Multiple sequence alignment - TraesCS7D01G208400
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G208400 | chr7D | 100.000 | 4625 | 0 | 0 | 1 | 4625 | 166205301 | 166200677 | 0.000000e+00 | 8541.0 |
1 | TraesCS7D01G208400 | chr7D | 89.754 | 1259 | 59 | 26 | 615 | 1828 | 165944240 | 165945473 | 0.000000e+00 | 1546.0 |
2 | TraesCS7D01G208400 | chr7D | 80.776 | 593 | 68 | 26 | 2252 | 2821 | 165946105 | 165946674 | 5.530000e-114 | 422.0 |
3 | TraesCS7D01G208400 | chr7D | 80.446 | 404 | 51 | 20 | 3273 | 3661 | 165947481 | 165947871 | 2.720000e-72 | 283.0 |
4 | TraesCS7D01G208400 | chr7D | 95.098 | 102 | 5 | 0 | 11 | 112 | 32673811 | 32673710 | 1.330000e-35 | 161.0 |
5 | TraesCS7D01G208400 | chr7D | 91.089 | 101 | 8 | 1 | 330 | 429 | 165943323 | 165943423 | 8.070000e-28 | 135.0 |
6 | TraesCS7D01G208400 | chr7D | 94.186 | 86 | 3 | 2 | 332 | 415 | 165944137 | 165944222 | 3.760000e-26 | 130.0 |
7 | TraesCS7D01G208400 | chr7D | 94.828 | 58 | 2 | 1 | 613 | 669 | 165943417 | 165943474 | 6.370000e-14 | 89.8 |
8 | TraesCS7D01G208400 | chr7D | 82.243 | 107 | 3 | 5 | 108 | 212 | 165943892 | 165943984 | 1.380000e-10 | 78.7 |
9 | TraesCS7D01G208400 | chr7B | 87.337 | 3688 | 247 | 89 | 735 | 4312 | 130504303 | 130500726 | 0.000000e+00 | 4021.0 |
10 | TraesCS7D01G208400 | chr7B | 89.779 | 1223 | 60 | 23 | 613 | 1796 | 130120224 | 130121420 | 0.000000e+00 | 1506.0 |
11 | TraesCS7D01G208400 | chr7B | 80.146 | 821 | 106 | 36 | 2866 | 3655 | 130124803 | 130125597 | 1.120000e-155 | 560.0 |
12 | TraesCS7D01G208400 | chr7B | 83.170 | 612 | 77 | 20 | 2229 | 2821 | 130121769 | 130122373 | 1.890000e-148 | 536.0 |
13 | TraesCS7D01G208400 | chr7B | 87.761 | 335 | 25 | 10 | 105 | 429 | 130505014 | 130504686 | 1.210000e-100 | 377.0 |
14 | TraesCS7D01G208400 | chr7B | 84.518 | 394 | 48 | 6 | 1026 | 1408 | 609704071 | 609704462 | 1.210000e-100 | 377.0 |
15 | TraesCS7D01G208400 | chr7B | 85.079 | 315 | 44 | 3 | 4312 | 4625 | 337111267 | 337110955 | 7.470000e-83 | 318.0 |
16 | TraesCS7D01G208400 | chr7B | 75.551 | 544 | 75 | 33 | 3127 | 3655 | 130186582 | 130187082 | 1.010000e-51 | 215.0 |
17 | TraesCS7D01G208400 | chr7B | 90.260 | 154 | 5 | 2 | 467 | 610 | 583586346 | 583586499 | 4.720000e-45 | 193.0 |
18 | TraesCS7D01G208400 | chr7B | 89.344 | 122 | 9 | 4 | 611 | 729 | 130504694 | 130504574 | 2.880000e-32 | 150.0 |
19 | TraesCS7D01G208400 | chr7B | 83.237 | 173 | 12 | 8 | 259 | 429 | 130119249 | 130119406 | 4.820000e-30 | 143.0 |
20 | TraesCS7D01G208400 | chr7B | 96.491 | 57 | 2 | 0 | 613 | 669 | 130119400 | 130119456 | 1.370000e-15 | 95.3 |
21 | TraesCS7D01G208400 | chr7A | 93.391 | 1044 | 41 | 8 | 791 | 1808 | 167680297 | 167681338 | 0.000000e+00 | 1520.0 |
22 | TraesCS7D01G208400 | chr7A | 86.466 | 1426 | 90 | 33 | 611 | 1968 | 167736578 | 167735188 | 0.000000e+00 | 1469.0 |
23 | TraesCS7D01G208400 | chr7A | 91.556 | 900 | 56 | 8 | 3729 | 4625 | 167732887 | 167732005 | 0.000000e+00 | 1223.0 |
24 | TraesCS7D01G208400 | chr7A | 91.775 | 693 | 44 | 9 | 2579 | 3267 | 167734063 | 167733380 | 0.000000e+00 | 952.0 |
25 | TraesCS7D01G208400 | chr7A | 90.244 | 451 | 36 | 5 | 3210 | 3657 | 167733365 | 167732920 | 2.400000e-162 | 582.0 |
26 | TraesCS7D01G208400 | chr7A | 81.854 | 507 | 69 | 19 | 2334 | 2821 | 167681916 | 167682418 | 5.570000e-109 | 405.0 |
27 | TraesCS7D01G208400 | chr7A | 88.822 | 331 | 13 | 9 | 117 | 429 | 167736894 | 167736570 | 7.260000e-103 | 385.0 |
28 | TraesCS7D01G208400 | chr7A | 79.404 | 403 | 50 | 27 | 3269 | 3654 | 167682998 | 167683384 | 2.140000e-63 | 254.0 |
29 | TraesCS7D01G208400 | chr7A | 89.560 | 182 | 14 | 3 | 2259 | 2439 | 167734960 | 167734783 | 4.660000e-55 | 226.0 |
30 | TraesCS7D01G208400 | chr7A | 90.511 | 137 | 10 | 2 | 1977 | 2113 | 167735205 | 167735072 | 1.320000e-40 | 178.0 |
31 | TraesCS7D01G208400 | chr7A | 76.608 | 342 | 42 | 22 | 105 | 429 | 167679024 | 167679344 | 2.230000e-33 | 154.0 |
32 | TraesCS7D01G208400 | chr7A | 89.815 | 108 | 8 | 2 | 105 | 212 | 167679798 | 167679902 | 8.070000e-28 | 135.0 |
33 | TraesCS7D01G208400 | chr7A | 100.000 | 28 | 0 | 0 | 585 | 612 | 654561379 | 654561406 | 8.000000e-03 | 52.8 |
34 | TraesCS7D01G208400 | chr6D | 83.594 | 512 | 59 | 6 | 905 | 1408 | 414241829 | 414241335 | 1.520000e-124 | 457.0 |
35 | TraesCS7D01G208400 | chr6D | 96.907 | 97 | 3 | 0 | 13 | 109 | 259920986 | 259920890 | 3.700000e-36 | 163.0 |
36 | TraesCS7D01G208400 | chr6D | 96.907 | 97 | 3 | 0 | 13 | 109 | 345168572 | 345168668 | 3.700000e-36 | 163.0 |
37 | TraesCS7D01G208400 | chr6D | 91.964 | 112 | 6 | 3 | 13 | 124 | 288540346 | 288540454 | 2.230000e-33 | 154.0 |
38 | TraesCS7D01G208400 | chr5B | 89.623 | 318 | 30 | 3 | 4308 | 4625 | 18326056 | 18325742 | 7.210000e-108 | 401.0 |
39 | TraesCS7D01G208400 | chr6A | 78.897 | 526 | 74 | 24 | 1001 | 1491 | 524868425 | 524867902 | 5.770000e-84 | 322.0 |
40 | TraesCS7D01G208400 | chr6B | 83.140 | 344 | 50 | 7 | 1001 | 1337 | 573161732 | 573161390 | 1.620000e-79 | 307.0 |
41 | TraesCS7D01G208400 | chr6B | 88.442 | 199 | 21 | 2 | 2623 | 2821 | 462306287 | 462306483 | 5.980000e-59 | 239.0 |
42 | TraesCS7D01G208400 | chr6B | 82.609 | 207 | 20 | 7 | 2992 | 3182 | 462306637 | 462306843 | 7.960000e-38 | 169.0 |
43 | TraesCS7D01G208400 | chr6B | 95.098 | 102 | 5 | 0 | 11 | 112 | 245700062 | 245699961 | 1.330000e-35 | 161.0 |
44 | TraesCS7D01G208400 | chr1D | 97.561 | 164 | 3 | 1 | 448 | 610 | 357211501 | 357211664 | 3.520000e-71 | 279.0 |
45 | TraesCS7D01G208400 | chr1D | 96.907 | 97 | 3 | 0 | 13 | 109 | 85675573 | 85675477 | 3.700000e-36 | 163.0 |
46 | TraesCS7D01G208400 | chr1D | 96.907 | 97 | 3 | 0 | 13 | 109 | 196353402 | 196353498 | 3.700000e-36 | 163.0 |
47 | TraesCS7D01G208400 | chr3B | 91.398 | 186 | 14 | 1 | 430 | 613 | 825609131 | 825608946 | 2.140000e-63 | 254.0 |
48 | TraesCS7D01G208400 | chr3B | 86.935 | 199 | 25 | 1 | 2623 | 2821 | 602907361 | 602907558 | 6.020000e-54 | 222.0 |
49 | TraesCS7D01G208400 | chr3B | 82.039 | 206 | 22 | 7 | 2992 | 3182 | 602907724 | 602907929 | 1.330000e-35 | 161.0 |
50 | TraesCS7D01G208400 | chr1B | 91.848 | 184 | 11 | 3 | 430 | 610 | 29367891 | 29368073 | 2.140000e-63 | 254.0 |
51 | TraesCS7D01G208400 | chr2A | 91.758 | 182 | 12 | 2 | 432 | 610 | 4068715 | 4068534 | 2.760000e-62 | 250.0 |
52 | TraesCS7D01G208400 | chr4B | 97.260 | 146 | 4 | 0 | 466 | 611 | 599825648 | 599825503 | 9.940000e-62 | 248.0 |
53 | TraesCS7D01G208400 | chr4B | 88.945 | 199 | 20 | 2 | 2623 | 2821 | 638663343 | 638663539 | 1.290000e-60 | 244.0 |
54 | TraesCS7D01G208400 | chr4B | 86.449 | 214 | 24 | 4 | 4106 | 4316 | 622842422 | 622842633 | 3.600000e-56 | 230.0 |
55 | TraesCS7D01G208400 | chr5D | 96.000 | 100 | 4 | 0 | 13 | 112 | 482193393 | 482193492 | 3.700000e-36 | 163.0 |
56 | TraesCS7D01G208400 | chr4A | 89.167 | 120 | 11 | 2 | 14 | 133 | 458519058 | 458519175 | 1.040000e-31 | 148.0 |
57 | TraesCS7D01G208400 | chr2B | 77.228 | 202 | 42 | 4 | 4308 | 4508 | 520061664 | 520061466 | 1.050000e-21 | 115.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G208400 | chr7D | 166200677 | 166205301 | 4624 | True | 8541.000000 | 8541 | 100.000000 | 1 | 4625 | 1 | chr7D.!!$R2 | 4624 |
1 | TraesCS7D01G208400 | chr7D | 165943323 | 165947871 | 4548 | False | 383.500000 | 1546 | 87.617429 | 108 | 3661 | 7 | chr7D.!!$F1 | 3553 |
2 | TraesCS7D01G208400 | chr7B | 130500726 | 130505014 | 4288 | True | 1516.000000 | 4021 | 88.147333 | 105 | 4312 | 3 | chr7B.!!$R2 | 4207 |
3 | TraesCS7D01G208400 | chr7B | 130119249 | 130125597 | 6348 | False | 568.060000 | 1506 | 86.564600 | 259 | 3655 | 5 | chr7B.!!$F4 | 3396 |
4 | TraesCS7D01G208400 | chr7B | 130186582 | 130187082 | 500 | False | 215.000000 | 215 | 75.551000 | 3127 | 3655 | 1 | chr7B.!!$F1 | 528 |
5 | TraesCS7D01G208400 | chr7A | 167732005 | 167736894 | 4889 | True | 716.428571 | 1469 | 89.847714 | 117 | 4625 | 7 | chr7A.!!$R1 | 4508 |
6 | TraesCS7D01G208400 | chr7A | 167679024 | 167683384 | 4360 | False | 493.600000 | 1520 | 84.214400 | 105 | 3654 | 5 | chr7A.!!$F2 | 3549 |
7 | TraesCS7D01G208400 | chr6A | 524867902 | 524868425 | 523 | True | 322.000000 | 322 | 78.897000 | 1001 | 1491 | 1 | chr6A.!!$R1 | 490 |
8 | TraesCS7D01G208400 | chr6B | 462306287 | 462306843 | 556 | False | 204.000000 | 239 | 85.525500 | 2623 | 3182 | 2 | chr6B.!!$F1 | 559 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
520 | 1083 | 0.035739 | GGGGGCGCGATTAATTAGGA | 59.964 | 55.0 | 12.10 | 0.0 | 0.00 | 2.94 | F |
601 | 1164 | 0.038526 | GTGGGAGTCCGTGTGTGTAG | 60.039 | 60.0 | 2.26 | 0.0 | 35.24 | 2.74 | F |
604 | 1167 | 0.246635 | GGAGTCCGTGTGTGTAGCAT | 59.753 | 55.0 | 0.00 | 0.0 | 0.00 | 3.79 | F |
787 | 2263 | 0.249073 | CTCGCGTGAACTCCCCATAG | 60.249 | 60.0 | 5.77 | 0.0 | 0.00 | 2.23 | F |
2713 | 5666 | 0.036732 | TCACTTTCTGGCTGCGGATT | 59.963 | 50.0 | 0.00 | 0.0 | 0.00 | 3.01 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1326 | 2858 | 1.000612 | GGTCGGGAAGGAGAGGTCT | 59.999 | 63.158 | 0.00 | 0.0 | 0.00 | 3.85 | R |
2450 | 4890 | 1.336887 | CGTAGGGATCCAATGGCGTAG | 60.337 | 57.143 | 15.23 | 0.0 | 0.00 | 3.51 | R |
2508 | 4954 | 2.550606 | GCATCGGCGGAAAATATTGGTA | 59.449 | 45.455 | 7.21 | 0.0 | 0.00 | 3.25 | R |
2747 | 5707 | 2.425539 | TCAGCATGCGAAACATCTTCA | 58.574 | 42.857 | 13.01 | 0.0 | 36.64 | 3.02 | R |
3964 | 9907 | 0.102300 | GCCACATATTCGCCCAAACC | 59.898 | 55.000 | 0.00 | 0.0 | 0.00 | 3.27 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
28 | 29 | 8.902540 | TTATGGAATCACACATATGTTACTCC | 57.097 | 34.615 | 5.37 | 8.62 | 36.72 | 3.85 |
29 | 30 | 5.680619 | TGGAATCACACATATGTTACTCCC | 58.319 | 41.667 | 5.37 | 4.52 | 36.72 | 4.30 |
30 | 31 | 5.063880 | GGAATCACACATATGTTACTCCCC | 58.936 | 45.833 | 5.37 | 0.71 | 36.72 | 4.81 |
31 | 32 | 5.397447 | GGAATCACACATATGTTACTCCCCA | 60.397 | 44.000 | 5.37 | 0.00 | 36.72 | 4.96 |
32 | 33 | 4.481368 | TCACACATATGTTACTCCCCAC | 57.519 | 45.455 | 5.37 | 0.00 | 36.72 | 4.61 |
33 | 34 | 4.101114 | TCACACATATGTTACTCCCCACT | 58.899 | 43.478 | 5.37 | 0.00 | 36.72 | 4.00 |
34 | 35 | 5.274015 | TCACACATATGTTACTCCCCACTA | 58.726 | 41.667 | 5.37 | 0.00 | 36.72 | 2.74 |
35 | 36 | 5.903010 | TCACACATATGTTACTCCCCACTAT | 59.097 | 40.000 | 5.37 | 0.00 | 36.72 | 2.12 |
37 | 38 | 7.232737 | TCACACATATGTTACTCCCCACTATAG | 59.767 | 40.741 | 5.37 | 0.00 | 36.72 | 1.31 |
40 | 41 | 6.954684 | ACATATGTTACTCCCCACTATAGAGG | 59.045 | 42.308 | 6.78 | 8.10 | 31.70 | 3.69 |
41 | 42 | 4.894252 | TGTTACTCCCCACTATAGAGGT | 57.106 | 45.455 | 14.29 | 0.00 | 31.70 | 3.85 |
42 | 43 | 5.999987 | TGTTACTCCCCACTATAGAGGTA | 57.000 | 43.478 | 14.29 | 2.62 | 31.70 | 3.08 |
43 | 44 | 5.950023 | TGTTACTCCCCACTATAGAGGTAG | 58.050 | 45.833 | 14.29 | 12.87 | 31.70 | 3.18 |
44 | 45 | 5.434376 | TGTTACTCCCCACTATAGAGGTAGT | 59.566 | 44.000 | 18.82 | 18.82 | 35.34 | 2.73 |
46 | 47 | 7.129349 | TGTTACTCCCCACTATAGAGGTAGTAA | 59.871 | 40.741 | 23.15 | 23.15 | 33.91 | 2.24 |
47 | 48 | 5.951204 | ACTCCCCACTATAGAGGTAGTAAC | 58.049 | 45.833 | 14.29 | 0.00 | 33.29 | 2.50 |
48 | 49 | 5.434376 | ACTCCCCACTATAGAGGTAGTAACA | 59.566 | 44.000 | 14.29 | 0.00 | 33.29 | 2.41 |
49 | 50 | 6.104392 | ACTCCCCACTATAGAGGTAGTAACAT | 59.896 | 42.308 | 14.29 | 0.00 | 33.29 | 2.71 |
52 | 53 | 6.890814 | CCCCACTATAGAGGTAGTAACATAGG | 59.109 | 46.154 | 14.29 | 1.86 | 33.29 | 2.57 |
53 | 54 | 6.377712 | CCCACTATAGAGGTAGTAACATAGGC | 59.622 | 46.154 | 14.29 | 0.00 | 33.29 | 3.93 |
55 | 56 | 8.327271 | CCACTATAGAGGTAGTAACATAGGCTA | 58.673 | 40.741 | 6.78 | 0.00 | 33.29 | 3.93 |
65 | 66 | 7.822822 | GGTAGTAACATAGGCTAATAACATGGG | 59.177 | 40.741 | 0.00 | 0.00 | 0.00 | 4.00 |
68 | 69 | 5.261040 | ACATAGGCTAATAACATGGGCAT | 57.739 | 39.130 | 0.00 | 0.00 | 0.00 | 4.40 |
84 | 85 | 5.950544 | TGGGCATGTTACTAGTCTATGTT | 57.049 | 39.130 | 0.00 | 0.00 | 0.00 | 2.71 |
85 | 86 | 7.441836 | CATGGGCATGTTACTAGTCTATGTTA | 58.558 | 38.462 | 0.00 | 0.00 | 34.23 | 2.41 |
87 | 88 | 6.610020 | TGGGCATGTTACTAGTCTATGTTACT | 59.390 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
91 | 92 | 9.843334 | GCATGTTACTAGTCTATGTTACTATCC | 57.157 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
99 | 100 | 6.525629 | AGTCTATGTTACTATCCATTGTGGC | 58.474 | 40.000 | 0.00 | 0.00 | 37.47 | 5.01 |
102 | 103 | 7.815068 | GTCTATGTTACTATCCATTGTGGCTAG | 59.185 | 40.741 | 5.55 | 5.55 | 40.94 | 3.42 |
115 | 116 | 2.041755 | TGTGGCTAGTCTGAGAGAGGAA | 59.958 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
135 | 136 | 2.340453 | AAGCTGTGCCACAAACGCTG | 62.340 | 55.000 | 10.40 | 0.00 | 31.22 | 5.18 |
155 | 156 | 3.592059 | TGCTCGCGGTAATTAAAGTCTT | 58.408 | 40.909 | 6.13 | 0.00 | 0.00 | 3.01 |
159 | 160 | 3.125658 | TCGCGGTAATTAAAGTCTTTGGC | 59.874 | 43.478 | 6.13 | 0.21 | 0.00 | 4.52 |
214 | 215 | 2.350102 | GGTTTGCAGGCAAAGTACGTAC | 60.350 | 50.000 | 18.85 | 18.10 | 45.16 | 3.67 |
219 | 220 | 2.353011 | GCAGGCAAAGTACGTACTACCA | 60.353 | 50.000 | 29.42 | 0.00 | 34.99 | 3.25 |
220 | 221 | 3.248266 | CAGGCAAAGTACGTACTACCAC | 58.752 | 50.000 | 29.42 | 20.80 | 34.99 | 4.16 |
222 | 223 | 2.095263 | GGCAAAGTACGTACTACCACGA | 60.095 | 50.000 | 27.59 | 0.00 | 44.69 | 4.35 |
223 | 224 | 3.564511 | GCAAAGTACGTACTACCACGAA | 58.435 | 45.455 | 27.59 | 0.00 | 44.69 | 3.85 |
228 | 229 | 2.798976 | ACGTACTACCACGAAGCAAA | 57.201 | 45.000 | 2.26 | 0.00 | 44.69 | 3.68 |
229 | 230 | 3.308438 | ACGTACTACCACGAAGCAAAT | 57.692 | 42.857 | 2.26 | 0.00 | 44.69 | 2.32 |
230 | 231 | 3.656559 | ACGTACTACCACGAAGCAAATT | 58.343 | 40.909 | 2.26 | 0.00 | 44.69 | 1.82 |
234 | 235 | 6.128742 | ACGTACTACCACGAAGCAAATTTAAG | 60.129 | 38.462 | 2.26 | 0.00 | 44.69 | 1.85 |
235 | 236 | 6.128742 | CGTACTACCACGAAGCAAATTTAAGT | 60.129 | 38.462 | 0.00 | 0.00 | 44.69 | 2.24 |
236 | 237 | 6.628919 | ACTACCACGAAGCAAATTTAAGTT | 57.371 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
237 | 238 | 7.034685 | ACTACCACGAAGCAAATTTAAGTTT | 57.965 | 32.000 | 0.00 | 0.00 | 0.00 | 2.66 |
240 | 241 | 7.688478 | ACCACGAAGCAAATTTAAGTTTTAC | 57.312 | 32.000 | 0.00 | 0.00 | 0.00 | 2.01 |
241 | 242 | 6.415573 | ACCACGAAGCAAATTTAAGTTTTACG | 59.584 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
242 | 243 | 6.278861 | CACGAAGCAAATTTAAGTTTTACGC | 58.721 | 36.000 | 0.00 | 0.00 | 0.00 | 4.42 |
244 | 245 | 6.075257 | ACGAAGCAAATTTAAGTTTTACGCAC | 60.075 | 34.615 | 6.90 | 1.73 | 0.00 | 5.34 |
247 | 248 | 7.707774 | AGCAAATTTAAGTTTTACGCACAAT | 57.292 | 28.000 | 6.90 | 0.00 | 0.00 | 2.71 |
248 | 249 | 8.137210 | AGCAAATTTAAGTTTTACGCACAATT | 57.863 | 26.923 | 6.90 | 0.00 | 0.00 | 2.32 |
249 | 250 | 9.250624 | AGCAAATTTAAGTTTTACGCACAATTA | 57.749 | 25.926 | 6.90 | 0.00 | 0.00 | 1.40 |
256 | 257 | 5.938322 | AGTTTTACGCACAATTATGGACAG | 58.062 | 37.500 | 0.00 | 0.00 | 0.00 | 3.51 |
258 | 259 | 5.539582 | TTTACGCACAATTATGGACAGAC | 57.460 | 39.130 | 0.00 | 0.00 | 0.00 | 3.51 |
259 | 260 | 1.999735 | ACGCACAATTATGGACAGACG | 59.000 | 47.619 | 0.00 | 0.00 | 0.00 | 4.18 |
261 | 262 | 2.670905 | CGCACAATTATGGACAGACGAA | 59.329 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
429 | 992 | 6.122850 | TCATCCTTCGCTCATTGTTAATTG | 57.877 | 37.500 | 0.00 | 0.00 | 0.00 | 2.32 |
444 | 1007 | 9.722056 | CATTGTTAATTGAGCTTTACTACATCC | 57.278 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
446 | 1009 | 8.263940 | TGTTAATTGAGCTTTACTACATCCAC | 57.736 | 34.615 | 0.00 | 0.00 | 0.00 | 4.02 |
447 | 1010 | 7.064134 | TGTTAATTGAGCTTTACTACATCCACG | 59.936 | 37.037 | 0.00 | 0.00 | 0.00 | 4.94 |
448 | 1011 | 3.520290 | TGAGCTTTACTACATCCACGG | 57.480 | 47.619 | 0.00 | 0.00 | 0.00 | 4.94 |
449 | 1012 | 3.093814 | TGAGCTTTACTACATCCACGGA | 58.906 | 45.455 | 0.00 | 0.00 | 0.00 | 4.69 |
452 | 1015 | 5.009710 | TGAGCTTTACTACATCCACGGATAG | 59.990 | 44.000 | 0.00 | 0.00 | 32.93 | 2.08 |
453 | 1016 | 4.894114 | AGCTTTACTACATCCACGGATAGT | 59.106 | 41.667 | 0.00 | 2.69 | 32.93 | 2.12 |
455 | 1018 | 6.548622 | AGCTTTACTACATCCACGGATAGTTA | 59.451 | 38.462 | 6.78 | 0.00 | 32.93 | 2.24 |
456 | 1019 | 6.640092 | GCTTTACTACATCCACGGATAGTTAC | 59.360 | 42.308 | 6.78 | 0.00 | 32.93 | 2.50 |
457 | 1020 | 4.825546 | ACTACATCCACGGATAGTTACG | 57.174 | 45.455 | 0.00 | 0.00 | 32.93 | 3.18 |
458 | 1021 | 3.567164 | ACTACATCCACGGATAGTTACGG | 59.433 | 47.826 | 0.00 | 0.00 | 32.93 | 4.02 |
459 | 1022 | 1.684983 | ACATCCACGGATAGTTACGGG | 59.315 | 52.381 | 0.00 | 0.00 | 32.93 | 5.28 |
475 | 1038 | 4.435970 | GGGGGTTTACGGGCCTGG | 62.436 | 72.222 | 18.00 | 4.46 | 0.00 | 4.45 |
476 | 1039 | 3.654143 | GGGGTTTACGGGCCTGGT | 61.654 | 66.667 | 18.00 | 10.93 | 0.00 | 4.00 |
480 | 1043 | 1.673337 | GTTTACGGGCCTGGTCACC | 60.673 | 63.158 | 18.00 | 0.00 | 0.00 | 4.02 |
481 | 1044 | 2.897762 | TTTACGGGCCTGGTCACCC | 61.898 | 63.158 | 18.00 | 0.00 | 43.25 | 4.61 |
491 | 1054 | 4.351054 | GGTCACCCAGCCCACCAG | 62.351 | 72.222 | 0.00 | 0.00 | 0.00 | 4.00 |
492 | 1055 | 3.570212 | GTCACCCAGCCCACCAGT | 61.570 | 66.667 | 0.00 | 0.00 | 0.00 | 4.00 |
493 | 1056 | 2.776526 | TCACCCAGCCCACCAGTT | 60.777 | 61.111 | 0.00 | 0.00 | 0.00 | 3.16 |
494 | 1057 | 1.462432 | TCACCCAGCCCACCAGTTA | 60.462 | 57.895 | 0.00 | 0.00 | 0.00 | 2.24 |
495 | 1058 | 1.063070 | TCACCCAGCCCACCAGTTAA | 61.063 | 55.000 | 0.00 | 0.00 | 0.00 | 2.01 |
496 | 1059 | 0.178975 | CACCCAGCCCACCAGTTAAA | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 1.52 |
497 | 1060 | 0.558712 | ACCCAGCCCACCAGTTAAAA | 59.441 | 50.000 | 0.00 | 0.00 | 0.00 | 1.52 |
498 | 1061 | 1.149077 | ACCCAGCCCACCAGTTAAAAT | 59.851 | 47.619 | 0.00 | 0.00 | 0.00 | 1.82 |
499 | 1062 | 1.824852 | CCCAGCCCACCAGTTAAAATC | 59.175 | 52.381 | 0.00 | 0.00 | 0.00 | 2.17 |
500 | 1063 | 1.472480 | CCAGCCCACCAGTTAAAATCG | 59.528 | 52.381 | 0.00 | 0.00 | 0.00 | 3.34 |
501 | 1064 | 1.472480 | CAGCCCACCAGTTAAAATCGG | 59.528 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
502 | 1065 | 0.815095 | GCCCACCAGTTAAAATCGGG | 59.185 | 55.000 | 0.00 | 0.00 | 35.18 | 5.14 |
503 | 1066 | 1.470051 | CCCACCAGTTAAAATCGGGG | 58.530 | 55.000 | 0.00 | 0.00 | 0.00 | 5.73 |
504 | 1067 | 1.470051 | CCACCAGTTAAAATCGGGGG | 58.530 | 55.000 | 0.00 | 0.00 | 0.00 | 5.40 |
519 | 1082 | 2.551644 | GGGGGCGCGATTAATTAGG | 58.448 | 57.895 | 12.10 | 0.00 | 0.00 | 2.69 |
520 | 1083 | 0.035739 | GGGGGCGCGATTAATTAGGA | 59.964 | 55.000 | 12.10 | 0.00 | 0.00 | 2.94 |
522 | 1085 | 1.001633 | GGGGCGCGATTAATTAGGAGA | 59.998 | 52.381 | 12.10 | 0.00 | 0.00 | 3.71 |
523 | 1086 | 2.549349 | GGGGCGCGATTAATTAGGAGAA | 60.549 | 50.000 | 12.10 | 0.00 | 0.00 | 2.87 |
524 | 1087 | 2.737252 | GGGCGCGATTAATTAGGAGAAG | 59.263 | 50.000 | 12.10 | 0.00 | 0.00 | 2.85 |
525 | 1088 | 2.737252 | GGCGCGATTAATTAGGAGAAGG | 59.263 | 50.000 | 12.10 | 0.00 | 0.00 | 3.46 |
526 | 1089 | 3.554337 | GGCGCGATTAATTAGGAGAAGGA | 60.554 | 47.826 | 12.10 | 0.00 | 0.00 | 3.36 |
527 | 1090 | 3.675698 | GCGCGATTAATTAGGAGAAGGAG | 59.324 | 47.826 | 12.10 | 0.00 | 0.00 | 3.69 |
529 | 1092 | 5.715070 | CGCGATTAATTAGGAGAAGGAGAT | 58.285 | 41.667 | 0.00 | 0.00 | 0.00 | 2.75 |
530 | 1093 | 6.159988 | CGCGATTAATTAGGAGAAGGAGATT | 58.840 | 40.000 | 0.00 | 0.00 | 0.00 | 2.40 |
531 | 1094 | 7.313646 | CGCGATTAATTAGGAGAAGGAGATTA | 58.686 | 38.462 | 0.00 | 0.00 | 0.00 | 1.75 |
532 | 1095 | 7.813148 | CGCGATTAATTAGGAGAAGGAGATTAA | 59.187 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
533 | 1096 | 9.660180 | GCGATTAATTAGGAGAAGGAGATTAAT | 57.340 | 33.333 | 0.00 | 0.00 | 34.29 | 1.40 |
560 | 1123 | 8.103948 | AGATGAATTAAAACAGGACAACTCAG | 57.896 | 34.615 | 0.00 | 0.00 | 0.00 | 3.35 |
561 | 1124 | 6.072112 | TGAATTAAAACAGGACAACTCAGC | 57.928 | 37.500 | 0.00 | 0.00 | 0.00 | 4.26 |
562 | 1125 | 5.592282 | TGAATTAAAACAGGACAACTCAGCA | 59.408 | 36.000 | 0.00 | 0.00 | 0.00 | 4.41 |
563 | 1126 | 5.695851 | ATTAAAACAGGACAACTCAGCAG | 57.304 | 39.130 | 0.00 | 0.00 | 0.00 | 4.24 |
564 | 1127 | 1.972872 | AAACAGGACAACTCAGCAGG | 58.027 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
565 | 1128 | 0.839946 | AACAGGACAACTCAGCAGGT | 59.160 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
567 | 1130 | 4.703703 | GGACAACTCAGCAGGTCC | 57.296 | 61.111 | 0.00 | 0.00 | 42.60 | 4.46 |
568 | 1131 | 1.374758 | GGACAACTCAGCAGGTCCG | 60.375 | 63.158 | 0.00 | 0.00 | 40.29 | 4.79 |
569 | 1132 | 1.367840 | GACAACTCAGCAGGTCCGT | 59.632 | 57.895 | 0.00 | 0.00 | 0.00 | 4.69 |
573 | 1136 | 2.069273 | CAACTCAGCAGGTCCGTAAAG | 58.931 | 52.381 | 0.00 | 0.00 | 0.00 | 1.85 |
574 | 1137 | 1.339097 | ACTCAGCAGGTCCGTAAAGT | 58.661 | 50.000 | 0.00 | 0.00 | 0.00 | 2.66 |
578 | 1141 | 1.000955 | CAGCAGGTCCGTAAAGTCTGT | 59.999 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
579 | 1142 | 1.000955 | AGCAGGTCCGTAAAGTCTGTG | 59.999 | 52.381 | 0.00 | 0.00 | 0.00 | 3.66 |
580 | 1143 | 1.000506 | GCAGGTCCGTAAAGTCTGTGA | 59.999 | 52.381 | 0.00 | 0.00 | 0.00 | 3.58 |
581 | 1144 | 2.927014 | GCAGGTCCGTAAAGTCTGTGAG | 60.927 | 54.545 | 0.00 | 0.00 | 0.00 | 3.51 |
582 | 1145 | 1.893801 | AGGTCCGTAAAGTCTGTGAGG | 59.106 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
583 | 1146 | 1.617357 | GGTCCGTAAAGTCTGTGAGGT | 59.383 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
584 | 1147 | 2.609737 | GGTCCGTAAAGTCTGTGAGGTG | 60.610 | 54.545 | 0.00 | 0.00 | 0.00 | 4.00 |
585 | 1148 | 1.616865 | TCCGTAAAGTCTGTGAGGTGG | 59.383 | 52.381 | 0.00 | 0.00 | 0.00 | 4.61 |
587 | 1150 | 1.616865 | CGTAAAGTCTGTGAGGTGGGA | 59.383 | 52.381 | 0.00 | 0.00 | 0.00 | 4.37 |
588 | 1151 | 2.352814 | CGTAAAGTCTGTGAGGTGGGAG | 60.353 | 54.545 | 0.00 | 0.00 | 0.00 | 4.30 |
589 | 1152 | 1.807814 | AAAGTCTGTGAGGTGGGAGT | 58.192 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
590 | 1153 | 1.343069 | AAGTCTGTGAGGTGGGAGTC | 58.657 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
591 | 1154 | 0.543174 | AGTCTGTGAGGTGGGAGTCC | 60.543 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
592 | 1155 | 1.606601 | TCTGTGAGGTGGGAGTCCG | 60.607 | 63.158 | 2.26 | 0.00 | 35.24 | 4.79 |
594 | 1157 | 2.159819 | CTGTGAGGTGGGAGTCCGTG | 62.160 | 65.000 | 2.26 | 0.00 | 35.24 | 4.94 |
595 | 1158 | 2.200370 | TGAGGTGGGAGTCCGTGT | 59.800 | 61.111 | 2.26 | 0.00 | 35.24 | 4.49 |
596 | 1159 | 2.207229 | TGAGGTGGGAGTCCGTGTG | 61.207 | 63.158 | 2.26 | 0.00 | 35.24 | 3.82 |
598 | 1161 | 2.030562 | GGTGGGAGTCCGTGTGTG | 59.969 | 66.667 | 2.26 | 0.00 | 35.24 | 3.82 |
599 | 1162 | 2.803817 | GGTGGGAGTCCGTGTGTGT | 61.804 | 63.158 | 2.26 | 0.00 | 35.24 | 3.72 |
600 | 1163 | 1.466025 | GGTGGGAGTCCGTGTGTGTA | 61.466 | 60.000 | 2.26 | 0.00 | 35.24 | 2.90 |
601 | 1164 | 0.038526 | GTGGGAGTCCGTGTGTGTAG | 60.039 | 60.000 | 2.26 | 0.00 | 35.24 | 2.74 |
603 | 1166 | 1.663739 | GGAGTCCGTGTGTGTAGCA | 59.336 | 57.895 | 0.00 | 0.00 | 0.00 | 3.49 |
604 | 1167 | 0.246635 | GGAGTCCGTGTGTGTAGCAT | 59.753 | 55.000 | 0.00 | 0.00 | 0.00 | 3.79 |
605 | 1168 | 1.337823 | GGAGTCCGTGTGTGTAGCATT | 60.338 | 52.381 | 0.00 | 0.00 | 0.00 | 3.56 |
606 | 1169 | 2.413837 | GAGTCCGTGTGTGTAGCATTT | 58.586 | 47.619 | 0.00 | 0.00 | 0.00 | 2.32 |
608 | 1171 | 3.211045 | AGTCCGTGTGTGTAGCATTTTT | 58.789 | 40.909 | 0.00 | 0.00 | 0.00 | 1.94 |
609 | 1172 | 3.003275 | AGTCCGTGTGTGTAGCATTTTTG | 59.997 | 43.478 | 0.00 | 0.00 | 0.00 | 2.44 |
610 | 1173 | 2.946329 | TCCGTGTGTGTAGCATTTTTGT | 59.054 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
611 | 1174 | 3.378742 | TCCGTGTGTGTAGCATTTTTGTT | 59.621 | 39.130 | 0.00 | 0.00 | 0.00 | 2.83 |
757 | 2223 | 0.468226 | TTCCAGTCCACGTCAAGCTT | 59.532 | 50.000 | 0.00 | 0.00 | 0.00 | 3.74 |
763 | 2229 | 2.102588 | AGTCCACGTCAAGCTTAACAGT | 59.897 | 45.455 | 0.00 | 0.00 | 0.00 | 3.55 |
781 | 2257 | 1.736681 | AGTACTACTCGCGTGAACTCC | 59.263 | 52.381 | 16.04 | 0.00 | 0.00 | 3.85 |
785 | 2261 | 0.968901 | TACTCGCGTGAACTCCCCAT | 60.969 | 55.000 | 16.04 | 0.00 | 0.00 | 4.00 |
786 | 2262 | 0.968901 | ACTCGCGTGAACTCCCCATA | 60.969 | 55.000 | 16.04 | 0.00 | 0.00 | 2.74 |
787 | 2263 | 0.249073 | CTCGCGTGAACTCCCCATAG | 60.249 | 60.000 | 5.77 | 0.00 | 0.00 | 2.23 |
788 | 2264 | 1.883084 | CGCGTGAACTCCCCATAGC | 60.883 | 63.158 | 0.00 | 0.00 | 0.00 | 2.97 |
1703 | 3313 | 1.752358 | ATGATGCAGACGCCGGAGAT | 61.752 | 55.000 | 13.83 | 0.00 | 37.32 | 2.75 |
1804 | 3414 | 4.019321 | AGGAGGTAATGCACTGCTTCTTTA | 60.019 | 41.667 | 1.98 | 0.00 | 30.79 | 1.85 |
1808 | 3418 | 7.049799 | AGGTAATGCACTGCTTCTTTAAAAA | 57.950 | 32.000 | 1.98 | 0.00 | 0.00 | 1.94 |
1853 | 3727 | 5.835113 | TGCTATTAAGGCCTGAATCAAAC | 57.165 | 39.130 | 19.44 | 7.83 | 0.00 | 2.93 |
1875 | 3797 | 9.588774 | CAAACAACTTGATTGCAATCTAAAATG | 57.411 | 29.630 | 33.23 | 26.03 | 42.62 | 2.32 |
1881 | 3803 | 8.525316 | ACTTGATTGCAATCTAAAATGATCACA | 58.475 | 29.630 | 33.23 | 11.83 | 36.39 | 3.58 |
1900 | 3822 | 9.967451 | TGATCACAGTATAAATTGGTCCTTTTA | 57.033 | 29.630 | 0.00 | 0.00 | 0.00 | 1.52 |
1940 | 3867 | 9.814899 | TCATCTGCATTTAAAAAGAAAGTTTCA | 57.185 | 25.926 | 17.65 | 0.00 | 0.00 | 2.69 |
1962 | 3889 | 5.131809 | TCATGGGAAGGGAAACAATGTTTTT | 59.868 | 36.000 | 13.00 | 3.46 | 0.00 | 1.94 |
2010 | 4139 | 3.482436 | TCTTTCAAGCAACGGTGGTATT | 58.518 | 40.909 | 5.16 | 0.00 | 34.25 | 1.89 |
2157 | 4438 | 7.446931 | TCAATACTCTGTTGAACATGCCTTTAA | 59.553 | 33.333 | 0.00 | 0.00 | 32.98 | 1.52 |
2179 | 4461 | 4.603989 | ATGCTGTATGGATCTCTCTGTG | 57.396 | 45.455 | 0.00 | 0.00 | 0.00 | 3.66 |
2186 | 4468 | 7.370905 | TGTATGGATCTCTCTGTGATTTCAT | 57.629 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2195 | 4477 | 8.803397 | TCTCTCTGTGATTTCATTCATGAATT | 57.197 | 30.769 | 18.41 | 4.06 | 45.30 | 2.17 |
2196 | 4478 | 8.890718 | TCTCTCTGTGATTTCATTCATGAATTC | 58.109 | 33.333 | 18.41 | 13.52 | 45.30 | 2.17 |
2219 | 4524 | 4.506255 | GGGTTCCCGCCCTCATGG | 62.506 | 72.222 | 0.00 | 0.00 | 45.22 | 3.66 |
2233 | 4538 | 5.357032 | CGCCCTCATGGTAGTCTAAAATTTT | 59.643 | 40.000 | 8.75 | 8.75 | 36.04 | 1.82 |
2373 | 4704 | 4.875544 | TTTTCTCTGTTTCACTCGGTTG | 57.124 | 40.909 | 0.00 | 0.00 | 0.00 | 3.77 |
2415 | 4768 | 6.547510 | ACAAGCCATGGGTTTATCTCTTTATC | 59.452 | 38.462 | 26.36 | 0.00 | 33.16 | 1.75 |
2418 | 4771 | 5.940470 | GCCATGGGTTTATCTCTTTATCGAT | 59.060 | 40.000 | 15.13 | 2.16 | 0.00 | 3.59 |
2508 | 4954 | 7.268586 | CACCATCTAGAGCTGTTAATAGTGTT | 58.731 | 38.462 | 0.00 | 0.00 | 0.00 | 3.32 |
2533 | 4979 | 1.295792 | TATTTTCCGCCGATGCAGAC | 58.704 | 50.000 | 0.00 | 0.00 | 37.32 | 3.51 |
2553 | 5015 | 4.075763 | ACGTGTCTTAAGTACAGTAGCG | 57.924 | 45.455 | 1.63 | 7.91 | 0.00 | 4.26 |
2647 | 5600 | 5.239359 | TGAGTGATGATGCAAAATACAGC | 57.761 | 39.130 | 0.00 | 0.00 | 0.00 | 4.40 |
2684 | 5637 | 6.322931 | TCCTACTTGAATATCTGGAGGCATA | 58.677 | 40.000 | 0.00 | 0.00 | 0.00 | 3.14 |
2689 | 5642 | 6.328672 | ACTTGAATATCTGGAGGCATAAGACT | 59.671 | 38.462 | 0.00 | 0.00 | 33.94 | 3.24 |
2713 | 5666 | 0.036732 | TCACTTTCTGGCTGCGGATT | 59.963 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2746 | 5706 | 6.295011 | GCAGTAGCAGTCATAGATCTACCATT | 60.295 | 42.308 | 4.10 | 0.00 | 41.58 | 3.16 |
2747 | 5707 | 7.665690 | CAGTAGCAGTCATAGATCTACCATTT | 58.334 | 38.462 | 4.10 | 0.00 | 32.31 | 2.32 |
2751 | 5711 | 7.215789 | AGCAGTCATAGATCTACCATTTGAAG | 58.784 | 38.462 | 4.10 | 2.78 | 0.00 | 3.02 |
2924 | 8397 | 6.601613 | TGCGTACCAAGGATGATCTTAAATTT | 59.398 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
3182 | 8683 | 3.065925 | GCAATCCAGACCATCAAACTAGC | 59.934 | 47.826 | 0.00 | 0.00 | 0.00 | 3.42 |
3258 | 8829 | 6.911511 | CGAAGTTTTCTCTAGGGTAACTATCG | 59.088 | 42.308 | 18.01 | 18.01 | 0.00 | 2.92 |
3275 | 9194 | 6.992063 | ACTATCGCATTGAAGATTTGAAGT | 57.008 | 33.333 | 1.38 | 0.00 | 0.00 | 3.01 |
3277 | 9196 | 8.492673 | ACTATCGCATTGAAGATTTGAAGTTA | 57.507 | 30.769 | 1.38 | 0.00 | 0.00 | 2.24 |
3347 | 9267 | 4.842139 | TTTTTCTCGCTCGAAGATAAGC | 57.158 | 40.909 | 0.00 | 0.00 | 33.89 | 3.09 |
3348 | 9268 | 3.503827 | TTTCTCGCTCGAAGATAAGCA | 57.496 | 42.857 | 0.00 | 0.00 | 38.45 | 3.91 |
3380 | 9300 | 6.239217 | TCAGCAGAGCTTTTCATTAGGATA | 57.761 | 37.500 | 0.00 | 0.00 | 36.40 | 2.59 |
3382 | 9302 | 6.709397 | TCAGCAGAGCTTTTCATTAGGATATG | 59.291 | 38.462 | 0.00 | 0.00 | 36.40 | 1.78 |
3399 | 9321 | 9.553064 | TTAGGATATGCTTTGATTTTCTCTCTC | 57.447 | 33.333 | 0.65 | 0.00 | 0.00 | 3.20 |
3400 | 9322 | 7.571919 | AGGATATGCTTTGATTTTCTCTCTCA | 58.428 | 34.615 | 0.00 | 0.00 | 0.00 | 3.27 |
3401 | 9323 | 7.498570 | AGGATATGCTTTGATTTTCTCTCTCAC | 59.501 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
3472 | 9398 | 2.961062 | ACTTGCTGTTCAAATCTTGGCT | 59.039 | 40.909 | 0.00 | 0.00 | 33.65 | 4.75 |
3473 | 9399 | 3.005155 | ACTTGCTGTTCAAATCTTGGCTC | 59.995 | 43.478 | 0.00 | 0.00 | 33.65 | 4.70 |
3709 | 9650 | 1.209019 | TGGCCTCTTCAGATTCAGAGC | 59.791 | 52.381 | 3.32 | 0.00 | 36.03 | 4.09 |
3717 | 9658 | 1.203287 | TCAGATTCAGAGCGTGGACAG | 59.797 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
3748 | 9689 | 3.321111 | TGGAACGATAGGGCTAGTGATTC | 59.679 | 47.826 | 0.00 | 0.00 | 43.77 | 2.52 |
3749 | 9690 | 3.321111 | GGAACGATAGGGCTAGTGATTCA | 59.679 | 47.826 | 0.00 | 0.00 | 43.77 | 2.57 |
3750 | 9691 | 4.021016 | GGAACGATAGGGCTAGTGATTCAT | 60.021 | 45.833 | 0.00 | 0.00 | 43.77 | 2.57 |
3751 | 9692 | 4.527509 | ACGATAGGGCTAGTGATTCATG | 57.472 | 45.455 | 0.00 | 0.00 | 43.77 | 3.07 |
3753 | 9694 | 3.511540 | CGATAGGGCTAGTGATTCATGGA | 59.488 | 47.826 | 0.00 | 0.00 | 0.00 | 3.41 |
3754 | 9695 | 4.619394 | CGATAGGGCTAGTGATTCATGGAC | 60.619 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3755 | 9696 | 2.481441 | AGGGCTAGTGATTCATGGACA | 58.519 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
3796 | 9739 | 0.250640 | CCAGAGGCTGCAAGAAGTGT | 60.251 | 55.000 | 0.50 | 0.00 | 34.07 | 3.55 |
3797 | 9740 | 1.602311 | CAGAGGCTGCAAGAAGTGTT | 58.398 | 50.000 | 0.50 | 0.00 | 34.07 | 3.32 |
3798 | 9741 | 1.952296 | CAGAGGCTGCAAGAAGTGTTT | 59.048 | 47.619 | 0.50 | 0.00 | 34.07 | 2.83 |
3799 | 9742 | 3.141398 | CAGAGGCTGCAAGAAGTGTTTA | 58.859 | 45.455 | 0.50 | 0.00 | 34.07 | 2.01 |
3843 | 9786 | 0.338814 | ATCAAGAGTACCCCGTCCCT | 59.661 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
3850 | 9793 | 0.830866 | GTACCCCGTCCCTATGGAGG | 60.831 | 65.000 | 0.14 | 0.14 | 42.85 | 4.30 |
3911 | 9854 | 1.202065 | CGTTCACCATTCATTCAGCGG | 60.202 | 52.381 | 0.00 | 0.00 | 0.00 | 5.52 |
3913 | 9856 | 2.684881 | GTTCACCATTCATTCAGCGGAT | 59.315 | 45.455 | 0.00 | 0.00 | 0.00 | 4.18 |
3928 | 9871 | 1.734465 | GCGGATAATATGCTGGTGAGC | 59.266 | 52.381 | 0.00 | 0.00 | 46.44 | 4.26 |
3955 | 9898 | 2.588620 | ACCAAGCTCGGATACTAGGAG | 58.411 | 52.381 | 0.00 | 0.00 | 0.00 | 3.69 |
3957 | 9900 | 2.588620 | CAAGCTCGGATACTAGGAGGT | 58.411 | 52.381 | 0.00 | 0.00 | 39.97 | 3.85 |
3961 | 9904 | 3.651904 | AGCTCGGATACTAGGAGGTAAGA | 59.348 | 47.826 | 0.00 | 0.00 | 36.82 | 2.10 |
3964 | 9907 | 5.484715 | CTCGGATACTAGGAGGTAAGAGAG | 58.515 | 50.000 | 0.00 | 0.00 | 30.75 | 3.20 |
3966 | 9909 | 4.041938 | CGGATACTAGGAGGTAAGAGAGGT | 59.958 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
4117 | 10061 | 2.923655 | CGTGCCAGTCTATTGTACAGTG | 59.076 | 50.000 | 0.34 | 0.00 | 0.00 | 3.66 |
4387 | 10338 | 8.223769 | GTCGTTCATGTTTAATGCTATCATAGG | 58.776 | 37.037 | 0.00 | 0.00 | 31.46 | 2.57 |
4395 | 10346 | 8.097038 | TGTTTAATGCTATCATAGGAAGCCTAG | 58.903 | 37.037 | 8.41 | 0.00 | 39.70 | 3.02 |
4417 | 10368 | 4.889409 | AGATCTGAGAGAGATTGACCTCAC | 59.111 | 45.833 | 0.00 | 0.00 | 41.91 | 3.51 |
4442 | 10393 | 2.539302 | AGGCAATACACTTGGGCAAAT | 58.461 | 42.857 | 0.00 | 0.00 | 0.00 | 2.32 |
4451 | 10402 | 5.705609 | ACACTTGGGCAAATAAGTTACAG | 57.294 | 39.130 | 0.00 | 0.00 | 35.08 | 2.74 |
4472 | 10423 | 7.621428 | ACAGAATCCAACATATGAGAAGTTG | 57.379 | 36.000 | 10.38 | 2.88 | 41.61 | 3.16 |
4494 | 10445 | 6.769134 | TGGATAGAGTTTTGACGAGTATCA | 57.231 | 37.500 | 0.00 | 0.00 | 33.17 | 2.15 |
4508 | 10459 | 6.432783 | TGACGAGTATCAAATGGGAACAAAAT | 59.567 | 34.615 | 0.00 | 0.00 | 38.81 | 1.82 |
4518 | 10469 | 4.953940 | TGGGAACAAAATTTTCCTCTGG | 57.046 | 40.909 | 0.00 | 0.00 | 42.10 | 3.86 |
4520 | 10471 | 5.459505 | TGGGAACAAAATTTTCCTCTGGTA | 58.540 | 37.500 | 0.00 | 0.00 | 42.10 | 3.25 |
4522 | 10473 | 6.556874 | TGGGAACAAAATTTTCCTCTGGTAAT | 59.443 | 34.615 | 0.00 | 0.00 | 42.10 | 1.89 |
4523 | 10474 | 6.873605 | GGGAACAAAATTTTCCTCTGGTAATG | 59.126 | 38.462 | 0.00 | 0.00 | 42.10 | 1.90 |
4527 | 10478 | 6.326323 | ACAAAATTTTCCTCTGGTAATGGTGT | 59.674 | 34.615 | 0.00 | 0.00 | 0.00 | 4.16 |
4531 | 10482 | 1.003118 | TCCTCTGGTAATGGTGTGTGC | 59.997 | 52.381 | 0.00 | 0.00 | 0.00 | 4.57 |
4554 | 10505 | 5.810587 | GCGTTACAAAGAGGAATATCTGACA | 59.189 | 40.000 | 0.00 | 0.00 | 0.00 | 3.58 |
4580 | 10531 | 1.702957 | ACCCCTTCTTGTTGATTCCGA | 59.297 | 47.619 | 0.00 | 0.00 | 0.00 | 4.55 |
4586 | 10537 | 4.637534 | CCTTCTTGTTGATTCCGATGATGT | 59.362 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
4589 | 10540 | 3.348647 | TGTTGATTCCGATGATGTGGT | 57.651 | 42.857 | 0.00 | 0.00 | 0.00 | 4.16 |
4608 | 10559 | 7.675897 | ATGTGGTGCATCATGGAAACAAAAAC | 61.676 | 38.462 | 1.27 | 0.00 | 37.21 | 2.43 |
4620 | 10571 | 7.090953 | TGGAAACAAAAACATCTACTCGTTT | 57.909 | 32.000 | 0.00 | 0.00 | 37.44 | 3.60 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
8 | 9 | 5.527582 | GTGGGGAGTAACATATGTGTGATTC | 59.472 | 44.000 | 9.63 | 4.61 | 38.92 | 2.52 |
9 | 10 | 5.191722 | AGTGGGGAGTAACATATGTGTGATT | 59.808 | 40.000 | 9.63 | 0.00 | 38.92 | 2.57 |
10 | 11 | 4.721776 | AGTGGGGAGTAACATATGTGTGAT | 59.278 | 41.667 | 9.63 | 0.00 | 38.92 | 3.06 |
12 | 13 | 4.487714 | AGTGGGGAGTAACATATGTGTG | 57.512 | 45.455 | 9.63 | 0.00 | 38.92 | 3.82 |
13 | 14 | 7.302948 | TCTATAGTGGGGAGTAACATATGTGT | 58.697 | 38.462 | 9.63 | 2.63 | 41.28 | 3.72 |
15 | 16 | 6.954684 | CCTCTATAGTGGGGAGTAACATATGT | 59.045 | 42.308 | 12.29 | 1.41 | 0.00 | 2.29 |
16 | 17 | 6.954684 | ACCTCTATAGTGGGGAGTAACATATG | 59.045 | 42.308 | 21.82 | 0.00 | 33.22 | 1.78 |
19 | 20 | 5.420215 | ACCTCTATAGTGGGGAGTAACAT | 57.580 | 43.478 | 21.82 | 0.00 | 33.22 | 2.71 |
21 | 22 | 5.951204 | ACTACCTCTATAGTGGGGAGTAAC | 58.049 | 45.833 | 22.09 | 0.00 | 34.02 | 2.50 |
22 | 23 | 7.129349 | TGTTACTACCTCTATAGTGGGGAGTAA | 59.871 | 40.741 | 28.26 | 28.26 | 38.03 | 2.24 |
23 | 24 | 6.621098 | TGTTACTACCTCTATAGTGGGGAGTA | 59.379 | 42.308 | 23.32 | 23.32 | 36.09 | 2.59 |
24 | 25 | 5.434376 | TGTTACTACCTCTATAGTGGGGAGT | 59.566 | 44.000 | 24.72 | 24.72 | 36.09 | 3.85 |
28 | 29 | 6.377712 | GCCTATGTTACTACCTCTATAGTGGG | 59.622 | 46.154 | 21.82 | 16.23 | 36.09 | 4.61 |
29 | 30 | 7.176490 | AGCCTATGTTACTACCTCTATAGTGG | 58.824 | 42.308 | 17.49 | 17.49 | 36.09 | 4.00 |
30 | 31 | 9.736414 | TTAGCCTATGTTACTACCTCTATAGTG | 57.264 | 37.037 | 0.00 | 0.00 | 36.09 | 2.74 |
37 | 38 | 9.640963 | CATGTTATTAGCCTATGTTACTACCTC | 57.359 | 37.037 | 0.00 | 0.00 | 0.00 | 3.85 |
40 | 41 | 7.333672 | GCCCATGTTATTAGCCTATGTTACTAC | 59.666 | 40.741 | 0.00 | 0.00 | 0.00 | 2.73 |
41 | 42 | 7.016760 | TGCCCATGTTATTAGCCTATGTTACTA | 59.983 | 37.037 | 0.00 | 0.00 | 0.00 | 1.82 |
42 | 43 | 6.183361 | TGCCCATGTTATTAGCCTATGTTACT | 60.183 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
43 | 44 | 6.001460 | TGCCCATGTTATTAGCCTATGTTAC | 58.999 | 40.000 | 0.00 | 0.00 | 0.00 | 2.50 |
44 | 45 | 6.194285 | TGCCCATGTTATTAGCCTATGTTA | 57.806 | 37.500 | 0.00 | 0.00 | 0.00 | 2.41 |
46 | 47 | 4.722526 | TGCCCATGTTATTAGCCTATGT | 57.277 | 40.909 | 0.00 | 0.00 | 0.00 | 2.29 |
47 | 48 | 5.571784 | CATGCCCATGTTATTAGCCTATG | 57.428 | 43.478 | 0.13 | 0.00 | 34.23 | 2.23 |
60 | 61 | 5.858381 | ACATAGACTAGTAACATGCCCATG | 58.142 | 41.667 | 6.71 | 6.71 | 44.15 | 3.66 |
65 | 66 | 9.843334 | GGATAGTAACATAGACTAGTAACATGC | 57.157 | 37.037 | 0.00 | 0.00 | 33.03 | 4.06 |
72 | 73 | 8.861086 | CCACAATGGATAGTAACATAGACTAGT | 58.139 | 37.037 | 0.00 | 0.00 | 40.96 | 2.57 |
73 | 74 | 7.815068 | GCCACAATGGATAGTAACATAGACTAG | 59.185 | 40.741 | 0.00 | 0.00 | 40.96 | 2.57 |
74 | 75 | 7.509318 | AGCCACAATGGATAGTAACATAGACTA | 59.491 | 37.037 | 0.00 | 0.00 | 40.96 | 2.59 |
87 | 88 | 4.546674 | TCTCAGACTAGCCACAATGGATA | 58.453 | 43.478 | 0.00 | 0.00 | 40.96 | 2.59 |
91 | 92 | 3.181477 | CCTCTCTCAGACTAGCCACAATG | 60.181 | 52.174 | 0.00 | 0.00 | 0.00 | 2.82 |
92 | 93 | 3.030291 | CCTCTCTCAGACTAGCCACAAT | 58.970 | 50.000 | 0.00 | 0.00 | 0.00 | 2.71 |
93 | 94 | 2.041755 | TCCTCTCTCAGACTAGCCACAA | 59.958 | 50.000 | 0.00 | 0.00 | 0.00 | 3.33 |
95 | 96 | 2.428544 | TCCTCTCTCAGACTAGCCAC | 57.571 | 55.000 | 0.00 | 0.00 | 0.00 | 5.01 |
97 | 98 | 3.430236 | GCTTTTCCTCTCTCAGACTAGCC | 60.430 | 52.174 | 0.00 | 0.00 | 0.00 | 3.93 |
99 | 100 | 4.462483 | ACAGCTTTTCCTCTCTCAGACTAG | 59.538 | 45.833 | 0.00 | 0.00 | 0.00 | 2.57 |
102 | 103 | 3.324993 | CACAGCTTTTCCTCTCTCAGAC | 58.675 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
115 | 116 | 1.226945 | GCGTTTGTGGCACAGCTTT | 60.227 | 52.632 | 20.97 | 0.00 | 41.80 | 3.51 |
135 | 136 | 4.331962 | CAAAGACTTTAATTACCGCGAGC | 58.668 | 43.478 | 8.23 | 0.00 | 0.00 | 5.03 |
155 | 156 | 1.713647 | TGGTGGGAGGAAATTAGCCAA | 59.286 | 47.619 | 0.68 | 0.00 | 0.00 | 4.52 |
159 | 160 | 6.194967 | ACCTAATTTGGTGGGAGGAAATTAG | 58.805 | 40.000 | 10.97 | 0.00 | 43.30 | 1.73 |
214 | 215 | 7.924103 | AAAACTTAAATTTGCTTCGTGGTAG | 57.076 | 32.000 | 0.00 | 0.00 | 0.00 | 3.18 |
219 | 220 | 5.972382 | TGCGTAAAACTTAAATTTGCTTCGT | 59.028 | 32.000 | 0.00 | 0.00 | 0.00 | 3.85 |
220 | 221 | 6.075310 | TGTGCGTAAAACTTAAATTTGCTTCG | 60.075 | 34.615 | 0.00 | 0.00 | 0.00 | 3.79 |
221 | 222 | 7.155858 | TGTGCGTAAAACTTAAATTTGCTTC | 57.844 | 32.000 | 0.00 | 0.00 | 0.00 | 3.86 |
222 | 223 | 7.527084 | TTGTGCGTAAAACTTAAATTTGCTT | 57.473 | 28.000 | 0.00 | 0.00 | 0.00 | 3.91 |
223 | 224 | 7.707774 | ATTGTGCGTAAAACTTAAATTTGCT | 57.292 | 28.000 | 0.00 | 0.00 | 0.00 | 3.91 |
228 | 229 | 9.349145 | GTCCATAATTGTGCGTAAAACTTAAAT | 57.651 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
229 | 230 | 8.350722 | TGTCCATAATTGTGCGTAAAACTTAAA | 58.649 | 29.630 | 0.00 | 0.00 | 0.00 | 1.52 |
230 | 231 | 7.872881 | TGTCCATAATTGTGCGTAAAACTTAA | 58.127 | 30.769 | 0.00 | 0.00 | 0.00 | 1.85 |
234 | 235 | 5.793457 | GTCTGTCCATAATTGTGCGTAAAAC | 59.207 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
235 | 236 | 5.390040 | CGTCTGTCCATAATTGTGCGTAAAA | 60.390 | 40.000 | 0.00 | 0.00 | 0.00 | 1.52 |
236 | 237 | 4.092237 | CGTCTGTCCATAATTGTGCGTAAA | 59.908 | 41.667 | 0.00 | 0.00 | 0.00 | 2.01 |
237 | 238 | 3.615056 | CGTCTGTCCATAATTGTGCGTAA | 59.385 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
240 | 241 | 2.267426 | TCGTCTGTCCATAATTGTGCG | 58.733 | 47.619 | 0.00 | 0.00 | 0.00 | 5.34 |
241 | 242 | 3.684788 | ACTTCGTCTGTCCATAATTGTGC | 59.315 | 43.478 | 0.00 | 0.00 | 0.00 | 4.57 |
242 | 243 | 6.961359 | TTACTTCGTCTGTCCATAATTGTG | 57.039 | 37.500 | 0.00 | 0.00 | 0.00 | 3.33 |
244 | 245 | 6.594159 | AGGTTTACTTCGTCTGTCCATAATTG | 59.406 | 38.462 | 0.00 | 0.00 | 0.00 | 2.32 |
247 | 248 | 5.733620 | AGGTTTACTTCGTCTGTCCATAA | 57.266 | 39.130 | 0.00 | 0.00 | 0.00 | 1.90 |
248 | 249 | 5.126061 | GGTAGGTTTACTTCGTCTGTCCATA | 59.874 | 44.000 | 0.00 | 0.00 | 0.00 | 2.74 |
249 | 250 | 4.081807 | GGTAGGTTTACTTCGTCTGTCCAT | 60.082 | 45.833 | 0.00 | 0.00 | 0.00 | 3.41 |
250 | 251 | 3.256631 | GGTAGGTTTACTTCGTCTGTCCA | 59.743 | 47.826 | 0.00 | 0.00 | 0.00 | 4.02 |
251 | 252 | 3.367806 | GGGTAGGTTTACTTCGTCTGTCC | 60.368 | 52.174 | 0.00 | 0.00 | 0.00 | 4.02 |
252 | 253 | 3.509184 | AGGGTAGGTTTACTTCGTCTGTC | 59.491 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
256 | 257 | 3.434641 | GCAAAGGGTAGGTTTACTTCGTC | 59.565 | 47.826 | 0.00 | 0.00 | 0.00 | 4.20 |
258 | 259 | 3.404899 | TGCAAAGGGTAGGTTTACTTCG | 58.595 | 45.455 | 0.00 | 0.00 | 0.00 | 3.79 |
259 | 260 | 3.190744 | GCTGCAAAGGGTAGGTTTACTTC | 59.809 | 47.826 | 0.00 | 0.00 | 0.00 | 3.01 |
261 | 262 | 2.554564 | GGCTGCAAAGGGTAGGTTTACT | 60.555 | 50.000 | 0.50 | 0.00 | 0.00 | 2.24 |
429 | 992 | 3.795623 | TCCGTGGATGTAGTAAAGCTC | 57.204 | 47.619 | 0.00 | 0.00 | 0.00 | 4.09 |
432 | 995 | 6.854892 | CGTAACTATCCGTGGATGTAGTAAAG | 59.145 | 42.308 | 11.68 | 1.74 | 36.17 | 1.85 |
433 | 996 | 6.238731 | CCGTAACTATCCGTGGATGTAGTAAA | 60.239 | 42.308 | 11.68 | 0.00 | 36.17 | 2.01 |
434 | 997 | 5.239306 | CCGTAACTATCCGTGGATGTAGTAA | 59.761 | 44.000 | 11.68 | 0.00 | 36.17 | 2.24 |
436 | 999 | 3.567164 | CCGTAACTATCCGTGGATGTAGT | 59.433 | 47.826 | 11.68 | 5.17 | 36.17 | 2.73 |
438 | 1001 | 2.886523 | CCCGTAACTATCCGTGGATGTA | 59.113 | 50.000 | 11.68 | 0.00 | 36.17 | 2.29 |
439 | 1002 | 1.684983 | CCCGTAACTATCCGTGGATGT | 59.315 | 52.381 | 11.68 | 5.12 | 36.17 | 3.06 |
440 | 1003 | 1.000506 | CCCCGTAACTATCCGTGGATG | 59.999 | 57.143 | 11.68 | 4.53 | 36.17 | 3.51 |
441 | 1004 | 1.335145 | CCCCGTAACTATCCGTGGAT | 58.665 | 55.000 | 6.63 | 6.63 | 38.54 | 3.41 |
442 | 1005 | 0.756442 | CCCCCGTAACTATCCGTGGA | 60.756 | 60.000 | 0.00 | 0.00 | 0.00 | 4.02 |
458 | 1021 | 4.435970 | CCAGGCCCGTAAACCCCC | 62.436 | 72.222 | 0.00 | 0.00 | 0.00 | 5.40 |
459 | 1022 | 3.633609 | GACCAGGCCCGTAAACCCC | 62.634 | 68.421 | 0.00 | 0.00 | 0.00 | 4.95 |
460 | 1023 | 2.045634 | GACCAGGCCCGTAAACCC | 60.046 | 66.667 | 0.00 | 0.00 | 0.00 | 4.11 |
461 | 1024 | 1.673337 | GTGACCAGGCCCGTAAACC | 60.673 | 63.158 | 0.00 | 0.00 | 0.00 | 3.27 |
462 | 1025 | 1.673337 | GGTGACCAGGCCCGTAAAC | 60.673 | 63.158 | 0.00 | 0.00 | 0.00 | 2.01 |
463 | 1026 | 2.751688 | GGTGACCAGGCCCGTAAA | 59.248 | 61.111 | 0.00 | 0.00 | 0.00 | 2.01 |
475 | 1038 | 1.774894 | TAACTGGTGGGCTGGGTGAC | 61.775 | 60.000 | 0.00 | 0.00 | 0.00 | 3.67 |
476 | 1039 | 1.063070 | TTAACTGGTGGGCTGGGTGA | 61.063 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
480 | 1043 | 1.472480 | CGATTTTAACTGGTGGGCTGG | 59.528 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
481 | 1044 | 1.472480 | CCGATTTTAACTGGTGGGCTG | 59.528 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
482 | 1045 | 1.615919 | CCCGATTTTAACTGGTGGGCT | 60.616 | 52.381 | 0.00 | 0.00 | 0.00 | 5.19 |
483 | 1046 | 0.815095 | CCCGATTTTAACTGGTGGGC | 59.185 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
484 | 1047 | 1.470051 | CCCCGATTTTAACTGGTGGG | 58.530 | 55.000 | 0.00 | 0.00 | 34.87 | 4.61 |
501 | 1064 | 0.035739 | TCCTAATTAATCGCGCCCCC | 59.964 | 55.000 | 0.00 | 0.00 | 0.00 | 5.40 |
502 | 1065 | 1.001633 | TCTCCTAATTAATCGCGCCCC | 59.998 | 52.381 | 0.00 | 0.00 | 0.00 | 5.80 |
503 | 1066 | 2.450609 | TCTCCTAATTAATCGCGCCC | 57.549 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
504 | 1067 | 2.737252 | CCTTCTCCTAATTAATCGCGCC | 59.263 | 50.000 | 0.00 | 0.00 | 0.00 | 6.53 |
505 | 1068 | 3.650139 | TCCTTCTCCTAATTAATCGCGC | 58.350 | 45.455 | 0.00 | 0.00 | 0.00 | 6.86 |
506 | 1069 | 5.122512 | TCTCCTTCTCCTAATTAATCGCG | 57.877 | 43.478 | 0.00 | 0.00 | 0.00 | 5.87 |
507 | 1070 | 9.660180 | ATTAATCTCCTTCTCCTAATTAATCGC | 57.340 | 33.333 | 0.00 | 0.00 | 28.25 | 4.58 |
533 | 1096 | 9.567776 | TGAGTTGTCCTGTTTTAATTCATCTAA | 57.432 | 29.630 | 0.00 | 0.00 | 0.00 | 2.10 |
535 | 1098 | 7.308830 | GCTGAGTTGTCCTGTTTTAATTCATCT | 60.309 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
536 | 1099 | 6.803807 | GCTGAGTTGTCCTGTTTTAATTCATC | 59.196 | 38.462 | 0.00 | 0.00 | 0.00 | 2.92 |
537 | 1100 | 6.265196 | TGCTGAGTTGTCCTGTTTTAATTCAT | 59.735 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
539 | 1102 | 6.072112 | TGCTGAGTTGTCCTGTTTTAATTC | 57.928 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
540 | 1103 | 5.010012 | CCTGCTGAGTTGTCCTGTTTTAATT | 59.990 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
541 | 1104 | 4.520492 | CCTGCTGAGTTGTCCTGTTTTAAT | 59.480 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
542 | 1105 | 3.882888 | CCTGCTGAGTTGTCCTGTTTTAA | 59.117 | 43.478 | 0.00 | 0.00 | 0.00 | 1.52 |
543 | 1106 | 3.118038 | ACCTGCTGAGTTGTCCTGTTTTA | 60.118 | 43.478 | 0.00 | 0.00 | 0.00 | 1.52 |
544 | 1107 | 2.301346 | CCTGCTGAGTTGTCCTGTTTT | 58.699 | 47.619 | 0.00 | 0.00 | 0.00 | 2.43 |
546 | 1109 | 0.839946 | ACCTGCTGAGTTGTCCTGTT | 59.160 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
547 | 1110 | 0.394565 | GACCTGCTGAGTTGTCCTGT | 59.605 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
549 | 1112 | 1.821061 | CGGACCTGCTGAGTTGTCCT | 61.821 | 60.000 | 12.82 | 0.00 | 44.08 | 3.85 |
550 | 1113 | 1.374758 | CGGACCTGCTGAGTTGTCC | 60.375 | 63.158 | 6.99 | 6.99 | 43.07 | 4.02 |
551 | 1114 | 0.601558 | TACGGACCTGCTGAGTTGTC | 59.398 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
552 | 1115 | 1.045407 | TTACGGACCTGCTGAGTTGT | 58.955 | 50.000 | 0.00 | 0.00 | 0.00 | 3.32 |
553 | 1116 | 2.069273 | CTTTACGGACCTGCTGAGTTG | 58.931 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
554 | 1117 | 1.692519 | ACTTTACGGACCTGCTGAGTT | 59.307 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
555 | 1118 | 1.272769 | GACTTTACGGACCTGCTGAGT | 59.727 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
556 | 1119 | 1.546476 | AGACTTTACGGACCTGCTGAG | 59.454 | 52.381 | 0.00 | 0.00 | 0.00 | 3.35 |
560 | 1123 | 1.000506 | TCACAGACTTTACGGACCTGC | 59.999 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
561 | 1124 | 2.352814 | CCTCACAGACTTTACGGACCTG | 60.353 | 54.545 | 0.00 | 0.00 | 0.00 | 4.00 |
562 | 1125 | 1.893801 | CCTCACAGACTTTACGGACCT | 59.106 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
563 | 1126 | 1.617357 | ACCTCACAGACTTTACGGACC | 59.383 | 52.381 | 0.00 | 0.00 | 0.00 | 4.46 |
564 | 1127 | 2.609737 | CCACCTCACAGACTTTACGGAC | 60.610 | 54.545 | 0.00 | 0.00 | 0.00 | 4.79 |
565 | 1128 | 1.616865 | CCACCTCACAGACTTTACGGA | 59.383 | 52.381 | 0.00 | 0.00 | 0.00 | 4.69 |
567 | 1130 | 1.616865 | TCCCACCTCACAGACTTTACG | 59.383 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
568 | 1131 | 2.633481 | ACTCCCACCTCACAGACTTTAC | 59.367 | 50.000 | 0.00 | 0.00 | 0.00 | 2.01 |
569 | 1132 | 2.897969 | GACTCCCACCTCACAGACTTTA | 59.102 | 50.000 | 0.00 | 0.00 | 0.00 | 1.85 |
573 | 1136 | 1.878656 | CGGACTCCCACCTCACAGAC | 61.879 | 65.000 | 0.00 | 0.00 | 0.00 | 3.51 |
574 | 1137 | 1.606601 | CGGACTCCCACCTCACAGA | 60.607 | 63.158 | 0.00 | 0.00 | 0.00 | 3.41 |
578 | 1141 | 2.200370 | ACACGGACTCCCACCTCA | 59.800 | 61.111 | 0.00 | 0.00 | 0.00 | 3.86 |
579 | 1142 | 2.207924 | ACACACGGACTCCCACCTC | 61.208 | 63.158 | 0.00 | 0.00 | 0.00 | 3.85 |
580 | 1143 | 2.122989 | ACACACGGACTCCCACCT | 60.123 | 61.111 | 0.00 | 0.00 | 0.00 | 4.00 |
581 | 1144 | 1.466025 | TACACACACGGACTCCCACC | 61.466 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
582 | 1145 | 0.038526 | CTACACACACGGACTCCCAC | 60.039 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
583 | 1146 | 1.812686 | GCTACACACACGGACTCCCA | 61.813 | 60.000 | 0.00 | 0.00 | 0.00 | 4.37 |
584 | 1147 | 1.080025 | GCTACACACACGGACTCCC | 60.080 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
585 | 1148 | 0.246635 | ATGCTACACACACGGACTCC | 59.753 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
587 | 1150 | 2.543777 | AAATGCTACACACACGGACT | 57.456 | 45.000 | 0.00 | 0.00 | 0.00 | 3.85 |
588 | 1151 | 3.242936 | ACAAAAATGCTACACACACGGAC | 60.243 | 43.478 | 0.00 | 0.00 | 0.00 | 4.79 |
589 | 1152 | 2.946329 | ACAAAAATGCTACACACACGGA | 59.054 | 40.909 | 0.00 | 0.00 | 0.00 | 4.69 |
590 | 1153 | 3.347958 | ACAAAAATGCTACACACACGG | 57.652 | 42.857 | 0.00 | 0.00 | 0.00 | 4.94 |
591 | 1154 | 4.101942 | ACAACAAAAATGCTACACACACG | 58.898 | 39.130 | 0.00 | 0.00 | 0.00 | 4.49 |
592 | 1155 | 7.513190 | TTAACAACAAAAATGCTACACACAC | 57.487 | 32.000 | 0.00 | 0.00 | 0.00 | 3.82 |
600 | 1163 | 8.711457 | GCATGTCTAATTAACAACAAAAATGCT | 58.289 | 29.630 | 0.00 | 0.00 | 0.00 | 3.79 |
601 | 1164 | 8.494347 | TGCATGTCTAATTAACAACAAAAATGC | 58.506 | 29.630 | 0.00 | 0.00 | 0.00 | 3.56 |
604 | 1167 | 8.494347 | GCATGCATGTCTAATTAACAACAAAAA | 58.506 | 29.630 | 26.79 | 0.00 | 0.00 | 1.94 |
605 | 1168 | 7.654923 | TGCATGCATGTCTAATTAACAACAAAA | 59.345 | 29.630 | 26.79 | 0.00 | 0.00 | 2.44 |
606 | 1169 | 7.116090 | GTGCATGCATGTCTAATTAACAACAAA | 59.884 | 33.333 | 25.64 | 0.00 | 0.00 | 2.83 |
608 | 1171 | 6.072008 | AGTGCATGCATGTCTAATTAACAACA | 60.072 | 34.615 | 25.64 | 9.33 | 0.00 | 3.33 |
609 | 1172 | 6.324819 | AGTGCATGCATGTCTAATTAACAAC | 58.675 | 36.000 | 25.64 | 4.61 | 0.00 | 3.32 |
610 | 1173 | 6.513806 | AGTGCATGCATGTCTAATTAACAA | 57.486 | 33.333 | 25.64 | 0.00 | 0.00 | 2.83 |
611 | 1174 | 7.047271 | TCTAGTGCATGCATGTCTAATTAACA | 58.953 | 34.615 | 25.64 | 10.74 | 0.00 | 2.41 |
781 | 2257 | 2.514458 | AGTCAAAGGTTGGCTATGGG | 57.486 | 50.000 | 0.00 | 0.00 | 45.27 | 4.00 |
787 | 2263 | 0.673985 | GTTGGGAGTCAAAGGTTGGC | 59.326 | 55.000 | 0.00 | 0.00 | 37.08 | 4.52 |
788 | 2264 | 2.158608 | AGAGTTGGGAGTCAAAGGTTGG | 60.159 | 50.000 | 0.00 | 0.00 | 37.08 | 3.77 |
954 | 2473 | 0.669318 | CCACGCTACGCTTTCTTCCA | 60.669 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
1284 | 2816 | 2.826738 | AGCGACTCGAGCCTCTCC | 60.827 | 66.667 | 13.61 | 0.00 | 34.64 | 3.71 |
1326 | 2858 | 1.000612 | GGTCGGGAAGGAGAGGTCT | 59.999 | 63.158 | 0.00 | 0.00 | 0.00 | 3.85 |
1455 | 3032 | 3.151958 | GATCTTAGCGGCCGCCTCA | 62.152 | 63.158 | 44.47 | 28.22 | 43.17 | 3.86 |
1853 | 3727 | 9.361315 | TGATCATTTTAGATTGCAATCAAGTTG | 57.639 | 29.630 | 34.59 | 24.54 | 40.90 | 3.16 |
1900 | 3822 | 5.565592 | TGCAGATGAACGAAAAGCAATAT | 57.434 | 34.783 | 0.00 | 0.00 | 0.00 | 1.28 |
1940 | 3867 | 5.645056 | AAAAACATTGTTTCCCTTCCCAT | 57.355 | 34.783 | 14.80 | 0.00 | 0.00 | 4.00 |
2133 | 4414 | 7.759489 | TTAAAGGCATGTTCAACAGAGTATT | 57.241 | 32.000 | 0.00 | 0.00 | 0.00 | 1.89 |
2142 | 4423 | 5.212532 | ACAGCATTTAAAGGCATGTTCAA | 57.787 | 34.783 | 25.04 | 0.00 | 38.35 | 2.69 |
2145 | 4426 | 5.421693 | TCCATACAGCATTTAAAGGCATGTT | 59.578 | 36.000 | 25.04 | 13.54 | 38.35 | 2.71 |
2157 | 4438 | 4.652881 | TCACAGAGAGATCCATACAGCATT | 59.347 | 41.667 | 0.00 | 0.00 | 0.00 | 3.56 |
2186 | 4468 | 5.419239 | GGAACCCCATTTGAATTCATGAA | 57.581 | 39.130 | 11.26 | 11.26 | 0.00 | 2.57 |
2245 | 4550 | 9.141400 | GTAAACTGTGTGAACCATTTACAAAAA | 57.859 | 29.630 | 0.00 | 0.00 | 34.28 | 1.94 |
2373 | 4704 | 7.801716 | TGGCTTGTTTACATATTCCTACATC | 57.198 | 36.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2439 | 4797 | 5.063204 | TCCAATGGCGTAGGAATATTTCTG | 58.937 | 41.667 | 6.51 | 0.00 | 0.00 | 3.02 |
2450 | 4890 | 1.336887 | CGTAGGGATCCAATGGCGTAG | 60.337 | 57.143 | 15.23 | 0.00 | 0.00 | 3.51 |
2508 | 4954 | 2.550606 | GCATCGGCGGAAAATATTGGTA | 59.449 | 45.455 | 7.21 | 0.00 | 0.00 | 3.25 |
2521 | 4967 | 3.545481 | GACACGTCTGCATCGGCG | 61.545 | 66.667 | 0.00 | 0.00 | 45.35 | 6.46 |
2533 | 4979 | 3.844657 | CACGCTACTGTACTTAAGACACG | 59.155 | 47.826 | 10.09 | 10.67 | 0.00 | 4.49 |
2647 | 5600 | 5.330455 | TCAAGTAGGAGTATGACAAGCAG | 57.670 | 43.478 | 0.00 | 0.00 | 0.00 | 4.24 |
2684 | 5637 | 5.486526 | CAGCCAGAAAGTGAGAATAGTCTT | 58.513 | 41.667 | 0.00 | 0.00 | 32.80 | 3.01 |
2689 | 5642 | 2.621338 | CGCAGCCAGAAAGTGAGAATA | 58.379 | 47.619 | 0.00 | 0.00 | 0.00 | 1.75 |
2713 | 5666 | 4.944619 | ATGACTGCTACTGCTATGCTTA | 57.055 | 40.909 | 0.00 | 0.00 | 40.48 | 3.09 |
2746 | 5706 | 2.813172 | TCAGCATGCGAAACATCTTCAA | 59.187 | 40.909 | 13.01 | 0.00 | 36.64 | 2.69 |
2747 | 5707 | 2.425539 | TCAGCATGCGAAACATCTTCA | 58.574 | 42.857 | 13.01 | 0.00 | 36.64 | 3.02 |
2751 | 5711 | 2.907910 | ACTTCAGCATGCGAAACATC | 57.092 | 45.000 | 20.08 | 0.00 | 36.64 | 3.06 |
2881 | 8350 | 6.200475 | GGTACGCATAGACTTTCTACAAATCC | 59.800 | 42.308 | 0.00 | 0.00 | 30.79 | 3.01 |
2937 | 8410 | 5.827326 | AGGATAATTCAGGTAGGCCTAAC | 57.173 | 43.478 | 21.00 | 21.00 | 44.97 | 2.34 |
2957 | 8436 | 3.865745 | CGTGTTTCTTCTGCTACCATAGG | 59.134 | 47.826 | 0.00 | 0.00 | 0.00 | 2.57 |
3182 | 8683 | 1.654954 | CTGCCTGCTGCTGCCTAAAG | 61.655 | 60.000 | 13.47 | 3.46 | 42.00 | 1.85 |
3258 | 8829 | 8.593492 | AAGGTTTAACTTCAAATCTTCAATGC | 57.407 | 30.769 | 0.00 | 0.00 | 34.48 | 3.56 |
3275 | 9194 | 8.415950 | AATGTTGTCATGGTGATAAGGTTTAA | 57.584 | 30.769 | 0.00 | 0.00 | 34.19 | 1.52 |
3277 | 9196 | 6.916360 | AATGTTGTCATGGTGATAAGGTTT | 57.084 | 33.333 | 0.00 | 0.00 | 34.19 | 3.27 |
3347 | 9267 | 7.700505 | TGAAAAGCTCTGCTGATGTATTATTG | 58.299 | 34.615 | 0.00 | 0.00 | 39.62 | 1.90 |
3348 | 9268 | 7.870509 | TGAAAAGCTCTGCTGATGTATTATT | 57.129 | 32.000 | 0.00 | 0.00 | 39.62 | 1.40 |
3380 | 9300 | 6.489361 | ACTTGTGAGAGAGAAAATCAAAGCAT | 59.511 | 34.615 | 0.00 | 0.00 | 0.00 | 3.79 |
3382 | 9302 | 6.311055 | ACTTGTGAGAGAGAAAATCAAAGC | 57.689 | 37.500 | 0.00 | 0.00 | 0.00 | 3.51 |
3395 | 9317 | 8.186178 | ACAATAATTTAGCGTACTTGTGAGAG | 57.814 | 34.615 | 0.00 | 0.00 | 0.00 | 3.20 |
3397 | 9319 | 7.692291 | CCAACAATAATTTAGCGTACTTGTGAG | 59.308 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
3398 | 9320 | 7.523219 | CCAACAATAATTTAGCGTACTTGTGA | 58.477 | 34.615 | 0.00 | 0.00 | 0.00 | 3.58 |
3399 | 9321 | 6.250527 | GCCAACAATAATTTAGCGTACTTGTG | 59.749 | 38.462 | 0.00 | 0.00 | 0.00 | 3.33 |
3400 | 9322 | 6.150474 | AGCCAACAATAATTTAGCGTACTTGT | 59.850 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
3401 | 9323 | 6.551736 | AGCCAACAATAATTTAGCGTACTTG | 58.448 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
3440 | 9366 | 1.473258 | ACAGCAAGTGCAGGAAACAA | 58.527 | 45.000 | 6.00 | 0.00 | 45.16 | 2.83 |
3472 | 9398 | 2.536803 | GCATTACGCGAAAACGATAGGA | 59.463 | 45.455 | 15.93 | 0.00 | 43.77 | 2.94 |
3473 | 9399 | 2.887733 | GCATTACGCGAAAACGATAGG | 58.112 | 47.619 | 15.93 | 0.00 | 43.77 | 2.57 |
3657 | 9598 | 0.723414 | CGGTGCTGCAGACAGTAATG | 59.277 | 55.000 | 20.43 | 0.00 | 46.30 | 1.90 |
3709 | 9650 | 3.991051 | ACGGGTGAGCTGTCCACG | 61.991 | 66.667 | 0.00 | 2.18 | 35.48 | 4.94 |
3717 | 9658 | 0.527817 | CTATCGTTCCACGGGTGAGC | 60.528 | 60.000 | 0.00 | 0.00 | 42.81 | 4.26 |
3739 | 9680 | 5.355596 | GGAGTTCTGTCCATGAATCACTAG | 58.644 | 45.833 | 0.00 | 0.00 | 36.51 | 2.57 |
3748 | 9689 | 0.460987 | GAGGCGGAGTTCTGTCCATG | 60.461 | 60.000 | 0.00 | 0.00 | 36.23 | 3.66 |
3749 | 9690 | 1.901085 | GAGGCGGAGTTCTGTCCAT | 59.099 | 57.895 | 0.00 | 0.00 | 36.23 | 3.41 |
3750 | 9691 | 2.636412 | CGAGGCGGAGTTCTGTCCA | 61.636 | 63.158 | 0.00 | 0.00 | 36.23 | 4.02 |
3751 | 9692 | 2.182030 | CGAGGCGGAGTTCTGTCC | 59.818 | 66.667 | 0.00 | 0.00 | 0.00 | 4.02 |
3753 | 9694 | 2.651361 | CACGAGGCGGAGTTCTGT | 59.349 | 61.111 | 0.00 | 0.00 | 0.00 | 3.41 |
3754 | 9695 | 2.125912 | CCACGAGGCGGAGTTCTG | 60.126 | 66.667 | 0.00 | 0.00 | 0.00 | 3.02 |
3755 | 9696 | 1.906824 | TTCCACGAGGCGGAGTTCT | 60.907 | 57.895 | 0.00 | 0.00 | 33.01 | 3.01 |
3796 | 9739 | 6.770785 | CCTCGACTTCCATTGGGATAAATAAA | 59.229 | 38.462 | 2.09 | 0.00 | 44.48 | 1.40 |
3797 | 9740 | 6.126594 | ACCTCGACTTCCATTGGGATAAATAA | 60.127 | 38.462 | 2.09 | 0.00 | 44.48 | 1.40 |
3798 | 9741 | 5.368523 | ACCTCGACTTCCATTGGGATAAATA | 59.631 | 40.000 | 2.09 | 0.00 | 44.48 | 1.40 |
3799 | 9742 | 4.166144 | ACCTCGACTTCCATTGGGATAAAT | 59.834 | 41.667 | 2.09 | 0.00 | 44.48 | 1.40 |
3843 | 9786 | 3.768757 | CCAAAAATCACCTTGCCTCCATA | 59.231 | 43.478 | 0.00 | 0.00 | 0.00 | 2.74 |
3850 | 9793 | 2.078392 | CATGCCCAAAAATCACCTTGC | 58.922 | 47.619 | 0.00 | 0.00 | 0.00 | 4.01 |
3928 | 9871 | 1.247567 | ATCCGAGCTTGGTTTTGGTG | 58.752 | 50.000 | 19.96 | 0.00 | 0.00 | 4.17 |
3955 | 9898 | 0.611714 | TCGCCCAAACCTCTCTTACC | 59.388 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
3957 | 9900 | 4.163458 | ACATATTCGCCCAAACCTCTCTTA | 59.837 | 41.667 | 0.00 | 0.00 | 0.00 | 2.10 |
3961 | 9904 | 2.643551 | CACATATTCGCCCAAACCTCT | 58.356 | 47.619 | 0.00 | 0.00 | 0.00 | 3.69 |
3964 | 9907 | 0.102300 | GCCACATATTCGCCCAAACC | 59.898 | 55.000 | 0.00 | 0.00 | 0.00 | 3.27 |
3966 | 9909 | 1.550327 | TTGCCACATATTCGCCCAAA | 58.450 | 45.000 | 0.00 | 0.00 | 0.00 | 3.28 |
4193 | 10144 | 7.063308 | GTCATACCAAAGCCAATTTGTACATTG | 59.937 | 37.037 | 0.00 | 0.00 | 45.78 | 2.82 |
4354 | 10305 | 5.432157 | CATTAAACATGAACGACTATCGGC | 58.568 | 41.667 | 0.00 | 0.00 | 45.59 | 5.54 |
4360 | 10311 | 7.792374 | ATGATAGCATTAAACATGAACGACT | 57.208 | 32.000 | 0.00 | 0.00 | 0.00 | 4.18 |
4387 | 10338 | 5.769662 | TCAATCTCTCTCAGATCTAGGCTTC | 59.230 | 44.000 | 0.00 | 0.00 | 41.47 | 3.86 |
4395 | 10346 | 4.261155 | CGTGAGGTCAATCTCTCTCAGATC | 60.261 | 50.000 | 0.00 | 0.00 | 41.47 | 2.75 |
4417 | 10368 | 1.663695 | CCAAGTGTATTGCCTACCCG | 58.336 | 55.000 | 0.00 | 0.00 | 0.00 | 5.28 |
4494 | 10445 | 6.126507 | ACCAGAGGAAAATTTTGTTCCCATTT | 60.127 | 34.615 | 8.47 | 0.00 | 44.90 | 2.32 |
4508 | 10459 | 4.141287 | CACACACCATTACCAGAGGAAAA | 58.859 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
4517 | 10468 | 2.144730 | TGTAACGCACACACCATTACC | 58.855 | 47.619 | 0.00 | 0.00 | 30.04 | 2.85 |
4518 | 10469 | 3.881780 | TTGTAACGCACACACCATTAC | 57.118 | 42.857 | 0.00 | 0.00 | 36.69 | 1.89 |
4520 | 10471 | 2.946329 | TCTTTGTAACGCACACACCATT | 59.054 | 40.909 | 0.00 | 0.00 | 36.69 | 3.16 |
4522 | 10473 | 1.937223 | CTCTTTGTAACGCACACACCA | 59.063 | 47.619 | 0.00 | 0.00 | 36.69 | 4.17 |
4523 | 10474 | 1.263217 | CCTCTTTGTAACGCACACACC | 59.737 | 52.381 | 0.00 | 0.00 | 36.69 | 4.16 |
4527 | 10478 | 5.580691 | CAGATATTCCTCTTTGTAACGCACA | 59.419 | 40.000 | 0.00 | 0.00 | 34.51 | 4.57 |
4531 | 10482 | 7.827819 | TTGTCAGATATTCCTCTTTGTAACG | 57.172 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
4554 | 10505 | 3.094484 | TCAACAAGAAGGGGTGTGTTT | 57.906 | 42.857 | 0.00 | 0.00 | 31.98 | 2.83 |
4586 | 10537 | 4.125703 | GTTTTTGTTTCCATGATGCACCA | 58.874 | 39.130 | 0.00 | 0.00 | 0.00 | 4.17 |
4589 | 10540 | 5.856156 | AGATGTTTTTGTTTCCATGATGCA | 58.144 | 33.333 | 0.00 | 0.00 | 0.00 | 3.96 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.