Multiple sequence alignment - TraesCS7D01G207300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G207300 chr7D 100.000 6644 0 0 1 6644 164744533 164751176 0.000000e+00 12270.0
1 TraesCS7D01G207300 chr7D 87.150 428 18 10 6224 6633 165120132 165119724 1.020000e-122 451.0
2 TraesCS7D01G207300 chr7D 91.379 232 15 5 6353 6583 169448651 169448878 5.000000e-81 313.0
3 TraesCS7D01G207300 chr7D 86.395 294 28 7 4209 4492 638501194 638500903 1.800000e-80 311.0
4 TraesCS7D01G207300 chr7D 94.898 196 10 0 3369 3564 546536089 546535894 2.330000e-79 307.0
5 TraesCS7D01G207300 chr7D 93.407 91 0 2 4490 4576 638500742 638500654 5.410000e-26 130.0
6 TraesCS7D01G207300 chr7D 88.679 106 10 2 350 454 35195904 35195800 1.940000e-25 128.0
7 TraesCS7D01G207300 chr7A 93.297 2924 131 22 493 3359 166483138 166486053 0.000000e+00 4253.0
8 TraesCS7D01G207300 chr7A 90.172 1048 55 19 4943 5986 166487488 166488491 0.000000e+00 1321.0
9 TraesCS7D01G207300 chr7A 89.301 701 36 11 3559 4244 166486363 166487039 0.000000e+00 843.0
10 TraesCS7D01G207300 chr7A 97.059 374 10 1 4349 4721 166487045 166487418 4.370000e-176 628.0
11 TraesCS7D01G207300 chr7A 87.429 525 29 14 6136 6633 166871423 166870909 2.690000e-158 569.0
12 TraesCS7D01G207300 chr7A 85.455 440 59 5 25 461 620930517 620930954 2.820000e-123 453.0
13 TraesCS7D01G207300 chr7A 85.961 406 50 3 60 458 166481307 166481712 1.710000e-115 427.0
14 TraesCS7D01G207300 chr7A 83.501 497 43 17 6161 6633 171555603 171556084 1.710000e-115 427.0
15 TraesCS7D01G207300 chr7A 89.443 341 19 9 6136 6460 166488973 166489312 1.330000e-111 414.0
16 TraesCS7D01G207300 chr7A 82.317 492 55 15 6155 6628 166593816 166594293 1.340000e-106 398.0
17 TraesCS7D01G207300 chr7A 85.422 391 39 12 4200 4576 727410320 727410706 2.250000e-104 390.0
18 TraesCS7D01G207300 chr7A 87.931 290 24 8 6350 6633 171546743 171547027 1.380000e-86 331.0
19 TraesCS7D01G207300 chr7A 92.000 150 8 3 4799 4946 342144492 342144345 2.430000e-49 207.0
20 TraesCS7D01G207300 chr7A 88.462 78 7 2 1041 1118 117639331 117639406 7.090000e-15 93.5
21 TraesCS7D01G207300 chr7A 90.909 66 6 0 6179 6244 166872730 166872665 9.180000e-14 89.8
22 TraesCS7D01G207300 chr7B 94.947 2652 78 18 743 3359 127645446 127648076 0.000000e+00 4104.0
23 TraesCS7D01G207300 chr7B 92.359 1047 52 14 5076 6117 127650075 127651098 0.000000e+00 1465.0
24 TraesCS7D01G207300 chr7B 95.324 834 22 5 3559 4377 127648382 127649213 0.000000e+00 1308.0
25 TraesCS7D01G207300 chr7B 98.408 377 3 3 4445 4819 127649452 127649827 0.000000e+00 660.0
26 TraesCS7D01G207300 chr7B 90.179 448 29 9 6136 6577 128438772 128438334 2.690000e-158 569.0
27 TraesCS7D01G207300 chr7B 96.491 285 3 1 6349 6633 127651432 127651709 1.300000e-126 464.0
28 TraesCS7D01G207300 chr7B 86.161 448 40 13 6202 6633 134494190 134493749 1.300000e-126 464.0
29 TraesCS7D01G207300 chr7B 78.571 714 81 36 60 757 127644770 127645427 8.020000e-109 405.0
30 TraesCS7D01G207300 chr7B 94.326 141 8 0 4804 4944 79399517 79399657 4.030000e-52 217.0
31 TraesCS7D01G207300 chr7B 89.691 97 10 0 2484 2580 583606180 583606084 2.520000e-24 124.0
32 TraesCS7D01G207300 chr7B 98.148 54 1 0 4367 4420 127649396 127649449 1.970000e-15 95.3
33 TraesCS7D01G207300 chr7B 100.000 30 0 0 1 30 308816684 308816713 1.000000e-03 56.5
34 TraesCS7D01G207300 chrUn 83.501 497 43 17 6161 6633 82713546 82714027 1.710000e-115 427.0
35 TraesCS7D01G207300 chrUn 87.931 290 24 8 6350 6633 309085806 309086090 1.380000e-86 331.0
36 TraesCS7D01G207300 chrUn 89.216 102 9 2 2480 2579 718173 718274 6.990000e-25 126.0
37 TraesCS7D01G207300 chrUn 89.216 102 9 2 2480 2579 229408794 229408693 6.990000e-25 126.0
38 TraesCS7D01G207300 chrUn 100.000 29 0 0 1 29 6591767 6591739 3.000000e-03 54.7
39 TraesCS7D01G207300 chrUn 100.000 29 0 0 1 29 46499383 46499411 3.000000e-03 54.7
40 TraesCS7D01G207300 chrUn 100.000 29 0 0 1 29 85228236 85228208 3.000000e-03 54.7
41 TraesCS7D01G207300 chrUn 100.000 29 0 0 1 29 85488558 85488530 3.000000e-03 54.7
42 TraesCS7D01G207300 chrUn 100.000 29 0 0 1 29 109873009 109873037 3.000000e-03 54.7
43 TraesCS7D01G207300 chrUn 100.000 29 0 0 1 29 109881017 109881045 3.000000e-03 54.7
44 TraesCS7D01G207300 chrUn 100.000 29 0 0 1 29 109893811 109893839 3.000000e-03 54.7
45 TraesCS7D01G207300 chrUn 100.000 29 0 0 1 29 110066682 110066654 3.000000e-03 54.7
46 TraesCS7D01G207300 chrUn 100.000 29 0 0 1 29 114039828 114039856 3.000000e-03 54.7
47 TraesCS7D01G207300 chrUn 94.286 35 0 2 1 34 110176620 110176587 1.200000e-02 52.8
48 TraesCS7D01G207300 chr5B 85.036 421 49 12 52 462 221907143 221907559 3.710000e-112 416.0
49 TraesCS7D01G207300 chr5B 80.465 430 74 6 41 462 427841609 427842036 2.990000e-83 320.0
50 TraesCS7D01G207300 chr5B 80.580 345 52 12 25 356 304817954 304817612 1.110000e-62 252.0
51 TraesCS7D01G207300 chr5B 92.466 146 10 1 4811 4955 313138544 313138689 2.430000e-49 207.0
52 TraesCS7D01G207300 chr5D 82.579 442 65 9 31 462 362009178 362009617 4.860000e-101 379.0
53 TraesCS7D01G207300 chr5D 78.070 456 80 7 25 462 452363122 452362669 3.050000e-68 270.0
54 TraesCS7D01G207300 chr5D 77.582 397 71 9 73 454 528662810 528663203 2.410000e-54 224.0
55 TraesCS7D01G207300 chr5D 94.697 132 7 0 4815 4946 472125789 472125658 8.730000e-49 206.0
56 TraesCS7D01G207300 chr5D 100.000 36 0 0 2493 2528 124414790 124414755 4.300000e-07 67.6
57 TraesCS7D01G207300 chr5D 100.000 36 0 0 2493 2528 124425395 124425360 4.300000e-07 67.6
58 TraesCS7D01G207300 chr5A 82.276 457 56 15 26 462 269281662 269282113 8.140000e-99 372.0
59 TraesCS7D01G207300 chr5A 86.667 225 30 0 37 261 458282256 458282480 3.980000e-62 250.0
60 TraesCS7D01G207300 chr6D 82.552 384 52 5 37 406 389918751 389918369 2.310000e-84 324.0
61 TraesCS7D01G207300 chr6D 93.720 207 10 3 3369 3572 366394977 366395183 2.330000e-79 307.0
62 TraesCS7D01G207300 chr6D 80.729 384 56 10 25 406 356803157 356802790 3.920000e-72 283.0
63 TraesCS7D01G207300 chr6D 80.980 347 53 6 118 452 301710871 301711216 5.110000e-66 263.0
64 TraesCS7D01G207300 chr6D 93.000 100 7 0 2481 2580 108235864 108235963 5.370000e-31 147.0
65 TraesCS7D01G207300 chr6D 87.143 70 9 0 350 419 68071341 68071272 5.520000e-11 80.5
66 TraesCS7D01G207300 chr2D 96.392 194 7 0 3368 3561 462181938 462182131 2.990000e-83 320.0
67 TraesCS7D01G207300 chr2A 96.373 193 7 0 3369 3561 414360530 414360338 1.080000e-82 318.0
68 TraesCS7D01G207300 chr2A 95.812 191 8 0 3371 3561 44469985 44470175 6.470000e-80 309.0
69 TraesCS7D01G207300 chr2A 96.970 33 1 0 1 33 384966007 384965975 1.000000e-03 56.5
70 TraesCS7D01G207300 chr4A 94.608 204 9 2 3369 3572 166198672 166198471 1.390000e-81 315.0
71 TraesCS7D01G207300 chr4A 100.000 30 0 0 1 30 320195123 320195094 1.000000e-03 56.5
72 TraesCS7D01G207300 chr4A 96.875 32 1 0 1 32 272244971 272244940 3.000000e-03 54.7
73 TraesCS7D01G207300 chr4A 96.875 32 1 0 1 32 371754906 371754875 3.000000e-03 54.7
74 TraesCS7D01G207300 chr4B 94.898 196 10 0 3369 3564 539205959 539205764 2.330000e-79 307.0
75 TraesCS7D01G207300 chr4B 95.683 139 6 0 4813 4951 464158427 464158289 2.410000e-54 224.0
76 TraesCS7D01G207300 chr4B 80.172 232 44 1 27 258 557557614 557557843 8.860000e-39 172.0
77 TraesCS7D01G207300 chr3A 94.898 196 10 0 3369 3564 167143404 167143599 2.330000e-79 307.0
78 TraesCS7D01G207300 chr3A 92.000 100 6 2 2481 2579 726082015 726082113 8.980000e-29 139.0
79 TraesCS7D01G207300 chr3A 100.000 30 0 0 1 30 315570969 315570940 1.000000e-03 56.5
80 TraesCS7D01G207300 chr3A 100.000 30 0 0 1 30 315991691 315991662 1.000000e-03 56.5
81 TraesCS7D01G207300 chr3A 96.970 33 0 1 1 33 293921986 293921955 3.000000e-03 54.7
82 TraesCS7D01G207300 chr3D 85.473 296 37 4 63 356 404005931 404005640 3.010000e-78 303.0
83 TraesCS7D01G207300 chr3D 79.688 448 68 14 25 459 5672242 5672679 1.080000e-77 302.0
84 TraesCS7D01G207300 chr3D 95.522 134 6 0 4811 4944 210622416 210622549 1.450000e-51 215.0
85 TraesCS7D01G207300 chr3D 76.096 456 84 10 31 462 589423467 589423013 1.450000e-51 215.0
86 TraesCS7D01G207300 chr3D 94.326 141 5 2 4814 4953 496172751 496172889 5.220000e-51 213.0
87 TraesCS7D01G207300 chr3D 95.918 98 2 2 2484 2580 88359629 88359533 2.480000e-34 158.0
88 TraesCS7D01G207300 chr3D 86.667 75 8 2 338 410 340437507 340437433 1.540000e-11 82.4
89 TraesCS7D01G207300 chr1A 92.381 210 14 2 3371 3578 82343535 82343744 1.400000e-76 298.0
90 TraesCS7D01G207300 chr1A 91.892 148 11 1 4807 4954 287275148 287275002 8.730000e-49 206.0
91 TraesCS7D01G207300 chr1A 97.059 34 0 1 1 33 188944623 188944590 1.000000e-03 56.5
92 TraesCS7D01G207300 chr1A 92.500 40 2 1 1 39 213355611 213355572 1.000000e-03 56.5
93 TraesCS7D01G207300 chr6A 79.616 417 75 7 25 433 499349098 499348684 2.340000e-74 291.0
94 TraesCS7D01G207300 chr6A 91.000 100 9 0 2481 2580 133368755 133368854 1.160000e-27 135.0
95 TraesCS7D01G207300 chr6A 90.099 101 9 1 2481 2581 449400025 449400124 5.410000e-26 130.0
96 TraesCS7D01G207300 chr6A 84.615 78 9 3 334 409 493161330 493161254 2.570000e-09 75.0
97 TraesCS7D01G207300 chr6A 86.885 61 8 0 350 410 59071054 59071114 1.200000e-07 69.4
98 TraesCS7D01G207300 chr1D 78.251 423 55 22 62 472 433507243 433507640 3.100000e-58 237.0
99 TraesCS7D01G207300 chr1D 79.936 314 40 11 164 462 397637963 397637658 6.750000e-50 209.0
100 TraesCS7D01G207300 chr1D 82.927 205 35 0 62 266 350900025 350899821 1.140000e-42 185.0
101 TraesCS7D01G207300 chr1D 84.000 100 16 0 350 449 458283569 458283470 5.480000e-16 97.1
102 TraesCS7D01G207300 chr1D 86.842 76 9 1 336 410 375240753 375240828 4.270000e-12 84.2
103 TraesCS7D01G207300 chr1D 88.710 62 5 2 350 410 114066501 114066561 2.570000e-09 75.0
104 TraesCS7D01G207300 chr3B 81.915 282 30 10 6233 6498 576142817 576142541 1.120000e-52 219.0
105 TraesCS7D01G207300 chr3B 88.636 88 6 2 2496 2580 112285293 112285207 3.280000e-18 104.0
106 TraesCS7D01G207300 chr6B 93.706 143 6 3 4806 4945 550687566 550687708 1.880000e-50 211.0
107 TraesCS7D01G207300 chr4D 79.752 242 28 11 25 266 55283106 55282886 8.920000e-34 156.0
108 TraesCS7D01G207300 chr4D 78.947 133 17 11 292 418 370304680 370304553 5.520000e-11 80.5
109 TraesCS7D01G207300 chr1B 91.000 100 9 0 2481 2580 254450647 254450746 1.160000e-27 135.0
110 TraesCS7D01G207300 chr1B 83.333 78 12 1 334 410 670277678 670277601 3.320000e-08 71.3
111 TraesCS7D01G207300 chr2B 96.875 32 0 1 2 33 310006579 310006609 1.200000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G207300 chr7D 164744533 164751176 6643 False 12270.000000 12270 100.000000 1 6644 1 chr7D.!!$F1 6643
1 TraesCS7D01G207300 chr7D 638500654 638501194 540 True 220.500000 311 89.901000 4209 4576 2 chr7D.!!$R4 367
2 TraesCS7D01G207300 chr7A 166481307 166489312 8005 False 1314.333333 4253 90.872167 60 6460 6 chr7A.!!$F7 6400
3 TraesCS7D01G207300 chr7A 166870909 166872730 1821 True 329.400000 569 89.169000 6136 6633 2 chr7A.!!$R2 497
4 TraesCS7D01G207300 chr7B 127644770 127651709 6939 False 1214.471429 4104 93.464000 60 6633 7 chr7B.!!$F3 6573

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
447 461 0.034896 GAGAGCTTCGGTTGGGTCAA 59.965 55.000 0.00 0.00 33.07 3.18 F
484 498 0.250338 GTCTGCCGGTTTGAGAGGTT 60.250 55.000 1.90 0.00 0.00 3.50 F
603 2008 0.955919 GGTGAGCCAGAAGTTTCGGG 60.956 60.000 6.67 6.67 44.11 5.14 F
1391 2865 1.153249 TTCGCATCCCCGATTCCAC 60.153 57.895 0.00 0.00 37.06 4.02 F
1431 2913 1.439679 GACTGGAATGTGAACCCGTC 58.560 55.000 0.00 0.00 34.46 4.79 F
3376 4893 0.034380 TACTCCCTCCGTCAGAGTGG 60.034 60.000 2.26 0.00 40.93 4.00 F
3410 4927 0.388134 TGTCGAACGCTAAGAGTGGC 60.388 55.000 0.00 0.00 0.00 5.01 F
3411 4928 0.388134 GTCGAACGCTAAGAGTGGCA 60.388 55.000 0.00 0.00 0.00 4.92 F
3543 5060 1.247567 TTGGCAAAAGCTAGAGTGGC 58.752 50.000 0.00 0.00 37.09 5.01 F
5620 7798 1.135960 TGTGAACAGGGACATGGTGA 58.864 50.000 0.00 0.00 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1404 2886 0.107508 CACATTCCAGTCCTGCGGAT 60.108 55.000 0.00 0.0 32.73 4.18 R
2008 3490 0.821301 TTCACAGCACAATTCCCGCA 60.821 50.000 0.00 0.0 0.00 5.69 R
2066 3548 3.262915 AGCAGCAGGAAAGAATACTCTGT 59.737 43.478 0.00 0.0 30.03 3.41 R
3366 4883 0.249447 TCACAACTGCCACTCTGACG 60.249 55.000 0.00 0.0 0.00 4.35 R
3393 4910 0.315886 TTGCCACTCTTAGCGTTCGA 59.684 50.000 0.00 0.0 0.00 3.71 R
5227 7405 0.320421 ATGCGCCAACTAACGACTGT 60.320 50.000 4.18 0.0 0.00 3.55 R
5230 7408 0.793861 TCAATGCGCCAACTAACGAC 59.206 50.000 4.18 0.0 0.00 4.34 R
5328 7506 1.578206 GCGGAGTTGTTGCCTTCTCC 61.578 60.000 0.00 0.0 41.91 3.71 R
5634 7812 0.103208 GGACCAGCCACTACTCGATG 59.897 60.000 0.00 0.0 36.34 3.84 R
6502 10031 2.515926 TAGGCTCAGATAAGCAAGCG 57.484 50.000 0.00 0.0 44.35 4.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 1.531578 GAAAGACGAGACACCTTTGCC 59.468 52.381 0.00 0.00 31.06 4.52
21 22 0.759346 AAGACGAGACACCTTTGCCT 59.241 50.000 0.00 0.00 0.00 4.75
22 23 0.318762 AGACGAGACACCTTTGCCTC 59.681 55.000 0.00 0.00 0.00 4.70
23 24 0.318762 GACGAGACACCTTTGCCTCT 59.681 55.000 0.00 0.00 0.00 3.69
24 25 1.544691 GACGAGACACCTTTGCCTCTA 59.455 52.381 0.00 0.00 0.00 2.43
25 26 2.166664 GACGAGACACCTTTGCCTCTAT 59.833 50.000 0.00 0.00 0.00 1.98
26 27 2.166664 ACGAGACACCTTTGCCTCTATC 59.833 50.000 0.00 0.00 0.00 2.08
27 28 2.166459 CGAGACACCTTTGCCTCTATCA 59.834 50.000 0.00 0.00 0.00 2.15
28 29 3.526534 GAGACACCTTTGCCTCTATCAC 58.473 50.000 0.00 0.00 0.00 3.06
29 30 2.093973 AGACACCTTTGCCTCTATCACG 60.094 50.000 0.00 0.00 0.00 4.35
30 31 1.009829 CACCTTTGCCTCTATCACGC 58.990 55.000 0.00 0.00 0.00 5.34
31 32 0.460284 ACCTTTGCCTCTATCACGCG 60.460 55.000 3.53 3.53 0.00 6.01
32 33 1.638467 CTTTGCCTCTATCACGCGC 59.362 57.895 5.73 0.00 0.00 6.86
33 34 2.082437 CTTTGCCTCTATCACGCGCG 62.082 60.000 30.96 30.96 0.00 6.86
38 39 4.569023 TCTATCACGCGCGCAGGG 62.569 66.667 32.58 24.14 46.11 4.45
180 182 1.805345 CGTACTCGTCTCTGGAGTTGT 59.195 52.381 0.00 0.00 41.83 3.32
238 240 1.398692 GCAAAGGATTGGGCGGATTA 58.601 50.000 0.00 0.00 37.02 1.75
257 259 4.468689 GGAAAGGGGAGCGTCGGG 62.469 72.222 0.00 0.00 0.00 5.14
276 288 1.446966 GAGCGGAGTGAAGTGAGCC 60.447 63.158 0.00 0.00 0.00 4.70
293 306 1.374947 CCAGGTTTGCTTCGGAGGA 59.625 57.895 0.00 0.00 0.00 3.71
303 316 2.569853 TGCTTCGGAGGAGGATTTTGTA 59.430 45.455 0.00 0.00 0.00 2.41
305 318 3.118738 GCTTCGGAGGAGGATTTTGTAGA 60.119 47.826 0.00 0.00 0.00 2.59
310 323 3.700038 GGAGGAGGATTTTGTAGAGTCGA 59.300 47.826 0.00 0.00 0.00 4.20
312 325 4.601084 AGGAGGATTTTGTAGAGTCGAGA 58.399 43.478 0.00 0.00 0.00 4.04
366 380 3.953775 CCCGGGCCGCCTCATATT 61.954 66.667 23.20 0.00 0.00 1.28
379 393 5.452776 CCGCCTCATATTCGCCCTATATTTA 60.453 44.000 0.00 0.00 0.00 1.40
395 409 5.983333 ATATTTAGGCTGGATATGAGGGG 57.017 43.478 0.00 0.00 0.00 4.79
397 411 2.030027 TAGGCTGGATATGAGGGGTG 57.970 55.000 0.00 0.00 0.00 4.61
399 413 1.422161 GGCTGGATATGAGGGGTGCT 61.422 60.000 0.00 0.00 0.00 4.40
424 438 0.661020 GCCCGAATATTTGTCCGTGG 59.339 55.000 1.99 0.00 0.00 4.94
438 452 1.291877 CCGTGGTTTGAGAGCTTCGG 61.292 60.000 0.00 0.00 37.50 4.30
447 461 0.034896 GAGAGCTTCGGTTGGGTCAA 59.965 55.000 0.00 0.00 33.07 3.18
448 462 0.693049 AGAGCTTCGGTTGGGTCAAT 59.307 50.000 0.00 0.00 33.07 2.57
481 495 4.285851 GGTCTGCCGGTTTGAGAG 57.714 61.111 1.90 0.00 0.00 3.20
484 498 0.250338 GTCTGCCGGTTTGAGAGGTT 60.250 55.000 1.90 0.00 0.00 3.50
486 500 1.291877 CTGCCGGTTTGAGAGGTTCG 61.292 60.000 1.90 0.00 0.00 3.95
498 550 3.827302 TGAGAGGTTCGGCTCTTATATCC 59.173 47.826 0.00 0.00 32.44 2.59
499 551 3.166679 AGAGGTTCGGCTCTTATATCCC 58.833 50.000 0.00 0.00 0.00 3.85
500 552 1.893801 AGGTTCGGCTCTTATATCCCG 59.106 52.381 0.00 0.00 41.97 5.14
501 553 1.617357 GGTTCGGCTCTTATATCCCGT 59.383 52.381 0.00 0.00 41.38 5.28
502 554 2.609737 GGTTCGGCTCTTATATCCCGTG 60.610 54.545 0.00 0.00 41.38 4.94
568 1973 2.228822 CAGCCCCTGTGTAAATGTGAAC 59.771 50.000 0.00 0.00 0.00 3.18
603 2008 0.955919 GGTGAGCCAGAAGTTTCGGG 60.956 60.000 6.67 6.67 44.11 5.14
860 2314 5.876460 GGCAAGCAATCCAATAGAAAAACAT 59.124 36.000 0.00 0.00 0.00 2.71
942 2403 2.750637 CCAAGCAGAGCCAGCAGG 60.751 66.667 0.00 0.00 38.23 4.85
1391 2865 1.153249 TTCGCATCCCCGATTCCAC 60.153 57.895 0.00 0.00 37.06 4.02
1397 2871 3.411517 CCCCGATTCCACCAGCCT 61.412 66.667 0.00 0.00 0.00 4.58
1398 2872 2.190578 CCCGATTCCACCAGCCTC 59.809 66.667 0.00 0.00 0.00 4.70
1399 2873 2.669133 CCCGATTCCACCAGCCTCA 61.669 63.158 0.00 0.00 0.00 3.86
1404 2886 2.037641 CGATTCCACCAGCCTCATCATA 59.962 50.000 0.00 0.00 0.00 2.15
1431 2913 1.439679 GACTGGAATGTGAACCCGTC 58.560 55.000 0.00 0.00 34.46 4.79
1445 2927 1.518572 CCGTCCGATTCCTCCGTTG 60.519 63.158 0.00 0.00 0.00 4.10
1743 3225 2.108514 CCGGTGCATGTCGCTCAAT 61.109 57.895 0.00 0.00 43.06 2.57
1946 3428 2.429971 TCAAATGTGCTTTGCTTGTGGA 59.570 40.909 0.00 0.00 43.32 4.02
2008 3490 2.740904 GCCGAACGTTAGGAATTAGGCT 60.741 50.000 28.90 0.00 40.00 4.58
2062 3544 7.355101 TCCCGCTGATAGGATAAGATTATACT 58.645 38.462 2.94 2.94 37.97 2.12
2063 3545 7.502895 TCCCGCTGATAGGATAAGATTATACTC 59.497 40.741 0.46 0.00 35.88 2.59
2064 3546 7.255660 CCCGCTGATAGGATAAGATTATACTCC 60.256 44.444 0.46 0.00 35.88 3.85
2065 3547 7.285629 CCGCTGATAGGATAAGATTATACTCCA 59.714 40.741 0.46 1.41 35.88 3.86
2066 3548 8.687242 CGCTGATAGGATAAGATTATACTCCAA 58.313 37.037 0.46 0.00 35.88 3.53
2116 3598 5.835113 TCAAAAAGCTAGCTGACAGTTTT 57.165 34.783 20.16 17.12 0.00 2.43
2142 3624 6.396829 GCAGAATATCCTTTAACTGCCATT 57.603 37.500 0.00 0.00 42.91 3.16
2180 3662 9.987272 CAACTCATATGAGGTTAACTGATATCA 57.013 33.333 31.19 5.07 39.48 2.15
2357 3845 4.342665 TCGTATGCCTGACCACATAATGTA 59.657 41.667 0.00 0.00 30.89 2.29
2442 3930 6.745907 GGTACTATTTCCTTTGTGAAATTCGC 59.254 38.462 0.00 0.00 41.05 4.70
2478 3966 4.329256 GGTGAATAGCTCGTGAACTTAACC 59.671 45.833 0.00 0.00 0.00 2.85
2588 4077 4.261614 GCTGACTTTCAAAAACCGATCCTT 60.262 41.667 0.00 0.00 0.00 3.36
2642 4131 9.325198 CATCTGTGGCACTAATTACATAGTAAA 57.675 33.333 19.83 0.00 34.40 2.01
2673 4162 6.035005 CGGATGCTCATTTTATCACTATACGG 59.965 42.308 0.00 0.00 0.00 4.02
3046 4538 6.021596 GCTGTAAACGATGAACCTGTTATTG 58.978 40.000 0.00 0.00 0.00 1.90
3367 4884 8.904099 ATGAATTTAATAAACTACTCCCTCCG 57.096 34.615 0.00 0.00 0.00 4.63
3369 4886 7.983484 TGAATTTAATAAACTACTCCCTCCGTC 59.017 37.037 0.00 0.00 0.00 4.79
3371 4888 6.461110 TTAATAAACTACTCCCTCCGTCAG 57.539 41.667 0.00 0.00 0.00 3.51
3373 4890 2.131776 AACTACTCCCTCCGTCAGAG 57.868 55.000 0.00 0.00 42.83 3.35
3374 4891 0.993470 ACTACTCCCTCCGTCAGAGT 59.007 55.000 0.00 0.00 41.47 3.24
3375 4892 1.340211 ACTACTCCCTCCGTCAGAGTG 60.340 57.143 2.26 0.00 40.93 3.51
3376 4893 0.034380 TACTCCCTCCGTCAGAGTGG 60.034 60.000 2.26 0.00 40.93 4.00
3377 4894 2.680352 TCCCTCCGTCAGAGTGGC 60.680 66.667 0.00 0.00 41.47 5.01
3378 4895 2.997315 CCCTCCGTCAGAGTGGCA 60.997 66.667 0.00 0.00 41.47 4.92
3379 4896 2.575993 CCTCCGTCAGAGTGGCAG 59.424 66.667 0.00 0.00 41.47 4.85
3380 4897 2.279069 CCTCCGTCAGAGTGGCAGT 61.279 63.158 0.00 0.00 41.47 4.40
3382 4899 0.668706 CTCCGTCAGAGTGGCAGTTG 60.669 60.000 0.00 0.00 37.87 3.16
3383 4900 1.069765 CCGTCAGAGTGGCAGTTGT 59.930 57.895 0.00 0.00 0.00 3.32
3384 4901 1.224069 CCGTCAGAGTGGCAGTTGTG 61.224 60.000 0.00 0.00 0.00 3.33
3386 4903 1.606480 CGTCAGAGTGGCAGTTGTGAT 60.606 52.381 10.47 0.00 0.00 3.06
3387 4904 2.352715 CGTCAGAGTGGCAGTTGTGATA 60.353 50.000 10.47 0.00 0.00 2.15
3388 4905 2.996621 GTCAGAGTGGCAGTTGTGATAC 59.003 50.000 10.47 0.00 0.00 2.24
3389 4906 2.632512 TCAGAGTGGCAGTTGTGATACA 59.367 45.455 0.00 0.00 0.00 2.29
3390 4907 3.261643 TCAGAGTGGCAGTTGTGATACAT 59.738 43.478 0.00 0.00 0.00 2.29
3391 4908 4.005650 CAGAGTGGCAGTTGTGATACATT 58.994 43.478 0.00 0.00 0.00 2.71
3392 4909 4.005650 AGAGTGGCAGTTGTGATACATTG 58.994 43.478 0.00 0.00 0.00 2.82
3393 4910 3.753272 GAGTGGCAGTTGTGATACATTGT 59.247 43.478 0.00 0.00 0.00 2.71
3394 4911 3.753272 AGTGGCAGTTGTGATACATTGTC 59.247 43.478 0.00 0.00 0.00 3.18
3395 4912 2.741517 TGGCAGTTGTGATACATTGTCG 59.258 45.455 0.00 0.00 0.00 4.35
3396 4913 3.000041 GGCAGTTGTGATACATTGTCGA 59.000 45.455 0.00 0.00 0.00 4.20
3398 4915 4.394795 GCAGTTGTGATACATTGTCGAAC 58.605 43.478 0.00 0.00 0.00 3.95
3400 4917 3.122948 AGTTGTGATACATTGTCGAACGC 59.877 43.478 0.00 0.00 0.00 4.84
3401 4918 2.954316 TGTGATACATTGTCGAACGCT 58.046 42.857 0.00 0.00 0.00 5.07
3402 4919 4.099380 TGTGATACATTGTCGAACGCTA 57.901 40.909 0.00 0.00 0.00 4.26
3406 4923 5.034797 TGATACATTGTCGAACGCTAAGAG 58.965 41.667 0.00 0.00 0.00 2.85
3409 4926 2.060326 TTGTCGAACGCTAAGAGTGG 57.940 50.000 0.00 0.00 0.00 4.00
3410 4927 0.388134 TGTCGAACGCTAAGAGTGGC 60.388 55.000 0.00 0.00 0.00 5.01
3411 4928 0.388134 GTCGAACGCTAAGAGTGGCA 60.388 55.000 0.00 0.00 0.00 4.92
3414 4931 1.529438 CGAACGCTAAGAGTGGCAAAA 59.471 47.619 0.00 0.00 0.00 2.44
3415 4932 2.411547 CGAACGCTAAGAGTGGCAAAAG 60.412 50.000 0.00 0.00 0.00 2.27
3416 4933 2.256117 ACGCTAAGAGTGGCAAAAGT 57.744 45.000 0.00 0.00 0.00 2.66
3417 4934 1.873591 ACGCTAAGAGTGGCAAAAGTG 59.126 47.619 0.00 0.00 0.00 3.16
3418 4935 2.143122 CGCTAAGAGTGGCAAAAGTGA 58.857 47.619 0.00 0.00 0.00 3.41
3419 4936 2.548057 CGCTAAGAGTGGCAAAAGTGAA 59.452 45.455 0.00 0.00 0.00 3.18
3420 4937 3.003275 CGCTAAGAGTGGCAAAAGTGAAA 59.997 43.478 0.00 0.00 0.00 2.69
3421 4938 4.320494 CGCTAAGAGTGGCAAAAGTGAAAT 60.320 41.667 0.00 0.00 0.00 2.17
3422 4939 4.919754 GCTAAGAGTGGCAAAAGTGAAATG 59.080 41.667 0.00 0.00 0.00 2.32
3424 4941 5.596836 AAGAGTGGCAAAAGTGAAATGAA 57.403 34.783 0.00 0.00 0.00 2.57
3425 4942 5.596836 AGAGTGGCAAAAGTGAAATGAAA 57.403 34.783 0.00 0.00 0.00 2.69
3426 4943 5.976458 AGAGTGGCAAAAGTGAAATGAAAA 58.024 33.333 0.00 0.00 0.00 2.29
3427 4944 6.585416 AGAGTGGCAAAAGTGAAATGAAAAT 58.415 32.000 0.00 0.00 0.00 1.82
3428 4945 7.049754 AGAGTGGCAAAAGTGAAATGAAAATT 58.950 30.769 0.00 0.00 0.00 1.82
3429 4946 7.553760 AGAGTGGCAAAAGTGAAATGAAAATTT 59.446 29.630 0.00 0.00 0.00 1.82
3430 4947 8.729805 AGTGGCAAAAGTGAAATGAAAATTTA 57.270 26.923 0.00 0.00 0.00 1.40
3431 4948 9.341078 AGTGGCAAAAGTGAAATGAAAATTTAT 57.659 25.926 0.00 0.00 0.00 1.40
3432 4949 9.597999 GTGGCAAAAGTGAAATGAAAATTTATC 57.402 29.630 0.00 0.00 0.00 1.75
3433 4950 8.494347 TGGCAAAAGTGAAATGAAAATTTATCG 58.506 29.630 0.00 0.00 0.00 2.92
3434 4951 8.495148 GGCAAAAGTGAAATGAAAATTTATCGT 58.505 29.630 0.00 0.00 0.00 3.73
3435 4952 9.862585 GCAAAAGTGAAATGAAAATTTATCGTT 57.137 25.926 0.00 0.00 0.00 3.85
3440 4957 9.862585 AGTGAAATGAAAATTTATCGTTTTTGC 57.137 25.926 15.47 11.28 36.43 3.68
3441 4958 9.101971 GTGAAATGAAAATTTATCGTTTTTGCC 57.898 29.630 15.47 8.36 36.43 4.52
3442 4959 8.830580 TGAAATGAAAATTTATCGTTTTTGCCA 58.169 25.926 15.47 9.88 36.43 4.92
3443 4960 9.824534 GAAATGAAAATTTATCGTTTTTGCCAT 57.175 25.926 15.47 0.00 36.43 4.40
3444 4961 9.609950 AAATGAAAATTTATCGTTTTTGCCATG 57.390 25.926 11.52 0.00 33.38 3.66
3445 4962 7.126726 TGAAAATTTATCGTTTTTGCCATGG 57.873 32.000 7.63 7.63 0.00 3.66
3446 4963 6.931281 TGAAAATTTATCGTTTTTGCCATGGA 59.069 30.769 18.40 0.00 0.00 3.41
3447 4964 7.442364 TGAAAATTTATCGTTTTTGCCATGGAA 59.558 29.630 18.40 0.00 0.00 3.53
3448 4965 7.920160 AAATTTATCGTTTTTGCCATGGAAT 57.080 28.000 18.40 0.00 0.00 3.01
3449 4966 6.907206 ATTTATCGTTTTTGCCATGGAATG 57.093 33.333 18.40 6.34 46.21 2.67
3462 4979 4.131649 CATGGAATGGCATTTGTGATGT 57.868 40.909 14.93 0.00 41.79 3.06
3463 4980 5.265350 CATGGAATGGCATTTGTGATGTA 57.735 39.130 14.93 0.00 41.79 2.29
3464 4981 5.849510 CATGGAATGGCATTTGTGATGTAT 58.150 37.500 14.93 0.00 41.79 2.29
3465 4982 5.936187 TGGAATGGCATTTGTGATGTATT 57.064 34.783 14.93 0.00 0.00 1.89
3466 4983 5.662456 TGGAATGGCATTTGTGATGTATTG 58.338 37.500 14.93 0.00 0.00 1.90
3467 4984 5.187381 TGGAATGGCATTTGTGATGTATTGT 59.813 36.000 14.93 0.00 0.00 2.71
3468 4985 5.750067 GGAATGGCATTTGTGATGTATTGTC 59.250 40.000 14.93 0.00 0.00 3.18
3469 4986 5.918426 ATGGCATTTGTGATGTATTGTCA 57.082 34.783 0.00 0.00 0.00 3.58
3470 4987 5.718724 TGGCATTTGTGATGTATTGTCAA 57.281 34.783 0.00 0.00 0.00 3.18
3471 4988 6.094193 TGGCATTTGTGATGTATTGTCAAA 57.906 33.333 0.00 0.00 33.61 2.69
3472 4989 6.519382 TGGCATTTGTGATGTATTGTCAAAA 58.481 32.000 0.00 0.00 32.99 2.44
3474 4991 6.401367 GGCATTTGTGATGTATTGTCAAAAGC 60.401 38.462 0.00 0.00 39.93 3.51
3478 4995 5.771469 TGTGATGTATTGTCAAAAGCCAAG 58.229 37.500 0.00 0.00 0.00 3.61
3479 4996 5.534278 TGTGATGTATTGTCAAAAGCCAAGA 59.466 36.000 0.00 0.00 0.00 3.02
3480 4997 6.088824 GTGATGTATTGTCAAAAGCCAAGAG 58.911 40.000 0.00 0.00 0.00 2.85
3482 4999 5.437289 TGTATTGTCAAAAGCCAAGAGTG 57.563 39.130 0.00 0.00 0.00 3.51
3497 5014 4.460382 CCAAGAGTGGCAAAAGTGATATGT 59.540 41.667 0.00 0.00 38.35 2.29
3502 5019 6.435277 AGAGTGGCAAAAGTGATATGTCAAAT 59.565 34.615 0.00 0.00 35.80 2.32
3503 5020 6.996509 AGTGGCAAAAGTGATATGTCAAATT 58.003 32.000 0.00 0.00 35.80 1.82
3507 5024 8.461222 TGGCAAAAGTGATATGTCAAATTCTAG 58.539 33.333 0.00 0.00 35.80 2.43
3508 5025 8.677300 GGCAAAAGTGATATGTCAAATTCTAGA 58.323 33.333 0.00 0.00 35.80 2.43
3509 5026 9.713740 GCAAAAGTGATATGTCAAATTCTAGAG 57.286 33.333 0.00 0.00 35.80 2.43
3512 5029 8.954950 AAGTGATATGTCAAATTCTAGAGTGG 57.045 34.615 0.00 0.00 35.80 4.00
3513 5030 6.989169 AGTGATATGTCAAATTCTAGAGTGGC 59.011 38.462 0.00 0.00 35.80 5.01
3514 5031 6.763135 GTGATATGTCAAATTCTAGAGTGGCA 59.237 38.462 9.14 9.14 35.80 4.92
3516 5033 8.650490 TGATATGTCAAATTCTAGAGTGGCATA 58.350 33.333 20.59 20.59 41.39 3.14
3517 5034 9.494271 GATATGTCAAATTCTAGAGTGGCATAA 57.506 33.333 21.48 11.73 40.74 1.90
3518 5035 7.798596 ATGTCAAATTCTAGAGTGGCATAAG 57.201 36.000 14.93 0.00 34.66 1.73
3519 5036 5.586243 TGTCAAATTCTAGAGTGGCATAAGC 59.414 40.000 3.98 0.00 41.10 3.09
3520 5037 5.586243 GTCAAATTCTAGAGTGGCATAAGCA 59.414 40.000 0.00 0.00 44.61 3.91
3522 5039 6.658816 TCAAATTCTAGAGTGGCATAAGCAAA 59.341 34.615 0.00 0.00 44.61 3.68
3526 5043 6.441093 TCTAGAGTGGCATAAGCAAAATTG 57.559 37.500 0.00 0.00 44.61 2.32
3528 5045 2.931969 GAGTGGCATAAGCAAAATTGGC 59.068 45.455 0.00 0.00 44.61 4.52
3529 5046 2.302445 AGTGGCATAAGCAAAATTGGCA 59.698 40.909 0.00 0.00 44.61 4.92
3531 5048 3.501445 GTGGCATAAGCAAAATTGGCAAA 59.499 39.130 3.01 0.00 44.76 3.68
3533 5050 4.215827 TGGCATAAGCAAAATTGGCAAAAG 59.784 37.500 3.01 0.00 44.61 2.27
3534 5051 4.160594 GCATAAGCAAAATTGGCAAAAGC 58.839 39.130 3.01 6.24 41.58 3.51
3535 5052 4.083164 GCATAAGCAAAATTGGCAAAAGCT 60.083 37.500 3.01 8.57 41.58 3.74
3536 5053 5.122082 GCATAAGCAAAATTGGCAAAAGCTA 59.878 36.000 15.85 8.06 41.58 3.32
3537 5054 6.673796 GCATAAGCAAAATTGGCAAAAGCTAG 60.674 38.462 15.85 11.49 41.58 3.42
3541 5058 4.151157 GCAAAATTGGCAAAAGCTAGAGTG 59.849 41.667 3.01 0.00 0.00 3.51
3542 5059 4.525912 AAATTGGCAAAAGCTAGAGTGG 57.474 40.909 3.01 0.00 0.00 4.00
3543 5060 1.247567 TTGGCAAAAGCTAGAGTGGC 58.752 50.000 0.00 0.00 37.09 5.01
3545 5062 1.247567 GGCAAAAGCTAGAGTGGCAA 58.752 50.000 0.00 0.00 36.61 4.52
3547 5064 2.035832 GGCAAAAGCTAGAGTGGCAAAA 59.964 45.455 0.00 0.00 36.61 2.44
3548 5065 3.492482 GGCAAAAGCTAGAGTGGCAAAAA 60.492 43.478 0.00 0.00 36.61 1.94
3549 5066 3.490896 GCAAAAGCTAGAGTGGCAAAAAC 59.509 43.478 0.00 0.00 0.00 2.43
3553 5070 4.574599 AGCTAGAGTGGCAAAAACAAAG 57.425 40.909 0.00 0.00 0.00 2.77
3554 5071 3.954258 AGCTAGAGTGGCAAAAACAAAGT 59.046 39.130 0.00 0.00 0.00 2.66
3556 5073 5.105351 AGCTAGAGTGGCAAAAACAAAGTTT 60.105 36.000 0.00 0.00 0.00 2.66
3558 5075 6.237835 GCTAGAGTGGCAAAAACAAAGTTTTC 60.238 38.462 8.16 0.00 0.00 2.29
3560 5077 4.006989 AGTGGCAAAAACAAAGTTTTCCC 58.993 39.130 8.16 11.39 0.00 3.97
3602 5277 3.505680 TGTGCAAAGTCATGTGGTATTCC 59.494 43.478 0.00 0.00 0.00 3.01
3896 5586 1.561542 ACTGCTATTCCAGTGGAAGGG 59.438 52.381 27.83 22.09 45.48 3.95
4155 5845 5.529430 CGTGGGTATGCATCCTAAAATGTTA 59.471 40.000 0.19 0.00 0.00 2.41
4199 5889 1.247567 CGTCCTCACATTGGGCTTTT 58.752 50.000 0.00 0.00 0.00 2.27
4227 5917 7.450323 TCTTAGCTTAAGCACAAAAGGGTTAAT 59.550 33.333 28.39 5.82 45.16 1.40
4826 6887 9.562408 CCTTCCTATTTTTCTTATACTTCCTCC 57.438 37.037 0.00 0.00 0.00 4.30
4827 6888 9.262358 CTTCCTATTTTTCTTATACTTCCTCCG 57.738 37.037 0.00 0.00 0.00 4.63
4828 6889 8.315220 TCCTATTTTTCTTATACTTCCTCCGT 57.685 34.615 0.00 0.00 0.00 4.69
4829 6890 8.419442 TCCTATTTTTCTTATACTTCCTCCGTC 58.581 37.037 0.00 0.00 0.00 4.79
4830 6891 7.656542 CCTATTTTTCTTATACTTCCTCCGTCC 59.343 40.741 0.00 0.00 0.00 4.79
4831 6892 5.349061 TTTTCTTATACTTCCTCCGTCCC 57.651 43.478 0.00 0.00 0.00 4.46
4832 6893 3.675348 TCTTATACTTCCTCCGTCCCA 57.325 47.619 0.00 0.00 0.00 4.37
4833 6894 3.985127 TCTTATACTTCCTCCGTCCCAA 58.015 45.455 0.00 0.00 0.00 4.12
4834 6895 4.355549 TCTTATACTTCCTCCGTCCCAAA 58.644 43.478 0.00 0.00 0.00 3.28
4835 6896 4.778958 TCTTATACTTCCTCCGTCCCAAAA 59.221 41.667 0.00 0.00 0.00 2.44
4836 6897 5.427481 TCTTATACTTCCTCCGTCCCAAAAT 59.573 40.000 0.00 0.00 0.00 1.82
4837 6898 2.971901 ACTTCCTCCGTCCCAAAATT 57.028 45.000 0.00 0.00 0.00 1.82
4838 6899 2.791655 ACTTCCTCCGTCCCAAAATTC 58.208 47.619 0.00 0.00 0.00 2.17
4839 6900 2.375509 ACTTCCTCCGTCCCAAAATTCT 59.624 45.455 0.00 0.00 0.00 2.40
4840 6901 3.181433 ACTTCCTCCGTCCCAAAATTCTT 60.181 43.478 0.00 0.00 0.00 2.52
4841 6902 2.790433 TCCTCCGTCCCAAAATTCTTG 58.210 47.619 0.00 0.00 0.00 3.02
4842 6903 2.107552 TCCTCCGTCCCAAAATTCTTGT 59.892 45.455 0.00 0.00 0.00 3.16
4843 6904 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
4844 6905 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
4845 6906 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
4846 6907 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
4847 6908 5.378332 TCCGTCCCAAAATTCTTGTCTTAA 58.622 37.500 0.00 0.00 0.00 1.85
4848 6909 5.828859 TCCGTCCCAAAATTCTTGTCTTAAA 59.171 36.000 0.00 0.00 0.00 1.52
4849 6910 6.492087 TCCGTCCCAAAATTCTTGTCTTAAAT 59.508 34.615 0.00 0.00 0.00 1.40
4850 6911 7.014808 TCCGTCCCAAAATTCTTGTCTTAAATT 59.985 33.333 0.00 0.00 0.00 1.82
4851 6912 7.655732 CCGTCCCAAAATTCTTGTCTTAAATTT 59.344 33.333 0.00 0.00 34.86 1.82
4852 6913 8.487176 CGTCCCAAAATTCTTGTCTTAAATTTG 58.513 33.333 0.00 0.00 33.95 2.32
4853 6914 9.325198 GTCCCAAAATTCTTGTCTTAAATTTGT 57.675 29.630 0.00 0.00 33.95 2.83
4854 6915 9.541143 TCCCAAAATTCTTGTCTTAAATTTGTC 57.459 29.630 0.00 0.00 33.95 3.18
4855 6916 9.546428 CCCAAAATTCTTGTCTTAAATTTGTCT 57.454 29.630 0.00 0.00 33.95 3.41
4885 6946 8.922058 ACAGATGTACCTAATACTAAAACGTG 57.078 34.615 0.00 0.00 34.56 4.49
4886 6947 8.742777 ACAGATGTACCTAATACTAAAACGTGA 58.257 33.333 0.00 0.00 34.56 4.35
4887 6948 9.017669 CAGATGTACCTAATACTAAAACGTGAC 57.982 37.037 0.00 0.00 34.56 3.67
4888 6949 8.964772 AGATGTACCTAATACTAAAACGTGACT 58.035 33.333 0.00 0.00 34.56 3.41
4889 6950 9.578439 GATGTACCTAATACTAAAACGTGACTT 57.422 33.333 0.00 0.00 34.56 3.01
4890 6951 8.746922 TGTACCTAATACTAAAACGTGACTTG 57.253 34.615 0.00 0.00 34.56 3.16
4891 6952 8.575589 TGTACCTAATACTAAAACGTGACTTGA 58.424 33.333 0.00 0.00 34.56 3.02
4892 6953 9.578439 GTACCTAATACTAAAACGTGACTTGAT 57.422 33.333 0.00 0.00 0.00 2.57
4894 6955 9.578439 ACCTAATACTAAAACGTGACTTGATAC 57.422 33.333 0.00 0.00 0.00 2.24
4895 6956 9.577110 CCTAATACTAAAACGTGACTTGATACA 57.423 33.333 0.00 0.00 0.00 2.29
4898 6959 6.963049 ACTAAAACGTGACTTGATACATCC 57.037 37.500 0.00 0.00 0.00 3.51
4899 6960 4.921470 AAAACGTGACTTGATACATCCG 57.079 40.909 0.00 0.00 0.00 4.18
4900 6961 3.587797 AACGTGACTTGATACATCCGT 57.412 42.857 0.00 0.00 0.00 4.69
4901 6962 4.707030 AACGTGACTTGATACATCCGTA 57.293 40.909 0.00 0.00 0.00 4.02
4902 6963 4.913335 ACGTGACTTGATACATCCGTAT 57.087 40.909 0.00 0.00 41.16 3.06
4903 6964 5.258456 ACGTGACTTGATACATCCGTATT 57.742 39.130 0.00 0.00 38.48 1.89
4904 6965 5.657474 ACGTGACTTGATACATCCGTATTT 58.343 37.500 0.00 0.00 38.48 1.40
4905 6966 6.798482 ACGTGACTTGATACATCCGTATTTA 58.202 36.000 0.00 0.00 38.48 1.40
4906 6967 6.916387 ACGTGACTTGATACATCCGTATTTAG 59.084 38.462 0.00 0.00 38.48 1.85
4907 6968 7.136772 CGTGACTTGATACATCCGTATTTAGA 58.863 38.462 0.00 0.00 38.48 2.10
4908 6969 7.113124 CGTGACTTGATACATCCGTATTTAGAC 59.887 40.741 0.00 0.00 38.48 2.59
4909 6970 7.919091 GTGACTTGATACATCCGTATTTAGACA 59.081 37.037 0.00 0.00 38.48 3.41
4910 6971 8.471609 TGACTTGATACATCCGTATTTAGACAA 58.528 33.333 0.00 0.00 38.48 3.18
4911 6972 9.309516 GACTTGATACATCCGTATTTAGACAAA 57.690 33.333 0.00 0.00 38.48 2.83
4912 6973 9.832445 ACTTGATACATCCGTATTTAGACAAAT 57.168 29.630 0.00 0.00 38.48 2.32
4919 6980 9.530633 ACATCCGTATTTAGACAAATCTAAGAC 57.469 33.333 0.00 0.83 45.93 3.01
4920 6981 9.529325 CATCCGTATTTAGACAAATCTAAGACA 57.471 33.333 9.81 0.00 45.93 3.41
4922 6983 9.582431 TCCGTATTTAGACAAATCTAAGACAAG 57.418 33.333 9.81 3.88 45.93 3.16
4923 6984 9.582431 CCGTATTTAGACAAATCTAAGACAAGA 57.418 33.333 9.81 0.00 45.93 3.02
4931 6992 9.354673 AGACAAATCTAAGACAAGAATTTTGGA 57.645 29.630 0.00 0.00 33.04 3.53
4932 6993 9.965824 GACAAATCTAAGACAAGAATTTTGGAA 57.034 29.630 0.00 0.00 33.04 3.53
4933 6994 9.750125 ACAAATCTAAGACAAGAATTTTGGAAC 57.250 29.630 0.00 0.00 33.04 3.62
4934 6995 8.905702 CAAATCTAAGACAAGAATTTTGGAACG 58.094 33.333 5.68 0.00 28.49 3.95
4935 6996 6.554334 TCTAAGACAAGAATTTTGGAACGG 57.446 37.500 0.00 0.00 0.00 4.44
4936 6997 6.292923 TCTAAGACAAGAATTTTGGAACGGA 58.707 36.000 0.00 0.00 0.00 4.69
4937 6998 5.438761 AAGACAAGAATTTTGGAACGGAG 57.561 39.130 0.00 0.00 0.00 4.63
4938 6999 3.821033 AGACAAGAATTTTGGAACGGAGG 59.179 43.478 0.00 0.00 0.00 4.30
4939 7000 2.890945 ACAAGAATTTTGGAACGGAGGG 59.109 45.455 0.00 0.00 0.00 4.30
4940 7001 3.153919 CAAGAATTTTGGAACGGAGGGA 58.846 45.455 0.00 0.00 0.00 4.20
4941 7002 3.073274 AGAATTTTGGAACGGAGGGAG 57.927 47.619 0.00 0.00 0.00 4.30
4942 7003 2.375509 AGAATTTTGGAACGGAGGGAGT 59.624 45.455 0.00 0.00 0.00 3.85
4943 7004 3.585732 AGAATTTTGGAACGGAGGGAGTA 59.414 43.478 0.00 0.00 0.00 2.59
4971 7032 3.781079 TTCTTCTGCACACTTGGTTTG 57.219 42.857 0.00 0.00 0.00 2.93
5023 7085 5.037385 CGTCATGTGTTCTGTAGGACATAG 58.963 45.833 0.00 0.00 0.00 2.23
5029 7091 6.008331 TGTGTTCTGTAGGACATAGTGTACT 58.992 40.000 0.00 0.00 45.18 2.73
5035 7097 7.403671 TCTGTAGGACATAGTGTACTTCTTCT 58.596 38.462 0.00 0.00 38.73 2.85
5159 7337 6.427853 ACTTAACCGTTATTCCTTGTTGGTAC 59.572 38.462 0.00 0.00 37.07 3.34
5162 7340 6.112927 ACCGTTATTCCTTGTTGGTACTTA 57.887 37.500 0.00 0.00 37.07 2.24
5189 7367 5.567423 GCTTGTTTCCATTGGCTGAAACTAT 60.567 40.000 15.55 0.00 46.58 2.12
5191 7369 7.531857 TTGTTTCCATTGGCTGAAACTATAA 57.468 32.000 15.55 4.04 46.58 0.98
5194 7372 6.773976 TTCCATTGGCTGAAACTATAAAGG 57.226 37.500 0.00 0.00 0.00 3.11
5195 7373 5.200483 TCCATTGGCTGAAACTATAAAGGG 58.800 41.667 0.00 0.00 0.00 3.95
5196 7374 5.044476 TCCATTGGCTGAAACTATAAAGGGA 60.044 40.000 0.00 0.00 0.00 4.20
5197 7375 5.067805 CCATTGGCTGAAACTATAAAGGGAC 59.932 44.000 0.00 0.00 0.00 4.46
5230 7408 8.932791 AGTAATACGATTTGTTGGAACTTACAG 58.067 33.333 0.00 0.00 0.00 2.74
5242 7420 3.431233 GGAACTTACAGTCGTTAGTTGGC 59.569 47.826 2.09 0.00 43.21 4.52
5328 7506 4.771590 TGTGCAGCTAATGAAGGAAAAG 57.228 40.909 0.00 0.00 0.00 2.27
5346 7524 2.544726 GGAGAAGGCAACAACTCCG 58.455 57.895 0.00 0.00 45.82 4.63
5452 7630 3.067833 CCTCACGCGATAGACATCTCTA 58.932 50.000 15.93 0.00 39.76 2.43
5586 7764 2.206576 AGCTTTTCACCAGGGATGAC 57.793 50.000 0.00 0.00 0.00 3.06
5620 7798 1.135960 TGTGAACAGGGACATGGTGA 58.864 50.000 0.00 0.00 0.00 4.02
5646 7824 0.108804 ACGTTGCCATCGAGTAGTGG 60.109 55.000 1.59 0.00 38.55 4.00
5685 7863 4.016444 TCATTCTTTTCGCCAGCCTTATT 58.984 39.130 0.00 0.00 0.00 1.40
5686 7864 5.189928 TCATTCTTTTCGCCAGCCTTATTA 58.810 37.500 0.00 0.00 0.00 0.98
5687 7865 5.827797 TCATTCTTTTCGCCAGCCTTATTAT 59.172 36.000 0.00 0.00 0.00 1.28
5688 7866 5.751243 TTCTTTTCGCCAGCCTTATTATC 57.249 39.130 0.00 0.00 0.00 1.75
5762 7944 2.066262 TGGCGACTTAAGAGAAAAGCG 58.934 47.619 10.09 2.56 0.00 4.68
5799 7981 3.496130 AGCGCTTGTGCATATGTAGATTC 59.504 43.478 2.64 0.00 39.64 2.52
5815 7997 6.582636 TGTAGATTCCATCTGCGTATTCTTT 58.417 36.000 0.00 0.00 43.82 2.52
5888 8070 5.644206 GTCTCTGGGTTAAGAGTTGGATTTC 59.356 44.000 1.44 0.00 43.57 2.17
5951 8135 3.804036 TCCGGCTATTCATTTGTCGATT 58.196 40.909 0.00 0.00 0.00 3.34
5966 8150 9.270576 CATTTGTCGATTAAAGATGTTCTCTTG 57.729 33.333 0.00 0.00 43.60 3.02
5999 8183 2.029110 GGATGATGCCTACAGAGAGAGC 60.029 54.545 0.00 0.00 0.00 4.09
6017 8201 6.479884 AGAGAGCATGTTGGACTTTAAGATT 58.520 36.000 0.00 0.00 0.00 2.40
6050 8234 4.879545 TGCTACCGTTAGGATTCAAAATCC 59.120 41.667 10.16 10.16 41.02 3.01
6085 8270 0.610232 GCTTGGCCTCAACCTCATGT 60.610 55.000 3.32 0.00 0.00 3.21
6086 8271 1.457346 CTTGGCCTCAACCTCATGTC 58.543 55.000 3.32 0.00 0.00 3.06
6117 8302 1.905215 CACAGATCTTGTCCTGGGTCT 59.095 52.381 0.00 0.00 38.16 3.85
6118 8303 1.905215 ACAGATCTTGTCCTGGGTCTG 59.095 52.381 0.00 0.00 33.87 3.51
6119 8304 1.905215 CAGATCTTGTCCTGGGTCTGT 59.095 52.381 0.00 0.00 0.00 3.41
6121 8306 3.708631 CAGATCTTGTCCTGGGTCTGTAT 59.291 47.826 0.00 0.00 0.00 2.29
6122 8307 4.895889 CAGATCTTGTCCTGGGTCTGTATA 59.104 45.833 0.00 0.00 0.00 1.47
6123 8308 5.541868 CAGATCTTGTCCTGGGTCTGTATAT 59.458 44.000 0.00 0.00 0.00 0.86
6124 8309 5.541868 AGATCTTGTCCTGGGTCTGTATATG 59.458 44.000 0.00 0.00 0.00 1.78
6128 8313 5.353394 TGTCCTGGGTCTGTATATGTTTC 57.647 43.478 0.00 0.00 0.00 2.78
6129 8314 4.780554 TGTCCTGGGTCTGTATATGTTTCA 59.219 41.667 0.00 0.00 0.00 2.69
6130 8315 5.249622 TGTCCTGGGTCTGTATATGTTTCAA 59.750 40.000 0.00 0.00 0.00 2.69
6131 8316 5.585047 GTCCTGGGTCTGTATATGTTTCAAC 59.415 44.000 0.00 0.00 0.00 3.18
6132 8317 5.487488 TCCTGGGTCTGTATATGTTTCAACT 59.513 40.000 0.00 0.00 0.00 3.16
6133 8318 5.586243 CCTGGGTCTGTATATGTTTCAACTG 59.414 44.000 0.00 0.00 0.00 3.16
6134 8319 5.496556 TGGGTCTGTATATGTTTCAACTGG 58.503 41.667 0.00 0.00 0.00 4.00
6139 8324 6.367969 GTCTGTATATGTTTCAACTGGTTCGT 59.632 38.462 0.00 0.00 0.00 3.85
6177 9596 0.038599 ACTTCAGACATGGGCATGCA 59.961 50.000 21.36 0.00 42.39 3.96
6335 9857 9.624373 AGTTGATAATAGAAGACATTCAGCAAT 57.376 29.630 0.00 0.00 37.94 3.56
6348 9875 7.392673 AGACATTCAGCAATCAAAATAGACAGT 59.607 33.333 0.00 0.00 0.00 3.55
6502 10031 2.551459 GCCCAGATCATAACTGCATCAC 59.449 50.000 0.00 0.00 34.47 3.06
6633 10171 1.882623 GAGGGGCAAGAAGAACAACAG 59.117 52.381 0.00 0.00 0.00 3.16
6634 10172 1.215423 AGGGGCAAGAAGAACAACAGT 59.785 47.619 0.00 0.00 0.00 3.55
6635 10173 2.031870 GGGGCAAGAAGAACAACAGTT 58.968 47.619 0.00 0.00 0.00 3.16
6636 10174 2.430694 GGGGCAAGAAGAACAACAGTTT 59.569 45.455 0.00 0.00 0.00 2.66
6637 10175 3.118775 GGGGCAAGAAGAACAACAGTTTT 60.119 43.478 0.00 0.00 0.00 2.43
6638 10176 4.112634 GGGCAAGAAGAACAACAGTTTTC 58.887 43.478 0.00 0.00 0.00 2.29
6639 10177 3.791353 GGCAAGAAGAACAACAGTTTTCG 59.209 43.478 0.00 0.00 0.00 3.46
6640 10178 3.240631 GCAAGAAGAACAACAGTTTTCGC 59.759 43.478 0.00 0.00 0.00 4.70
6641 10179 4.662145 CAAGAAGAACAACAGTTTTCGCT 58.338 39.130 0.00 0.00 0.00 4.93
6642 10180 5.729454 GCAAGAAGAACAACAGTTTTCGCTA 60.729 40.000 0.00 0.00 0.00 4.26
6643 10181 5.659048 AGAAGAACAACAGTTTTCGCTAG 57.341 39.130 0.00 0.00 0.00 3.42
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.141053 AGGCAAAGGTGTCTCGTCTTT 59.859 47.619 0.00 0.00 33.04 2.52
3 4 0.318762 GAGGCAAAGGTGTCTCGTCT 59.681 55.000 0.00 0.00 46.09 4.18
8 9 2.093973 CGTGATAGAGGCAAAGGTGTCT 60.094 50.000 0.00 0.00 44.41 3.41
10 11 1.676014 GCGTGATAGAGGCAAAGGTGT 60.676 52.381 0.00 0.00 35.42 4.16
11 12 1.009829 GCGTGATAGAGGCAAAGGTG 58.990 55.000 0.00 0.00 35.42 4.00
12 13 0.460284 CGCGTGATAGAGGCAAAGGT 60.460 55.000 0.00 0.00 35.00 3.50
13 14 1.766143 GCGCGTGATAGAGGCAAAGG 61.766 60.000 8.43 0.00 35.00 3.11
14 15 1.638467 GCGCGTGATAGAGGCAAAG 59.362 57.895 8.43 0.00 35.00 2.77
15 16 2.164663 CGCGCGTGATAGAGGCAAA 61.165 57.895 24.19 0.00 35.00 3.68
16 17 2.582226 CGCGCGTGATAGAGGCAA 60.582 61.111 24.19 0.00 35.00 4.52
20 21 3.026879 CCTGCGCGCGTGATAGAG 61.027 66.667 32.35 15.95 0.00 2.43
21 22 4.569023 CCCTGCGCGCGTGATAGA 62.569 66.667 32.35 5.62 0.00 1.98
142 143 4.159266 AGCTAGCGCTCCGTATCA 57.841 55.556 16.34 0.00 45.15 2.15
221 223 1.133482 CCCTAATCCGCCCAATCCTTT 60.133 52.381 0.00 0.00 0.00 3.11
238 240 3.391382 CGACGCTCCCCTTTCCCT 61.391 66.667 0.00 0.00 0.00 4.20
257 259 1.446966 GCTCACTTCACTCCGCTCC 60.447 63.158 0.00 0.00 0.00 4.70
276 288 0.674895 CCTCCTCCGAAGCAAACCTG 60.675 60.000 0.00 0.00 0.00 4.00
293 306 4.100189 CCCATCTCGACTCTACAAAATCCT 59.900 45.833 0.00 0.00 0.00 3.24
303 316 2.430610 GCTGGCCCATCTCGACTCT 61.431 63.158 0.00 0.00 0.00 3.24
305 318 3.842923 CGCTGGCCCATCTCGACT 61.843 66.667 0.00 0.00 0.00 4.18
330 343 3.438088 CGTTCGTCACGTCAGCTC 58.562 61.111 0.00 0.00 44.49 4.09
379 393 1.422161 GCACCCCTCATATCCAGCCT 61.422 60.000 0.00 0.00 0.00 4.58
399 413 2.639065 GACAAATATTCGGGCTGACCA 58.361 47.619 0.00 0.00 40.22 4.02
406 420 2.032680 ACCACGGACAAATATTCGGG 57.967 50.000 0.00 0.00 0.00 5.14
410 424 4.156008 GCTCTCAAACCACGGACAAATATT 59.844 41.667 0.00 0.00 0.00 1.28
412 426 3.071479 GCTCTCAAACCACGGACAAATA 58.929 45.455 0.00 0.00 0.00 1.40
413 427 1.880027 GCTCTCAAACCACGGACAAAT 59.120 47.619 0.00 0.00 0.00 2.32
424 438 0.875059 CCCAACCGAAGCTCTCAAAC 59.125 55.000 0.00 0.00 0.00 2.93
464 478 1.376037 CCTCTCAAACCGGCAGACC 60.376 63.158 0.00 0.00 0.00 3.85
467 481 1.291877 CGAACCTCTCAAACCGGCAG 61.292 60.000 0.00 0.00 0.00 4.85
468 482 1.301401 CGAACCTCTCAAACCGGCA 60.301 57.895 0.00 0.00 0.00 5.69
469 483 2.033194 CCGAACCTCTCAAACCGGC 61.033 63.158 0.00 0.00 0.00 6.13
471 485 1.004918 AGCCGAACCTCTCAAACCG 60.005 57.895 0.00 0.00 0.00 4.44
473 487 2.171341 AAGAGCCGAACCTCTCAAAC 57.829 50.000 1.60 0.00 41.19 2.93
474 488 5.221461 GGATATAAGAGCCGAACCTCTCAAA 60.221 44.000 1.60 0.00 41.19 2.69
475 489 4.281182 GGATATAAGAGCCGAACCTCTCAA 59.719 45.833 1.60 0.00 41.19 3.02
476 490 3.827302 GGATATAAGAGCCGAACCTCTCA 59.173 47.826 1.60 0.00 41.19 3.27
477 491 3.193903 GGGATATAAGAGCCGAACCTCTC 59.806 52.174 1.60 0.00 41.19 3.20
478 492 3.166679 GGGATATAAGAGCCGAACCTCT 58.833 50.000 0.00 0.00 43.81 3.69
479 493 2.094649 CGGGATATAAGAGCCGAACCTC 60.095 54.545 0.00 0.00 32.70 3.85
481 495 1.617357 ACGGGATATAAGAGCCGAACC 59.383 52.381 0.00 0.00 32.70 3.62
484 498 0.601558 GCACGGGATATAAGAGCCGA 59.398 55.000 0.00 0.00 32.70 5.54
486 500 1.344763 AGTGCACGGGATATAAGAGCC 59.655 52.381 12.01 0.00 0.00 4.70
498 550 0.591170 AATTTCGTGGAAGTGCACGG 59.409 50.000 22.46 6.92 44.03 4.94
499 551 2.720590 CGTAATTTCGTGGAAGTGCACG 60.721 50.000 17.91 17.91 45.09 5.34
500 552 2.477375 TCGTAATTTCGTGGAAGTGCAC 59.523 45.455 9.40 9.40 0.00 4.57
501 553 2.477375 GTCGTAATTTCGTGGAAGTGCA 59.523 45.455 4.34 0.00 0.00 4.57
502 554 2.477375 TGTCGTAATTTCGTGGAAGTGC 59.523 45.455 4.34 0.00 0.00 4.40
543 1948 1.818674 CATTTACACAGGGGCTGGTTC 59.181 52.381 0.00 0.00 35.51 3.62
544 1949 1.146982 ACATTTACACAGGGGCTGGTT 59.853 47.619 0.00 0.00 35.51 3.67
545 1950 0.777446 ACATTTACACAGGGGCTGGT 59.223 50.000 0.00 0.00 35.51 4.00
568 1973 2.261671 CCTTCTCACCCGTGTCCG 59.738 66.667 0.00 0.00 0.00 4.79
603 2008 3.741476 CCAGCTGGCGTTGCTTCC 61.741 66.667 22.33 0.00 38.92 3.46
703 2114 1.294459 GGGTCGGGTTTTACTCGCT 59.706 57.895 0.00 0.00 42.90 4.93
889 2343 0.392998 GCTGGTCTATGTGGTGGTGG 60.393 60.000 0.00 0.00 0.00 4.61
890 2344 0.392998 GGCTGGTCTATGTGGTGGTG 60.393 60.000 0.00 0.00 0.00 4.17
1054 2515 1.264749 TAGGTGAGGCGCTTCCACAT 61.265 55.000 17.65 16.43 37.75 3.21
1055 2516 1.911269 TAGGTGAGGCGCTTCCACA 60.911 57.895 17.65 0.00 37.29 4.17
1391 2865 0.322648 TGCGGATATGATGAGGCTGG 59.677 55.000 0.00 0.00 0.00 4.85
1397 2871 1.620323 CCAGTCCTGCGGATATGATGA 59.380 52.381 0.00 0.00 32.73 2.92
1398 2872 1.620323 TCCAGTCCTGCGGATATGATG 59.380 52.381 0.00 0.00 32.73 3.07
1399 2873 2.015456 TCCAGTCCTGCGGATATGAT 57.985 50.000 0.00 0.00 32.73 2.45
1404 2886 0.107508 CACATTCCAGTCCTGCGGAT 60.108 55.000 0.00 0.00 32.73 4.18
1414 2896 1.019278 CGGACGGGTTCACATTCCAG 61.019 60.000 0.00 0.00 0.00 3.86
1431 2913 1.644786 GCAACCAACGGAGGAATCGG 61.645 60.000 2.13 0.00 0.00 4.18
1445 2927 1.685224 TCCATCAGGACCTGCAACC 59.315 57.895 17.33 0.00 39.61 3.77
1515 2997 3.249189 AACTGGGCCGCCTTGAGA 61.249 61.111 9.86 0.00 0.00 3.27
1807 3289 4.295141 TGAACAGGTAGGTAATGGTTGG 57.705 45.455 0.00 0.00 0.00 3.77
1870 3352 1.405391 CCAATTTCCAATTGTCCGGGC 60.405 52.381 0.00 0.00 0.00 6.13
1946 3428 4.217118 GCTTTCACAGACATTCCAATCACT 59.783 41.667 0.00 0.00 0.00 3.41
2008 3490 0.821301 TTCACAGCACAATTCCCGCA 60.821 50.000 0.00 0.00 0.00 5.69
2062 3544 4.287067 AGCAGGAAAGAATACTCTGTTGGA 59.713 41.667 0.00 0.00 30.03 3.53
2063 3545 4.394300 CAGCAGGAAAGAATACTCTGTTGG 59.606 45.833 0.00 0.00 34.54 3.77
2064 3546 4.142730 GCAGCAGGAAAGAATACTCTGTTG 60.143 45.833 0.00 0.00 38.88 3.33
2065 3547 4.006319 GCAGCAGGAAAGAATACTCTGTT 58.994 43.478 0.00 0.00 30.03 3.16
2066 3548 3.262915 AGCAGCAGGAAAGAATACTCTGT 59.737 43.478 0.00 0.00 30.03 3.41
2116 3598 5.126067 GGCAGTTAAAGGATATTCTGCTGA 58.874 41.667 13.22 0.00 44.81 4.26
2120 3602 7.814264 AGAATGGCAGTTAAAGGATATTCTG 57.186 36.000 0.00 0.00 33.71 3.02
2139 3621 5.640189 ATGAGTTGCCTTTCTGAAGAATG 57.360 39.130 0.00 0.00 34.71 2.67
2140 3622 7.114754 TCATATGAGTTGCCTTTCTGAAGAAT 58.885 34.615 0.00 0.00 34.71 2.40
2142 3624 6.053632 TCATATGAGTTGCCTTTCTGAAGA 57.946 37.500 0.00 0.00 34.71 2.87
2154 3636 9.987272 TGATATCAGTTAACCTCATATGAGTTG 57.013 33.333 27.03 17.10 40.48 3.16
2156 3638 8.310382 GCTGATATCAGTTAACCTCATATGAGT 58.690 37.037 28.92 14.86 45.45 3.41
2180 3662 8.216423 AGTTGATTTCCATATCAGTCATAAGCT 58.784 33.333 0.00 0.00 36.03 3.74
2314 3802 4.160252 ACGATCCAAATTTCCATTTCCAGG 59.840 41.667 0.00 0.00 29.41 4.45
2357 3845 4.644685 ACAAGTTCAAGCACCACAAATACT 59.355 37.500 0.00 0.00 0.00 2.12
2411 3899 6.774673 TCACAAAGGAAATAGTACCACATCA 58.225 36.000 0.00 0.00 0.00 3.07
2442 3930 3.557595 GCTATTCACCTGTTCGGAATCAG 59.442 47.826 11.13 11.13 33.59 2.90
2478 3966 7.734538 AAAACACACAACAAACTAGAATTCG 57.265 32.000 0.00 0.00 0.00 3.34
2642 4131 6.713903 AGTGATAAAATGAGCATCCGATGATT 59.286 34.615 12.79 0.62 0.00 2.57
2673 4162 4.525912 AAATCATCCTGGCAAAAGACAC 57.474 40.909 0.00 0.00 0.00 3.67
3046 4538 3.826466 GCACACAGCCTGAAACTTAATC 58.174 45.455 0.00 0.00 37.23 1.75
3104 4615 6.521151 AAACCATGATGACTGAATCCTTTC 57.479 37.500 0.00 0.00 0.00 2.62
3253 4764 5.242434 TCACTGTAAAAGCATACACCGATT 58.758 37.500 0.00 0.00 32.56 3.34
3273 4790 6.668323 TGCTTTGCTTAGTCTAAACAATCAC 58.332 36.000 8.82 3.81 0.00 3.06
3351 4868 4.208746 CTCTGACGGAGGGAGTAGTTTAT 58.791 47.826 3.07 0.00 38.35 1.40
3361 4878 2.997315 TGCCACTCTGACGGAGGG 60.997 66.667 15.76 11.47 45.83 4.30
3362 4879 1.821061 AACTGCCACTCTGACGGAGG 61.821 60.000 15.76 0.73 45.83 4.30
3364 4881 1.367471 CAACTGCCACTCTGACGGA 59.633 57.895 0.00 0.00 0.00 4.69
3365 4882 1.069765 ACAACTGCCACTCTGACGG 59.930 57.895 0.00 0.00 0.00 4.79
3366 4883 0.249447 TCACAACTGCCACTCTGACG 60.249 55.000 0.00 0.00 0.00 4.35
3367 4884 2.175878 ATCACAACTGCCACTCTGAC 57.824 50.000 0.00 0.00 0.00 3.51
3369 4886 3.044235 TGTATCACAACTGCCACTCTG 57.956 47.619 0.00 0.00 0.00 3.35
3371 4888 3.753272 ACAATGTATCACAACTGCCACTC 59.247 43.478 0.00 0.00 0.00 3.51
3373 4890 3.424829 CGACAATGTATCACAACTGCCAC 60.425 47.826 0.00 0.00 0.00 5.01
3374 4891 2.741517 CGACAATGTATCACAACTGCCA 59.258 45.455 0.00 0.00 0.00 4.92
3375 4892 3.000041 TCGACAATGTATCACAACTGCC 59.000 45.455 0.00 0.00 0.00 4.85
3376 4893 4.394795 GTTCGACAATGTATCACAACTGC 58.605 43.478 0.00 0.00 0.00 4.40
3377 4894 4.628081 CGTTCGACAATGTATCACAACTG 58.372 43.478 0.00 0.00 0.00 3.16
3378 4895 3.122948 GCGTTCGACAATGTATCACAACT 59.877 43.478 0.00 0.00 0.00 3.16
3379 4896 3.122948 AGCGTTCGACAATGTATCACAAC 59.877 43.478 0.00 0.00 0.00 3.32
3380 4897 3.322369 AGCGTTCGACAATGTATCACAA 58.678 40.909 0.00 0.00 0.00 3.33
3382 4899 4.796830 TCTTAGCGTTCGACAATGTATCAC 59.203 41.667 0.00 0.00 0.00 3.06
3383 4900 4.989044 TCTTAGCGTTCGACAATGTATCA 58.011 39.130 0.00 0.00 0.00 2.15
3384 4901 5.035443 ACTCTTAGCGTTCGACAATGTATC 58.965 41.667 0.00 0.00 0.00 2.24
3386 4903 4.163552 CACTCTTAGCGTTCGACAATGTA 58.836 43.478 0.00 0.00 0.00 2.29
3387 4904 2.987149 CACTCTTAGCGTTCGACAATGT 59.013 45.455 0.00 0.00 0.00 2.71
3388 4905 2.345641 CCACTCTTAGCGTTCGACAATG 59.654 50.000 0.00 0.00 0.00 2.82
3389 4906 2.607187 CCACTCTTAGCGTTCGACAAT 58.393 47.619 0.00 0.00 0.00 2.71
3390 4907 1.933500 GCCACTCTTAGCGTTCGACAA 60.934 52.381 0.00 0.00 0.00 3.18
3391 4908 0.388134 GCCACTCTTAGCGTTCGACA 60.388 55.000 0.00 0.00 0.00 4.35
3392 4909 0.388134 TGCCACTCTTAGCGTTCGAC 60.388 55.000 0.00 0.00 0.00 4.20
3393 4910 0.315886 TTGCCACTCTTAGCGTTCGA 59.684 50.000 0.00 0.00 0.00 3.71
3394 4911 1.144969 TTTGCCACTCTTAGCGTTCG 58.855 50.000 0.00 0.00 0.00 3.95
3395 4912 2.548480 ACTTTTGCCACTCTTAGCGTTC 59.452 45.455 0.00 0.00 0.00 3.95
3396 4913 2.290641 CACTTTTGCCACTCTTAGCGTT 59.709 45.455 0.00 0.00 0.00 4.84
3398 4915 2.143122 TCACTTTTGCCACTCTTAGCG 58.857 47.619 0.00 0.00 0.00 4.26
3400 4917 6.317789 TCATTTCACTTTTGCCACTCTTAG 57.682 37.500 0.00 0.00 0.00 2.18
3401 4918 6.707440 TTCATTTCACTTTTGCCACTCTTA 57.293 33.333 0.00 0.00 0.00 2.10
3402 4919 5.596836 TTCATTTCACTTTTGCCACTCTT 57.403 34.783 0.00 0.00 0.00 2.85
3406 4923 9.597999 GATAAATTTTCATTTCACTTTTGCCAC 57.402 29.630 0.00 0.00 34.29 5.01
3409 4926 9.862585 AACGATAAATTTTCATTTCACTTTTGC 57.137 25.926 0.00 0.00 34.29 3.68
3414 4931 9.862585 GCAAAAACGATAAATTTTCATTTCACT 57.137 25.926 0.00 0.00 34.29 3.41
3415 4932 9.101971 GGCAAAAACGATAAATTTTCATTTCAC 57.898 29.630 0.00 0.00 34.29 3.18
3416 4933 8.830580 TGGCAAAAACGATAAATTTTCATTTCA 58.169 25.926 0.00 0.00 34.29 2.69
3417 4934 9.824534 ATGGCAAAAACGATAAATTTTCATTTC 57.175 25.926 0.00 0.00 34.29 2.17
3418 4935 9.609950 CATGGCAAAAACGATAAATTTTCATTT 57.390 25.926 0.00 0.00 36.52 2.32
3419 4936 8.235905 CCATGGCAAAAACGATAAATTTTCATT 58.764 29.630 0.00 0.00 0.00 2.57
3420 4937 7.605691 TCCATGGCAAAAACGATAAATTTTCAT 59.394 29.630 6.96 0.00 0.00 2.57
3421 4938 6.931281 TCCATGGCAAAAACGATAAATTTTCA 59.069 30.769 6.96 0.00 0.00 2.69
3422 4939 7.357951 TCCATGGCAAAAACGATAAATTTTC 57.642 32.000 6.96 0.00 0.00 2.29
3424 4941 7.148272 CCATTCCATGGCAAAAACGATAAATTT 60.148 33.333 6.96 0.00 44.70 1.82
3425 4942 6.315891 CCATTCCATGGCAAAAACGATAAATT 59.684 34.615 6.96 0.00 44.70 1.82
3426 4943 5.816777 CCATTCCATGGCAAAAACGATAAAT 59.183 36.000 6.96 0.00 44.70 1.40
3427 4944 5.174395 CCATTCCATGGCAAAAACGATAAA 58.826 37.500 6.96 0.00 44.70 1.40
3428 4945 4.753233 CCATTCCATGGCAAAAACGATAA 58.247 39.130 6.96 0.00 44.70 1.75
3429 4946 4.383850 CCATTCCATGGCAAAAACGATA 57.616 40.909 6.96 0.00 44.70 2.92
3430 4947 3.249986 CCATTCCATGGCAAAAACGAT 57.750 42.857 6.96 0.00 44.70 3.73
3431 4948 2.739885 CCATTCCATGGCAAAAACGA 57.260 45.000 6.96 0.00 44.70 3.85
3441 4958 4.131649 ACATCACAAATGCCATTCCATG 57.868 40.909 0.00 0.00 0.00 3.66
3442 4959 6.126997 ACAATACATCACAAATGCCATTCCAT 60.127 34.615 0.00 0.00 0.00 3.41
3443 4960 5.187381 ACAATACATCACAAATGCCATTCCA 59.813 36.000 0.00 0.00 0.00 3.53
3444 4961 5.663456 ACAATACATCACAAATGCCATTCC 58.337 37.500 0.00 0.00 0.00 3.01
3445 4962 6.331845 TGACAATACATCACAAATGCCATTC 58.668 36.000 0.00 0.00 0.00 2.67
3446 4963 6.283544 TGACAATACATCACAAATGCCATT 57.716 33.333 0.00 0.00 0.00 3.16
3447 4964 5.918426 TGACAATACATCACAAATGCCAT 57.082 34.783 0.00 0.00 0.00 4.40
3448 4965 5.718724 TTGACAATACATCACAAATGCCA 57.281 34.783 0.00 0.00 0.00 4.92
3449 4966 6.401367 GCTTTTGACAATACATCACAAATGCC 60.401 38.462 1.25 0.00 41.34 4.40
3450 4967 6.401367 GGCTTTTGACAATACATCACAAATGC 60.401 38.462 2.99 2.99 43.75 3.56
3451 4968 6.645827 TGGCTTTTGACAATACATCACAAATG 59.354 34.615 0.00 0.00 32.20 2.32
3452 4969 6.757237 TGGCTTTTGACAATACATCACAAAT 58.243 32.000 0.00 0.00 32.20 2.32
3453 4970 6.154203 TGGCTTTTGACAATACATCACAAA 57.846 33.333 0.00 0.00 32.20 2.83
3454 4971 5.781210 TGGCTTTTGACAATACATCACAA 57.219 34.783 0.00 0.00 32.20 3.33
3455 4972 5.781210 TTGGCTTTTGACAATACATCACA 57.219 34.783 0.00 0.00 43.63 3.58
3474 4991 9.129567 TTGACATATCACTTTTGCCACTCTTGG 62.130 40.741 0.00 0.00 39.39 3.61
3478 4995 5.627499 TTGACATATCACTTTTGCCACTC 57.373 39.130 0.00 0.00 33.38 3.51
3479 4996 6.594788 ATTTGACATATCACTTTTGCCACT 57.405 33.333 0.00 0.00 33.38 4.00
3480 4997 7.092716 AGAATTTGACATATCACTTTTGCCAC 58.907 34.615 0.00 0.00 33.38 5.01
3482 4999 8.677300 TCTAGAATTTGACATATCACTTTTGCC 58.323 33.333 0.00 0.00 33.38 4.52
3483 5000 9.713740 CTCTAGAATTTGACATATCACTTTTGC 57.286 33.333 0.00 0.00 33.38 3.68
3489 5006 6.763135 TGCCACTCTAGAATTTGACATATCAC 59.237 38.462 0.00 0.00 33.38 3.06
3491 5008 7.976135 ATGCCACTCTAGAATTTGACATATC 57.024 36.000 0.00 0.00 0.00 1.63
3497 5014 5.744171 TGCTTATGCCACTCTAGAATTTGA 58.256 37.500 0.00 0.00 38.71 2.69
3502 5019 6.127647 CCAATTTTGCTTATGCCACTCTAGAA 60.128 38.462 0.00 0.00 38.71 2.10
3503 5020 5.357878 CCAATTTTGCTTATGCCACTCTAGA 59.642 40.000 0.00 0.00 38.71 2.43
3507 5024 2.931969 GCCAATTTTGCTTATGCCACTC 59.068 45.455 0.00 0.00 38.71 3.51
3508 5025 2.302445 TGCCAATTTTGCTTATGCCACT 59.698 40.909 0.00 0.00 38.71 4.00
3509 5026 2.697654 TGCCAATTTTGCTTATGCCAC 58.302 42.857 0.00 0.00 38.71 5.01
3511 5028 4.725359 CTTTTGCCAATTTTGCTTATGCC 58.275 39.130 0.00 0.00 38.71 4.40
3512 5029 4.160594 GCTTTTGCCAATTTTGCTTATGC 58.839 39.130 0.00 0.00 40.15 3.14
3528 5045 4.681744 TGTTTTTGCCACTCTAGCTTTTG 58.318 39.130 0.00 0.00 0.00 2.44
3529 5046 5.337578 TTGTTTTTGCCACTCTAGCTTTT 57.662 34.783 0.00 0.00 0.00 2.27
3531 5048 4.402474 ACTTTGTTTTTGCCACTCTAGCTT 59.598 37.500 0.00 0.00 0.00 3.74
3533 5050 4.307443 ACTTTGTTTTTGCCACTCTAGC 57.693 40.909 0.00 0.00 0.00 3.42
3534 5051 6.255670 GGAAAACTTTGTTTTTGCCACTCTAG 59.744 38.462 9.36 0.00 32.30 2.43
3535 5052 6.103330 GGAAAACTTTGTTTTTGCCACTCTA 58.897 36.000 9.36 0.00 32.30 2.43
3536 5053 4.935205 GGAAAACTTTGTTTTTGCCACTCT 59.065 37.500 9.36 0.00 32.30 3.24
3537 5054 5.216566 GGAAAACTTTGTTTTTGCCACTC 57.783 39.130 9.36 0.00 32.30 3.51
3542 5059 4.697828 TCAAGGGGAAAACTTTGTTTTTGC 59.302 37.500 9.36 0.00 36.39 3.68
3543 5060 6.809630 TTCAAGGGGAAAACTTTGTTTTTG 57.190 33.333 9.36 4.64 30.98 2.44
3556 5073 6.014669 CACAAATGGTATCTTTTCAAGGGGAA 60.015 38.462 0.00 0.00 0.00 3.97
3558 5075 5.245977 ACACAAATGGTATCTTTTCAAGGGG 59.754 40.000 0.00 0.00 0.00 4.79
3560 5077 5.634859 GCACACAAATGGTATCTTTTCAAGG 59.365 40.000 0.00 0.00 0.00 3.61
3643 5318 3.788227 TGCAGGATACCTCAAAACACT 57.212 42.857 0.00 0.00 37.17 3.55
3771 5447 8.508062 GTGGGAAAGTTCTTAGAAATCTCTTTC 58.492 37.037 19.07 19.07 40.95 2.62
3896 5586 2.919666 ACACAATATGCTCAAACCGC 57.080 45.000 0.00 0.00 0.00 5.68
4142 5832 5.950544 GGGGGCTTTTAACATTTTAGGAT 57.049 39.130 0.00 0.00 0.00 3.24
4182 5872 2.158475 AGACAAAAGCCCAATGTGAGGA 60.158 45.455 0.00 0.00 0.00 3.71
4199 5889 4.518970 CCCTTTTGTGCTTAAGCTAAGACA 59.481 41.667 26.90 19.48 42.66 3.41
4227 5917 2.298729 GCCCAAAAACATGGCACTTAGA 59.701 45.455 0.00 0.00 44.70 2.10
4785 6845 8.595362 AAATAGGAAGGAAAAGGATAAGGTTG 57.405 34.615 0.00 0.00 0.00 3.77
4819 6880 3.073274 AGAATTTTGGGACGGAGGAAG 57.927 47.619 0.00 0.00 0.00 3.46
4820 6881 3.153919 CAAGAATTTTGGGACGGAGGAA 58.846 45.455 0.00 0.00 0.00 3.36
4821 6882 2.107552 ACAAGAATTTTGGGACGGAGGA 59.892 45.455 0.00 0.00 0.00 3.71
4822 6883 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
4823 6884 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
4824 6885 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
4825 6886 5.699097 TTAAGACAAGAATTTTGGGACGG 57.301 39.130 0.00 0.00 0.00 4.79
4826 6887 8.487176 CAAATTTAAGACAAGAATTTTGGGACG 58.513 33.333 0.00 0.00 32.35 4.79
4827 6888 9.325198 ACAAATTTAAGACAAGAATTTTGGGAC 57.675 29.630 0.00 0.00 33.39 4.46
4828 6889 9.541143 GACAAATTTAAGACAAGAATTTTGGGA 57.459 29.630 0.00 0.00 33.39 4.37
4829 6890 9.546428 AGACAAATTTAAGACAAGAATTTTGGG 57.454 29.630 0.00 0.00 33.39 4.12
4860 6921 8.742777 TCACGTTTTAGTATTAGGTACATCTGT 58.257 33.333 0.00 0.00 35.67 3.41
4861 6922 9.017669 GTCACGTTTTAGTATTAGGTACATCTG 57.982 37.037 0.00 0.00 35.67 2.90
4862 6923 8.964772 AGTCACGTTTTAGTATTAGGTACATCT 58.035 33.333 0.00 0.00 35.67 2.90
4863 6924 9.578439 AAGTCACGTTTTAGTATTAGGTACATC 57.422 33.333 0.00 0.00 35.67 3.06
4864 6925 9.362539 CAAGTCACGTTTTAGTATTAGGTACAT 57.637 33.333 0.00 0.00 35.67 2.29
4865 6926 8.575589 TCAAGTCACGTTTTAGTATTAGGTACA 58.424 33.333 0.00 0.00 35.67 2.90
4866 6927 8.970691 TCAAGTCACGTTTTAGTATTAGGTAC 57.029 34.615 0.00 0.00 0.00 3.34
4868 6929 9.578439 GTATCAAGTCACGTTTTAGTATTAGGT 57.422 33.333 0.00 0.00 0.00 3.08
4869 6930 9.577110 TGTATCAAGTCACGTTTTAGTATTAGG 57.423 33.333 0.00 0.00 0.00 2.69
4872 6933 9.095065 GGATGTATCAAGTCACGTTTTAGTATT 57.905 33.333 0.00 0.00 0.00 1.89
4873 6934 7.434307 CGGATGTATCAAGTCACGTTTTAGTAT 59.566 37.037 0.00 0.00 0.00 2.12
4874 6935 6.748658 CGGATGTATCAAGTCACGTTTTAGTA 59.251 38.462 0.00 0.00 0.00 1.82
4875 6936 5.575606 CGGATGTATCAAGTCACGTTTTAGT 59.424 40.000 0.00 0.00 0.00 2.24
4876 6937 5.575606 ACGGATGTATCAAGTCACGTTTTAG 59.424 40.000 0.00 0.00 0.00 1.85
4877 6938 5.472148 ACGGATGTATCAAGTCACGTTTTA 58.528 37.500 0.00 0.00 0.00 1.52
4878 6939 4.312443 ACGGATGTATCAAGTCACGTTTT 58.688 39.130 0.00 0.00 0.00 2.43
4879 6940 3.921677 ACGGATGTATCAAGTCACGTTT 58.078 40.909 0.00 0.00 0.00 3.60
4880 6941 3.587797 ACGGATGTATCAAGTCACGTT 57.412 42.857 0.00 0.00 0.00 3.99
4881 6942 4.913335 ATACGGATGTATCAAGTCACGT 57.087 40.909 0.00 0.00 36.56 4.49
4882 6943 7.113124 GTCTAAATACGGATGTATCAAGTCACG 59.887 40.741 0.00 0.00 40.42 4.35
4883 6944 7.919091 TGTCTAAATACGGATGTATCAAGTCAC 59.081 37.037 0.00 0.00 40.42 3.67
4884 6945 8.002984 TGTCTAAATACGGATGTATCAAGTCA 57.997 34.615 0.00 0.00 40.42 3.41
4885 6946 8.867112 TTGTCTAAATACGGATGTATCAAGTC 57.133 34.615 0.00 0.00 40.42 3.01
4886 6947 9.832445 ATTTGTCTAAATACGGATGTATCAAGT 57.168 29.630 0.00 0.00 40.42 3.16
4893 6954 9.530633 GTCTTAGATTTGTCTAAATACGGATGT 57.469 33.333 0.26 0.00 36.66 3.06
4894 6955 9.529325 TGTCTTAGATTTGTCTAAATACGGATG 57.471 33.333 0.26 0.00 36.66 3.51
4896 6957 9.582431 CTTGTCTTAGATTTGTCTAAATACGGA 57.418 33.333 0.26 0.00 36.66 4.69
4897 6958 9.582431 TCTTGTCTTAGATTTGTCTAAATACGG 57.418 33.333 0.26 0.99 36.66 4.02
4905 6966 9.354673 TCCAAAATTCTTGTCTTAGATTTGTCT 57.645 29.630 0.00 0.00 28.79 3.41
4906 6967 9.965824 TTCCAAAATTCTTGTCTTAGATTTGTC 57.034 29.630 0.00 0.00 28.79 3.18
4907 6968 9.750125 GTTCCAAAATTCTTGTCTTAGATTTGT 57.250 29.630 0.00 0.00 28.79 2.83
4908 6969 8.905702 CGTTCCAAAATTCTTGTCTTAGATTTG 58.094 33.333 0.00 0.00 29.84 2.32
4909 6970 8.082242 CCGTTCCAAAATTCTTGTCTTAGATTT 58.918 33.333 0.00 0.00 0.00 2.17
4910 6971 7.447238 TCCGTTCCAAAATTCTTGTCTTAGATT 59.553 33.333 0.00 0.00 0.00 2.40
4911 6972 6.940298 TCCGTTCCAAAATTCTTGTCTTAGAT 59.060 34.615 0.00 0.00 0.00 1.98
4912 6973 6.292923 TCCGTTCCAAAATTCTTGTCTTAGA 58.707 36.000 0.00 0.00 0.00 2.10
4913 6974 6.348540 CCTCCGTTCCAAAATTCTTGTCTTAG 60.349 42.308 0.00 0.00 0.00 2.18
4914 6975 5.472137 CCTCCGTTCCAAAATTCTTGTCTTA 59.528 40.000 0.00 0.00 0.00 2.10
4915 6976 4.278419 CCTCCGTTCCAAAATTCTTGTCTT 59.722 41.667 0.00 0.00 0.00 3.01
4916 6977 3.821033 CCTCCGTTCCAAAATTCTTGTCT 59.179 43.478 0.00 0.00 0.00 3.41
4917 6978 3.057526 CCCTCCGTTCCAAAATTCTTGTC 60.058 47.826 0.00 0.00 0.00 3.18
4918 6979 2.890945 CCCTCCGTTCCAAAATTCTTGT 59.109 45.455 0.00 0.00 0.00 3.16
4919 6980 3.153919 TCCCTCCGTTCCAAAATTCTTG 58.846 45.455 0.00 0.00 0.00 3.02
4920 6981 3.181433 ACTCCCTCCGTTCCAAAATTCTT 60.181 43.478 0.00 0.00 0.00 2.52
4921 6982 2.375509 ACTCCCTCCGTTCCAAAATTCT 59.624 45.455 0.00 0.00 0.00 2.40
4922 6983 2.791655 ACTCCCTCCGTTCCAAAATTC 58.208 47.619 0.00 0.00 0.00 2.17
4923 6984 2.971901 ACTCCCTCCGTTCCAAAATT 57.028 45.000 0.00 0.00 0.00 1.82
4924 6985 4.586306 AATACTCCCTCCGTTCCAAAAT 57.414 40.909 0.00 0.00 0.00 1.82
4925 6986 4.533311 AGTAATACTCCCTCCGTTCCAAAA 59.467 41.667 0.00 0.00 0.00 2.44
4926 6987 4.098894 AGTAATACTCCCTCCGTTCCAAA 58.901 43.478 0.00 0.00 0.00 3.28
4927 6988 3.716431 AGTAATACTCCCTCCGTTCCAA 58.284 45.455 0.00 0.00 0.00 3.53
4928 6989 3.393426 AGTAATACTCCCTCCGTTCCA 57.607 47.619 0.00 0.00 0.00 3.53
4929 6990 4.750021 AAAGTAATACTCCCTCCGTTCC 57.250 45.455 0.00 0.00 0.00 3.62
4930 6991 6.404708 AGAAAAAGTAATACTCCCTCCGTTC 58.595 40.000 0.00 0.00 0.00 3.95
4931 6992 6.370186 AGAAAAAGTAATACTCCCTCCGTT 57.630 37.500 0.00 0.00 0.00 4.44
4932 6993 6.212993 AGAAGAAAAAGTAATACTCCCTCCGT 59.787 38.462 0.00 0.00 0.00 4.69
4933 6994 6.535508 CAGAAGAAAAAGTAATACTCCCTCCG 59.464 42.308 0.00 0.00 0.00 4.63
4934 6995 6.316640 GCAGAAGAAAAAGTAATACTCCCTCC 59.683 42.308 0.00 0.00 0.00 4.30
4935 6996 6.879458 TGCAGAAGAAAAAGTAATACTCCCTC 59.121 38.462 0.00 0.00 0.00 4.30
4936 6997 6.655425 GTGCAGAAGAAAAAGTAATACTCCCT 59.345 38.462 0.00 0.00 0.00 4.20
4937 6998 6.430000 TGTGCAGAAGAAAAAGTAATACTCCC 59.570 38.462 0.00 0.00 0.00 4.30
4938 6999 7.173390 AGTGTGCAGAAGAAAAAGTAATACTCC 59.827 37.037 0.00 0.00 0.00 3.85
4939 7000 8.089115 AGTGTGCAGAAGAAAAAGTAATACTC 57.911 34.615 0.00 0.00 0.00 2.59
4940 7001 8.345565 CAAGTGTGCAGAAGAAAAAGTAATACT 58.654 33.333 0.00 0.00 0.00 2.12
4941 7002 7.591426 CCAAGTGTGCAGAAGAAAAAGTAATAC 59.409 37.037 0.00 0.00 0.00 1.89
4942 7003 7.284489 ACCAAGTGTGCAGAAGAAAAAGTAATA 59.716 33.333 0.00 0.00 0.00 0.98
4943 7004 6.096846 ACCAAGTGTGCAGAAGAAAAAGTAAT 59.903 34.615 0.00 0.00 0.00 1.89
4993 7054 3.728845 ACAGAACACATGACGCTAACTT 58.271 40.909 0.00 0.00 0.00 2.66
5023 7085 7.278868 CCATTCTATTCCACAGAAGAAGTACAC 59.721 40.741 0.00 0.00 35.57 2.90
5029 7091 6.778821 TGTTCCATTCTATTCCACAGAAGAA 58.221 36.000 0.00 0.00 35.57 2.52
5035 7097 5.584649 GTCGATTGTTCCATTCTATTCCACA 59.415 40.000 0.00 0.00 0.00 4.17
5191 7369 9.760077 CAAATCGTATTACTATGTTAGTCCCTT 57.240 33.333 0.00 0.00 40.14 3.95
5227 7405 0.320421 ATGCGCCAACTAACGACTGT 60.320 50.000 4.18 0.00 0.00 3.55
5230 7408 0.793861 TCAATGCGCCAACTAACGAC 59.206 50.000 4.18 0.00 0.00 4.34
5242 7420 2.161410 TGGAACGGAAGAAATCAATGCG 59.839 45.455 0.00 0.00 0.00 4.73
5301 7479 3.425359 CCTTCATTAGCTGCACAAAGACG 60.425 47.826 1.02 0.00 0.00 4.18
5328 7506 1.578206 GCGGAGTTGTTGCCTTCTCC 61.578 60.000 0.00 0.00 41.91 3.71
5346 7524 1.888512 TCCATCTTTTGTTCAGCAGGC 59.111 47.619 0.00 0.00 0.00 4.85
5485 7663 1.067565 GCTGTGAGTGTCGGAAGATGA 60.068 52.381 0.00 0.00 45.19 2.92
5586 7764 3.689161 TGTTCACAATAAGCTTCCCATCG 59.311 43.478 0.00 0.00 0.00 3.84
5633 7811 0.103208 GACCAGCCACTACTCGATGG 59.897 60.000 0.00 0.00 39.16 3.51
5634 7812 0.103208 GGACCAGCCACTACTCGATG 59.897 60.000 0.00 0.00 36.34 3.84
5646 7824 1.147153 GAGTAGCCATGGGACCAGC 59.853 63.158 15.13 0.00 0.00 4.85
5648 7826 1.490490 GAATGAGTAGCCATGGGACCA 59.510 52.381 15.13 0.00 0.00 4.02
5685 7863 9.429109 TGATTTACCACTATACACTCTTGGATA 57.571 33.333 0.00 0.00 0.00 2.59
5686 7864 8.319057 TGATTTACCACTATACACTCTTGGAT 57.681 34.615 0.00 0.00 0.00 3.41
5687 7865 7.727578 TGATTTACCACTATACACTCTTGGA 57.272 36.000 0.00 0.00 0.00 3.53
5688 7866 7.987458 ACATGATTTACCACTATACACTCTTGG 59.013 37.037 0.00 0.00 0.00 3.61
5762 7944 1.823899 CGCTAGGGCATTTGGGACC 60.824 63.158 0.00 0.00 38.60 4.46
5799 7981 5.592054 TCAGACTAAAGAATACGCAGATGG 58.408 41.667 0.00 0.00 0.00 3.51
5815 7997 5.867174 CCAACGTACATGACATTTCAGACTA 59.133 40.000 0.00 0.00 34.35 2.59
5888 8070 2.916716 GGCAACGCACACAAATCTAATG 59.083 45.455 0.00 0.00 0.00 1.90
5966 8150 3.072184 AGGCATCATCCCATGTTCTCTAC 59.928 47.826 0.00 0.00 0.00 2.59
5999 8183 6.573664 TCCACAATCTTAAAGTCCAACATG 57.426 37.500 0.00 0.00 0.00 3.21
6017 8201 0.319083 AACGGTAGCACGATTCCACA 59.681 50.000 2.50 0.00 37.61 4.17
6050 8234 3.760673 GCGAGAAGCGAGTGACAG 58.239 61.111 0.00 0.00 44.57 3.51
6085 8270 0.615331 GATCTGTGCAAGGTCCAGGA 59.385 55.000 0.00 0.00 28.63 3.86
6086 8271 0.617413 AGATCTGTGCAAGGTCCAGG 59.383 55.000 0.00 0.00 36.60 4.45
6117 8302 6.224584 TCACGAACCAGTTGAAACATATACA 58.775 36.000 0.00 0.00 0.00 2.29
6118 8303 6.715344 TCACGAACCAGTTGAAACATATAC 57.285 37.500 0.00 0.00 0.00 1.47
6119 8304 7.572353 GCTTTCACGAACCAGTTGAAACATATA 60.572 37.037 0.00 0.00 0.00 0.86
6121 8306 5.504994 GCTTTCACGAACCAGTTGAAACATA 60.505 40.000 0.00 0.00 0.00 2.29
6122 8307 4.733523 GCTTTCACGAACCAGTTGAAACAT 60.734 41.667 0.00 0.00 0.00 2.71
6123 8308 3.426963 GCTTTCACGAACCAGTTGAAACA 60.427 43.478 0.00 0.00 0.00 2.83
6124 8309 3.105937 GCTTTCACGAACCAGTTGAAAC 58.894 45.455 0.00 0.00 0.00 2.78
6128 8313 2.159448 TGTTGCTTTCACGAACCAGTTG 60.159 45.455 0.00 0.00 0.00 3.16
6129 8314 2.088423 TGTTGCTTTCACGAACCAGTT 58.912 42.857 0.00 0.00 0.00 3.16
6130 8315 1.400494 GTGTTGCTTTCACGAACCAGT 59.600 47.619 0.00 0.00 0.00 4.00
6131 8316 2.105323 GTGTTGCTTTCACGAACCAG 57.895 50.000 0.00 0.00 0.00 4.00
6139 8324 1.668751 GTCTGAACCGTGTTGCTTTCA 59.331 47.619 0.00 0.00 0.00 2.69
6177 9596 1.302285 CCTCAGGGCAGCAACTGAT 59.698 57.895 16.70 0.00 42.33 2.90
6190 9609 6.536582 CCAGTTGAAACATATACAGACCTCAG 59.463 42.308 0.00 0.00 0.00 3.35
6460 9989 4.922103 GGCAACCGCAGATAAGTATAGTAC 59.078 45.833 0.00 0.00 41.24 2.73
6461 9990 5.130292 GGCAACCGCAGATAAGTATAGTA 57.870 43.478 0.00 0.00 41.24 1.82
6462 9991 3.991367 GGCAACCGCAGATAAGTATAGT 58.009 45.455 0.00 0.00 41.24 2.12
6502 10031 2.515926 TAGGCTCAGATAAGCAAGCG 57.484 50.000 0.00 0.00 44.35 4.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.