Multiple sequence alignment - TraesCS7D01G217700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G217700 chr7D 100.000 3425 0 0 1 3425 178290737 178294161 0.000000e+00 6325.0
1 TraesCS7D01G217700 chr7D 79.362 1347 232 32 1047 2382 178475050 178476361 0.000000e+00 905.0
2 TraesCS7D01G217700 chr7D 93.043 230 10 3 3201 3425 418196303 418196075 7.080000e-87 331.0
3 TraesCS7D01G217700 chr7D 93.043 230 10 2 3201 3425 418872545 418872317 7.080000e-87 331.0
4 TraesCS7D01G217700 chr7D 92.825 223 10 2 3208 3425 178310700 178310921 5.520000e-83 318.0
5 TraesCS7D01G217700 chr7B 94.888 1780 71 9 808 2581 144483361 144485126 0.000000e+00 2765.0
6 TraesCS7D01G217700 chr7B 79.199 1298 227 31 1023 2309 144517606 144518871 0.000000e+00 861.0
7 TraesCS7D01G217700 chr7B 90.795 239 19 3 2623 2859 144485408 144485645 1.980000e-82 316.0
8 TraesCS7D01G217700 chr7B 93.976 83 4 1 589 670 144482809 144482891 1.290000e-24 124.0
9 TraesCS7D01G217700 chr7B 86.408 103 12 2 670 770 144483247 144483349 1.000000e-20 111.0
10 TraesCS7D01G217700 chr7A 92.490 1771 80 14 808 2572 182384358 182386081 0.000000e+00 2484.0
11 TraesCS7D01G217700 chr7A 78.826 1346 241 30 1047 2382 182561520 182562831 0.000000e+00 867.0
12 TraesCS7D01G217700 chr7A 92.920 226 10 2 3205 3425 365469046 365469270 1.190000e-84 324.0
13 TraesCS7D01G217700 chr7A 89.655 87 5 3 670 752 182384277 182384363 1.300000e-19 108.0
14 TraesCS7D01G217700 chr5D 99.831 590 1 0 1 590 455818103 455817514 0.000000e+00 1085.0
15 TraesCS7D01G217700 chr5D 92.070 227 10 3 3206 3425 266535699 266535474 2.570000e-81 313.0
16 TraesCS7D01G217700 chr5D 87.143 70 8 1 1784 1852 224760899 224760830 1.020000e-10 78.7
17 TraesCS7D01G217700 chr1D 98.302 589 10 0 1 589 225717300 225717888 0.000000e+00 1033.0
18 TraesCS7D01G217700 chr1D 92.889 225 10 3 3206 3425 292604106 292604329 4.260000e-84 322.0
19 TraesCS7D01G217700 chr5B 95.431 569 23 3 22 589 591660168 591660734 0.000000e+00 904.0
20 TraesCS7D01G217700 chr5B 94.203 345 20 0 1 345 407588747 407589091 8.420000e-146 527.0
21 TraesCS7D01G217700 chr5B 95.556 180 8 0 410 589 407589088 407589267 4.320000e-74 289.0
22 TraesCS7D01G217700 chr3B 92.530 589 43 1 1 589 346570562 346569975 0.000000e+00 843.0
23 TraesCS7D01G217700 chr4A 91.400 593 46 3 1 589 473847263 473847854 0.000000e+00 808.0
24 TraesCS7D01G217700 chr4A 100.000 30 0 0 3060 3089 559118231 559118260 4.770000e-04 56.5
25 TraesCS7D01G217700 chr2D 91.685 457 30 2 11 460 235465197 235464742 8.070000e-176 627.0
26 TraesCS7D01G217700 chr2B 94.152 342 20 0 4 345 15732518 15732177 3.920000e-144 521.0
27 TraesCS7D01G217700 chr2B 93.913 345 21 0 1 345 15795127 15794783 3.920000e-144 521.0
28 TraesCS7D01G217700 chr2B 92.609 230 8 6 3202 3425 196964000 196963774 4.260000e-84 322.0
29 TraesCS7D01G217700 chr2B 95.628 183 7 1 407 589 15993103 15992922 3.340000e-75 292.0
30 TraesCS7D01G217700 chr2B 96.591 176 5 1 407 582 15996672 15996498 1.200000e-74 291.0
31 TraesCS7D01G217700 chr2B 95.833 144 5 1 407 550 15732182 15732040 7.390000e-57 231.0
32 TraesCS7D01G217700 chr1A 92.857 224 11 2 3206 3425 216871350 216871572 1.530000e-83 320.0
33 TraesCS7D01G217700 chr6D 92.035 226 12 2 3205 3425 418654407 418654183 2.570000e-81 313.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G217700 chr7D 178290737 178294161 3424 False 6325.0 6325 100.00000 1 3425 1 chr7D.!!$F1 3424
1 TraesCS7D01G217700 chr7D 178475050 178476361 1311 False 905.0 905 79.36200 1047 2382 1 chr7D.!!$F3 1335
2 TraesCS7D01G217700 chr7B 144517606 144518871 1265 False 861.0 861 79.19900 1023 2309 1 chr7B.!!$F1 1286
3 TraesCS7D01G217700 chr7B 144482809 144485645 2836 False 829.0 2765 91.51675 589 2859 4 chr7B.!!$F2 2270
4 TraesCS7D01G217700 chr7A 182384277 182386081 1804 False 1296.0 2484 91.07250 670 2572 2 chr7A.!!$F3 1902
5 TraesCS7D01G217700 chr7A 182561520 182562831 1311 False 867.0 867 78.82600 1047 2382 1 chr7A.!!$F1 1335
6 TraesCS7D01G217700 chr5D 455817514 455818103 589 True 1085.0 1085 99.83100 1 590 1 chr5D.!!$R3 589
7 TraesCS7D01G217700 chr1D 225717300 225717888 588 False 1033.0 1033 98.30200 1 589 1 chr1D.!!$F1 588
8 TraesCS7D01G217700 chr5B 591660168 591660734 566 False 904.0 904 95.43100 22 589 1 chr5B.!!$F1 567
9 TraesCS7D01G217700 chr5B 407588747 407589267 520 False 408.0 527 94.87950 1 589 2 chr5B.!!$F2 588
10 TraesCS7D01G217700 chr3B 346569975 346570562 587 True 843.0 843 92.53000 1 589 1 chr3B.!!$R1 588
11 TraesCS7D01G217700 chr4A 473847263 473847854 591 False 808.0 808 91.40000 1 589 1 chr4A.!!$F1 588
12 TraesCS7D01G217700 chr2B 15992922 15996672 3750 True 291.5 292 96.10950 407 589 2 chr2B.!!$R4 182

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
781 4443 1.001974 TGTGCACTAGTACCAAGCTGG 59.998 52.381 19.41 0.0 45.02 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2621 6469 0.605589 AAGTGTAGGGCAAGCGTTCC 60.606 55.0 0.0 0.0 0.0 3.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
409 411 1.412079 CATGCAGTAGGCCTCTCTCT 58.588 55.000 9.68 0.48 43.89 3.10
410 412 2.591923 CATGCAGTAGGCCTCTCTCTA 58.408 52.381 9.68 0.78 43.89 2.43
616 3918 1.217585 CTGTGTCGTGCAGTCCTGTG 61.218 60.000 0.00 0.00 0.00 3.66
625 3928 3.134401 CAGTCCTGTGTAGCTGCTG 57.866 57.895 13.43 0.00 0.00 4.41
656 3959 5.354513 TGACGTGGCCGAATAATGAAAATAA 59.645 36.000 0.00 0.00 37.88 1.40
662 3965 6.378564 TGGCCGAATAATGAAAATAAAGGTGA 59.621 34.615 0.00 0.00 0.00 4.02
679 4338 2.307049 GTGATGTTTCCGTTTTCGCAG 58.693 47.619 0.00 0.00 42.58 5.18
685 4344 2.673976 TTCCGTTTTCGCAGTAAAGC 57.326 45.000 0.00 0.00 42.58 3.51
691 4350 3.363970 CGTTTTCGCAGTAAAGCTCACAT 60.364 43.478 0.00 0.00 36.22 3.21
747 4409 2.656646 CACCTACTGCGCCACTGA 59.343 61.111 4.18 0.00 0.00 3.41
765 4427 1.804151 TGACTGGCTATTCGTTTGTGC 59.196 47.619 0.00 0.00 0.00 4.57
770 4432 3.000041 TGGCTATTCGTTTGTGCACTAG 59.000 45.455 19.41 10.29 0.00 2.57
772 4434 4.178540 GGCTATTCGTTTGTGCACTAGTA 58.821 43.478 19.41 0.00 0.00 1.82
773 4435 4.032558 GGCTATTCGTTTGTGCACTAGTAC 59.967 45.833 19.41 5.73 0.00 2.73
774 4436 4.032558 GCTATTCGTTTGTGCACTAGTACC 59.967 45.833 19.41 0.00 0.00 3.34
775 4437 3.455990 TTCGTTTGTGCACTAGTACCA 57.544 42.857 19.41 0.00 0.00 3.25
776 4438 3.455990 TCGTTTGTGCACTAGTACCAA 57.544 42.857 19.41 0.00 0.00 3.67
777 4439 3.386486 TCGTTTGTGCACTAGTACCAAG 58.614 45.455 19.41 0.00 0.00 3.61
781 4443 1.001974 TGTGCACTAGTACCAAGCTGG 59.998 52.381 19.41 0.00 45.02 4.85
859 4521 4.460382 CACTGCTACATCTCCCAAAACAAT 59.540 41.667 0.00 0.00 0.00 2.71
890 4552 3.965347 TCTAGTATTAAGCCACCTGGACC 59.035 47.826 0.00 0.00 37.39 4.46
931 4593 4.880537 CCCTGCACGAGCTAGCCG 62.881 72.222 19.72 19.72 42.74 5.52
963 4625 3.069980 ATCCACGCTCCTCGCACTC 62.070 63.158 0.00 0.00 43.23 3.51
1117 4781 2.760385 CGGTGTCCCTCTCCTCCC 60.760 72.222 0.00 0.00 0.00 4.30
1608 5272 3.616721 ACCCAGCAGTTCGTCGCT 61.617 61.111 0.00 0.00 39.66 4.93
1693 5357 3.916544 CCATAGCTGCGCTCCGGA 61.917 66.667 9.73 2.93 40.44 5.14
1737 5401 4.468007 CCGGTTTTCTCGGTTGGT 57.532 55.556 0.00 0.00 42.33 3.67
2055 5719 0.402121 GGGTGGAGCAAGAAGAGGTT 59.598 55.000 0.00 0.00 0.00 3.50
2246 5910 2.367107 GGAGGGGGAGGAGGGAAC 60.367 72.222 0.00 0.00 0.00 3.62
2259 5923 4.778143 GGAACGGTGAGCGGGCAT 62.778 66.667 9.43 0.00 0.00 4.40
2277 5941 2.924290 GCATAATATCGCGGAGAAGGTC 59.076 50.000 6.13 0.00 0.00 3.85
2281 5945 1.758936 TATCGCGGAGAAGGTCAAGA 58.241 50.000 6.13 0.00 0.00 3.02
2296 5960 1.621317 TCAAGACTGTAATGGCGGACA 59.379 47.619 0.00 0.00 0.00 4.02
2409 6073 4.924019 CAACGTTGCCGGGATCTA 57.076 55.556 16.51 0.00 38.78 1.98
2459 6123 3.311322 ACATTTCGAAGAAGCGTGAACAA 59.689 39.130 0.00 0.00 45.90 2.83
2461 6125 0.859232 TCGAAGAAGCGTGAACAAGC 59.141 50.000 4.72 4.72 36.04 4.01
2488 6152 8.859236 ATAATTGCTGTATAGTACCTCGACTA 57.141 34.615 0.00 0.00 36.38 2.59
2511 6175 5.446143 TTGTTAAACAAACGATCTGCCAT 57.554 34.783 0.00 0.00 41.30 4.40
2540 6204 8.871686 ATTGGAAACTGAACAAATGTAAGAAC 57.128 30.769 3.87 0.00 0.00 3.01
2541 6205 6.491394 TGGAAACTGAACAAATGTAAGAACG 58.509 36.000 3.87 0.00 0.00 3.95
2542 6206 6.316640 TGGAAACTGAACAAATGTAAGAACGA 59.683 34.615 0.00 0.00 0.00 3.85
2581 6250 7.513969 GCTGTTACAAAAACCAACGACAAATAC 60.514 37.037 0.00 0.00 0.00 1.89
2583 6252 7.974501 TGTTACAAAAACCAACGACAAATACAT 59.025 29.630 0.00 0.00 0.00 2.29
2594 6442 6.985188 ACGACAAATACATGTGATAAAGCT 57.015 33.333 9.11 0.00 32.57 3.74
2595 6443 8.387354 CAACGACAAATACATGTGATAAAGCTA 58.613 33.333 9.11 0.00 32.57 3.32
2596 6444 8.131455 ACGACAAATACATGTGATAAAGCTAG 57.869 34.615 9.11 0.00 32.57 3.42
2617 6465 5.920193 AGTACAAGTTACGTTAGGGCATA 57.080 39.130 0.00 0.00 0.00 3.14
2618 6466 6.284891 AGTACAAGTTACGTTAGGGCATAA 57.715 37.500 0.00 0.00 0.00 1.90
2619 6467 6.700352 AGTACAAGTTACGTTAGGGCATAAA 58.300 36.000 0.00 0.00 0.00 1.40
2620 6468 5.868043 ACAAGTTACGTTAGGGCATAAAC 57.132 39.130 0.00 0.00 0.00 2.01
2643 6555 0.107831 ACGCTTGCCCTACACTTTCA 59.892 50.000 0.00 0.00 0.00 2.69
2656 6568 5.123186 CCTACACTTTCATCCGCAATACAAA 59.877 40.000 0.00 0.00 0.00 2.83
2669 6581 8.649973 TCCGCAATACAAACAAAATTTAAACT 57.350 26.923 0.00 0.00 0.00 2.66
2719 6631 5.282055 TGTAACCCATGCAAATGACAAAA 57.718 34.783 0.00 0.00 0.00 2.44
2721 6633 6.294473 TGTAACCCATGCAAATGACAAAAAT 58.706 32.000 0.00 0.00 0.00 1.82
2723 6635 5.945466 ACCCATGCAAATGACAAAAATTC 57.055 34.783 0.00 0.00 0.00 2.17
2724 6636 5.374921 ACCCATGCAAATGACAAAAATTCA 58.625 33.333 0.00 0.00 0.00 2.57
2827 6739 2.717044 CCGGTGACCTCGTATGCCA 61.717 63.158 0.00 0.00 0.00 4.92
2863 6775 2.365105 CCCCTCCGTTGCCCTCTA 60.365 66.667 0.00 0.00 0.00 2.43
2864 6776 2.732619 CCCCTCCGTTGCCCTCTAC 61.733 68.421 0.00 0.00 0.00 2.59
2865 6777 1.686110 CCCTCCGTTGCCCTCTACT 60.686 63.158 0.00 0.00 0.00 2.57
2866 6778 1.517832 CCTCCGTTGCCCTCTACTG 59.482 63.158 0.00 0.00 0.00 2.74
2867 6779 1.153549 CTCCGTTGCCCTCTACTGC 60.154 63.158 0.00 0.00 0.00 4.40
2868 6780 2.509336 CCGTTGCCCTCTACTGCG 60.509 66.667 0.00 0.00 0.00 5.18
2869 6781 3.188786 CGTTGCCCTCTACTGCGC 61.189 66.667 0.00 0.00 0.00 6.09
2870 6782 2.820037 GTTGCCCTCTACTGCGCC 60.820 66.667 4.18 0.00 0.00 6.53
2871 6783 4.096003 TTGCCCTCTACTGCGCCC 62.096 66.667 4.18 0.00 0.00 6.13
2892 6804 4.531912 GATGCTCCGCGACGACGA 62.532 66.667 8.23 0.00 42.66 4.20
2893 6805 4.538283 ATGCTCCGCGACGACGAG 62.538 66.667 8.23 7.89 42.66 4.18
2908 6820 4.314440 GAGCCACCACCGCACTCA 62.314 66.667 0.00 0.00 0.00 3.41
2909 6821 4.320456 AGCCACCACCGCACTCAG 62.320 66.667 0.00 0.00 0.00 3.35
2911 6823 4.320456 CCACCACCGCACTCAGCT 62.320 66.667 0.00 0.00 42.61 4.24
2912 6824 2.656646 CACCACCGCACTCAGCTA 59.343 61.111 0.00 0.00 42.61 3.32
2913 6825 1.446792 CACCACCGCACTCAGCTAG 60.447 63.158 0.00 0.00 42.61 3.42
2914 6826 2.185350 CCACCGCACTCAGCTAGG 59.815 66.667 0.00 0.00 42.61 3.02
2915 6827 2.650116 CCACCGCACTCAGCTAGGT 61.650 63.158 0.00 0.00 42.61 3.08
2916 6828 1.320344 CCACCGCACTCAGCTAGGTA 61.320 60.000 0.00 0.00 42.61 3.08
2917 6829 0.101399 CACCGCACTCAGCTAGGTAG 59.899 60.000 0.00 0.00 42.61 3.18
2918 6830 0.323542 ACCGCACTCAGCTAGGTAGT 60.324 55.000 0.00 0.00 42.61 2.73
2919 6831 0.101399 CCGCACTCAGCTAGGTAGTG 59.899 60.000 18.97 18.97 42.80 2.74
2920 6832 0.101399 CGCACTCAGCTAGGTAGTGG 59.899 60.000 21.99 13.88 40.76 4.00
2921 6833 1.475403 GCACTCAGCTAGGTAGTGGA 58.525 55.000 21.99 6.60 40.76 4.02
2922 6834 1.407258 GCACTCAGCTAGGTAGTGGAG 59.593 57.143 21.99 15.28 40.76 3.86
2923 6835 2.028130 CACTCAGCTAGGTAGTGGAGG 58.972 57.143 16.99 3.79 37.55 4.30
2924 6836 1.923850 ACTCAGCTAGGTAGTGGAGGA 59.076 52.381 10.64 0.00 33.14 3.71
2925 6837 2.303175 CTCAGCTAGGTAGTGGAGGAC 58.697 57.143 0.00 0.00 0.00 3.85
2926 6838 1.025812 CAGCTAGGTAGTGGAGGACG 58.974 60.000 0.00 0.00 0.00 4.79
2927 6839 0.752376 AGCTAGGTAGTGGAGGACGC 60.752 60.000 0.00 0.00 0.00 5.19
2928 6840 1.736365 GCTAGGTAGTGGAGGACGCC 61.736 65.000 0.00 0.00 0.00 5.68
2929 6841 1.076485 TAGGTAGTGGAGGACGCCC 60.076 63.158 0.00 0.00 0.00 6.13
2930 6842 2.578586 TAGGTAGTGGAGGACGCCCC 62.579 65.000 0.00 0.00 0.00 5.80
2931 6843 3.468140 GTAGTGGAGGACGCCCCC 61.468 72.222 0.00 0.00 34.66 5.40
2952 6864 2.954346 CGACATCGCGATCGCCAA 60.954 61.111 32.63 21.94 37.98 4.52
2953 6865 2.920964 CGACATCGCGATCGCCAAG 61.921 63.158 32.63 20.88 37.98 3.61
2954 6866 2.586079 ACATCGCGATCGCCAAGG 60.586 61.111 32.63 24.11 37.98 3.61
2955 6867 4.005472 CATCGCGATCGCCAAGGC 62.005 66.667 32.63 6.22 37.98 4.35
2956 6868 4.529219 ATCGCGATCGCCAAGGCA 62.529 61.111 32.63 11.25 42.06 4.75
2959 6871 3.204827 GCGATCGCCAAGGCACAT 61.205 61.111 29.48 1.95 42.06 3.21
2960 6872 3.017323 CGATCGCCAAGGCACATC 58.983 61.111 12.19 10.38 42.06 3.06
2961 6873 2.537560 CGATCGCCAAGGCACATCC 61.538 63.158 12.19 0.00 42.06 3.51
2963 6875 1.153086 ATCGCCAAGGCACATCCTC 60.153 57.895 12.19 0.00 46.94 3.71
2964 6876 1.913951 ATCGCCAAGGCACATCCTCA 61.914 55.000 12.19 0.00 46.94 3.86
2965 6877 1.452651 CGCCAAGGCACATCCTCAT 60.453 57.895 12.19 0.00 46.94 2.90
2966 6878 1.033746 CGCCAAGGCACATCCTCATT 61.034 55.000 12.19 0.00 46.94 2.57
2967 6879 0.743097 GCCAAGGCACATCCTCATTC 59.257 55.000 6.14 0.00 46.94 2.67
2968 6880 1.956636 GCCAAGGCACATCCTCATTCA 60.957 52.381 6.14 0.00 46.94 2.57
2969 6881 1.747355 CCAAGGCACATCCTCATTCAC 59.253 52.381 0.00 0.00 46.94 3.18
2970 6882 1.399440 CAAGGCACATCCTCATTCACG 59.601 52.381 0.00 0.00 46.94 4.35
2971 6883 0.107508 AGGCACATCCTCATTCACGG 60.108 55.000 0.00 0.00 43.20 4.94
2972 6884 0.107703 GGCACATCCTCATTCACGGA 60.108 55.000 0.00 0.00 0.00 4.69
2973 6885 1.009829 GCACATCCTCATTCACGGAC 58.990 55.000 0.00 0.00 30.90 4.79
2974 6886 1.406069 GCACATCCTCATTCACGGACT 60.406 52.381 0.00 0.00 30.90 3.85
2975 6887 2.936993 GCACATCCTCATTCACGGACTT 60.937 50.000 0.00 0.00 30.90 3.01
2976 6888 2.674852 CACATCCTCATTCACGGACTTG 59.325 50.000 0.00 0.00 30.90 3.16
2977 6889 2.303022 ACATCCTCATTCACGGACTTGT 59.697 45.455 0.00 0.00 30.90 3.16
2978 6890 2.743636 TCCTCATTCACGGACTTGTC 57.256 50.000 0.00 0.00 0.00 3.18
2979 6891 1.067846 TCCTCATTCACGGACTTGTCG 60.068 52.381 0.00 0.00 0.00 4.35
2980 6892 0.716108 CTCATTCACGGACTTGTCGC 59.284 55.000 0.00 0.00 0.00 5.19
2981 6893 0.032815 TCATTCACGGACTTGTCGCA 59.967 50.000 0.00 0.00 0.00 5.10
2982 6894 0.163788 CATTCACGGACTTGTCGCAC 59.836 55.000 0.00 0.00 0.00 5.34
2983 6895 0.949105 ATTCACGGACTTGTCGCACC 60.949 55.000 0.00 0.00 0.00 5.01
2984 6896 2.279851 CACGGACTTGTCGCACCA 60.280 61.111 0.00 0.00 0.00 4.17
2985 6897 1.885388 CACGGACTTGTCGCACCAA 60.885 57.895 0.00 0.00 0.00 3.67
2986 6898 1.153329 ACGGACTTGTCGCACCAAA 60.153 52.632 0.00 0.00 0.00 3.28
2987 6899 1.278637 CGGACTTGTCGCACCAAAC 59.721 57.895 0.00 0.00 0.00 2.93
2988 6900 1.278637 GGACTTGTCGCACCAAACG 59.721 57.895 0.00 0.00 0.00 3.60
2989 6901 1.368850 GACTTGTCGCACCAAACGC 60.369 57.895 0.00 0.00 0.00 4.84
2990 6902 2.042520 GACTTGTCGCACCAAACGCA 62.043 55.000 0.00 0.00 0.00 5.24
2991 6903 1.369209 CTTGTCGCACCAAACGCAG 60.369 57.895 0.00 0.00 0.00 5.18
2992 6904 3.462333 TTGTCGCACCAAACGCAGC 62.462 57.895 0.00 0.00 0.00 5.25
2993 6905 3.947841 GTCGCACCAAACGCAGCA 61.948 61.111 0.00 0.00 0.00 4.41
2994 6906 3.947841 TCGCACCAAACGCAGCAC 61.948 61.111 0.00 0.00 0.00 4.40
2995 6907 4.249020 CGCACCAAACGCAGCACA 62.249 61.111 0.00 0.00 0.00 4.57
2996 6908 2.103934 GCACCAAACGCAGCACAA 59.896 55.556 0.00 0.00 0.00 3.33
2997 6909 2.230264 GCACCAAACGCAGCACAAC 61.230 57.895 0.00 0.00 0.00 3.32
2998 6910 1.433064 CACCAAACGCAGCACAACT 59.567 52.632 0.00 0.00 0.00 3.16
3019 6931 2.794941 GAGATCTGCTCGTCGATGC 58.205 57.895 0.00 2.52 33.17 3.91
3020 6932 0.996229 GAGATCTGCTCGTCGATGCG 60.996 60.000 0.00 0.00 33.17 4.73
3021 6933 2.013483 GATCTGCTCGTCGATGCGG 61.013 63.158 15.26 15.26 36.94 5.69
3022 6934 3.490793 ATCTGCTCGTCGATGCGGG 62.491 63.158 18.93 4.28 36.33 6.13
3026 6938 4.246206 CTCGTCGATGCGGGCGTA 62.246 66.667 0.00 0.00 0.00 4.42
3027 6939 3.538028 CTCGTCGATGCGGGCGTAT 62.538 63.158 0.00 0.00 0.00 3.06
3028 6940 3.097728 CGTCGATGCGGGCGTATC 61.098 66.667 0.00 0.00 34.58 2.24
3029 6941 2.027024 GTCGATGCGGGCGTATCA 59.973 61.111 0.00 0.00 37.12 2.15
3030 6942 2.016704 GTCGATGCGGGCGTATCAG 61.017 63.158 0.00 0.00 37.12 2.90
3031 6943 3.406361 CGATGCGGGCGTATCAGC 61.406 66.667 0.00 0.00 37.12 4.26
3057 6969 4.809070 AGTGGCAACTGAGAAGGC 57.191 55.556 0.00 0.00 34.48 4.35
3058 6970 2.149530 AGTGGCAACTGAGAAGGCT 58.850 52.632 0.00 0.00 34.48 4.58
3059 6971 1.352083 AGTGGCAACTGAGAAGGCTA 58.648 50.000 0.00 0.00 34.48 3.93
3060 6972 1.002544 AGTGGCAACTGAGAAGGCTAC 59.997 52.381 0.00 0.00 37.92 3.58
3061 6973 1.002544 GTGGCAACTGAGAAGGCTACT 59.997 52.381 0.00 0.00 35.24 2.57
3062 6974 1.699634 TGGCAACTGAGAAGGCTACTT 59.300 47.619 0.00 0.00 37.22 2.24
3063 6975 2.289694 TGGCAACTGAGAAGGCTACTTC 60.290 50.000 0.00 0.00 45.49 3.01
3069 6981 4.089983 GAAGGCTACTTCGACCGC 57.910 61.111 0.00 0.00 43.25 5.68
3070 6982 1.511768 GAAGGCTACTTCGACCGCT 59.488 57.895 0.00 0.00 43.25 5.52
3071 6983 0.737219 GAAGGCTACTTCGACCGCTA 59.263 55.000 0.00 0.00 43.25 4.26
3072 6984 0.455005 AAGGCTACTTCGACCGCTAC 59.545 55.000 0.00 0.00 28.54 3.58
3073 6985 1.298190 GGCTACTTCGACCGCTACG 60.298 63.158 0.00 0.00 0.00 3.51
3074 6986 1.938329 GCTACTTCGACCGCTACGC 60.938 63.158 0.00 0.00 0.00 4.42
3075 6987 1.298190 CTACTTCGACCGCTACGCC 60.298 63.158 0.00 0.00 0.00 5.68
3076 6988 2.961526 CTACTTCGACCGCTACGCCG 62.962 65.000 0.00 0.00 0.00 6.46
3081 6993 3.925238 GACCGCTACGCCGCATTG 61.925 66.667 0.00 0.00 0.00 2.82
3082 6994 4.444838 ACCGCTACGCCGCATTGA 62.445 61.111 0.00 0.00 0.00 2.57
3083 6995 3.192230 CCGCTACGCCGCATTGAA 61.192 61.111 0.00 0.00 0.00 2.69
3084 6996 2.321060 CGCTACGCCGCATTGAAG 59.679 61.111 0.00 0.00 0.00 3.02
3085 6997 2.023320 GCTACGCCGCATTGAAGC 59.977 61.111 0.00 0.00 0.00 3.86
3093 7005 2.099062 GCATTGAAGCGGCGTCTG 59.901 61.111 16.51 8.81 0.00 3.51
3094 7006 2.680913 GCATTGAAGCGGCGTCTGT 61.681 57.895 16.51 3.03 0.00 3.41
3095 7007 1.421485 CATTGAAGCGGCGTCTGTC 59.579 57.895 16.51 7.47 0.00 3.51
3096 7008 1.741770 ATTGAAGCGGCGTCTGTCC 60.742 57.895 16.51 0.90 0.00 4.02
3105 7017 4.056125 CGTCTGTCCGCCTGCTCA 62.056 66.667 0.00 0.00 0.00 4.26
3106 7018 2.433318 GTCTGTCCGCCTGCTCAC 60.433 66.667 0.00 0.00 0.00 3.51
3107 7019 4.056125 TCTGTCCGCCTGCTCACG 62.056 66.667 0.00 0.00 0.00 4.35
3110 7022 4.129737 GTCCGCCTGCTCACGCTA 62.130 66.667 0.00 0.00 36.97 4.26
3111 7023 3.147595 TCCGCCTGCTCACGCTAT 61.148 61.111 0.00 0.00 36.97 2.97
3112 7024 2.202932 CCGCCTGCTCACGCTATT 60.203 61.111 0.00 0.00 36.97 1.73
3113 7025 1.815421 CCGCCTGCTCACGCTATTT 60.815 57.895 0.00 0.00 36.97 1.40
3114 7026 1.369091 CCGCCTGCTCACGCTATTTT 61.369 55.000 0.00 0.00 36.97 1.82
3115 7027 1.286501 CGCCTGCTCACGCTATTTTA 58.713 50.000 0.00 0.00 36.97 1.52
3116 7028 1.663643 CGCCTGCTCACGCTATTTTAA 59.336 47.619 0.00 0.00 36.97 1.52
3117 7029 2.285834 CGCCTGCTCACGCTATTTTAAG 60.286 50.000 0.00 0.00 36.97 1.85
3118 7030 2.539750 GCCTGCTCACGCTATTTTAAGC 60.540 50.000 0.00 0.00 39.21 3.09
3119 7031 2.677836 CCTGCTCACGCTATTTTAAGCA 59.322 45.455 0.00 0.00 42.91 3.91
3121 7033 2.677836 TGCTCACGCTATTTTAAGCAGG 59.322 45.455 0.00 0.00 42.91 4.85
3122 7034 2.032178 GCTCACGCTATTTTAAGCAGGG 59.968 50.000 0.00 0.00 42.91 4.45
3123 7035 3.270877 CTCACGCTATTTTAAGCAGGGT 58.729 45.455 0.00 0.00 42.91 4.34
3124 7036 3.681593 TCACGCTATTTTAAGCAGGGTT 58.318 40.909 0.00 0.00 42.91 4.11
3125 7037 3.687698 TCACGCTATTTTAAGCAGGGTTC 59.312 43.478 0.00 0.00 42.91 3.62
3126 7038 3.689649 CACGCTATTTTAAGCAGGGTTCT 59.310 43.478 0.00 0.00 42.91 3.01
3127 7039 4.156008 CACGCTATTTTAAGCAGGGTTCTT 59.844 41.667 0.00 0.00 42.91 2.52
3128 7040 4.156008 ACGCTATTTTAAGCAGGGTTCTTG 59.844 41.667 0.00 0.00 42.91 3.02
3129 7041 4.424626 GCTATTTTAAGCAGGGTTCTTGC 58.575 43.478 0.00 0.00 42.30 4.01
3130 7042 3.575965 ATTTTAAGCAGGGTTCTTGCG 57.424 42.857 0.00 0.00 0.00 4.85
3131 7043 1.975660 TTTAAGCAGGGTTCTTGCGT 58.024 45.000 0.00 0.00 0.00 5.24
3132 7044 1.519408 TTAAGCAGGGTTCTTGCGTC 58.481 50.000 0.00 0.00 0.00 5.19
3133 7045 0.669318 TAAGCAGGGTTCTTGCGTCG 60.669 55.000 0.00 0.00 0.00 5.12
3134 7046 3.423154 GCAGGGTTCTTGCGTCGG 61.423 66.667 0.00 0.00 0.00 4.79
3135 7047 3.423154 CAGGGTTCTTGCGTCGGC 61.423 66.667 0.00 0.00 40.52 5.54
3136 7048 4.699522 AGGGTTCTTGCGTCGGCC 62.700 66.667 0.00 0.00 38.85 6.13
3138 7050 2.975799 GGTTCTTGCGTCGGCCAA 60.976 61.111 2.24 0.00 38.85 4.52
3139 7051 2.251371 GTTCTTGCGTCGGCCAAC 59.749 61.111 2.24 0.00 38.85 3.77
3140 7052 2.975799 TTCTTGCGTCGGCCAACC 60.976 61.111 2.24 0.00 38.85 3.77
3145 7057 4.476752 GCGTCGGCCAACCCCATA 62.477 66.667 2.24 0.00 0.00 2.74
3146 7058 2.508928 CGTCGGCCAACCCCATAT 59.491 61.111 2.24 0.00 0.00 1.78
3147 7059 1.597027 CGTCGGCCAACCCCATATC 60.597 63.158 2.24 0.00 0.00 1.63
3148 7060 1.228154 GTCGGCCAACCCCATATCC 60.228 63.158 2.24 0.00 0.00 2.59
3149 7061 1.385347 TCGGCCAACCCCATATCCT 60.385 57.895 2.24 0.00 0.00 3.24
3150 7062 1.073199 CGGCCAACCCCATATCCTC 59.927 63.158 2.24 0.00 0.00 3.71
3151 7063 1.418908 CGGCCAACCCCATATCCTCT 61.419 60.000 2.24 0.00 0.00 3.69
3152 7064 0.402121 GGCCAACCCCATATCCTCTC 59.598 60.000 0.00 0.00 0.00 3.20
3153 7065 0.402121 GCCAACCCCATATCCTCTCC 59.598 60.000 0.00 0.00 0.00 3.71
3154 7066 2.047742 GCCAACCCCATATCCTCTCCT 61.048 57.143 0.00 0.00 0.00 3.69
3155 7067 1.981495 CCAACCCCATATCCTCTCCTC 59.019 57.143 0.00 0.00 0.00 3.71
3156 7068 2.428484 CCAACCCCATATCCTCTCCTCT 60.428 54.545 0.00 0.00 0.00 3.69
3157 7069 2.903135 CAACCCCATATCCTCTCCTCTC 59.097 54.545 0.00 0.00 0.00 3.20
3158 7070 2.448708 ACCCCATATCCTCTCCTCTCT 58.551 52.381 0.00 0.00 0.00 3.10
3159 7071 2.111613 ACCCCATATCCTCTCCTCTCTG 59.888 54.545 0.00 0.00 0.00 3.35
3160 7072 2.178580 CCCATATCCTCTCCTCTCTGC 58.821 57.143 0.00 0.00 0.00 4.26
3161 7073 2.492381 CCCATATCCTCTCCTCTCTGCA 60.492 54.545 0.00 0.00 0.00 4.41
3162 7074 2.562298 CCATATCCTCTCCTCTCTGCAC 59.438 54.545 0.00 0.00 0.00 4.57
3163 7075 3.229293 CATATCCTCTCCTCTCTGCACA 58.771 50.000 0.00 0.00 0.00 4.57
3164 7076 1.484038 ATCCTCTCCTCTCTGCACAC 58.516 55.000 0.00 0.00 0.00 3.82
3165 7077 0.613292 TCCTCTCCTCTCTGCACACC 60.613 60.000 0.00 0.00 0.00 4.16
3166 7078 1.612395 CCTCTCCTCTCTGCACACCC 61.612 65.000 0.00 0.00 0.00 4.61
3167 7079 0.614415 CTCTCCTCTCTGCACACCCT 60.614 60.000 0.00 0.00 0.00 4.34
3168 7080 0.613292 TCTCCTCTCTGCACACCCTC 60.613 60.000 0.00 0.00 0.00 4.30
3169 7081 0.614415 CTCCTCTCTGCACACCCTCT 60.614 60.000 0.00 0.00 0.00 3.69
3170 7082 0.613292 TCCTCTCTGCACACCCTCTC 60.613 60.000 0.00 0.00 0.00 3.20
3171 7083 0.614415 CCTCTCTGCACACCCTCTCT 60.614 60.000 0.00 0.00 0.00 3.10
3172 7084 0.531657 CTCTCTGCACACCCTCTCTG 59.468 60.000 0.00 0.00 0.00 3.35
3173 7085 0.178950 TCTCTGCACACCCTCTCTGT 60.179 55.000 0.00 0.00 0.00 3.41
3174 7086 0.037512 CTCTGCACACCCTCTCTGTG 60.038 60.000 0.00 0.00 41.76 3.66
3175 7087 0.469892 TCTGCACACCCTCTCTGTGA 60.470 55.000 2.73 0.00 41.43 3.58
3176 7088 0.612229 CTGCACACCCTCTCTGTGAT 59.388 55.000 2.73 0.00 41.43 3.06
3177 7089 0.610174 TGCACACCCTCTCTGTGATC 59.390 55.000 2.73 0.00 41.43 2.92
3178 7090 0.901124 GCACACCCTCTCTGTGATCT 59.099 55.000 2.73 0.00 41.43 2.75
3179 7091 1.405256 GCACACCCTCTCTGTGATCTG 60.405 57.143 2.73 0.00 41.43 2.90
3180 7092 2.174360 CACACCCTCTCTGTGATCTGA 58.826 52.381 0.00 0.00 41.43 3.27
3181 7093 2.765135 CACACCCTCTCTGTGATCTGAT 59.235 50.000 0.00 0.00 41.43 2.90
3182 7094 3.030291 ACACCCTCTCTGTGATCTGATC 58.970 50.000 10.72 10.72 37.18 2.92
3183 7095 2.364970 CACCCTCTCTGTGATCTGATCC 59.635 54.545 14.71 7.10 35.74 3.36
3184 7096 1.612950 CCCTCTCTGTGATCTGATCCG 59.387 57.143 14.71 4.16 0.00 4.18
3185 7097 2.580962 CCTCTCTGTGATCTGATCCGA 58.419 52.381 14.71 7.91 0.00 4.55
3186 7098 3.156293 CCTCTCTGTGATCTGATCCGAT 58.844 50.000 14.71 0.00 0.00 4.18
3187 7099 3.191162 CCTCTCTGTGATCTGATCCGATC 59.809 52.174 17.56 17.56 40.13 3.69
3188 7100 3.153130 TCTCTGTGATCTGATCCGATCC 58.847 50.000 20.48 13.73 39.20 3.36
3189 7101 3.156293 CTCTGTGATCTGATCCGATCCT 58.844 50.000 20.48 0.00 39.20 3.24
3190 7102 3.153130 TCTGTGATCTGATCCGATCCTC 58.847 50.000 20.48 14.89 39.20 3.71
3191 7103 3.156293 CTGTGATCTGATCCGATCCTCT 58.844 50.000 20.48 0.00 39.20 3.69
3192 7104 3.153130 TGTGATCTGATCCGATCCTCTC 58.847 50.000 20.48 11.12 39.20 3.20
3193 7105 3.153130 GTGATCTGATCCGATCCTCTCA 58.847 50.000 20.48 4.38 39.20 3.27
3194 7106 3.763360 GTGATCTGATCCGATCCTCTCAT 59.237 47.826 20.48 0.00 39.20 2.90
3195 7107 3.762823 TGATCTGATCCGATCCTCTCATG 59.237 47.826 20.48 0.00 39.20 3.07
3196 7108 1.891811 TCTGATCCGATCCTCTCATGC 59.108 52.381 5.91 0.00 0.00 4.06
3197 7109 0.600057 TGATCCGATCCTCTCATGCG 59.400 55.000 5.91 0.00 0.00 4.73
3198 7110 0.600557 GATCCGATCCTCTCATGCGT 59.399 55.000 0.00 0.00 0.00 5.24
3199 7111 0.600557 ATCCGATCCTCTCATGCGTC 59.399 55.000 0.00 0.00 0.00 5.19
3200 7112 1.371022 CCGATCCTCTCATGCGTCG 60.371 63.158 0.00 0.00 0.00 5.12
3201 7113 2.013483 CGATCCTCTCATGCGTCGC 61.013 63.158 11.10 11.10 0.00 5.19
3202 7114 1.361993 GATCCTCTCATGCGTCGCT 59.638 57.895 19.50 0.71 0.00 4.93
3203 7115 0.593618 GATCCTCTCATGCGTCGCTA 59.406 55.000 19.50 5.27 0.00 4.26
3204 7116 0.312416 ATCCTCTCATGCGTCGCTAC 59.688 55.000 19.50 0.00 0.00 3.58
3205 7117 0.748367 TCCTCTCATGCGTCGCTACT 60.748 55.000 19.50 0.00 0.00 2.57
3206 7118 0.593518 CCTCTCATGCGTCGCTACTG 60.594 60.000 19.50 12.93 0.00 2.74
3207 7119 0.099613 CTCTCATGCGTCGCTACTGT 59.900 55.000 19.50 0.00 0.00 3.55
3208 7120 1.330829 CTCTCATGCGTCGCTACTGTA 59.669 52.381 19.50 0.00 0.00 2.74
3209 7121 1.741145 TCTCATGCGTCGCTACTGTAA 59.259 47.619 19.50 0.00 0.00 2.41
3210 7122 1.846782 CTCATGCGTCGCTACTGTAAC 59.153 52.381 19.50 0.00 0.00 2.50
3211 7123 1.200484 TCATGCGTCGCTACTGTAACA 59.800 47.619 19.50 0.00 0.00 2.41
3212 7124 2.159296 TCATGCGTCGCTACTGTAACAT 60.159 45.455 19.50 0.00 0.00 2.71
3213 7125 1.904144 TGCGTCGCTACTGTAACATC 58.096 50.000 19.50 0.00 0.00 3.06
3214 7126 1.197910 GCGTCGCTACTGTAACATCC 58.802 55.000 10.68 0.00 0.00 3.51
3215 7127 1.202268 GCGTCGCTACTGTAACATCCT 60.202 52.381 10.68 0.00 0.00 3.24
3216 7128 2.451132 CGTCGCTACTGTAACATCCTG 58.549 52.381 0.00 0.00 0.00 3.86
3217 7129 2.794981 CGTCGCTACTGTAACATCCTGG 60.795 54.545 0.00 0.00 0.00 4.45
3218 7130 2.426024 GTCGCTACTGTAACATCCTGGA 59.574 50.000 0.00 0.00 0.00 3.86
3219 7131 3.068307 GTCGCTACTGTAACATCCTGGAT 59.932 47.826 2.57 2.57 0.00 3.41
3220 7132 3.704566 TCGCTACTGTAACATCCTGGATT 59.295 43.478 6.42 0.00 0.00 3.01
3221 7133 4.161565 TCGCTACTGTAACATCCTGGATTT 59.838 41.667 6.42 7.74 0.00 2.17
3222 7134 4.876107 CGCTACTGTAACATCCTGGATTTT 59.124 41.667 6.42 9.93 0.00 1.82
3223 7135 5.220662 CGCTACTGTAACATCCTGGATTTTG 60.221 44.000 16.43 6.31 0.00 2.44
3224 7136 5.449177 GCTACTGTAACATCCTGGATTTTGC 60.449 44.000 16.43 15.39 0.00 3.68
3225 7137 3.763897 ACTGTAACATCCTGGATTTTGCC 59.236 43.478 16.43 8.61 0.00 4.52
3226 7138 3.096092 TGTAACATCCTGGATTTTGCCC 58.904 45.455 16.43 6.57 0.00 5.36
3227 7139 2.629017 AACATCCTGGATTTTGCCCT 57.371 45.000 6.42 0.00 0.00 5.19
3228 7140 2.629017 ACATCCTGGATTTTGCCCTT 57.371 45.000 6.42 0.00 0.00 3.95
3229 7141 2.906568 ACATCCTGGATTTTGCCCTTT 58.093 42.857 6.42 0.00 0.00 3.11
3230 7142 3.250617 ACATCCTGGATTTTGCCCTTTT 58.749 40.909 6.42 0.00 0.00 2.27
3231 7143 3.652387 ACATCCTGGATTTTGCCCTTTTT 59.348 39.130 6.42 0.00 0.00 1.94
3232 7144 4.256110 CATCCTGGATTTTGCCCTTTTTC 58.744 43.478 6.42 0.00 0.00 2.29
3233 7145 3.586429 TCCTGGATTTTGCCCTTTTTCT 58.414 40.909 0.00 0.00 0.00 2.52
3234 7146 3.324556 TCCTGGATTTTGCCCTTTTTCTG 59.675 43.478 0.00 0.00 0.00 3.02
3235 7147 3.324556 CCTGGATTTTGCCCTTTTTCTGA 59.675 43.478 0.00 0.00 0.00 3.27
3236 7148 4.019950 CCTGGATTTTGCCCTTTTTCTGAT 60.020 41.667 0.00 0.00 0.00 2.90
3237 7149 4.897140 TGGATTTTGCCCTTTTTCTGATG 58.103 39.130 0.00 0.00 0.00 3.07
3238 7150 4.592351 TGGATTTTGCCCTTTTTCTGATGA 59.408 37.500 0.00 0.00 0.00 2.92
3239 7151 5.248934 TGGATTTTGCCCTTTTTCTGATGAT 59.751 36.000 0.00 0.00 0.00 2.45
3240 7152 6.175471 GGATTTTGCCCTTTTTCTGATGATT 58.825 36.000 0.00 0.00 0.00 2.57
3241 7153 6.656270 GGATTTTGCCCTTTTTCTGATGATTT 59.344 34.615 0.00 0.00 0.00 2.17
3242 7154 7.175467 GGATTTTGCCCTTTTTCTGATGATTTT 59.825 33.333 0.00 0.00 0.00 1.82
3243 7155 7.495135 TTTTGCCCTTTTTCTGATGATTTTC 57.505 32.000 0.00 0.00 0.00 2.29
3244 7156 5.151297 TGCCCTTTTTCTGATGATTTTCC 57.849 39.130 0.00 0.00 0.00 3.13
3245 7157 4.840115 TGCCCTTTTTCTGATGATTTTCCT 59.160 37.500 0.00 0.00 0.00 3.36
3246 7158 5.173664 GCCCTTTTTCTGATGATTTTCCTG 58.826 41.667 0.00 0.00 0.00 3.86
3247 7159 5.727434 CCCTTTTTCTGATGATTTTCCTGG 58.273 41.667 0.00 0.00 0.00 4.45
3248 7160 5.481473 CCCTTTTTCTGATGATTTTCCTGGA 59.519 40.000 0.00 0.00 0.00 3.86
3249 7161 6.155737 CCCTTTTTCTGATGATTTTCCTGGAT 59.844 38.462 0.00 0.00 0.00 3.41
3250 7162 7.310858 CCCTTTTTCTGATGATTTTCCTGGATT 60.311 37.037 0.00 0.00 0.00 3.01
3251 7163 8.098912 CCTTTTTCTGATGATTTTCCTGGATTT 58.901 33.333 0.00 0.00 0.00 2.17
3252 7164 9.148104 CTTTTTCTGATGATTTTCCTGGATTTC 57.852 33.333 0.00 0.00 0.00 2.17
3253 7165 8.426569 TTTTCTGATGATTTTCCTGGATTTCT 57.573 30.769 0.00 0.00 0.00 2.52
3254 7166 8.426569 TTTCTGATGATTTTCCTGGATTTCTT 57.573 30.769 0.00 0.00 0.00 2.52
3255 7167 7.400599 TCTGATGATTTTCCTGGATTTCTTG 57.599 36.000 0.00 0.00 0.00 3.02
3256 7168 7.177184 TCTGATGATTTTCCTGGATTTCTTGA 58.823 34.615 0.00 0.00 0.00 3.02
3257 7169 7.837689 TCTGATGATTTTCCTGGATTTCTTGAT 59.162 33.333 0.00 0.00 0.00 2.57
3258 7170 8.370266 TGATGATTTTCCTGGATTTCTTGATT 57.630 30.769 0.00 0.00 0.00 2.57
3259 7171 8.818860 TGATGATTTTCCTGGATTTCTTGATTT 58.181 29.630 0.00 0.00 0.00 2.17
3260 7172 9.095065 GATGATTTTCCTGGATTTCTTGATTTG 57.905 33.333 0.00 0.00 0.00 2.32
3261 7173 8.192743 TGATTTTCCTGGATTTCTTGATTTGA 57.807 30.769 0.00 0.00 0.00 2.69
3262 7174 8.649591 TGATTTTCCTGGATTTCTTGATTTGAA 58.350 29.630 0.00 0.00 0.00 2.69
3263 7175 9.662947 GATTTTCCTGGATTTCTTGATTTGAAT 57.337 29.630 0.00 0.00 0.00 2.57
3265 7177 8.836268 TTTCCTGGATTTCTTGATTTGAATTG 57.164 30.769 0.00 0.00 0.00 2.32
3266 7178 7.543359 TCCTGGATTTCTTGATTTGAATTGT 57.457 32.000 0.00 0.00 0.00 2.71
3267 7179 7.965718 TCCTGGATTTCTTGATTTGAATTGTT 58.034 30.769 0.00 0.00 0.00 2.83
3268 7180 8.431222 TCCTGGATTTCTTGATTTGAATTGTTT 58.569 29.630 0.00 0.00 0.00 2.83
3269 7181 9.059260 CCTGGATTTCTTGATTTGAATTGTTTT 57.941 29.630 0.00 0.00 0.00 2.43
3272 7184 9.882996 GGATTTCTTGATTTGAATTGTTTTTCC 57.117 29.630 0.00 0.00 0.00 3.13
3273 7185 9.584839 GATTTCTTGATTTGAATTGTTTTTCCG 57.415 29.630 0.00 0.00 0.00 4.30
3274 7186 8.485976 TTTCTTGATTTGAATTGTTTTTCCGT 57.514 26.923 0.00 0.00 0.00 4.69
3275 7187 7.462109 TCTTGATTTGAATTGTTTTTCCGTG 57.538 32.000 0.00 0.00 0.00 4.94
3276 7188 6.478344 TCTTGATTTGAATTGTTTTTCCGTGG 59.522 34.615 0.00 0.00 0.00 4.94
3277 7189 4.509600 TGATTTGAATTGTTTTTCCGTGGC 59.490 37.500 0.00 0.00 0.00 5.01
3278 7190 3.810310 TTGAATTGTTTTTCCGTGGCT 57.190 38.095 0.00 0.00 0.00 4.75
3279 7191 4.920640 TTGAATTGTTTTTCCGTGGCTA 57.079 36.364 0.00 0.00 0.00 3.93
3280 7192 5.461032 TTGAATTGTTTTTCCGTGGCTAT 57.539 34.783 0.00 0.00 0.00 2.97
3281 7193 4.804108 TGAATTGTTTTTCCGTGGCTATG 58.196 39.130 0.00 0.00 0.00 2.23
3282 7194 4.279671 TGAATTGTTTTTCCGTGGCTATGT 59.720 37.500 0.00 0.00 0.00 2.29
3283 7195 3.634568 TTGTTTTTCCGTGGCTATGTG 57.365 42.857 0.00 0.00 0.00 3.21
3284 7196 1.883275 TGTTTTTCCGTGGCTATGTGG 59.117 47.619 0.00 0.00 0.00 4.17
3285 7197 1.883926 GTTTTTCCGTGGCTATGTGGT 59.116 47.619 0.00 0.00 0.00 4.16
3286 7198 2.279935 TTTTCCGTGGCTATGTGGTT 57.720 45.000 0.00 0.00 0.00 3.67
3287 7199 2.279935 TTTCCGTGGCTATGTGGTTT 57.720 45.000 0.00 0.00 0.00 3.27
3288 7200 2.279935 TTCCGTGGCTATGTGGTTTT 57.720 45.000 0.00 0.00 0.00 2.43
3289 7201 1.529226 TCCGTGGCTATGTGGTTTTG 58.471 50.000 0.00 0.00 0.00 2.44
3290 7202 1.072489 TCCGTGGCTATGTGGTTTTGA 59.928 47.619 0.00 0.00 0.00 2.69
3291 7203 1.883275 CCGTGGCTATGTGGTTTTGAA 59.117 47.619 0.00 0.00 0.00 2.69
3292 7204 2.294791 CCGTGGCTATGTGGTTTTGAAA 59.705 45.455 0.00 0.00 0.00 2.69
3293 7205 3.305110 CGTGGCTATGTGGTTTTGAAAC 58.695 45.455 0.00 0.00 38.17 2.78
3294 7206 3.004315 CGTGGCTATGTGGTTTTGAAACT 59.996 43.478 6.57 0.00 38.89 2.66
3295 7207 4.499019 CGTGGCTATGTGGTTTTGAAACTT 60.499 41.667 6.57 0.00 38.89 2.66
3296 7208 4.744631 GTGGCTATGTGGTTTTGAAACTTG 59.255 41.667 6.57 0.00 38.89 3.16
3297 7209 4.202202 TGGCTATGTGGTTTTGAAACTTGG 60.202 41.667 6.57 0.00 38.89 3.61
3298 7210 4.306600 GCTATGTGGTTTTGAAACTTGGG 58.693 43.478 6.57 0.00 38.89 4.12
3299 7211 4.038642 GCTATGTGGTTTTGAAACTTGGGA 59.961 41.667 6.57 0.00 38.89 4.37
3300 7212 5.452636 GCTATGTGGTTTTGAAACTTGGGAA 60.453 40.000 6.57 0.00 38.89 3.97
3301 7213 4.464069 TGTGGTTTTGAAACTTGGGAAG 57.536 40.909 6.57 0.00 38.89 3.46
3302 7214 4.090090 TGTGGTTTTGAAACTTGGGAAGA 58.910 39.130 6.57 0.00 38.89 2.87
3303 7215 4.714308 TGTGGTTTTGAAACTTGGGAAGAT 59.286 37.500 6.57 0.00 38.89 2.40
3304 7216 5.163457 TGTGGTTTTGAAACTTGGGAAGATC 60.163 40.000 6.57 0.00 38.89 2.75
3305 7217 4.959210 TGGTTTTGAAACTTGGGAAGATCA 59.041 37.500 6.57 0.00 38.89 2.92
3306 7218 5.602145 TGGTTTTGAAACTTGGGAAGATCAT 59.398 36.000 6.57 0.00 38.89 2.45
3307 7219 5.928264 GGTTTTGAAACTTGGGAAGATCATG 59.072 40.000 6.57 0.00 38.89 3.07
3308 7220 6.462909 GGTTTTGAAACTTGGGAAGATCATGT 60.463 38.462 6.57 0.00 38.89 3.21
3309 7221 5.964958 TTGAAACTTGGGAAGATCATGTC 57.035 39.130 0.00 0.00 31.60 3.06
3310 7222 5.246981 TGAAACTTGGGAAGATCATGTCT 57.753 39.130 0.00 0.00 39.43 3.41
3328 7240 9.838339 ATCATGTCTTTCTAGGTTTTATAGTGG 57.162 33.333 0.00 0.00 0.00 4.00
3329 7241 7.769044 TCATGTCTTTCTAGGTTTTATAGTGGC 59.231 37.037 0.00 0.00 0.00 5.01
3330 7242 7.253905 TGTCTTTCTAGGTTTTATAGTGGCT 57.746 36.000 0.00 0.00 0.00 4.75
3331 7243 7.686434 TGTCTTTCTAGGTTTTATAGTGGCTT 58.314 34.615 0.00 0.00 0.00 4.35
3332 7244 7.606456 TGTCTTTCTAGGTTTTATAGTGGCTTG 59.394 37.037 0.00 0.00 0.00 4.01
3333 7245 6.598064 TCTTTCTAGGTTTTATAGTGGCTTGC 59.402 38.462 0.00 0.00 0.00 4.01
3334 7246 4.777463 TCTAGGTTTTATAGTGGCTTGCC 58.223 43.478 4.43 4.43 0.00 4.52
3335 7247 3.449746 AGGTTTTATAGTGGCTTGCCA 57.550 42.857 10.65 10.65 0.00 4.92
3336 7248 3.981212 AGGTTTTATAGTGGCTTGCCAT 58.019 40.909 17.86 9.27 0.00 4.40
3337 7249 3.954258 AGGTTTTATAGTGGCTTGCCATC 59.046 43.478 17.86 11.13 0.00 3.51
3338 7250 3.068165 GGTTTTATAGTGGCTTGCCATCC 59.932 47.826 17.86 5.90 0.00 3.51
3339 7251 3.951563 TTTATAGTGGCTTGCCATCCT 57.048 42.857 17.86 12.99 0.00 3.24
3340 7252 3.492102 TTATAGTGGCTTGCCATCCTC 57.508 47.619 17.86 4.79 0.00 3.71
3341 7253 1.216064 ATAGTGGCTTGCCATCCTCA 58.784 50.000 17.86 2.32 0.00 3.86
3342 7254 1.216064 TAGTGGCTTGCCATCCTCAT 58.784 50.000 17.86 3.23 0.00 2.90
3343 7255 0.106819 AGTGGCTTGCCATCCTCATC 60.107 55.000 17.86 2.96 0.00 2.92
3344 7256 0.394762 GTGGCTTGCCATCCTCATCA 60.395 55.000 17.86 0.00 0.00 3.07
3345 7257 0.554305 TGGCTTGCCATCCTCATCAT 59.446 50.000 10.65 0.00 0.00 2.45
3346 7258 1.245732 GGCTTGCCATCCTCATCATC 58.754 55.000 6.79 0.00 0.00 2.92
3347 7259 1.478105 GGCTTGCCATCCTCATCATCA 60.478 52.381 6.79 0.00 0.00 3.07
3348 7260 2.515854 GCTTGCCATCCTCATCATCAT 58.484 47.619 0.00 0.00 0.00 2.45
3349 7261 2.488545 GCTTGCCATCCTCATCATCATC 59.511 50.000 0.00 0.00 0.00 2.92
3350 7262 2.873094 TGCCATCCTCATCATCATCC 57.127 50.000 0.00 0.00 0.00 3.51
3351 7263 1.353358 TGCCATCCTCATCATCATCCC 59.647 52.381 0.00 0.00 0.00 3.85
3352 7264 1.353358 GCCATCCTCATCATCATCCCA 59.647 52.381 0.00 0.00 0.00 4.37
3353 7265 2.224942 GCCATCCTCATCATCATCCCAA 60.225 50.000 0.00 0.00 0.00 4.12
3354 7266 3.687125 CCATCCTCATCATCATCCCAAG 58.313 50.000 0.00 0.00 0.00 3.61
3355 7267 3.329814 CCATCCTCATCATCATCCCAAGA 59.670 47.826 0.00 0.00 0.00 3.02
3356 7268 4.018324 CCATCCTCATCATCATCCCAAGAT 60.018 45.833 0.00 0.00 0.00 2.40
3357 7269 4.904895 TCCTCATCATCATCCCAAGATC 57.095 45.455 0.00 0.00 0.00 2.75
3358 7270 4.237018 TCCTCATCATCATCCCAAGATCA 58.763 43.478 0.00 0.00 0.00 2.92
3359 7271 4.850386 TCCTCATCATCATCCCAAGATCAT 59.150 41.667 0.00 0.00 0.00 2.45
3360 7272 4.944317 CCTCATCATCATCCCAAGATCATG 59.056 45.833 0.00 0.00 32.55 3.07
3361 7273 5.515008 CCTCATCATCATCCCAAGATCATGT 60.515 44.000 0.00 0.00 33.05 3.21
3362 7274 5.557866 TCATCATCATCCCAAGATCATGTC 58.442 41.667 0.00 0.00 33.05 3.06
3363 7275 5.072600 TCATCATCATCCCAAGATCATGTCA 59.927 40.000 0.00 0.00 33.05 3.58
3364 7276 5.578157 TCATCATCCCAAGATCATGTCAT 57.422 39.130 0.00 0.00 33.05 3.06
3365 7277 5.948842 TCATCATCCCAAGATCATGTCATT 58.051 37.500 0.00 0.00 33.05 2.57
3366 7278 6.370453 TCATCATCCCAAGATCATGTCATTT 58.630 36.000 0.00 0.00 33.05 2.32
3367 7279 6.837048 TCATCATCCCAAGATCATGTCATTTT 59.163 34.615 0.00 0.00 33.05 1.82
3368 7280 6.704289 TCATCCCAAGATCATGTCATTTTC 57.296 37.500 0.00 0.00 0.00 2.29
3369 7281 6.189133 TCATCCCAAGATCATGTCATTTTCA 58.811 36.000 0.00 0.00 0.00 2.69
3370 7282 6.837048 TCATCCCAAGATCATGTCATTTTCAT 59.163 34.615 0.00 0.00 0.00 2.57
3371 7283 6.704289 TCCCAAGATCATGTCATTTTCATC 57.296 37.500 0.00 0.00 0.00 2.92
3372 7284 5.595542 TCCCAAGATCATGTCATTTTCATCC 59.404 40.000 0.00 0.00 0.00 3.51
3373 7285 5.597182 CCCAAGATCATGTCATTTTCATCCT 59.403 40.000 0.00 0.00 0.00 3.24
3374 7286 6.097839 CCCAAGATCATGTCATTTTCATCCTT 59.902 38.462 0.00 0.00 0.00 3.36
3375 7287 6.978659 CCAAGATCATGTCATTTTCATCCTTG 59.021 38.462 0.00 0.00 31.68 3.61
3376 7288 7.147966 CCAAGATCATGTCATTTTCATCCTTGA 60.148 37.037 0.00 0.00 32.51 3.02
3377 7289 7.330900 AGATCATGTCATTTTCATCCTTGAC 57.669 36.000 0.00 0.00 39.11 3.18
3378 7290 5.902613 TCATGTCATTTTCATCCTTGACC 57.097 39.130 0.00 0.00 38.12 4.02
3379 7291 5.573219 TCATGTCATTTTCATCCTTGACCT 58.427 37.500 0.00 0.00 38.12 3.85
3380 7292 6.720309 TCATGTCATTTTCATCCTTGACCTA 58.280 36.000 0.00 0.00 38.12 3.08
3381 7293 7.174413 TCATGTCATTTTCATCCTTGACCTAA 58.826 34.615 0.00 0.00 38.12 2.69
3382 7294 7.835682 TCATGTCATTTTCATCCTTGACCTAAT 59.164 33.333 0.00 0.00 38.12 1.73
3383 7295 7.630242 TGTCATTTTCATCCTTGACCTAATC 57.370 36.000 0.00 0.00 38.12 1.75
3384 7296 6.603201 TGTCATTTTCATCCTTGACCTAATCC 59.397 38.462 0.00 0.00 38.12 3.01
3385 7297 6.603201 GTCATTTTCATCCTTGACCTAATCCA 59.397 38.462 0.00 0.00 33.91 3.41
3386 7298 7.122650 GTCATTTTCATCCTTGACCTAATCCAA 59.877 37.037 0.00 0.00 33.91 3.53
3387 7299 7.840716 TCATTTTCATCCTTGACCTAATCCAAT 59.159 33.333 0.00 0.00 0.00 3.16
3388 7300 9.135189 CATTTTCATCCTTGACCTAATCCAATA 57.865 33.333 0.00 0.00 0.00 1.90
3389 7301 9.887862 ATTTTCATCCTTGACCTAATCCAATAT 57.112 29.630 0.00 0.00 0.00 1.28
3390 7302 9.713684 TTTTCATCCTTGACCTAATCCAATATT 57.286 29.630 0.00 0.00 0.00 1.28
3391 7303 8.924511 TTCATCCTTGACCTAATCCAATATTC 57.075 34.615 0.00 0.00 0.00 1.75
3392 7304 8.280258 TCATCCTTGACCTAATCCAATATTCT 57.720 34.615 0.00 0.00 0.00 2.40
3393 7305 8.727149 TCATCCTTGACCTAATCCAATATTCTT 58.273 33.333 0.00 0.00 0.00 2.52
3394 7306 9.359653 CATCCTTGACCTAATCCAATATTCTTT 57.640 33.333 0.00 0.00 0.00 2.52
3395 7307 9.942526 ATCCTTGACCTAATCCAATATTCTTTT 57.057 29.630 0.00 0.00 0.00 2.27
3396 7308 9.768215 TCCTTGACCTAATCCAATATTCTTTTT 57.232 29.630 0.00 0.00 0.00 1.94
3402 7314 9.868160 ACCTAATCCAATATTCTTTTTCTAGGG 57.132 33.333 0.00 0.00 0.00 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
409 411 4.155099 TGAATCTTCTCGCGCCAAAAATTA 59.845 37.500 0.00 0.00 0.00 1.40
410 412 3.057596 TGAATCTTCTCGCGCCAAAAATT 60.058 39.130 0.00 0.00 0.00 1.82
616 3918 2.823147 CAGCAGGGCAGCAGCTAC 60.823 66.667 0.00 0.00 41.70 3.58
656 3959 2.287368 GCGAAAACGGAAACATCACCTT 60.287 45.455 0.00 0.00 0.00 3.50
662 3965 4.533222 CTTTACTGCGAAAACGGAAACAT 58.467 39.130 0.00 0.00 0.00 2.71
668 4327 1.529438 TGAGCTTTACTGCGAAAACGG 59.471 47.619 0.00 0.00 38.13 4.44
679 4338 4.025229 TCGTGTGTGAAATGTGAGCTTTAC 60.025 41.667 0.00 0.00 0.00 2.01
743 4405 3.067106 CACAAACGAATAGCCAGTCAGT 58.933 45.455 0.00 0.00 0.00 3.41
747 4409 1.535462 GTGCACAAACGAATAGCCAGT 59.465 47.619 13.17 0.00 0.00 4.00
753 4415 5.136816 TGGTACTAGTGCACAAACGAATA 57.863 39.130 21.04 0.00 0.00 1.75
759 4421 3.138304 CAGCTTGGTACTAGTGCACAAA 58.862 45.455 21.04 5.62 0.00 2.83
804 4466 2.014128 ACGACTCAACAACCAGTTTGG 58.986 47.619 0.00 0.00 45.02 3.28
805 4467 2.791158 GCACGACTCAACAACCAGTTTG 60.791 50.000 0.00 0.00 38.74 2.93
806 4468 1.400494 GCACGACTCAACAACCAGTTT 59.600 47.619 0.00 0.00 38.74 2.66
859 4521 3.155501 GCTTAATACTAGAGGGCCTCGA 58.844 50.000 27.11 21.54 35.36 4.04
890 4552 2.570135 GAGGGATAAAAGCTCTGCCAG 58.430 52.381 0.00 0.00 0.00 4.85
926 4588 0.608130 TGCTCTGCTCTTTTCGGCTA 59.392 50.000 0.00 0.00 0.00 3.93
931 4593 1.396301 CGTGGATGCTCTGCTCTTTTC 59.604 52.381 0.00 0.00 0.00 2.29
1407 5071 4.860881 TAGCAGGGGAGGCGGAGG 62.861 72.222 0.00 0.00 36.08 4.30
1617 5281 1.375268 GTCTGCTTTGGCGAGCTCT 60.375 57.895 12.85 0.00 43.11 4.09
1626 5290 2.037136 CAGGAGGCCGTCTGCTTTG 61.037 63.158 13.91 0.00 41.66 2.77
1737 5401 3.062466 CTCACCGGAGCGAGTGGA 61.062 66.667 9.46 0.00 33.67 4.02
2055 5719 2.237143 ACCGATGGATTCTTGCTTCAGA 59.763 45.455 0.00 0.00 0.00 3.27
2246 5910 1.359848 GATATTATGCCCGCTCACCG 58.640 55.000 0.00 0.00 0.00 4.94
2257 5921 4.174411 TGACCTTCTCCGCGATATTATG 57.826 45.455 8.23 0.00 0.00 1.90
2259 5923 3.887110 TCTTGACCTTCTCCGCGATATTA 59.113 43.478 8.23 0.00 0.00 0.98
2277 5941 2.093306 TGTCCGCCATTACAGTCTTG 57.907 50.000 0.00 0.00 0.00 3.02
2281 5945 1.671850 CGTCTTGTCCGCCATTACAGT 60.672 52.381 0.00 0.00 0.00 3.55
2296 5960 1.134788 CGCCTTATTCCTCACCGTCTT 60.135 52.381 0.00 0.00 0.00 3.01
2409 6073 2.921754 GTCGTATTACTTGCTGACGCTT 59.078 45.455 0.00 0.00 36.97 4.68
2461 6125 8.082852 AGTCGAGGTACTATACAGCAATTATTG 58.917 37.037 0.00 0.00 41.55 1.90
2475 6139 9.410556 GTTTGTTTAACAATAGTCGAGGTACTA 57.589 33.333 11.50 0.00 36.93 1.82
2476 6140 7.115378 CGTTTGTTTAACAATAGTCGAGGTACT 59.885 37.037 11.50 0.00 38.97 2.73
2477 6141 7.114811 TCGTTTGTTTAACAATAGTCGAGGTAC 59.885 37.037 11.50 2.17 38.00 3.34
2488 6152 5.446143 TGGCAGATCGTTTGTTTAACAAT 57.554 34.783 11.50 0.00 38.00 2.71
2538 6202 2.612212 ACAGCGTGTTCATTCTTTCGTT 59.388 40.909 0.00 0.00 0.00 3.85
2540 6204 2.949714 ACAGCGTGTTCATTCTTTCG 57.050 45.000 0.00 0.00 0.00 3.46
2541 6205 5.090652 TGTAACAGCGTGTTCATTCTTTC 57.909 39.130 6.64 0.00 40.22 2.62
2542 6206 5.493133 TTGTAACAGCGTGTTCATTCTTT 57.507 34.783 6.64 0.00 40.22 2.52
2581 6250 8.532341 CGTAACTTGTACTAGCTTTATCACATG 58.468 37.037 4.10 0.00 0.00 3.21
2583 6252 7.596494 ACGTAACTTGTACTAGCTTTATCACA 58.404 34.615 4.10 0.00 0.00 3.58
2594 6442 5.920193 ATGCCCTAACGTAACTTGTACTA 57.080 39.130 0.00 0.00 0.00 1.82
2595 6443 4.813750 ATGCCCTAACGTAACTTGTACT 57.186 40.909 0.00 0.00 0.00 2.73
2596 6444 6.454186 CGTTTATGCCCTAACGTAACTTGTAC 60.454 42.308 0.00 0.00 41.47 2.90
2617 6465 1.071814 TAGGGCAAGCGTTCCGTTT 59.928 52.632 0.00 0.00 0.00 3.60
2618 6466 1.670083 GTAGGGCAAGCGTTCCGTT 60.670 57.895 0.00 0.00 0.00 4.44
2619 6467 2.047560 GTAGGGCAAGCGTTCCGT 60.048 61.111 0.00 0.00 0.00 4.69
2620 6468 2.047655 TGTAGGGCAAGCGTTCCG 60.048 61.111 0.00 0.00 0.00 4.30
2621 6469 0.605589 AAGTGTAGGGCAAGCGTTCC 60.606 55.000 0.00 0.00 0.00 3.62
2625 6537 1.398390 GATGAAAGTGTAGGGCAAGCG 59.602 52.381 0.00 0.00 0.00 4.68
2636 6548 4.793071 TGTTTGTATTGCGGATGAAAGTG 58.207 39.130 0.00 0.00 0.00 3.16
2643 6555 9.267084 AGTTTAAATTTTGTTTGTATTGCGGAT 57.733 25.926 0.00 0.00 0.00 4.18
2679 6591 8.922237 TGGGTTACATCATGTTTGCATAATATT 58.078 29.630 0.00 0.00 33.30 1.28
2702 6614 5.943706 TGAATTTTTGTCATTTGCATGGG 57.056 34.783 0.00 0.00 0.00 4.00
2849 6761 1.153549 GCAGTAGAGGGCAACGGAG 60.154 63.158 0.00 0.00 37.60 4.63
2891 6803 4.314440 TGAGTGCGGTGGTGGCTC 62.314 66.667 0.00 0.00 0.00 4.70
2892 6804 4.320456 CTGAGTGCGGTGGTGGCT 62.320 66.667 0.00 0.00 0.00 4.75
2902 6814 1.407258 CTCCACTACCTAGCTGAGTGC 59.593 57.143 12.08 0.00 39.42 4.40
2903 6815 2.028130 CCTCCACTACCTAGCTGAGTG 58.972 57.143 0.00 4.73 40.26 3.51
2904 6816 1.923850 TCCTCCACTACCTAGCTGAGT 59.076 52.381 0.00 0.00 0.00 3.41
2905 6817 2.303175 GTCCTCCACTACCTAGCTGAG 58.697 57.143 0.00 0.00 0.00 3.35
2906 6818 1.408405 CGTCCTCCACTACCTAGCTGA 60.408 57.143 0.00 0.00 0.00 4.26
2907 6819 1.025812 CGTCCTCCACTACCTAGCTG 58.974 60.000 0.00 0.00 0.00 4.24
2908 6820 0.752376 GCGTCCTCCACTACCTAGCT 60.752 60.000 0.00 0.00 0.00 3.32
2909 6821 1.734748 GCGTCCTCCACTACCTAGC 59.265 63.158 0.00 0.00 0.00 3.42
2910 6822 1.108132 GGGCGTCCTCCACTACCTAG 61.108 65.000 0.00 0.00 0.00 3.02
2911 6823 1.076485 GGGCGTCCTCCACTACCTA 60.076 63.158 0.00 0.00 0.00 3.08
2912 6824 2.363925 GGGCGTCCTCCACTACCT 60.364 66.667 0.00 0.00 0.00 3.08
2913 6825 3.468140 GGGGCGTCCTCCACTACC 61.468 72.222 5.77 0.00 0.00 3.18
2914 6826 3.468140 GGGGGCGTCCTCCACTAC 61.468 72.222 5.77 0.00 35.33 2.73
2935 6847 2.920964 CTTGGCGATCGCGATGTCG 61.921 63.158 31.76 26.00 43.06 4.35
2936 6848 2.589492 CCTTGGCGATCGCGATGTC 61.589 63.158 31.76 19.84 43.06 3.06
2937 6849 2.586079 CCTTGGCGATCGCGATGT 60.586 61.111 31.76 3.33 43.06 3.06
2938 6850 4.005472 GCCTTGGCGATCGCGATG 62.005 66.667 31.76 27.84 43.06 3.84
2939 6851 4.529219 TGCCTTGGCGATCGCGAT 62.529 61.111 31.76 23.97 43.06 4.58
2942 6854 3.173390 GATGTGCCTTGGCGATCGC 62.173 63.158 31.52 31.52 41.06 4.58
2943 6855 2.537560 GGATGTGCCTTGGCGATCG 61.538 63.158 11.69 11.69 0.00 3.69
2944 6856 3.425422 GGATGTGCCTTGGCGATC 58.575 61.111 7.18 10.32 0.00 3.69
2953 6865 0.107703 TCCGTGAATGAGGATGTGCC 60.108 55.000 0.00 0.00 0.00 5.01
2954 6866 1.009829 GTCCGTGAATGAGGATGTGC 58.990 55.000 0.00 0.00 38.97 4.57
2955 6867 2.674852 CAAGTCCGTGAATGAGGATGTG 59.325 50.000 0.00 0.00 38.97 3.21
2956 6868 2.303022 ACAAGTCCGTGAATGAGGATGT 59.697 45.455 0.00 0.00 38.97 3.06
2957 6869 2.932614 GACAAGTCCGTGAATGAGGATG 59.067 50.000 0.00 0.00 38.97 3.51
2958 6870 2.417379 CGACAAGTCCGTGAATGAGGAT 60.417 50.000 0.00 0.00 38.97 3.24
2959 6871 1.067846 CGACAAGTCCGTGAATGAGGA 60.068 52.381 0.00 0.00 0.00 3.71
2960 6872 1.350193 CGACAAGTCCGTGAATGAGG 58.650 55.000 0.00 0.00 0.00 3.86
2961 6873 0.716108 GCGACAAGTCCGTGAATGAG 59.284 55.000 0.00 0.00 0.00 2.90
2962 6874 0.032815 TGCGACAAGTCCGTGAATGA 59.967 50.000 0.00 0.00 0.00 2.57
2963 6875 0.163788 GTGCGACAAGTCCGTGAATG 59.836 55.000 0.00 0.00 0.00 2.67
2964 6876 0.949105 GGTGCGACAAGTCCGTGAAT 60.949 55.000 0.00 0.00 0.00 2.57
2965 6877 1.593209 GGTGCGACAAGTCCGTGAA 60.593 57.895 0.00 0.00 0.00 3.18
2966 6878 2.028484 GGTGCGACAAGTCCGTGA 59.972 61.111 0.00 0.00 0.00 4.35
2967 6879 1.433053 TTTGGTGCGACAAGTCCGTG 61.433 55.000 0.00 0.00 0.00 4.94
2968 6880 1.153329 TTTGGTGCGACAAGTCCGT 60.153 52.632 0.00 0.00 0.00 4.69
2969 6881 1.278637 GTTTGGTGCGACAAGTCCG 59.721 57.895 0.00 0.00 0.00 4.79
2970 6882 1.278637 CGTTTGGTGCGACAAGTCC 59.721 57.895 0.00 0.00 0.00 3.85
2971 6883 1.368850 GCGTTTGGTGCGACAAGTC 60.369 57.895 0.00 0.00 0.00 3.01
2972 6884 2.047151 CTGCGTTTGGTGCGACAAGT 62.047 55.000 0.00 0.00 34.24 3.16
2973 6885 1.369209 CTGCGTTTGGTGCGACAAG 60.369 57.895 0.00 0.00 34.24 3.16
2974 6886 2.712539 CTGCGTTTGGTGCGACAA 59.287 55.556 0.00 0.00 34.24 3.18
2975 6887 3.947841 GCTGCGTTTGGTGCGACA 61.948 61.111 0.00 0.00 34.24 4.35
2976 6888 3.947841 TGCTGCGTTTGGTGCGAC 61.948 61.111 0.00 0.00 34.24 5.19
2977 6889 3.947841 GTGCTGCGTTTGGTGCGA 61.948 61.111 0.00 0.00 34.24 5.10
2978 6890 3.748071 TTGTGCTGCGTTTGGTGCG 62.748 57.895 0.00 0.00 34.24 5.34
2979 6891 2.103934 TTGTGCTGCGTTTGGTGC 59.896 55.556 0.00 0.00 0.00 5.01
2980 6892 0.866906 CAGTTGTGCTGCGTTTGGTG 60.867 55.000 0.00 0.00 38.52 4.17
2981 6893 1.433064 CAGTTGTGCTGCGTTTGGT 59.567 52.632 0.00 0.00 38.52 3.67
2982 6894 4.307258 CAGTTGTGCTGCGTTTGG 57.693 55.556 0.00 0.00 38.52 3.28
2989 6901 4.710555 GAGCAGATCTCACAGTTGTGCTG 61.711 52.174 10.12 9.58 42.35 4.41
2990 6902 1.347050 AGCAGATCTCACAGTTGTGCT 59.653 47.619 7.38 1.42 45.25 4.40
2991 6903 1.731160 GAGCAGATCTCACAGTTGTGC 59.269 52.381 7.38 0.00 45.25 4.57
2992 6904 1.991264 CGAGCAGATCTCACAGTTGTG 59.009 52.381 5.91 5.91 46.91 3.33
2993 6905 1.615883 ACGAGCAGATCTCACAGTTGT 59.384 47.619 0.00 0.00 41.98 3.32
2994 6906 2.257894 GACGAGCAGATCTCACAGTTG 58.742 52.381 0.00 0.00 41.98 3.16
2995 6907 1.135546 CGACGAGCAGATCTCACAGTT 60.136 52.381 0.00 0.00 41.98 3.16
2996 6908 0.449786 CGACGAGCAGATCTCACAGT 59.550 55.000 0.00 0.00 41.98 3.55
2997 6909 0.729690 TCGACGAGCAGATCTCACAG 59.270 55.000 0.00 0.00 41.98 3.66
2998 6910 1.064654 CATCGACGAGCAGATCTCACA 59.935 52.381 3.01 0.00 41.98 3.58
2999 6911 1.752753 CATCGACGAGCAGATCTCAC 58.247 55.000 3.01 0.00 41.98 3.51
3000 6912 0.029967 GCATCGACGAGCAGATCTCA 59.970 55.000 3.01 0.00 41.98 3.27
3001 6913 0.996229 CGCATCGACGAGCAGATCTC 60.996 60.000 15.99 0.00 38.47 2.75
3002 6914 1.009108 CGCATCGACGAGCAGATCT 60.009 57.895 15.99 0.00 34.06 2.75
3003 6915 2.013483 CCGCATCGACGAGCAGATC 61.013 63.158 15.99 0.00 34.06 2.75
3004 6916 2.026734 CCGCATCGACGAGCAGAT 59.973 61.111 15.99 0.00 34.06 2.90
3005 6917 4.193334 CCCGCATCGACGAGCAGA 62.193 66.667 15.99 0.00 34.06 4.26
3009 6921 3.538028 ATACGCCCGCATCGACGAG 62.538 63.158 3.01 0.00 34.06 4.18
3010 6922 3.531920 GATACGCCCGCATCGACGA 62.532 63.158 0.00 0.00 34.06 4.20
3011 6923 3.097728 GATACGCCCGCATCGACG 61.098 66.667 0.00 0.00 33.84 5.12
3012 6924 2.016704 CTGATACGCCCGCATCGAC 61.017 63.158 0.00 0.00 0.00 4.20
3013 6925 2.335011 CTGATACGCCCGCATCGA 59.665 61.111 0.00 0.00 0.00 3.59
3014 6926 3.406361 GCTGATACGCCCGCATCG 61.406 66.667 0.00 0.00 0.00 3.84
3015 6927 3.044305 GGCTGATACGCCCGCATC 61.044 66.667 0.00 0.00 44.41 3.91
3040 6952 1.002544 GTAGCCTTCTCAGTTGCCACT 59.997 52.381 0.00 0.00 0.00 4.00
3041 6953 1.002544 AGTAGCCTTCTCAGTTGCCAC 59.997 52.381 0.00 0.00 0.00 5.01
3042 6954 1.352083 AGTAGCCTTCTCAGTTGCCA 58.648 50.000 0.00 0.00 0.00 4.92
3043 6955 2.351455 GAAGTAGCCTTCTCAGTTGCC 58.649 52.381 0.00 0.00 43.18 4.52
3044 6956 1.996191 CGAAGTAGCCTTCTCAGTTGC 59.004 52.381 1.93 0.00 44.12 4.17
3045 6957 3.246619 GTCGAAGTAGCCTTCTCAGTTG 58.753 50.000 0.00 0.00 44.12 3.16
3046 6958 2.231721 GGTCGAAGTAGCCTTCTCAGTT 59.768 50.000 0.00 0.00 44.12 3.16
3047 6959 1.819903 GGTCGAAGTAGCCTTCTCAGT 59.180 52.381 0.00 0.00 44.12 3.41
3048 6960 1.202200 CGGTCGAAGTAGCCTTCTCAG 60.202 57.143 0.00 0.00 44.12 3.35
3049 6961 0.809385 CGGTCGAAGTAGCCTTCTCA 59.191 55.000 0.00 0.00 44.12 3.27
3050 6962 0.525882 GCGGTCGAAGTAGCCTTCTC 60.526 60.000 0.00 0.00 44.12 2.87
3051 6963 0.966370 AGCGGTCGAAGTAGCCTTCT 60.966 55.000 0.00 0.00 44.12 2.85
3052 6964 0.737219 TAGCGGTCGAAGTAGCCTTC 59.263 55.000 0.00 0.00 43.09 3.46
3053 6965 0.455005 GTAGCGGTCGAAGTAGCCTT 59.545 55.000 0.00 0.00 0.00 4.35
3054 6966 1.712977 CGTAGCGGTCGAAGTAGCCT 61.713 60.000 0.00 0.00 0.00 4.58
3055 6967 1.298190 CGTAGCGGTCGAAGTAGCC 60.298 63.158 0.00 0.00 0.00 3.93
3056 6968 4.281946 CGTAGCGGTCGAAGTAGC 57.718 61.111 0.00 0.00 0.00 3.58
3076 6988 2.099062 CAGACGCCGCTTCAATGC 59.901 61.111 0.00 0.00 0.00 3.56
3077 6989 1.421485 GACAGACGCCGCTTCAATG 59.579 57.895 0.00 0.00 0.00 2.82
3078 6990 1.741770 GGACAGACGCCGCTTCAAT 60.742 57.895 0.00 0.00 0.00 2.57
3079 6991 2.357034 GGACAGACGCCGCTTCAA 60.357 61.111 0.00 0.00 0.00 2.69
3080 6992 4.717629 CGGACAGACGCCGCTTCA 62.718 66.667 0.00 0.00 42.55 3.02
3088 7000 4.056125 TGAGCAGGCGGACAGACG 62.056 66.667 0.00 0.00 0.00 4.18
3089 7001 2.433318 GTGAGCAGGCGGACAGAC 60.433 66.667 0.00 0.00 0.00 3.51
3090 7002 4.056125 CGTGAGCAGGCGGACAGA 62.056 66.667 0.00 0.00 0.00 3.41
3102 7014 3.270877 ACCCTGCTTAAAATAGCGTGAG 58.729 45.455 0.00 0.00 44.18 3.51
3103 7015 3.343941 ACCCTGCTTAAAATAGCGTGA 57.656 42.857 0.00 0.00 44.18 4.35
3104 7016 3.689649 AGAACCCTGCTTAAAATAGCGTG 59.310 43.478 0.00 0.00 44.18 5.34
3105 7017 3.951663 AGAACCCTGCTTAAAATAGCGT 58.048 40.909 0.00 0.00 44.18 5.07
3106 7018 4.662145 CAAGAACCCTGCTTAAAATAGCG 58.338 43.478 0.00 0.00 44.18 4.26
3107 7019 4.424626 GCAAGAACCCTGCTTAAAATAGC 58.575 43.478 0.00 0.00 41.59 2.97
3108 7020 4.156008 ACGCAAGAACCCTGCTTAAAATAG 59.844 41.667 0.00 0.00 43.62 1.73
3109 7021 4.076394 ACGCAAGAACCCTGCTTAAAATA 58.924 39.130 0.00 0.00 43.62 1.40
3110 7022 2.890945 ACGCAAGAACCCTGCTTAAAAT 59.109 40.909 0.00 0.00 43.62 1.82
3111 7023 2.292292 GACGCAAGAACCCTGCTTAAAA 59.708 45.455 0.00 0.00 43.62 1.52
3112 7024 1.877443 GACGCAAGAACCCTGCTTAAA 59.123 47.619 0.00 0.00 43.62 1.52
3113 7025 1.519408 GACGCAAGAACCCTGCTTAA 58.481 50.000 0.00 0.00 43.62 1.85
3114 7026 0.669318 CGACGCAAGAACCCTGCTTA 60.669 55.000 0.00 0.00 43.62 3.09
3115 7027 1.961277 CGACGCAAGAACCCTGCTT 60.961 57.895 0.00 0.00 43.62 3.91
3116 7028 2.357517 CGACGCAAGAACCCTGCT 60.358 61.111 0.00 0.00 43.62 4.24
3117 7029 3.423154 CCGACGCAAGAACCCTGC 61.423 66.667 0.00 0.00 43.62 4.85
3118 7030 3.423154 GCCGACGCAAGAACCCTG 61.423 66.667 0.00 0.00 43.62 4.45
3119 7031 4.699522 GGCCGACGCAAGAACCCT 62.700 66.667 0.00 0.00 43.62 4.34
3121 7033 2.975799 TTGGCCGACGCAAGAACC 60.976 61.111 0.00 0.00 43.62 3.62
3122 7034 2.251371 GTTGGCCGACGCAAGAAC 59.749 61.111 7.56 0.00 43.62 3.01
3123 7035 2.975799 GGTTGGCCGACGCAAGAA 60.976 61.111 17.21 0.00 43.62 2.52
3128 7040 3.767630 ATATGGGGTTGGCCGACGC 62.768 63.158 28.10 28.10 34.97 5.19
3129 7041 1.597027 GATATGGGGTTGGCCGACG 60.597 63.158 17.21 0.00 34.97 5.12
3130 7042 1.228154 GGATATGGGGTTGGCCGAC 60.228 63.158 15.51 15.51 34.97 4.79
3131 7043 1.385347 AGGATATGGGGTTGGCCGA 60.385 57.895 0.00 0.00 34.97 5.54
3132 7044 1.073199 GAGGATATGGGGTTGGCCG 59.927 63.158 0.00 0.00 34.97 6.13
3133 7045 0.402121 GAGAGGATATGGGGTTGGCC 59.598 60.000 0.00 0.00 0.00 5.36
3134 7046 0.402121 GGAGAGGATATGGGGTTGGC 59.598 60.000 0.00 0.00 0.00 4.52
3135 7047 1.981495 GAGGAGAGGATATGGGGTTGG 59.019 57.143 0.00 0.00 0.00 3.77
3136 7048 2.903135 GAGAGGAGAGGATATGGGGTTG 59.097 54.545 0.00 0.00 0.00 3.77
3137 7049 2.800788 AGAGAGGAGAGGATATGGGGTT 59.199 50.000 0.00 0.00 0.00 4.11
3138 7050 2.111613 CAGAGAGGAGAGGATATGGGGT 59.888 54.545 0.00 0.00 0.00 4.95
3139 7051 2.818921 CAGAGAGGAGAGGATATGGGG 58.181 57.143 0.00 0.00 0.00 4.96
3140 7052 2.178580 GCAGAGAGGAGAGGATATGGG 58.821 57.143 0.00 0.00 0.00 4.00
3141 7053 2.562298 GTGCAGAGAGGAGAGGATATGG 59.438 54.545 0.00 0.00 0.00 2.74
3142 7054 3.005684 GTGTGCAGAGAGGAGAGGATATG 59.994 52.174 0.00 0.00 0.00 1.78
3143 7055 3.230134 GTGTGCAGAGAGGAGAGGATAT 58.770 50.000 0.00 0.00 0.00 1.63
3144 7056 2.660572 GTGTGCAGAGAGGAGAGGATA 58.339 52.381 0.00 0.00 0.00 2.59
3145 7057 1.484038 GTGTGCAGAGAGGAGAGGAT 58.516 55.000 0.00 0.00 0.00 3.24
3146 7058 0.613292 GGTGTGCAGAGAGGAGAGGA 60.613 60.000 0.00 0.00 0.00 3.71
3147 7059 1.612395 GGGTGTGCAGAGAGGAGAGG 61.612 65.000 0.00 0.00 0.00 3.69
3148 7060 0.614415 AGGGTGTGCAGAGAGGAGAG 60.614 60.000 0.00 0.00 0.00 3.20
3149 7061 0.613292 GAGGGTGTGCAGAGAGGAGA 60.613 60.000 0.00 0.00 0.00 3.71
3150 7062 0.614415 AGAGGGTGTGCAGAGAGGAG 60.614 60.000 0.00 0.00 0.00 3.69
3151 7063 0.613292 GAGAGGGTGTGCAGAGAGGA 60.613 60.000 0.00 0.00 0.00 3.71
3152 7064 0.614415 AGAGAGGGTGTGCAGAGAGG 60.614 60.000 0.00 0.00 0.00 3.69
3153 7065 0.531657 CAGAGAGGGTGTGCAGAGAG 59.468 60.000 0.00 0.00 0.00 3.20
3154 7066 0.178950 ACAGAGAGGGTGTGCAGAGA 60.179 55.000 0.00 0.00 0.00 3.10
3155 7067 0.037512 CACAGAGAGGGTGTGCAGAG 60.038 60.000 0.00 0.00 39.00 3.35
3156 7068 0.469892 TCACAGAGAGGGTGTGCAGA 60.470 55.000 0.00 0.00 44.22 4.26
3157 7069 0.612229 ATCACAGAGAGGGTGTGCAG 59.388 55.000 0.00 0.00 44.22 4.41
3158 7070 0.610174 GATCACAGAGAGGGTGTGCA 59.390 55.000 0.00 0.00 44.22 4.57
3159 7071 0.901124 AGATCACAGAGAGGGTGTGC 59.099 55.000 0.00 0.00 44.22 4.57
3160 7072 2.174360 TCAGATCACAGAGAGGGTGTG 58.826 52.381 0.00 0.00 45.65 3.82
3161 7073 2.612285 TCAGATCACAGAGAGGGTGT 57.388 50.000 0.00 0.00 37.52 4.16
3162 7074 2.364970 GGATCAGATCACAGAGAGGGTG 59.635 54.545 12.66 0.00 37.60 4.61
3163 7075 2.676748 GGATCAGATCACAGAGAGGGT 58.323 52.381 12.66 0.00 0.00 4.34
3164 7076 1.612950 CGGATCAGATCACAGAGAGGG 59.387 57.143 12.66 0.00 0.00 4.30
3165 7077 2.580962 TCGGATCAGATCACAGAGAGG 58.419 52.381 12.66 0.00 0.00 3.69
3166 7078 3.191162 GGATCGGATCAGATCACAGAGAG 59.809 52.174 29.23 0.00 46.55 3.20
3167 7079 3.153130 GGATCGGATCAGATCACAGAGA 58.847 50.000 29.23 3.97 46.55 3.10
3168 7080 3.156293 AGGATCGGATCAGATCACAGAG 58.844 50.000 29.23 0.00 46.55 3.35
3169 7081 3.153130 GAGGATCGGATCAGATCACAGA 58.847 50.000 29.23 8.52 46.55 3.41
3170 7082 3.156293 AGAGGATCGGATCAGATCACAG 58.844 50.000 29.23 3.44 46.55 3.66
3171 7083 3.153130 GAGAGGATCGGATCAGATCACA 58.847 50.000 29.23 0.00 46.55 3.58
3172 7084 3.153130 TGAGAGGATCGGATCAGATCAC 58.847 50.000 29.23 22.89 46.55 3.06
3173 7085 3.515602 TGAGAGGATCGGATCAGATCA 57.484 47.619 29.23 13.40 46.55 2.92
3174 7086 3.429272 GCATGAGAGGATCGGATCAGATC 60.429 52.174 23.09 23.09 44.62 2.75
3175 7087 2.496871 GCATGAGAGGATCGGATCAGAT 59.503 50.000 18.99 8.17 42.67 2.90
3176 7088 1.891811 GCATGAGAGGATCGGATCAGA 59.108 52.381 18.99 0.00 42.67 3.27
3177 7089 1.402588 CGCATGAGAGGATCGGATCAG 60.403 57.143 18.99 0.00 42.67 2.90
3178 7090 0.600057 CGCATGAGAGGATCGGATCA 59.400 55.000 18.99 0.48 42.67 2.92
3179 7091 0.600557 ACGCATGAGAGGATCGGATC 59.399 55.000 9.54 9.54 42.67 3.36
3180 7092 0.600557 GACGCATGAGAGGATCGGAT 59.399 55.000 2.50 0.00 42.67 4.18
3181 7093 1.786049 CGACGCATGAGAGGATCGGA 61.786 60.000 2.50 0.00 42.67 4.55
3182 7094 1.371022 CGACGCATGAGAGGATCGG 60.371 63.158 2.50 0.00 42.67 4.18
3183 7095 2.013483 GCGACGCATGAGAGGATCG 61.013 63.158 16.42 3.03 42.67 3.69
3184 7096 0.593618 TAGCGACGCATGAGAGGATC 59.406 55.000 23.70 0.00 0.00 3.36
3185 7097 0.312416 GTAGCGACGCATGAGAGGAT 59.688 55.000 23.70 0.00 0.00 3.24
3186 7098 0.748367 AGTAGCGACGCATGAGAGGA 60.748 55.000 23.70 0.00 0.00 3.71
3187 7099 0.593518 CAGTAGCGACGCATGAGAGG 60.594 60.000 23.70 0.49 0.00 3.69
3188 7100 0.099613 ACAGTAGCGACGCATGAGAG 59.900 55.000 23.70 8.89 0.00 3.20
3189 7101 1.375551 TACAGTAGCGACGCATGAGA 58.624 50.000 23.70 8.45 0.00 3.27
3190 7102 1.846782 GTTACAGTAGCGACGCATGAG 59.153 52.381 23.70 11.44 0.00 2.90
3191 7103 1.200484 TGTTACAGTAGCGACGCATGA 59.800 47.619 23.70 3.57 0.00 3.07
3192 7104 1.624487 TGTTACAGTAGCGACGCATG 58.376 50.000 23.70 18.85 0.00 4.06
3193 7105 2.460918 GATGTTACAGTAGCGACGCAT 58.539 47.619 23.70 9.74 0.00 4.73
3194 7106 1.468565 GGATGTTACAGTAGCGACGCA 60.469 52.381 23.70 5.17 0.00 5.24
3195 7107 1.197910 GGATGTTACAGTAGCGACGC 58.802 55.000 13.03 13.03 0.00 5.19
3196 7108 2.451132 CAGGATGTTACAGTAGCGACG 58.549 52.381 0.00 0.00 0.00 5.12
3197 7109 2.426024 TCCAGGATGTTACAGTAGCGAC 59.574 50.000 0.00 0.00 0.00 5.19
3198 7110 2.730382 TCCAGGATGTTACAGTAGCGA 58.270 47.619 0.00 0.00 0.00 4.93
3199 7111 3.735237 ATCCAGGATGTTACAGTAGCG 57.265 47.619 0.00 0.00 0.00 4.26
3200 7112 5.449177 GCAAAATCCAGGATGTTACAGTAGC 60.449 44.000 4.34 0.00 0.00 3.58
3201 7113 5.066505 GGCAAAATCCAGGATGTTACAGTAG 59.933 44.000 4.34 0.00 0.00 2.57
3202 7114 4.947388 GGCAAAATCCAGGATGTTACAGTA 59.053 41.667 4.34 0.00 0.00 2.74
3203 7115 3.763897 GGCAAAATCCAGGATGTTACAGT 59.236 43.478 4.34 0.00 0.00 3.55
3204 7116 3.131046 GGGCAAAATCCAGGATGTTACAG 59.869 47.826 4.34 0.00 0.00 2.74
3205 7117 3.096092 GGGCAAAATCCAGGATGTTACA 58.904 45.455 4.34 0.00 0.00 2.41
3206 7118 3.365472 AGGGCAAAATCCAGGATGTTAC 58.635 45.455 4.34 0.00 0.00 2.50
3207 7119 3.756082 AGGGCAAAATCCAGGATGTTA 57.244 42.857 4.34 0.00 0.00 2.41
3208 7120 2.629017 AGGGCAAAATCCAGGATGTT 57.371 45.000 1.44 0.00 0.00 2.71
3209 7121 2.629017 AAGGGCAAAATCCAGGATGT 57.371 45.000 1.44 0.00 0.00 3.06
3210 7122 3.986996 AAAAGGGCAAAATCCAGGATG 57.013 42.857 1.44 0.00 0.00 3.51
3211 7123 4.019950 CAGAAAAAGGGCAAAATCCAGGAT 60.020 41.667 0.00 0.00 0.00 3.24
3212 7124 3.324556 CAGAAAAAGGGCAAAATCCAGGA 59.675 43.478 0.00 0.00 0.00 3.86
3213 7125 3.324556 TCAGAAAAAGGGCAAAATCCAGG 59.675 43.478 0.00 0.00 0.00 4.45
3214 7126 4.605640 TCAGAAAAAGGGCAAAATCCAG 57.394 40.909 0.00 0.00 0.00 3.86
3215 7127 4.592351 TCATCAGAAAAAGGGCAAAATCCA 59.408 37.500 0.00 0.00 0.00 3.41
3216 7128 5.151297 TCATCAGAAAAAGGGCAAAATCC 57.849 39.130 0.00 0.00 0.00 3.01
3217 7129 7.677454 AAATCATCAGAAAAAGGGCAAAATC 57.323 32.000 0.00 0.00 0.00 2.17
3218 7130 7.175467 GGAAAATCATCAGAAAAAGGGCAAAAT 59.825 33.333 0.00 0.00 0.00 1.82
3219 7131 6.486320 GGAAAATCATCAGAAAAAGGGCAAAA 59.514 34.615 0.00 0.00 0.00 2.44
3220 7132 5.997129 GGAAAATCATCAGAAAAAGGGCAAA 59.003 36.000 0.00 0.00 0.00 3.68
3221 7133 5.307716 AGGAAAATCATCAGAAAAAGGGCAA 59.692 36.000 0.00 0.00 0.00 4.52
3222 7134 4.840115 AGGAAAATCATCAGAAAAAGGGCA 59.160 37.500 0.00 0.00 0.00 5.36
3223 7135 5.173664 CAGGAAAATCATCAGAAAAAGGGC 58.826 41.667 0.00 0.00 0.00 5.19
3224 7136 5.481473 TCCAGGAAAATCATCAGAAAAAGGG 59.519 40.000 0.00 0.00 0.00 3.95
3225 7137 6.594788 TCCAGGAAAATCATCAGAAAAAGG 57.405 37.500 0.00 0.00 0.00 3.11
3226 7138 9.148104 GAAATCCAGGAAAATCATCAGAAAAAG 57.852 33.333 0.00 0.00 0.00 2.27
3227 7139 8.873144 AGAAATCCAGGAAAATCATCAGAAAAA 58.127 29.630 0.00 0.00 0.00 1.94
3228 7140 8.426569 AGAAATCCAGGAAAATCATCAGAAAA 57.573 30.769 0.00 0.00 0.00 2.29
3229 7141 8.308931 CAAGAAATCCAGGAAAATCATCAGAAA 58.691 33.333 0.00 0.00 0.00 2.52
3230 7142 7.670979 TCAAGAAATCCAGGAAAATCATCAGAA 59.329 33.333 0.00 0.00 0.00 3.02
3231 7143 7.177184 TCAAGAAATCCAGGAAAATCATCAGA 58.823 34.615 0.00 0.00 0.00 3.27
3232 7144 7.400599 TCAAGAAATCCAGGAAAATCATCAG 57.599 36.000 0.00 0.00 0.00 2.90
3233 7145 7.966339 ATCAAGAAATCCAGGAAAATCATCA 57.034 32.000 0.00 0.00 0.00 3.07
3234 7146 9.095065 CAAATCAAGAAATCCAGGAAAATCATC 57.905 33.333 0.00 0.00 0.00 2.92
3235 7147 8.818860 TCAAATCAAGAAATCCAGGAAAATCAT 58.181 29.630 0.00 0.00 0.00 2.45
3236 7148 8.192743 TCAAATCAAGAAATCCAGGAAAATCA 57.807 30.769 0.00 0.00 0.00 2.57
3237 7149 9.662947 ATTCAAATCAAGAAATCCAGGAAAATC 57.337 29.630 0.00 0.00 0.00 2.17
3239 7151 9.275398 CAATTCAAATCAAGAAATCCAGGAAAA 57.725 29.630 0.00 0.00 0.00 2.29
3240 7152 8.431222 ACAATTCAAATCAAGAAATCCAGGAAA 58.569 29.630 0.00 0.00 0.00 3.13
3241 7153 7.965718 ACAATTCAAATCAAGAAATCCAGGAA 58.034 30.769 0.00 0.00 0.00 3.36
3242 7154 7.543359 ACAATTCAAATCAAGAAATCCAGGA 57.457 32.000 0.00 0.00 0.00 3.86
3243 7155 8.611654 AAACAATTCAAATCAAGAAATCCAGG 57.388 30.769 0.00 0.00 0.00 4.45
3246 7158 9.882996 GGAAAAACAATTCAAATCAAGAAATCC 57.117 29.630 0.00 0.00 0.00 3.01
3247 7159 9.584839 CGGAAAAACAATTCAAATCAAGAAATC 57.415 29.630 0.00 0.00 0.00 2.17
3248 7160 9.108284 ACGGAAAAACAATTCAAATCAAGAAAT 57.892 25.926 0.00 0.00 0.00 2.17
3249 7161 8.386606 CACGGAAAAACAATTCAAATCAAGAAA 58.613 29.630 0.00 0.00 0.00 2.52
3250 7162 7.010923 CCACGGAAAAACAATTCAAATCAAGAA 59.989 33.333 0.00 0.00 0.00 2.52
3251 7163 6.478344 CCACGGAAAAACAATTCAAATCAAGA 59.522 34.615 0.00 0.00 0.00 3.02
3252 7164 6.648502 CCACGGAAAAACAATTCAAATCAAG 58.351 36.000 0.00 0.00 0.00 3.02
3253 7165 5.007136 GCCACGGAAAAACAATTCAAATCAA 59.993 36.000 0.00 0.00 0.00 2.57
3254 7166 4.509600 GCCACGGAAAAACAATTCAAATCA 59.490 37.500 0.00 0.00 0.00 2.57
3255 7167 4.749598 AGCCACGGAAAAACAATTCAAATC 59.250 37.500 0.00 0.00 0.00 2.17
3256 7168 4.702831 AGCCACGGAAAAACAATTCAAAT 58.297 34.783 0.00 0.00 0.00 2.32
3257 7169 4.130286 AGCCACGGAAAAACAATTCAAA 57.870 36.364 0.00 0.00 0.00 2.69
3258 7170 3.810310 AGCCACGGAAAAACAATTCAA 57.190 38.095 0.00 0.00 0.00 2.69
3259 7171 4.279671 ACATAGCCACGGAAAAACAATTCA 59.720 37.500 0.00 0.00 0.00 2.57
3260 7172 4.621034 CACATAGCCACGGAAAAACAATTC 59.379 41.667 0.00 0.00 0.00 2.17
3261 7173 4.555262 CACATAGCCACGGAAAAACAATT 58.445 39.130 0.00 0.00 0.00 2.32
3262 7174 3.056891 CCACATAGCCACGGAAAAACAAT 60.057 43.478 0.00 0.00 0.00 2.71
3263 7175 2.294791 CCACATAGCCACGGAAAAACAA 59.705 45.455 0.00 0.00 0.00 2.83
3264 7176 1.883275 CCACATAGCCACGGAAAAACA 59.117 47.619 0.00 0.00 0.00 2.83
3265 7177 1.883926 ACCACATAGCCACGGAAAAAC 59.116 47.619 0.00 0.00 0.00 2.43
3266 7178 2.279935 ACCACATAGCCACGGAAAAA 57.720 45.000 0.00 0.00 0.00 1.94
3267 7179 2.279935 AACCACATAGCCACGGAAAA 57.720 45.000 0.00 0.00 0.00 2.29
3268 7180 2.279935 AAACCACATAGCCACGGAAA 57.720 45.000 0.00 0.00 0.00 3.13
3269 7181 1.883275 CAAAACCACATAGCCACGGAA 59.117 47.619 0.00 0.00 0.00 4.30
3270 7182 1.072489 TCAAAACCACATAGCCACGGA 59.928 47.619 0.00 0.00 0.00 4.69
3271 7183 1.529226 TCAAAACCACATAGCCACGG 58.471 50.000 0.00 0.00 0.00 4.94
3272 7184 3.004315 AGTTTCAAAACCACATAGCCACG 59.996 43.478 2.08 0.00 39.71 4.94
3273 7185 4.584327 AGTTTCAAAACCACATAGCCAC 57.416 40.909 2.08 0.00 39.71 5.01
3274 7186 4.202202 CCAAGTTTCAAAACCACATAGCCA 60.202 41.667 2.08 0.00 39.71 4.75
3275 7187 4.306600 CCAAGTTTCAAAACCACATAGCC 58.693 43.478 2.08 0.00 39.71 3.93
3276 7188 4.038642 TCCCAAGTTTCAAAACCACATAGC 59.961 41.667 2.08 0.00 39.71 2.97
3277 7189 5.782893 TCCCAAGTTTCAAAACCACATAG 57.217 39.130 2.08 0.00 39.71 2.23
3278 7190 5.894393 TCTTCCCAAGTTTCAAAACCACATA 59.106 36.000 2.08 0.00 39.71 2.29
3279 7191 4.714308 TCTTCCCAAGTTTCAAAACCACAT 59.286 37.500 2.08 0.00 39.71 3.21
3280 7192 4.090090 TCTTCCCAAGTTTCAAAACCACA 58.910 39.130 2.08 0.00 39.71 4.17
3281 7193 4.729227 TCTTCCCAAGTTTCAAAACCAC 57.271 40.909 2.08 0.00 39.71 4.16
3282 7194 4.959210 TGATCTTCCCAAGTTTCAAAACCA 59.041 37.500 2.08 0.00 39.71 3.67
3283 7195 5.529581 TGATCTTCCCAAGTTTCAAAACC 57.470 39.130 2.08 0.00 39.71 3.27
3284 7196 6.515832 ACATGATCTTCCCAAGTTTCAAAAC 58.484 36.000 0.00 0.00 39.17 2.43
3285 7197 6.550854 AGACATGATCTTCCCAAGTTTCAAAA 59.449 34.615 0.00 0.00 31.62 2.44
3286 7198 6.070656 AGACATGATCTTCCCAAGTTTCAAA 58.929 36.000 0.00 0.00 31.62 2.69
3287 7199 5.634118 AGACATGATCTTCCCAAGTTTCAA 58.366 37.500 0.00 0.00 31.62 2.69
3288 7200 5.246981 AGACATGATCTTCCCAAGTTTCA 57.753 39.130 0.00 0.00 31.62 2.69
3302 7214 9.838339 CCACTATAAAACCTAGAAAGACATGAT 57.162 33.333 0.00 0.00 0.00 2.45
3303 7215 7.769044 GCCACTATAAAACCTAGAAAGACATGA 59.231 37.037 0.00 0.00 0.00 3.07
3304 7216 7.770897 AGCCACTATAAAACCTAGAAAGACATG 59.229 37.037 0.00 0.00 0.00 3.21
3305 7217 7.862675 AGCCACTATAAAACCTAGAAAGACAT 58.137 34.615 0.00 0.00 0.00 3.06
3306 7218 7.253905 AGCCACTATAAAACCTAGAAAGACA 57.746 36.000 0.00 0.00 0.00 3.41
3307 7219 7.414208 GCAAGCCACTATAAAACCTAGAAAGAC 60.414 40.741 0.00 0.00 0.00 3.01
3308 7220 6.598064 GCAAGCCACTATAAAACCTAGAAAGA 59.402 38.462 0.00 0.00 0.00 2.52
3309 7221 6.183360 GGCAAGCCACTATAAAACCTAGAAAG 60.183 42.308 6.14 0.00 35.81 2.62
3310 7222 5.650703 GGCAAGCCACTATAAAACCTAGAAA 59.349 40.000 6.14 0.00 35.81 2.52
3311 7223 5.190677 GGCAAGCCACTATAAAACCTAGAA 58.809 41.667 6.14 0.00 35.81 2.10
3312 7224 4.226394 TGGCAAGCCACTATAAAACCTAGA 59.774 41.667 10.24 0.00 41.89 2.43
3313 7225 4.523083 TGGCAAGCCACTATAAAACCTAG 58.477 43.478 10.24 0.00 41.89 3.02
3314 7226 4.577988 TGGCAAGCCACTATAAAACCTA 57.422 40.909 10.24 0.00 41.89 3.08
3315 7227 3.449746 TGGCAAGCCACTATAAAACCT 57.550 42.857 10.24 0.00 41.89 3.50
3327 7239 1.245732 GATGATGAGGATGGCAAGCC 58.754 55.000 3.61 3.61 0.00 4.35
3328 7240 1.977056 TGATGATGAGGATGGCAAGC 58.023 50.000 0.00 0.00 0.00 4.01
3329 7241 3.082548 GGATGATGATGAGGATGGCAAG 58.917 50.000 0.00 0.00 0.00 4.01
3330 7242 2.224942 GGGATGATGATGAGGATGGCAA 60.225 50.000 0.00 0.00 0.00 4.52
3331 7243 1.353358 GGGATGATGATGAGGATGGCA 59.647 52.381 0.00 0.00 0.00 4.92
3332 7244 1.353358 TGGGATGATGATGAGGATGGC 59.647 52.381 0.00 0.00 0.00 4.40
3333 7245 3.329814 TCTTGGGATGATGATGAGGATGG 59.670 47.826 0.00 0.00 0.00 3.51
3334 7246 4.635699 TCTTGGGATGATGATGAGGATG 57.364 45.455 0.00 0.00 0.00 3.51
3335 7247 4.850386 TGATCTTGGGATGATGATGAGGAT 59.150 41.667 0.00 0.00 31.46 3.24
3336 7248 4.237018 TGATCTTGGGATGATGATGAGGA 58.763 43.478 0.00 0.00 31.46 3.71
3337 7249 4.635699 TGATCTTGGGATGATGATGAGG 57.364 45.455 0.00 0.00 31.46 3.86
3338 7250 5.561679 ACATGATCTTGGGATGATGATGAG 58.438 41.667 12.76 0.00 43.16 2.90
3339 7251 5.072600 TGACATGATCTTGGGATGATGATGA 59.927 40.000 12.76 0.00 43.16 2.92
3340 7252 5.313712 TGACATGATCTTGGGATGATGATG 58.686 41.667 12.76 0.00 43.16 3.07
3341 7253 5.578157 TGACATGATCTTGGGATGATGAT 57.422 39.130 12.76 0.00 43.16 2.45
3342 7254 5.578157 ATGACATGATCTTGGGATGATGA 57.422 39.130 12.76 0.00 43.16 2.92
3343 7255 6.650427 AAATGACATGATCTTGGGATGATG 57.350 37.500 12.76 4.42 45.00 3.07
3344 7256 6.837048 TGAAAATGACATGATCTTGGGATGAT 59.163 34.615 12.76 0.00 31.46 2.45
3345 7257 6.189133 TGAAAATGACATGATCTTGGGATGA 58.811 36.000 12.76 0.00 31.46 2.92
3346 7258 6.459670 TGAAAATGACATGATCTTGGGATG 57.540 37.500 12.76 1.38 31.46 3.51
3347 7259 6.267014 GGATGAAAATGACATGATCTTGGGAT 59.733 38.462 12.76 2.00 34.45 3.85
3348 7260 5.595542 GGATGAAAATGACATGATCTTGGGA 59.404 40.000 12.76 0.00 0.00 4.37
3349 7261 5.597182 AGGATGAAAATGACATGATCTTGGG 59.403 40.000 12.76 0.00 0.00 4.12
3350 7262 6.710597 AGGATGAAAATGACATGATCTTGG 57.289 37.500 12.76 0.00 0.00 3.61
3351 7263 7.701078 GTCAAGGATGAAAATGACATGATCTTG 59.299 37.037 0.00 7.04 41.35 3.02
3352 7264 7.147949 GGTCAAGGATGAAAATGACATGATCTT 60.148 37.037 0.00 0.00 43.02 2.40
3353 7265 6.320672 GGTCAAGGATGAAAATGACATGATCT 59.679 38.462 0.00 0.00 43.02 2.75
3354 7266 6.320672 AGGTCAAGGATGAAAATGACATGATC 59.679 38.462 0.00 0.00 43.02 2.92
3355 7267 6.192773 AGGTCAAGGATGAAAATGACATGAT 58.807 36.000 0.00 0.00 43.02 2.45
3356 7268 5.573219 AGGTCAAGGATGAAAATGACATGA 58.427 37.500 0.00 0.00 43.02 3.07
3357 7269 5.909621 AGGTCAAGGATGAAAATGACATG 57.090 39.130 7.03 0.00 43.02 3.21
3358 7270 7.286316 GGATTAGGTCAAGGATGAAAATGACAT 59.714 37.037 7.03 2.56 43.02 3.06
3359 7271 6.603201 GGATTAGGTCAAGGATGAAAATGACA 59.397 38.462 7.03 0.00 43.02 3.58
3360 7272 6.603201 TGGATTAGGTCAAGGATGAAAATGAC 59.397 38.462 0.00 0.00 41.06 3.06
3361 7273 6.730447 TGGATTAGGTCAAGGATGAAAATGA 58.270 36.000 0.00 0.00 37.30 2.57
3362 7274 7.408756 TTGGATTAGGTCAAGGATGAAAATG 57.591 36.000 0.00 0.00 37.30 2.32
3363 7275 9.887862 ATATTGGATTAGGTCAAGGATGAAAAT 57.112 29.630 0.00 0.00 37.30 1.82
3364 7276 9.713684 AATATTGGATTAGGTCAAGGATGAAAA 57.286 29.630 0.00 0.00 37.30 2.29
3365 7277 9.354673 GAATATTGGATTAGGTCAAGGATGAAA 57.645 33.333 0.00 0.00 37.30 2.69
3366 7278 8.727149 AGAATATTGGATTAGGTCAAGGATGAA 58.273 33.333 0.00 0.00 37.30 2.57
3367 7279 8.280258 AGAATATTGGATTAGGTCAAGGATGA 57.720 34.615 0.00 0.00 0.00 2.92
3368 7280 8.930846 AAGAATATTGGATTAGGTCAAGGATG 57.069 34.615 0.00 0.00 0.00 3.51
3369 7281 9.942526 AAAAGAATATTGGATTAGGTCAAGGAT 57.057 29.630 0.00 0.00 0.00 3.24
3370 7282 9.768215 AAAAAGAATATTGGATTAGGTCAAGGA 57.232 29.630 0.00 0.00 0.00 3.36
3376 7288 9.868160 CCCTAGAAAAAGAATATTGGATTAGGT 57.132 33.333 0.00 0.00 0.00 3.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.