Multiple sequence alignment - TraesCS7D01G210400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G210400 chr7D 100.000 5808 0 0 1 5808 168423163 168428970 0.000000e+00 10726.0
1 TraesCS7D01G210400 chr7D 91.682 553 42 3 5260 5808 539758451 539759003 0.000000e+00 763.0
2 TraesCS7D01G210400 chr7D 90.112 536 46 6 5256 5786 572273816 572273283 0.000000e+00 689.0
3 TraesCS7D01G210400 chr7D 95.745 141 4 1 5121 5261 168441206 168441344 5.860000e-55 226.0
4 TraesCS7D01G210400 chr7D 98.438 128 2 0 81 208 403812163 403812036 5.860000e-55 226.0
5 TraesCS7D01G210400 chr7D 91.892 74 6 0 1 74 569606088 569606161 2.860000e-18 104.0
6 TraesCS7D01G210400 chr7A 91.376 4105 213 64 210 4232 170629404 170633449 0.000000e+00 5489.0
7 TraesCS7D01G210400 chr7A 96.647 686 23 0 4326 5011 170633448 170634133 0.000000e+00 1140.0
8 TraesCS7D01G210400 chr7A 89.748 556 57 0 5253 5808 574677817 574677262 0.000000e+00 712.0
9 TraesCS7D01G210400 chr7B 91.475 2604 126 35 341 2886 133742238 133744803 0.000000e+00 3491.0
10 TraesCS7D01G210400 chr7B 96.742 1320 31 6 2915 4232 133744803 133746112 0.000000e+00 2189.0
11 TraesCS7D01G210400 chr7B 90.026 782 48 15 4326 5093 133746111 133746876 0.000000e+00 985.0
12 TraesCS7D01G210400 chr7B 89.154 544 55 4 5255 5796 611964182 611964723 0.000000e+00 675.0
13 TraesCS7D01G210400 chr4D 91.075 549 49 0 5260 5808 29639804 29640352 0.000000e+00 743.0
14 TraesCS7D01G210400 chr4D 95.370 108 3 2 4231 4337 375382012 375381906 2.780000e-38 171.0
15 TraesCS7D01G210400 chr5D 89.228 557 44 10 5258 5802 93060596 93060044 0.000000e+00 682.0
16 TraesCS7D01G210400 chr2D 88.393 560 51 11 5257 5807 430012299 430012853 0.000000e+00 662.0
17 TraesCS7D01G210400 chr2D 96.850 127 4 0 81 207 376857622 376857748 4.560000e-51 213.0
18 TraesCS7D01G210400 chr2D 95.283 106 3 2 4223 4327 442441945 442441841 3.600000e-37 167.0
19 TraesCS7D01G210400 chr2D 90.698 86 4 3 5178 5261 331762737 331762654 1.710000e-20 111.0
20 TraesCS7D01G210400 chr3B 88.246 553 60 3 5260 5808 708603292 708602741 0.000000e+00 656.0
21 TraesCS7D01G210400 chr3B 94.074 135 7 1 74 207 263988017 263988151 2.740000e-48 204.0
22 TraesCS7D01G210400 chr3B 93.478 138 8 1 77 214 815153969 815153833 2.740000e-48 204.0
23 TraesCS7D01G210400 chr3A 88.160 549 64 1 5260 5808 682034809 682035356 0.000000e+00 652.0
24 TraesCS7D01G210400 chr3A 96.899 129 4 0 80 208 365363076 365363204 3.520000e-52 217.0
25 TraesCS7D01G210400 chr3A 96.212 132 5 0 79 210 474435806 474435675 3.520000e-52 217.0
26 TraesCS7D01G210400 chr3A 98.000 100 2 0 4231 4330 287684782 287684683 2.150000e-39 174.0
27 TraesCS7D01G210400 chr3A 96.154 104 4 0 4231 4334 620767225 620767122 2.780000e-38 171.0
28 TraesCS7D01G210400 chr5B 96.154 130 5 0 78 207 450458552 450458423 4.560000e-51 213.0
29 TraesCS7D01G210400 chr5B 98.095 105 1 1 4230 4333 625959461 625959565 1.290000e-41 182.0
30 TraesCS7D01G210400 chr5B 96.154 104 4 0 4231 4334 428958902 428959005 2.780000e-38 171.0
31 TraesCS7D01G210400 chr5B 93.694 111 6 1 4231 4341 638485474 638485365 1.290000e-36 165.0
32 TraesCS7D01G210400 chr6D 96.094 128 5 0 80 207 2065522 2065649 5.900000e-50 209.0
33 TraesCS7D01G210400 chr6D 96.094 128 5 0 80 207 62116262 62116135 5.900000e-50 209.0
34 TraesCS7D01G210400 chr4B 90.604 149 11 2 5113 5261 58764274 58764129 1.650000e-45 195.0
35 TraesCS7D01G210400 chr4B 90.909 143 11 1 5119 5261 58761632 58761492 2.140000e-44 191.0
36 TraesCS7D01G210400 chr4B 88.095 84 6 3 5178 5259 242711609 242711690 4.790000e-16 97.1
37 TraesCS7D01G210400 chr6B 89.933 149 11 3 5113 5261 53654095 53654239 7.680000e-44 189.0
38 TraesCS7D01G210400 chr6B 89.510 143 13 1 5119 5261 53642118 53642258 4.620000e-41 180.0
39 TraesCS7D01G210400 chr6B 89.873 79 8 0 1 79 27127270 27127192 1.030000e-17 102.0
40 TraesCS7D01G210400 chr1D 90.000 150 10 4 5112 5261 409490585 409490729 7.680000e-44 189.0
41 TraesCS7D01G210400 chr1D 88.667 150 12 4 5112 5261 409495138 409495282 1.660000e-40 178.0
42 TraesCS7D01G210400 chr1D 98.000 100 2 0 4228 4327 275529198 275529297 2.150000e-39 174.0
43 TraesCS7D01G210400 chr1D 93.151 73 5 0 1 73 47945227 47945299 2.210000e-19 108.0
44 TraesCS7D01G210400 chr1D 90.909 77 7 0 1 77 493224197 493224121 2.860000e-18 104.0
45 TraesCS7D01G210400 chr1A 96.117 103 4 0 4226 4328 6567191 6567089 1.000000e-37 169.0
46 TraesCS7D01G210400 chrUn 91.892 74 6 0 1 74 326633755 326633828 2.860000e-18 104.0
47 TraesCS7D01G210400 chrUn 91.892 74 6 0 1 74 382902913 382902986 2.860000e-18 104.0
48 TraesCS7D01G210400 chr4A 91.892 74 6 0 1 74 712645509 712645436 2.860000e-18 104.0
49 TraesCS7D01G210400 chr4A 91.892 74 6 0 1 74 712808913 712808840 2.860000e-18 104.0
50 TraesCS7D01G210400 chr1B 83.838 99 14 2 1 97 322097859 322097957 6.200000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G210400 chr7D 168423163 168428970 5807 False 10726.000000 10726 100.000000 1 5808 1 chr7D.!!$F1 5807
1 TraesCS7D01G210400 chr7D 539758451 539759003 552 False 763.000000 763 91.682000 5260 5808 1 chr7D.!!$F3 548
2 TraesCS7D01G210400 chr7D 572273283 572273816 533 True 689.000000 689 90.112000 5256 5786 1 chr7D.!!$R2 530
3 TraesCS7D01G210400 chr7A 170629404 170634133 4729 False 3314.500000 5489 94.011500 210 5011 2 chr7A.!!$F1 4801
4 TraesCS7D01G210400 chr7A 574677262 574677817 555 True 712.000000 712 89.748000 5253 5808 1 chr7A.!!$R1 555
5 TraesCS7D01G210400 chr7B 133742238 133746876 4638 False 2221.666667 3491 92.747667 341 5093 3 chr7B.!!$F2 4752
6 TraesCS7D01G210400 chr7B 611964182 611964723 541 False 675.000000 675 89.154000 5255 5796 1 chr7B.!!$F1 541
7 TraesCS7D01G210400 chr4D 29639804 29640352 548 False 743.000000 743 91.075000 5260 5808 1 chr4D.!!$F1 548
8 TraesCS7D01G210400 chr5D 93060044 93060596 552 True 682.000000 682 89.228000 5258 5802 1 chr5D.!!$R1 544
9 TraesCS7D01G210400 chr2D 430012299 430012853 554 False 662.000000 662 88.393000 5257 5807 1 chr2D.!!$F2 550
10 TraesCS7D01G210400 chr3B 708602741 708603292 551 True 656.000000 656 88.246000 5260 5808 1 chr3B.!!$R1 548
11 TraesCS7D01G210400 chr3A 682034809 682035356 547 False 652.000000 652 88.160000 5260 5808 1 chr3A.!!$F2 548

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
34 35 0.034059 CCGTGATGGGCTGAGGATAC 59.966 60.0 0.00 0.0 0.00 2.24 F
35 36 0.034059 CGTGATGGGCTGAGGATACC 59.966 60.0 0.00 0.0 37.17 2.73 F
76 77 0.034896 CCACAGGTTGGTTCGCTAGT 59.965 55.0 0.00 0.0 41.10 2.57 F
306 310 0.038166 TTGAAAGTGCCCAGCCCTAG 59.962 55.0 0.00 0.0 0.00 3.02 F
344 348 0.038892 TCGCTGGTACGAGGTGTTTC 60.039 55.0 7.03 0.0 37.09 2.78 F
1764 1789 0.248907 CTCGGATCGTATGTGCGGTT 60.249 55.0 0.00 0.0 0.00 4.44 F
1770 1795 0.315886 TCGTATGTGCGGTTCAGTGT 59.684 50.0 0.00 0.0 0.00 3.55 F
2963 3039 0.537188 ATGTTAGTGTCTCCCTGGCG 59.463 55.0 0.00 0.0 0.00 5.69 F
4570 4664 0.108804 GTCGGCCGAGATCAACTGAA 60.109 55.0 31.97 0.0 0.00 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1180 1196 0.032217 CTCCTCCTCCTCCTGCTCTT 60.032 60.000 0.00 0.0 0.00 2.85 R
1378 1397 0.182061 TGGTAGTCCCTATCGTCGCT 59.818 55.000 0.00 0.0 0.00 4.93 R
1425 1444 1.787155 CGAACAAGAGTCGACTTGGTG 59.213 52.381 21.08 18.9 46.02 4.17 R
2242 2282 0.413037 ATGTTTTGGGGCATCAGGGA 59.587 50.000 0.00 0.0 0.00 4.20 R
2373 2413 7.284074 ACTCGAGTAGATTTATCAAGAGAGGA 58.716 38.462 18.46 0.0 0.00 3.71 R
3081 3157 0.108615 GCAGACTGATGCGTGGTACT 60.109 55.000 6.65 0.0 36.28 2.73 R
3771 3863 1.734655 AGCTCTCTCCCAGGACAAAA 58.265 50.000 0.00 0.0 0.00 2.44 R
4606 4700 0.239347 GCTGGACACATTGTCTGCAC 59.761 55.000 14.98 0.0 46.19 4.57 R
5491 5601 1.080637 GTGCGCATTGATGTTGGCA 60.081 52.632 15.91 0.0 0.00 4.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.681152 GCACCAGAACTTAAACCGTG 57.319 50.000 0.00 0.00 0.00 4.94
20 21 2.215196 GCACCAGAACTTAAACCGTGA 58.785 47.619 0.00 0.00 0.00 4.35
21 22 2.812011 GCACCAGAACTTAAACCGTGAT 59.188 45.455 0.00 0.00 0.00 3.06
22 23 3.364964 GCACCAGAACTTAAACCGTGATG 60.365 47.826 0.00 0.00 0.00 3.07
23 24 3.188460 CACCAGAACTTAAACCGTGATGG 59.812 47.826 0.00 0.00 46.41 3.51
24 25 2.747446 CCAGAACTTAAACCGTGATGGG 59.253 50.000 0.00 0.00 44.64 4.00
25 26 2.161609 CAGAACTTAAACCGTGATGGGC 59.838 50.000 0.00 0.00 44.64 5.36
26 27 2.039879 AGAACTTAAACCGTGATGGGCT 59.960 45.455 0.00 0.00 44.64 5.19
27 28 1.821216 ACTTAAACCGTGATGGGCTG 58.179 50.000 0.00 0.00 44.64 4.85
28 29 1.349688 ACTTAAACCGTGATGGGCTGA 59.650 47.619 0.00 0.00 44.64 4.26
29 30 2.009774 CTTAAACCGTGATGGGCTGAG 58.990 52.381 0.00 0.00 44.64 3.35
30 31 0.251916 TAAACCGTGATGGGCTGAGG 59.748 55.000 0.00 0.00 44.64 3.86
31 32 1.488705 AAACCGTGATGGGCTGAGGA 61.489 55.000 0.00 0.00 44.64 3.71
32 33 1.274703 AACCGTGATGGGCTGAGGAT 61.275 55.000 0.00 0.00 44.64 3.24
33 34 0.398522 ACCGTGATGGGCTGAGGATA 60.399 55.000 0.00 0.00 44.64 2.59
34 35 0.034059 CCGTGATGGGCTGAGGATAC 59.966 60.000 0.00 0.00 0.00 2.24
35 36 0.034059 CGTGATGGGCTGAGGATACC 59.966 60.000 0.00 0.00 37.17 2.73
36 37 1.131638 GTGATGGGCTGAGGATACCA 58.868 55.000 0.00 0.00 37.41 3.25
37 38 1.131638 TGATGGGCTGAGGATACCAC 58.868 55.000 0.00 0.00 35.52 4.16
38 39 1.131638 GATGGGCTGAGGATACCACA 58.868 55.000 0.00 0.00 35.52 4.17
39 40 1.490490 GATGGGCTGAGGATACCACAA 59.510 52.381 0.00 0.00 35.52 3.33
40 41 1.595311 TGGGCTGAGGATACCACAAT 58.405 50.000 0.00 0.00 37.17 2.71
41 42 1.922447 TGGGCTGAGGATACCACAATT 59.078 47.619 0.00 0.00 37.17 2.32
42 43 2.092429 TGGGCTGAGGATACCACAATTC 60.092 50.000 0.00 0.00 37.17 2.17
43 44 2.576615 GGCTGAGGATACCACAATTCC 58.423 52.381 0.00 0.00 37.17 3.01
44 45 2.173569 GGCTGAGGATACCACAATTCCT 59.826 50.000 0.00 0.00 42.58 3.36
50 51 5.632034 AGGATACCACAATTCCTCTAACC 57.368 43.478 0.00 0.00 34.80 2.85
51 52 5.036916 AGGATACCACAATTCCTCTAACCA 58.963 41.667 0.00 0.00 34.80 3.67
52 53 5.672194 AGGATACCACAATTCCTCTAACCAT 59.328 40.000 0.00 0.00 34.80 3.55
53 54 5.998363 GGATACCACAATTCCTCTAACCATC 59.002 44.000 0.00 0.00 0.00 3.51
54 55 4.236527 ACCACAATTCCTCTAACCATCC 57.763 45.455 0.00 0.00 0.00 3.51
55 56 3.591527 ACCACAATTCCTCTAACCATCCA 59.408 43.478 0.00 0.00 0.00 3.41
56 57 4.044065 ACCACAATTCCTCTAACCATCCAA 59.956 41.667 0.00 0.00 0.00 3.53
57 58 4.399303 CCACAATTCCTCTAACCATCCAAC 59.601 45.833 0.00 0.00 0.00 3.77
58 59 4.399303 CACAATTCCTCTAACCATCCAACC 59.601 45.833 0.00 0.00 0.00 3.77
59 60 4.044065 ACAATTCCTCTAACCATCCAACCA 59.956 41.667 0.00 0.00 0.00 3.67
60 61 3.713826 TTCCTCTAACCATCCAACCAC 57.286 47.619 0.00 0.00 0.00 4.16
61 62 2.626785 TCCTCTAACCATCCAACCACA 58.373 47.619 0.00 0.00 0.00 4.17
62 63 2.571653 TCCTCTAACCATCCAACCACAG 59.428 50.000 0.00 0.00 0.00 3.66
63 64 2.356125 CCTCTAACCATCCAACCACAGG 60.356 54.545 0.00 0.00 0.00 4.00
64 65 2.305927 CTCTAACCATCCAACCACAGGT 59.694 50.000 0.00 0.00 37.65 4.00
75 76 2.840974 CCACAGGTTGGTTCGCTAG 58.159 57.895 0.00 0.00 41.10 3.42
76 77 0.034896 CCACAGGTTGGTTCGCTAGT 59.965 55.000 0.00 0.00 41.10 2.57
77 78 1.148310 CACAGGTTGGTTCGCTAGTG 58.852 55.000 0.00 0.00 0.00 2.74
78 79 0.756903 ACAGGTTGGTTCGCTAGTGT 59.243 50.000 2.66 0.00 0.00 3.55
79 80 1.270147 ACAGGTTGGTTCGCTAGTGTC 60.270 52.381 2.66 0.00 0.00 3.67
80 81 1.000955 CAGGTTGGTTCGCTAGTGTCT 59.999 52.381 2.66 0.00 0.00 3.41
81 82 2.230508 CAGGTTGGTTCGCTAGTGTCTA 59.769 50.000 2.66 0.00 0.00 2.59
82 83 2.230750 AGGTTGGTTCGCTAGTGTCTAC 59.769 50.000 2.66 0.85 0.00 2.59
83 84 2.230750 GGTTGGTTCGCTAGTGTCTACT 59.769 50.000 2.66 0.00 40.99 2.57
84 85 3.500014 GTTGGTTCGCTAGTGTCTACTC 58.500 50.000 2.66 0.00 38.36 2.59
85 86 2.089980 TGGTTCGCTAGTGTCTACTCC 58.910 52.381 2.66 0.00 38.36 3.85
86 87 1.404748 GGTTCGCTAGTGTCTACTCCC 59.595 57.143 2.66 0.00 38.36 4.30
87 88 2.367486 GTTCGCTAGTGTCTACTCCCT 58.633 52.381 2.66 0.00 38.36 4.20
88 89 2.328819 TCGCTAGTGTCTACTCCCTC 57.671 55.000 2.66 0.00 38.36 4.30
89 90 1.134159 TCGCTAGTGTCTACTCCCTCC 60.134 57.143 2.66 0.00 38.36 4.30
90 91 1.310904 GCTAGTGTCTACTCCCTCCG 58.689 60.000 0.00 0.00 38.36 4.63
91 92 1.408544 GCTAGTGTCTACTCCCTCCGT 60.409 57.143 0.00 0.00 38.36 4.69
92 93 2.944991 GCTAGTGTCTACTCCCTCCGTT 60.945 54.545 0.00 0.00 38.36 4.44
93 94 1.836802 AGTGTCTACTCCCTCCGTTC 58.163 55.000 0.00 0.00 28.79 3.95
94 95 0.816373 GTGTCTACTCCCTCCGTTCC 59.184 60.000 0.00 0.00 0.00 3.62
95 96 0.406750 TGTCTACTCCCTCCGTTCCA 59.593 55.000 0.00 0.00 0.00 3.53
96 97 1.203087 TGTCTACTCCCTCCGTTCCAA 60.203 52.381 0.00 0.00 0.00 3.53
97 98 1.897802 GTCTACTCCCTCCGTTCCAAA 59.102 52.381 0.00 0.00 0.00 3.28
98 99 2.500504 GTCTACTCCCTCCGTTCCAAAT 59.499 50.000 0.00 0.00 0.00 2.32
99 100 3.055312 GTCTACTCCCTCCGTTCCAAATT 60.055 47.826 0.00 0.00 0.00 1.82
100 101 4.161001 GTCTACTCCCTCCGTTCCAAATTA 59.839 45.833 0.00 0.00 0.00 1.40
101 102 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
102 103 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
103 104 3.329814 ACTCCCTCCGTTCCAAATTACTT 59.670 43.478 0.00 0.00 0.00 2.24
104 105 3.681593 TCCCTCCGTTCCAAATTACTTG 58.318 45.455 0.00 0.00 34.52 3.16
105 106 3.328343 TCCCTCCGTTCCAAATTACTTGA 59.672 43.478 0.00 0.00 37.17 3.02
106 107 3.439129 CCCTCCGTTCCAAATTACTTGAC 59.561 47.826 0.00 0.00 37.17 3.18
107 108 3.439129 CCTCCGTTCCAAATTACTTGACC 59.561 47.826 0.00 0.00 37.17 4.02
108 109 3.414269 TCCGTTCCAAATTACTTGACCC 58.586 45.455 0.00 0.00 37.17 4.46
109 110 3.150767 CCGTTCCAAATTACTTGACCCA 58.849 45.455 0.00 0.00 37.17 4.51
110 111 3.761752 CCGTTCCAAATTACTTGACCCAT 59.238 43.478 0.00 0.00 37.17 4.00
111 112 4.944930 CCGTTCCAAATTACTTGACCCATA 59.055 41.667 0.00 0.00 37.17 2.74
112 113 5.592688 CCGTTCCAAATTACTTGACCCATAT 59.407 40.000 0.00 0.00 37.17 1.78
113 114 6.096282 CCGTTCCAAATTACTTGACCCATATT 59.904 38.462 0.00 0.00 37.17 1.28
114 115 7.363443 CCGTTCCAAATTACTTGACCCATATTT 60.363 37.037 0.00 0.00 37.17 1.40
115 116 8.679100 CGTTCCAAATTACTTGACCCATATTTA 58.321 33.333 0.00 0.00 37.17 1.40
125 126 7.736893 ACTTGACCCATATTTATCTAGACACC 58.263 38.462 0.00 0.00 0.00 4.16
126 127 6.340962 TGACCCATATTTATCTAGACACCG 57.659 41.667 0.00 0.00 0.00 4.94
127 128 6.072649 TGACCCATATTTATCTAGACACCGA 58.927 40.000 0.00 0.00 0.00 4.69
128 129 6.724441 TGACCCATATTTATCTAGACACCGAT 59.276 38.462 0.00 0.00 0.00 4.18
129 130 6.936279 ACCCATATTTATCTAGACACCGATG 58.064 40.000 0.00 0.00 0.00 3.84
130 131 6.497259 ACCCATATTTATCTAGACACCGATGT 59.503 38.462 0.00 0.00 43.71 3.06
131 132 7.672660 ACCCATATTTATCTAGACACCGATGTA 59.327 37.037 0.00 0.00 39.95 2.29
132 133 8.696374 CCCATATTTATCTAGACACCGATGTAT 58.304 37.037 0.00 0.00 39.95 2.29
133 134 9.737427 CCATATTTATCTAGACACCGATGTATC 57.263 37.037 0.00 0.00 39.95 2.24
137 138 9.961264 ATTTATCTAGACACCGATGTATCTAGA 57.039 33.333 10.03 10.03 42.25 2.43
138 139 8.774890 TTATCTAGACACCGATGTATCTAGAC 57.225 38.462 9.86 0.00 41.50 2.59
139 140 6.170846 TCTAGACACCGATGTATCTAGACA 57.829 41.667 4.59 0.00 37.36 3.41
140 141 5.990386 TCTAGACACCGATGTATCTAGACAC 59.010 44.000 4.59 0.00 37.36 3.67
141 142 4.783055 AGACACCGATGTATCTAGACACT 58.217 43.478 2.29 0.00 39.95 3.55
142 143 5.926663 AGACACCGATGTATCTAGACACTA 58.073 41.667 2.29 0.00 39.95 2.74
143 144 6.354938 AGACACCGATGTATCTAGACACTAA 58.645 40.000 2.29 0.00 39.95 2.24
144 145 6.827251 AGACACCGATGTATCTAGACACTAAA 59.173 38.462 2.29 0.00 39.95 1.85
145 146 6.793349 ACACCGATGTATCTAGACACTAAAC 58.207 40.000 2.29 0.00 37.26 2.01
146 147 6.376299 ACACCGATGTATCTAGACACTAAACA 59.624 38.462 2.29 0.00 37.26 2.83
147 148 7.094075 ACACCGATGTATCTAGACACTAAACAA 60.094 37.037 2.29 0.00 37.26 2.83
148 149 7.432545 CACCGATGTATCTAGACACTAAACAAG 59.567 40.741 2.29 0.00 30.52 3.16
149 150 7.122353 ACCGATGTATCTAGACACTAAACAAGT 59.878 37.037 2.29 0.00 39.81 3.16
150 151 8.618677 CCGATGTATCTAGACACTAAACAAGTA 58.381 37.037 2.29 0.00 35.76 2.24
162 163 9.395707 GACACTAAACAAGTATAGATACATCCG 57.604 37.037 2.66 0.00 35.76 4.18
163 164 8.910944 ACACTAAACAAGTATAGATACATCCGT 58.089 33.333 2.66 0.00 35.76 4.69
198 199 9.471084 AAATTTAAGTCAACTAATTTGGAACGG 57.529 29.630 0.00 0.00 35.69 4.44
199 200 7.804843 TTTAAGTCAACTAATTTGGAACGGA 57.195 32.000 0.00 0.00 35.69 4.69
200 201 5.941948 AAGTCAACTAATTTGGAACGGAG 57.058 39.130 0.00 0.00 35.69 4.63
201 202 4.324267 AGTCAACTAATTTGGAACGGAGG 58.676 43.478 0.00 0.00 35.69 4.30
202 203 3.439129 GTCAACTAATTTGGAACGGAGGG 59.561 47.826 0.00 0.00 35.69 4.30
203 204 3.328343 TCAACTAATTTGGAACGGAGGGA 59.672 43.478 0.00 0.00 35.69 4.20
204 205 3.629142 ACTAATTTGGAACGGAGGGAG 57.371 47.619 0.00 0.00 0.00 4.30
205 206 2.910977 ACTAATTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
206 207 4.098894 ACTAATTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
207 208 3.629142 AATTTGGAACGGAGGGAGTAG 57.371 47.619 0.00 0.00 0.00 2.57
208 209 0.611714 TTTGGAACGGAGGGAGTAGC 59.388 55.000 0.00 0.00 0.00 3.58
209 210 0.252103 TTGGAACGGAGGGAGTAGCT 60.252 55.000 0.00 0.00 0.00 3.32
210 211 0.252103 TGGAACGGAGGGAGTAGCTT 60.252 55.000 0.00 0.00 0.00 3.74
211 212 0.903236 GGAACGGAGGGAGTAGCTTT 59.097 55.000 0.00 0.00 0.00 3.51
212 213 2.105766 GGAACGGAGGGAGTAGCTTTA 58.894 52.381 0.00 0.00 0.00 1.85
213 214 2.498885 GGAACGGAGGGAGTAGCTTTAA 59.501 50.000 0.00 0.00 0.00 1.52
214 215 3.430513 GGAACGGAGGGAGTAGCTTTAAG 60.431 52.174 0.00 0.00 0.00 1.85
215 216 1.481363 ACGGAGGGAGTAGCTTTAAGC 59.519 52.381 9.18 9.18 42.84 3.09
228 229 3.831911 AGCTTTAAGCAACCAAATAGCCA 59.168 39.130 19.63 0.00 45.56 4.75
234 235 3.026694 AGCAACCAAATAGCCAGAATCC 58.973 45.455 0.00 0.00 0.00 3.01
280 284 1.003223 CGACTTGGTTTGGTTTCGGTC 60.003 52.381 0.00 0.00 0.00 4.79
300 304 1.001378 CTTCGGTTTGAAAGTGCCCAG 60.001 52.381 0.00 0.00 35.79 4.45
304 308 1.115326 GTTTGAAAGTGCCCAGCCCT 61.115 55.000 0.00 0.00 0.00 5.19
305 309 0.480690 TTTGAAAGTGCCCAGCCCTA 59.519 50.000 0.00 0.00 0.00 3.53
306 310 0.038166 TTGAAAGTGCCCAGCCCTAG 59.962 55.000 0.00 0.00 0.00 3.02
307 311 1.077429 GAAAGTGCCCAGCCCTAGG 60.077 63.158 0.06 0.06 0.00 3.02
308 312 1.852626 AAAGTGCCCAGCCCTAGGT 60.853 57.895 8.29 0.00 0.00 3.08
309 313 0.549169 AAAGTGCCCAGCCCTAGGTA 60.549 55.000 8.29 0.00 0.00 3.08
321 325 1.548128 CCCTAGGTAGATGGGAGACGG 60.548 61.905 8.29 0.00 43.47 4.79
333 337 1.748122 GAGACGGGTCTCGCTGGTA 60.748 63.158 12.62 0.00 45.49 3.25
334 338 1.991099 GAGACGGGTCTCGCTGGTAC 61.991 65.000 12.62 0.00 45.49 3.34
335 339 3.392595 GACGGGTCTCGCTGGTACG 62.393 68.421 0.00 0.00 43.89 3.67
343 347 2.043625 TCGCTGGTACGAGGTGTTT 58.956 52.632 7.03 0.00 37.09 2.83
344 348 0.038892 TCGCTGGTACGAGGTGTTTC 60.039 55.000 7.03 0.00 37.09 2.78
391 398 1.202639 ACGGTCAAACACAGCAGATCA 60.203 47.619 0.00 0.00 0.00 2.92
680 689 3.633094 GAGCCGAGACGAAGCTGCA 62.633 63.158 1.02 0.00 36.87 4.41
802 811 1.757118 CCAATCCTCACTCTTCGCCTA 59.243 52.381 0.00 0.00 0.00 3.93
847 856 2.949451 TCTCAGCTCAAGATTCGGTC 57.051 50.000 0.00 0.00 0.00 4.79
853 862 1.066143 GCTCAAGATTCGGTCCCAAGA 60.066 52.381 0.00 0.00 0.00 3.02
887 896 2.431260 GTTGCGCATGGTGGCTTG 60.431 61.111 12.75 0.00 0.00 4.01
902 911 3.064820 GTGGCTTGTGTATGATTAACCCG 59.935 47.826 0.00 0.00 0.00 5.28
905 914 3.275143 CTTGTGTATGATTAACCCGGCA 58.725 45.455 0.00 0.00 0.00 5.69
913 922 4.752879 TAACCCGGCAGCGCTGAC 62.753 66.667 40.21 37.11 37.02 3.51
935 950 4.638865 ACGCATAGTTGGGGAATTTAGTTC 59.361 41.667 0.00 0.00 39.98 3.01
1164 1180 2.035783 GGGGAGGGGTGCAGTTTC 59.964 66.667 0.00 0.00 0.00 2.78
1178 1194 2.110835 TTTCGGTGCTGCTGCTGA 59.889 55.556 17.00 9.07 40.48 4.26
1179 1195 2.253758 TTTCGGTGCTGCTGCTGAC 61.254 57.895 17.00 7.29 40.48 3.51
1180 1196 2.939133 TTTCGGTGCTGCTGCTGACA 62.939 55.000 17.00 5.27 40.48 3.58
1182 1198 2.952245 GGTGCTGCTGCTGACAAG 59.048 61.111 17.00 0.00 40.48 3.16
1183 1199 1.598962 GGTGCTGCTGCTGACAAGA 60.599 57.895 17.00 0.00 40.48 3.02
1184 1200 1.575576 GGTGCTGCTGCTGACAAGAG 61.576 60.000 17.00 0.00 40.48 2.85
1215 1231 1.316706 GGAGGAGGAGAGTCACCACG 61.317 65.000 9.44 0.00 0.00 4.94
1263 1282 6.545508 CAACACTGCGATTCATAATGAAAGA 58.454 36.000 0.00 0.00 40.12 2.52
1265 1284 7.144722 ACACTGCGATTCATAATGAAAGAAA 57.855 32.000 0.00 0.00 40.12 2.52
1273 1292 9.079833 CGATTCATAATGAAAGAAATGCTGTTT 57.920 29.630 0.00 0.00 40.12 2.83
1378 1397 4.819761 GCTGCCACGCGGATCTCA 62.820 66.667 12.47 0.00 37.02 3.27
1493 1512 1.673665 AGCAGTGCAGCAGGTTAGC 60.674 57.895 19.20 0.00 36.85 3.09
1538 1557 9.974980 TGTCTAAGCTTTTTATGGTTTAAAAGG 57.025 29.630 3.20 2.33 40.18 3.11
1759 1784 5.337554 TGTAAGTTTCTCGGATCGTATGTG 58.662 41.667 0.00 0.00 0.00 3.21
1764 1789 0.248907 CTCGGATCGTATGTGCGGTT 60.249 55.000 0.00 0.00 0.00 4.44
1770 1795 0.315886 TCGTATGTGCGGTTCAGTGT 59.684 50.000 0.00 0.00 0.00 3.55
1785 1810 8.178964 GCGGTTCAGTGTTATACATTGATTTTA 58.821 33.333 5.96 0.00 42.97 1.52
1801 1828 8.693504 CATTGATTTTATTGGTTCATATGCGAC 58.306 33.333 0.00 0.00 0.00 5.19
1879 1916 3.703052 AGCAAATCAATGGTCCCAATCTC 59.297 43.478 0.00 0.00 0.00 2.75
2242 2282 6.644347 ACTAATTGTGTCTTAGCTGCAGTAT 58.356 36.000 16.64 7.21 30.80 2.12
2373 2413 8.546083 TTACCATATGCAAATTGGGAATAGTT 57.454 30.769 15.04 0.00 34.72 2.24
2395 2466 7.936584 AGTTCCTCTCTTGATAAATCTACTCG 58.063 38.462 0.00 0.00 0.00 4.18
2406 2477 8.475331 TGATAAATCTACTCGAGTTTTTGGAC 57.525 34.615 25.44 14.99 31.52 4.02
2413 2484 5.592104 ACTCGAGTTTTTGGACCAAATTT 57.408 34.783 20.22 8.98 33.19 1.82
2415 2486 6.403049 ACTCGAGTTTTTGGACCAAATTTTT 58.597 32.000 20.22 6.94 33.19 1.94
2416 2487 6.312672 ACTCGAGTTTTTGGACCAAATTTTTG 59.687 34.615 20.22 11.84 33.19 2.44
2477 2548 5.604231 TCCAAGTGACATGGAGAGCTATATT 59.396 40.000 5.29 0.00 41.98 1.28
2533 2604 2.092914 GTCTTCCTAACTGGATGTGGGG 60.093 54.545 0.00 0.00 45.68 4.96
2544 2615 0.828677 GATGTGGGGTAAGGTAGCGT 59.171 55.000 0.00 0.00 0.00 5.07
2545 2616 0.828677 ATGTGGGGTAAGGTAGCGTC 59.171 55.000 0.00 0.00 0.00 5.19
2556 2627 3.461946 AGGTAGCGTCGCGTTATATAC 57.538 47.619 12.30 7.50 0.00 1.47
2557 2628 2.807967 AGGTAGCGTCGCGTTATATACA 59.192 45.455 12.30 0.00 0.00 2.29
2566 2637 6.521133 GCGTCGCGTTATATACAAATACTAGT 59.479 38.462 5.77 0.00 0.00 2.57
2600 2671 8.584157 ACATGCTTATCTCTTCTCTATGGTTAG 58.416 37.037 0.00 0.00 0.00 2.34
2601 2672 6.987386 TGCTTATCTCTTCTCTATGGTTAGC 58.013 40.000 0.00 0.00 0.00 3.09
2650 2721 7.335924 TCAAATAGCAAAACCTAAGCTACGAAT 59.664 33.333 0.00 0.00 42.94 3.34
2688 2759 8.894768 AGCATAATCCTCACTTACTGTTATTC 57.105 34.615 0.00 0.00 0.00 1.75
2696 2767 9.847224 TCCTCACTTACTGTTATTCTTCTTTTT 57.153 29.630 0.00 0.00 0.00 1.94
2839 2910 5.367302 ACATTAAGCTGCAATGGTTTGTTT 58.633 33.333 19.91 1.26 37.64 2.83
2844 2915 2.137523 CTGCAATGGTTTGTTTGCCTC 58.862 47.619 5.30 0.00 45.94 4.70
2876 2952 8.840321 TCTCTTTACATCCTTGTTCTTTTTCTG 58.160 33.333 0.00 0.00 37.28 3.02
2901 2977 8.727910 TGTTTTTATATACATACGCAACCAACA 58.272 29.630 0.00 0.00 0.00 3.33
2909 2985 1.283793 CGCAACCAACAGCTTCCTG 59.716 57.895 0.00 0.00 44.80 3.86
2963 3039 0.537188 ATGTTAGTGTCTCCCTGGCG 59.463 55.000 0.00 0.00 0.00 5.69
3039 3115 4.201881 GCCTATAATTCGACGGCAAACTTT 60.202 41.667 0.00 0.00 40.41 2.66
3081 3157 3.626930 AGCTCAACCAACCACAAAGTAA 58.373 40.909 0.00 0.00 0.00 2.24
3138 3214 6.434028 CCTGACCTGGATTTTATTTGACTGAA 59.566 38.462 0.00 0.00 0.00 3.02
3139 3215 7.123247 CCTGACCTGGATTTTATTTGACTGAAT 59.877 37.037 0.00 0.00 0.00 2.57
3179 3255 8.141909 TCGTTCCAGATTACTCTGTATATTTGG 58.858 37.037 9.05 0.00 46.33 3.28
3221 3297 5.043248 AGAAGCAACACAAAAACTACATGC 58.957 37.500 0.00 0.00 0.00 4.06
3771 3863 0.615331 ATGTCGCCTCACCAGTTGAT 59.385 50.000 0.00 0.00 32.17 2.57
3928 4020 0.603707 CACGCCTGACATGACTGGTT 60.604 55.000 19.06 7.10 0.00 3.67
4025 4117 0.893727 CCCCAACAGGTACTTGCACC 60.894 60.000 4.65 0.00 34.60 5.01
4040 4132 1.482182 TGCACCGAACTCTCATGCTAT 59.518 47.619 0.00 0.00 35.35 2.97
4073 4167 9.350357 CCTGAATTGATAAATTCTCAACAACTG 57.650 33.333 15.29 5.32 39.33 3.16
4089 4183 4.314121 ACAACTGCAACAACAACAACAAT 58.686 34.783 0.00 0.00 0.00 2.71
4092 4186 6.128688 ACAACTGCAACAACAACAACAATAAC 60.129 34.615 0.00 0.00 0.00 1.89
4093 4187 5.473931 ACTGCAACAACAACAACAATAACA 58.526 33.333 0.00 0.00 0.00 2.41
4094 4188 5.928839 ACTGCAACAACAACAACAATAACAA 59.071 32.000 0.00 0.00 0.00 2.83
4095 4189 6.128688 ACTGCAACAACAACAACAATAACAAC 60.129 34.615 0.00 0.00 0.00 3.32
4096 4190 5.696270 TGCAACAACAACAACAATAACAACA 59.304 32.000 0.00 0.00 0.00 3.33
4097 4191 6.202762 TGCAACAACAACAACAATAACAACAA 59.797 30.769 0.00 0.00 0.00 2.83
4098 4192 7.072030 GCAACAACAACAACAATAACAACAAA 58.928 30.769 0.00 0.00 0.00 2.83
4099 4193 7.587757 GCAACAACAACAACAATAACAACAAAA 59.412 29.630 0.00 0.00 0.00 2.44
4100 4194 9.604626 CAACAACAACAACAATAACAACAAAAT 57.395 25.926 0.00 0.00 0.00 1.82
4103 4197 9.695884 CAACAACAACAATAACAACAAAATACC 57.304 29.630 0.00 0.00 0.00 2.73
4104 4198 9.436957 AACAACAACAATAACAACAAAATACCA 57.563 25.926 0.00 0.00 0.00 3.25
4177 4271 3.073678 TCGGTGTTGGATCAAAGACATG 58.926 45.455 11.92 4.23 0.00 3.21
4222 4316 3.225104 TCTGCTTGCAACATTTTCTCCT 58.775 40.909 0.00 0.00 0.00 3.69
4230 4324 5.976458 TGCAACATTTTCTCCTTGTCTTTT 58.024 33.333 0.00 0.00 0.00 2.27
4231 4325 7.106439 TGCAACATTTTCTCCTTGTCTTTTA 57.894 32.000 0.00 0.00 0.00 1.52
4232 4326 6.978080 TGCAACATTTTCTCCTTGTCTTTTAC 59.022 34.615 0.00 0.00 0.00 2.01
4233 4327 7.147915 TGCAACATTTTCTCCTTGTCTTTTACT 60.148 33.333 0.00 0.00 0.00 2.24
4234 4328 7.379797 GCAACATTTTCTCCTTGTCTTTTACTC 59.620 37.037 0.00 0.00 0.00 2.59
4235 4329 7.511959 ACATTTTCTCCTTGTCTTTTACTCC 57.488 36.000 0.00 0.00 0.00 3.85
4236 4330 6.490381 ACATTTTCTCCTTGTCTTTTACTCCC 59.510 38.462 0.00 0.00 0.00 4.30
4237 4331 5.906772 TTTCTCCTTGTCTTTTACTCCCT 57.093 39.130 0.00 0.00 0.00 4.20
4238 4332 5.485209 TTCTCCTTGTCTTTTACTCCCTC 57.515 43.478 0.00 0.00 0.00 4.30
4239 4333 3.838903 TCTCCTTGTCTTTTACTCCCTCC 59.161 47.826 0.00 0.00 0.00 4.30
4240 4334 2.565834 TCCTTGTCTTTTACTCCCTCCG 59.434 50.000 0.00 0.00 0.00 4.63
4241 4335 2.302157 CCTTGTCTTTTACTCCCTCCGT 59.698 50.000 0.00 0.00 0.00 4.69
4242 4336 3.586892 CTTGTCTTTTACTCCCTCCGTC 58.413 50.000 0.00 0.00 0.00 4.79
4243 4337 1.897802 TGTCTTTTACTCCCTCCGTCC 59.102 52.381 0.00 0.00 0.00 4.79
4244 4338 1.206610 GTCTTTTACTCCCTCCGTCCC 59.793 57.143 0.00 0.00 0.00 4.46
4245 4339 1.203212 TCTTTTACTCCCTCCGTCCCA 60.203 52.381 0.00 0.00 0.00 4.37
4246 4340 1.626825 CTTTTACTCCCTCCGTCCCAA 59.373 52.381 0.00 0.00 0.00 4.12
4247 4341 1.732117 TTTACTCCCTCCGTCCCAAA 58.268 50.000 0.00 0.00 0.00 3.28
4248 4342 1.732117 TTACTCCCTCCGTCCCAAAA 58.268 50.000 0.00 0.00 0.00 2.44
4249 4343 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
4250 4344 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
4251 4345 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
4252 4346 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
4253 4347 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
4254 4348 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
4255 4349 2.026636 CCCTCCGTCCCAAAATAAGTGA 60.027 50.000 0.00 0.00 0.00 3.41
4256 4350 3.007635 CCTCCGTCCCAAAATAAGTGAC 58.992 50.000 0.00 0.00 0.00 3.67
4257 4351 3.307480 CCTCCGTCCCAAAATAAGTGACT 60.307 47.826 0.00 0.00 0.00 3.41
4258 4352 3.933332 CTCCGTCCCAAAATAAGTGACTC 59.067 47.826 0.00 0.00 0.00 3.36
4259 4353 3.325425 TCCGTCCCAAAATAAGTGACTCA 59.675 43.478 0.00 0.00 0.00 3.41
4260 4354 4.069304 CCGTCCCAAAATAAGTGACTCAA 58.931 43.478 0.00 0.00 0.00 3.02
4261 4355 4.154195 CCGTCCCAAAATAAGTGACTCAAG 59.846 45.833 0.00 0.00 0.00 3.02
4262 4356 4.755123 CGTCCCAAAATAAGTGACTCAAGT 59.245 41.667 0.00 0.00 0.00 3.16
4263 4357 5.238650 CGTCCCAAAATAAGTGACTCAAGTT 59.761 40.000 0.00 0.00 0.00 2.66
4264 4358 6.238648 CGTCCCAAAATAAGTGACTCAAGTTT 60.239 38.462 0.00 0.00 0.00 2.66
4265 4359 6.918022 GTCCCAAAATAAGTGACTCAAGTTTG 59.082 38.462 11.50 11.50 0.00 2.93
4266 4360 6.605594 TCCCAAAATAAGTGACTCAAGTTTGT 59.394 34.615 15.07 0.00 0.00 2.83
4267 4361 7.776030 TCCCAAAATAAGTGACTCAAGTTTGTA 59.224 33.333 15.07 5.29 0.00 2.41
4268 4362 7.860872 CCCAAAATAAGTGACTCAAGTTTGTAC 59.139 37.037 15.07 0.00 0.00 2.90
4269 4363 8.621286 CCAAAATAAGTGACTCAAGTTTGTACT 58.379 33.333 15.07 0.00 35.68 2.73
4275 4369 8.788325 AAGTGACTCAAGTTTGTACTAACTTT 57.212 30.769 26.14 15.97 43.85 2.66
4276 4370 8.197988 AGTGACTCAAGTTTGTACTAACTTTG 57.802 34.615 26.14 22.84 43.85 2.77
4277 4371 7.822822 AGTGACTCAAGTTTGTACTAACTTTGT 59.177 33.333 26.14 25.01 43.85 2.83
4278 4372 9.090692 GTGACTCAAGTTTGTACTAACTTTGTA 57.909 33.333 26.14 16.32 43.85 2.41
4279 4373 9.090692 TGACTCAAGTTTGTACTAACTTTGTAC 57.909 33.333 26.14 19.04 43.85 2.90
4280 4374 9.310716 GACTCAAGTTTGTACTAACTTTGTACT 57.689 33.333 26.14 11.72 43.85 2.73
4304 4398 9.310716 ACTAAAGTTAGTACAAAGTTGAGTCAC 57.689 33.333 1.81 0.00 41.92 3.67
4305 4399 9.530633 CTAAAGTTAGTACAAAGTTGAGTCACT 57.469 33.333 0.00 0.00 0.00 3.41
4306 4400 8.788325 AAAGTTAGTACAAAGTTGAGTCACTT 57.212 30.769 0.00 0.00 38.74 3.16
4307 4401 9.880157 AAAGTTAGTACAAAGTTGAGTCACTTA 57.120 29.630 0.00 0.00 35.87 2.24
4313 4407 8.621286 AGTACAAAGTTGAGTCACTTATTTTGG 58.379 33.333 12.94 0.78 35.87 3.28
4314 4408 7.639113 ACAAAGTTGAGTCACTTATTTTGGA 57.361 32.000 12.94 0.00 35.87 3.53
4315 4409 8.062065 ACAAAGTTGAGTCACTTATTTTGGAA 57.938 30.769 12.94 0.00 35.87 3.53
4316 4410 7.973944 ACAAAGTTGAGTCACTTATTTTGGAAC 59.026 33.333 12.94 0.00 35.87 3.62
4317 4411 6.300354 AGTTGAGTCACTTATTTTGGAACG 57.700 37.500 0.00 0.00 0.00 3.95
4318 4412 5.238650 AGTTGAGTCACTTATTTTGGAACGG 59.761 40.000 0.00 0.00 0.00 4.44
4319 4413 4.963373 TGAGTCACTTATTTTGGAACGGA 58.037 39.130 0.00 0.00 0.00 4.69
4320 4414 4.994852 TGAGTCACTTATTTTGGAACGGAG 59.005 41.667 0.00 0.00 0.00 4.63
4321 4415 4.324267 AGTCACTTATTTTGGAACGGAGG 58.676 43.478 0.00 0.00 0.00 4.30
4322 4416 3.439129 GTCACTTATTTTGGAACGGAGGG 59.561 47.826 0.00 0.00 0.00 4.30
4323 4417 3.328343 TCACTTATTTTGGAACGGAGGGA 59.672 43.478 0.00 0.00 0.00 4.20
4324 4418 3.689649 CACTTATTTTGGAACGGAGGGAG 59.310 47.826 0.00 0.00 0.00 4.30
4333 4427 4.355549 TGGAACGGAGGGAGTATTTTCTA 58.644 43.478 0.00 0.00 0.00 2.10
4396 4490 2.435938 TGGAAGAATGCCCGCGAC 60.436 61.111 8.23 0.00 24.52 5.19
4463 4557 2.099263 ACGTCCTACATCAAGATGGTCG 59.901 50.000 14.04 8.49 42.91 4.79
4504 4598 2.196997 TACCTGCAGCCCATGTGTCC 62.197 60.000 8.66 0.00 0.00 4.02
4508 4602 2.981560 GCAGCCCATGTGTCCGTTG 61.982 63.158 0.00 0.00 0.00 4.10
4525 4619 3.064324 GCCATGACCACCACTGGC 61.064 66.667 0.00 0.00 42.08 4.85
4541 4635 2.560861 GCATCGCCGAAAAGCACA 59.439 55.556 0.00 0.00 0.00 4.57
4548 4642 0.874390 GCCGAAAAGCACACAGATGA 59.126 50.000 0.00 0.00 0.00 2.92
4549 4643 1.400242 GCCGAAAAGCACACAGATGAC 60.400 52.381 0.00 0.00 0.00 3.06
4570 4664 0.108804 GTCGGCCGAGATCAACTGAA 60.109 55.000 31.97 0.00 0.00 3.02
5007 5110 4.327982 TGAGAGAAACAGTCACAAGAGG 57.672 45.455 0.00 0.00 0.00 3.69
5011 5114 0.468226 AAACAGTCACAAGAGGCCGA 59.532 50.000 0.00 0.00 0.00 5.54
5012 5115 0.249911 AACAGTCACAAGAGGCCGAC 60.250 55.000 0.00 0.00 0.00 4.79
5030 5138 2.399580 GACATACCTTCCTACTGGCCT 58.600 52.381 3.32 0.00 0.00 5.19
5033 5141 1.327690 TACCTTCCTACTGGCCTGCG 61.328 60.000 9.95 0.95 0.00 5.18
5034 5142 2.660064 CCTTCCTACTGGCCTGCGT 61.660 63.158 9.95 3.84 0.00 5.24
5036 5144 2.172483 CTTCCTACTGGCCTGCGTGT 62.172 60.000 9.95 0.61 0.00 4.49
5049 5157 1.708027 GCGTGTATCACCTCGCAAC 59.292 57.895 0.00 0.00 46.40 4.17
5057 5165 1.739562 CACCTCGCAACTCTCTGCC 60.740 63.158 0.00 0.00 39.26 4.85
5093 5201 0.937304 CGATATTTGGTCAGCGGGTG 59.063 55.000 0.00 0.00 0.00 4.61
5094 5202 1.742411 CGATATTTGGTCAGCGGGTGT 60.742 52.381 7.12 0.00 0.00 4.16
5095 5203 2.482316 CGATATTTGGTCAGCGGGTGTA 60.482 50.000 7.12 0.00 0.00 2.90
5096 5204 2.684001 TATTTGGTCAGCGGGTGTAG 57.316 50.000 7.12 0.00 0.00 2.74
5097 5205 0.981183 ATTTGGTCAGCGGGTGTAGA 59.019 50.000 7.12 0.00 0.00 2.59
5098 5206 0.759959 TTTGGTCAGCGGGTGTAGAA 59.240 50.000 7.12 0.00 0.00 2.10
5099 5207 0.981183 TTGGTCAGCGGGTGTAGAAT 59.019 50.000 7.12 0.00 0.00 2.40
5100 5208 0.535335 TGGTCAGCGGGTGTAGAATC 59.465 55.000 7.12 0.00 0.00 2.52
5101 5209 0.527817 GGTCAGCGGGTGTAGAATCG 60.528 60.000 7.12 0.00 0.00 3.34
5102 5210 0.527817 GTCAGCGGGTGTAGAATCGG 60.528 60.000 7.12 0.00 0.00 4.18
5103 5211 1.227263 CAGCGGGTGTAGAATCGGG 60.227 63.158 0.00 0.00 0.00 5.14
5104 5212 2.108362 GCGGGTGTAGAATCGGGG 59.892 66.667 0.00 0.00 0.00 5.73
5105 5213 2.428925 GCGGGTGTAGAATCGGGGA 61.429 63.158 0.00 0.00 0.00 4.81
5106 5214 1.740285 CGGGTGTAGAATCGGGGAG 59.260 63.158 0.00 0.00 0.00 4.30
5107 5215 0.754217 CGGGTGTAGAATCGGGGAGA 60.754 60.000 0.00 0.00 0.00 3.71
5108 5216 1.041437 GGGTGTAGAATCGGGGAGAG 58.959 60.000 0.00 0.00 0.00 3.20
5109 5217 1.411216 GGGTGTAGAATCGGGGAGAGA 60.411 57.143 0.00 0.00 0.00 3.10
5110 5218 1.957877 GGTGTAGAATCGGGGAGAGAG 59.042 57.143 0.00 0.00 0.00 3.20
5111 5219 2.423088 GGTGTAGAATCGGGGAGAGAGA 60.423 54.545 0.00 0.00 0.00 3.10
5112 5220 2.882137 GTGTAGAATCGGGGAGAGAGAG 59.118 54.545 0.00 0.00 0.00 3.20
5113 5221 2.158593 TGTAGAATCGGGGAGAGAGAGG 60.159 54.545 0.00 0.00 0.00 3.69
5114 5222 0.187361 AGAATCGGGGAGAGAGAGGG 59.813 60.000 0.00 0.00 0.00 4.30
5115 5223 0.186386 GAATCGGGGAGAGAGAGGGA 59.814 60.000 0.00 0.00 0.00 4.20
5116 5224 0.187361 AATCGGGGAGAGAGAGGGAG 59.813 60.000 0.00 0.00 0.00 4.30
5117 5225 0.699577 ATCGGGGAGAGAGAGGGAGA 60.700 60.000 0.00 0.00 0.00 3.71
5118 5226 1.150536 CGGGGAGAGAGAGGGAGAG 59.849 68.421 0.00 0.00 0.00 3.20
5119 5227 1.349542 CGGGGAGAGAGAGGGAGAGA 61.350 65.000 0.00 0.00 0.00 3.10
5120 5228 0.478507 GGGGAGAGAGAGGGAGAGAG 59.521 65.000 0.00 0.00 0.00 3.20
5121 5229 1.518367 GGGAGAGAGAGGGAGAGAGA 58.482 60.000 0.00 0.00 0.00 3.10
5122 5230 1.421646 GGGAGAGAGAGGGAGAGAGAG 59.578 61.905 0.00 0.00 0.00 3.20
5123 5231 2.408565 GGAGAGAGAGGGAGAGAGAGA 58.591 57.143 0.00 0.00 0.00 3.10
5124 5232 2.370189 GGAGAGAGAGGGAGAGAGAGAG 59.630 59.091 0.00 0.00 0.00 3.20
5125 5233 3.041946 GAGAGAGAGGGAGAGAGAGAGT 58.958 54.545 0.00 0.00 0.00 3.24
5126 5234 4.223953 GAGAGAGAGGGAGAGAGAGAGTA 58.776 52.174 0.00 0.00 0.00 2.59
5127 5235 3.967987 AGAGAGAGGGAGAGAGAGAGTAC 59.032 52.174 0.00 0.00 0.00 2.73
5128 5236 3.046374 AGAGAGGGAGAGAGAGAGTACC 58.954 54.545 0.00 0.00 0.00 3.34
5129 5237 3.046374 GAGAGGGAGAGAGAGAGTACCT 58.954 54.545 0.00 0.00 0.00 3.08
5130 5238 4.078219 AGAGAGGGAGAGAGAGAGTACCTA 60.078 50.000 0.00 0.00 0.00 3.08
5131 5239 3.971971 AGAGGGAGAGAGAGAGTACCTAC 59.028 52.174 0.00 0.00 0.00 3.18
5132 5240 3.712733 GAGGGAGAGAGAGAGTACCTACA 59.287 52.174 0.00 0.00 0.00 2.74
5133 5241 3.714798 AGGGAGAGAGAGAGTACCTACAG 59.285 52.174 0.00 0.00 0.00 2.74
5134 5242 3.712733 GGGAGAGAGAGAGTACCTACAGA 59.287 52.174 0.00 0.00 0.00 3.41
5135 5243 4.202326 GGGAGAGAGAGAGTACCTACAGAG 60.202 54.167 0.00 0.00 0.00 3.35
5136 5244 4.652421 GGAGAGAGAGAGTACCTACAGAGA 59.348 50.000 0.00 0.00 0.00 3.10
5137 5245 5.452917 GGAGAGAGAGAGTACCTACAGAGAC 60.453 52.000 0.00 0.00 0.00 3.36
5138 5246 5.278061 AGAGAGAGAGTACCTACAGAGACT 58.722 45.833 0.00 0.00 0.00 3.24
5139 5247 5.363005 AGAGAGAGAGTACCTACAGAGACTC 59.637 48.000 0.00 0.00 38.89 3.36
5140 5248 4.407945 AGAGAGAGTACCTACAGAGACTCC 59.592 50.000 0.00 0.00 39.33 3.85
5141 5249 4.368067 AGAGAGTACCTACAGAGACTCCT 58.632 47.826 0.00 0.00 39.33 3.69
5142 5250 4.786454 AGAGAGTACCTACAGAGACTCCTT 59.214 45.833 0.00 0.00 39.33 3.36
5143 5251 4.850680 AGAGTACCTACAGAGACTCCTTG 58.149 47.826 0.00 0.00 39.33 3.61
5144 5252 4.536888 AGAGTACCTACAGAGACTCCTTGA 59.463 45.833 0.00 0.00 39.33 3.02
5145 5253 4.850680 AGTACCTACAGAGACTCCTTGAG 58.149 47.826 0.00 0.00 35.52 3.02
5146 5254 2.452505 ACCTACAGAGACTCCTTGAGC 58.547 52.381 0.00 0.00 32.04 4.26
5147 5255 1.754226 CCTACAGAGACTCCTTGAGCC 59.246 57.143 0.00 0.00 32.04 4.70
5148 5256 2.622977 CCTACAGAGACTCCTTGAGCCT 60.623 54.545 0.00 0.00 32.04 4.58
5149 5257 2.022718 ACAGAGACTCCTTGAGCCTT 57.977 50.000 0.00 0.00 32.04 4.35
5150 5258 1.899142 ACAGAGACTCCTTGAGCCTTC 59.101 52.381 0.00 0.00 32.04 3.46
5151 5259 2.178580 CAGAGACTCCTTGAGCCTTCT 58.821 52.381 0.00 0.00 32.04 2.85
5152 5260 2.166254 CAGAGACTCCTTGAGCCTTCTC 59.834 54.545 0.00 3.33 39.78 2.87
5153 5261 2.042979 AGAGACTCCTTGAGCCTTCTCT 59.957 50.000 0.00 6.82 40.03 3.10
5154 5262 2.427095 GAGACTCCTTGAGCCTTCTCTC 59.573 54.545 0.00 0.21 40.03 3.20
5155 5263 2.042979 AGACTCCTTGAGCCTTCTCTCT 59.957 50.000 0.00 0.00 40.03 3.10
5156 5264 2.166254 GACTCCTTGAGCCTTCTCTCTG 59.834 54.545 0.00 0.00 40.03 3.35
5157 5265 1.481772 CTCCTTGAGCCTTCTCTCTGG 59.518 57.143 0.00 0.00 40.03 3.86
5158 5266 1.203237 TCCTTGAGCCTTCTCTCTGGT 60.203 52.381 0.00 0.00 40.03 4.00
5159 5267 1.627834 CCTTGAGCCTTCTCTCTGGTT 59.372 52.381 0.00 0.00 40.03 3.67
5160 5268 2.354604 CCTTGAGCCTTCTCTCTGGTTC 60.355 54.545 0.00 0.00 40.03 3.62
5161 5269 2.317371 TGAGCCTTCTCTCTGGTTCT 57.683 50.000 0.00 0.00 40.03 3.01
5162 5270 2.175202 TGAGCCTTCTCTCTGGTTCTC 58.825 52.381 0.00 0.00 40.03 2.87
5163 5271 2.225242 TGAGCCTTCTCTCTGGTTCTCT 60.225 50.000 0.00 0.00 40.03 3.10
5164 5272 2.166254 GAGCCTTCTCTCTGGTTCTCTG 59.834 54.545 0.00 0.00 36.42 3.35
5165 5273 1.405391 GCCTTCTCTCTGGTTCTCTGC 60.405 57.143 0.00 0.00 0.00 4.26
5166 5274 1.135141 CCTTCTCTCTGGTTCTCTGCG 60.135 57.143 0.00 0.00 0.00 5.18
5167 5275 1.543802 CTTCTCTCTGGTTCTCTGCGT 59.456 52.381 0.00 0.00 0.00 5.24
5168 5276 0.884514 TCTCTCTGGTTCTCTGCGTG 59.115 55.000 0.00 0.00 0.00 5.34
5169 5277 0.884514 CTCTCTGGTTCTCTGCGTGA 59.115 55.000 0.00 0.00 0.00 4.35
5170 5278 0.884514 TCTCTGGTTCTCTGCGTGAG 59.115 55.000 0.64 0.64 43.96 3.51
5171 5279 0.600557 CTCTGGTTCTCTGCGTGAGT 59.399 55.000 6.46 0.00 43.13 3.41
5172 5280 1.813178 CTCTGGTTCTCTGCGTGAGTA 59.187 52.381 6.46 0.00 43.13 2.59
5173 5281 1.540267 TCTGGTTCTCTGCGTGAGTAC 59.460 52.381 6.46 6.99 43.13 2.73
5175 5283 3.420397 GTTCTCTGCGTGAGTACCC 57.580 57.895 6.46 0.00 43.13 3.69
5176 5284 0.889306 GTTCTCTGCGTGAGTACCCT 59.111 55.000 6.46 0.00 43.13 4.34
5177 5285 0.888619 TTCTCTGCGTGAGTACCCTG 59.111 55.000 6.46 0.00 43.13 4.45
5178 5286 0.251209 TCTCTGCGTGAGTACCCTGT 60.251 55.000 6.46 0.00 43.13 4.00
5179 5287 0.109086 CTCTGCGTGAGTACCCTGTG 60.109 60.000 0.00 0.00 37.99 3.66
5180 5288 0.826256 TCTGCGTGAGTACCCTGTGT 60.826 55.000 0.00 0.00 0.00 3.72
5181 5289 0.667487 CTGCGTGAGTACCCTGTGTG 60.667 60.000 0.00 0.00 0.00 3.82
5182 5290 1.366366 GCGTGAGTACCCTGTGTGT 59.634 57.895 0.00 0.00 0.00 3.72
5183 5291 0.944311 GCGTGAGTACCCTGTGTGTG 60.944 60.000 0.00 0.00 0.00 3.82
5184 5292 0.387929 CGTGAGTACCCTGTGTGTGT 59.612 55.000 0.00 0.00 0.00 3.72
5185 5293 1.865865 GTGAGTACCCTGTGTGTGTG 58.134 55.000 0.00 0.00 0.00 3.82
5186 5294 1.411246 GTGAGTACCCTGTGTGTGTGA 59.589 52.381 0.00 0.00 0.00 3.58
5187 5295 1.411246 TGAGTACCCTGTGTGTGTGAC 59.589 52.381 0.00 0.00 0.00 3.67
5188 5296 0.387929 AGTACCCTGTGTGTGTGACG 59.612 55.000 0.00 0.00 0.00 4.35
5189 5297 0.599204 GTACCCTGTGTGTGTGACGG 60.599 60.000 0.00 0.00 0.00 4.79
5190 5298 2.372040 TACCCTGTGTGTGTGACGGC 62.372 60.000 0.00 0.00 0.00 5.68
5191 5299 2.108976 CCTGTGTGTGTGACGGCT 59.891 61.111 0.00 0.00 0.00 5.52
5192 5300 1.956170 CCTGTGTGTGTGACGGCTC 60.956 63.158 0.00 0.00 0.00 4.70
5193 5301 1.227234 CTGTGTGTGTGACGGCTCA 60.227 57.895 0.00 0.00 0.00 4.26
5194 5302 1.490693 CTGTGTGTGTGACGGCTCAC 61.491 60.000 16.48 16.48 46.34 3.51
5195 5303 2.108157 TGTGTGTGACGGCTCACC 59.892 61.111 20.11 12.04 45.68 4.02
5196 5304 2.665185 GTGTGTGACGGCTCACCC 60.665 66.667 20.11 5.53 45.68 4.61
5197 5305 3.157949 TGTGTGACGGCTCACCCA 61.158 61.111 20.11 4.17 45.68 4.51
5198 5306 2.665185 GTGTGACGGCTCACCCAC 60.665 66.667 12.50 0.00 45.68 4.61
5199 5307 3.936203 TGTGACGGCTCACCCACC 61.936 66.667 12.45 0.00 45.68 4.61
5200 5308 3.936203 GTGACGGCTCACCCACCA 61.936 66.667 0.00 0.00 41.06 4.17
5201 5309 3.625897 TGACGGCTCACCCACCAG 61.626 66.667 0.00 0.00 0.00 4.00
5202 5310 4.394712 GACGGCTCACCCACCAGG 62.395 72.222 0.00 0.00 43.78 4.45
5216 5324 2.040278 CAGGGAGGACTGGGAGCT 59.960 66.667 0.00 0.00 34.84 4.09
5217 5325 2.063378 CAGGGAGGACTGGGAGCTC 61.063 68.421 4.71 4.71 34.84 4.09
5218 5326 2.766229 GGGAGGACTGGGAGCTCC 60.766 72.222 25.59 25.59 0.00 4.70
5219 5327 2.366570 GGAGGACTGGGAGCTCCT 59.633 66.667 31.36 13.11 39.81 3.69
5220 5328 3.948702 GAGGACTGGGAGCTCCTC 58.051 66.667 31.36 20.85 44.59 3.71
5221 5329 1.309688 GAGGACTGGGAGCTCCTCT 59.690 63.158 31.36 19.64 46.48 3.69
5222 5330 0.325203 GAGGACTGGGAGCTCCTCTT 60.325 60.000 31.36 17.99 46.48 2.85
5223 5331 0.118144 AGGACTGGGAGCTCCTCTTT 59.882 55.000 31.36 13.98 30.37 2.52
5224 5332 0.539518 GGACTGGGAGCTCCTCTTTC 59.460 60.000 31.36 20.74 36.20 2.62
5225 5333 1.567357 GACTGGGAGCTCCTCTTTCT 58.433 55.000 31.36 8.96 36.20 2.52
5226 5334 2.624557 GGACTGGGAGCTCCTCTTTCTA 60.625 54.545 31.36 9.09 36.20 2.10
5227 5335 2.693074 GACTGGGAGCTCCTCTTTCTAG 59.307 54.545 31.36 18.61 36.20 2.43
5228 5336 2.038659 CTGGGAGCTCCTCTTTCTAGG 58.961 57.143 31.36 8.07 38.06 3.02
5229 5337 1.362932 TGGGAGCTCCTCTTTCTAGGT 59.637 52.381 31.36 0.00 37.91 3.08
5230 5338 2.036387 GGGAGCTCCTCTTTCTAGGTC 58.964 57.143 31.36 7.09 37.91 3.85
5231 5339 2.624557 GGGAGCTCCTCTTTCTAGGTCA 60.625 54.545 31.36 0.00 39.05 4.02
5232 5340 3.304829 GGAGCTCCTCTTTCTAGGTCAT 58.695 50.000 26.25 0.00 39.05 3.06
5233 5341 3.320826 GGAGCTCCTCTTTCTAGGTCATC 59.679 52.174 26.25 0.00 39.05 2.92
5234 5342 3.957497 GAGCTCCTCTTTCTAGGTCATCA 59.043 47.826 0.87 0.00 37.62 3.07
5235 5343 3.704061 AGCTCCTCTTTCTAGGTCATCAC 59.296 47.826 0.00 0.00 37.91 3.06
5236 5344 3.449018 GCTCCTCTTTCTAGGTCATCACA 59.551 47.826 0.00 0.00 37.91 3.58
5237 5345 4.081420 GCTCCTCTTTCTAGGTCATCACAA 60.081 45.833 0.00 0.00 37.91 3.33
5238 5346 5.659463 CTCCTCTTTCTAGGTCATCACAAG 58.341 45.833 0.00 0.00 37.91 3.16
5239 5347 4.467795 TCCTCTTTCTAGGTCATCACAAGG 59.532 45.833 0.00 0.00 37.91 3.61
5240 5348 4.383552 CCTCTTTCTAGGTCATCACAAGGG 60.384 50.000 0.00 0.00 31.46 3.95
5241 5349 4.168101 TCTTTCTAGGTCATCACAAGGGT 58.832 43.478 0.00 0.00 0.00 4.34
5242 5350 4.597507 TCTTTCTAGGTCATCACAAGGGTT 59.402 41.667 0.00 0.00 0.00 4.11
5243 5351 3.981071 TCTAGGTCATCACAAGGGTTG 57.019 47.619 0.00 0.00 0.00 3.77
5244 5352 2.571653 TCTAGGTCATCACAAGGGTTGG 59.428 50.000 0.00 0.00 34.12 3.77
5245 5353 0.405585 AGGTCATCACAAGGGTTGGG 59.594 55.000 0.00 0.00 34.65 4.12
5246 5354 1.250840 GGTCATCACAAGGGTTGGGC 61.251 60.000 0.00 0.00 32.92 5.36
5247 5355 1.076549 TCATCACAAGGGTTGGGCC 59.923 57.895 0.00 0.00 32.92 5.80
5248 5356 1.077265 CATCACAAGGGTTGGGCCT 59.923 57.895 4.53 0.00 37.43 5.19
5249 5357 0.542702 CATCACAAGGGTTGGGCCTT 60.543 55.000 4.53 0.00 37.43 4.35
5250 5358 0.542702 ATCACAAGGGTTGGGCCTTG 60.543 55.000 4.53 0.85 46.02 3.61
5326 5434 2.375845 TGGGATAAAAGGGACAAACCGA 59.624 45.455 0.00 0.00 40.11 4.69
5366 5474 1.364171 CGGATCCATCTGGTCCGTC 59.636 63.158 21.82 7.93 45.33 4.79
5422 5531 4.770874 CCGGATTTGGGTCGCGGT 62.771 66.667 6.13 0.00 31.54 5.68
5491 5601 2.285442 GCCACCTACCTCCCACCT 60.285 66.667 0.00 0.00 0.00 4.00
5602 5717 3.359523 TCGTCGTCCACACTCCCG 61.360 66.667 0.00 0.00 0.00 5.14
5719 5840 2.032681 GCAAGGGGAAGCACGACT 59.967 61.111 0.00 0.00 0.00 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.188460 CCATCACGGTTTAAGTTCTGGTG 59.812 47.826 0.00 0.00 0.00 4.17
2 3 3.408634 CCATCACGGTTTAAGTTCTGGT 58.591 45.455 0.00 0.00 0.00 4.00
3 4 2.747446 CCCATCACGGTTTAAGTTCTGG 59.253 50.000 0.00 0.00 0.00 3.86
5 6 2.039879 AGCCCATCACGGTTTAAGTTCT 59.960 45.455 0.00 0.00 0.00 3.01
6 7 2.161609 CAGCCCATCACGGTTTAAGTTC 59.838 50.000 0.00 0.00 0.00 3.01
7 8 2.159382 CAGCCCATCACGGTTTAAGTT 58.841 47.619 0.00 0.00 0.00 2.66
8 9 1.349688 TCAGCCCATCACGGTTTAAGT 59.650 47.619 0.00 0.00 0.00 2.24
9 10 2.009774 CTCAGCCCATCACGGTTTAAG 58.990 52.381 0.00 0.00 0.00 1.85
10 11 1.339631 CCTCAGCCCATCACGGTTTAA 60.340 52.381 0.00 0.00 0.00 1.52
11 12 0.251916 CCTCAGCCCATCACGGTTTA 59.748 55.000 0.00 0.00 0.00 2.01
12 13 1.002134 CCTCAGCCCATCACGGTTT 60.002 57.895 0.00 0.00 0.00 3.27
13 14 1.274703 ATCCTCAGCCCATCACGGTT 61.275 55.000 0.00 0.00 0.00 4.44
14 15 0.398522 TATCCTCAGCCCATCACGGT 60.399 55.000 0.00 0.00 0.00 4.83
15 16 0.034059 GTATCCTCAGCCCATCACGG 59.966 60.000 0.00 0.00 0.00 4.94
16 17 0.034059 GGTATCCTCAGCCCATCACG 59.966 60.000 0.00 0.00 0.00 4.35
17 18 1.131638 TGGTATCCTCAGCCCATCAC 58.868 55.000 0.00 0.00 0.00 3.06
18 19 1.131638 GTGGTATCCTCAGCCCATCA 58.868 55.000 0.00 0.00 0.00 3.07
19 20 1.131638 TGTGGTATCCTCAGCCCATC 58.868 55.000 0.00 0.00 0.00 3.51
20 21 1.595311 TTGTGGTATCCTCAGCCCAT 58.405 50.000 0.00 0.00 0.00 4.00
21 22 1.595311 ATTGTGGTATCCTCAGCCCA 58.405 50.000 0.00 0.00 0.00 5.36
22 23 2.576615 GAATTGTGGTATCCTCAGCCC 58.423 52.381 0.00 0.00 0.00 5.19
23 24 2.173569 AGGAATTGTGGTATCCTCAGCC 59.826 50.000 0.00 0.00 39.36 4.85
24 25 3.567478 AGGAATTGTGGTATCCTCAGC 57.433 47.619 0.00 0.00 39.36 4.26
28 29 5.036916 TGGTTAGAGGAATTGTGGTATCCT 58.963 41.667 0.00 0.00 46.14 3.24
29 30 5.367945 TGGTTAGAGGAATTGTGGTATCC 57.632 43.478 0.00 0.00 0.00 2.59
30 31 5.998363 GGATGGTTAGAGGAATTGTGGTATC 59.002 44.000 0.00 0.00 0.00 2.24
31 32 5.431731 TGGATGGTTAGAGGAATTGTGGTAT 59.568 40.000 0.00 0.00 0.00 2.73
32 33 4.785914 TGGATGGTTAGAGGAATTGTGGTA 59.214 41.667 0.00 0.00 0.00 3.25
33 34 3.591527 TGGATGGTTAGAGGAATTGTGGT 59.408 43.478 0.00 0.00 0.00 4.16
34 35 4.235079 TGGATGGTTAGAGGAATTGTGG 57.765 45.455 0.00 0.00 0.00 4.17
35 36 4.399303 GGTTGGATGGTTAGAGGAATTGTG 59.601 45.833 0.00 0.00 0.00 3.33
36 37 4.044065 TGGTTGGATGGTTAGAGGAATTGT 59.956 41.667 0.00 0.00 0.00 2.71
37 38 4.399303 GTGGTTGGATGGTTAGAGGAATTG 59.601 45.833 0.00 0.00 0.00 2.32
38 39 4.044065 TGTGGTTGGATGGTTAGAGGAATT 59.956 41.667 0.00 0.00 0.00 2.17
39 40 3.591527 TGTGGTTGGATGGTTAGAGGAAT 59.408 43.478 0.00 0.00 0.00 3.01
40 41 2.983192 TGTGGTTGGATGGTTAGAGGAA 59.017 45.455 0.00 0.00 0.00 3.36
41 42 2.571653 CTGTGGTTGGATGGTTAGAGGA 59.428 50.000 0.00 0.00 0.00 3.71
42 43 2.356125 CCTGTGGTTGGATGGTTAGAGG 60.356 54.545 0.00 0.00 0.00 3.69
43 44 2.305927 ACCTGTGGTTGGATGGTTAGAG 59.694 50.000 0.00 0.00 27.29 2.43
44 45 2.344592 ACCTGTGGTTGGATGGTTAGA 58.655 47.619 0.00 0.00 27.29 2.10
45 46 2.879103 ACCTGTGGTTGGATGGTTAG 57.121 50.000 0.00 0.00 27.29 2.34
58 59 1.148310 CACTAGCGAACCAACCTGTG 58.852 55.000 0.00 0.00 0.00 3.66
59 60 0.756903 ACACTAGCGAACCAACCTGT 59.243 50.000 0.00 0.00 0.00 4.00
60 61 1.000955 AGACACTAGCGAACCAACCTG 59.999 52.381 0.00 0.00 0.00 4.00
61 62 1.339097 AGACACTAGCGAACCAACCT 58.661 50.000 0.00 0.00 0.00 3.50
62 63 2.230750 AGTAGACACTAGCGAACCAACC 59.769 50.000 0.00 0.00 31.45 3.77
63 64 3.500014 GAGTAGACACTAGCGAACCAAC 58.500 50.000 0.00 0.00 34.21 3.77
64 65 2.490903 GGAGTAGACACTAGCGAACCAA 59.509 50.000 0.00 0.00 34.21 3.67
65 66 2.089980 GGAGTAGACACTAGCGAACCA 58.910 52.381 0.00 0.00 34.21 3.67
66 67 1.404748 GGGAGTAGACACTAGCGAACC 59.595 57.143 0.00 0.00 34.21 3.62
67 68 2.355444 GAGGGAGTAGACACTAGCGAAC 59.645 54.545 0.00 0.00 34.21 3.95
68 69 2.641305 GAGGGAGTAGACACTAGCGAA 58.359 52.381 0.00 0.00 34.21 4.70
69 70 1.134159 GGAGGGAGTAGACACTAGCGA 60.134 57.143 0.00 0.00 34.21 4.93
70 71 1.310904 GGAGGGAGTAGACACTAGCG 58.689 60.000 0.00 0.00 34.21 4.26
71 72 1.310904 CGGAGGGAGTAGACACTAGC 58.689 60.000 0.00 0.00 34.21 3.42
72 73 2.713863 ACGGAGGGAGTAGACACTAG 57.286 55.000 0.00 0.00 34.21 2.57
73 74 2.356535 GGAACGGAGGGAGTAGACACTA 60.357 54.545 0.00 0.00 34.21 2.74
74 75 1.616456 GGAACGGAGGGAGTAGACACT 60.616 57.143 0.00 0.00 37.87 3.55
75 76 0.816373 GGAACGGAGGGAGTAGACAC 59.184 60.000 0.00 0.00 0.00 3.67
76 77 0.406750 TGGAACGGAGGGAGTAGACA 59.593 55.000 0.00 0.00 0.00 3.41
77 78 1.553706 TTGGAACGGAGGGAGTAGAC 58.446 55.000 0.00 0.00 0.00 2.59
78 79 2.314071 TTTGGAACGGAGGGAGTAGA 57.686 50.000 0.00 0.00 0.00 2.59
79 80 3.629142 AATTTGGAACGGAGGGAGTAG 57.371 47.619 0.00 0.00 0.00 2.57
80 81 4.098894 AGTAATTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
81 82 2.910977 AGTAATTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
82 83 3.629142 AGTAATTTGGAACGGAGGGAG 57.371 47.619 0.00 0.00 0.00 4.30
83 84 3.328343 TCAAGTAATTTGGAACGGAGGGA 59.672 43.478 0.00 0.00 37.39 4.20
84 85 3.439129 GTCAAGTAATTTGGAACGGAGGG 59.561 47.826 0.00 0.00 37.39 4.30
85 86 3.439129 GGTCAAGTAATTTGGAACGGAGG 59.561 47.826 0.00 0.00 37.39 4.30
86 87 3.439129 GGGTCAAGTAATTTGGAACGGAG 59.561 47.826 0.00 0.00 37.39 4.63
87 88 3.181442 TGGGTCAAGTAATTTGGAACGGA 60.181 43.478 0.00 0.00 37.39 4.69
88 89 3.150767 TGGGTCAAGTAATTTGGAACGG 58.849 45.455 0.00 0.00 37.39 4.44
89 90 6.693315 ATATGGGTCAAGTAATTTGGAACG 57.307 37.500 0.00 0.00 37.39 3.95
99 100 8.867097 GGTGTCTAGATAAATATGGGTCAAGTA 58.133 37.037 0.00 0.00 0.00 2.24
100 101 7.471539 CGGTGTCTAGATAAATATGGGTCAAGT 60.472 40.741 0.00 0.00 0.00 3.16
101 102 6.868864 CGGTGTCTAGATAAATATGGGTCAAG 59.131 42.308 0.00 0.00 0.00 3.02
102 103 6.551975 TCGGTGTCTAGATAAATATGGGTCAA 59.448 38.462 0.00 0.00 0.00 3.18
103 104 6.072649 TCGGTGTCTAGATAAATATGGGTCA 58.927 40.000 0.00 0.00 0.00 4.02
104 105 6.585695 TCGGTGTCTAGATAAATATGGGTC 57.414 41.667 0.00 0.00 0.00 4.46
105 106 6.497259 ACATCGGTGTCTAGATAAATATGGGT 59.503 38.462 0.00 0.00 31.41 4.51
106 107 6.936279 ACATCGGTGTCTAGATAAATATGGG 58.064 40.000 0.00 0.00 31.41 4.00
107 108 9.737427 GATACATCGGTGTCTAGATAAATATGG 57.263 37.037 3.56 0.00 39.77 2.74
118 119 5.926663 AGTGTCTAGATACATCGGTGTCTA 58.073 41.667 20.24 0.14 42.83 2.59
119 120 4.783055 AGTGTCTAGATACATCGGTGTCT 58.217 43.478 20.24 0.00 45.91 3.41
120 121 6.615264 TTAGTGTCTAGATACATCGGTGTC 57.385 41.667 20.24 0.00 39.77 3.67
121 122 6.376299 TGTTTAGTGTCTAGATACATCGGTGT 59.624 38.462 20.24 6.54 42.39 4.16
122 123 6.792326 TGTTTAGTGTCTAGATACATCGGTG 58.208 40.000 20.24 0.00 0.00 4.94
123 124 7.122353 ACTTGTTTAGTGTCTAGATACATCGGT 59.878 37.037 20.24 3.37 35.19 4.69
124 125 7.481642 ACTTGTTTAGTGTCTAGATACATCGG 58.518 38.462 20.24 7.20 35.19 4.18
136 137 9.395707 CGGATGTATCTATACTTGTTTAGTGTC 57.604 37.037 2.07 0.00 37.73 3.67
137 138 8.910944 ACGGATGTATCTATACTTGTTTAGTGT 58.089 33.333 2.07 0.00 37.73 3.55
172 173 9.471084 CCGTTCCAAATTAGTTGACTTAAATTT 57.529 29.630 0.00 0.00 39.87 1.82
173 174 8.852135 TCCGTTCCAAATTAGTTGACTTAAATT 58.148 29.630 0.00 0.00 39.87 1.82
174 175 8.398878 TCCGTTCCAAATTAGTTGACTTAAAT 57.601 30.769 0.00 0.00 39.87 1.40
175 176 7.040961 CCTCCGTTCCAAATTAGTTGACTTAAA 60.041 37.037 0.00 0.00 39.87 1.52
176 177 6.428771 CCTCCGTTCCAAATTAGTTGACTTAA 59.571 38.462 0.00 0.00 39.87 1.85
177 178 5.935789 CCTCCGTTCCAAATTAGTTGACTTA 59.064 40.000 0.00 0.00 39.87 2.24
178 179 4.760204 CCTCCGTTCCAAATTAGTTGACTT 59.240 41.667 0.00 0.00 39.87 3.01
179 180 4.324267 CCTCCGTTCCAAATTAGTTGACT 58.676 43.478 0.00 0.00 39.87 3.41
180 181 3.439129 CCCTCCGTTCCAAATTAGTTGAC 59.561 47.826 0.00 0.00 39.87 3.18
181 182 3.328343 TCCCTCCGTTCCAAATTAGTTGA 59.672 43.478 0.00 0.00 39.87 3.18
182 183 3.681593 TCCCTCCGTTCCAAATTAGTTG 58.318 45.455 0.00 0.00 36.94 3.16
183 184 3.329814 ACTCCCTCCGTTCCAAATTAGTT 59.670 43.478 0.00 0.00 0.00 2.24
184 185 2.910977 ACTCCCTCCGTTCCAAATTAGT 59.089 45.455 0.00 0.00 0.00 2.24
185 186 3.629142 ACTCCCTCCGTTCCAAATTAG 57.371 47.619 0.00 0.00 0.00 1.73
186 187 3.118519 GCTACTCCCTCCGTTCCAAATTA 60.119 47.826 0.00 0.00 0.00 1.40
187 188 2.355818 GCTACTCCCTCCGTTCCAAATT 60.356 50.000 0.00 0.00 0.00 1.82
188 189 1.209747 GCTACTCCCTCCGTTCCAAAT 59.790 52.381 0.00 0.00 0.00 2.32
189 190 0.611714 GCTACTCCCTCCGTTCCAAA 59.388 55.000 0.00 0.00 0.00 3.28
190 191 0.252103 AGCTACTCCCTCCGTTCCAA 60.252 55.000 0.00 0.00 0.00 3.53
191 192 0.252103 AAGCTACTCCCTCCGTTCCA 60.252 55.000 0.00 0.00 0.00 3.53
192 193 0.903236 AAAGCTACTCCCTCCGTTCC 59.097 55.000 0.00 0.00 0.00 3.62
193 194 3.783191 CTTAAAGCTACTCCCTCCGTTC 58.217 50.000 0.00 0.00 0.00 3.95
194 195 2.093606 GCTTAAAGCTACTCCCTCCGTT 60.094 50.000 0.00 0.00 38.45 4.44
195 196 1.481363 GCTTAAAGCTACTCCCTCCGT 59.519 52.381 0.00 0.00 38.45 4.69
196 197 1.480954 TGCTTAAAGCTACTCCCTCCG 59.519 52.381 0.00 0.00 42.97 4.63
197 198 3.271729 GTTGCTTAAAGCTACTCCCTCC 58.728 50.000 0.00 0.00 42.32 4.30
198 199 3.271729 GGTTGCTTAAAGCTACTCCCTC 58.728 50.000 0.00 0.00 44.42 4.30
199 200 2.642807 TGGTTGCTTAAAGCTACTCCCT 59.357 45.455 0.00 0.00 44.42 4.20
200 201 3.067684 TGGTTGCTTAAAGCTACTCCC 57.932 47.619 0.00 0.00 44.42 4.30
201 202 5.644977 ATTTGGTTGCTTAAAGCTACTCC 57.355 39.130 0.00 0.00 44.42 3.85
202 203 6.258899 GCTATTTGGTTGCTTAAAGCTACTC 58.741 40.000 0.00 0.00 44.42 2.59
203 204 5.125578 GGCTATTTGGTTGCTTAAAGCTACT 59.874 40.000 0.00 0.00 44.42 2.57
204 205 5.105917 TGGCTATTTGGTTGCTTAAAGCTAC 60.106 40.000 0.00 0.00 44.30 3.58
205 206 5.013547 TGGCTATTTGGTTGCTTAAAGCTA 58.986 37.500 0.00 0.00 42.97 3.32
206 207 3.831911 TGGCTATTTGGTTGCTTAAAGCT 59.168 39.130 0.00 0.00 42.97 3.74
207 208 4.082245 TCTGGCTATTTGGTTGCTTAAAGC 60.082 41.667 0.00 0.00 42.82 3.51
208 209 5.643379 TCTGGCTATTTGGTTGCTTAAAG 57.357 39.130 0.00 0.00 0.00 1.85
209 210 6.350949 GGATTCTGGCTATTTGGTTGCTTAAA 60.351 38.462 0.00 0.00 0.00 1.52
210 211 5.127031 GGATTCTGGCTATTTGGTTGCTTAA 59.873 40.000 0.00 0.00 0.00 1.85
211 212 4.644685 GGATTCTGGCTATTTGGTTGCTTA 59.355 41.667 0.00 0.00 0.00 3.09
212 213 3.448660 GGATTCTGGCTATTTGGTTGCTT 59.551 43.478 0.00 0.00 0.00 3.91
213 214 3.026694 GGATTCTGGCTATTTGGTTGCT 58.973 45.455 0.00 0.00 0.00 3.91
214 215 2.223572 CGGATTCTGGCTATTTGGTTGC 60.224 50.000 0.00 0.00 0.00 4.17
215 216 3.278574 TCGGATTCTGGCTATTTGGTTG 58.721 45.455 0.00 0.00 0.00 3.77
228 229 8.598041 ACTGAAATATAGGCTAAATCGGATTCT 58.402 33.333 3.28 0.00 0.00 2.40
261 265 2.294979 AGACCGAAACCAAACCAAGTC 58.705 47.619 0.00 0.00 0.00 3.01
263 267 2.286772 CGAAGACCGAAACCAAACCAAG 60.287 50.000 0.00 0.00 41.76 3.61
280 284 1.001378 CTGGGCACTTTCAAACCGAAG 60.001 52.381 0.00 0.00 34.32 3.79
300 304 1.634960 GTCTCCCATCTACCTAGGGC 58.365 60.000 14.81 0.00 42.52 5.19
304 308 1.144503 GACCCGTCTCCCATCTACCTA 59.855 57.143 0.00 0.00 0.00 3.08
305 309 0.106116 GACCCGTCTCCCATCTACCT 60.106 60.000 0.00 0.00 0.00 3.08
306 310 0.106116 AGACCCGTCTCCCATCTACC 60.106 60.000 0.00 0.00 34.17 3.18
307 311 3.516911 AGACCCGTCTCCCATCTAC 57.483 57.895 0.00 0.00 34.17 2.59
333 337 1.937899 CCGACAAAAGAAACACCTCGT 59.062 47.619 0.00 0.00 0.00 4.18
334 338 1.263217 CCCGACAAAAGAAACACCTCG 59.737 52.381 0.00 0.00 0.00 4.63
335 339 1.607148 CCCCGACAAAAGAAACACCTC 59.393 52.381 0.00 0.00 0.00 3.85
339 343 4.463186 TCTTTTTCCCCGACAAAAGAAACA 59.537 37.500 4.91 0.00 43.06 2.83
341 345 4.707934 ACTCTTTTTCCCCGACAAAAGAAA 59.292 37.500 8.11 0.00 44.52 2.52
343 347 3.630312 CACTCTTTTTCCCCGACAAAAGA 59.370 43.478 6.84 6.84 43.54 2.52
344 348 3.630312 TCACTCTTTTTCCCCGACAAAAG 59.370 43.478 0.00 0.00 40.12 2.27
469 478 3.788766 GCGCCTTGTGCCACTACG 61.789 66.667 0.00 0.00 36.24 3.51
501 510 3.365265 CGGTCTGGGCCAAAGCAC 61.365 66.667 8.04 1.62 45.43 4.40
546 555 2.190578 GCCCGTGATGCTTAGGCT 59.809 61.111 0.00 0.00 40.57 4.58
550 559 2.124736 GGCTGCCCGTGATGCTTA 60.125 61.111 7.66 0.00 0.00 3.09
588 597 3.072476 TCCTTTGTCTTTCATTCGAGGGT 59.928 43.478 0.00 0.00 0.00 4.34
592 601 4.703897 ACACTCCTTTGTCTTTCATTCGA 58.296 39.130 0.00 0.00 0.00 3.71
701 710 0.323360 TCGGGGGATGCCTCTTTTTG 60.323 55.000 0.00 0.00 0.00 2.44
802 811 1.352352 CAATCAAGAGTCACCCTGGGT 59.648 52.381 14.05 14.05 35.62 4.51
847 856 4.310769 CGGACTATCTTGCTATTCTTGGG 58.689 47.826 0.00 0.00 0.00 4.12
853 862 3.467803 GCAACCGGACTATCTTGCTATT 58.532 45.455 9.46 0.00 36.81 1.73
887 896 1.602377 GCTGCCGGGTTAATCATACAC 59.398 52.381 2.18 0.00 0.00 2.90
913 922 4.638421 TGAACTAAATTCCCCAACTATGCG 59.362 41.667 0.00 0.00 36.36 4.73
935 950 4.691860 ACAGCCAAAGATCTCGAAATTG 57.308 40.909 0.00 0.00 0.00 2.32
1146 1162 3.920093 GAAACTGCACCCCTCCCCG 62.920 68.421 0.00 0.00 0.00 5.73
1148 1164 2.359975 CGAAACTGCACCCCTCCC 60.360 66.667 0.00 0.00 0.00 4.30
1164 1180 2.962827 CTTGTCAGCAGCAGCACCG 61.963 63.158 3.17 0.00 45.49 4.94
1178 1194 0.617249 CCTCCTCCTCCTGCTCTTGT 60.617 60.000 0.00 0.00 0.00 3.16
1179 1195 0.325110 TCCTCCTCCTCCTGCTCTTG 60.325 60.000 0.00 0.00 0.00 3.02
1180 1196 0.032217 CTCCTCCTCCTCCTGCTCTT 60.032 60.000 0.00 0.00 0.00 2.85
1182 1198 1.457455 CCTCCTCCTCCTCCTGCTC 60.457 68.421 0.00 0.00 0.00 4.26
1183 1199 1.938596 TCCTCCTCCTCCTCCTGCT 60.939 63.158 0.00 0.00 0.00 4.24
1184 1200 1.457455 CTCCTCCTCCTCCTCCTGC 60.457 68.421 0.00 0.00 0.00 4.85
1187 1203 0.996762 TCTCCTCCTCCTCCTCCTCC 60.997 65.000 0.00 0.00 0.00 4.30
1215 1231 0.690077 ACTCCTCGGGGTTATCCACC 60.690 60.000 0.00 0.00 46.46 4.61
1253 1269 8.125978 TCTCCAAACAGCATTTCTTTCATTAT 57.874 30.769 0.00 0.00 0.00 1.28
1255 1271 6.409524 TCTCCAAACAGCATTTCTTTCATT 57.590 33.333 0.00 0.00 0.00 2.57
1263 1282 3.152341 CTGTCCTCTCCAAACAGCATTT 58.848 45.455 0.00 0.00 34.55 2.32
1265 1284 1.980765 TCTGTCCTCTCCAAACAGCAT 59.019 47.619 0.00 0.00 40.15 3.79
1273 1292 2.121538 CGCCGATCTGTCCTCTCCA 61.122 63.158 0.00 0.00 0.00 3.86
1378 1397 0.182061 TGGTAGTCCCTATCGTCGCT 59.818 55.000 0.00 0.00 0.00 4.93
1419 1438 3.712881 GTCGACTTGGTGTGCGGC 61.713 66.667 8.70 0.00 0.00 6.53
1425 1444 1.787155 CGAACAAGAGTCGACTTGGTG 59.213 52.381 21.08 18.90 46.02 4.17
1493 1512 9.512435 CTTAGACATGAAGAAATTAATTGCTGG 57.488 33.333 9.56 3.24 0.00 4.85
1534 1553 8.750515 AAACAAAATGTCAAATGATTCCCTTT 57.249 26.923 0.00 0.00 0.00 3.11
1535 1554 8.212995 AGAAACAAAATGTCAAATGATTCCCTT 58.787 29.630 0.00 0.00 0.00 3.95
1537 1556 7.967890 AGAAACAAAATGTCAAATGATTCCC 57.032 32.000 0.00 0.00 0.00 3.97
1538 1557 9.143631 CCTAGAAACAAAATGTCAAATGATTCC 57.856 33.333 0.00 0.00 0.00 3.01
1555 1580 7.773224 TCTTGAACAAGATGAAACCTAGAAACA 59.227 33.333 12.40 0.00 42.06 2.83
1570 1595 6.777091 TCCCTTCATCAAATTCTTGAACAAGA 59.223 34.615 12.40 12.40 44.64 3.02
1612 1637 3.194861 TCTATTATGTGTTGCCAGACGC 58.805 45.455 0.00 0.00 38.31 5.19
1759 1784 5.734855 ATCAATGTATAACACTGAACCGC 57.265 39.130 0.00 0.00 37.90 5.68
1785 1810 2.613026 TCGGTCGCATATGAACCAAT 57.387 45.000 21.10 0.00 0.00 3.16
1801 1828 4.081476 TGAGGTTATATGAGCATGGATCGG 60.081 45.833 0.00 0.00 0.00 4.18
1879 1916 6.944234 AGGTTCTTCAAAAGACTAACCAAG 57.056 37.500 10.23 0.00 36.10 3.61
2004 2041 3.620488 TCAAAGGGCTATTTACCTGCAG 58.380 45.455 6.78 6.78 37.13 4.41
2242 2282 0.413037 ATGTTTTGGGGCATCAGGGA 59.587 50.000 0.00 0.00 0.00 4.20
2373 2413 7.284074 ACTCGAGTAGATTTATCAAGAGAGGA 58.716 38.462 18.46 0.00 0.00 3.71
2385 2456 5.617252 TGGTCCAAAAACTCGAGTAGATTT 58.383 37.500 20.39 16.77 32.00 2.17
2386 2457 5.223449 TGGTCCAAAAACTCGAGTAGATT 57.777 39.130 20.39 11.66 0.00 2.40
2391 2462 5.592104 AAATTTGGTCCAAAAACTCGAGT 57.408 34.783 20.76 13.58 36.90 4.18
2392 2463 6.312672 ACAAAAATTTGGTCCAAAAACTCGAG 59.687 34.615 20.76 11.84 42.34 4.04
2395 2466 9.469807 AAAAACAAAAATTTGGTCCAAAAACTC 57.530 25.926 20.76 0.00 42.34 3.01
2415 2486 8.087750 CCAGTTTAGGATCTGCAAATAAAAACA 58.912 33.333 10.79 0.00 0.00 2.83
2416 2487 7.063426 GCCAGTTTAGGATCTGCAAATAAAAAC 59.937 37.037 0.00 0.00 0.00 2.43
2477 2548 5.249852 AGTTAGAATTACACAACCAGGCCTA 59.750 40.000 3.98 0.00 0.00 3.93
2533 2604 2.111041 ATAACGCGACGCTACCTTAC 57.889 50.000 15.93 0.00 0.00 2.34
2544 2615 9.734620 AAACACTAGTATTTGTATATAACGCGA 57.265 29.630 15.93 0.00 0.00 5.87
2566 2637 9.507329 AGAGAAGAGATAAGCATGTTTAAAACA 57.493 29.630 6.08 0.00 46.94 2.83
2642 2713 4.920927 GCTTCTCTATCCAAGATTCGTAGC 59.079 45.833 0.00 0.00 32.41 3.58
2650 2721 6.784473 TGAGGATTATGCTTCTCTATCCAAGA 59.216 38.462 0.00 0.00 37.76 3.02
2702 2773 9.534565 TGGATCGACATTAATCTTTAGAGAAAG 57.465 33.333 0.00 0.00 43.05 2.62
2714 2785 4.384056 CAAGGAGCTGGATCGACATTAAT 58.616 43.478 0.00 0.00 0.00 1.40
2764 2835 1.630369 CCTGTCTCCCAGAAACCATGA 59.370 52.381 0.00 0.00 44.49 3.07
2839 2910 5.190528 AGGATGTAAAGAGAGAAATGAGGCA 59.809 40.000 0.00 0.00 0.00 4.75
2844 2915 8.558973 AGAACAAGGATGTAAAGAGAGAAATG 57.441 34.615 0.00 0.00 39.40 2.32
2876 2952 9.217223 CTGTTGGTTGCGTATGTATATAAAAAC 57.783 33.333 0.00 0.00 0.00 2.43
2888 2964 1.165270 GGAAGCTGTTGGTTGCGTAT 58.835 50.000 0.00 0.00 32.82 3.06
2890 2966 1.152963 AGGAAGCTGTTGGTTGCGT 60.153 52.632 0.00 0.00 44.76 5.24
2891 2967 1.283793 CAGGAAGCTGTTGGTTGCG 59.716 57.895 0.00 0.00 44.76 4.85
2901 2977 2.143876 AACCACAAACACAGGAAGCT 57.856 45.000 0.00 0.00 0.00 3.74
3039 3115 3.777106 ATGTTGAAGCCTCTCACTGAA 57.223 42.857 0.00 0.00 0.00 3.02
3081 3157 0.108615 GCAGACTGATGCGTGGTACT 60.109 55.000 6.65 0.00 36.28 2.73
3158 3234 6.936900 CCCACCAAATATACAGAGTAATCTGG 59.063 42.308 23.00 7.15 41.76 3.86
3179 3255 6.377146 TGCTTCTTGGACTAAATATTTCCCAC 59.623 38.462 3.39 0.77 0.00 4.61
3221 3297 4.314121 GCCTTGCTGAATCCTAGTATCAG 58.686 47.826 10.67 10.67 42.70 2.90
3771 3863 1.734655 AGCTCTCTCCCAGGACAAAA 58.265 50.000 0.00 0.00 0.00 2.44
3928 4020 4.736473 TGGAGAGGTGTAATATCCGATGA 58.264 43.478 0.00 0.00 32.47 2.92
4073 4167 6.158175 TGTTGTTATTGTTGTTGTTGTTGC 57.842 33.333 0.00 0.00 0.00 4.17
4089 4183 7.030165 CACACACACTTGGTATTTTGTTGTTA 58.970 34.615 0.00 0.00 0.00 2.41
4092 4186 4.267452 GCACACACACTTGGTATTTTGTTG 59.733 41.667 0.00 0.00 0.00 3.33
4093 4187 4.081972 TGCACACACACTTGGTATTTTGTT 60.082 37.500 0.00 0.00 0.00 2.83
4094 4188 3.445450 TGCACACACACTTGGTATTTTGT 59.555 39.130 0.00 0.00 0.00 2.83
4095 4189 4.039151 TGCACACACACTTGGTATTTTG 57.961 40.909 0.00 0.00 0.00 2.44
4096 4190 4.727507 TTGCACACACACTTGGTATTTT 57.272 36.364 0.00 0.00 0.00 1.82
4097 4191 4.727507 TTTGCACACACACTTGGTATTT 57.272 36.364 0.00 0.00 0.00 1.40
4098 4192 4.340666 TGATTTGCACACACACTTGGTATT 59.659 37.500 0.00 0.00 0.00 1.89
4099 4193 3.888323 TGATTTGCACACACACTTGGTAT 59.112 39.130 0.00 0.00 0.00 2.73
4100 4194 3.282885 TGATTTGCACACACACTTGGTA 58.717 40.909 0.00 0.00 0.00 3.25
4101 4195 2.098614 TGATTTGCACACACACTTGGT 58.901 42.857 0.00 0.00 0.00 3.67
4102 4196 2.358582 TCTGATTTGCACACACACTTGG 59.641 45.455 0.00 0.00 0.00 3.61
4103 4197 3.696281 TCTGATTTGCACACACACTTG 57.304 42.857 0.00 0.00 0.00 3.16
4104 4198 3.181487 GGTTCTGATTTGCACACACACTT 60.181 43.478 0.00 0.00 0.00 3.16
4177 4271 5.193679 AGCCACTCATTAACCATAGTTTCC 58.806 41.667 0.00 0.00 37.42 3.13
4222 4316 2.301009 GGACGGAGGGAGTAAAAGACAA 59.699 50.000 0.00 0.00 0.00 3.18
4230 4324 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
4231 4325 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
4232 4326 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
4233 4327 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
4234 4328 2.026636 TCACTTATTTTGGGACGGAGGG 60.027 50.000 0.00 0.00 0.00 4.30
4235 4329 3.007635 GTCACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
4236 4330 3.933332 GAGTCACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 33.84 4.63
4237 4331 3.325425 TGAGTCACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 33.84 4.69
4238 4332 3.670625 TGAGTCACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 33.84 4.79
4239 4333 4.755123 ACTTGAGTCACTTATTTTGGGACG 59.245 41.667 0.00 0.00 33.84 4.79
4240 4334 6.635030 AACTTGAGTCACTTATTTTGGGAC 57.365 37.500 0.00 0.00 0.00 4.46
4241 4335 6.605594 ACAAACTTGAGTCACTTATTTTGGGA 59.394 34.615 9.57 0.00 0.00 4.37
4242 4336 6.805713 ACAAACTTGAGTCACTTATTTTGGG 58.194 36.000 9.57 0.00 0.00 4.12
4243 4337 8.621286 AGTACAAACTTGAGTCACTTATTTTGG 58.379 33.333 9.57 0.00 29.00 3.28
4249 4343 9.880157 AAAGTTAGTACAAACTTGAGTCACTTA 57.120 29.630 2.97 0.00 46.40 2.24
4250 4344 8.665685 CAAAGTTAGTACAAACTTGAGTCACTT 58.334 33.333 2.97 0.00 46.40 3.16
4251 4345 7.822822 ACAAAGTTAGTACAAACTTGAGTCACT 59.177 33.333 2.97 0.00 46.40 3.41
4252 4346 7.971455 ACAAAGTTAGTACAAACTTGAGTCAC 58.029 34.615 2.97 0.00 46.40 3.67
4253 4347 9.090692 GTACAAAGTTAGTACAAACTTGAGTCA 57.909 33.333 2.97 0.00 46.40 3.41
4254 4348 9.310716 AGTACAAAGTTAGTACAAACTTGAGTC 57.689 33.333 2.97 0.00 46.40 3.36
4278 4372 9.310716 GTGACTCAACTTTGTACTAACTTTAGT 57.689 33.333 6.85 6.85 45.39 2.24
4279 4373 9.530633 AGTGACTCAACTTTGTACTAACTTTAG 57.469 33.333 0.00 0.00 36.82 1.85
4280 4374 9.880157 AAGTGACTCAACTTTGTACTAACTTTA 57.120 29.630 0.00 0.00 37.05 1.85
4281 4375 8.788325 AAGTGACTCAACTTTGTACTAACTTT 57.212 30.769 0.00 0.00 37.05 2.66
4287 4381 8.621286 CCAAAATAAGTGACTCAACTTTGTACT 58.379 33.333 0.00 0.00 40.77 2.73
4288 4382 8.617809 TCCAAAATAAGTGACTCAACTTTGTAC 58.382 33.333 0.00 0.00 40.77 2.90
4289 4383 8.740123 TCCAAAATAAGTGACTCAACTTTGTA 57.260 30.769 0.00 0.00 40.77 2.41
4290 4384 7.639113 TCCAAAATAAGTGACTCAACTTTGT 57.361 32.000 0.00 0.00 40.77 2.83
4291 4385 7.165812 CGTTCCAAAATAAGTGACTCAACTTTG 59.834 37.037 0.00 0.00 40.77 2.77
4292 4386 7.193595 CGTTCCAAAATAAGTGACTCAACTTT 58.806 34.615 0.00 0.00 40.77 2.66
4293 4387 6.238648 CCGTTCCAAAATAAGTGACTCAACTT 60.239 38.462 0.00 0.00 42.89 2.66
4294 4388 5.238650 CCGTTCCAAAATAAGTGACTCAACT 59.761 40.000 0.00 0.00 0.00 3.16
4295 4389 5.237779 TCCGTTCCAAAATAAGTGACTCAAC 59.762 40.000 0.00 0.00 0.00 3.18
4296 4390 5.369833 TCCGTTCCAAAATAAGTGACTCAA 58.630 37.500 0.00 0.00 0.00 3.02
4297 4391 4.963373 TCCGTTCCAAAATAAGTGACTCA 58.037 39.130 0.00 0.00 0.00 3.41
4298 4392 4.392138 CCTCCGTTCCAAAATAAGTGACTC 59.608 45.833 0.00 0.00 0.00 3.36
4299 4393 4.324267 CCTCCGTTCCAAAATAAGTGACT 58.676 43.478 0.00 0.00 0.00 3.41
4300 4394 3.439129 CCCTCCGTTCCAAAATAAGTGAC 59.561 47.826 0.00 0.00 0.00 3.67
4301 4395 3.328343 TCCCTCCGTTCCAAAATAAGTGA 59.672 43.478 0.00 0.00 0.00 3.41
4302 4396 3.681593 TCCCTCCGTTCCAAAATAAGTG 58.318 45.455 0.00 0.00 0.00 3.16
4303 4397 3.329814 ACTCCCTCCGTTCCAAAATAAGT 59.670 43.478 0.00 0.00 0.00 2.24
4304 4398 3.951663 ACTCCCTCCGTTCCAAAATAAG 58.048 45.455 0.00 0.00 0.00 1.73
4305 4399 5.703730 ATACTCCCTCCGTTCCAAAATAA 57.296 39.130 0.00 0.00 0.00 1.40
4306 4400 5.703730 AATACTCCCTCCGTTCCAAAATA 57.296 39.130 0.00 0.00 0.00 1.40
4307 4401 4.586306 AATACTCCCTCCGTTCCAAAAT 57.414 40.909 0.00 0.00 0.00 1.82
4308 4402 4.376225 AAATACTCCCTCCGTTCCAAAA 57.624 40.909 0.00 0.00 0.00 2.44
4309 4403 4.042435 AGAAAATACTCCCTCCGTTCCAAA 59.958 41.667 0.00 0.00 0.00 3.28
4310 4404 3.585732 AGAAAATACTCCCTCCGTTCCAA 59.414 43.478 0.00 0.00 0.00 3.53
4311 4405 3.178865 AGAAAATACTCCCTCCGTTCCA 58.821 45.455 0.00 0.00 0.00 3.53
4312 4406 3.908643 AGAAAATACTCCCTCCGTTCC 57.091 47.619 0.00 0.00 0.00 3.62
4313 4407 5.304871 AGGATAGAAAATACTCCCTCCGTTC 59.695 44.000 0.00 0.00 0.00 3.95
4314 4408 5.070580 CAGGATAGAAAATACTCCCTCCGTT 59.929 44.000 0.00 0.00 0.00 4.44
4315 4409 4.589374 CAGGATAGAAAATACTCCCTCCGT 59.411 45.833 0.00 0.00 0.00 4.69
4316 4410 4.833380 TCAGGATAGAAAATACTCCCTCCG 59.167 45.833 0.00 0.00 0.00 4.63
4317 4411 6.327887 AGTTCAGGATAGAAAATACTCCCTCC 59.672 42.308 0.00 0.00 0.00 4.30
4318 4412 7.070074 TGAGTTCAGGATAGAAAATACTCCCTC 59.930 40.741 0.00 0.00 0.00 4.30
4319 4413 6.903534 TGAGTTCAGGATAGAAAATACTCCCT 59.096 38.462 0.00 0.00 0.00 4.20
4320 4414 7.125792 TGAGTTCAGGATAGAAAATACTCCC 57.874 40.000 0.00 0.00 0.00 4.30
4321 4415 9.267084 GAATGAGTTCAGGATAGAAAATACTCC 57.733 37.037 0.00 0.00 34.41 3.85
4322 4416 8.973378 CGAATGAGTTCAGGATAGAAAATACTC 58.027 37.037 0.00 0.00 33.86 2.59
4323 4417 7.928706 CCGAATGAGTTCAGGATAGAAAATACT 59.071 37.037 0.00 0.00 33.86 2.12
4324 4418 7.307455 GCCGAATGAGTTCAGGATAGAAAATAC 60.307 40.741 0.00 0.00 33.86 1.89
4333 4427 1.207791 AGGCCGAATGAGTTCAGGAT 58.792 50.000 0.00 0.00 33.86 3.24
4396 4490 2.001361 CTGGAGTGTACCCGGTAGCG 62.001 65.000 7.49 7.49 0.00 4.26
4454 4548 5.530915 TGTTGATTTTGTTCTCGACCATCTT 59.469 36.000 0.00 0.00 0.00 2.40
4463 4557 4.574599 ACCTGCTGTTGATTTTGTTCTC 57.425 40.909 0.00 0.00 0.00 2.87
4504 4598 1.600636 AGTGGTGGTCATGGCAACG 60.601 57.895 0.00 0.00 42.51 4.10
4525 4619 0.453282 CTGTGTGCTTTTCGGCGATG 60.453 55.000 11.76 5.52 34.52 3.84
4570 4664 3.442625 TCTCGACATCAAATACGGTCTGT 59.557 43.478 0.00 0.00 0.00 3.41
4606 4700 0.239347 GCTGGACACATTGTCTGCAC 59.761 55.000 14.98 0.00 46.19 4.57
4941 5035 9.586435 AAAGGTTGAATATGCAATAAAACTAGC 57.414 29.630 0.00 0.00 29.06 3.42
4948 5051 8.881743 GCAATGAAAAGGTTGAATATGCAATAA 58.118 29.630 0.00 0.00 29.06 1.40
5007 5110 1.068741 CCAGTAGGAAGGTATGTCGGC 59.931 57.143 0.00 0.00 36.89 5.54
5011 5114 2.119495 CAGGCCAGTAGGAAGGTATGT 58.881 52.381 5.01 0.00 36.89 2.29
5012 5115 1.202698 GCAGGCCAGTAGGAAGGTATG 60.203 57.143 5.01 0.00 36.89 2.39
5033 5141 2.164624 AGAGAGTTGCGAGGTGATACAC 59.835 50.000 0.00 0.00 0.00 2.90
5034 5142 2.164422 CAGAGAGTTGCGAGGTGATACA 59.836 50.000 0.00 0.00 0.00 2.29
5036 5144 1.135139 GCAGAGAGTTGCGAGGTGATA 59.865 52.381 0.00 0.00 33.90 2.15
5049 5157 1.516892 GTCTCCTGCAGGCAGAGAG 59.483 63.158 28.91 19.30 46.30 3.20
5057 5165 0.820226 TCGATCTTGGTCTCCTGCAG 59.180 55.000 6.78 6.78 0.00 4.41
5084 5192 1.672854 CCCGATTCTACACCCGCTGA 61.673 60.000 0.00 0.00 0.00 4.26
5093 5201 2.510613 CCTCTCTCTCCCCGATTCTAC 58.489 57.143 0.00 0.00 0.00 2.59
5094 5202 1.425831 CCCTCTCTCTCCCCGATTCTA 59.574 57.143 0.00 0.00 0.00 2.10
5095 5203 0.187361 CCCTCTCTCTCCCCGATTCT 59.813 60.000 0.00 0.00 0.00 2.40
5096 5204 0.186386 TCCCTCTCTCTCCCCGATTC 59.814 60.000 0.00 0.00 0.00 2.52
5097 5205 0.187361 CTCCCTCTCTCTCCCCGATT 59.813 60.000 0.00 0.00 0.00 3.34
5098 5206 0.699577 TCTCCCTCTCTCTCCCCGAT 60.700 60.000 0.00 0.00 0.00 4.18
5099 5207 1.307953 TCTCCCTCTCTCTCCCCGA 60.308 63.158 0.00 0.00 0.00 5.14
5100 5208 1.150536 CTCTCCCTCTCTCTCCCCG 59.849 68.421 0.00 0.00 0.00 5.73
5101 5209 0.478507 CTCTCTCCCTCTCTCTCCCC 59.521 65.000 0.00 0.00 0.00 4.81
5102 5210 1.421646 CTCTCTCTCCCTCTCTCTCCC 59.578 61.905 0.00 0.00 0.00 4.30
5103 5211 2.370189 CTCTCTCTCTCCCTCTCTCTCC 59.630 59.091 0.00 0.00 0.00 3.71
5104 5212 3.041946 ACTCTCTCTCTCCCTCTCTCTC 58.958 54.545 0.00 0.00 0.00 3.20
5105 5213 3.136641 ACTCTCTCTCTCCCTCTCTCT 57.863 52.381 0.00 0.00 0.00 3.10
5106 5214 3.071167 GGTACTCTCTCTCTCCCTCTCTC 59.929 56.522 0.00 0.00 0.00 3.20
5107 5215 3.046374 GGTACTCTCTCTCTCCCTCTCT 58.954 54.545 0.00 0.00 0.00 3.10
5108 5216 3.046374 AGGTACTCTCTCTCTCCCTCTC 58.954 54.545 0.00 0.00 0.00 3.20
5109 5217 3.145559 AGGTACTCTCTCTCTCCCTCT 57.854 52.381 0.00 0.00 0.00 3.69
5110 5218 3.712733 TGTAGGTACTCTCTCTCTCCCTC 59.287 52.174 0.00 0.00 41.75 4.30
5111 5219 3.714798 CTGTAGGTACTCTCTCTCTCCCT 59.285 52.174 0.00 0.00 41.75 4.20
5112 5220 3.712733 TCTGTAGGTACTCTCTCTCTCCC 59.287 52.174 0.00 0.00 41.75 4.30
5113 5221 4.652421 TCTCTGTAGGTACTCTCTCTCTCC 59.348 50.000 0.00 0.00 41.75 3.71
5114 5222 5.363005 AGTCTCTGTAGGTACTCTCTCTCTC 59.637 48.000 0.00 0.00 41.75 3.20
5115 5223 5.278061 AGTCTCTGTAGGTACTCTCTCTCT 58.722 45.833 0.00 0.00 41.75 3.10
5116 5224 5.452917 GGAGTCTCTGTAGGTACTCTCTCTC 60.453 52.000 0.00 0.00 41.75 3.20
5117 5225 4.407945 GGAGTCTCTGTAGGTACTCTCTCT 59.592 50.000 0.00 0.00 41.75 3.10
5118 5226 4.407945 AGGAGTCTCTGTAGGTACTCTCTC 59.592 50.000 0.00 0.00 41.75 3.20
5119 5227 4.368067 AGGAGTCTCTGTAGGTACTCTCT 58.632 47.826 0.00 0.00 41.75 3.10
5120 5228 4.765813 AGGAGTCTCTGTAGGTACTCTC 57.234 50.000 0.00 0.00 41.75 3.20
5121 5229 4.536888 TCAAGGAGTCTCTGTAGGTACTCT 59.463 45.833 0.00 0.00 41.75 3.24
5122 5230 4.846040 TCAAGGAGTCTCTGTAGGTACTC 58.154 47.826 0.00 0.00 41.75 2.59
5123 5231 4.850680 CTCAAGGAGTCTCTGTAGGTACT 58.149 47.826 0.00 0.00 46.37 2.73
5124 5232 3.379057 GCTCAAGGAGTCTCTGTAGGTAC 59.621 52.174 0.00 0.00 31.39 3.34
5125 5233 3.622630 GCTCAAGGAGTCTCTGTAGGTA 58.377 50.000 0.00 0.00 31.39 3.08
5126 5234 2.452505 GCTCAAGGAGTCTCTGTAGGT 58.547 52.381 0.00 0.00 31.39 3.08
5127 5235 1.754226 GGCTCAAGGAGTCTCTGTAGG 59.246 57.143 0.00 0.00 30.76 3.18
5128 5236 2.733956 AGGCTCAAGGAGTCTCTGTAG 58.266 52.381 0.00 0.00 41.05 2.74
5129 5237 2.909504 AGGCTCAAGGAGTCTCTGTA 57.090 50.000 0.00 0.00 41.05 2.74
5130 5238 1.899142 GAAGGCTCAAGGAGTCTCTGT 59.101 52.381 0.22 0.00 44.46 3.41
5131 5239 2.166254 GAGAAGGCTCAAGGAGTCTCTG 59.834 54.545 0.22 0.00 44.46 3.35
5132 5240 2.042979 AGAGAAGGCTCAAGGAGTCTCT 59.957 50.000 6.78 6.78 44.46 3.10
5133 5241 2.427095 GAGAGAAGGCTCAAGGAGTCTC 59.573 54.545 0.22 3.05 44.46 3.36
5135 5243 2.166254 CAGAGAGAAGGCTCAAGGAGTC 59.834 54.545 0.00 0.00 43.81 3.36
5136 5244 2.178580 CAGAGAGAAGGCTCAAGGAGT 58.821 52.381 0.00 0.00 43.81 3.85
5137 5245 1.481772 CCAGAGAGAAGGCTCAAGGAG 59.518 57.143 0.00 0.00 43.81 3.69
5138 5246 1.203237 ACCAGAGAGAAGGCTCAAGGA 60.203 52.381 0.00 0.00 43.81 3.36
5139 5247 1.274712 ACCAGAGAGAAGGCTCAAGG 58.725 55.000 0.00 0.00 43.81 3.61
5140 5248 2.566724 AGAACCAGAGAGAAGGCTCAAG 59.433 50.000 0.00 0.00 43.81 3.02
5141 5249 2.564947 GAGAACCAGAGAGAAGGCTCAA 59.435 50.000 0.00 0.00 43.81 3.02
5142 5250 2.175202 GAGAACCAGAGAGAAGGCTCA 58.825 52.381 0.00 0.00 43.81 4.26
5143 5251 2.166254 CAGAGAACCAGAGAGAAGGCTC 59.834 54.545 0.00 0.00 41.62 4.70
5144 5252 2.178580 CAGAGAACCAGAGAGAAGGCT 58.821 52.381 0.00 0.00 0.00 4.58
5145 5253 1.405391 GCAGAGAACCAGAGAGAAGGC 60.405 57.143 0.00 0.00 0.00 4.35
5146 5254 1.135141 CGCAGAGAACCAGAGAGAAGG 60.135 57.143 0.00 0.00 0.00 3.46
5147 5255 1.543802 ACGCAGAGAACCAGAGAGAAG 59.456 52.381 0.00 0.00 0.00 2.85
5148 5256 1.270826 CACGCAGAGAACCAGAGAGAA 59.729 52.381 0.00 0.00 0.00 2.87
5149 5257 0.884514 CACGCAGAGAACCAGAGAGA 59.115 55.000 0.00 0.00 0.00 3.10
5150 5258 0.884514 TCACGCAGAGAACCAGAGAG 59.115 55.000 0.00 0.00 0.00 3.20
5151 5259 3.036431 TCACGCAGAGAACCAGAGA 57.964 52.632 0.00 0.00 0.00 3.10
5161 5269 0.826256 ACACAGGGTACTCACGCAGA 60.826 55.000 0.00 0.00 39.99 4.26
5162 5270 0.667487 CACACAGGGTACTCACGCAG 60.667 60.000 0.00 0.00 39.99 5.18
5163 5271 1.365999 CACACAGGGTACTCACGCA 59.634 57.895 0.00 0.00 39.99 5.24
5164 5272 0.944311 CACACACAGGGTACTCACGC 60.944 60.000 0.00 0.00 37.87 5.34
5165 5273 0.387929 ACACACACAGGGTACTCACG 59.612 55.000 0.00 0.00 26.29 4.35
5166 5274 1.411246 TCACACACACAGGGTACTCAC 59.589 52.381 0.00 0.00 27.98 3.51
5167 5275 1.411246 GTCACACACACAGGGTACTCA 59.589 52.381 0.00 0.00 27.98 3.41
5168 5276 1.602165 CGTCACACACACAGGGTACTC 60.602 57.143 0.00 0.00 27.98 2.59
5169 5277 0.387929 CGTCACACACACAGGGTACT 59.612 55.000 0.00 0.00 27.98 2.73
5170 5278 0.599204 CCGTCACACACACAGGGTAC 60.599 60.000 0.00 0.00 27.98 3.34
5171 5279 1.743391 CCGTCACACACACAGGGTA 59.257 57.895 0.00 0.00 27.98 3.69
5172 5280 2.504032 CCGTCACACACACAGGGT 59.496 61.111 0.00 0.00 0.00 4.34
5173 5281 2.972505 GCCGTCACACACACAGGG 60.973 66.667 0.00 0.00 0.00 4.45
5174 5282 1.956170 GAGCCGTCACACACACAGG 60.956 63.158 0.00 0.00 0.00 4.00
5175 5283 1.227234 TGAGCCGTCACACACACAG 60.227 57.895 0.00 0.00 0.00 3.66
5176 5284 2.896443 TGAGCCGTCACACACACA 59.104 55.556 0.00 0.00 0.00 3.72
5184 5292 3.625897 CTGGTGGGTGAGCCGTCA 61.626 66.667 0.00 0.00 34.97 4.35
5185 5293 4.394712 CCTGGTGGGTGAGCCGTC 62.395 72.222 0.00 0.00 34.97 4.79
5199 5307 2.040278 AGCTCCCAGTCCTCCCTG 59.960 66.667 0.00 0.00 0.00 4.45
5200 5308 2.366570 GAGCTCCCAGTCCTCCCT 59.633 66.667 0.87 0.00 0.00 4.20
5201 5309 2.766229 GGAGCTCCCAGTCCTCCC 60.766 72.222 23.19 0.00 39.36 4.30
5202 5310 2.366570 AGGAGCTCCCAGTCCTCC 59.633 66.667 29.54 1.36 39.05 4.30
5204 5312 0.118144 AAAGAGGAGCTCCCAGTCCT 59.882 55.000 29.54 15.12 46.46 3.85
5205 5313 0.539518 GAAAGAGGAGCTCCCAGTCC 59.460 60.000 29.54 12.36 37.41 3.85
5206 5314 1.567357 AGAAAGAGGAGCTCCCAGTC 58.433 55.000 29.54 19.91 37.41 3.51
5207 5315 2.625617 CCTAGAAAGAGGAGCTCCCAGT 60.626 54.545 29.54 11.39 39.15 4.00
5208 5316 2.038659 CCTAGAAAGAGGAGCTCCCAG 58.961 57.143 29.54 13.80 39.15 4.45
5209 5317 1.362932 ACCTAGAAAGAGGAGCTCCCA 59.637 52.381 29.54 5.09 39.15 4.37
5210 5318 2.036387 GACCTAGAAAGAGGAGCTCCC 58.964 57.143 29.54 19.90 39.15 4.30
5211 5319 2.741145 TGACCTAGAAAGAGGAGCTCC 58.259 52.381 26.22 26.22 39.15 4.70
5212 5320 3.957497 TGATGACCTAGAAAGAGGAGCTC 59.043 47.826 4.71 4.71 39.15 4.09
5213 5321 3.704061 GTGATGACCTAGAAAGAGGAGCT 59.296 47.826 0.00 0.00 39.15 4.09
5214 5322 3.449018 TGTGATGACCTAGAAAGAGGAGC 59.551 47.826 0.00 0.00 39.15 4.70
5215 5323 5.395103 CCTTGTGATGACCTAGAAAGAGGAG 60.395 48.000 0.00 0.00 39.15 3.69
5216 5324 4.467795 CCTTGTGATGACCTAGAAAGAGGA 59.532 45.833 0.00 0.00 39.15 3.71
5217 5325 4.383552 CCCTTGTGATGACCTAGAAAGAGG 60.384 50.000 0.00 0.00 42.89 3.69
5218 5326 4.223923 ACCCTTGTGATGACCTAGAAAGAG 59.776 45.833 0.00 0.00 0.00 2.85
5219 5327 4.168101 ACCCTTGTGATGACCTAGAAAGA 58.832 43.478 0.00 0.00 0.00 2.52
5220 5328 4.559862 ACCCTTGTGATGACCTAGAAAG 57.440 45.455 0.00 0.00 0.00 2.62
5221 5329 4.506625 CCAACCCTTGTGATGACCTAGAAA 60.507 45.833 0.00 0.00 0.00 2.52
5222 5330 3.009033 CCAACCCTTGTGATGACCTAGAA 59.991 47.826 0.00 0.00 0.00 2.10
5223 5331 2.571653 CCAACCCTTGTGATGACCTAGA 59.428 50.000 0.00 0.00 0.00 2.43
5224 5332 2.356125 CCCAACCCTTGTGATGACCTAG 60.356 54.545 0.00 0.00 0.00 3.02
5225 5333 1.633432 CCCAACCCTTGTGATGACCTA 59.367 52.381 0.00 0.00 0.00 3.08
5226 5334 0.405585 CCCAACCCTTGTGATGACCT 59.594 55.000 0.00 0.00 0.00 3.85
5227 5335 1.250840 GCCCAACCCTTGTGATGACC 61.251 60.000 0.00 0.00 0.00 4.02
5228 5336 1.250840 GGCCCAACCCTTGTGATGAC 61.251 60.000 0.00 0.00 0.00 3.06
5229 5337 1.076549 GGCCCAACCCTTGTGATGA 59.923 57.895 0.00 0.00 0.00 2.92
5230 5338 0.542702 AAGGCCCAACCCTTGTGATG 60.543 55.000 0.00 0.00 43.43 3.07
5231 5339 1.860696 AAGGCCCAACCCTTGTGAT 59.139 52.632 0.00 0.00 43.43 3.06
5232 5340 3.352512 AAGGCCCAACCCTTGTGA 58.647 55.556 0.00 0.00 43.43 3.58
5236 5344 2.201210 CCACAAGGCCCAACCCTT 59.799 61.111 0.00 0.00 45.94 3.95
5237 5345 3.914713 CCCACAAGGCCCAACCCT 61.915 66.667 0.00 0.00 40.58 4.34
5366 5474 2.358737 GGTCAGCCCGGACACAAG 60.359 66.667 0.73 0.00 39.59 3.16
5422 5531 4.651008 GCGTCCGTTCGGTGTCCA 62.651 66.667 11.04 0.00 0.00 4.02
5491 5601 1.080637 GTGCGCATTGATGTTGGCA 60.081 52.632 15.91 0.00 0.00 4.92
5757 5880 1.768684 AAGCGGCCTCCTCTTTCACA 61.769 55.000 0.00 0.00 0.00 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.