Multiple sequence alignment - TraesCS7D01G209500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G209500 chr7D 100.000 2393 0 0 1 2393 167552255 167549863 0.000000e+00 4420.0
1 TraesCS7D01G209500 chr7D 94.847 718 28 6 1677 2393 549274144 549273435 0.000000e+00 1112.0
2 TraesCS7D01G209500 chr7D 89.532 726 58 16 1677 2393 385395070 385394354 0.000000e+00 904.0
3 TraesCS7D01G209500 chr7D 93.750 256 10 2 531 781 558921710 558921964 1.740000e-101 379.0
4 TraesCS7D01G209500 chr7D 82.517 286 43 5 1114 1394 167531928 167531645 6.610000e-61 244.0
5 TraesCS7D01G209500 chr7B 95.501 778 34 1 782 1558 131957215 131956438 0.000000e+00 1242.0
6 TraesCS7D01G209500 chr7B 94.142 478 19 7 1677 2153 597152497 597152028 0.000000e+00 719.0
7 TraesCS7D01G209500 chr7B 82.517 286 43 5 1114 1394 131947699 131947416 6.610000e-61 244.0
8 TraesCS7D01G209500 chr7A 95.125 718 35 0 782 1499 169038712 169037995 0.000000e+00 1133.0
9 TraesCS7D01G209500 chr7A 94.071 253 9 2 531 777 224041400 224041652 1.740000e-101 379.0
10 TraesCS7D01G209500 chr7A 91.700 253 15 5 531 778 238579071 238579322 1.760000e-91 346.0
11 TraesCS7D01G209500 chr7A 83.217 286 41 5 1114 1394 169026244 169025961 3.050000e-64 255.0
12 TraesCS7D01G209500 chr7A 96.226 106 3 1 1571 1676 169037997 169037893 3.160000e-39 172.0
13 TraesCS7D01G209500 chr1D 95.327 642 22 5 1753 2393 108804391 108803757 0.000000e+00 1013.0
14 TraesCS7D01G209500 chr1D 88.439 692 62 12 1711 2393 26649223 26648541 0.000000e+00 819.0
15 TraesCS7D01G209500 chr1D 79.856 139 21 6 33 169 395631575 395631442 7.040000e-16 95.3
16 TraesCS7D01G209500 chr1D 83.019 106 10 5 21 123 395799735 395799635 3.280000e-14 89.8
17 TraesCS7D01G209500 chr5D 86.828 744 60 13 1677 2393 356640328 356641060 0.000000e+00 797.0
18 TraesCS7D01G209500 chr5D 95.219 251 6 2 531 776 103643993 103644242 2.230000e-105 392.0
19 TraesCS7D01G209500 chr2B 95.607 478 14 6 1677 2153 250067584 250068055 0.000000e+00 760.0
20 TraesCS7D01G209500 chr2B 93.254 252 12 1 531 777 49656050 49656301 1.350000e-97 366.0
21 TraesCS7D01G209500 chr2B 91.016 256 14 4 531 778 543172748 543173002 1.060000e-88 337.0
22 TraesCS7D01G209500 chr2B 97.938 194 3 1 2201 2393 250068052 250068245 3.810000e-88 335.0
23 TraesCS7D01G209500 chr2B 93.264 193 7 1 2201 2393 219887679 219887493 1.810000e-71 279.0
24 TraesCS7D01G209500 chr3B 93.724 478 21 7 1677 2153 688544129 688544598 0.000000e+00 708.0
25 TraesCS7D01G209500 chr3B 83.846 650 77 20 1680 2311 768751195 768750556 5.700000e-166 593.0
26 TraesCS7D01G209500 chr1B 93.305 478 24 6 1677 2153 580222226 580222696 0.000000e+00 699.0
27 TraesCS7D01G209500 chr1B 80.450 711 91 35 1677 2360 60587597 60586908 1.280000e-137 499.0
28 TraesCS7D01G209500 chr4A 94.071 253 9 2 531 777 29181173 29181425 1.740000e-101 379.0
29 TraesCS7D01G209500 chr6A 93.651 252 11 1 531 777 80040394 80040143 2.910000e-99 372.0
30 TraesCS7D01G209500 chr3D 92.885 253 12 2 531 777 15095328 15095580 1.750000e-96 363.0
31 TraesCS7D01G209500 chr3A 79.252 294 42 13 1 277 160010452 160010161 1.130000e-43 187.0
32 TraesCS7D01G209500 chr1A 75.604 455 59 28 21 442 97821960 97822395 6.800000e-41 178.0
33 TraesCS7D01G209500 chr1A 75.455 330 40 23 14 339 490088850 490088558 3.230000e-24 122.0
34 TraesCS7D01G209500 chr1A 73.734 316 56 19 14 321 489928090 489927794 5.440000e-17 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G209500 chr7D 167549863 167552255 2392 True 4420.0 4420 100.0000 1 2393 1 chr7D.!!$R2 2392
1 TraesCS7D01G209500 chr7D 549273435 549274144 709 True 1112.0 1112 94.8470 1677 2393 1 chr7D.!!$R4 716
2 TraesCS7D01G209500 chr7D 385394354 385395070 716 True 904.0 904 89.5320 1677 2393 1 chr7D.!!$R3 716
3 TraesCS7D01G209500 chr7B 131956438 131957215 777 True 1242.0 1242 95.5010 782 1558 1 chr7B.!!$R2 776
4 TraesCS7D01G209500 chr7A 169037893 169038712 819 True 652.5 1133 95.6755 782 1676 2 chr7A.!!$R2 894
5 TraesCS7D01G209500 chr1D 108803757 108804391 634 True 1013.0 1013 95.3270 1753 2393 1 chr1D.!!$R2 640
6 TraesCS7D01G209500 chr1D 26648541 26649223 682 True 819.0 819 88.4390 1711 2393 1 chr1D.!!$R1 682
7 TraesCS7D01G209500 chr5D 356640328 356641060 732 False 797.0 797 86.8280 1677 2393 1 chr5D.!!$F2 716
8 TraesCS7D01G209500 chr2B 250067584 250068245 661 False 547.5 760 96.7725 1677 2393 2 chr2B.!!$F3 716
9 TraesCS7D01G209500 chr3B 768750556 768751195 639 True 593.0 593 83.8460 1680 2311 1 chr3B.!!$R1 631
10 TraesCS7D01G209500 chr1B 60586908 60587597 689 True 499.0 499 80.4500 1677 2360 1 chr1B.!!$R1 683

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
456 457 0.103208 AGTGATGCTCGGTTCGATCC 59.897 55.0 2.15 2.15 34.61 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1569 1571 0.038526 AACTCGCAGTCCTACCGTTG 60.039 55.0 0.0 0.0 0.0 4.1 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.034685 TCTGGACAAGCCTAAAAAGTAAAAC 57.965 36.000 0.00 0.00 37.63 2.43
25 26 6.831868 TCTGGACAAGCCTAAAAAGTAAAACT 59.168 34.615 0.00 0.00 37.63 2.66
26 27 6.801575 TGGACAAGCCTAAAAAGTAAAACTG 58.198 36.000 0.00 0.00 37.63 3.16
27 28 6.378848 TGGACAAGCCTAAAAAGTAAAACTGT 59.621 34.615 0.00 0.00 37.63 3.55
28 29 6.916387 GGACAAGCCTAAAAAGTAAAACTGTC 59.084 38.462 0.00 0.00 0.00 3.51
29 30 6.802608 ACAAGCCTAAAAAGTAAAACTGTCC 58.197 36.000 0.00 0.00 0.00 4.02
30 31 6.605995 ACAAGCCTAAAAAGTAAAACTGTCCT 59.394 34.615 0.00 0.00 0.00 3.85
31 32 7.776500 ACAAGCCTAAAAAGTAAAACTGTCCTA 59.224 33.333 0.00 0.00 0.00 2.94
32 33 7.741027 AGCCTAAAAAGTAAAACTGTCCTAC 57.259 36.000 0.00 0.00 0.00 3.18
33 34 6.713903 AGCCTAAAAAGTAAAACTGTCCTACC 59.286 38.462 0.00 0.00 0.00 3.18
34 35 6.487668 GCCTAAAAAGTAAAACTGTCCTACCA 59.512 38.462 0.00 0.00 0.00 3.25
35 36 7.176165 GCCTAAAAAGTAAAACTGTCCTACCAT 59.824 37.037 0.00 0.00 0.00 3.55
36 37 9.074576 CCTAAAAAGTAAAACTGTCCTACCATT 57.925 33.333 0.00 0.00 0.00 3.16
69 70 6.499106 AAAAATTCCACCCTCTCAAACATT 57.501 33.333 0.00 0.00 0.00 2.71
70 71 7.610580 AAAAATTCCACCCTCTCAAACATTA 57.389 32.000 0.00 0.00 0.00 1.90
71 72 7.610580 AAAATTCCACCCTCTCAAACATTAA 57.389 32.000 0.00 0.00 0.00 1.40
72 73 7.610580 AAATTCCACCCTCTCAAACATTAAA 57.389 32.000 0.00 0.00 0.00 1.52
73 74 7.610580 AATTCCACCCTCTCAAACATTAAAA 57.389 32.000 0.00 0.00 0.00 1.52
74 75 7.610580 ATTCCACCCTCTCAAACATTAAAAA 57.389 32.000 0.00 0.00 0.00 1.94
120 121 8.635765 AAAAATGCCACTCTCTCAATAACTAA 57.364 30.769 0.00 0.00 0.00 2.24
121 122 8.635765 AAAATGCCACTCTCTCAATAACTAAA 57.364 30.769 0.00 0.00 0.00 1.85
122 123 8.635765 AAATGCCACTCTCTCAATAACTAAAA 57.364 30.769 0.00 0.00 0.00 1.52
123 124 8.814038 AATGCCACTCTCTCAATAACTAAAAT 57.186 30.769 0.00 0.00 0.00 1.82
124 125 7.615582 TGCCACTCTCTCAATAACTAAAATG 57.384 36.000 0.00 0.00 0.00 2.32
125 126 7.394016 TGCCACTCTCTCAATAACTAAAATGA 58.606 34.615 0.00 0.00 0.00 2.57
126 127 7.334421 TGCCACTCTCTCAATAACTAAAATGAC 59.666 37.037 0.00 0.00 0.00 3.06
127 128 7.334421 GCCACTCTCTCAATAACTAAAATGACA 59.666 37.037 0.00 0.00 0.00 3.58
128 129 9.388506 CCACTCTCTCAATAACTAAAATGACAT 57.611 33.333 0.00 0.00 0.00 3.06
130 131 9.606631 ACTCTCTCAATAACTAAAATGACATCC 57.393 33.333 0.00 0.00 0.00 3.51
131 132 9.829507 CTCTCTCAATAACTAAAATGACATCCT 57.170 33.333 0.00 0.00 0.00 3.24
188 189 6.869421 AAAATTACATGCACTTAATCACGC 57.131 33.333 0.00 0.00 0.00 5.34
189 190 4.552166 ATTACATGCACTTAATCACGCC 57.448 40.909 0.00 0.00 0.00 5.68
190 191 1.819928 ACATGCACTTAATCACGCCA 58.180 45.000 0.00 0.00 0.00 5.69
191 192 2.368439 ACATGCACTTAATCACGCCAT 58.632 42.857 0.00 0.00 0.00 4.40
192 193 3.540617 ACATGCACTTAATCACGCCATA 58.459 40.909 0.00 0.00 0.00 2.74
193 194 3.944650 ACATGCACTTAATCACGCCATAA 59.055 39.130 0.00 0.00 0.00 1.90
194 195 4.397730 ACATGCACTTAATCACGCCATAAA 59.602 37.500 0.00 0.00 0.00 1.40
195 196 5.105957 ACATGCACTTAATCACGCCATAAAA 60.106 36.000 0.00 0.00 0.00 1.52
196 197 5.378292 TGCACTTAATCACGCCATAAAAA 57.622 34.783 0.00 0.00 0.00 1.94
197 198 5.960113 TGCACTTAATCACGCCATAAAAAT 58.040 33.333 0.00 0.00 0.00 1.82
198 199 7.089770 TGCACTTAATCACGCCATAAAAATA 57.910 32.000 0.00 0.00 0.00 1.40
199 200 7.539436 TGCACTTAATCACGCCATAAAAATAA 58.461 30.769 0.00 0.00 0.00 1.40
200 201 8.029522 TGCACTTAATCACGCCATAAAAATAAA 58.970 29.630 0.00 0.00 0.00 1.40
201 202 8.865001 GCACTTAATCACGCCATAAAAATAAAA 58.135 29.630 0.00 0.00 0.00 1.52
206 207 6.654793 TCACGCCATAAAAATAAAAATGCC 57.345 33.333 0.00 0.00 0.00 4.40
207 208 6.166279 TCACGCCATAAAAATAAAAATGCCA 58.834 32.000 0.00 0.00 0.00 4.92
208 209 6.820656 TCACGCCATAAAAATAAAAATGCCAT 59.179 30.769 0.00 0.00 0.00 4.40
209 210 7.010923 TCACGCCATAAAAATAAAAATGCCATC 59.989 33.333 0.00 0.00 0.00 3.51
210 211 7.011295 CACGCCATAAAAATAAAAATGCCATCT 59.989 33.333 0.00 0.00 0.00 2.90
211 212 7.224557 ACGCCATAAAAATAAAAATGCCATCTC 59.775 33.333 0.00 0.00 0.00 2.75
212 213 7.439056 CGCCATAAAAATAAAAATGCCATCTCT 59.561 33.333 0.00 0.00 0.00 3.10
213 214 8.768019 GCCATAAAAATAAAAATGCCATCTCTC 58.232 33.333 0.00 0.00 0.00 3.20
214 215 9.820725 CCATAAAAATAAAAATGCCATCTCTCA 57.179 29.630 0.00 0.00 0.00 3.27
229 230 9.353431 TGCCATCTCTCAATAATAAAAATAGCA 57.647 29.630 0.00 0.00 0.00 3.49
278 279 9.270640 TCATATTGTTAATAAAATTGCCATGCC 57.729 29.630 0.00 0.00 0.00 4.40
279 280 9.053840 CATATTGTTAATAAAATTGCCATGCCA 57.946 29.630 0.00 0.00 0.00 4.92
280 281 9.796180 ATATTGTTAATAAAATTGCCATGCCAT 57.204 25.926 0.00 0.00 0.00 4.40
281 282 7.934855 TTGTTAATAAAATTGCCATGCCATT 57.065 28.000 0.00 0.00 0.00 3.16
282 283 9.624373 ATTGTTAATAAAATTGCCATGCCATTA 57.376 25.926 0.00 0.00 0.00 1.90
283 284 9.453572 TTGTTAATAAAATTGCCATGCCATTAA 57.546 25.926 0.00 0.00 0.00 1.40
284 285 9.453572 TGTTAATAAAATTGCCATGCCATTAAA 57.546 25.926 0.00 0.00 0.00 1.52
382 383 5.903198 AAAAATCAGGATTTTGGGGTTGA 57.097 34.783 17.88 0.00 46.76 3.18
383 384 5.903198 AAAATCAGGATTTTGGGGTTGAA 57.097 34.783 16.79 0.00 45.99 2.69
384 385 5.903198 AAATCAGGATTTTGGGGTTGAAA 57.097 34.783 1.50 0.00 37.74 2.69
385 386 5.903198 AATCAGGATTTTGGGGTTGAAAA 57.097 34.783 0.00 0.00 0.00 2.29
386 387 5.903198 ATCAGGATTTTGGGGTTGAAAAA 57.097 34.783 0.00 0.00 0.00 1.94
387 388 5.903198 TCAGGATTTTGGGGTTGAAAAAT 57.097 34.783 0.00 0.00 38.39 1.82
388 389 7.566658 ATCAGGATTTTGGGGTTGAAAAATA 57.433 32.000 0.00 0.00 36.40 1.40
389 390 7.566658 TCAGGATTTTGGGGTTGAAAAATAT 57.433 32.000 0.00 0.00 36.40 1.28
390 391 8.671987 TCAGGATTTTGGGGTTGAAAAATATA 57.328 30.769 0.00 0.00 36.40 0.86
391 392 9.278011 TCAGGATTTTGGGGTTGAAAAATATAT 57.722 29.630 0.00 0.00 36.40 0.86
396 397 9.791801 ATTTTGGGGTTGAAAAATATATATGCC 57.208 29.630 0.00 0.00 34.92 4.40
397 398 7.921041 TTGGGGTTGAAAAATATATATGCCA 57.079 32.000 0.00 0.00 0.00 4.92
398 399 8.503428 TTGGGGTTGAAAAATATATATGCCAT 57.497 30.769 0.00 0.00 0.00 4.40
399 400 8.133024 TGGGGTTGAAAAATATATATGCCATC 57.867 34.615 0.00 0.00 0.00 3.51
400 401 7.955185 TGGGGTTGAAAAATATATATGCCATCT 59.045 33.333 0.00 0.00 0.00 2.90
401 402 8.815912 GGGGTTGAAAAATATATATGCCATCTT 58.184 33.333 0.00 0.00 0.00 2.40
411 412 9.806448 AATATATATGCCATCTTAAACACACCA 57.194 29.630 0.00 0.00 0.00 4.17
412 413 7.750229 ATATATGCCATCTTAAACACACCAG 57.250 36.000 0.00 0.00 0.00 4.00
413 414 3.500448 TGCCATCTTAAACACACCAGA 57.500 42.857 0.00 0.00 0.00 3.86
414 415 4.032960 TGCCATCTTAAACACACCAGAT 57.967 40.909 0.00 0.00 0.00 2.90
415 416 4.406456 TGCCATCTTAAACACACCAGATT 58.594 39.130 0.00 0.00 0.00 2.40
416 417 4.458989 TGCCATCTTAAACACACCAGATTC 59.541 41.667 0.00 0.00 0.00 2.52
417 418 4.458989 GCCATCTTAAACACACCAGATTCA 59.541 41.667 0.00 0.00 0.00 2.57
418 419 5.619981 GCCATCTTAAACACACCAGATTCAC 60.620 44.000 0.00 0.00 0.00 3.18
419 420 5.473162 CCATCTTAAACACACCAGATTCACA 59.527 40.000 0.00 0.00 0.00 3.58
420 421 6.016360 CCATCTTAAACACACCAGATTCACAA 60.016 38.462 0.00 0.00 0.00 3.33
421 422 7.424803 CATCTTAAACACACCAGATTCACAAA 58.575 34.615 0.00 0.00 0.00 2.83
422 423 7.397892 TCTTAAACACACCAGATTCACAAAA 57.602 32.000 0.00 0.00 0.00 2.44
423 424 7.479980 TCTTAAACACACCAGATTCACAAAAG 58.520 34.615 0.00 0.00 0.00 2.27
424 425 4.654091 AACACACCAGATTCACAAAAGG 57.346 40.909 0.00 0.00 0.00 3.11
425 426 2.362077 ACACACCAGATTCACAAAAGGC 59.638 45.455 0.00 0.00 0.00 4.35
426 427 1.963515 ACACCAGATTCACAAAAGGCC 59.036 47.619 0.00 0.00 0.00 5.19
427 428 1.273327 CACCAGATTCACAAAAGGCCC 59.727 52.381 0.00 0.00 0.00 5.80
428 429 1.147817 ACCAGATTCACAAAAGGCCCT 59.852 47.619 0.00 0.00 0.00 5.19
429 430 1.821136 CCAGATTCACAAAAGGCCCTC 59.179 52.381 0.00 0.00 0.00 4.30
430 431 2.556114 CCAGATTCACAAAAGGCCCTCT 60.556 50.000 0.00 0.00 0.00 3.69
431 432 2.751806 CAGATTCACAAAAGGCCCTCTC 59.248 50.000 0.00 0.00 0.00 3.20
432 433 2.376518 AGATTCACAAAAGGCCCTCTCA 59.623 45.455 0.00 0.00 0.00 3.27
433 434 2.276732 TTCACAAAAGGCCCTCTCAG 57.723 50.000 0.00 0.00 0.00 3.35
434 435 0.250901 TCACAAAAGGCCCTCTCAGC 60.251 55.000 0.00 0.00 0.00 4.26
440 441 4.106925 GGCCCTCTCAGCCCAGTG 62.107 72.222 0.00 0.00 45.16 3.66
441 442 3.005539 GCCCTCTCAGCCCAGTGA 61.006 66.667 0.00 0.00 0.00 3.41
442 443 2.373707 GCCCTCTCAGCCCAGTGAT 61.374 63.158 0.00 0.00 0.00 3.06
443 444 1.525923 CCCTCTCAGCCCAGTGATG 59.474 63.158 0.00 0.00 0.00 3.07
444 445 1.153208 CCTCTCAGCCCAGTGATGC 60.153 63.158 0.00 0.00 0.00 3.91
445 446 1.624479 CCTCTCAGCCCAGTGATGCT 61.624 60.000 1.70 1.70 38.67 3.79
446 447 0.179078 CTCTCAGCCCAGTGATGCTC 60.179 60.000 4.36 0.00 35.12 4.26
447 448 1.521010 CTCAGCCCAGTGATGCTCG 60.521 63.158 4.36 2.30 35.12 5.03
448 449 2.513204 CAGCCCAGTGATGCTCGG 60.513 66.667 4.36 0.00 35.12 4.63
449 450 3.005539 AGCCCAGTGATGCTCGGT 61.006 61.111 1.70 0.00 30.33 4.69
450 451 2.045926 GCCCAGTGATGCTCGGTT 60.046 61.111 0.00 0.00 0.00 4.44
451 452 2.109126 GCCCAGTGATGCTCGGTTC 61.109 63.158 0.00 0.00 0.00 3.62
452 453 1.811266 CCCAGTGATGCTCGGTTCG 60.811 63.158 0.00 0.00 0.00 3.95
453 454 1.215382 CCAGTGATGCTCGGTTCGA 59.785 57.895 0.00 0.00 0.00 3.71
454 455 0.179100 CCAGTGATGCTCGGTTCGAT 60.179 55.000 0.00 0.00 34.61 3.59
455 456 1.203928 CAGTGATGCTCGGTTCGATC 58.796 55.000 0.00 0.00 34.61 3.69
456 457 0.103208 AGTGATGCTCGGTTCGATCC 59.897 55.000 2.15 2.15 34.61 3.36
457 458 0.876342 GTGATGCTCGGTTCGATCCC 60.876 60.000 6.94 0.00 34.61 3.85
458 459 1.301009 GATGCTCGGTTCGATCCCC 60.301 63.158 6.94 0.00 34.61 4.81
459 460 1.749334 GATGCTCGGTTCGATCCCCT 61.749 60.000 6.94 0.00 34.61 4.79
460 461 1.749334 ATGCTCGGTTCGATCCCCTC 61.749 60.000 6.94 0.00 34.61 4.30
468 469 4.271816 CGATCCCCTCGCCTCACG 62.272 72.222 0.00 0.00 41.14 4.35
484 485 6.582437 GCCTCACGAATTTTTGAAAAAGAA 57.418 33.333 9.13 0.00 0.00 2.52
485 486 6.999456 GCCTCACGAATTTTTGAAAAAGAAA 58.001 32.000 9.13 0.00 0.00 2.52
486 487 7.460296 GCCTCACGAATTTTTGAAAAAGAAAA 58.540 30.769 9.13 0.00 0.00 2.29
487 488 7.960195 GCCTCACGAATTTTTGAAAAAGAAAAA 59.040 29.630 9.13 0.00 36.86 1.94
488 489 9.261318 CCTCACGAATTTTTGAAAAAGAAAAAC 57.739 29.630 9.13 0.00 35.64 2.43
489 490 9.261318 CTCACGAATTTTTGAAAAAGAAAAACC 57.739 29.630 9.13 0.00 35.64 3.27
490 491 8.774586 TCACGAATTTTTGAAAAAGAAAAACCA 58.225 25.926 9.13 0.00 35.64 3.67
491 492 8.836109 CACGAATTTTTGAAAAAGAAAAACCAC 58.164 29.630 9.13 0.00 35.64 4.16
492 493 7.742525 ACGAATTTTTGAAAAAGAAAAACCACG 59.257 29.630 9.13 0.00 35.64 4.94
493 494 7.252833 CGAATTTTTGAAAAAGAAAAACCACGC 60.253 33.333 9.13 0.00 35.64 5.34
494 495 4.569801 TTTGAAAAAGAAAAACCACGCG 57.430 36.364 3.53 3.53 0.00 6.01
495 496 3.219052 TGAAAAAGAAAAACCACGCGT 57.781 38.095 5.58 5.58 0.00 6.01
496 497 3.172824 TGAAAAAGAAAAACCACGCGTC 58.827 40.909 9.86 0.00 0.00 5.19
497 498 2.197792 AAAAGAAAAACCACGCGTCC 57.802 45.000 9.86 0.00 0.00 4.79
498 499 1.096416 AAAGAAAAACCACGCGTCCA 58.904 45.000 9.86 0.00 0.00 4.02
499 500 0.379316 AAGAAAAACCACGCGTCCAC 59.621 50.000 9.86 0.00 0.00 4.02
500 501 1.009335 GAAAAACCACGCGTCCACC 60.009 57.895 9.86 0.00 0.00 4.61
501 502 2.704973 GAAAAACCACGCGTCCACCG 62.705 60.000 9.86 0.00 40.40 4.94
502 503 3.736732 AAAACCACGCGTCCACCGA 62.737 57.895 9.86 0.00 39.56 4.69
503 504 3.736732 AAACCACGCGTCCACCGAA 62.737 57.895 9.86 0.00 39.56 4.30
504 505 3.736732 AACCACGCGTCCACCGAAA 62.737 57.895 9.86 0.00 39.56 3.46
505 506 3.411351 CCACGCGTCCACCGAAAG 61.411 66.667 9.86 0.00 39.56 2.62
506 507 4.072088 CACGCGTCCACCGAAAGC 62.072 66.667 9.86 0.00 39.56 3.51
507 508 4.595538 ACGCGTCCACCGAAAGCA 62.596 61.111 5.58 0.00 39.56 3.91
508 509 3.118454 CGCGTCCACCGAAAGCAT 61.118 61.111 0.00 0.00 39.56 3.79
509 510 2.785258 GCGTCCACCGAAAGCATC 59.215 61.111 0.00 0.00 39.56 3.91
510 511 1.741770 GCGTCCACCGAAAGCATCT 60.742 57.895 0.00 0.00 39.56 2.90
511 512 1.970917 GCGTCCACCGAAAGCATCTG 61.971 60.000 0.00 0.00 39.56 2.90
512 513 0.389817 CGTCCACCGAAAGCATCTGA 60.390 55.000 0.00 0.00 39.56 3.27
513 514 1.808411 GTCCACCGAAAGCATCTGAA 58.192 50.000 0.00 0.00 0.00 3.02
514 515 1.464997 GTCCACCGAAAGCATCTGAAC 59.535 52.381 0.00 0.00 0.00 3.18
515 516 1.071542 TCCACCGAAAGCATCTGAACA 59.928 47.619 0.00 0.00 0.00 3.18
516 517 1.879380 CCACCGAAAGCATCTGAACAA 59.121 47.619 0.00 0.00 0.00 2.83
517 518 2.350772 CCACCGAAAGCATCTGAACAAC 60.351 50.000 0.00 0.00 0.00 3.32
518 519 2.290367 CACCGAAAGCATCTGAACAACA 59.710 45.455 0.00 0.00 0.00 3.33
519 520 2.948979 ACCGAAAGCATCTGAACAACAA 59.051 40.909 0.00 0.00 0.00 2.83
520 521 3.380004 ACCGAAAGCATCTGAACAACAAA 59.620 39.130 0.00 0.00 0.00 2.83
521 522 3.730715 CCGAAAGCATCTGAACAACAAAC 59.269 43.478 0.00 0.00 0.00 2.93
522 523 3.730715 CGAAAGCATCTGAACAACAAACC 59.269 43.478 0.00 0.00 0.00 3.27
523 524 4.681744 GAAAGCATCTGAACAACAAACCA 58.318 39.130 0.00 0.00 0.00 3.67
524 525 3.715628 AGCATCTGAACAACAAACCAC 57.284 42.857 0.00 0.00 0.00 4.16
525 526 3.023119 AGCATCTGAACAACAAACCACA 58.977 40.909 0.00 0.00 0.00 4.17
526 527 3.115554 GCATCTGAACAACAAACCACAC 58.884 45.455 0.00 0.00 0.00 3.82
527 528 3.705604 CATCTGAACAACAAACCACACC 58.294 45.455 0.00 0.00 0.00 4.16
528 529 2.796557 TCTGAACAACAAACCACACCA 58.203 42.857 0.00 0.00 0.00 4.17
529 530 2.752354 TCTGAACAACAAACCACACCAG 59.248 45.455 0.00 0.00 0.00 4.00
530 531 2.491693 CTGAACAACAAACCACACCAGT 59.508 45.455 0.00 0.00 0.00 4.00
531 532 2.230025 TGAACAACAAACCACACCAGTG 59.770 45.455 0.00 0.00 45.47 3.66
542 543 2.717639 ACACCAGTGATCCTAATGCC 57.282 50.000 4.48 0.00 0.00 4.40
543 544 2.200081 ACACCAGTGATCCTAATGCCT 58.800 47.619 4.48 0.00 0.00 4.75
544 545 3.384168 ACACCAGTGATCCTAATGCCTA 58.616 45.455 4.48 0.00 0.00 3.93
545 546 3.134804 ACACCAGTGATCCTAATGCCTAC 59.865 47.826 4.48 0.00 0.00 3.18
546 547 3.134623 CACCAGTGATCCTAATGCCTACA 59.865 47.826 0.00 0.00 0.00 2.74
547 548 3.976654 ACCAGTGATCCTAATGCCTACAT 59.023 43.478 0.00 0.00 38.49 2.29
548 549 4.202398 ACCAGTGATCCTAATGCCTACATG 60.202 45.833 0.00 0.00 36.36 3.21
549 550 4.321718 CAGTGATCCTAATGCCTACATGG 58.678 47.826 0.00 0.00 36.36 3.66
550 551 3.328931 AGTGATCCTAATGCCTACATGGG 59.671 47.826 0.00 0.00 36.36 4.00
551 552 3.327757 GTGATCCTAATGCCTACATGGGA 59.672 47.826 0.00 0.00 40.75 4.37
552 553 3.584406 TGATCCTAATGCCTACATGGGAG 59.416 47.826 0.00 0.00 40.22 4.30
553 554 3.060479 TCCTAATGCCTACATGGGAGT 57.940 47.619 0.00 0.00 40.33 3.85
554 555 2.705658 TCCTAATGCCTACATGGGAGTG 59.294 50.000 0.00 0.00 40.33 3.51
555 556 2.224621 CCTAATGCCTACATGGGAGTGG 60.225 54.545 0.00 0.00 40.33 4.00
556 557 1.595311 AATGCCTACATGGGAGTGGA 58.405 50.000 0.00 0.00 40.33 4.02
557 558 0.839946 ATGCCTACATGGGAGTGGAC 59.160 55.000 0.00 0.00 40.33 4.02
558 559 1.144057 GCCTACATGGGAGTGGACG 59.856 63.158 0.00 0.00 36.00 4.79
559 560 1.614241 GCCTACATGGGAGTGGACGT 61.614 60.000 0.00 0.00 36.00 4.34
560 561 0.460311 CCTACATGGGAGTGGACGTC 59.540 60.000 7.13 7.13 0.00 4.34
561 562 0.460311 CTACATGGGAGTGGACGTCC 59.540 60.000 28.17 28.17 0.00 4.79
572 573 1.199615 TGGACGTCCCAATCATAGCA 58.800 50.000 31.19 5.95 43.29 3.49
573 574 1.138859 TGGACGTCCCAATCATAGCAG 59.861 52.381 31.19 0.00 43.29 4.24
574 575 1.412710 GGACGTCCCAATCATAGCAGA 59.587 52.381 24.75 0.00 34.14 4.26
575 576 2.158957 GGACGTCCCAATCATAGCAGAA 60.159 50.000 24.75 0.00 34.14 3.02
576 577 3.495100 GGACGTCCCAATCATAGCAGAAT 60.495 47.826 24.75 0.00 34.14 2.40
577 578 3.470709 ACGTCCCAATCATAGCAGAATG 58.529 45.455 0.00 0.00 40.87 2.67
590 591 2.704464 CAGAATGCTCCCTCATGTCA 57.296 50.000 0.00 0.00 0.00 3.58
591 592 2.995283 CAGAATGCTCCCTCATGTCAA 58.005 47.619 0.00 0.00 0.00 3.18
592 593 3.552875 CAGAATGCTCCCTCATGTCAAT 58.447 45.455 0.00 0.00 0.00 2.57
593 594 3.315470 CAGAATGCTCCCTCATGTCAATG 59.685 47.826 0.00 0.00 34.88 2.82
594 595 2.359981 ATGCTCCCTCATGTCAATGG 57.640 50.000 0.00 0.00 34.30 3.16
595 596 1.288188 TGCTCCCTCATGTCAATGGA 58.712 50.000 0.00 0.00 34.30 3.41
596 597 1.848388 TGCTCCCTCATGTCAATGGAT 59.152 47.619 0.00 0.00 34.30 3.41
597 598 2.242965 TGCTCCCTCATGTCAATGGATT 59.757 45.455 0.00 0.00 34.30 3.01
598 599 3.459227 TGCTCCCTCATGTCAATGGATTA 59.541 43.478 0.00 0.00 34.30 1.75
599 600 4.105217 TGCTCCCTCATGTCAATGGATTAT 59.895 41.667 0.00 0.00 34.30 1.28
600 601 4.458295 GCTCCCTCATGTCAATGGATTATG 59.542 45.833 0.00 0.00 34.30 1.90
601 602 4.401022 TCCCTCATGTCAATGGATTATGC 58.599 43.478 0.00 0.00 34.30 3.14
602 603 4.105217 TCCCTCATGTCAATGGATTATGCT 59.895 41.667 0.00 0.00 34.30 3.79
603 604 4.831155 CCCTCATGTCAATGGATTATGCTT 59.169 41.667 0.00 0.00 34.30 3.91
604 605 5.048224 CCCTCATGTCAATGGATTATGCTTC 60.048 44.000 0.00 0.00 34.30 3.86
605 606 5.768662 CCTCATGTCAATGGATTATGCTTCT 59.231 40.000 0.00 0.00 34.30 2.85
606 607 6.938596 CCTCATGTCAATGGATTATGCTTCTA 59.061 38.462 0.00 0.00 34.30 2.10
607 608 7.610692 CCTCATGTCAATGGATTATGCTTCTAT 59.389 37.037 0.00 0.00 34.30 1.98
608 609 8.557592 TCATGTCAATGGATTATGCTTCTATC 57.442 34.615 0.00 0.00 34.30 2.08
609 610 8.158789 TCATGTCAATGGATTATGCTTCTATCA 58.841 33.333 0.00 0.00 34.30 2.15
610 611 7.974482 TGTCAATGGATTATGCTTCTATCAG 57.026 36.000 0.00 0.00 0.00 2.90
611 612 7.512130 TGTCAATGGATTATGCTTCTATCAGT 58.488 34.615 0.00 0.00 0.00 3.41
612 613 7.994911 TGTCAATGGATTATGCTTCTATCAGTT 59.005 33.333 0.00 0.00 0.00 3.16
613 614 8.844244 GTCAATGGATTATGCTTCTATCAGTTT 58.156 33.333 0.00 0.00 0.00 2.66
614 615 9.412460 TCAATGGATTATGCTTCTATCAGTTTT 57.588 29.630 0.00 0.00 0.00 2.43
615 616 9.459640 CAATGGATTATGCTTCTATCAGTTTTG 57.540 33.333 0.00 0.00 0.00 2.44
616 617 8.985315 ATGGATTATGCTTCTATCAGTTTTGA 57.015 30.769 0.00 0.00 37.81 2.69
617 618 8.985315 TGGATTATGCTTCTATCAGTTTTGAT 57.015 30.769 0.00 0.00 45.77 2.57
618 619 9.412460 TGGATTATGCTTCTATCAGTTTTGATT 57.588 29.630 0.00 0.00 41.24 2.57
634 635 8.821894 CAGTTTTGATTATTGTAGTAGAGAGGC 58.178 37.037 0.00 0.00 0.00 4.70
635 636 8.540388 AGTTTTGATTATTGTAGTAGAGAGGCA 58.460 33.333 0.00 0.00 0.00 4.75
636 637 9.162764 GTTTTGATTATTGTAGTAGAGAGGCAA 57.837 33.333 0.00 0.00 0.00 4.52
637 638 9.733556 TTTTGATTATTGTAGTAGAGAGGCAAA 57.266 29.630 0.00 0.00 0.00 3.68
638 639 8.718102 TTGATTATTGTAGTAGAGAGGCAAAC 57.282 34.615 0.00 0.00 0.00 2.93
639 640 8.079211 TGATTATTGTAGTAGAGAGGCAAACT 57.921 34.615 0.00 0.00 0.00 2.66
640 641 8.540388 TGATTATTGTAGTAGAGAGGCAAACTT 58.460 33.333 0.00 0.00 0.00 2.66
641 642 8.723942 ATTATTGTAGTAGAGAGGCAAACTTG 57.276 34.615 0.00 0.00 0.00 3.16
642 643 5.801531 TTGTAGTAGAGAGGCAAACTTGA 57.198 39.130 0.00 0.00 0.00 3.02
643 644 6.360370 TTGTAGTAGAGAGGCAAACTTGAT 57.640 37.500 0.00 0.00 0.00 2.57
644 645 7.476540 TTGTAGTAGAGAGGCAAACTTGATA 57.523 36.000 0.00 0.00 0.00 2.15
645 646 7.101652 TGTAGTAGAGAGGCAAACTTGATAG 57.898 40.000 0.00 0.00 0.00 2.08
646 647 5.017294 AGTAGAGAGGCAAACTTGATAGC 57.983 43.478 0.00 0.00 0.00 2.97
647 648 4.714308 AGTAGAGAGGCAAACTTGATAGCT 59.286 41.667 0.00 0.00 0.00 3.32
648 649 3.871485 AGAGAGGCAAACTTGATAGCTG 58.129 45.455 0.00 0.00 0.00 4.24
649 650 3.517100 AGAGAGGCAAACTTGATAGCTGA 59.483 43.478 0.00 0.00 0.00 4.26
650 651 4.163839 AGAGAGGCAAACTTGATAGCTGAT 59.836 41.667 0.00 0.00 0.00 2.90
651 652 4.197750 AGAGGCAAACTTGATAGCTGATG 58.802 43.478 0.00 0.00 0.00 3.07
652 653 3.285484 AGGCAAACTTGATAGCTGATGG 58.715 45.455 0.00 0.00 0.00 3.51
653 654 3.019564 GGCAAACTTGATAGCTGATGGT 58.980 45.455 0.00 0.00 0.00 3.55
654 655 3.445096 GGCAAACTTGATAGCTGATGGTT 59.555 43.478 0.00 0.00 0.00 3.67
655 656 4.082026 GGCAAACTTGATAGCTGATGGTTT 60.082 41.667 0.00 0.00 0.00 3.27
656 657 5.125417 GGCAAACTTGATAGCTGATGGTTTA 59.875 40.000 0.00 0.00 0.00 2.01
657 658 6.261118 GCAAACTTGATAGCTGATGGTTTAG 58.739 40.000 0.00 0.00 0.00 1.85
658 659 6.261118 CAAACTTGATAGCTGATGGTTTAGC 58.739 40.000 0.00 0.00 40.18 3.09
659 660 5.102953 ACTTGATAGCTGATGGTTTAGCA 57.897 39.130 0.00 0.00 42.29 3.49
660 661 5.500234 ACTTGATAGCTGATGGTTTAGCAA 58.500 37.500 0.00 0.00 42.29 3.91
661 662 5.945784 ACTTGATAGCTGATGGTTTAGCAAA 59.054 36.000 0.00 0.00 42.29 3.68
662 663 6.094603 ACTTGATAGCTGATGGTTTAGCAAAG 59.905 38.462 0.00 0.00 42.29 2.77
663 664 4.336433 TGATAGCTGATGGTTTAGCAAAGC 59.664 41.667 0.00 10.31 42.29 3.51
671 672 4.040445 TGGTTTAGCAAAGCACTGTTTC 57.960 40.909 8.71 0.00 43.27 2.78
672 673 3.445450 TGGTTTAGCAAAGCACTGTTTCA 59.555 39.130 8.71 0.00 43.27 2.69
673 674 4.044426 GGTTTAGCAAAGCACTGTTTCAG 58.956 43.478 6.11 0.00 38.68 3.02
674 675 3.354089 TTAGCAAAGCACTGTTTCAGC 57.646 42.857 0.00 0.00 34.37 4.26
675 676 1.105457 AGCAAAGCACTGTTTCAGCA 58.895 45.000 6.02 0.00 34.37 4.41
676 677 1.684983 AGCAAAGCACTGTTTCAGCAT 59.315 42.857 6.02 0.00 34.37 3.79
677 678 2.101917 AGCAAAGCACTGTTTCAGCATT 59.898 40.909 6.02 0.00 34.37 3.56
678 679 3.318839 AGCAAAGCACTGTTTCAGCATTA 59.681 39.130 6.02 0.00 34.37 1.90
679 680 3.671928 GCAAAGCACTGTTTCAGCATTAG 59.328 43.478 0.00 0.00 34.37 1.73
680 681 4.794003 GCAAAGCACTGTTTCAGCATTAGT 60.794 41.667 0.00 0.00 34.37 2.24
681 682 5.562696 GCAAAGCACTGTTTCAGCATTAGTA 60.563 40.000 0.00 0.00 34.37 1.82
682 683 6.437928 CAAAGCACTGTTTCAGCATTAGTAA 58.562 36.000 0.00 0.00 34.37 2.24
683 684 6.633500 AAGCACTGTTTCAGCATTAGTAAA 57.367 33.333 0.00 0.00 34.37 2.01
684 685 6.824305 AGCACTGTTTCAGCATTAGTAAAT 57.176 33.333 0.00 0.00 34.37 1.40
685 686 6.615088 AGCACTGTTTCAGCATTAGTAAATG 58.385 36.000 0.00 0.00 44.53 2.32
686 687 6.430925 AGCACTGTTTCAGCATTAGTAAATGA 59.569 34.615 2.38 0.00 43.59 2.57
687 688 6.744537 GCACTGTTTCAGCATTAGTAAATGAG 59.255 38.462 2.38 0.00 43.59 2.90
688 689 7.573843 GCACTGTTTCAGCATTAGTAAATGAGT 60.574 37.037 2.38 0.00 43.59 3.41
689 690 7.747799 CACTGTTTCAGCATTAGTAAATGAGTG 59.252 37.037 2.38 0.00 43.59 3.51
690 691 7.094634 ACTGTTTCAGCATTAGTAAATGAGTGG 60.095 37.037 2.38 0.00 43.59 4.00
691 692 6.150976 TGTTTCAGCATTAGTAAATGAGTGGG 59.849 38.462 2.38 0.00 44.50 4.61
692 693 5.692115 TCAGCATTAGTAAATGAGTGGGA 57.308 39.130 2.38 0.00 44.50 4.37
693 694 5.674525 TCAGCATTAGTAAATGAGTGGGAG 58.325 41.667 2.38 0.00 44.50 4.30
694 695 5.425217 TCAGCATTAGTAAATGAGTGGGAGA 59.575 40.000 2.38 0.00 44.50 3.71
695 696 5.757320 CAGCATTAGTAAATGAGTGGGAGAG 59.243 44.000 2.38 0.00 44.50 3.20
696 697 4.513318 GCATTAGTAAATGAGTGGGAGAGC 59.487 45.833 2.38 0.00 44.50 4.09
697 698 5.674525 CATTAGTAAATGAGTGGGAGAGCA 58.325 41.667 0.00 0.00 44.50 4.26
698 699 5.957771 TTAGTAAATGAGTGGGAGAGCAT 57.042 39.130 0.00 0.00 0.00 3.79
699 700 4.414337 AGTAAATGAGTGGGAGAGCATC 57.586 45.455 0.00 0.00 0.00 3.91
700 701 2.322355 AAATGAGTGGGAGAGCATCG 57.678 50.000 0.00 0.00 42.67 3.84
701 702 1.198713 AATGAGTGGGAGAGCATCGT 58.801 50.000 0.00 0.00 42.67 3.73
702 703 0.749649 ATGAGTGGGAGAGCATCGTC 59.250 55.000 0.00 0.00 42.67 4.20
703 704 1.323271 TGAGTGGGAGAGCATCGTCC 61.323 60.000 0.00 0.00 42.67 4.79
704 705 2.022240 GAGTGGGAGAGCATCGTCCC 62.022 65.000 0.02 0.02 46.43 4.46
705 706 2.060980 GTGGGAGAGCATCGTCCCT 61.061 63.158 8.83 0.00 46.41 4.20
706 707 2.060383 TGGGAGAGCATCGTCCCTG 61.060 63.158 8.83 0.00 46.41 4.45
707 708 1.758514 GGGAGAGCATCGTCCCTGA 60.759 63.158 0.00 0.00 44.33 3.86
708 709 1.118356 GGGAGAGCATCGTCCCTGAT 61.118 60.000 0.00 0.00 44.33 2.90
709 710 0.755686 GGAGAGCATCGTCCCTGATT 59.244 55.000 0.00 0.00 42.67 2.57
710 711 1.139853 GGAGAGCATCGTCCCTGATTT 59.860 52.381 0.00 0.00 42.67 2.17
711 712 2.420687 GGAGAGCATCGTCCCTGATTTT 60.421 50.000 0.00 0.00 42.67 1.82
712 713 3.181465 GGAGAGCATCGTCCCTGATTTTA 60.181 47.826 0.00 0.00 42.67 1.52
713 714 4.503991 GGAGAGCATCGTCCCTGATTTTAT 60.504 45.833 0.00 0.00 42.67 1.40
714 715 5.041191 AGAGCATCGTCCCTGATTTTATT 57.959 39.130 0.00 0.00 42.67 1.40
715 716 5.059833 AGAGCATCGTCCCTGATTTTATTC 58.940 41.667 0.00 0.00 42.67 1.75
716 717 5.041191 AGCATCGTCCCTGATTTTATTCT 57.959 39.130 0.00 0.00 0.00 2.40
717 718 5.440610 AGCATCGTCCCTGATTTTATTCTT 58.559 37.500 0.00 0.00 0.00 2.52
718 719 5.529060 AGCATCGTCCCTGATTTTATTCTTC 59.471 40.000 0.00 0.00 0.00 2.87
719 720 5.296780 GCATCGTCCCTGATTTTATTCTTCA 59.703 40.000 0.00 0.00 0.00 3.02
720 721 6.719365 CATCGTCCCTGATTTTATTCTTCAC 58.281 40.000 0.00 0.00 0.00 3.18
721 722 5.183228 TCGTCCCTGATTTTATTCTTCACC 58.817 41.667 0.00 0.00 0.00 4.02
722 723 4.941263 CGTCCCTGATTTTATTCTTCACCA 59.059 41.667 0.00 0.00 0.00 4.17
723 724 5.590259 CGTCCCTGATTTTATTCTTCACCAT 59.410 40.000 0.00 0.00 0.00 3.55
724 725 6.095440 CGTCCCTGATTTTATTCTTCACCATT 59.905 38.462 0.00 0.00 0.00 3.16
725 726 7.282224 CGTCCCTGATTTTATTCTTCACCATTA 59.718 37.037 0.00 0.00 0.00 1.90
726 727 9.136323 GTCCCTGATTTTATTCTTCACCATTAT 57.864 33.333 0.00 0.00 0.00 1.28
727 728 9.135189 TCCCTGATTTTATTCTTCACCATTATG 57.865 33.333 0.00 0.00 0.00 1.90
728 729 8.917088 CCCTGATTTTATTCTTCACCATTATGT 58.083 33.333 0.00 0.00 0.00 2.29
737 738 8.964476 ATTCTTCACCATTATGTAAACGATCT 57.036 30.769 0.00 0.00 0.00 2.75
738 739 8.786826 TTCTTCACCATTATGTAAACGATCTT 57.213 30.769 0.00 0.00 0.00 2.40
739 740 8.196802 TCTTCACCATTATGTAAACGATCTTG 57.803 34.615 0.00 0.00 0.00 3.02
740 741 6.358118 TCACCATTATGTAAACGATCTTGC 57.642 37.500 0.00 0.00 0.00 4.01
741 742 6.112734 TCACCATTATGTAAACGATCTTGCT 58.887 36.000 0.00 0.00 0.00 3.91
742 743 6.037062 TCACCATTATGTAAACGATCTTGCTG 59.963 38.462 0.00 0.00 0.00 4.41
743 744 5.880332 ACCATTATGTAAACGATCTTGCTGT 59.120 36.000 0.00 0.00 0.00 4.40
744 745 6.374333 ACCATTATGTAAACGATCTTGCTGTT 59.626 34.615 0.00 0.00 0.00 3.16
745 746 7.551262 ACCATTATGTAAACGATCTTGCTGTTA 59.449 33.333 0.00 0.00 0.00 2.41
746 747 8.559536 CCATTATGTAAACGATCTTGCTGTTAT 58.440 33.333 0.00 0.00 0.00 1.89
747 748 9.935682 CATTATGTAAACGATCTTGCTGTTATT 57.064 29.630 0.00 0.00 0.00 1.40
749 750 9.767684 TTATGTAAACGATCTTGCTGTTATTTG 57.232 29.630 0.00 0.00 0.00 2.32
750 751 7.428282 TGTAAACGATCTTGCTGTTATTTGA 57.572 32.000 0.00 0.00 0.00 2.69
751 752 7.518161 TGTAAACGATCTTGCTGTTATTTGAG 58.482 34.615 0.00 0.00 0.00 3.02
752 753 5.551760 AACGATCTTGCTGTTATTTGAGG 57.448 39.130 0.00 0.00 0.00 3.86
753 754 4.832248 ACGATCTTGCTGTTATTTGAGGA 58.168 39.130 0.00 0.00 0.00 3.71
754 755 5.245531 ACGATCTTGCTGTTATTTGAGGAA 58.754 37.500 0.00 0.00 0.00 3.36
755 756 5.882557 ACGATCTTGCTGTTATTTGAGGAAT 59.117 36.000 0.00 0.00 0.00 3.01
756 757 7.047891 ACGATCTTGCTGTTATTTGAGGAATA 58.952 34.615 0.00 0.00 0.00 1.75
757 758 7.552687 ACGATCTTGCTGTTATTTGAGGAATAA 59.447 33.333 0.00 0.00 37.76 1.40
758 759 8.562892 CGATCTTGCTGTTATTTGAGGAATAAT 58.437 33.333 0.00 0.00 41.08 1.28
759 760 9.674824 GATCTTGCTGTTATTTGAGGAATAATG 57.325 33.333 0.00 0.00 41.08 1.90
760 761 8.579850 TCTTGCTGTTATTTGAGGAATAATGT 57.420 30.769 0.00 0.00 41.08 2.71
761 762 9.023962 TCTTGCTGTTATTTGAGGAATAATGTT 57.976 29.630 0.00 0.00 41.08 2.71
816 817 0.525668 CTGATCCTACGTGGTGTCGC 60.526 60.000 0.00 0.00 37.07 5.19
1015 1017 3.519510 CTCCAGAATGTTCCCTTCTACCA 59.480 47.826 0.00 0.00 31.82 3.25
1017 1019 3.262420 CAGAATGTTCCCTTCTACCACG 58.738 50.000 0.00 0.00 31.82 4.94
1435 1437 6.655003 CAGTGACATGGTAATAAAACCTCTGT 59.345 38.462 0.00 0.00 40.44 3.41
1465 1467 6.331845 TCGCATTCAATGATTTTTAGCATGT 58.668 32.000 0.00 0.00 0.00 3.21
1530 1532 3.384789 CGGAATTCCTAGTGACAGGATCA 59.615 47.826 22.05 0.00 44.26 2.92
1558 1560 5.348451 GTGTGGTGTTTATTGAATCAATGCC 59.652 40.000 17.93 11.81 35.54 4.40
1559 1561 4.869861 GTGGTGTTTATTGAATCAATGCCC 59.130 41.667 17.93 10.36 35.54 5.36
1560 1562 4.081198 TGGTGTTTATTGAATCAATGCCCC 60.081 41.667 17.93 10.67 35.54 5.80
1561 1563 4.441792 GTGTTTATTGAATCAATGCCCCC 58.558 43.478 17.93 3.11 35.54 5.40
1583 1585 2.240162 CTCCCCAACGGTAGGACTGC 62.240 65.000 0.00 0.00 0.00 4.40
1625 1627 9.513906 TTTCCATTCAGTTAGATTCAATACACA 57.486 29.630 0.00 0.00 0.00 3.72
1626 1628 8.492673 TCCATTCAGTTAGATTCAATACACAC 57.507 34.615 0.00 0.00 0.00 3.82
1949 1983 0.336737 AAGATCGTCCCTCCCTCAGT 59.663 55.000 0.00 0.00 0.00 3.41
2052 2098 1.327690 ATGAAGCTGGCATGCCTTGG 61.328 55.000 35.53 24.95 36.94 3.61
2101 2154 1.674441 CATGAAGATTGCATCACCGCT 59.326 47.619 0.00 0.00 0.00 5.52
2205 2258 2.611518 GAGTTGATGACTAGCGCACTT 58.388 47.619 11.47 0.00 39.19 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.831868 AGTTTTACTTTTTAGGCTTGTCCAGA 59.168 34.615 0.00 0.00 37.29 3.86
1 2 6.918022 CAGTTTTACTTTTTAGGCTTGTCCAG 59.082 38.462 0.00 0.00 37.29 3.86
2 3 6.378848 ACAGTTTTACTTTTTAGGCTTGTCCA 59.621 34.615 0.00 0.00 37.29 4.02
3 4 6.802608 ACAGTTTTACTTTTTAGGCTTGTCC 58.197 36.000 0.00 0.00 0.00 4.02
4 5 6.916387 GGACAGTTTTACTTTTTAGGCTTGTC 59.084 38.462 0.00 0.00 0.00 3.18
5 6 6.605995 AGGACAGTTTTACTTTTTAGGCTTGT 59.394 34.615 0.00 0.00 0.00 3.16
6 7 7.039313 AGGACAGTTTTACTTTTTAGGCTTG 57.961 36.000 0.00 0.00 0.00 4.01
7 8 7.230108 GGTAGGACAGTTTTACTTTTTAGGCTT 59.770 37.037 0.00 0.00 0.00 4.35
8 9 6.713903 GGTAGGACAGTTTTACTTTTTAGGCT 59.286 38.462 0.00 0.00 0.00 4.58
9 10 6.487668 TGGTAGGACAGTTTTACTTTTTAGGC 59.512 38.462 0.00 0.00 0.00 3.93
10 11 8.631480 ATGGTAGGACAGTTTTACTTTTTAGG 57.369 34.615 0.00 0.00 0.00 2.69
46 47 6.499106 AATGTTTGAGAGGGTGGAATTTTT 57.501 33.333 0.00 0.00 0.00 1.94
47 48 7.610580 TTAATGTTTGAGAGGGTGGAATTTT 57.389 32.000 0.00 0.00 0.00 1.82
48 49 7.610580 TTTAATGTTTGAGAGGGTGGAATTT 57.389 32.000 0.00 0.00 0.00 1.82
49 50 7.610580 TTTTAATGTTTGAGAGGGTGGAATT 57.389 32.000 0.00 0.00 0.00 2.17
50 51 7.610580 TTTTTAATGTTTGAGAGGGTGGAAT 57.389 32.000 0.00 0.00 0.00 3.01
95 96 8.635765 TTAGTTATTGAGAGAGTGGCATTTTT 57.364 30.769 0.00 0.00 0.00 1.94
96 97 8.635765 TTTAGTTATTGAGAGAGTGGCATTTT 57.364 30.769 0.00 0.00 0.00 1.82
97 98 8.635765 TTTTAGTTATTGAGAGAGTGGCATTT 57.364 30.769 0.00 0.00 0.00 2.32
98 99 8.680903 CATTTTAGTTATTGAGAGAGTGGCATT 58.319 33.333 0.00 0.00 0.00 3.56
99 100 8.049117 TCATTTTAGTTATTGAGAGAGTGGCAT 58.951 33.333 0.00 0.00 0.00 4.40
100 101 7.334421 GTCATTTTAGTTATTGAGAGAGTGGCA 59.666 37.037 0.00 0.00 0.00 4.92
101 102 7.334421 TGTCATTTTAGTTATTGAGAGAGTGGC 59.666 37.037 0.00 0.00 0.00 5.01
102 103 8.777865 TGTCATTTTAGTTATTGAGAGAGTGG 57.222 34.615 0.00 0.00 0.00 4.00
104 105 9.606631 GGATGTCATTTTAGTTATTGAGAGAGT 57.393 33.333 0.00 0.00 0.00 3.24
105 106 9.829507 AGGATGTCATTTTAGTTATTGAGAGAG 57.170 33.333 0.00 0.00 0.00 3.20
162 163 9.019764 GCGTGATTAAGTGCATGTAATTTTTAT 57.980 29.630 0.95 0.00 0.00 1.40
163 164 7.486551 GGCGTGATTAAGTGCATGTAATTTTTA 59.513 33.333 0.95 0.00 0.00 1.52
164 165 6.310224 GGCGTGATTAAGTGCATGTAATTTTT 59.690 34.615 0.95 0.00 0.00 1.94
165 166 5.804979 GGCGTGATTAAGTGCATGTAATTTT 59.195 36.000 0.95 0.00 0.00 1.82
166 167 5.105957 TGGCGTGATTAAGTGCATGTAATTT 60.106 36.000 0.95 0.00 0.00 1.82
167 168 4.397730 TGGCGTGATTAAGTGCATGTAATT 59.602 37.500 1.40 1.40 0.00 1.40
168 169 3.944650 TGGCGTGATTAAGTGCATGTAAT 59.055 39.130 4.91 4.91 0.00 1.89
169 170 3.339141 TGGCGTGATTAAGTGCATGTAA 58.661 40.909 0.00 0.00 0.00 2.41
170 171 2.979240 TGGCGTGATTAAGTGCATGTA 58.021 42.857 0.00 0.00 0.00 2.29
171 172 1.819928 TGGCGTGATTAAGTGCATGT 58.180 45.000 0.00 0.00 0.00 3.21
172 173 4.550577 TTATGGCGTGATTAAGTGCATG 57.449 40.909 0.00 0.00 0.00 4.06
173 174 5.574891 TTTTATGGCGTGATTAAGTGCAT 57.425 34.783 0.00 0.00 0.00 3.96
174 175 5.378292 TTTTTATGGCGTGATTAAGTGCA 57.622 34.783 0.00 0.00 0.00 4.57
175 176 7.979115 TTATTTTTATGGCGTGATTAAGTGC 57.021 32.000 0.00 0.00 0.00 4.40
180 181 8.821894 GGCATTTTTATTTTTATGGCGTGATTA 58.178 29.630 0.00 0.00 34.54 1.75
181 182 7.335422 TGGCATTTTTATTTTTATGGCGTGATT 59.665 29.630 0.00 0.00 43.96 2.57
182 183 6.820656 TGGCATTTTTATTTTTATGGCGTGAT 59.179 30.769 0.00 0.00 43.96 3.06
183 184 6.166279 TGGCATTTTTATTTTTATGGCGTGA 58.834 32.000 0.00 0.00 43.96 4.35
184 185 6.414408 TGGCATTTTTATTTTTATGGCGTG 57.586 33.333 0.00 0.00 43.96 5.34
185 186 7.047271 AGATGGCATTTTTATTTTTATGGCGT 58.953 30.769 0.00 0.00 43.96 5.68
186 187 7.439056 AGAGATGGCATTTTTATTTTTATGGCG 59.561 33.333 0.00 0.00 43.96 5.69
187 188 8.667076 AGAGATGGCATTTTTATTTTTATGGC 57.333 30.769 0.00 0.00 42.10 4.40
188 189 9.820725 TGAGAGATGGCATTTTTATTTTTATGG 57.179 29.630 0.00 0.00 0.00 2.74
203 204 9.353431 TGCTATTTTTATTATTGAGAGATGGCA 57.647 29.630 0.00 0.00 0.00 4.92
252 253 9.270640 GGCATGGCAATTTTATTAACAATATGA 57.729 29.630 15.47 0.00 0.00 2.15
253 254 9.053840 TGGCATGGCAATTTTATTAACAATATG 57.946 29.630 21.13 0.00 0.00 1.78
254 255 9.796180 ATGGCATGGCAATTTTATTAACAATAT 57.204 25.926 27.04 0.00 0.00 1.28
255 256 9.624373 AATGGCATGGCAATTTTATTAACAATA 57.376 25.926 27.04 0.00 25.78 1.90
256 257 8.522542 AATGGCATGGCAATTTTATTAACAAT 57.477 26.923 27.04 0.78 25.78 2.71
257 258 7.934855 AATGGCATGGCAATTTTATTAACAA 57.065 28.000 27.04 0.00 25.78 2.83
258 259 9.453572 TTTAATGGCATGGCAATTTTATTAACA 57.546 25.926 27.04 11.96 33.79 2.41
360 361 5.903198 TCAACCCCAAAATCCTGATTTTT 57.097 34.783 13.69 0.00 45.67 1.94
362 363 5.903198 TTTCAACCCCAAAATCCTGATTT 57.097 34.783 0.00 0.00 42.35 2.17
363 364 5.903198 TTTTCAACCCCAAAATCCTGATT 57.097 34.783 0.00 0.00 0.00 2.57
364 365 5.903198 TTTTTCAACCCCAAAATCCTGAT 57.097 34.783 0.00 0.00 0.00 2.90
365 366 5.903198 ATTTTTCAACCCCAAAATCCTGA 57.097 34.783 0.00 0.00 28.34 3.86
370 371 9.791801 GGCATATATATTTTTCAACCCCAAAAT 57.208 29.630 0.00 0.00 36.69 1.82
371 372 8.772250 TGGCATATATATTTTTCAACCCCAAAA 58.228 29.630 0.00 0.00 0.00 2.44
372 373 8.324191 TGGCATATATATTTTTCAACCCCAAA 57.676 30.769 0.00 0.00 0.00 3.28
373 374 7.921041 TGGCATATATATTTTTCAACCCCAA 57.079 32.000 0.00 0.00 0.00 4.12
374 375 7.955185 AGATGGCATATATATTTTTCAACCCCA 59.045 33.333 0.00 0.00 0.00 4.96
375 376 8.366359 AGATGGCATATATATTTTTCAACCCC 57.634 34.615 0.00 0.00 0.00 4.95
385 386 9.806448 TGGTGTGTTTAAGATGGCATATATATT 57.194 29.630 0.00 0.00 0.00 1.28
386 387 9.453572 CTGGTGTGTTTAAGATGGCATATATAT 57.546 33.333 0.00 0.00 0.00 0.86
387 388 8.655901 TCTGGTGTGTTTAAGATGGCATATATA 58.344 33.333 0.00 0.00 0.00 0.86
388 389 7.517320 TCTGGTGTGTTTAAGATGGCATATAT 58.483 34.615 0.00 0.00 0.00 0.86
389 390 6.894682 TCTGGTGTGTTTAAGATGGCATATA 58.105 36.000 0.00 0.00 0.00 0.86
390 391 5.754782 TCTGGTGTGTTTAAGATGGCATAT 58.245 37.500 0.00 0.00 0.00 1.78
391 392 5.172687 TCTGGTGTGTTTAAGATGGCATA 57.827 39.130 0.00 0.00 0.00 3.14
392 393 4.032960 TCTGGTGTGTTTAAGATGGCAT 57.967 40.909 0.00 0.00 0.00 4.40
393 394 3.500448 TCTGGTGTGTTTAAGATGGCA 57.500 42.857 0.00 0.00 0.00 4.92
394 395 4.458989 TGAATCTGGTGTGTTTAAGATGGC 59.541 41.667 0.00 0.00 29.93 4.40
395 396 5.473162 TGTGAATCTGGTGTGTTTAAGATGG 59.527 40.000 0.00 0.00 29.93 3.51
396 397 6.558771 TGTGAATCTGGTGTGTTTAAGATG 57.441 37.500 0.00 0.00 29.93 2.90
397 398 7.581213 TTTGTGAATCTGGTGTGTTTAAGAT 57.419 32.000 0.00 0.00 0.00 2.40
398 399 7.397892 TTTTGTGAATCTGGTGTGTTTAAGA 57.602 32.000 0.00 0.00 0.00 2.10
399 400 6.697019 CCTTTTGTGAATCTGGTGTGTTTAAG 59.303 38.462 0.00 0.00 0.00 1.85
400 401 6.568869 CCTTTTGTGAATCTGGTGTGTTTAA 58.431 36.000 0.00 0.00 0.00 1.52
401 402 5.451242 GCCTTTTGTGAATCTGGTGTGTTTA 60.451 40.000 0.00 0.00 0.00 2.01
402 403 4.680440 GCCTTTTGTGAATCTGGTGTGTTT 60.680 41.667 0.00 0.00 0.00 2.83
403 404 3.181476 GCCTTTTGTGAATCTGGTGTGTT 60.181 43.478 0.00 0.00 0.00 3.32
404 405 2.362077 GCCTTTTGTGAATCTGGTGTGT 59.638 45.455 0.00 0.00 0.00 3.72
405 406 2.288395 GGCCTTTTGTGAATCTGGTGTG 60.288 50.000 0.00 0.00 0.00 3.82
406 407 1.963515 GGCCTTTTGTGAATCTGGTGT 59.036 47.619 0.00 0.00 0.00 4.16
407 408 1.273327 GGGCCTTTTGTGAATCTGGTG 59.727 52.381 0.84 0.00 0.00 4.17
408 409 1.147817 AGGGCCTTTTGTGAATCTGGT 59.852 47.619 0.00 0.00 0.00 4.00
409 410 1.821136 GAGGGCCTTTTGTGAATCTGG 59.179 52.381 7.89 0.00 0.00 3.86
410 411 2.751806 GAGAGGGCCTTTTGTGAATCTG 59.248 50.000 7.89 0.00 0.00 2.90
411 412 2.376518 TGAGAGGGCCTTTTGTGAATCT 59.623 45.455 7.89 0.00 0.00 2.40
412 413 2.751806 CTGAGAGGGCCTTTTGTGAATC 59.248 50.000 7.89 0.00 0.00 2.52
413 414 2.800250 CTGAGAGGGCCTTTTGTGAAT 58.200 47.619 7.89 0.00 0.00 2.57
414 415 1.819305 GCTGAGAGGGCCTTTTGTGAA 60.819 52.381 7.89 0.00 0.00 3.18
415 416 0.250901 GCTGAGAGGGCCTTTTGTGA 60.251 55.000 7.89 0.00 0.00 3.58
416 417 1.246737 GGCTGAGAGGGCCTTTTGTG 61.247 60.000 7.89 0.00 45.57 3.33
417 418 1.075659 GGCTGAGAGGGCCTTTTGT 59.924 57.895 7.89 0.00 45.57 2.83
418 419 4.009015 GGCTGAGAGGGCCTTTTG 57.991 61.111 7.89 0.12 45.57 2.44
424 425 2.373707 ATCACTGGGCTGAGAGGGC 61.374 63.158 0.00 0.00 0.00 5.19
425 426 1.525923 CATCACTGGGCTGAGAGGG 59.474 63.158 0.00 0.00 0.00 4.30
426 427 1.153208 GCATCACTGGGCTGAGAGG 60.153 63.158 0.00 0.00 0.00 3.69
427 428 0.179078 GAGCATCACTGGGCTGAGAG 60.179 60.000 0.00 0.00 41.22 3.20
428 429 1.903294 GAGCATCACTGGGCTGAGA 59.097 57.895 0.00 0.00 41.22 3.27
429 430 1.521010 CGAGCATCACTGGGCTGAG 60.521 63.158 0.00 0.00 41.22 3.35
430 431 2.580815 CGAGCATCACTGGGCTGA 59.419 61.111 0.00 0.00 41.22 4.26
431 432 2.513204 CCGAGCATCACTGGGCTG 60.513 66.667 0.00 0.00 41.22 4.85
435 436 0.179100 ATCGAACCGAGCATCACTGG 60.179 55.000 0.00 0.00 39.91 4.00
436 437 1.203928 GATCGAACCGAGCATCACTG 58.796 55.000 0.00 0.00 42.09 3.66
437 438 0.103208 GGATCGAACCGAGCATCACT 59.897 55.000 6.93 0.00 44.41 3.41
438 439 0.876342 GGGATCGAACCGAGCATCAC 60.876 60.000 5.55 0.00 44.41 3.06
439 440 1.441729 GGGATCGAACCGAGCATCA 59.558 57.895 5.55 0.00 44.41 3.07
440 441 1.301009 GGGGATCGAACCGAGCATC 60.301 63.158 5.55 0.00 44.41 3.91
441 442 1.749334 GAGGGGATCGAACCGAGCAT 61.749 60.000 5.55 0.00 44.41 3.79
442 443 2.363795 AGGGGATCGAACCGAGCA 60.364 61.111 5.55 0.00 44.41 4.26
443 444 2.417936 GAGGGGATCGAACCGAGC 59.582 66.667 5.55 0.00 41.76 5.03
452 453 2.833582 TCGTGAGGCGAGGGGATC 60.834 66.667 0.00 0.00 45.68 3.36
460 461 4.737765 TCTTTTTCAAAAATTCGTGAGGCG 59.262 37.500 0.00 0.00 43.01 5.52
461 462 6.582437 TTCTTTTTCAAAAATTCGTGAGGC 57.418 33.333 0.00 0.00 0.00 4.70
462 463 9.261318 GTTTTTCTTTTTCAAAAATTCGTGAGG 57.739 29.630 0.00 0.00 35.67 3.86
463 464 9.261318 GGTTTTTCTTTTTCAAAAATTCGTGAG 57.739 29.630 0.00 0.00 35.67 3.51
464 465 8.774586 TGGTTTTTCTTTTTCAAAAATTCGTGA 58.225 25.926 0.00 0.00 35.67 4.35
465 466 8.836109 GTGGTTTTTCTTTTTCAAAAATTCGTG 58.164 29.630 0.00 0.00 35.67 4.35
466 467 7.742525 CGTGGTTTTTCTTTTTCAAAAATTCGT 59.257 29.630 0.00 0.00 35.67 3.85
467 468 7.252833 GCGTGGTTTTTCTTTTTCAAAAATTCG 60.253 33.333 0.00 0.00 35.67 3.34
468 469 7.252833 CGCGTGGTTTTTCTTTTTCAAAAATTC 60.253 33.333 0.00 0.00 35.67 2.17
469 470 6.521477 CGCGTGGTTTTTCTTTTTCAAAAATT 59.479 30.769 0.00 0.00 35.67 1.82
470 471 6.018542 CGCGTGGTTTTTCTTTTTCAAAAAT 58.981 32.000 0.00 0.00 35.67 1.82
471 472 5.050295 ACGCGTGGTTTTTCTTTTTCAAAAA 60.050 32.000 12.93 0.00 31.70 1.94
472 473 4.448060 ACGCGTGGTTTTTCTTTTTCAAAA 59.552 33.333 12.93 0.00 0.00 2.44
473 474 3.988517 ACGCGTGGTTTTTCTTTTTCAAA 59.011 34.783 12.93 0.00 0.00 2.69
474 475 3.576648 ACGCGTGGTTTTTCTTTTTCAA 58.423 36.364 12.93 0.00 0.00 2.69
475 476 3.172824 GACGCGTGGTTTTTCTTTTTCA 58.827 40.909 20.70 0.00 0.00 2.69
476 477 2.532723 GGACGCGTGGTTTTTCTTTTTC 59.467 45.455 20.70 0.00 0.00 2.29
477 478 2.094649 TGGACGCGTGGTTTTTCTTTTT 60.095 40.909 20.70 0.00 0.00 1.94
478 479 1.473278 TGGACGCGTGGTTTTTCTTTT 59.527 42.857 20.70 0.00 0.00 2.27
479 480 1.096416 TGGACGCGTGGTTTTTCTTT 58.904 45.000 20.70 0.00 0.00 2.52
480 481 0.379316 GTGGACGCGTGGTTTTTCTT 59.621 50.000 20.70 0.00 0.00 2.52
481 482 1.441732 GGTGGACGCGTGGTTTTTCT 61.442 55.000 20.70 0.00 0.00 2.52
482 483 1.009335 GGTGGACGCGTGGTTTTTC 60.009 57.895 20.70 0.00 0.00 2.29
483 484 2.825975 CGGTGGACGCGTGGTTTTT 61.826 57.895 20.70 0.00 34.82 1.94
484 485 3.273834 CGGTGGACGCGTGGTTTT 61.274 61.111 20.70 0.00 34.82 2.43
485 486 3.736732 TTCGGTGGACGCGTGGTTT 62.737 57.895 20.70 0.00 43.86 3.27
486 487 3.736732 TTTCGGTGGACGCGTGGTT 62.737 57.895 20.70 0.00 43.86 3.67
487 488 4.224274 TTTCGGTGGACGCGTGGT 62.224 61.111 20.70 0.00 43.86 4.16
488 489 3.411351 CTTTCGGTGGACGCGTGG 61.411 66.667 20.70 0.00 43.86 4.94
489 490 4.072088 GCTTTCGGTGGACGCGTG 62.072 66.667 20.70 0.43 43.86 5.34
490 491 3.876589 ATGCTTTCGGTGGACGCGT 62.877 57.895 13.85 13.85 43.86 6.01
491 492 3.083600 GATGCTTTCGGTGGACGCG 62.084 63.158 3.53 3.53 43.86 6.01
492 493 1.741770 AGATGCTTTCGGTGGACGC 60.742 57.895 0.00 0.00 43.86 5.19
493 494 0.389817 TCAGATGCTTTCGGTGGACG 60.390 55.000 0.00 0.00 46.11 4.79
494 495 1.464997 GTTCAGATGCTTTCGGTGGAC 59.535 52.381 0.00 0.00 0.00 4.02
495 496 1.071542 TGTTCAGATGCTTTCGGTGGA 59.928 47.619 0.00 0.00 0.00 4.02
496 497 1.522668 TGTTCAGATGCTTTCGGTGG 58.477 50.000 0.00 0.00 0.00 4.61
497 498 2.290367 TGTTGTTCAGATGCTTTCGGTG 59.710 45.455 0.00 0.00 0.00 4.94
498 499 2.571212 TGTTGTTCAGATGCTTTCGGT 58.429 42.857 0.00 0.00 0.00 4.69
499 500 3.624326 TTGTTGTTCAGATGCTTTCGG 57.376 42.857 0.00 0.00 0.00 4.30
500 501 3.730715 GGTTTGTTGTTCAGATGCTTTCG 59.269 43.478 0.00 0.00 0.00 3.46
501 502 4.504097 GTGGTTTGTTGTTCAGATGCTTTC 59.496 41.667 0.00 0.00 0.00 2.62
502 503 4.081752 TGTGGTTTGTTGTTCAGATGCTTT 60.082 37.500 0.00 0.00 0.00 3.51
503 504 3.446873 TGTGGTTTGTTGTTCAGATGCTT 59.553 39.130 0.00 0.00 0.00 3.91
504 505 3.023119 TGTGGTTTGTTGTTCAGATGCT 58.977 40.909 0.00 0.00 0.00 3.79
505 506 3.115554 GTGTGGTTTGTTGTTCAGATGC 58.884 45.455 0.00 0.00 0.00 3.91
506 507 3.130164 TGGTGTGGTTTGTTGTTCAGATG 59.870 43.478 0.00 0.00 0.00 2.90
507 508 3.360867 TGGTGTGGTTTGTTGTTCAGAT 58.639 40.909 0.00 0.00 0.00 2.90
508 509 2.752354 CTGGTGTGGTTTGTTGTTCAGA 59.248 45.455 0.00 0.00 0.00 3.27
509 510 2.491693 ACTGGTGTGGTTTGTTGTTCAG 59.508 45.455 0.00 0.00 0.00 3.02
510 511 2.230025 CACTGGTGTGGTTTGTTGTTCA 59.770 45.455 0.00 0.00 40.33 3.18
511 512 2.490115 TCACTGGTGTGGTTTGTTGTTC 59.510 45.455 0.53 0.00 43.94 3.18
512 513 2.520069 TCACTGGTGTGGTTTGTTGTT 58.480 42.857 0.53 0.00 43.94 2.83
513 514 2.208132 TCACTGGTGTGGTTTGTTGT 57.792 45.000 0.53 0.00 43.94 3.32
514 515 2.034558 GGATCACTGGTGTGGTTTGTTG 59.965 50.000 0.00 0.00 43.94 3.33
515 516 2.091885 AGGATCACTGGTGTGGTTTGTT 60.092 45.455 0.00 0.00 43.94 2.83
516 517 1.494721 AGGATCACTGGTGTGGTTTGT 59.505 47.619 0.00 0.00 43.94 2.83
517 518 2.276732 AGGATCACTGGTGTGGTTTG 57.723 50.000 0.00 0.00 43.94 2.93
518 519 4.335416 CATTAGGATCACTGGTGTGGTTT 58.665 43.478 0.00 0.00 43.94 3.27
519 520 3.873801 GCATTAGGATCACTGGTGTGGTT 60.874 47.826 0.00 0.00 43.94 3.67
520 521 2.356125 GCATTAGGATCACTGGTGTGGT 60.356 50.000 0.00 0.00 43.94 4.16
521 522 2.292267 GCATTAGGATCACTGGTGTGG 58.708 52.381 0.00 0.00 43.94 4.17
522 523 2.092753 AGGCATTAGGATCACTGGTGTG 60.093 50.000 0.00 0.00 45.07 3.82
523 524 2.200081 AGGCATTAGGATCACTGGTGT 58.800 47.619 0.00 0.00 0.00 4.16
524 525 3.134623 TGTAGGCATTAGGATCACTGGTG 59.865 47.826 0.00 0.00 0.00 4.17
525 526 3.384168 TGTAGGCATTAGGATCACTGGT 58.616 45.455 0.00 0.00 0.00 4.00
526 527 4.321718 CATGTAGGCATTAGGATCACTGG 58.678 47.826 0.00 0.00 31.99 4.00
527 528 4.321718 CCATGTAGGCATTAGGATCACTG 58.678 47.826 0.00 0.00 31.99 3.66
528 529 3.328931 CCCATGTAGGCATTAGGATCACT 59.671 47.826 0.00 0.00 35.39 3.41
529 530 3.327757 TCCCATGTAGGCATTAGGATCAC 59.672 47.826 0.00 0.00 32.77 3.06
530 531 3.584406 CTCCCATGTAGGCATTAGGATCA 59.416 47.826 0.00 0.00 35.55 2.92
531 532 3.584848 ACTCCCATGTAGGCATTAGGATC 59.415 47.826 0.00 0.00 35.55 3.36
532 533 3.328931 CACTCCCATGTAGGCATTAGGAT 59.671 47.826 0.00 0.00 35.55 3.24
533 534 2.705658 CACTCCCATGTAGGCATTAGGA 59.294 50.000 0.00 0.00 35.10 2.94
534 535 2.224621 CCACTCCCATGTAGGCATTAGG 60.225 54.545 0.00 0.00 35.39 2.69
535 536 2.705658 TCCACTCCCATGTAGGCATTAG 59.294 50.000 0.00 0.00 35.39 1.73
536 537 2.438021 GTCCACTCCCATGTAGGCATTA 59.562 50.000 0.00 0.00 35.39 1.90
537 538 1.212935 GTCCACTCCCATGTAGGCATT 59.787 52.381 0.00 0.00 35.39 3.56
538 539 0.839946 GTCCACTCCCATGTAGGCAT 59.160 55.000 0.00 0.00 35.39 4.40
539 540 1.613317 CGTCCACTCCCATGTAGGCA 61.613 60.000 0.00 0.00 35.39 4.75
540 541 1.144057 CGTCCACTCCCATGTAGGC 59.856 63.158 0.00 0.00 35.39 3.93
541 542 0.460311 GACGTCCACTCCCATGTAGG 59.540 60.000 3.51 0.00 37.03 3.18
542 543 0.460311 GGACGTCCACTCCCATGTAG 59.540 60.000 29.75 0.00 35.64 2.74
543 544 0.974010 GGGACGTCCACTCCCATGTA 60.974 60.000 34.40 0.00 46.30 2.29
544 545 2.291043 GGGACGTCCACTCCCATGT 61.291 63.158 34.40 0.00 46.30 3.21
545 546 2.584608 GGGACGTCCACTCCCATG 59.415 66.667 34.40 0.00 46.30 3.66
553 554 1.138859 CTGCTATGATTGGGACGTCCA 59.861 52.381 34.40 17.10 45.43 4.02
554 555 1.412710 TCTGCTATGATTGGGACGTCC 59.587 52.381 27.04 27.04 0.00 4.79
555 556 2.890808 TCTGCTATGATTGGGACGTC 57.109 50.000 7.13 7.13 0.00 4.34
556 557 3.470709 CATTCTGCTATGATTGGGACGT 58.529 45.455 0.00 0.00 0.00 4.34
557 558 2.225019 GCATTCTGCTATGATTGGGACG 59.775 50.000 0.00 0.00 40.96 4.79
558 559 3.911661 GCATTCTGCTATGATTGGGAC 57.088 47.619 0.00 0.00 40.96 4.46
570 571 1.307097 GACATGAGGGAGCATTCTGC 58.693 55.000 0.00 0.00 45.46 4.26
571 572 2.704464 TGACATGAGGGAGCATTCTG 57.296 50.000 0.00 0.00 0.00 3.02
572 573 3.552875 CATTGACATGAGGGAGCATTCT 58.447 45.455 0.00 0.00 31.07 2.40
573 574 2.621998 CCATTGACATGAGGGAGCATTC 59.378 50.000 0.00 0.00 31.07 2.67
574 575 2.242965 TCCATTGACATGAGGGAGCATT 59.757 45.455 0.00 0.00 31.07 3.56
575 576 1.848388 TCCATTGACATGAGGGAGCAT 59.152 47.619 0.00 0.00 31.07 3.79
576 577 1.288188 TCCATTGACATGAGGGAGCA 58.712 50.000 0.00 0.00 31.07 4.26
577 578 2.653234 ATCCATTGACATGAGGGAGC 57.347 50.000 0.00 0.00 31.07 4.70
578 579 4.458295 GCATAATCCATTGACATGAGGGAG 59.542 45.833 0.00 0.00 31.07 4.30
579 580 4.105217 AGCATAATCCATTGACATGAGGGA 59.895 41.667 0.00 0.00 31.07 4.20
580 581 4.404640 AGCATAATCCATTGACATGAGGG 58.595 43.478 0.00 0.00 31.07 4.30
581 582 5.768662 AGAAGCATAATCCATTGACATGAGG 59.231 40.000 0.00 0.00 31.07 3.86
582 583 6.879276 AGAAGCATAATCCATTGACATGAG 57.121 37.500 0.00 0.00 31.07 2.90
583 584 8.158789 TGATAGAAGCATAATCCATTGACATGA 58.841 33.333 0.00 0.00 31.07 3.07
584 585 8.331730 TGATAGAAGCATAATCCATTGACATG 57.668 34.615 0.00 0.00 0.00 3.21
585 586 8.162085 ACTGATAGAAGCATAATCCATTGACAT 58.838 33.333 0.00 0.00 0.00 3.06
586 587 7.512130 ACTGATAGAAGCATAATCCATTGACA 58.488 34.615 0.00 0.00 0.00 3.58
587 588 7.976135 ACTGATAGAAGCATAATCCATTGAC 57.024 36.000 0.00 0.00 0.00 3.18
588 589 8.985315 AAACTGATAGAAGCATAATCCATTGA 57.015 30.769 0.00 0.00 0.00 2.57
589 590 9.459640 CAAAACTGATAGAAGCATAATCCATTG 57.540 33.333 0.00 0.00 0.00 2.82
590 591 9.412460 TCAAAACTGATAGAAGCATAATCCATT 57.588 29.630 0.00 0.00 0.00 3.16
591 592 8.985315 TCAAAACTGATAGAAGCATAATCCAT 57.015 30.769 0.00 0.00 0.00 3.41
592 593 8.985315 ATCAAAACTGATAGAAGCATAATCCA 57.015 30.769 0.00 0.00 0.00 3.41
608 609 8.821894 GCCTCTCTACTACAATAATCAAAACTG 58.178 37.037 0.00 0.00 0.00 3.16
609 610 8.540388 TGCCTCTCTACTACAATAATCAAAACT 58.460 33.333 0.00 0.00 0.00 2.66
610 611 8.718102 TGCCTCTCTACTACAATAATCAAAAC 57.282 34.615 0.00 0.00 0.00 2.43
611 612 9.733556 TTTGCCTCTCTACTACAATAATCAAAA 57.266 29.630 0.00 0.00 0.00 2.44
612 613 9.162764 GTTTGCCTCTCTACTACAATAATCAAA 57.837 33.333 0.00 0.00 0.00 2.69
613 614 8.540388 AGTTTGCCTCTCTACTACAATAATCAA 58.460 33.333 0.00 0.00 0.00 2.57
614 615 8.079211 AGTTTGCCTCTCTACTACAATAATCA 57.921 34.615 0.00 0.00 0.00 2.57
615 616 8.821894 CAAGTTTGCCTCTCTACTACAATAATC 58.178 37.037 0.00 0.00 0.00 1.75
616 617 8.540388 TCAAGTTTGCCTCTCTACTACAATAAT 58.460 33.333 0.00 0.00 0.00 1.28
617 618 7.903145 TCAAGTTTGCCTCTCTACTACAATAA 58.097 34.615 0.00 0.00 0.00 1.40
618 619 7.476540 TCAAGTTTGCCTCTCTACTACAATA 57.523 36.000 0.00 0.00 0.00 1.90
619 620 6.360370 TCAAGTTTGCCTCTCTACTACAAT 57.640 37.500 0.00 0.00 0.00 2.71
620 621 5.801531 TCAAGTTTGCCTCTCTACTACAA 57.198 39.130 0.00 0.00 0.00 2.41
621 622 6.405953 GCTATCAAGTTTGCCTCTCTACTACA 60.406 42.308 0.00 0.00 0.00 2.74
622 623 5.980715 GCTATCAAGTTTGCCTCTCTACTAC 59.019 44.000 0.00 0.00 0.00 2.73
623 624 5.894393 AGCTATCAAGTTTGCCTCTCTACTA 59.106 40.000 0.00 0.00 0.00 1.82
624 625 4.714308 AGCTATCAAGTTTGCCTCTCTACT 59.286 41.667 0.00 0.00 0.00 2.57
625 626 4.808364 CAGCTATCAAGTTTGCCTCTCTAC 59.192 45.833 0.00 0.00 0.00 2.59
626 627 4.711846 TCAGCTATCAAGTTTGCCTCTCTA 59.288 41.667 0.00 0.00 0.00 2.43
627 628 3.517100 TCAGCTATCAAGTTTGCCTCTCT 59.483 43.478 0.00 0.00 0.00 3.10
628 629 3.866651 TCAGCTATCAAGTTTGCCTCTC 58.133 45.455 0.00 0.00 0.00 3.20
629 630 3.988976 TCAGCTATCAAGTTTGCCTCT 57.011 42.857 0.00 0.00 0.00 3.69
630 631 3.314635 CCATCAGCTATCAAGTTTGCCTC 59.685 47.826 0.00 0.00 0.00 4.70
631 632 3.285484 CCATCAGCTATCAAGTTTGCCT 58.715 45.455 0.00 0.00 0.00 4.75
632 633 3.019564 ACCATCAGCTATCAAGTTTGCC 58.980 45.455 0.00 0.00 0.00 4.52
633 634 4.708726 AACCATCAGCTATCAAGTTTGC 57.291 40.909 0.00 0.00 0.00 3.68
634 635 6.127925 TGCTAAACCATCAGCTATCAAGTTTG 60.128 38.462 9.88 0.00 38.63 2.93
635 636 5.945784 TGCTAAACCATCAGCTATCAAGTTT 59.054 36.000 0.00 0.00 38.63 2.66
636 637 5.500234 TGCTAAACCATCAGCTATCAAGTT 58.500 37.500 0.00 0.00 38.63 2.66
637 638 5.102953 TGCTAAACCATCAGCTATCAAGT 57.897 39.130 0.00 0.00 38.63 3.16
638 639 6.441093 TTTGCTAAACCATCAGCTATCAAG 57.559 37.500 0.00 0.00 38.63 3.02
639 640 5.163622 GCTTTGCTAAACCATCAGCTATCAA 60.164 40.000 0.00 0.00 38.63 2.57
640 641 4.336433 GCTTTGCTAAACCATCAGCTATCA 59.664 41.667 0.00 0.00 38.63 2.15
641 642 4.336433 TGCTTTGCTAAACCATCAGCTATC 59.664 41.667 0.00 0.00 38.63 2.08
642 643 4.096984 GTGCTTTGCTAAACCATCAGCTAT 59.903 41.667 0.00 0.00 38.63 2.97
643 644 3.440173 GTGCTTTGCTAAACCATCAGCTA 59.560 43.478 0.00 0.00 38.63 3.32
644 645 2.229784 GTGCTTTGCTAAACCATCAGCT 59.770 45.455 0.00 0.00 38.63 4.24
645 646 2.229784 AGTGCTTTGCTAAACCATCAGC 59.770 45.455 0.00 0.00 38.31 4.26
646 647 3.254166 ACAGTGCTTTGCTAAACCATCAG 59.746 43.478 0.00 0.00 0.00 2.90
647 648 3.221771 ACAGTGCTTTGCTAAACCATCA 58.778 40.909 0.00 0.00 0.00 3.07
648 649 3.923017 ACAGTGCTTTGCTAAACCATC 57.077 42.857 0.00 0.00 0.00 3.51
649 650 4.099266 TGAAACAGTGCTTTGCTAAACCAT 59.901 37.500 0.00 0.00 0.00 3.55
650 651 3.445450 TGAAACAGTGCTTTGCTAAACCA 59.555 39.130 0.00 0.00 0.00 3.67
651 652 4.040445 TGAAACAGTGCTTTGCTAAACC 57.960 40.909 0.00 0.00 0.00 3.27
652 653 3.487207 GCTGAAACAGTGCTTTGCTAAAC 59.513 43.478 0.00 0.00 33.43 2.01
653 654 3.130164 TGCTGAAACAGTGCTTTGCTAAA 59.870 39.130 0.00 0.00 33.43 1.85
654 655 2.687425 TGCTGAAACAGTGCTTTGCTAA 59.313 40.909 0.00 0.00 33.43 3.09
655 656 2.296792 TGCTGAAACAGTGCTTTGCTA 58.703 42.857 0.00 0.00 33.43 3.49
656 657 1.105457 TGCTGAAACAGTGCTTTGCT 58.895 45.000 0.00 0.00 33.43 3.91
657 658 2.144482 ATGCTGAAACAGTGCTTTGC 57.856 45.000 0.00 0.00 33.43 3.68
658 659 4.863491 ACTAATGCTGAAACAGTGCTTTG 58.137 39.130 0.00 0.00 33.43 2.77
659 660 6.633500 TTACTAATGCTGAAACAGTGCTTT 57.367 33.333 0.00 0.00 33.43 3.51
660 661 6.633500 TTTACTAATGCTGAAACAGTGCTT 57.367 33.333 0.00 0.00 33.43 3.91
661 662 6.430925 TCATTTACTAATGCTGAAACAGTGCT 59.569 34.615 0.00 0.00 40.78 4.40
662 663 6.611381 TCATTTACTAATGCTGAAACAGTGC 58.389 36.000 0.00 0.00 40.78 4.40
663 664 7.747799 CACTCATTTACTAATGCTGAAACAGTG 59.252 37.037 0.00 0.00 40.78 3.66
664 665 7.094634 CCACTCATTTACTAATGCTGAAACAGT 60.095 37.037 0.00 0.00 40.78 3.55
665 666 7.246311 CCACTCATTTACTAATGCTGAAACAG 58.754 38.462 0.00 0.00 40.78 3.16
666 667 6.150976 CCCACTCATTTACTAATGCTGAAACA 59.849 38.462 0.00 0.00 40.78 2.83
667 668 6.374333 TCCCACTCATTTACTAATGCTGAAAC 59.626 38.462 0.00 0.00 40.78 2.78
668 669 6.480763 TCCCACTCATTTACTAATGCTGAAA 58.519 36.000 0.00 0.00 40.78 2.69
669 670 6.061022 TCCCACTCATTTACTAATGCTGAA 57.939 37.500 0.00 0.00 40.78 3.02
670 671 5.425217 TCTCCCACTCATTTACTAATGCTGA 59.575 40.000 0.00 0.00 40.78 4.26
671 672 5.674525 TCTCCCACTCATTTACTAATGCTG 58.325 41.667 0.00 0.00 40.78 4.41
672 673 5.686124 GCTCTCCCACTCATTTACTAATGCT 60.686 44.000 0.00 0.00 40.78 3.79
673 674 4.513318 GCTCTCCCACTCATTTACTAATGC 59.487 45.833 0.00 0.00 40.78 3.56
674 675 5.674525 TGCTCTCCCACTCATTTACTAATG 58.325 41.667 0.00 0.00 42.06 1.90
675 676 5.957771 TGCTCTCCCACTCATTTACTAAT 57.042 39.130 0.00 0.00 0.00 1.73
676 677 5.451937 CGATGCTCTCCCACTCATTTACTAA 60.452 44.000 0.00 0.00 0.00 2.24
677 678 4.038042 CGATGCTCTCCCACTCATTTACTA 59.962 45.833 0.00 0.00 0.00 1.82
678 679 3.181471 CGATGCTCTCCCACTCATTTACT 60.181 47.826 0.00 0.00 0.00 2.24
679 680 3.126831 CGATGCTCTCCCACTCATTTAC 58.873 50.000 0.00 0.00 0.00 2.01
680 681 2.766263 ACGATGCTCTCCCACTCATTTA 59.234 45.455 0.00 0.00 0.00 1.40
681 682 1.556911 ACGATGCTCTCCCACTCATTT 59.443 47.619 0.00 0.00 0.00 2.32
682 683 1.137872 GACGATGCTCTCCCACTCATT 59.862 52.381 0.00 0.00 0.00 2.57
683 684 0.749649 GACGATGCTCTCCCACTCAT 59.250 55.000 0.00 0.00 0.00 2.90
684 685 1.323271 GGACGATGCTCTCCCACTCA 61.323 60.000 0.00 0.00 0.00 3.41
685 686 1.439644 GGACGATGCTCTCCCACTC 59.560 63.158 0.00 0.00 0.00 3.51
686 687 2.060980 GGGACGATGCTCTCCCACT 61.061 63.158 1.75 0.00 45.22 4.00
687 688 2.501610 GGGACGATGCTCTCCCAC 59.498 66.667 1.75 0.00 45.22 4.61
689 690 1.118356 ATCAGGGACGATGCTCTCCC 61.118 60.000 0.00 0.00 46.15 4.30
690 691 0.755686 AATCAGGGACGATGCTCTCC 59.244 55.000 0.00 0.00 0.00 3.71
691 692 2.611225 AAATCAGGGACGATGCTCTC 57.389 50.000 0.00 0.00 0.00 3.20
692 693 4.696479 ATAAAATCAGGGACGATGCTCT 57.304 40.909 0.00 0.00 0.00 4.09
693 694 5.059833 AGAATAAAATCAGGGACGATGCTC 58.940 41.667 0.00 0.00 0.00 4.26
694 695 5.041191 AGAATAAAATCAGGGACGATGCT 57.959 39.130 0.00 0.00 0.00 3.79
695 696 5.296780 TGAAGAATAAAATCAGGGACGATGC 59.703 40.000 0.00 0.00 0.00 3.91
696 697 6.238484 GGTGAAGAATAAAATCAGGGACGATG 60.238 42.308 0.00 0.00 0.00 3.84
697 698 5.823045 GGTGAAGAATAAAATCAGGGACGAT 59.177 40.000 0.00 0.00 0.00 3.73
698 699 5.183228 GGTGAAGAATAAAATCAGGGACGA 58.817 41.667 0.00 0.00 0.00 4.20
699 700 4.941263 TGGTGAAGAATAAAATCAGGGACG 59.059 41.667 0.00 0.00 0.00 4.79
700 701 7.410120 AATGGTGAAGAATAAAATCAGGGAC 57.590 36.000 0.00 0.00 0.00 4.46
701 702 9.135189 CATAATGGTGAAGAATAAAATCAGGGA 57.865 33.333 0.00 0.00 0.00 4.20
702 703 8.917088 ACATAATGGTGAAGAATAAAATCAGGG 58.083 33.333 0.00 0.00 0.00 4.45
712 713 8.964476 AGATCGTTTACATAATGGTGAAGAAT 57.036 30.769 0.00 0.00 0.00 2.40
713 714 8.664798 CAAGATCGTTTACATAATGGTGAAGAA 58.335 33.333 0.00 0.00 0.00 2.52
714 715 7.201609 GCAAGATCGTTTACATAATGGTGAAGA 60.202 37.037 0.00 0.00 0.00 2.87
715 716 6.907212 GCAAGATCGTTTACATAATGGTGAAG 59.093 38.462 0.00 0.00 0.00 3.02
716 717 6.597672 AGCAAGATCGTTTACATAATGGTGAA 59.402 34.615 0.00 0.00 0.00 3.18
717 718 6.037062 CAGCAAGATCGTTTACATAATGGTGA 59.963 38.462 0.00 0.00 36.24 4.02
718 719 6.183360 ACAGCAAGATCGTTTACATAATGGTG 60.183 38.462 0.00 0.00 39.07 4.17
719 720 5.880332 ACAGCAAGATCGTTTACATAATGGT 59.120 36.000 0.00 0.00 0.00 3.55
720 721 6.363577 ACAGCAAGATCGTTTACATAATGG 57.636 37.500 0.00 0.00 0.00 3.16
721 722 9.935682 AATAACAGCAAGATCGTTTACATAATG 57.064 29.630 0.00 0.00 0.00 1.90
723 724 9.767684 CAAATAACAGCAAGATCGTTTACATAA 57.232 29.630 0.00 0.00 0.00 1.90
724 725 9.157104 TCAAATAACAGCAAGATCGTTTACATA 57.843 29.630 0.00 0.00 0.00 2.29
725 726 8.039603 TCAAATAACAGCAAGATCGTTTACAT 57.960 30.769 0.00 0.00 0.00 2.29
726 727 7.360861 CCTCAAATAACAGCAAGATCGTTTACA 60.361 37.037 0.00 0.00 0.00 2.41
727 728 6.961554 CCTCAAATAACAGCAAGATCGTTTAC 59.038 38.462 0.00 0.00 0.00 2.01
728 729 6.876789 TCCTCAAATAACAGCAAGATCGTTTA 59.123 34.615 0.00 0.00 0.00 2.01
729 730 5.705441 TCCTCAAATAACAGCAAGATCGTTT 59.295 36.000 0.00 0.00 0.00 3.60
730 731 5.245531 TCCTCAAATAACAGCAAGATCGTT 58.754 37.500 0.00 0.00 0.00 3.85
731 732 4.832248 TCCTCAAATAACAGCAAGATCGT 58.168 39.130 0.00 0.00 0.00 3.73
732 733 5.801350 TTCCTCAAATAACAGCAAGATCG 57.199 39.130 0.00 0.00 0.00 3.69
733 734 9.674824 CATTATTCCTCAAATAACAGCAAGATC 57.325 33.333 0.00 0.00 41.46 2.75
734 735 9.193806 ACATTATTCCTCAAATAACAGCAAGAT 57.806 29.630 0.00 0.00 41.46 2.40
735 736 8.579850 ACATTATTCCTCAAATAACAGCAAGA 57.420 30.769 0.00 0.00 41.46 3.02
772 773 4.962155 TCACTGGTGTGGTTTTTGTTTTT 58.038 34.783 0.53 0.00 43.94 1.94
773 774 4.608948 TCACTGGTGTGGTTTTTGTTTT 57.391 36.364 0.53 0.00 43.94 2.43
774 775 4.382577 GGATCACTGGTGTGGTTTTTGTTT 60.383 41.667 0.00 0.00 43.94 2.83
775 776 3.132111 GGATCACTGGTGTGGTTTTTGTT 59.868 43.478 0.00 0.00 43.94 2.83
776 777 2.693074 GGATCACTGGTGTGGTTTTTGT 59.307 45.455 0.00 0.00 43.94 2.83
777 778 2.958355 AGGATCACTGGTGTGGTTTTTG 59.042 45.455 0.00 0.00 43.94 2.44
778 779 2.958355 CAGGATCACTGGTGTGGTTTTT 59.042 45.455 0.00 0.00 43.70 1.94
779 780 2.586425 CAGGATCACTGGTGTGGTTTT 58.414 47.619 0.00 0.00 43.70 2.43
780 781 2.276732 CAGGATCACTGGTGTGGTTT 57.723 50.000 0.00 0.00 43.70 3.27
792 793 2.031870 CACCACGTAGGATCAGGATCA 58.968 52.381 11.12 0.00 41.22 2.92
837 838 1.301479 GAACGTTCTCCCTGCCGTT 60.301 57.895 20.97 0.00 45.22 4.44
1465 1467 1.950216 AGCTGACATCTCGCTCGATAA 59.050 47.619 0.00 0.00 0.00 1.75
1469 1471 2.414058 ATAAGCTGACATCTCGCTCG 57.586 50.000 0.00 0.00 32.70 5.03
1522 1524 0.318441 CACCACACTCGTGATCCTGT 59.682 55.000 3.74 0.00 46.80 4.00
1530 1532 5.060506 TGATTCAATAAACACCACACTCGT 58.939 37.500 0.00 0.00 0.00 4.18
1560 1562 3.087906 CTACCGTTGGGGAGGGGG 61.088 72.222 0.00 0.00 41.04 5.40
1564 1566 1.898154 CAGTCCTACCGTTGGGGAG 59.102 63.158 0.00 0.00 44.79 4.30
1565 1567 2.288025 GCAGTCCTACCGTTGGGGA 61.288 63.158 0.00 0.00 39.97 4.81
1566 1568 2.267961 GCAGTCCTACCGTTGGGG 59.732 66.667 0.00 0.00 43.62 4.96
1567 1569 2.125673 CGCAGTCCTACCGTTGGG 60.126 66.667 0.00 0.00 40.11 4.12
1568 1570 1.153823 CTCGCAGTCCTACCGTTGG 60.154 63.158 0.00 0.00 0.00 3.77
1569 1571 0.038526 AACTCGCAGTCCTACCGTTG 60.039 55.000 0.00 0.00 0.00 4.10
1570 1572 0.038526 CAACTCGCAGTCCTACCGTT 60.039 55.000 0.00 0.00 0.00 4.44
1571 1573 1.177256 ACAACTCGCAGTCCTACCGT 61.177 55.000 0.00 0.00 0.00 4.83
1572 1574 0.456312 GACAACTCGCAGTCCTACCG 60.456 60.000 0.00 0.00 0.00 4.02
1583 1585 2.605818 TGGAAACAAACTCGACAACTCG 59.394 45.455 0.00 0.00 38.31 4.18
1625 1627 3.093057 TGGGCTTACACACAAACAAAGT 58.907 40.909 0.00 0.00 0.00 2.66
1626 1628 3.791973 TGGGCTTACACACAAACAAAG 57.208 42.857 0.00 0.00 0.00 2.77
1931 1965 0.336737 AACTGAGGGAGGGACGATCT 59.663 55.000 0.00 0.00 0.00 2.75
1932 1966 1.134670 CAAACTGAGGGAGGGACGATC 60.135 57.143 0.00 0.00 0.00 3.69
1936 1970 1.002011 GGCAAACTGAGGGAGGGAC 60.002 63.158 0.00 0.00 0.00 4.46
1949 1983 5.607939 TCTCTTTATCTATCCACGGCAAA 57.392 39.130 0.00 0.00 0.00 3.68
2045 2091 1.774254 TCTTCCTCAGAAACCAAGGCA 59.226 47.619 0.00 0.00 0.00 4.75
2101 2154 3.082548 CACACGAAGAGAAGTAGGAGGA 58.917 50.000 0.00 0.00 0.00 3.71
2205 2258 6.512741 GCTTACAAAGATGAGAAAAACCGTGA 60.513 38.462 0.00 0.00 0.00 4.35
2272 2351 1.401552 CACCCATATGCACAAAGTCCG 59.598 52.381 0.00 0.00 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.