9.289782 AGTTTTGATTATGTTTAGTCTGCTCTT 57.710 29.630 0.00 0.00 0.00 2.85
691 803 9.982651 TTATGTTTAGTCTGCTCTTATCATACC 57.017 33.333 0.00 0.00 0.00 2.73
692 804 6.817184 TGTTTAGTCTGCTCTTATCATACCC 58.183 40.000 0.00 0.00 0.00 3.69
693 805 6.382859 TGTTTAGTCTGCTCTTATCATACCCA 59.617 38.462 0.00 0.00 0.00 4.51
694 806 7.093068 TGTTTAGTCTGCTCTTATCATACCCAA 60.093 37.037 0.00 0.00 0.00 4.12
696 808 4.061596 GTCTGCTCTTATCATACCCAAGC 58.938 47.826 0.00 0.00 0.00 4.01
698 810 4.039730 TCTGCTCTTATCATACCCAAGCTC 59.960 45.833 0.00 0.00 0.00 4.09
702 814 5.011125 GCTCTTATCATACCCAAGCTCTACA 59.989 44.000 0.00 0.00 0.00 2.74
703 815 6.295575 GCTCTTATCATACCCAAGCTCTACAT 60.296 42.308 0.00 0.00 0.00 2.29
704 816 6.997655 TCTTATCATACCCAAGCTCTACATG 58.002 40.000 0.00 0.00 0.00 3.21
705 817 6.782494 TCTTATCATACCCAAGCTCTACATGA 59.218 38.462 0.00 0.00 0.00 3.07
707 819 5.282055 TCATACCCAAGCTCTACATGAAG 57.718 43.478 0.00 0.00 0.00 3.02
708 820 4.101585 TCATACCCAAGCTCTACATGAAGG 59.898 45.833 0.00 0.00 0.00 3.46
709 821 2.551270 ACCCAAGCTCTACATGAAGGA 58.449 47.619 0.00 0.00 0.00 3.36
710 822 2.912956 ACCCAAGCTCTACATGAAGGAA 59.087 45.455 0.00 0.00 0.00 3.36
713 825 4.766891 CCCAAGCTCTACATGAAGGAAAAA 59.233 41.667 0.00 0.00 0.00 1.94
746 885 1.201965 GCTTCACAGCTGTAATGACGC 60.202 52.381 21.20 17.63 43.51 5.19
751 890 1.548719 ACAGCTGTAATGACGCCAGTA 59.451 47.619 20.16 0.00 0.00 2.74
761 900 4.965119 ATGACGCCAGTAAAGAATTTCC 57.035 40.909 0.00 0.00 40.09 3.13
764 903 5.175859 TGACGCCAGTAAAGAATTTCCTAG 58.824 41.667 0.00 0.00 40.09 3.02
765 904 5.161943 ACGCCAGTAAAGAATTTCCTAGT 57.838 39.130 0.00 0.00 40.09 2.57
766 905 6.071221 TGACGCCAGTAAAGAATTTCCTAGTA 60.071 38.462 0.00 0.00 40.09 1.82
767 906 6.104665 ACGCCAGTAAAGAATTTCCTAGTAC 58.895 40.000 0.00 0.00 40.09 2.73
768 907 6.070938 ACGCCAGTAAAGAATTTCCTAGTACT 60.071 38.462 0.00 0.00 40.09 2.73
769 908 7.123247 ACGCCAGTAAAGAATTTCCTAGTACTA 59.877 37.037 1.89 1.89 40.09 1.82
797 936 6.157211 AGTAGTACTACAATGCAGAACACAC 58.843 40.000 29.87 4.69 38.48 3.82
804 943 0.467844 ATGCAGAACACACCTGGCAA 60.468 50.000 0.00 0.00 32.51 4.52
812 951 2.944129 ACACACCTGGCAAAGTATTGT 58.056 42.857 0.00 0.00 38.85 2.71
814 953 2.095768 CACACCTGGCAAAGTATTGTCG 60.096 50.000 0.00 0.00 44.24 4.35
819 958 3.370978 CCTGGCAAAGTATTGTCGTACTG 59.629 47.826 0.00 0.00 44.24 2.74
824 963 5.293569 GGCAAAGTATTGTCGTACTGCTAAT 59.706 40.000 0.00 0.00 38.85 1.73
825 964 6.477688 GGCAAAGTATTGTCGTACTGCTAATA 59.522 38.462 0.00 0.00 38.85 0.98
826 965 7.335491 GCAAAGTATTGTCGTACTGCTAATAC 58.665 38.462 0.00 0.00 38.85 1.89
852 991 7.238486 ACATGTGCAAAGGATTACCAAAATA 57.762 32.000 0.00 0.00 38.94 1.40
859 998 6.677187 GCAAAGGATTACCAAAATACTCGGAC 60.677 42.308 0.00 0.00 38.94 4.79
877 1016 0.602905 ACCGACAGCCAAACTACAGC 60.603 55.000 0.00 0.00 0.00 4.40
885 1024 0.506932 CCAAACTACAGCACGTCGTG 59.493 55.000 21.02 21.02 36.51 4.35
974 1138 0.463116 CGGGCCTTAATAGTGCGGTT 60.463 55.000 0.84 0.00 0.00 4.44
1589 1763 1.202533 GGTGCGTAGATGCCATGTAGT 60.203 52.381 0.00 0.00 0.00 2.73
1590 1764 2.128035 GTGCGTAGATGCCATGTAGTC 58.872 52.381 0.00 0.00 0.00 2.59
1640 1820 5.330455 TGGCAACTGTGAACAAACATTTA 57.670 34.783 0.00 0.00 37.61 1.40
1693 2260 8.156820 TCCATATAGGATTCAATTCGACATGTT 58.843 33.333 0.00 0.00 43.07 2.71
1735 2302 8.367660 TCTTACATTTCTCTGTTCCTCTGTAT 57.632 34.615 0.00 0.00 0.00 2.29
1777 2354 7.861629 TGATGATCCTCTGTAAGGTTGTTTAT 58.138 34.615 0.00 0.00 46.32 1.40
1794 2371 8.219105 GGTTGTTTATAACGTAGAGTCAAACAG 58.781 37.037 0.00 0.00 38.71 3.16
1862 4918 2.035832 ACAGGCCACTAACAAATGTTGC 59.964 45.455 5.01 3.77 38.90 4.17
1896 4952 0.958822 AGTTTGGTTCCAATCACCGC 59.041 50.000 13.05 0.00 37.07 5.68
1996 5053 2.166459 TGATGCTCCTCTAGTTTCGTGG 59.834 50.000 0.00 0.00 0.00 4.94
2017 5074 4.892934 TGGCCAAGTAAAGAACTGTTTGAT 59.107 37.500 0.61 0.00 38.88 2.57
2018 5075 5.362430 TGGCCAAGTAAAGAACTGTTTGATT 59.638 36.000 0.61 0.00 38.88 2.57
2022 5079 5.941948 AGTAAAGAACTGTTTGATTCCCG 57.058 39.130 0.00 0.00 36.93 5.14
2026 5083 1.265905 GAACTGTTTGATTCCCGCGTT 59.734 47.619 4.92 0.00 0.00 4.84
2031 5088 0.312416 TTTGATTCCCGCGTTTGGTG 59.688 50.000 4.92 0.00 0.00 4.17
2034 5091 2.235536 GATTCCCGCGTTTGGTGTCG 62.236 60.000 4.92 0.00 0.00 4.35
2042 5099 1.227999 CGTTTGGTGTCGGCATCTGT 61.228 55.000 0.21 0.00 0.00 3.41
2094 5151 9.950680 AGCCAATTACTTTTCAATTCATATACG 57.049 29.630 0.00 0.00 0.00 3.06
2143 5201 0.603707 CAACATGACGGAGCTGGTGT 60.604 55.000 0.00 0.00 0.00 4.16
2144 5202 0.603707 AACATGACGGAGCTGGTGTG 60.604 55.000 0.00 0.00 0.00 3.82
2145 5203 2.046892 ATGACGGAGCTGGTGTGC 60.047 61.111 0.00 0.00 0.00 4.57
2224 5287 7.477494 TGGTGCTAAGAAAGTTTTTCACTTAC 58.523 34.615 4.56 0.00 45.77 2.34
2330 5393 1.404391 AGGACATCAAGTACTACGCGG 59.596 52.381 12.47 0.00 40.58 6.46
2472 5542 9.104965 GAGTGTGCATTAACTATTACCATAACA 57.895 33.333 0.00 0.00 0.00 2.41
2584 5655 4.836125 TGAGACAAAGAGACCAAATTGC 57.164 40.909 0.00 0.00 0.00 3.56
2589 5660 6.585416 AGACAAAGAGACCAAATTGCAATTT 58.415 32.000 27.73 27.73 39.07 1.82
2595 5666 7.951530 AGAGACCAAATTGCAATTTTAAGTG 57.048 32.000 30.13 20.58 36.52 3.16
2600 5671 8.546597 ACCAAATTGCAATTTTAAGTGGATAC 57.453 30.769 32.12 0.00 36.52 2.24
2670 5747 8.361139 ACGTACATACAATTCCAAATTCCAAAA 58.639 29.630 0.00 0.00 0.00 2.44
2771 5857 8.599624 ACTCCATTTGGAATGAACTAAATGAT 57.400 30.769 15.31 2.85 45.12 2.45
2779 5865 9.912634 TTGGAATGAACTAAATGATTGAGAAAC 57.087 29.630 0.00 0.00 0.00 2.78
2781 5867 8.450964 GGAATGAACTAAATGATTGAGAAACGA 58.549 33.333 0.00 0.00 0.00 3.85
2795 5881 8.675705 ATTGAGAAACGATTTTCCCAAATTTT 57.324 26.923 0.72 0.00 41.26 1.82
2798 5884 9.418045 TGAGAAACGATTTTCCCAAATTTTATC 57.582 29.630 0.00 0.00 42.00 1.75
2799 5885 9.418045 GAGAAACGATTTTCCCAAATTTTATCA 57.582 29.630 0.00 0.00 42.00 2.15
2812 5898 8.773645 CCCAAATTTTATCAAGTTCCAAGAAAC 58.226 33.333 0.00 0.00 0.00 2.78
2829 5915 7.387397 TCCAAGAAACAATTACCATGATTTTGC 59.613 33.333 0.00 0.00 0.00 3.68
2846 5936 5.710513 TTTTGCTATGTCTCACAAGCAAT 57.289 34.783 18.43 0.00 43.94 3.56
2847 5937 4.690184 TTGCTATGTCTCACAAGCAATG 57.310 40.909 15.88 0.00 41.98 2.82
2849 5939 4.074259 TGCTATGTCTCACAAGCAATGTT 58.926 39.130 9.58 0.00 41.46 2.71
2879 5970 6.978080 TGCTAAAAGTGGAGCAAAAACTAAAG 59.022 34.615 0.00 0.00 45.47 1.85
2888 5979 9.447040 GTGGAGCAAAAACTAAAGTTTACTTAG 57.553 33.333 8.45 0.00 46.47 2.18
2919 6017 9.921637 AATATTGTCATTTTACGTGTCCAAAAT 57.078 25.926 0.00 0.00 35.30 1.82
2931 6029 6.044046 ACGTGTCCAAAATTTTAGTTTTCCC 58.956 36.000 2.44 0.00 0.00 3.97
2932 6030 6.043411 CGTGTCCAAAATTTTAGTTTTCCCA 58.957 36.000 2.44 0.00 0.00 4.37
2939 6037 8.495148 CCAAAATTTTAGTTTTCCCATTCTTCG 58.505 33.333 2.44 0.00 0.00 3.79
2994 6190 5.798132 ACAATGTATATCATCGCACTCCAT 58.202 37.500 0.00 0.00 35.48 3.41
2996 6192 6.712095 ACAATGTATATCATCGCACTCCATTT 59.288 34.615 0.00 0.00 35.48 2.32
2998 6194 5.610398 TGTATATCATCGCACTCCATTTGT 58.390 37.500 0.00 0.00 0.00 2.83
3064 6273 3.840666 AGAGAAGGATTGCTAGGACAACA 59.159 43.478 0.00 0.00 31.03 3.33
3232 6452 6.695245 CGCACATGATTTTATAAACAAAGGC 58.305 36.000 0.00 0.00 0.00 4.35
3374 6594 8.043710 AGAAATTCGACTGAAATGAGGAGTAAT 58.956 33.333 0.00 0.00 37.71 1.89
3379 6599 5.292101 CGACTGAAATGAGGAGTAATGAACC 59.708 44.000 0.00 0.00 0.00 3.62
3434 6654 7.765819 GCTTGATGGAAAATTTGTATTAAGCCT 59.234 33.333 18.32 0.00 35.55 4.58
3524 6751 8.081633 TCTTTGTTTATTTTGCATGTCTAGTGG 58.918 33.333 0.00 0.00 0.00 4.00
3542 6770 1.271163 TGGCACTACCCTGCTTTGTAC 60.271 52.381 0.00 0.00 37.33 2.90
3543 6771 1.003233 GGCACTACCCTGCTTTGTACT 59.997 52.381 0.00 0.00 37.33 2.73
3544 6772 2.235402 GGCACTACCCTGCTTTGTACTA 59.765 50.000 0.00 0.00 37.33 1.82
3593 6824 9.834628 TCTTAACTAAAATAAAAATGACAGCGG 57.165 29.630 0.00 0.00 0.00 5.52
3604 6835 3.226242 ACAGCGGGTCACTGTCAA 58.774 55.556 0.00 0.00 45.06 3.18
3605 6836 1.754745 ACAGCGGGTCACTGTCAAT 59.245 52.632 0.00 0.00 45.06 2.57
3606 6837 0.108585 ACAGCGGGTCACTGTCAATT 59.891 50.000 0.00 0.00 45.06 2.32
3609 6840 0.517316 GCGGGTCACTGTCAATTGAC 59.483 55.000 28.10 28.10 44.97 3.18
3653 6884 6.072728 TGCCACTAGTGTCATTATGTTTTCAC 60.073 38.462 21.18 0.00 0.00 3.18
3778 7011 5.835280 TCCAAGCTTTTTGGAGAGAGAATTT 59.165 36.000 1.25 0.00 43.17 1.82
3796 7029 9.100197 AGAGAATTTCTTATTTGGCCCTTTTTA 57.900 29.630 0.00 0.00 29.61 1.52
3822 7055 0.033208 TGCTTCCCTATTTGGCCCAG 60.033 55.000 0.00 0.00 0.00 4.45
3829 7062 5.417170 TCCCTATTTGGCCCAGAATAAAT 57.583 39.130 0.00 0.42 0.00 1.40
3935 7179 5.776358 AGACCATTTTGCCCCTATGATTAA 58.224 37.500 0.00 0.00 0.00 1.40
4008 7252 9.685276 ACATCCTTCTGAATTTGATTACATGTA 57.315 29.630 0.08 0.08 0.00 2.29
4080 7327 5.080969 TCCAATAAAACACGGTCTCCTAG 57.919 43.478 0.00 0.00 0.00 3.02
4134 7381 8.631480 TGTATATGTTCACTCCTCGTATATGT 57.369 34.615 0.00 0.00 0.00 2.29
4135 7382 9.074576 TGTATATGTTCACTCCTCGTATATGTT 57.925 33.333 0.00 0.00 0.00 2.71
4253 7501 4.816925 TCTCGAGTTGTGACATCGATCTAT 59.183 41.667 13.13 0.00 43.78 1.98
4254 7502 4.848757 TCGAGTTGTGACATCGATCTATG 58.151 43.478 7.15 5.71 40.29 2.23
4255 7503 4.335594 TCGAGTTGTGACATCGATCTATGT 59.664 41.667 12.35 12.35 42.75 2.29
4256 7504 5.526111 TCGAGTTGTGACATCGATCTATGTA 59.474 40.000 12.47 0.00 40.17 2.29
4258 7506 5.833082 AGTTGTGACATCGATCTATGTACC 58.167 41.667 12.47 7.19 40.17 3.34
4259 7507 5.594725 AGTTGTGACATCGATCTATGTACCT 59.405 40.000 12.47 2.88 40.17 3.08
4260 7508 6.771267 AGTTGTGACATCGATCTATGTACCTA 59.229 38.462 12.47 1.89 40.17 3.08
4261 7509 6.803154 TGTGACATCGATCTATGTACCTAG 57.197 41.667 12.47 0.00 40.17 3.02
4262 7510 6.296803 TGTGACATCGATCTATGTACCTAGT 58.703 40.000 12.47 0.00 40.17 2.57
4266 7514 7.818446 TGACATCGATCTATGTACCTAGTACTC 59.182 40.741 12.47 0.00 40.17 2.59
4268 7516 8.036575 ACATCGATCTATGTACCTAGTACTCTC 58.963 40.741 10.94 0.00 38.31 3.20
4269 7517 7.779754 TCGATCTATGTACCTAGTACTCTCT 57.220 40.000 0.00 0.00 39.49 3.10
4270 7518 8.192743 TCGATCTATGTACCTAGTACTCTCTT 57.807 38.462 0.00 0.00 39.49 2.85
4271 7519 8.306038 TCGATCTATGTACCTAGTACTCTCTTC 58.694 40.741 0.00 0.00 39.49 2.87
4272 7520 8.089597 CGATCTATGTACCTAGTACTCTCTTCA 58.910 40.741 0.00 0.00 39.49 3.02
4273 7521 9.953565 GATCTATGTACCTAGTACTCTCTTCAT 57.046 37.037 0.00 3.55 39.49 2.57
4277 7525 8.824756 ATGTACCTAGTACTCTCTTCATTTCA 57.175 34.615 0.00 0.00 39.49 2.69
4278 7526 8.645814 TGTACCTAGTACTCTCTTCATTTCAA 57.354 34.615 0.00 0.00 39.49 2.69
4279 7527 9.085645 TGTACCTAGTACTCTCTTCATTTCAAA 57.914 33.333 0.00 0.00 39.49 2.69
4280 7528 9.924650 GTACCTAGTACTCTCTTCATTTCAAAA 57.075 33.333 0.00 0.00 36.25 2.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 1.204062 GCACATGAACACGTCACCG 59.796 57.895 0.00 0.00 39.72 4.94
10 11 1.204062 CGCACATGAACACGTCACC 59.796 57.895 0.00 0.00 39.72 4.02
11 12 0.579630 TTCGCACATGAACACGTCAC 59.420 50.000 0.00 0.00 39.72 3.67
12 13 0.579630 GTTCGCACATGAACACGTCA 59.420 50.000 0.00 0.00 45.92 4.35
13 14 3.345087 GTTCGCACATGAACACGTC 57.655 52.632 0.00 0.00 45.92 4.34
18 19 3.559238 AATCCTTGTTCGCACATGAAC 57.441 42.857 0.00 0.00 46.63 3.18
19 20 3.438781 GGTAATCCTTGTTCGCACATGAA 59.561 43.478 0.00 0.00 31.06 2.57
20 21 3.006940 GGTAATCCTTGTTCGCACATGA 58.993 45.455 0.00 0.00 31.06 3.07
21 22 2.223021 CGGTAATCCTTGTTCGCACATG 60.223 50.000 0.00 0.00 31.06 3.21
22 23 2.006888 CGGTAATCCTTGTTCGCACAT 58.993 47.619 0.00 0.00 31.06 3.21
23 24 1.434555 CGGTAATCCTTGTTCGCACA 58.565 50.000 0.00 0.00 0.00 4.57
24 25 0.096454 GCGGTAATCCTTGTTCGCAC 59.904 55.000 0.00 0.00 42.27 5.34
25 26 1.022451 GGCGGTAATCCTTGTTCGCA 61.022 55.000 7.76 0.00 44.14 5.10
26 27 1.712018 GGGCGGTAATCCTTGTTCGC 61.712 60.000 0.00 0.00 42.02 4.70
27 28 0.391927 TGGGCGGTAATCCTTGTTCG 60.392 55.000 0.00 0.00 0.00 3.95
28 29 1.828979 TTGGGCGGTAATCCTTGTTC 58.171 50.000 0.00 0.00 0.00 3.18
29 30 1.890489 GTTTGGGCGGTAATCCTTGTT 59.110 47.619 0.00 0.00 0.00 2.83
30 31 1.202952 TGTTTGGGCGGTAATCCTTGT 60.203 47.619 0.00 0.00 0.00 3.16
31 32 1.201414 GTGTTTGGGCGGTAATCCTTG 59.799 52.381 0.00 0.00 0.00 3.61
32 33 1.541379 GTGTTTGGGCGGTAATCCTT 58.459 50.000 0.00 0.00 0.00 3.36
33 34 0.323087 GGTGTTTGGGCGGTAATCCT 60.323 55.000 0.00 0.00 0.00 3.24
34 35 1.650314 CGGTGTTTGGGCGGTAATCC 61.650 60.000 0.00 0.00 0.00 3.01
35 36 0.956902 ACGGTGTTTGGGCGGTAATC 60.957 55.000 0.00 0.00 0.00 1.75
36 37 0.324285 TACGGTGTTTGGGCGGTAAT 59.676 50.000 0.00 0.00 0.00 1.89
37 38 0.107456 TTACGGTGTTTGGGCGGTAA 59.893 50.000 0.00 0.00 0.00 2.85
38 39 0.320596 CTTACGGTGTTTGGGCGGTA 60.321 55.000 0.00 0.00 0.00 4.02
39 40 1.598685 CTTACGGTGTTTGGGCGGT 60.599 57.895 0.00 0.00 0.00 5.68
40 41 1.296056 CTCTTACGGTGTTTGGGCGG 61.296 60.000 0.00 0.00 0.00 6.13
41 42 1.296056 CCTCTTACGGTGTTTGGGCG 61.296 60.000 0.00 0.00 0.00 6.13
42 43 0.250597 ACCTCTTACGGTGTTTGGGC 60.251 55.000 0.00 0.00 35.52 5.36
43 44 2.265589 AACCTCTTACGGTGTTTGGG 57.734 50.000 0.00 0.00 37.36 4.12
44 45 6.342906 TGATATAACCTCTTACGGTGTTTGG 58.657 40.000 0.00 0.00 37.36 3.28
45 46 7.096189 CGATGATATAACCTCTTACGGTGTTTG 60.096 40.741 0.00 0.00 37.36 2.93
46 47 6.921857 CGATGATATAACCTCTTACGGTGTTT 59.078 38.462 0.00 0.00 37.36 2.83
47 48 6.040166 ACGATGATATAACCTCTTACGGTGTT 59.960 38.462 0.00 0.00 37.36 3.32
48 49 5.533903 ACGATGATATAACCTCTTACGGTGT 59.466 40.000 0.00 0.00 37.36 4.16
49 50 6.010294 ACGATGATATAACCTCTTACGGTG 57.990 41.667 0.00 0.00 37.36 4.94
50 51 6.263842 TCAACGATGATATAACCTCTTACGGT 59.736 38.462 0.00 0.00 39.48 4.83
51 52 6.675026 TCAACGATGATATAACCTCTTACGG 58.325 40.000 0.00 0.00 0.00 4.02
52 53 7.201359 GCATCAACGATGATATAACCTCTTACG 60.201 40.741 7.95 0.00 44.53 3.18
53 54 7.598869 TGCATCAACGATGATATAACCTCTTAC 59.401 37.037 7.95 0.00 44.53 2.34
54 55 7.598869 GTGCATCAACGATGATATAACCTCTTA 59.401 37.037 7.95 0.00 44.53 2.10
55 56 6.425114 GTGCATCAACGATGATATAACCTCTT 59.575 38.462 7.95 0.00 44.53 2.85
56 57 5.928839 GTGCATCAACGATGATATAACCTCT 59.071 40.000 7.95 0.00 44.53 3.69
57 58 5.164051 CGTGCATCAACGATGATATAACCTC 60.164 44.000 7.95 0.00 44.53 3.85
58 59 4.686091 CGTGCATCAACGATGATATAACCT 59.314 41.667 7.95 0.00 44.53 3.50
59 60 4.684242 TCGTGCATCAACGATGATATAACC 59.316 41.667 7.95 0.00 46.99 2.85
60 61 5.822584 TCGTGCATCAACGATGATATAAC 57.177 39.130 7.95 6.24 46.99 1.89
70 71 0.858583 TGACAAGTCGTGCATCAACG 59.141 50.000 0.00 0.00 44.92 4.10
71 72 2.480037 TCATGACAAGTCGTGCATCAAC 59.520 45.455 15.75 0.00 44.17 3.18
72 73 2.765122 TCATGACAAGTCGTGCATCAA 58.235 42.857 15.75 0.00 44.17 2.57
73 74 2.453983 TCATGACAAGTCGTGCATCA 57.546 45.000 15.75 0.00 44.17 3.07
74 75 3.811722 TTTCATGACAAGTCGTGCATC 57.188 42.857 15.75 0.00 44.17 3.91
75 76 3.304659 GGTTTTCATGACAAGTCGTGCAT 60.305 43.478 15.75 0.00 44.17 3.96
76 77 2.032799 GGTTTTCATGACAAGTCGTGCA 59.967 45.455 15.75 4.30 44.17 4.57
77 78 2.604614 GGGTTTTCATGACAAGTCGTGC 60.605 50.000 15.75 3.99 44.17 5.34
78 79 2.616376 TGGGTTTTCATGACAAGTCGTG 59.384 45.455 14.67 14.67 45.48 4.35
79 80 2.925724 TGGGTTTTCATGACAAGTCGT 58.074 42.857 0.00 0.00 0.00 4.34
80 81 3.501828 TCATGGGTTTTCATGACAAGTCG 59.498 43.478 0.00 0.00 45.81 4.18
126 127 6.648725 AAAGAATCAGGTTATTTCTCGTCG 57.351 37.500 0.00 0.00 0.00 5.12
171 172 5.506317 GCGCTGTGGCAATAAGATTTAGAAT 60.506 40.000 0.00 0.00 38.60 2.40
181 182 3.130819 CCCGCGCTGTGGCAATAA 61.131 61.111 5.56 0.00 38.60 1.40
229 236 0.039798 TGCGAGCGACGAGTAAAGTT 60.040 50.000 0.00 0.00 45.77 2.66
236 243 1.057636 TTTAAGTTGCGAGCGACGAG 58.942 50.000 9.54 0.00 45.77 4.18
240 247 2.352034 TGTTTGTTTAAGTTGCGAGCGA 59.648 40.909 0.00 0.00 0.00 4.93
245 252 3.434637 AGCACTGTTTGTTTAAGTTGCG 58.565 40.909 0.00 0.00 0.00 4.85
246 253 5.578776 AGTAGCACTGTTTGTTTAAGTTGC 58.421 37.500 0.00 0.00 0.00 4.17
247 254 6.199393 GGAGTAGCACTGTTTGTTTAAGTTG 58.801 40.000 0.00 0.00 0.00 3.16
248 255 5.298527 GGGAGTAGCACTGTTTGTTTAAGTT 59.701 40.000 0.00 0.00 0.00 2.66
249 256 4.820173 GGGAGTAGCACTGTTTGTTTAAGT 59.180 41.667 0.00 0.00 0.00 2.24
250 257 5.063880 AGGGAGTAGCACTGTTTGTTTAAG 58.936 41.667 0.00 0.00 0.00 1.85
252 259 4.347000 AGAGGGAGTAGCACTGTTTGTTTA 59.653 41.667 0.00 0.00 0.00 2.01
255 262 2.037772 CAGAGGGAGTAGCACTGTTTGT 59.962 50.000 0.00 0.00 0.00 2.83
256 263 2.037772 ACAGAGGGAGTAGCACTGTTTG 59.962 50.000 0.00 0.00 38.41 2.93
258 265 1.896465 GACAGAGGGAGTAGCACTGTT 59.104 52.381 0.00 0.00 41.01 3.16
260 267 0.820871 GGACAGAGGGAGTAGCACTG 59.179 60.000 0.00 0.00 35.14 3.66
261 268 0.681564 CGGACAGAGGGAGTAGCACT 60.682 60.000 0.00 0.00 0.00 4.40
263 270 1.379977 CCGGACAGAGGGAGTAGCA 60.380 63.158 0.00 0.00 0.00 3.49
264 271 0.683504 TTCCGGACAGAGGGAGTAGC 60.684 60.000 1.83 0.00 33.01 3.58
266 273 2.544844 ATTTCCGGACAGAGGGAGTA 57.455 50.000 1.83 0.00 33.01 2.59
267 274 2.108970 GTATTTCCGGACAGAGGGAGT 58.891 52.381 1.83 0.00 33.01 3.85
268 275 2.389715 AGTATTTCCGGACAGAGGGAG 58.610 52.381 1.83 0.00 33.01 4.30
269 276 2.500098 CAAGTATTTCCGGACAGAGGGA 59.500 50.000 1.83 0.00 0.00 4.20
270 277 2.236395 ACAAGTATTTCCGGACAGAGGG 59.764 50.000 1.83 0.00 0.00 4.30
271 278 3.522553 GACAAGTATTTCCGGACAGAGG 58.477 50.000 1.83 0.00 0.00 3.69
272 279 3.179830 CGACAAGTATTTCCGGACAGAG 58.820 50.000 1.83 0.00 0.00 3.35
273 280 2.094390 CCGACAAGTATTTCCGGACAGA 60.094 50.000 1.83 0.00 42.49 3.41
274 281 2.094390 TCCGACAAGTATTTCCGGACAG 60.094 50.000 1.83 0.00 43.47 3.51
275 282 1.894466 TCCGACAAGTATTTCCGGACA 59.106 47.619 1.83 0.00 43.47 4.02
276 283 2.537401 CTCCGACAAGTATTTCCGGAC 58.463 52.381 1.83 0.00 43.47 4.79
277 284 1.479323 CCTCCGACAAGTATTTCCGGA 59.521 52.381 0.00 0.00 45.74 5.14
278 285 1.479323 TCCTCCGACAAGTATTTCCGG 59.521 52.381 0.00 0.00 41.36 5.14
279 286 2.953466 TCCTCCGACAAGTATTTCCG 57.047 50.000 0.00 0.00 0.00 4.30
280 287 3.877508 CCATTCCTCCGACAAGTATTTCC 59.122 47.826 0.00 0.00 0.00 3.13
281 288 4.766375 TCCATTCCTCCGACAAGTATTTC 58.234 43.478 0.00 0.00 0.00 2.17
282 289 4.837093 TCCATTCCTCCGACAAGTATTT 57.163 40.909 0.00 0.00 0.00 1.40
283 290 4.164221 ACATCCATTCCTCCGACAAGTATT 59.836 41.667 0.00 0.00 0.00 1.89
284 291 3.711704 ACATCCATTCCTCCGACAAGTAT 59.288 43.478 0.00 0.00 0.00 2.12
285 292 3.104512 ACATCCATTCCTCCGACAAGTA 58.895 45.455 0.00 0.00 0.00 2.24
286 293 1.909302 ACATCCATTCCTCCGACAAGT 59.091 47.619 0.00 0.00 0.00 3.16
287 294 2.698855 ACATCCATTCCTCCGACAAG 57.301 50.000 0.00 0.00 0.00 3.16
288 295 3.967326 AGATACATCCATTCCTCCGACAA 59.033 43.478 0.00 0.00 0.00 3.18
289 296 3.576861 AGATACATCCATTCCTCCGACA 58.423 45.455 0.00 0.00 0.00 4.35
290 297 5.010933 TCTAGATACATCCATTCCTCCGAC 58.989 45.833 0.00 0.00 0.00 4.79
291 298 5.010933 GTCTAGATACATCCATTCCTCCGA 58.989 45.833 0.00 0.00 0.00 4.55
292 299 4.767409 TGTCTAGATACATCCATTCCTCCG 59.233 45.833 0.00 0.00 0.00 4.63
293 300 6.865834 ATGTCTAGATACATCCATTCCTCC 57.134 41.667 0.00 0.00 35.08 4.30
312 319 9.826574 TGGATGTACCTACAACTAAAATATGTC 57.173 33.333 0.00 0.00 39.99 3.06
321 328 9.116067 GCATAAAAATGGATGTACCTACAACTA 57.884 33.333 0.00 0.00 39.99 2.24
322 329 7.613801 TGCATAAAAATGGATGTACCTACAACT 59.386 33.333 0.00 0.00 39.99 3.16
323 330 7.767261 TGCATAAAAATGGATGTACCTACAAC 58.233 34.615 0.00 0.00 39.99 3.32
324 331 7.946381 TGCATAAAAATGGATGTACCTACAA 57.054 32.000 0.00 0.00 39.99 2.41
325 332 8.532186 AATGCATAAAAATGGATGTACCTACA 57.468 30.769 0.00 0.00 40.98 2.74
326 333 9.463443 GAAATGCATAAAAATGGATGTACCTAC 57.537 33.333 0.00 0.00 39.86 3.18
327 334 9.420118 AGAAATGCATAAAAATGGATGTACCTA 57.580 29.630 0.00 0.00 39.86 3.08
328 335 8.310122 AGAAATGCATAAAAATGGATGTACCT 57.690 30.769 0.00 0.00 39.86 3.08
329 336 7.653311 GGAGAAATGCATAAAAATGGATGTACC 59.347 37.037 0.00 0.00 32.82 3.34
330 337 7.379529 CGGAGAAATGCATAAAAATGGATGTAC 59.620 37.037 0.00 0.00 32.82 2.90
331 338 7.068103 ACGGAGAAATGCATAAAAATGGATGTA 59.932 33.333 0.00 0.00 32.82 2.29
332 339 6.127366 ACGGAGAAATGCATAAAAATGGATGT 60.127 34.615 0.00 0.00 32.82 3.06
333 340 6.275335 ACGGAGAAATGCATAAAAATGGATG 58.725 36.000 0.00 0.00 32.82 3.51
334 341 6.461509 GGACGGAGAAATGCATAAAAATGGAT 60.462 38.462 0.00 0.00 33.93 3.41
335 342 5.163561 GGACGGAGAAATGCATAAAAATGGA 60.164 40.000 0.00 0.00 0.00 3.41
336 343 5.043248 GGACGGAGAAATGCATAAAAATGG 58.957 41.667 0.00 0.00 0.00 3.16
337 344 4.734854 CGGACGGAGAAATGCATAAAAATG 59.265 41.667 0.00 0.00 0.00 2.32
338 345 4.202010 CCGGACGGAGAAATGCATAAAAAT 60.202 41.667 4.40 0.00 37.50 1.82
339 346 3.127895 CCGGACGGAGAAATGCATAAAAA 59.872 43.478 4.40 0.00 37.50 1.94
340 347 2.680841 CCGGACGGAGAAATGCATAAAA 59.319 45.455 4.40 0.00 37.50 1.52
341 348 2.093394 TCCGGACGGAGAAATGCATAAA 60.093 45.455 9.76 0.00 39.76 1.40
342 349 1.483004 TCCGGACGGAGAAATGCATAA 59.517 47.619 9.76 0.00 39.76 1.90
343 350 1.116308 TCCGGACGGAGAAATGCATA 58.884 50.000 9.76 0.00 39.76 3.14
344 351 0.251916 TTCCGGACGGAGAAATGCAT 59.748 50.000 13.64 0.00 46.06 3.96
345 352 0.035598 TTTCCGGACGGAGAAATGCA 59.964 50.000 13.64 0.00 46.06 3.96
346 353 1.379527 ATTTCCGGACGGAGAAATGC 58.620 50.000 13.64 0.00 46.06 3.56
347 354 3.793559 AGTATTTCCGGACGGAGAAATG 58.206 45.455 13.64 0.00 46.06 2.32
348 355 4.189231 CAAGTATTTCCGGACGGAGAAAT 58.811 43.478 13.64 13.47 46.06 2.17
349 356 3.007182 ACAAGTATTTCCGGACGGAGAAA 59.993 43.478 13.64 6.93 46.06 2.52
350 357 2.564062 ACAAGTATTTCCGGACGGAGAA 59.436 45.455 13.64 11.22 46.06 2.87
351 358 2.165030 GACAAGTATTTCCGGACGGAGA 59.835 50.000 13.64 10.06 46.06 3.71
352 359 2.537401 GACAAGTATTTCCGGACGGAG 58.463 52.381 13.64 3.15 46.06 4.63
353 360 1.135315 CGACAAGTATTTCCGGACGGA 60.135 52.381 1.83 9.76 43.52 4.69
354 361 1.274596 CGACAAGTATTTCCGGACGG 58.725 55.000 1.83 3.96 0.00 4.79
355 362 1.135315 TCCGACAAGTATTTCCGGACG 60.135 52.381 1.83 0.00 43.47 4.79
356 363 2.537401 CTCCGACAAGTATTTCCGGAC 58.463 52.381 1.83 0.00 43.47 4.79
357 364 1.479323 CCTCCGACAAGTATTTCCGGA 59.521 52.381 0.00 0.00 45.74 5.14
358 365 1.479323 TCCTCCGACAAGTATTTCCGG 59.521 52.381 0.00 0.00 41.36 5.14
359 366 2.953466 TCCTCCGACAAGTATTTCCG 57.047 50.000 0.00 0.00 0.00 4.30
360 367 3.877508 CCATTCCTCCGACAAGTATTTCC 59.122 47.826 0.00 0.00 0.00 3.13
361 368 4.766375 TCCATTCCTCCGACAAGTATTTC 58.234 43.478 0.00 0.00 0.00 2.17
362 369 4.225267 ACTCCATTCCTCCGACAAGTATTT 59.775 41.667 0.00 0.00 0.00 1.40
363 370 3.775316 ACTCCATTCCTCCGACAAGTATT 59.225 43.478 0.00 0.00 0.00 1.89
364 371 3.375699 ACTCCATTCCTCCGACAAGTAT 58.624 45.455 0.00 0.00 0.00 2.12
365 372 2.816411 ACTCCATTCCTCCGACAAGTA 58.184 47.619 0.00 0.00 0.00 2.24
366 373 1.645710 ACTCCATTCCTCCGACAAGT 58.354 50.000 0.00 0.00 0.00 3.16
367 374 2.761208 AGTACTCCATTCCTCCGACAAG 59.239 50.000 0.00 0.00 0.00 3.16
368 375 2.816411 AGTACTCCATTCCTCCGACAA 58.184 47.619 0.00 0.00 0.00 3.18
369 376 2.526888 AGTACTCCATTCCTCCGACA 57.473 50.000 0.00 0.00 0.00 4.35
370 377 3.067883 GGTTAGTACTCCATTCCTCCGAC 59.932 52.174 0.00 0.00 0.00 4.79
371 378 3.294214 GGTTAGTACTCCATTCCTCCGA 58.706 50.000 0.00 0.00 0.00 4.55
372 379 3.028850 TGGTTAGTACTCCATTCCTCCG 58.971 50.000 0.00 0.00 0.00 4.63
373 380 4.224370 TGTTGGTTAGTACTCCATTCCTCC 59.776 45.833 0.00 0.00 33.50 4.30
374 381 5.416271 TGTTGGTTAGTACTCCATTCCTC 57.584 43.478 0.00 0.00 33.50 3.71
375 382 5.309806 AGTTGTTGGTTAGTACTCCATTCCT 59.690 40.000 0.00 0.00 33.50 3.36
376 383 5.411669 CAGTTGTTGGTTAGTACTCCATTCC 59.588 44.000 0.00 0.00 33.50 3.01
377 384 6.228258 TCAGTTGTTGGTTAGTACTCCATTC 58.772 40.000 0.00 0.00 33.50 2.67
378 385 6.182507 TCAGTTGTTGGTTAGTACTCCATT 57.817 37.500 0.00 0.00 33.50 3.16
379 386 5.818678 TCAGTTGTTGGTTAGTACTCCAT 57.181 39.130 0.00 0.00 33.50 3.41
380 387 5.818678 ATCAGTTGTTGGTTAGTACTCCA 57.181 39.130 0.00 0.00 0.00 3.86
381 388 6.313164 GCTTATCAGTTGTTGGTTAGTACTCC 59.687 42.308 0.00 0.00 0.00 3.85
382 389 6.872020 TGCTTATCAGTTGTTGGTTAGTACTC 59.128 38.462 0.00 0.00 0.00 2.59
383 390 6.765403 TGCTTATCAGTTGTTGGTTAGTACT 58.235 36.000 0.00 0.00 0.00 2.73
384 391 7.429636 TTGCTTATCAGTTGTTGGTTAGTAC 57.570 36.000 0.00 0.00 0.00 2.73
385 392 7.335924 GGATTGCTTATCAGTTGTTGGTTAGTA 59.664 37.037 2.57 0.00 34.77 1.82
386 393 6.151144 GGATTGCTTATCAGTTGTTGGTTAGT 59.849 38.462 2.57 0.00 34.77 2.24
391 398 3.131046 GGGGATTGCTTATCAGTTGTTGG 59.869 47.826 2.57 0.00 34.77 3.77
393 400 3.245586 TGGGGGATTGCTTATCAGTTGTT 60.246 43.478 2.57 0.00 34.77 2.83
401 408 2.175715 GAGAAGGTGGGGGATTGCTTAT 59.824 50.000 0.00 0.00 0.00 1.73
406 413 1.224592 CGGAGAAGGTGGGGGATTG 59.775 63.158 0.00 0.00 0.00 2.67
424 431 1.059525 GTTTAAGCAGAGCGAGCGC 59.940 57.895 6.78 6.78 42.33 5.92
426 433 1.462541 CGTTGTTTAAGCAGAGCGAGC 60.463 52.381 7.01 0.00 0.00 5.03
455 462 4.762251 ACTAAGAAACTGAAAGCATGGTCC 59.238 41.667 0.00 0.00 37.60 4.46
457 464 7.121315 GGATTACTAAGAAACTGAAAGCATGGT 59.879 37.037 0.00 0.00 37.60 3.55
467 474 8.030106 GGATAGGATCGGATTACTAAGAAACTG 58.970 40.741 7.23 0.00 0.00 3.16
468 475 7.728981 TGGATAGGATCGGATTACTAAGAAACT 59.271 37.037 7.23 0.00 0.00 2.66
469 476 7.813627 GTGGATAGGATCGGATTACTAAGAAAC 59.186 40.741 7.23 2.65 0.00 2.78
470 477 7.039223 GGTGGATAGGATCGGATTACTAAGAAA 60.039 40.741 7.23 0.00 0.00 2.52
477 485 3.087031 TCGGTGGATAGGATCGGATTAC 58.913 50.000 0.00 0.00 0.00 1.89
542 550 0.884704 GGACTGGTTCAAAGCGCAGA 60.885 55.000 11.47 0.69 0.00 4.26
543 551 0.886490 AGGACTGGTTCAAAGCGCAG 60.886 55.000 11.47 0.00 0.00 5.18
544 552 1.148273 AGGACTGGTTCAAAGCGCA 59.852 52.632 11.47 0.00 0.00 6.09
547 555 1.000938 CAAGCAGGACTGGTTCAAAGC 60.001 52.381 13.29 0.00 47.00 3.51
548 556 1.000938 GCAAGCAGGACTGGTTCAAAG 60.001 52.381 13.29 4.70 47.00 2.77
557 565 0.322008 GGTAGCAAGCAAGCAGGACT 60.322 55.000 3.19 0.00 36.85 3.85
561 573 0.671781 AGACGGTAGCAAGCAAGCAG 60.672 55.000 3.19 0.00 36.85 4.24
589 601 6.100004 CACGTACATAGTGGTTCAAAGAGAT 58.900 40.000 0.00 0.00 36.06 2.75
634 746 9.699703 AACTCAAAAGAAAGACTAGAGATGTAC 57.300 33.333 0.00 0.00 0.00 2.90
636 748 9.620259 AAAACTCAAAAGAAAGACTAGAGATGT 57.380 29.630 0.00 0.00 0.00 3.06
638 750 9.838339 TCAAAACTCAAAAGAAAGACTAGAGAT 57.162 29.630 0.00 0.00 0.00 2.75
639 751 9.838339 ATCAAAACTCAAAAGAAAGACTAGAGA 57.162 29.630 0.00 0.00 0.00 3.10
653 765 9.677567 GCAGACTAAACATAATCAAAACTCAAA 57.322 29.630 0.00 0.00 0.00 2.69
654 766 9.066892 AGCAGACTAAACATAATCAAAACTCAA 57.933 29.630 0.00 0.00 0.00 3.02
655 767 8.621532 AGCAGACTAAACATAATCAAAACTCA 57.378 30.769 0.00 0.00 0.00 3.41
656 768 8.940952 AGAGCAGACTAAACATAATCAAAACTC 58.059 33.333 0.00 0.00 0.00 3.01
657 769 8.854614 AGAGCAGACTAAACATAATCAAAACT 57.145 30.769 0.00 0.00 0.00 2.66
673 785 4.202305 GCTTGGGTATGATAAGAGCAGACT 60.202 45.833 0.00 0.00 0.00 3.24
679 791 6.656632 TGTAGAGCTTGGGTATGATAAGAG 57.343 41.667 0.00 0.00 0.00 2.85
680 792 6.782494 TCATGTAGAGCTTGGGTATGATAAGA 59.218 38.462 0.00 0.00 0.00 2.10
681 793 6.997655 TCATGTAGAGCTTGGGTATGATAAG 58.002 40.000 0.00 0.00 0.00 1.73
682 794 6.994421 TCATGTAGAGCTTGGGTATGATAA 57.006 37.500 0.00 0.00 0.00 1.75
683 795 6.014242 CCTTCATGTAGAGCTTGGGTATGATA 60.014 42.308 0.12 0.00 0.00 2.15
684 796 5.221803 CCTTCATGTAGAGCTTGGGTATGAT 60.222 44.000 0.12 0.00 0.00 2.45
686 798 4.101585 TCCTTCATGTAGAGCTTGGGTATG 59.898 45.833 0.12 0.00 0.00 2.39
687 799 4.298626 TCCTTCATGTAGAGCTTGGGTAT 58.701 43.478 0.12 0.00 0.00 2.73
689 801 2.551270 TCCTTCATGTAGAGCTTGGGT 58.449 47.619 0.12 0.00 0.00 4.51
690 802 3.634397 TTCCTTCATGTAGAGCTTGGG 57.366 47.619 0.12 0.00 0.00 4.12
691 803 5.964958 TTTTTCCTTCATGTAGAGCTTGG 57.035 39.130 0.12 0.00 0.00 3.61
713 825 2.166254 CTGTGAAGCACCCAGTGTTTTT 59.834 45.455 0.00 0.00 37.12 1.94
718 849 1.228063 AGCTGTGAAGCACCCAGTG 60.228 57.895 0.00 0.00 37.25 3.66
719 850 1.228063 CAGCTGTGAAGCACCCAGT 60.228 57.895 5.25 0.00 37.25 4.00
723 854 2.160417 GTCATTACAGCTGTGAAGCACC 59.840 50.000 29.57 7.26 37.25 5.01
739 870 5.010282 AGGAAATTCTTTACTGGCGTCATT 58.990 37.500 0.00 0.00 31.02 2.57
744 883 6.338937 AGTACTAGGAAATTCTTTACTGGCG 58.661 40.000 0.00 0.00 35.65 5.69
772 911 7.310664 GTGTGTTCTGCATTGTAGTACTACTA 58.689 38.462 28.56 23.25 37.00 1.82
773 912 6.157211 GTGTGTTCTGCATTGTAGTACTACT 58.843 40.000 28.56 11.16 37.00 2.57
774 913 5.347907 GGTGTGTTCTGCATTGTAGTACTAC 59.652 44.000 23.58 23.58 36.63 2.73
777 916 4.152402 CAGGTGTGTTCTGCATTGTAGTAC 59.848 45.833 4.88 4.88 0.00 2.73
778 917 4.314961 CAGGTGTGTTCTGCATTGTAGTA 58.685 43.478 1.55 0.00 0.00 1.82
779 918 3.141398 CAGGTGTGTTCTGCATTGTAGT 58.859 45.455 1.55 0.00 0.00 2.73
780 919 2.485426 CCAGGTGTGTTCTGCATTGTAG 59.515 50.000 0.00 0.00 0.00 2.74
781 920 2.503331 CCAGGTGTGTTCTGCATTGTA 58.497 47.619 0.00 0.00 0.00 2.41
782 921 1.321474 CCAGGTGTGTTCTGCATTGT 58.679 50.000 0.00 0.00 0.00 2.71
783 922 0.038892 GCCAGGTGTGTTCTGCATTG 60.039 55.000 0.00 0.00 0.00 2.82
790 929 3.317993 ACAATACTTTGCCAGGTGTGTTC 59.682 43.478 0.00 0.00 36.22 3.18
797 936 3.370978 CAGTACGACAATACTTTGCCAGG 59.629 47.826 0.00 0.00 36.22 4.45
804 943 8.896744 TGTAGTATTAGCAGTACGACAATACTT 58.103 33.333 20.30 11.26 40.82 2.24
812 951 5.066764 TGCACATGTAGTATTAGCAGTACGA 59.933 40.000 0.00 0.00 0.00 3.43
814 953 7.254455 CCTTTGCACATGTAGTATTAGCAGTAC 60.254 40.741 0.00 0.00 28.74 2.73
819 958 6.867662 ATCCTTTGCACATGTAGTATTAGC 57.132 37.500 0.00 0.00 0.00 3.09
824 963 6.056090 TGGTAATCCTTTGCACATGTAGTA 57.944 37.500 0.00 0.00 34.23 1.82
825 964 4.917385 TGGTAATCCTTTGCACATGTAGT 58.083 39.130 0.00 0.00 34.23 2.73
826 965 5.895636 TTGGTAATCCTTTGCACATGTAG 57.104 39.130 0.00 0.00 34.23 2.74
852 991 2.504274 TTTGGCTGTCGGTCCGAGT 61.504 57.895 15.95 0.00 36.23 4.18
859 998 0.602638 TGCTGTAGTTTGGCTGTCGG 60.603 55.000 0.00 0.00 0.00 4.79
897 1036 0.179225 CTTTGGAATCGTGTTCCGCG 60.179 55.000 0.00 0.00 41.43 6.46
950 1108 0.179094 CACTATTAAGGCCCGTGCGA 60.179 55.000 0.00 0.00 38.85 5.10
995 1159 1.700955 GCAGGCCTTGATCATGGAAT 58.299 50.000 27.35 13.82 0.00 3.01
1589 1763 1.688735 CATCGGGCATGAGTTCTAGGA 59.311 52.381 0.00 0.00 33.80 2.94
1590 1764 1.270518 CCATCGGGCATGAGTTCTAGG 60.271 57.143 0.00 0.00 33.80 3.02
1735 2302 9.889128 AGGATCATCAAAAAGAAAAGAAAAACA 57.111 25.926 0.00 0.00 0.00 2.83
1802 2380 8.736244 GCTATGTATTTTTAGTTTGTCCCAGAA 58.264 33.333 0.00 0.00 0.00 3.02
1821 2399 5.163764 CCTGTCTTGCAAAAATCGCTATGTA 60.164 40.000 0.00 0.00 0.00 2.29
1824 2402 3.428045 GCCTGTCTTGCAAAAATCGCTAT 60.428 43.478 0.00 0.00 0.00 2.97
1835 2414 0.472044 TGTTAGTGGCCTGTCTTGCA 59.528 50.000 3.32 0.00 0.00 4.08
1896 4952 1.019673 CCAATGCCTTCATCACTCCG 58.980 55.000 0.00 0.00 31.27 4.63
1996 5053 5.920840 GGAATCAAACAGTTCTTTACTTGGC 59.079 40.000 0.00 0.00 33.85 4.52
2017 5074 2.968156 CGACACCAAACGCGGGAA 60.968 61.111 12.47 0.00 0.00 3.97
2018 5075 4.973055 CCGACACCAAACGCGGGA 62.973 66.667 12.47 0.00 40.08 5.14
2022 5079 2.175811 GATGCCGACACCAAACGC 59.824 61.111 0.00 0.00 0.00 4.84
2026 5083 0.396435 AGAACAGATGCCGACACCAA 59.604 50.000 0.00 0.00 0.00 3.67
2031 5088 2.263077 CACACTAGAACAGATGCCGAC 58.737 52.381 0.00 0.00 0.00 4.79
2034 5091 1.373570 GCCACACTAGAACAGATGCC 58.626 55.000 0.00 0.00 0.00 4.40
2094 5151 8.664798 TCACATGCAACTACAAGAACAATATAC 58.335 33.333 0.00 0.00 0.00 1.47
2143 5201 2.282674 CCAGGCTCCTGCAAAGCA 60.283 61.111 19.24 0.00 42.35 3.91
2144 5202 3.066814 CCCAGGCTCCTGCAAAGC 61.067 66.667 10.37 11.41 42.35 3.51
2145 5203 2.362120 CCCCAGGCTCCTGCAAAG 60.362 66.667 10.37 0.00 42.35 2.77
2197 5260 5.652452 AGTGAAAAACTTTCTTAGCACCAGT 59.348 36.000 0.00 0.00 34.57 4.00
2224 5287 2.685380 AGAGGGCCAGGAGTTCGG 60.685 66.667 6.18 0.00 0.00 4.30
2330 5393 2.555757 AGCCAGACTTGTCAAATTGAGC 59.444 45.455 0.00 0.00 0.00 4.26
2442 5512 6.765989 TGGTAATAGTTAATGCACACTCATCC 59.234 38.462 0.00 0.00 0.00 3.51
2446 5516 9.104965 TGTTATGGTAATAGTTAATGCACACTC 57.895 33.333 0.00 0.00 0.00 3.51
2563 5634 4.206375 TGCAATTTGGTCTCTTTGTCTCA 58.794 39.130 0.00 0.00 0.00 3.27
2568 5639 8.829612 ACTTAAAATTGCAATTTGGTCTCTTTG 58.170 29.630 32.23 18.19 38.53 2.77
2641 5712 9.833917 TGGAATTTGGAATTGTATGTACGTATA 57.166 29.630 0.00 0.00 0.00 1.47
2755 5841 8.450964 TCGTTTCTCAATCATTTAGTTCATTCC 58.549 33.333 0.00 0.00 0.00 3.01
2779 5865 8.655970 GGAACTTGATAAAATTTGGGAAAATCG 58.344 33.333 0.00 0.00 0.00 3.34
2781 5867 9.859152 TTGGAACTTGATAAAATTTGGGAAAAT 57.141 25.926 0.00 0.00 0.00 1.82
2785 5871 7.847711 TCTTGGAACTTGATAAAATTTGGGA 57.152 32.000 0.00 0.00 0.00 4.37
2795 5881 8.698973 TGGTAATTGTTTCTTGGAACTTGATA 57.301 30.769 0.00 0.00 0.00 2.15
2798 5884 7.432869 TCATGGTAATTGTTTCTTGGAACTTG 58.567 34.615 0.00 0.00 0.00 3.16
2799 5885 7.595819 TCATGGTAATTGTTTCTTGGAACTT 57.404 32.000 0.00 0.00 0.00 2.66
2812 5898 8.407832 TGAGACATAGCAAAATCATGGTAATTG 58.592 33.333 0.00 0.00 36.90 2.32
2814 5900 7.557358 TGTGAGACATAGCAAAATCATGGTAAT 59.443 33.333 0.00 0.00 36.90 1.89
2829 5915 5.877012 AGGTAACATTGCTTGTGAGACATAG 59.123 40.000 0.00 0.00 38.99 2.23
2846 5936 3.818773 GCTCCACTTTTAGCAAGGTAACA 59.181 43.478 0.00 0.00 38.63 2.41
2847 5937 3.818773 TGCTCCACTTTTAGCAAGGTAAC 59.181 43.478 0.00 0.00 45.36 2.50
2849 5939 3.780804 TGCTCCACTTTTAGCAAGGTA 57.219 42.857 0.00 0.00 45.36 3.08
2860 5951 8.063200 AGTAAACTTTAGTTTTTGCTCCACTT 57.937 30.769 12.62 0.00 45.07 3.16
2862 5953 9.447040 CTAAGTAAACTTTAGTTTTTGCTCCAC 57.553 33.333 12.62 4.16 45.07 4.02
2888 5979 9.646336 GGACACGTAAAATGACAATATTATGAC 57.354 33.333 0.00 0.00 0.00 3.06
2895 5986 9.751542 AAATTTTGGACACGTAAAATGACAATA 57.248 25.926 7.36 0.00 36.80 1.90
2898 5989 9.239002 CTAAAATTTTGGACACGTAAAATGACA 57.761 29.630 13.76 0.00 36.80 3.58
2899 5990 9.240159 ACTAAAATTTTGGACACGTAAAATGAC 57.760 29.630 19.79 0.00 36.80 3.06
2919 6017 4.585162 TGCCGAAGAATGGGAAAACTAAAA 59.415 37.500 0.00 0.00 0.00 1.52
2931 6029 6.732154 AGATCACAAATATTGCCGAAGAATG 58.268 36.000 0.00 0.00 0.00 2.67
2932 6030 6.949352 AGATCACAAATATTGCCGAAGAAT 57.051 33.333 0.00 0.00 0.00 2.40
3064 6273 2.158813 AGACCAAAACATCGTGTGTCCT 60.159 45.455 0.00 0.00 41.14 3.85
3232 6452 1.266989 GGAACAAACTTCTTGAGGCCG 59.733 52.381 0.00 0.00 0.00 6.13
3374 6594 3.763360 GACAATGTTCCATGATGGGTTCA 59.237 43.478 12.26 8.86 38.32 3.18
3379 6599 6.167685 ACATTTTGACAATGTTCCATGATGG 58.832 36.000 4.74 4.74 37.58 3.51
3393 6613 5.945191 TCCATCAAGCATCTACATTTTGACA 59.055 36.000 0.00 0.00 31.34 3.58
3434 6654 2.288518 TGTGCGACACAGTAATACAGCA 60.289 45.455 8.32 0.00 39.62 4.41
3444 6664 2.753989 TGTGAAATTGTGCGACACAG 57.246 45.000 11.48 0.00 45.39 3.66
3512 6739 1.473434 GGGTAGTGCCACTAGACATGC 60.473 57.143 4.44 0.00 39.65 4.06
3524 6751 2.474410 AGTACAAAGCAGGGTAGTGC 57.526 50.000 0.00 0.00 44.35 4.40
3542 6770 2.229792 ACAACCCAAGCACACACATAG 58.770 47.619 0.00 0.00 0.00 2.23
3543 6771 2.356665 ACAACCCAAGCACACACATA 57.643 45.000 0.00 0.00 0.00 2.29
3544 6772 1.484038 AACAACCCAAGCACACACAT 58.516 45.000 0.00 0.00 0.00 3.21
3589 6820 0.396435 TCAATTGACAGTGACCCGCT 59.604 50.000 3.38 0.00 0.00 5.52
3620 6851 2.680841 TGACACTAGTGGCACAAAACAC 59.319 45.455 27.87 7.56 45.07 3.32
3653 6884 5.639757 TGGAACGTGCAGAATAATGAATTG 58.360 37.500 0.00 0.00 0.00 2.32
3682 6914 7.665974 GTCAAATATCCCCTAAATAGGTCAAGG 59.334 40.741 5.78 0.26 42.03 3.61
3683 6915 7.387948 CGTCAAATATCCCCTAAATAGGTCAAG 59.612 40.741 5.78 0.00 42.03 3.02
3709 6941 8.038944 TGGCCGAATATGTAGGATATTTAGAAC 58.961 37.037 0.00 0.00 0.00 3.01
3796 7029 5.009631 GGCCAAATAGGGAAGCAAATTTTT 58.990 37.500 0.00 0.00 38.09 1.94
3829 7062 8.002459 ACTTTAGGTGTCAAATAGGGAAGAAAA 58.998 33.333 0.00 0.00 0.00 2.29
3864 7097 6.978343 TGGACGAAAATGTTGTATAAGGAG 57.022 37.500 0.00 0.00 0.00 3.69
3878 7111 6.039493 TGCACTTAACCTAAAATGGACGAAAA 59.961 34.615 0.00 0.00 0.00 2.29
3881 7114 4.643463 TGCACTTAACCTAAAATGGACGA 58.357 39.130 0.00 0.00 0.00 4.20
4064 7311 1.271656 CCGTCTAGGAGACCGTGTTTT 59.728 52.381 1.13 0.00 42.12 2.43
4119 7366 7.201591 CGGTATAGGTAACATATACGAGGAGTG 60.202 44.444 0.00 0.00 37.10 3.51
4120 7367 6.820656 CGGTATAGGTAACATATACGAGGAGT 59.179 42.308 0.00 0.00 37.10 3.85
4121 7368 6.820656 ACGGTATAGGTAACATATACGAGGAG 59.179 42.308 0.00 0.00 37.10 3.69
4122 7369 6.595326 CACGGTATAGGTAACATATACGAGGA 59.405 42.308 0.00 0.00 37.10 3.71
4123 7370 6.595326 TCACGGTATAGGTAACATATACGAGG 59.405 42.308 0.00 0.00 37.10 4.63
4124 7371 7.601073 TCACGGTATAGGTAACATATACGAG 57.399 40.000 0.00 0.00 37.10 4.18
4125 7372 9.665719 TTATCACGGTATAGGTAACATATACGA 57.334 33.333 0.00 0.00 37.10 3.43
4130 7377 9.985730 CCTTTTTATCACGGTATAGGTAACATA 57.014 33.333 0.00 0.00 41.41 2.29
4131 7378 8.707449 TCCTTTTTATCACGGTATAGGTAACAT 58.293 33.333 0.00 0.00 41.41 2.71
4132 7379 8.076910 TCCTTTTTATCACGGTATAGGTAACA 57.923 34.615 0.00 0.00 41.41 2.41
4133 7380 8.947055 TTCCTTTTTATCACGGTATAGGTAAC 57.053 34.615 0.00 0.00 0.00 2.50
4135 7382 9.550406 CATTTCCTTTTTATCACGGTATAGGTA 57.450 33.333 0.00 0.00 0.00 3.08
4191 7439 3.554692 GACGCCGACTGATTGCCG 61.555 66.667 0.00 0.00 0.00 5.69
4253 7501 8.645814 TTGAAATGAAGAGAGTACTAGGTACA 57.354 34.615 0.00 0.00 41.03 2.90
4254 7502 9.924650 TTTTGAAATGAAGAGAGTACTAGGTAC 57.075 33.333 0.00 0.12 39.10 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.