Multiple sequence alignment - TraesCS7D01G211200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G211200 chr7D 100.000 4973 0 0 1 4973 169413823 169418795 0.000000e+00 9184.0
1 TraesCS7D01G211200 chr7D 87.147 1097 84 37 3589 4654 169538235 169539305 0.000000e+00 1192.0
2 TraesCS7D01G211200 chr7D 90.431 836 54 8 4011 4838 169427839 169428656 0.000000e+00 1077.0
3 TraesCS7D01G211200 chr7D 88.304 513 43 8 3597 4104 169480488 169480988 2.560000e-167 599.0
4 TraesCS7D01G211200 chr7D 88.509 409 36 9 3597 3999 169427393 169427796 7.480000e-133 484.0
5 TraesCS7D01G211200 chr7D 84.034 476 28 24 4542 4973 169482856 169483327 9.960000e-112 414.0
6 TraesCS7D01G211200 chr7A 94.715 1911 66 17 2719 4606 171434435 171436333 0.000000e+00 2937.0
7 TraesCS7D01G211200 chr7A 92.736 1060 65 7 1595 2651 171433400 171434450 0.000000e+00 1520.0
8 TraesCS7D01G211200 chr7A 85.849 1272 110 38 3617 4838 171552117 171553368 0.000000e+00 1288.0
9 TraesCS7D01G211200 chr7A 92.680 765 35 10 845 1590 171432404 171433166 0.000000e+00 1083.0
10 TraesCS7D01G211200 chr7A 84.975 599 69 12 251 834 171416727 171417319 5.550000e-164 588.0
11 TraesCS7D01G211200 chr7A 82.812 448 44 16 4396 4838 171944589 171945008 2.190000e-98 370.0
12 TraesCS7D01G211200 chr7A 87.273 165 17 2 4677 4838 166874622 166874459 8.500000e-43 185.0
13 TraesCS7D01G211200 chr7A 94.215 121 7 0 3500 3620 171551919 171552039 8.500000e-43 185.0
14 TraesCS7D01G211200 chr7A 91.176 136 11 1 4833 4968 171436640 171436774 3.060000e-42 183.0
15 TraesCS7D01G211200 chr7A 91.589 107 9 0 4866 4972 166593649 166593755 1.120000e-31 148.0
16 TraesCS7D01G211200 chr7A 86.508 126 6 4 4833 4947 171945041 171945166 1.450000e-25 128.0
17 TraesCS7D01G211200 chr7B 95.534 1769 59 11 2719 4479 134630262 134632018 0.000000e+00 2811.0
18 TraesCS7D01G211200 chr7B 91.001 1978 119 30 695 2651 134628339 134630278 0.000000e+00 2612.0
19 TraesCS7D01G211200 chr7B 85.312 497 66 5 197 691 134627777 134628268 1.600000e-139 507.0
20 TraesCS7D01G211200 chr7B 85.772 246 12 6 4534 4774 134632023 134632250 6.430000e-59 239.0
21 TraesCS7D01G211200 chr7B 91.613 155 9 3 4687 4838 128441920 128441767 1.400000e-50 211.0
22 TraesCS7D01G211200 chr7B 91.346 104 9 0 1 104 134627002 134627105 5.190000e-30 143.0
23 TraesCS7D01G211200 chr7B 98.649 74 0 1 2644 2716 749558857 749558784 4.040000e-26 130.0
24 TraesCS7D01G211200 chr7B 87.963 108 13 0 4866 4973 134494368 134494261 1.450000e-25 128.0
25 TraesCS7D01G211200 chr7B 95.522 67 1 1 4774 4838 134633450 134633516 6.810000e-19 106.0
26 TraesCS7D01G211200 chr6A 88.691 1123 82 20 3597 4679 124427148 124426031 0.000000e+00 1328.0
27 TraesCS7D01G211200 chr6A 86.999 1123 84 25 3597 4679 124913540 124914640 0.000000e+00 1208.0
28 TraesCS7D01G211200 chr6A 89.348 798 52 17 3500 4270 124314053 124313262 0.000000e+00 972.0
29 TraesCS7D01G211200 chr6A 84.800 250 29 8 4731 4973 124426017 124425770 4.970000e-60 243.0
30 TraesCS7D01G211200 chr6A 84.898 245 29 7 4735 4973 124914659 124914901 1.790000e-59 241.0
31 TraesCS7D01G211200 chrUn 85.849 1272 110 38 3617 4838 82710060 82711311 0.000000e+00 1288.0
32 TraesCS7D01G211200 chrUn 88.165 583 40 13 3821 4374 293555437 293554855 0.000000e+00 667.0
33 TraesCS7D01G211200 chrUn 88.165 583 40 13 3821 4374 314488199 314487617 0.000000e+00 667.0
34 TraesCS7D01G211200 chrUn 82.921 445 43 16 4399 4838 293554728 293554312 2.190000e-98 370.0
35 TraesCS7D01G211200 chrUn 82.921 445 43 16 4399 4838 314487490 314487074 2.190000e-98 370.0
36 TraesCS7D01G211200 chrUn 82.812 448 44 16 4396 4838 325382241 325382660 2.190000e-98 370.0
37 TraesCS7D01G211200 chrUn 94.215 121 7 0 3500 3620 82709862 82709982 8.500000e-43 185.0
38 TraesCS7D01G211200 chrUn 87.500 120 4 4 4839 4947 293554273 293554154 1.450000e-25 128.0
39 TraesCS7D01G211200 chrUn 87.500 120 4 4 4839 4947 314487035 314486916 1.450000e-25 128.0
40 TraesCS7D01G211200 chrUn 86.508 126 6 4 4833 4947 325382693 325382818 1.450000e-25 128.0
41 TraesCS7D01G211200 chr6D 91.189 227 12 5 4427 4646 103036697 103036472 8.090000e-78 302.0
42 TraesCS7D01G211200 chr5D 80.435 138 21 3 419 556 459239935 459239804 3.170000e-17 100.0
43 TraesCS7D01G211200 chr5A 80.303 132 20 3 421 552 578825196 578825071 1.470000e-15 95.3
44 TraesCS7D01G211200 chr5A 94.340 53 2 1 2645 2697 569164341 569164392 4.130000e-11 80.5
45 TraesCS7D01G211200 chr4A 96.970 33 1 0 345 377 88086248 88086280 6.950000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G211200 chr7D 169413823 169418795 4972 False 9184.000000 9184 100.000000 1 4973 1 chr7D.!!$F1 4972
1 TraesCS7D01G211200 chr7D 169538235 169539305 1070 False 1192.000000 1192 87.147000 3589 4654 1 chr7D.!!$F2 1065
2 TraesCS7D01G211200 chr7D 169427393 169428656 1263 False 780.500000 1077 89.470000 3597 4838 2 chr7D.!!$F3 1241
3 TraesCS7D01G211200 chr7D 169480488 169483327 2839 False 506.500000 599 86.169000 3597 4973 2 chr7D.!!$F4 1376
4 TraesCS7D01G211200 chr7A 171432404 171436774 4370 False 1430.750000 2937 92.826750 845 4968 4 chr7A.!!$F3 4123
5 TraesCS7D01G211200 chr7A 171551919 171553368 1449 False 736.500000 1288 90.032000 3500 4838 2 chr7A.!!$F4 1338
6 TraesCS7D01G211200 chr7A 171416727 171417319 592 False 588.000000 588 84.975000 251 834 1 chr7A.!!$F2 583
7 TraesCS7D01G211200 chr7A 171944589 171945166 577 False 249.000000 370 84.660000 4396 4947 2 chr7A.!!$F5 551
8 TraesCS7D01G211200 chr7B 134627002 134633516 6514 False 1069.666667 2811 90.747833 1 4838 6 chr7B.!!$F1 4837
9 TraesCS7D01G211200 chr6A 124313262 124314053 791 True 972.000000 972 89.348000 3500 4270 1 chr6A.!!$R1 770
10 TraesCS7D01G211200 chr6A 124425770 124427148 1378 True 785.500000 1328 86.745500 3597 4973 2 chr6A.!!$R2 1376
11 TraesCS7D01G211200 chr6A 124913540 124914901 1361 False 724.500000 1208 85.948500 3597 4973 2 chr6A.!!$F1 1376
12 TraesCS7D01G211200 chrUn 82709862 82711311 1449 False 736.500000 1288 90.032000 3500 4838 2 chrUn.!!$F1 1338
13 TraesCS7D01G211200 chrUn 293554154 293555437 1283 True 388.333333 667 86.195333 3821 4947 3 chrUn.!!$R1 1126
14 TraesCS7D01G211200 chrUn 314486916 314488199 1283 True 388.333333 667 86.195333 3821 4947 3 chrUn.!!$R2 1126
15 TraesCS7D01G211200 chrUn 325382241 325382818 577 False 249.000000 370 84.660000 4396 4947 2 chrUn.!!$F2 551

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
177 178 0.028770 ACGTCATTGTGTGTTTGCCG 59.971 50.0 0.0 0.0 0.0 5.69 F
178 179 0.028770 CGTCATTGTGTGTTTGCCGT 59.971 50.0 0.0 0.0 0.0 5.68 F
180 181 0.248825 TCATTGTGTGTTTGCCGTGC 60.249 50.0 0.0 0.0 0.0 5.34 F
1518 2178 0.325671 AGAGAAATGGCGAGGGAGGA 60.326 55.0 0.0 0.0 0.0 3.71 F
1519 2179 0.541863 GAGAAATGGCGAGGGAGGAA 59.458 55.0 0.0 0.0 0.0 3.36 F
1571 2244 0.608130 CTCGGACTGGAATGGTGTGA 59.392 55.0 0.0 0.0 0.0 3.58 F
3157 4072 0.249447 CTGTTGTGTCGGCAGTCTCA 60.249 55.0 0.0 0.0 0.0 3.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2049 2961 0.039035 AAAATCGGGTAGCAAGGGCA 59.961 50.000 0.00 0.00 44.61 5.36 R
2174 3087 1.009829 CCAACATAGTCTGCGCTTCC 58.990 55.000 9.73 0.00 0.00 3.46 R
2198 3111 5.907197 AGCGTATGATATTGAAAAGGTCG 57.093 39.130 0.00 0.00 0.00 4.79 R
3006 3920 0.251341 ACCTGACATCCAACAAGGGC 60.251 55.000 0.00 0.00 38.24 5.19 R
3117 4032 2.415512 GCTACGACAACCACCTGATTTC 59.584 50.000 0.00 0.00 0.00 2.17 R
3228 4143 4.697514 AGGAAACGATGACATCATACTGG 58.302 43.478 15.58 0.69 36.57 4.00 R
4850 9153 0.249280 CAGTTGTTCGGTTTTGGCCC 60.249 55.000 0.00 0.00 0.00 5.80 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 0.965439 GTGATGGGGATCTCCTCTCG 59.035 60.000 14.22 0.00 37.41 4.04
48 49 0.538516 ATGGGGATCTCCTCTCGTCG 60.539 60.000 14.22 0.00 37.41 5.12
50 51 0.752376 GGGGATCTCCTCTCGTCGTT 60.752 60.000 3.62 0.00 32.35 3.85
52 53 1.380524 GGATCTCCTCTCGTCGTTGA 58.619 55.000 0.00 0.00 0.00 3.18
53 54 1.950909 GGATCTCCTCTCGTCGTTGAT 59.049 52.381 0.00 0.00 0.00 2.57
66 67 0.390603 CGTTGATAGGGGTTGCGTCA 60.391 55.000 0.00 0.00 0.00 4.35
104 105 2.814835 GGGGGTGTGGAAGTCGTGT 61.815 63.158 0.00 0.00 0.00 4.49
106 107 1.444250 GGGTGTGGAAGTCGTGTGA 59.556 57.895 0.00 0.00 0.00 3.58
110 111 1.792949 GTGTGGAAGTCGTGTGATGTC 59.207 52.381 0.00 0.00 0.00 3.06
112 113 2.102420 TGTGGAAGTCGTGTGATGTCTT 59.898 45.455 0.00 0.00 0.00 3.01
113 114 2.731976 GTGGAAGTCGTGTGATGTCTTC 59.268 50.000 0.00 0.00 35.29 2.87
114 115 1.986378 GGAAGTCGTGTGATGTCTTCG 59.014 52.381 0.00 0.00 36.41 3.79
115 116 1.986378 GAAGTCGTGTGATGTCTTCGG 59.014 52.381 0.00 0.00 0.00 4.30
116 117 1.244816 AGTCGTGTGATGTCTTCGGA 58.755 50.000 0.00 0.00 0.00 4.55
117 118 1.611977 AGTCGTGTGATGTCTTCGGAA 59.388 47.619 0.00 0.00 0.00 4.30
118 119 2.035449 AGTCGTGTGATGTCTTCGGAAA 59.965 45.455 0.00 0.00 0.00 3.13
119 120 2.798283 GTCGTGTGATGTCTTCGGAAAA 59.202 45.455 0.00 0.00 0.00 2.29
120 121 3.246699 GTCGTGTGATGTCTTCGGAAAAA 59.753 43.478 0.00 0.00 0.00 1.94
145 146 7.899178 ATTGTCATAGTTCGTGTGTTATGAA 57.101 32.000 0.00 0.00 35.12 2.57
149 150 2.423577 AGTTCGTGTGTTATGAAGGGC 58.576 47.619 0.00 0.00 35.06 5.19
150 151 2.147958 GTTCGTGTGTTATGAAGGGCA 58.852 47.619 0.00 0.00 35.06 5.36
151 152 2.093306 TCGTGTGTTATGAAGGGCAG 57.907 50.000 0.00 0.00 0.00 4.85
152 153 0.447801 CGTGTGTTATGAAGGGCAGC 59.552 55.000 0.00 0.00 0.00 5.25
153 154 0.447801 GTGTGTTATGAAGGGCAGCG 59.552 55.000 0.00 0.00 0.00 5.18
154 155 0.036164 TGTGTTATGAAGGGCAGCGT 59.964 50.000 0.00 0.00 0.00 5.07
155 156 0.447801 GTGTTATGAAGGGCAGCGTG 59.552 55.000 0.00 0.00 0.00 5.34
156 157 0.036164 TGTTATGAAGGGCAGCGTGT 59.964 50.000 0.00 0.00 0.00 4.49
157 158 0.447801 GTTATGAAGGGCAGCGTGTG 59.552 55.000 0.00 0.00 0.00 3.82
158 159 0.323302 TTATGAAGGGCAGCGTGTGA 59.677 50.000 0.00 0.00 0.00 3.58
159 160 0.391130 TATGAAGGGCAGCGTGTGAC 60.391 55.000 0.00 0.00 0.00 3.67
160 161 3.414700 GAAGGGCAGCGTGTGACG 61.415 66.667 0.00 0.00 45.88 4.35
161 162 4.235762 AAGGGCAGCGTGTGACGT 62.236 61.111 0.00 0.00 44.73 4.34
162 163 4.664677 AGGGCAGCGTGTGACGTC 62.665 66.667 9.11 9.11 44.73 4.34
163 164 4.961511 GGGCAGCGTGTGACGTCA 62.962 66.667 15.76 15.76 44.73 4.35
164 165 2.738521 GGCAGCGTGTGACGTCAT 60.739 61.111 23.12 1.39 44.73 3.06
165 166 2.317609 GGCAGCGTGTGACGTCATT 61.318 57.895 23.12 2.67 44.73 2.57
167 168 1.831389 GCAGCGTGTGACGTCATTGT 61.831 55.000 23.12 2.23 44.73 2.71
168 169 0.111134 CAGCGTGTGACGTCATTGTG 60.111 55.000 23.12 12.97 44.73 3.33
169 170 0.529773 AGCGTGTGACGTCATTGTGT 60.530 50.000 23.12 4.15 44.73 3.72
170 171 0.383002 GCGTGTGACGTCATTGTGTG 60.383 55.000 23.12 9.81 44.73 3.82
171 172 0.927537 CGTGTGACGTCATTGTGTGT 59.072 50.000 23.12 0.00 36.74 3.72
173 174 2.222931 CGTGTGACGTCATTGTGTGTTT 60.223 45.455 23.12 0.00 36.74 2.83
174 175 3.097910 GTGTGACGTCATTGTGTGTTTG 58.902 45.455 23.12 0.00 0.00 2.93
175 176 2.108700 GTGACGTCATTGTGTGTTTGC 58.891 47.619 23.12 0.00 0.00 3.68
176 177 1.064803 TGACGTCATTGTGTGTTTGCC 59.935 47.619 15.76 0.00 0.00 4.52
177 178 0.028770 ACGTCATTGTGTGTTTGCCG 59.971 50.000 0.00 0.00 0.00 5.69
178 179 0.028770 CGTCATTGTGTGTTTGCCGT 59.971 50.000 0.00 0.00 0.00 5.68
179 180 1.476074 GTCATTGTGTGTTTGCCGTG 58.524 50.000 0.00 0.00 0.00 4.94
180 181 0.248825 TCATTGTGTGTTTGCCGTGC 60.249 50.000 0.00 0.00 0.00 5.34
182 183 1.999071 ATTGTGTGTTTGCCGTGCGT 61.999 50.000 0.00 0.00 0.00 5.24
183 184 2.650602 GTGTGTTTGCCGTGCGTG 60.651 61.111 0.00 0.00 0.00 5.34
184 185 3.882013 TGTGTTTGCCGTGCGTGG 61.882 61.111 0.00 0.00 0.00 4.94
185 186 3.883180 GTGTTTGCCGTGCGTGGT 61.883 61.111 0.00 0.00 0.00 4.16
186 187 3.134792 TGTTTGCCGTGCGTGGTT 61.135 55.556 0.00 0.00 0.00 3.67
188 189 2.824489 TTTGCCGTGCGTGGTTGA 60.824 55.556 0.00 0.00 0.00 3.18
189 190 2.190170 TTTGCCGTGCGTGGTTGAT 61.190 52.632 0.00 0.00 0.00 2.57
190 191 2.123988 TTTGCCGTGCGTGGTTGATC 62.124 55.000 0.00 0.00 0.00 2.92
191 192 3.047280 GCCGTGCGTGGTTGATCA 61.047 61.111 0.00 0.00 0.00 2.92
192 193 2.860293 CCGTGCGTGGTTGATCAC 59.140 61.111 0.00 0.00 0.00 3.06
202 782 4.749245 GTGGTTGATCACGACATTTCTT 57.251 40.909 0.00 0.00 34.32 2.52
204 784 5.147162 GTGGTTGATCACGACATTTCTTTC 58.853 41.667 0.00 0.00 34.32 2.62
215 795 8.307483 TCACGACATTTCTTTCTCTTATCTTCT 58.693 33.333 0.00 0.00 0.00 2.85
218 798 9.965748 CGACATTTCTTTCTCTTATCTTCTTTC 57.034 33.333 0.00 0.00 0.00 2.62
253 833 4.539870 CTGTGTGCACCTAAAATGTCTTG 58.460 43.478 15.69 0.00 0.00 3.02
264 844 9.912634 CACCTAAAATGTCTTGACATTGTATTT 57.087 29.630 24.11 17.82 39.92 1.40
300 880 8.458052 CAATACAATTACAAATGCTCACCTACA 58.542 33.333 0.00 0.00 0.00 2.74
302 882 5.106712 ACAATTACAAATGCTCACCTACACG 60.107 40.000 0.00 0.00 0.00 4.49
316 896 1.781429 CTACACGCATACACTCATCGC 59.219 52.381 0.00 0.00 0.00 4.58
332 912 1.123077 TCGCCACCTCTATGAGCATT 58.877 50.000 0.00 0.00 0.00 3.56
334 914 2.092968 TCGCCACCTCTATGAGCATTTT 60.093 45.455 0.00 0.00 0.00 1.82
346 926 5.885230 ATGAGCATTTTTGAGACATCGAA 57.115 34.783 0.00 0.00 0.00 3.71
350 930 3.120338 GCATTTTTGAGACATCGAACCGA 60.120 43.478 0.00 0.00 41.13 4.69
364 944 2.542178 CGAACCGACACAACATCTTGAA 59.458 45.455 0.00 0.00 0.00 2.69
368 948 6.565060 CGAACCGACACAACATCTTGAAATTA 60.565 38.462 0.00 0.00 0.00 1.40
371 951 6.038825 ACCGACACAACATCTTGAAATTAACA 59.961 34.615 0.00 0.00 0.00 2.41
378 958 9.301153 ACAACATCTTGAAATTAACAAAGTCAC 57.699 29.630 0.00 0.00 0.00 3.67
380 960 7.138736 ACATCTTGAAATTAACAAAGTCACCG 58.861 34.615 0.00 0.00 0.00 4.94
381 961 5.516090 TCTTGAAATTAACAAAGTCACCGC 58.484 37.500 0.00 0.00 0.00 5.68
388 968 2.669569 AAAGTCACCGCATGCGCT 60.670 55.556 34.00 22.17 38.24 5.92
404 984 2.259618 GCGCTTTGTAGTCGATGAGAA 58.740 47.619 0.00 0.00 0.00 2.87
406 986 3.242518 CGCTTTGTAGTCGATGAGAACA 58.757 45.455 0.00 0.00 0.00 3.18
408 988 4.327357 CGCTTTGTAGTCGATGAGAACATT 59.673 41.667 0.00 0.00 36.82 2.71
416 996 6.099579 AGTCGATGAGAACATTTCATTTCG 57.900 37.500 0.00 0.00 35.50 3.46
436 1016 2.550978 GATGAACGAACATCATCGGGT 58.449 47.619 16.74 0.00 46.82 5.28
452 1032 7.361457 TCATCGGGTAGTCTGAAATAAATCT 57.639 36.000 0.00 0.00 33.91 2.40
480 1061 1.264020 GCGAGCACAAGTGTCAAATCA 59.736 47.619 1.79 0.00 0.00 2.57
515 1096 3.188880 ACCATGGTGGATTGGTTTCAT 57.811 42.857 18.99 0.00 43.73 2.57
527 1108 6.314896 TGGATTGGTTTCATCACAAAAACAAC 59.685 34.615 1.54 0.00 43.79 3.32
531 1112 9.612066 ATTGGTTTCATCACAAAAACAACTAAT 57.388 25.926 1.54 0.00 43.79 1.73
543 1124 5.886960 AAACAACTAATCATCTGAGCCAC 57.113 39.130 0.00 0.00 0.00 5.01
570 1151 6.514947 TCAGTTTGCAAATGTCTTAGCATTT 58.485 32.000 16.21 8.17 46.37 2.32
581 1162 6.586868 TGTCTTAGCATTTTTGTTTTGCTG 57.413 33.333 6.89 0.00 45.76 4.41
582 1163 6.105333 TGTCTTAGCATTTTTGTTTTGCTGT 58.895 32.000 6.89 0.00 45.76 4.40
584 1165 6.255453 GTCTTAGCATTTTTGTTTTGCTGTGA 59.745 34.615 6.89 2.70 45.76 3.58
596 1177 0.392706 TGCTGTGAGTGGTTGATCGT 59.607 50.000 0.00 0.00 0.00 3.73
641 1224 3.056465 TCTTTTTGTCTTTTTGGCCGTGT 60.056 39.130 0.00 0.00 0.00 4.49
642 1225 2.285827 TTTGTCTTTTTGGCCGTGTG 57.714 45.000 0.00 0.00 0.00 3.82
655 1238 1.401018 GCCGTGTGCACCTAAAATGTC 60.401 52.381 15.69 0.00 40.77 3.06
661 1244 3.568007 TGTGCACCTAAAATGTCTTGACC 59.432 43.478 15.69 0.00 0.00 4.02
747 1397 1.134220 CGAGCCCTATGCCCTTACAAA 60.134 52.381 0.00 0.00 42.71 2.83
751 1401 2.628178 GCCCTATGCCCTTACAAAATCC 59.372 50.000 0.00 0.00 0.00 3.01
753 1403 4.285863 CCCTATGCCCTTACAAAATCCAA 58.714 43.478 0.00 0.00 0.00 3.53
754 1404 4.714308 CCCTATGCCCTTACAAAATCCAAA 59.286 41.667 0.00 0.00 0.00 3.28
790 1440 4.728917 TTTACCACGTGTATGAAAACCG 57.271 40.909 15.65 0.00 0.00 4.44
792 1442 1.868498 ACCACGTGTATGAAAACCGTG 59.132 47.619 15.65 0.00 46.09 4.94
803 1453 4.879104 TGAAAACCGTGAAATACAACGT 57.121 36.364 0.00 0.00 0.00 3.99
939 1593 0.975556 TCGCCATCCACTCCTGCTAA 60.976 55.000 0.00 0.00 0.00 3.09
1008 1662 3.496875 CTCCGGCGAGATGCTCCTG 62.497 68.421 9.30 0.00 45.43 3.86
1089 1743 2.685380 CCTCGCCACCTCCCTCTT 60.685 66.667 0.00 0.00 0.00 2.85
1122 1776 1.340405 ACTACGCCCTTACCGAGAAGA 60.340 52.381 0.00 0.00 0.00 2.87
1356 2016 2.176546 CGGAAGGCGACGTCGTTA 59.823 61.111 35.48 0.00 40.00 3.18
1433 2093 2.420466 GGACGTATTCGGCTCCCC 59.580 66.667 0.00 0.00 45.51 4.81
1435 2095 2.364579 ACGTATTCGGCTCCCCCA 60.365 61.111 0.00 0.00 41.85 4.96
1452 2112 2.358090 CCCCACCCTGCATTTCTGATAA 60.358 50.000 0.00 0.00 0.00 1.75
1453 2113 2.954318 CCCACCCTGCATTTCTGATAAG 59.046 50.000 0.00 0.00 0.00 1.73
1455 2115 2.954318 CACCCTGCATTTCTGATAAGGG 59.046 50.000 3.98 3.98 40.93 3.95
1466 2126 5.707242 TTCTGATAAGGGTATCTACTGCG 57.293 43.478 0.00 0.00 37.58 5.18
1515 2175 0.826715 CAGAGAGAAATGGCGAGGGA 59.173 55.000 0.00 0.00 0.00 4.20
1516 2176 1.118838 AGAGAGAAATGGCGAGGGAG 58.881 55.000 0.00 0.00 0.00 4.30
1518 2178 0.325671 AGAGAAATGGCGAGGGAGGA 60.326 55.000 0.00 0.00 0.00 3.71
1519 2179 0.541863 GAGAAATGGCGAGGGAGGAA 59.458 55.000 0.00 0.00 0.00 3.36
1523 2191 1.216990 AATGGCGAGGGAGGAATCTT 58.783 50.000 0.00 0.00 0.00 2.40
1533 2201 5.568423 CGAGGGAGGAATCTTTCATATCTGG 60.568 48.000 0.00 0.00 0.00 3.86
1535 2203 4.263683 GGGAGGAATCTTTCATATCTGGGG 60.264 50.000 0.00 0.00 0.00 4.96
1536 2204 4.599241 GGAGGAATCTTTCATATCTGGGGA 59.401 45.833 0.00 0.00 0.00 4.81
1571 2244 0.608130 CTCGGACTGGAATGGTGTGA 59.392 55.000 0.00 0.00 0.00 3.58
1584 2257 8.279970 TGGAATGGTGTGAGTTATTTCAATAG 57.720 34.615 0.00 0.00 0.00 1.73
1590 2263 6.801862 GGTGTGAGTTATTTCAATAGCACAAC 59.198 38.462 0.00 0.00 34.34 3.32
1598 2500 6.956299 ATTTCAATAGCACAACAGAATTGC 57.044 33.333 0.00 0.00 36.45 3.56
1851 2758 2.638480 TCCTGGTATAGCATGCCAAC 57.362 50.000 15.66 10.07 44.60 3.77
1963 2875 5.598005 TCCATGCTCCATTTTCCGATTATTT 59.402 36.000 0.00 0.00 0.00 1.40
2014 2926 6.202954 ACAGTAGTGTCAGTTAGAAAATGTGC 59.797 38.462 0.00 0.00 26.76 4.57
2032 2944 9.491675 AAAATGTGCATACAATTTCAGATGAAA 57.508 25.926 10.23 10.23 42.09 2.69
2051 2963 9.341899 AGATGAAAAATACAAGTAAATTCGTGC 57.658 29.630 0.00 0.00 0.00 5.34
2055 2967 6.584185 AAATACAAGTAAATTCGTGCCCTT 57.416 33.333 0.00 0.00 0.00 3.95
2077 2989 5.554822 TGCTACCCGATTTTAAATGTGAC 57.445 39.130 0.00 0.00 0.00 3.67
2174 3087 6.089016 CAGCAAGCAACATTTCTATTGTCAAG 59.911 38.462 0.00 0.00 0.00 3.02
2198 3111 1.871080 CGCAGACTATGTTGGATCCC 58.129 55.000 9.90 0.00 0.00 3.85
2294 3207 4.929479 ACATGCAAGTTGTTATTAGGGGA 58.071 39.130 4.48 0.00 0.00 4.81
2384 3297 2.158769 TGGCCGTGCATCTTTCATATCT 60.159 45.455 0.00 0.00 0.00 1.98
2416 3329 7.604164 CACAGTAAGATCCTTTCTCAAGCTTAA 59.396 37.037 0.00 0.00 31.78 1.85
2433 3346 8.502738 TCAAGCTTAATCCATAAAGTATTCCCT 58.497 33.333 0.00 0.00 0.00 4.20
2484 3397 7.988737 TCAAACATATTCAGGTGATCATTGTC 58.011 34.615 0.00 0.00 0.00 3.18
2552 3465 3.119029 TGGCTTGGAGCATTTTTATCAGC 60.119 43.478 2.04 0.00 44.75 4.26
2605 3518 2.230508 TCTCCACCATGTGTAAGTCGAC 59.769 50.000 7.70 7.70 0.00 4.20
2633 3546 7.057894 TCTACATGTAAAGGTCCACAAGTTTT 58.942 34.615 7.06 0.00 30.10 2.43
2641 3554 4.600062 AGGTCCACAAGTTTTTCTGAACT 58.400 39.130 0.00 0.00 41.44 3.01
2666 3579 2.559698 TTTTCGAACCATGCAGGAGA 57.440 45.000 0.00 0.00 41.22 3.71
2667 3580 2.559698 TTTCGAACCATGCAGGAGAA 57.440 45.000 0.00 4.57 41.22 2.87
2668 3581 1.808411 TTCGAACCATGCAGGAGAAC 58.192 50.000 0.00 0.00 41.22 3.01
2669 3582 0.976641 TCGAACCATGCAGGAGAACT 59.023 50.000 0.00 0.00 41.22 3.01
2707 3620 5.838531 AAGATAGAGAGGGAGTACAAACG 57.161 43.478 0.00 0.00 0.00 3.60
2708 3621 5.113446 AGATAGAGAGGGAGTACAAACGA 57.887 43.478 0.00 0.00 0.00 3.85
2709 3622 4.883006 AGATAGAGAGGGAGTACAAACGAC 59.117 45.833 0.00 0.00 0.00 4.34
2710 3623 2.169330 AGAGAGGGAGTACAAACGACC 58.831 52.381 0.00 0.00 0.00 4.79
2711 3624 1.891150 GAGAGGGAGTACAAACGACCA 59.109 52.381 0.00 0.00 0.00 4.02
2712 3625 2.298163 GAGAGGGAGTACAAACGACCAA 59.702 50.000 0.00 0.00 0.00 3.67
2713 3626 2.701951 AGAGGGAGTACAAACGACCAAA 59.298 45.455 0.00 0.00 0.00 3.28
2714 3627 3.135167 AGAGGGAGTACAAACGACCAAAA 59.865 43.478 0.00 0.00 0.00 2.44
2715 3628 3.208594 AGGGAGTACAAACGACCAAAAC 58.791 45.455 0.00 0.00 0.00 2.43
2716 3629 3.118149 AGGGAGTACAAACGACCAAAACT 60.118 43.478 0.00 0.00 0.00 2.66
2717 3630 3.628942 GGGAGTACAAACGACCAAAACTT 59.371 43.478 0.00 0.00 0.00 2.66
2718 3631 4.096833 GGGAGTACAAACGACCAAAACTTT 59.903 41.667 0.00 0.00 0.00 2.66
2719 3632 5.268544 GGAGTACAAACGACCAAAACTTTC 58.731 41.667 0.00 0.00 0.00 2.62
2720 3633 5.065602 GGAGTACAAACGACCAAAACTTTCT 59.934 40.000 0.00 0.00 0.00 2.52
2721 3634 5.875930 AGTACAAACGACCAAAACTTTCTG 58.124 37.500 0.00 0.00 0.00 3.02
2722 3635 5.644636 AGTACAAACGACCAAAACTTTCTGA 59.355 36.000 0.00 0.00 0.00 3.27
2723 3636 5.379732 ACAAACGACCAAAACTTTCTGAA 57.620 34.783 0.00 0.00 0.00 3.02
2724 3637 5.158494 ACAAACGACCAAAACTTTCTGAAC 58.842 37.500 0.00 0.00 0.00 3.18
2725 3638 3.668596 ACGACCAAAACTTTCTGAACG 57.331 42.857 0.00 0.00 0.00 3.95
2726 3639 3.004862 ACGACCAAAACTTTCTGAACGT 58.995 40.909 0.00 0.00 0.00 3.99
2727 3640 3.437741 ACGACCAAAACTTTCTGAACGTT 59.562 39.130 0.00 0.00 0.00 3.99
2728 3641 4.083164 ACGACCAAAACTTTCTGAACGTTT 60.083 37.500 16.42 16.42 32.69 3.60
2729 3642 4.854839 CGACCAAAACTTTCTGAACGTTTT 59.145 37.500 23.77 23.77 40.36 2.43
2730 3643 5.343860 CGACCAAAACTTTCTGAACGTTTTT 59.656 36.000 25.73 17.12 38.40 1.94
2731 3644 6.523893 CGACCAAAACTTTCTGAACGTTTTTA 59.476 34.615 25.73 0.00 38.40 1.52
2781 3694 6.646653 TCTGTGTCAAGATTAGTGTGCTTTAG 59.353 38.462 0.00 0.00 0.00 1.85
2789 3702 9.334693 CAAGATTAGTGTGCTTTAGAATTTGAC 57.665 33.333 0.00 0.00 0.00 3.18
2823 3736 5.471456 AGTGTGCTTTAGAATTTGACCTCTG 59.529 40.000 0.00 0.00 0.00 3.35
2899 3813 5.357032 TGATTGATCTTGTCTCTGCGTACTA 59.643 40.000 0.00 0.00 0.00 1.82
2928 3842 1.186200 TGGTGATCTTCTGACCCTCG 58.814 55.000 0.00 0.00 0.00 4.63
3008 3922 9.494271 AAAATGAAGAAAGAAAATTTCCTAGCC 57.506 29.630 1.57 0.00 0.00 3.93
3034 3948 6.367374 TGTTGGATGTCAGGTTAGTTATCA 57.633 37.500 0.00 0.00 0.00 2.15
3081 3996 7.374272 TGCATTTATCTCGTGAAAATTTTCCA 58.626 30.769 24.51 12.27 36.36 3.53
3082 3997 7.328249 TGCATTTATCTCGTGAAAATTTTCCAC 59.672 33.333 24.51 20.10 36.36 4.02
3086 4001 8.795786 TTATCTCGTGAAAATTTTCCACTTTG 57.204 30.769 24.51 14.75 36.36 2.77
3092 4007 6.529829 CGTGAAAATTTTCCACTTTGTTCTCA 59.470 34.615 24.51 2.78 36.36 3.27
3117 4032 9.919348 CAATGAAGTGTTCTAAAAATTGGTTTG 57.081 29.630 0.00 0.00 0.00 2.93
3157 4072 0.249447 CTGTTGTGTCGGCAGTCTCA 60.249 55.000 0.00 0.00 0.00 3.27
3164 4079 3.056179 TGTGTCGGCAGTCTCATTCATTA 60.056 43.478 0.00 0.00 0.00 1.90
3228 4143 2.993899 CACGGACACCAACAGAGTTATC 59.006 50.000 0.00 0.00 0.00 1.75
3295 4210 3.181531 GCATAATCGCAACAACCTTTTGC 60.182 43.478 0.00 0.00 44.94 3.68
3361 4277 9.950680 TCTTTTCAGTTTGATGTCAAGTTTATC 57.049 29.630 0.00 0.00 37.15 1.75
3445 4362 5.939883 TGTATCAGCTACAGAAACTGCAATT 59.060 36.000 0.00 0.00 35.38 2.32
3696 4698 4.703379 TGGCCATCCAAGTTCAATTTTT 57.297 36.364 0.00 0.00 39.99 1.94
3872 4991 5.597182 AGTAGTTCCCACAGCGAGAATATTA 59.403 40.000 0.00 0.00 0.00 0.98
3877 4996 4.404394 TCCCACAGCGAGAATATTAACTCA 59.596 41.667 5.34 0.00 33.86 3.41
4010 5172 9.438291 CAAAATACGAGGATTTCACATGATAAC 57.562 33.333 0.00 0.00 0.00 1.89
4011 5173 8.731275 AAATACGAGGATTTCACATGATAACA 57.269 30.769 0.00 0.00 0.00 2.41
4012 5174 8.908786 AATACGAGGATTTCACATGATAACAT 57.091 30.769 0.00 0.00 37.19 2.71
4013 5175 9.996554 AATACGAGGATTTCACATGATAACATA 57.003 29.630 0.00 0.00 35.09 2.29
4109 5284 1.108727 TGGCCAGTTGCACAAGGAAG 61.109 55.000 0.00 0.00 43.89 3.46
4134 5312 2.772287 AGCTCACTAGGCTGACAAAAC 58.228 47.619 0.00 0.00 38.73 2.43
4274 5457 6.437793 GGGTAGCCTGATGTAGTATCAGTAAT 59.562 42.308 13.91 4.40 42.88 1.89
4373 5622 7.759489 TCTGCATCAACCTTTGTTTTAGTAT 57.241 32.000 0.00 0.00 30.42 2.12
4480 5794 2.162681 GAACTGCACCTGGTATGCTTT 58.837 47.619 10.23 4.23 43.77 3.51
4607 7642 6.017852 AGCAAGAAGTAGAGCAACAGTTTTAC 60.018 38.462 0.00 0.00 0.00 2.01
4628 7670 0.592637 TTGCATGAACAAGTGGAGCG 59.407 50.000 0.00 0.00 0.00 5.03
4631 7673 1.266718 GCATGAACAAGTGGAGCGAAA 59.733 47.619 0.00 0.00 0.00 3.46
4679 7721 3.181433 CCTTGTACCCCTTTCAACTCCTT 60.181 47.826 0.00 0.00 0.00 3.36
4680 7722 3.782656 TGTACCCCTTTCAACTCCTTC 57.217 47.619 0.00 0.00 0.00 3.46
4681 7723 3.323775 TGTACCCCTTTCAACTCCTTCT 58.676 45.455 0.00 0.00 0.00 2.85
4682 7724 4.495565 TGTACCCCTTTCAACTCCTTCTA 58.504 43.478 0.00 0.00 0.00 2.10
4683 7725 5.098663 TGTACCCCTTTCAACTCCTTCTAT 58.901 41.667 0.00 0.00 0.00 1.98
4684 7726 4.846168 ACCCCTTTCAACTCCTTCTATC 57.154 45.455 0.00 0.00 0.00 2.08
4685 7727 4.175962 ACCCCTTTCAACTCCTTCTATCA 58.824 43.478 0.00 0.00 0.00 2.15
4686 7728 4.790790 ACCCCTTTCAACTCCTTCTATCAT 59.209 41.667 0.00 0.00 0.00 2.45
4687 7729 5.254032 ACCCCTTTCAACTCCTTCTATCATT 59.746 40.000 0.00 0.00 0.00 2.57
4688 7730 6.190587 CCCCTTTCAACTCCTTCTATCATTT 58.809 40.000 0.00 0.00 0.00 2.32
4689 7731 6.319911 CCCCTTTCAACTCCTTCTATCATTTC 59.680 42.308 0.00 0.00 0.00 2.17
4690 7732 6.886459 CCCTTTCAACTCCTTCTATCATTTCA 59.114 38.462 0.00 0.00 0.00 2.69
4712 7771 5.945191 TCAACTCCTATCAATGCAATGACAA 59.055 36.000 6.61 0.00 30.82 3.18
4850 9153 6.753107 AATATAACAAGGAACAAGGAACCG 57.247 37.500 0.00 0.00 0.00 4.44
4851 9154 1.687563 AACAAGGAACAAGGAACCGG 58.312 50.000 0.00 0.00 0.00 5.28
4881 9184 4.020928 ACCGAACAACTGACCATACACATA 60.021 41.667 0.00 0.00 0.00 2.29
4909 9223 6.961554 GGTCTAAACTTTTAGCAATCATGTCG 59.038 38.462 4.15 0.00 39.90 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 0.538516 CGACGAGAGGAGATCCCCAT 60.539 60.000 0.00 0.00 36.42 4.00
45 46 0.390735 ACGCAACCCCTATCAACGAC 60.391 55.000 0.00 0.00 0.00 4.34
48 49 1.670811 CATGACGCAACCCCTATCAAC 59.329 52.381 0.00 0.00 0.00 3.18
50 51 0.908910 ACATGACGCAACCCCTATCA 59.091 50.000 0.00 0.00 0.00 2.15
52 53 0.107214 CCACATGACGCAACCCCTAT 60.107 55.000 0.00 0.00 0.00 2.57
53 54 1.298340 CCACATGACGCAACCCCTA 59.702 57.895 0.00 0.00 0.00 3.53
90 91 1.792949 GACATCACACGACTTCCACAC 59.207 52.381 0.00 0.00 0.00 3.82
99 100 2.804697 TTTCCGAAGACATCACACGA 57.195 45.000 0.00 0.00 0.00 4.35
117 118 9.393249 CATAACACACGAACTATGACAATTTTT 57.607 29.630 0.00 0.00 0.00 1.94
118 119 8.779303 TCATAACACACGAACTATGACAATTTT 58.221 29.630 0.00 0.00 0.00 1.82
119 120 8.317891 TCATAACACACGAACTATGACAATTT 57.682 30.769 0.00 0.00 0.00 1.82
120 121 7.899178 TCATAACACACGAACTATGACAATT 57.101 32.000 0.00 0.00 0.00 2.32
121 122 7.064609 CCTTCATAACACACGAACTATGACAAT 59.935 37.037 0.00 0.00 32.02 2.71
123 124 5.867174 CCTTCATAACACACGAACTATGACA 59.133 40.000 0.00 0.00 32.02 3.58
124 125 5.291128 CCCTTCATAACACACGAACTATGAC 59.709 44.000 0.00 0.00 32.02 3.06
127 128 4.189231 GCCCTTCATAACACACGAACTAT 58.811 43.478 0.00 0.00 0.00 2.12
128 129 3.007074 TGCCCTTCATAACACACGAACTA 59.993 43.478 0.00 0.00 0.00 2.24
129 130 2.224426 TGCCCTTCATAACACACGAACT 60.224 45.455 0.00 0.00 0.00 3.01
130 131 2.147958 TGCCCTTCATAACACACGAAC 58.852 47.619 0.00 0.00 0.00 3.95
131 132 2.422597 CTGCCCTTCATAACACACGAA 58.577 47.619 0.00 0.00 0.00 3.85
133 134 0.447801 GCTGCCCTTCATAACACACG 59.552 55.000 0.00 0.00 0.00 4.49
135 136 0.036164 ACGCTGCCCTTCATAACACA 59.964 50.000 0.00 0.00 0.00 3.72
137 138 0.036164 ACACGCTGCCCTTCATAACA 59.964 50.000 0.00 0.00 0.00 2.41
138 139 0.447801 CACACGCTGCCCTTCATAAC 59.552 55.000 0.00 0.00 0.00 1.89
139 140 0.323302 TCACACGCTGCCCTTCATAA 59.677 50.000 0.00 0.00 0.00 1.90
140 141 0.391130 GTCACACGCTGCCCTTCATA 60.391 55.000 0.00 0.00 0.00 2.15
141 142 1.672356 GTCACACGCTGCCCTTCAT 60.672 57.895 0.00 0.00 0.00 2.57
142 143 2.280797 GTCACACGCTGCCCTTCA 60.281 61.111 0.00 0.00 0.00 3.02
153 154 3.097910 CAAACACACAATGACGTCACAC 58.902 45.455 22.71 0.00 0.00 3.82
154 155 2.477021 GCAAACACACAATGACGTCACA 60.477 45.455 22.71 0.00 0.00 3.58
155 156 2.108700 GCAAACACACAATGACGTCAC 58.891 47.619 22.71 0.00 0.00 3.67
156 157 1.064803 GGCAAACACACAATGACGTCA 59.935 47.619 22.48 22.48 0.00 4.35
157 158 1.753956 GGCAAACACACAATGACGTC 58.246 50.000 9.11 9.11 0.00 4.34
158 159 0.028770 CGGCAAACACACAATGACGT 59.971 50.000 0.00 0.00 40.61 4.34
159 160 2.782171 CGGCAAACACACAATGACG 58.218 52.632 0.00 0.00 39.48 4.35
160 161 1.476074 CACGGCAAACACACAATGAC 58.524 50.000 0.00 0.00 0.00 3.06
161 162 0.248825 GCACGGCAAACACACAATGA 60.249 50.000 0.00 0.00 0.00 2.57
162 163 1.538946 CGCACGGCAAACACACAATG 61.539 55.000 0.00 0.00 0.00 2.82
163 164 1.299014 CGCACGGCAAACACACAAT 60.299 52.632 0.00 0.00 0.00 2.71
164 165 2.101185 CGCACGGCAAACACACAA 59.899 55.556 0.00 0.00 0.00 3.33
165 166 3.128188 ACGCACGGCAAACACACA 61.128 55.556 0.00 0.00 0.00 3.72
167 168 3.882013 CCACGCACGGCAAACACA 61.882 61.111 0.00 0.00 0.00 3.72
168 169 3.404141 AACCACGCACGGCAAACAC 62.404 57.895 0.00 0.00 0.00 3.32
169 170 3.134792 AACCACGCACGGCAAACA 61.135 55.556 0.00 0.00 0.00 2.83
170 171 2.400896 ATCAACCACGCACGGCAAAC 62.401 55.000 0.00 0.00 0.00 2.93
171 172 2.123988 GATCAACCACGCACGGCAAA 62.124 55.000 0.00 0.00 0.00 3.68
173 174 3.047280 GATCAACCACGCACGGCA 61.047 61.111 0.00 0.00 0.00 5.69
174 175 3.047280 TGATCAACCACGCACGGC 61.047 61.111 0.00 0.00 0.00 5.68
175 176 2.860293 GTGATCAACCACGCACGG 59.140 61.111 0.00 0.00 0.00 4.94
182 183 5.063204 AGAAAGAAATGTCGTGATCAACCA 58.937 37.500 0.00 0.00 0.00 3.67
183 184 5.409826 AGAGAAAGAAATGTCGTGATCAACC 59.590 40.000 0.00 0.00 0.00 3.77
184 185 6.473397 AGAGAAAGAAATGTCGTGATCAAC 57.527 37.500 0.00 0.00 0.00 3.18
185 186 8.777865 ATAAGAGAAAGAAATGTCGTGATCAA 57.222 30.769 0.00 0.00 0.00 2.57
186 187 8.253810 AGATAAGAGAAAGAAATGTCGTGATCA 58.746 33.333 0.00 0.00 0.00 2.92
188 189 9.092876 GAAGATAAGAGAAAGAAATGTCGTGAT 57.907 33.333 0.00 0.00 0.00 3.06
189 190 8.307483 AGAAGATAAGAGAAAGAAATGTCGTGA 58.693 33.333 0.00 0.00 0.00 4.35
190 191 8.472683 AGAAGATAAGAGAAAGAAATGTCGTG 57.527 34.615 0.00 0.00 0.00 4.35
191 192 9.495572 AAAGAAGATAAGAGAAAGAAATGTCGT 57.504 29.630 0.00 0.00 0.00 4.34
192 193 9.965748 GAAAGAAGATAAGAGAAAGAAATGTCG 57.034 33.333 0.00 0.00 0.00 4.35
215 795 6.147821 GTGCACACAGCTAAAGAGATAAGAAA 59.852 38.462 13.17 0.00 45.94 2.52
218 798 4.331168 GGTGCACACAGCTAAAGAGATAAG 59.669 45.833 20.43 0.00 45.94 1.73
231 811 4.275689 TCAAGACATTTTAGGTGCACACAG 59.724 41.667 20.43 3.27 0.00 3.66
271 851 9.189156 AGGTGAGCATTTGTAATTGTATTGTAT 57.811 29.630 0.00 0.00 0.00 2.29
272 852 8.574251 AGGTGAGCATTTGTAATTGTATTGTA 57.426 30.769 0.00 0.00 0.00 2.41
279 859 5.323900 CGTGTAGGTGAGCATTTGTAATTG 58.676 41.667 0.00 0.00 0.00 2.32
287 867 2.093711 TGTATGCGTGTAGGTGAGCATT 60.094 45.455 7.09 0.00 46.75 3.56
300 880 0.806102 GTGGCGATGAGTGTATGCGT 60.806 55.000 0.00 0.00 0.00 5.24
302 882 0.179073 AGGTGGCGATGAGTGTATGC 60.179 55.000 0.00 0.00 0.00 3.14
316 896 5.065731 GTCTCAAAAATGCTCATAGAGGTGG 59.934 44.000 0.00 0.00 0.00 4.61
332 912 2.798283 GTGTCGGTTCGATGTCTCAAAA 59.202 45.455 0.00 0.00 38.42 2.44
334 914 1.338655 TGTGTCGGTTCGATGTCTCAA 59.661 47.619 0.00 0.00 38.42 3.02
346 926 6.038825 TGTTAATTTCAAGATGTTGTGTCGGT 59.961 34.615 2.11 0.00 34.98 4.69
350 930 9.301153 GACTTTGTTAATTTCAAGATGTTGTGT 57.699 29.630 2.11 0.00 34.98 3.72
364 944 3.574614 GCATGCGGTGACTTTGTTAATT 58.425 40.909 0.00 0.00 0.00 1.40
368 948 1.282570 CGCATGCGGTGACTTTGTT 59.717 52.632 31.99 0.00 35.56 2.83
380 960 0.652592 ATCGACTACAAAGCGCATGC 59.347 50.000 11.47 7.91 43.24 4.06
381 961 1.926510 TCATCGACTACAAAGCGCATG 59.073 47.619 11.47 11.29 0.00 4.06
388 968 7.905604 ATGAAATGTTCTCATCGACTACAAA 57.094 32.000 0.00 0.00 32.56 2.83
416 996 2.550978 ACCCGATGATGTTCGTTCATC 58.449 47.619 12.85 12.85 43.89 2.92
430 1010 8.707796 TCTAGATTTATTTCAGACTACCCGAT 57.292 34.615 0.00 0.00 0.00 4.18
431 1011 8.529424 TTCTAGATTTATTTCAGACTACCCGA 57.471 34.615 0.00 0.00 0.00 5.14
452 1032 3.138304 ACACTTGTGCTCGCATTTTCTA 58.862 40.909 0.10 0.00 0.00 2.10
480 1061 7.269514 CCACCATGGTTCAAGTCCTAGACTT 62.270 48.000 16.84 4.16 41.98 3.01
515 1096 7.362662 GCTCAGATGATTAGTTGTTTTTGTGA 58.637 34.615 0.00 0.00 0.00 3.58
543 1124 4.913924 GCTAAGACATTTGCAAACTGAGTG 59.086 41.667 15.41 11.02 37.16 3.51
552 1133 7.551035 AAACAAAAATGCTAAGACATTTGCA 57.449 28.000 3.47 0.00 46.80 4.08
570 1151 3.256879 TCAACCACTCACAGCAAAACAAA 59.743 39.130 0.00 0.00 0.00 2.83
581 1162 1.060713 CGACACGATCAACCACTCAC 58.939 55.000 0.00 0.00 0.00 3.51
582 1163 0.671796 ACGACACGATCAACCACTCA 59.328 50.000 0.00 0.00 0.00 3.41
584 1165 2.234300 AAACGACACGATCAACCACT 57.766 45.000 0.00 0.00 0.00 4.00
622 1205 2.611518 CACACGGCCAAAAAGACAAAA 58.388 42.857 2.24 0.00 0.00 2.44
632 1215 0.752009 TTTTAGGTGCACACGGCCAA 60.752 50.000 20.43 0.15 43.89 4.52
635 1218 0.596082 ACATTTTAGGTGCACACGGC 59.404 50.000 20.43 0.19 45.13 5.68
641 1224 3.826524 TGGTCAAGACATTTTAGGTGCA 58.173 40.909 2.29 0.00 0.00 4.57
642 1225 4.846779 TTGGTCAAGACATTTTAGGTGC 57.153 40.909 2.29 0.00 0.00 5.01
655 1238 7.385752 ACAATGCAATGTTAAGATTTGGTCAAG 59.614 33.333 0.28 0.00 0.00 3.02
779 1429 6.365050 ACGTTGTATTTCACGGTTTTCATAC 58.635 36.000 0.00 0.00 0.00 2.39
820 1470 9.751542 AATCACAAAATGAACCGTAAAAATGTA 57.248 25.926 0.00 0.00 41.93 2.29
821 1471 8.655651 AATCACAAAATGAACCGTAAAAATGT 57.344 26.923 0.00 0.00 41.93 2.71
822 1472 9.928236 AAAATCACAAAATGAACCGTAAAAATG 57.072 25.926 0.00 0.00 41.93 2.32
825 1475 9.804758 ACTAAAATCACAAAATGAACCGTAAAA 57.195 25.926 0.00 0.00 41.93 1.52
826 1476 9.239002 CACTAAAATCACAAAATGAACCGTAAA 57.761 29.630 0.00 0.00 41.93 2.01
827 1477 7.863375 CCACTAAAATCACAAAATGAACCGTAA 59.137 33.333 0.00 0.00 41.93 3.18
939 1593 0.604780 GGTCTGTGCAGTGTGCTGAT 60.605 55.000 0.00 0.00 45.31 2.90
955 1609 2.413765 GACGATCGAGCTGGGGTC 59.586 66.667 24.34 1.79 0.00 4.46
1089 1743 4.791069 GTAGTGGGGGAGCCGGGA 62.791 72.222 2.18 0.00 0.00 5.14
1100 1754 1.033746 TCTCGGTAAGGGCGTAGTGG 61.034 60.000 0.00 0.00 0.00 4.00
1122 1776 2.997897 GACAGGAGGAGGTGGCGT 60.998 66.667 0.00 0.00 0.00 5.68
1433 2093 2.954318 CCTTATCAGAAATGCAGGGTGG 59.046 50.000 0.00 0.00 0.00 4.61
1435 2095 3.303351 CCCTTATCAGAAATGCAGGGT 57.697 47.619 0.00 0.00 36.88 4.34
1452 2112 0.747255 CAGCACGCAGTAGATACCCT 59.253 55.000 0.00 0.00 41.61 4.34
1453 2113 0.876342 GCAGCACGCAGTAGATACCC 60.876 60.000 0.00 0.00 41.61 3.69
1515 2175 5.072872 CAGTCCCCAGATATGAAAGATTCCT 59.927 44.000 0.00 0.00 0.00 3.36
1516 2176 5.312079 CAGTCCCCAGATATGAAAGATTCC 58.688 45.833 0.00 0.00 0.00 3.01
1518 2178 4.105377 CCCAGTCCCCAGATATGAAAGATT 59.895 45.833 0.00 0.00 0.00 2.40
1519 2179 3.654806 CCCAGTCCCCAGATATGAAAGAT 59.345 47.826 0.00 0.00 0.00 2.40
1523 2191 1.010793 ACCCCAGTCCCCAGATATGAA 59.989 52.381 0.00 0.00 0.00 2.57
1533 2201 0.253327 GAAGACATCACCCCAGTCCC 59.747 60.000 0.00 0.00 32.82 4.46
1535 2203 1.134965 CGAGAAGACATCACCCCAGTC 60.135 57.143 0.00 0.00 0.00 3.51
1536 2204 0.898320 CGAGAAGACATCACCCCAGT 59.102 55.000 0.00 0.00 0.00 4.00
1571 2244 9.630098 CAATTCTGTTGTGCTATTGAAATAACT 57.370 29.630 0.00 0.00 0.00 2.24
1584 2257 1.535462 AGGTACGCAATTCTGTTGTGC 59.465 47.619 1.61 0.00 33.53 4.57
1590 2263 1.532505 GCATGCAGGTACGCAATTCTG 60.533 52.381 14.21 0.00 46.87 3.02
1598 2500 1.845266 CTGACTAGCATGCAGGTACG 58.155 55.000 21.98 8.27 0.00 3.67
1754 2660 7.744087 AGCATATACTCAACTTGTTCACAAA 57.256 32.000 0.00 0.00 35.15 2.83
1788 2694 4.261952 CCATGAAAGGTATGCACAAACACA 60.262 41.667 0.00 0.00 0.00 3.72
1792 2698 4.771577 ACATCCATGAAAGGTATGCACAAA 59.228 37.500 0.00 0.00 0.00 2.83
1832 2739 2.104792 GAGTTGGCATGCTATACCAGGA 59.895 50.000 18.92 0.00 34.28 3.86
1851 2758 6.070824 AGCCTTAGAGAAGAAAAAGAGGAGAG 60.071 42.308 0.00 0.00 34.25 3.20
1963 2875 5.352293 GTGCATTGACACTCATTCTATGTGA 59.648 40.000 0.00 0.00 37.58 3.58
1990 2902 6.202762 TGCACATTTTCTAACTGACACTACTG 59.797 38.462 0.00 0.00 0.00 2.74
1999 2911 9.409312 TGAAATTGTATGCACATTTTCTAACTG 57.591 29.630 18.02 0.00 46.04 3.16
2001 2913 9.624697 TCTGAAATTGTATGCACATTTTCTAAC 57.375 29.630 18.02 2.54 46.04 2.34
2032 2944 6.386654 CAAGGGCACGAATTTACTTGTATTT 58.613 36.000 0.00 0.00 32.79 1.40
2049 2961 0.039035 AAAATCGGGTAGCAAGGGCA 59.961 50.000 0.00 0.00 44.61 5.36
2050 2962 2.047002 TAAAATCGGGTAGCAAGGGC 57.953 50.000 0.00 0.00 41.61 5.19
2051 2963 4.401202 ACATTTAAAATCGGGTAGCAAGGG 59.599 41.667 0.00 0.00 0.00 3.95
2055 2967 4.093703 CGTCACATTTAAAATCGGGTAGCA 59.906 41.667 0.00 0.00 0.00 3.49
2077 2989 2.020720 AGGAGTGATCAGCAGTACTCG 58.979 52.381 0.00 0.00 36.28 4.18
2135 3047 5.590530 TGCTTGCTGGTAGAAAAGAAAAA 57.409 34.783 0.00 0.00 0.00 1.94
2174 3087 1.009829 CCAACATAGTCTGCGCTTCC 58.990 55.000 9.73 0.00 0.00 3.46
2198 3111 5.907197 AGCGTATGATATTGAAAAGGTCG 57.093 39.130 0.00 0.00 0.00 4.79
2294 3207 1.208165 CCCAAACCCCCAGCTCTACT 61.208 60.000 0.00 0.00 0.00 2.57
2384 3297 2.254152 AGGATCTTACTGTGAGGGCA 57.746 50.000 0.00 0.00 0.00 5.36
2484 3397 4.646492 CCAAGAATACCATCCAAGAAAGGG 59.354 45.833 0.00 0.00 0.00 3.95
2552 3465 2.576191 TCCAGAATACCAACCCCAAGAG 59.424 50.000 0.00 0.00 0.00 2.85
2556 3469 2.053747 ACTCCAGAATACCAACCCCA 57.946 50.000 0.00 0.00 0.00 4.96
2605 3518 7.556844 ACTTGTGGACCTTTACATGTAGATAG 58.443 38.462 5.56 5.39 34.62 2.08
2647 3560 2.552315 GTTCTCCTGCATGGTTCGAAAA 59.448 45.455 0.00 0.00 37.07 2.29
2649 3562 1.347707 AGTTCTCCTGCATGGTTCGAA 59.652 47.619 0.00 0.00 37.07 3.71
2650 3563 0.976641 AGTTCTCCTGCATGGTTCGA 59.023 50.000 0.00 0.00 37.07 3.71
2651 3564 1.081892 CAGTTCTCCTGCATGGTTCG 58.918 55.000 0.00 0.00 33.59 3.95
2681 3594 8.414778 CGTTTGTACTCCCTCTCTATCTTTAAT 58.585 37.037 0.00 0.00 0.00 1.40
2682 3595 7.613022 TCGTTTGTACTCCCTCTCTATCTTTAA 59.387 37.037 0.00 0.00 0.00 1.52
2683 3596 7.066766 GTCGTTTGTACTCCCTCTCTATCTTTA 59.933 40.741 0.00 0.00 0.00 1.85
2684 3597 5.950549 TCGTTTGTACTCCCTCTCTATCTTT 59.049 40.000 0.00 0.00 0.00 2.52
2685 3598 5.357596 GTCGTTTGTACTCCCTCTCTATCTT 59.642 44.000 0.00 0.00 0.00 2.40
2686 3599 4.883006 GTCGTTTGTACTCCCTCTCTATCT 59.117 45.833 0.00 0.00 0.00 1.98
2687 3600 4.036616 GGTCGTTTGTACTCCCTCTCTATC 59.963 50.000 0.00 0.00 0.00 2.08
2688 3601 3.952967 GGTCGTTTGTACTCCCTCTCTAT 59.047 47.826 0.00 0.00 0.00 1.98
2689 3602 3.245016 TGGTCGTTTGTACTCCCTCTCTA 60.245 47.826 0.00 0.00 0.00 2.43
2690 3603 2.169330 GGTCGTTTGTACTCCCTCTCT 58.831 52.381 0.00 0.00 0.00 3.10
2691 3604 1.891150 TGGTCGTTTGTACTCCCTCTC 59.109 52.381 0.00 0.00 0.00 3.20
2692 3605 2.005370 TGGTCGTTTGTACTCCCTCT 57.995 50.000 0.00 0.00 0.00 3.69
2693 3606 2.825861 TTGGTCGTTTGTACTCCCTC 57.174 50.000 0.00 0.00 0.00 4.30
2694 3607 3.118149 AGTTTTGGTCGTTTGTACTCCCT 60.118 43.478 0.00 0.00 0.00 4.20
2695 3608 3.208594 AGTTTTGGTCGTTTGTACTCCC 58.791 45.455 0.00 0.00 0.00 4.30
2696 3609 4.888038 AAGTTTTGGTCGTTTGTACTCC 57.112 40.909 0.00 0.00 0.00 3.85
2697 3610 5.963586 CAGAAAGTTTTGGTCGTTTGTACTC 59.036 40.000 0.00 0.00 0.00 2.59
2698 3611 5.644636 TCAGAAAGTTTTGGTCGTTTGTACT 59.355 36.000 0.00 0.00 0.00 2.73
2699 3612 5.871539 TCAGAAAGTTTTGGTCGTTTGTAC 58.128 37.500 0.00 0.00 0.00 2.90
2700 3613 6.316319 GTTCAGAAAGTTTTGGTCGTTTGTA 58.684 36.000 0.00 0.00 0.00 2.41
2701 3614 5.158494 GTTCAGAAAGTTTTGGTCGTTTGT 58.842 37.500 0.00 0.00 0.00 2.83
2702 3615 4.262045 CGTTCAGAAAGTTTTGGTCGTTTG 59.738 41.667 0.00 0.00 0.00 2.93
2703 3616 4.083164 ACGTTCAGAAAGTTTTGGTCGTTT 60.083 37.500 0.00 0.00 0.00 3.60
2704 3617 3.437741 ACGTTCAGAAAGTTTTGGTCGTT 59.562 39.130 0.00 0.00 0.00 3.85
2705 3618 3.004862 ACGTTCAGAAAGTTTTGGTCGT 58.995 40.909 0.00 3.43 0.00 4.34
2706 3619 3.668596 ACGTTCAGAAAGTTTTGGTCG 57.331 42.857 0.00 2.92 0.00 4.79
2707 3620 6.699895 AAAAACGTTCAGAAAGTTTTGGTC 57.300 33.333 29.23 0.00 44.29 4.02
2708 3621 8.652463 CAATAAAAACGTTCAGAAAGTTTTGGT 58.348 29.630 29.23 20.90 44.29 3.67
2709 3622 8.652463 ACAATAAAAACGTTCAGAAAGTTTTGG 58.348 29.630 29.23 22.49 44.29 3.28
2710 3623 9.670180 GACAATAAAAACGTTCAGAAAGTTTTG 57.330 29.630 29.23 22.50 44.29 2.44
2711 3624 9.634163 AGACAATAAAAACGTTCAGAAAGTTTT 57.366 25.926 25.47 25.47 46.18 2.43
2712 3625 9.634163 AAGACAATAAAAACGTTCAGAAAGTTT 57.366 25.926 18.29 18.29 39.45 2.66
2716 3629 9.672086 CCATAAGACAATAAAAACGTTCAGAAA 57.328 29.630 0.00 0.00 0.00 2.52
2717 3630 7.806014 GCCATAAGACAATAAAAACGTTCAGAA 59.194 33.333 0.00 0.00 0.00 3.02
2718 3631 7.174253 AGCCATAAGACAATAAAAACGTTCAGA 59.826 33.333 0.00 0.00 0.00 3.27
2719 3632 7.305474 AGCCATAAGACAATAAAAACGTTCAG 58.695 34.615 0.00 0.00 0.00 3.02
2720 3633 7.209471 AGCCATAAGACAATAAAAACGTTCA 57.791 32.000 0.00 0.00 0.00 3.18
2721 3634 9.783256 ATAAGCCATAAGACAATAAAAACGTTC 57.217 29.630 0.00 0.00 0.00 3.95
2731 3644 9.765795 GAACAGTACTATAAGCCATAAGACAAT 57.234 33.333 0.00 0.00 0.00 2.71
2740 3653 5.479027 TGACACAGAACAGTACTATAAGCCA 59.521 40.000 0.00 0.00 0.00 4.75
2752 3665 5.333645 GCACACTAATCTTGACACAGAACAG 60.334 44.000 0.00 0.00 0.00 3.16
2781 3694 6.595716 AGCACACTAATACAGAGGTCAAATTC 59.404 38.462 0.00 0.00 0.00 2.17
2789 3702 8.723942 AATTCTAAAGCACACTAATACAGAGG 57.276 34.615 0.00 0.00 0.00 3.69
2835 3748 6.490040 AGTTGTGCAGTTATTATCAACTTGGT 59.510 34.615 8.73 0.00 41.31 3.67
2836 3749 6.913170 AGTTGTGCAGTTATTATCAACTTGG 58.087 36.000 8.73 0.00 41.31 3.61
2874 3788 3.519579 ACGCAGAGACAAGATCAATCAG 58.480 45.455 0.00 0.00 0.00 2.90
2899 3813 6.410540 GTCAGAAGATCACCAACCTAAAGAT 58.589 40.000 0.00 0.00 0.00 2.40
2928 3842 6.536941 TGAATTCCAAAACAAAAGGCACTAAC 59.463 34.615 2.27 0.00 38.49 2.34
3006 3920 0.251341 ACCTGACATCCAACAAGGGC 60.251 55.000 0.00 0.00 38.24 5.19
3008 3922 4.021102 ACTAACCTGACATCCAACAAGG 57.979 45.455 0.00 0.00 39.47 3.61
3034 3948 6.432162 TGCAAGAGAAGCATTGAGATTTAGTT 59.568 34.615 0.00 0.00 37.02 2.24
3068 3982 7.826260 TGAGAACAAAGTGGAAAATTTTCAC 57.174 32.000 27.53 22.26 38.92 3.18
3081 3996 8.506168 TTAGAACACTTCATTGAGAACAAAGT 57.494 30.769 0.00 0.00 39.54 2.66
3082 3997 9.787532 TTTTAGAACACTTCATTGAGAACAAAG 57.212 29.630 0.00 0.00 39.54 2.77
3092 4007 9.883142 TCAAACCAATTTTTAGAACACTTCATT 57.117 25.926 0.00 0.00 0.00 2.57
3117 4032 2.415512 GCTACGACAACCACCTGATTTC 59.584 50.000 0.00 0.00 0.00 2.17
3157 4072 9.425248 TTCTGGAGGAAGCATTTAATAATGAAT 57.575 29.630 2.25 0.00 43.12 2.57
3164 4079 5.361857 CCACATTCTGGAGGAAGCATTTAAT 59.638 40.000 0.00 0.00 43.95 1.40
3228 4143 4.697514 AGGAAACGATGACATCATACTGG 58.302 43.478 15.58 0.69 36.57 4.00
3295 4210 5.615925 AGTTACTAACCTCTGCCCATAAG 57.384 43.478 0.00 0.00 0.00 1.73
3702 4704 9.479549 ACCCACATATTCTGAGATTATTTGTTT 57.520 29.630 8.72 0.00 0.00 2.83
3715 4717 7.915397 GTGCTTTAACATAACCCACATATTCTG 59.085 37.037 0.00 0.00 0.00 3.02
3798 4870 8.752254 GTTAACTTTATTGTCCAAGTTTGAAGC 58.248 33.333 0.00 0.00 39.69 3.86
3872 4991 5.043248 CGGCTGAAAAGAAAAACATGAGTT 58.957 37.500 0.00 0.00 40.40 3.01
3877 4996 4.558697 GCTACCGGCTGAAAAGAAAAACAT 60.559 41.667 0.00 0.00 38.06 2.71
4109 5284 0.905357 TCAGCCTAGTGAGCTTTCCC 59.095 55.000 0.00 0.00 38.95 3.97
4134 5312 1.613630 ACCAGTGAGCCACCCCTAG 60.614 63.158 0.00 0.00 34.49 3.02
4345 5541 4.525912 AACAAAGGTTGATGCAGAATCC 57.474 40.909 0.00 0.00 35.46 3.01
4480 5794 1.040646 GGAGTATGCCGTCTGATCCA 58.959 55.000 0.00 0.00 0.00 3.41
4628 7670 4.569966 CACAGATGTACCTCTGAGCATTTC 59.430 45.833 28.31 0.00 44.48 2.17
4631 7673 2.433604 CCACAGATGTACCTCTGAGCAT 59.566 50.000 28.31 8.72 44.48 3.79
4679 7721 8.212995 TGCATTGATAGGAGTTGAAATGATAGA 58.787 33.333 0.00 0.00 0.00 1.98
4680 7722 8.387190 TGCATTGATAGGAGTTGAAATGATAG 57.613 34.615 0.00 0.00 0.00 2.08
4681 7723 8.750515 TTGCATTGATAGGAGTTGAAATGATA 57.249 30.769 0.00 0.00 0.00 2.15
4682 7724 7.649533 TTGCATTGATAGGAGTTGAAATGAT 57.350 32.000 0.00 0.00 0.00 2.45
4683 7725 7.339976 TCATTGCATTGATAGGAGTTGAAATGA 59.660 33.333 7.19 1.42 39.10 2.57
4684 7726 7.434307 GTCATTGCATTGATAGGAGTTGAAATG 59.566 37.037 13.96 0.00 35.52 2.32
4685 7727 7.123098 TGTCATTGCATTGATAGGAGTTGAAAT 59.877 33.333 13.96 0.00 0.00 2.17
4686 7728 6.433716 TGTCATTGCATTGATAGGAGTTGAAA 59.566 34.615 13.96 0.00 0.00 2.69
4687 7729 5.945191 TGTCATTGCATTGATAGGAGTTGAA 59.055 36.000 13.96 0.00 0.00 2.69
4688 7730 5.499313 TGTCATTGCATTGATAGGAGTTGA 58.501 37.500 13.96 0.00 0.00 3.18
4689 7731 5.823209 TGTCATTGCATTGATAGGAGTTG 57.177 39.130 13.96 0.00 0.00 3.16
4690 7732 5.163581 GCTTGTCATTGCATTGATAGGAGTT 60.164 40.000 17.59 0.00 0.00 3.01
4824 9089 7.320399 GGTTCCTTGTTCCTTGTTATATTTGG 58.680 38.462 0.00 0.00 0.00 3.28
4850 9153 0.249280 CAGTTGTTCGGTTTTGGCCC 60.249 55.000 0.00 0.00 0.00 5.80
4851 9154 0.741915 TCAGTTGTTCGGTTTTGGCC 59.258 50.000 0.00 0.00 0.00 5.36
4881 9184 6.870971 TGATTGCTAAAAGTTTAGACCGTT 57.129 33.333 13.75 0.00 42.05 4.44
4909 9223 0.813821 GAATTCAGGTCAGGCAAGCC 59.186 55.000 2.02 2.02 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.