Multiple sequence alignment - TraesCS7D01G205600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G205600 chr7D 100.000 2760 0 0 1 2760 163200875 163198116 0.000000e+00 5097.0
1 TraesCS7D01G205600 chr7D 85.958 819 98 12 997 1809 163215612 163214805 0.000000e+00 859.0
2 TraesCS7D01G205600 chr7D 85.294 816 102 13 1001 1809 163251263 163250459 0.000000e+00 826.0
3 TraesCS7D01G205600 chr7D 83.628 849 108 16 997 1817 163087507 163086662 0.000000e+00 769.0
4 TraesCS7D01G205600 chr7D 85.913 504 52 15 1873 2369 617015168 617015659 1.130000e-143 520.0
5 TraesCS7D01G205600 chr7D 79.110 517 71 21 1862 2370 433720515 433721002 3.430000e-84 322.0
6 TraesCS7D01G205600 chr7D 76.364 550 79 26 256 786 163088269 163087752 5.900000e-62 248.0
7 TraesCS7D01G205600 chr7D 76.190 399 63 19 1873 2265 608220691 608220319 6.070000e-42 182.0
8 TraesCS7D01G205600 chr7D 82.517 143 22 2 490 632 163127861 163127722 3.730000e-24 122.0
9 TraesCS7D01G205600 chr7D 81.308 107 4 8 891 997 163251404 163251314 3.810000e-09 73.1
10 TraesCS7D01G205600 chr7D 92.857 42 3 0 1812 1853 611459501 611459460 8.250000e-06 62.1
11 TraesCS7D01G205600 chr7B 94.719 871 35 7 997 1861 125191906 125191041 0.000000e+00 1343.0
12 TraesCS7D01G205600 chr7B 87.823 928 66 31 1 920 125192888 125192000 0.000000e+00 1044.0
13 TraesCS7D01G205600 chr7B 86.098 820 96 13 997 1809 125244252 125243444 0.000000e+00 867.0
14 TraesCS7D01G205600 chr7B 85.854 820 92 18 1001 1809 125356010 125355204 0.000000e+00 850.0
15 TraesCS7D01G205600 chr7B 84.945 817 101 14 997 1796 125186562 125185751 0.000000e+00 808.0
16 TraesCS7D01G205600 chr7B 85.781 647 74 13 1170 1809 125313255 125312620 0.000000e+00 669.0
17 TraesCS7D01G205600 chr7B 85.626 647 75 13 1170 1809 125280443 125279808 0.000000e+00 664.0
18 TraesCS7D01G205600 chr7B 85.820 543 59 13 1274 1809 125221186 125220655 6.680000e-156 560.0
19 TraesCS7D01G205600 chr7B 78.947 475 78 15 1882 2348 627032033 627032493 1.240000e-78 303.0
20 TraesCS7D01G205600 chr7B 81.214 346 37 15 421 747 125187799 125187463 1.270000e-63 254.0
21 TraesCS7D01G205600 chr7B 93.478 92 6 0 2669 2760 125191010 125190919 1.330000e-28 137.0
22 TraesCS7D01G205600 chr7B 94.872 39 2 0 923 961 125356385 125356347 8.250000e-06 62.1
23 TraesCS7D01G205600 chr7A 84.841 818 106 11 1001 1809 164182122 164181314 0.000000e+00 808.0
24 TraesCS7D01G205600 chr7A 85.271 774 98 14 1001 1765 164394035 164393269 0.000000e+00 784.0
25 TraesCS7D01G205600 chr7A 78.288 479 73 17 290 747 163991886 163991418 2.090000e-71 279.0
26 TraesCS7D01G205600 chr7A 78.587 453 65 18 314 747 163949261 163948822 1.260000e-68 270.0
27 TraesCS7D01G205600 chr7A 76.510 298 48 12 256 536 163930351 163930059 2.870000e-30 143.0
28 TraesCS7D01G205600 chr7A 82.796 93 10 6 2280 2367 19728201 19728292 8.200000e-11 78.7
29 TraesCS7D01G205600 chr7A 97.619 42 1 0 1812 1853 688379040 688378999 3.810000e-09 73.1
30 TraesCS7D01G205600 chrUn 84.344 511 68 11 1870 2373 69181197 69181702 8.880000e-135 490.0
31 TraesCS7D01G205600 chr6A 83.235 507 72 12 1873 2373 53943018 53942519 1.170000e-123 453.0
32 TraesCS7D01G205600 chr6D 82.685 514 74 12 1869 2375 423489326 423489831 2.520000e-120 442.0
33 TraesCS7D01G205600 chr6B 82.574 373 57 6 1869 2237 638494728 638495096 3.430000e-84 322.0
34 TraesCS7D01G205600 chr6B 80.408 245 33 11 2380 2616 667066486 667066723 3.650000e-39 172.0
35 TraesCS7D01G205600 chr4A 78.529 503 74 12 1876 2370 740998197 740997721 1.610000e-77 300.0
36 TraesCS7D01G205600 chr5B 79.752 242 44 4 1862 2099 410296528 410296768 1.310000e-38 171.0
37 TraesCS7D01G205600 chr5B 76.923 234 48 5 1863 2091 81392486 81392718 8.020000e-26 128.0
38 TraesCS7D01G205600 chr3B 76.190 294 46 11 2234 2507 783456080 783456369 1.720000e-27 134.0
39 TraesCS7D01G205600 chr2A 81.148 122 20 3 2318 2437 30174609 30174489 8.140000e-16 95.3
40 TraesCS7D01G205600 chr1A 81.148 122 19 4 2318 2437 538638485 538638604 8.140000e-16 95.3
41 TraesCS7D01G205600 chr1B 91.837 49 2 2 1812 1860 234253145 234253099 1.770000e-07 67.6
42 TraesCS7D01G205600 chr2B 97.059 34 1 0 1817 1850 797231653 797231686 1.070000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G205600 chr7D 163198116 163200875 2759 True 5097.00 5097 100.0000 1 2760 1 chr7D.!!$R2 2759
1 TraesCS7D01G205600 chr7D 163214805 163215612 807 True 859.00 859 85.9580 997 1809 1 chr7D.!!$R3 812
2 TraesCS7D01G205600 chr7D 163086662 163088269 1607 True 508.50 769 79.9960 256 1817 2 chr7D.!!$R6 1561
3 TraesCS7D01G205600 chr7D 163250459 163251404 945 True 449.55 826 83.3010 891 1809 2 chr7D.!!$R7 918
4 TraesCS7D01G205600 chr7B 125243444 125244252 808 True 867.00 867 86.0980 997 1809 1 chr7B.!!$R2 812
5 TraesCS7D01G205600 chr7B 125185751 125192888 7137 True 717.20 1343 88.4358 1 2760 5 chr7B.!!$R5 2759
6 TraesCS7D01G205600 chr7B 125312620 125313255 635 True 669.00 669 85.7810 1170 1809 1 chr7B.!!$R4 639
7 TraesCS7D01G205600 chr7B 125279808 125280443 635 True 664.00 664 85.6260 1170 1809 1 chr7B.!!$R3 639
8 TraesCS7D01G205600 chr7B 125220655 125221186 531 True 560.00 560 85.8200 1274 1809 1 chr7B.!!$R1 535
9 TraesCS7D01G205600 chr7B 125355204 125356385 1181 True 456.05 850 90.3630 923 1809 2 chr7B.!!$R6 886
10 TraesCS7D01G205600 chr7A 164181314 164182122 808 True 808.00 808 84.8410 1001 1809 1 chr7A.!!$R4 808
11 TraesCS7D01G205600 chr7A 164393269 164394035 766 True 784.00 784 85.2710 1001 1765 1 chr7A.!!$R5 764
12 TraesCS7D01G205600 chrUn 69181197 69181702 505 False 490.00 490 84.3440 1870 2373 1 chrUn.!!$F1 503
13 TraesCS7D01G205600 chr6D 423489326 423489831 505 False 442.00 442 82.6850 1869 2375 1 chr6D.!!$F1 506

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
776 781 0.032678 CTGCTCACAAGTCGGTCAGT 59.967 55.0 0.0 0.0 0.0 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2019 7751 0.105224 AACATCACGGGTCAACGACA 59.895 50.0 0.0 0.0 37.61 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 1.817740 GCTAGGCTGGTGGTTTGTTGA 60.818 52.381 0.00 0.00 0.00 3.18
88 89 7.496591 TCTGAATAAGTGTAAACAGGTTTTCGT 59.503 33.333 2.37 0.00 34.23 3.85
89 90 7.987649 TGAATAAGTGTAAACAGGTTTTCGTT 58.012 30.769 2.37 0.00 34.23 3.85
120 123 1.136474 CGTTTCAATTGCGCGTGAGTA 60.136 47.619 8.43 0.00 0.00 2.59
177 181 3.510360 TCTTTCTCGTCCCCTTTACTCTG 59.490 47.826 0.00 0.00 0.00 3.35
194 198 7.946655 TTACTCTGTTCTGTAAACTGATGTG 57.053 36.000 0.00 0.00 0.00 3.21
197 201 6.823689 ACTCTGTTCTGTAAACTGATGTGTTT 59.176 34.615 0.00 0.00 42.10 2.83
198 202 7.336931 ACTCTGTTCTGTAAACTGATGTGTTTT 59.663 33.333 0.00 0.00 40.23 2.43
199 203 8.050778 TCTGTTCTGTAAACTGATGTGTTTTT 57.949 30.769 0.00 0.00 40.23 1.94
204 208 9.562583 TTCTGTAAACTGATGTGTTTTTGTTAC 57.437 29.630 0.00 0.00 40.23 2.50
230 234 3.596500 AGTAATGGAAAGGGGTTTAGCCT 59.403 43.478 0.00 0.00 37.43 4.58
238 242 3.451402 AGGGGTTTAGCCTGGTTAAAG 57.549 47.619 14.95 0.00 37.43 1.85
240 244 3.399983 AGGGGTTTAGCCTGGTTAAAGAA 59.600 43.478 14.95 0.00 37.43 2.52
241 245 4.140876 AGGGGTTTAGCCTGGTTAAAGAAA 60.141 41.667 14.95 0.00 37.43 2.52
242 246 4.589798 GGGGTTTAGCCTGGTTAAAGAAAA 59.410 41.667 14.95 0.00 37.43 2.29
275 279 1.827344 TGTCCGTTGCATCTGAGATCT 59.173 47.619 0.00 0.00 0.00 2.75
282 286 2.937519 TGCATCTGAGATCTACGTCCT 58.062 47.619 0.00 0.00 0.00 3.85
315 319 0.609662 GGCGGTACACAGGGTTCTAA 59.390 55.000 0.00 0.00 0.00 2.10
342 346 7.866729 TGAATGTTTTGACAGTAGCGAATTTA 58.133 30.769 0.00 0.00 0.00 1.40
385 389 4.645762 TCTGATGCTCACACTATCTGTC 57.354 45.455 0.00 0.00 0.00 3.51
401 405 8.446273 CACTATCTGTCCTGATTAGTTTTGTTG 58.554 37.037 0.00 0.00 0.00 3.33
402 406 8.157476 ACTATCTGTCCTGATTAGTTTTGTTGT 58.843 33.333 0.00 0.00 0.00 3.32
455 459 1.475682 GCTTTGGCCAAGAGGATGAAG 59.524 52.381 19.48 11.59 36.89 3.02
477 481 8.358148 TGAAGTAGAACTACGATTGAGACTTTT 58.642 33.333 6.37 0.00 40.80 2.27
509 513 0.034186 ATGTAGGTGTGCATGGGTGG 60.034 55.000 0.00 0.00 0.00 4.61
528 532 3.055719 CACGGATGCGTTTGCCCT 61.056 61.111 10.46 0.00 41.78 5.19
538 542 1.742411 GCGTTTGCCCTCATGCTAGTA 60.742 52.381 0.00 0.00 33.98 1.82
539 543 2.205074 CGTTTGCCCTCATGCTAGTAG 58.795 52.381 0.00 0.00 0.00 2.57
540 544 2.418746 CGTTTGCCCTCATGCTAGTAGT 60.419 50.000 0.00 0.00 0.00 2.73
542 546 4.010349 GTTTGCCCTCATGCTAGTAGTTT 58.990 43.478 0.00 0.00 0.00 2.66
544 548 3.107601 TGCCCTCATGCTAGTAGTTTCT 58.892 45.455 0.00 0.00 0.00 2.52
545 549 4.286707 TGCCCTCATGCTAGTAGTTTCTA 58.713 43.478 0.00 0.00 0.00 2.10
546 550 4.342378 TGCCCTCATGCTAGTAGTTTCTAG 59.658 45.833 0.00 0.00 40.01 2.43
547 551 4.585162 GCCCTCATGCTAGTAGTTTCTAGA 59.415 45.833 0.00 0.00 39.57 2.43
548 552 5.278758 GCCCTCATGCTAGTAGTTTCTAGAG 60.279 48.000 0.00 0.00 39.57 2.43
549 553 5.278758 CCCTCATGCTAGTAGTTTCTAGAGC 60.279 48.000 0.00 0.00 39.57 4.09
550 554 5.278758 CCTCATGCTAGTAGTTTCTAGAGCC 60.279 48.000 0.00 0.00 39.57 4.70
551 555 4.276183 TCATGCTAGTAGTTTCTAGAGCCG 59.724 45.833 0.00 0.00 39.57 5.52
610 614 5.693769 AAAATCAAGTATCCTCCCTCGAA 57.306 39.130 0.00 0.00 0.00 3.71
612 616 2.022195 TCAAGTATCCTCCCTCGAACG 58.978 52.381 0.00 0.00 0.00 3.95
627 631 3.994392 CTCGAACGGAAGAAGAATTTCCA 59.006 43.478 5.03 0.00 43.46 3.53
633 637 4.459337 ACGGAAGAAGAATTTCCATTGTCC 59.541 41.667 5.03 0.00 43.46 4.02
644 649 0.890683 CCATTGTCCAACTCCTTGCC 59.109 55.000 0.00 0.00 0.00 4.52
649 654 0.951040 GTCCAACTCCTTGCCGTCAG 60.951 60.000 0.00 0.00 0.00 3.51
681 686 1.007336 CGCCGTGTTCACCTAGACAC 61.007 60.000 3.01 3.01 0.00 3.67
704 709 4.049186 ACAGCAGATTTATTACCGCGTAG 58.951 43.478 4.92 0.00 0.00 3.51
718 723 1.664873 GCGTAGGAGGGTTGAATTCC 58.335 55.000 2.27 0.00 0.00 3.01
735 740 5.357314 TGAATTCCCGTCTGTAACACAAAAA 59.643 36.000 2.27 0.00 0.00 1.94
736 741 6.039941 TGAATTCCCGTCTGTAACACAAAAAT 59.960 34.615 2.27 0.00 0.00 1.82
738 743 6.939132 TTCCCGTCTGTAACACAAAAATAA 57.061 33.333 0.00 0.00 0.00 1.40
740 745 6.727215 TCCCGTCTGTAACACAAAAATAAAC 58.273 36.000 0.00 0.00 0.00 2.01
741 746 6.318144 TCCCGTCTGTAACACAAAAATAAACA 59.682 34.615 0.00 0.00 0.00 2.83
742 747 6.973474 CCCGTCTGTAACACAAAAATAAACAA 59.027 34.615 0.00 0.00 0.00 2.83
743 748 7.166804 CCCGTCTGTAACACAAAAATAAACAAG 59.833 37.037 0.00 0.00 0.00 3.16
745 750 7.698970 CGTCTGTAACACAAAAATAAACAAGGT 59.301 33.333 0.00 0.00 0.00 3.50
746 751 8.803799 GTCTGTAACACAAAAATAAACAAGGTG 58.196 33.333 0.00 0.00 0.00 4.00
747 752 8.524487 TCTGTAACACAAAAATAAACAAGGTGT 58.476 29.630 0.00 0.00 39.45 4.16
750 755 9.141400 GTAACACAAAAATAAACAAGGTGTTCA 57.859 29.630 10.12 0.00 44.17 3.18
751 756 7.589574 ACACAAAAATAAACAAGGTGTTCAC 57.410 32.000 0.00 0.00 40.14 3.18
752 757 6.309251 ACACAAAAATAAACAAGGTGTTCACG 59.691 34.615 0.00 0.00 40.14 4.35
754 759 4.911514 AAATAAACAAGGTGTTCACGCT 57.088 36.364 0.00 0.00 40.14 5.07
755 760 6.380095 AAAATAAACAAGGTGTTCACGCTA 57.620 33.333 0.00 0.00 40.14 4.26
756 761 5.352643 AATAAACAAGGTGTTCACGCTAC 57.647 39.130 0.00 0.00 40.14 3.58
757 762 1.589803 AACAAGGTGTTCACGCTACC 58.410 50.000 0.00 0.00 35.27 3.18
760 765 0.602905 AAGGTGTTCACGCTACCTGC 60.603 55.000 0.00 0.00 43.75 4.85
761 766 1.004918 GGTGTTCACGCTACCTGCT 60.005 57.895 0.00 0.00 40.11 4.24
764 769 0.319555 TGTTCACGCTACCTGCTCAC 60.320 55.000 0.00 0.00 40.11 3.51
765 770 0.319555 GTTCACGCTACCTGCTCACA 60.320 55.000 0.00 0.00 40.11 3.58
766 771 0.391228 TTCACGCTACCTGCTCACAA 59.609 50.000 0.00 0.00 40.11 3.33
767 772 0.038251 TCACGCTACCTGCTCACAAG 60.038 55.000 0.00 0.00 40.11 3.16
768 773 0.319900 CACGCTACCTGCTCACAAGT 60.320 55.000 0.00 0.00 40.11 3.16
769 774 0.038159 ACGCTACCTGCTCACAAGTC 60.038 55.000 0.00 0.00 40.11 3.01
770 775 1.073216 CGCTACCTGCTCACAAGTCG 61.073 60.000 0.00 0.00 40.11 4.18
771 776 0.737715 GCTACCTGCTCACAAGTCGG 60.738 60.000 0.00 0.00 38.95 4.79
772 777 0.603569 CTACCTGCTCACAAGTCGGT 59.396 55.000 0.00 0.00 0.00 4.69
773 778 0.601558 TACCTGCTCACAAGTCGGTC 59.398 55.000 0.00 0.00 0.00 4.79
774 779 1.367471 CCTGCTCACAAGTCGGTCA 59.633 57.895 0.00 0.00 0.00 4.02
775 780 0.668706 CCTGCTCACAAGTCGGTCAG 60.669 60.000 0.00 0.00 0.00 3.51
776 781 0.032678 CTGCTCACAAGTCGGTCAGT 59.967 55.000 0.00 0.00 0.00 3.41
777 782 0.249447 TGCTCACAAGTCGGTCAGTG 60.249 55.000 0.00 0.00 0.00 3.66
781 786 1.202371 TCACAAGTCGGTCAGTGTCAC 60.202 52.381 0.00 0.00 33.84 3.67
803 808 0.244178 TGCATGCGTCCAACGTACTA 59.756 50.000 14.09 0.00 44.73 1.82
805 810 1.521423 GCATGCGTCCAACGTACTATC 59.479 52.381 0.00 0.00 44.73 2.08
806 811 2.124903 CATGCGTCCAACGTACTATCC 58.875 52.381 1.14 0.00 44.73 2.59
808 813 1.402968 TGCGTCCAACGTACTATCCTC 59.597 52.381 1.14 0.00 44.73 3.71
809 814 1.674962 GCGTCCAACGTACTATCCTCT 59.325 52.381 1.14 0.00 44.73 3.69
810 815 2.541178 GCGTCCAACGTACTATCCTCTG 60.541 54.545 1.14 0.00 44.73 3.35
811 816 2.541178 CGTCCAACGTACTATCCTCTGC 60.541 54.545 0.00 0.00 36.74 4.26
812 817 2.426024 GTCCAACGTACTATCCTCTGCA 59.574 50.000 0.00 0.00 0.00 4.41
815 820 3.181475 CCAACGTACTATCCTCTGCATGT 60.181 47.826 0.00 0.00 0.00 3.21
817 822 5.451381 CCAACGTACTATCCTCTGCATGTAA 60.451 44.000 0.00 0.00 0.00 2.41
818 823 6.216569 CAACGTACTATCCTCTGCATGTAAT 58.783 40.000 0.00 0.00 0.00 1.89
821 826 6.040504 ACGTACTATCCTCTGCATGTAATTGA 59.959 38.462 0.00 0.00 0.00 2.57
822 827 6.923508 CGTACTATCCTCTGCATGTAATTGAA 59.076 38.462 0.00 0.00 0.00 2.69
823 828 7.115520 CGTACTATCCTCTGCATGTAATTGAAG 59.884 40.741 0.00 0.00 0.00 3.02
824 829 7.129457 ACTATCCTCTGCATGTAATTGAAGA 57.871 36.000 0.00 0.00 30.34 2.87
825 830 7.743749 ACTATCCTCTGCATGTAATTGAAGAT 58.256 34.615 0.00 0.00 30.73 2.40
826 831 7.877097 ACTATCCTCTGCATGTAATTGAAGATC 59.123 37.037 0.00 0.00 30.73 2.75
835 840 7.823799 TGCATGTAATTGAAGATCACAAGAGTA 59.176 33.333 10.23 2.39 0.00 2.59
843 848 5.652891 TGAAGATCACAAGAGTACTACTCCC 59.347 44.000 11.94 0.00 46.18 4.30
847 852 4.476297 TCACAAGAGTACTACTCCCAACA 58.524 43.478 11.94 0.00 46.18 3.33
859 864 1.880027 CTCCCAACAAAAGAGGTTCCG 59.120 52.381 0.00 0.00 0.00 4.30
860 865 1.491332 TCCCAACAAAAGAGGTTCCGA 59.509 47.619 0.00 0.00 0.00 4.55
861 866 2.092321 TCCCAACAAAAGAGGTTCCGAA 60.092 45.455 0.00 0.00 0.00 4.30
862 867 2.691011 CCCAACAAAAGAGGTTCCGAAA 59.309 45.455 0.00 0.00 0.00 3.46
863 868 3.243401 CCCAACAAAAGAGGTTCCGAAAG 60.243 47.826 0.00 0.00 0.00 2.62
865 870 4.097286 CCAACAAAAGAGGTTCCGAAAGAA 59.903 41.667 0.00 0.00 0.00 2.52
868 873 5.891451 ACAAAAGAGGTTCCGAAAGAAAAG 58.109 37.500 0.00 0.00 35.85 2.27
872 877 4.974399 AGAGGTTCCGAAAGAAAAGATGT 58.026 39.130 0.00 0.00 35.85 3.06
873 878 4.757149 AGAGGTTCCGAAAGAAAAGATGTG 59.243 41.667 0.00 0.00 35.85 3.21
874 879 4.714632 AGGTTCCGAAAGAAAAGATGTGA 58.285 39.130 0.00 0.00 35.85 3.58
875 880 4.757149 AGGTTCCGAAAGAAAAGATGTGAG 59.243 41.667 0.00 0.00 35.85 3.51
876 881 4.515567 GGTTCCGAAAGAAAAGATGTGAGT 59.484 41.667 0.00 0.00 35.85 3.41
877 882 5.699458 GGTTCCGAAAGAAAAGATGTGAGTA 59.301 40.000 0.00 0.00 35.85 2.59
878 883 6.371825 GGTTCCGAAAGAAAAGATGTGAGTAT 59.628 38.462 0.00 0.00 35.85 2.12
879 884 7.413109 GGTTCCGAAAGAAAAGATGTGAGTATC 60.413 40.741 0.00 0.00 35.85 2.24
880 885 6.936279 TCCGAAAGAAAAGATGTGAGTATCT 58.064 36.000 0.00 0.00 39.03 1.98
881 886 7.036220 TCCGAAAGAAAAGATGTGAGTATCTC 58.964 38.462 0.00 0.00 36.42 2.75
882 887 6.256757 CCGAAAGAAAAGATGTGAGTATCTCC 59.743 42.308 0.00 0.00 36.42 3.71
883 888 7.038659 CGAAAGAAAAGATGTGAGTATCTCCT 58.961 38.462 0.00 0.00 36.42 3.69
884 889 8.191446 CGAAAGAAAAGATGTGAGTATCTCCTA 58.809 37.037 0.00 0.00 36.42 2.94
910 915 6.420913 AGTATACTGATAAATCGCCAAGGT 57.579 37.500 4.10 0.00 0.00 3.50
920 925 9.653287 TGATAAATCGCCAAGGTCTATATAAAG 57.347 33.333 0.00 0.00 0.00 1.85
921 926 9.654663 GATAAATCGCCAAGGTCTATATAAAGT 57.345 33.333 0.00 0.00 0.00 2.66
954 6319 1.559682 GGAGCTTGATTACTCCCACCA 59.440 52.381 0.00 0.00 45.71 4.17
961 6326 4.487714 TGATTACTCCCACCAATCTCAC 57.512 45.455 0.00 0.00 31.37 3.51
962 6327 3.199946 TGATTACTCCCACCAATCTCACC 59.800 47.826 0.00 0.00 31.37 4.02
963 6328 2.642171 TACTCCCACCAATCTCACCT 57.358 50.000 0.00 0.00 0.00 4.00
964 6329 1.280457 ACTCCCACCAATCTCACCTC 58.720 55.000 0.00 0.00 0.00 3.85
965 6330 1.203364 ACTCCCACCAATCTCACCTCT 60.203 52.381 0.00 0.00 0.00 3.69
966 6331 1.484240 CTCCCACCAATCTCACCTCTC 59.516 57.143 0.00 0.00 0.00 3.20
967 6332 1.203300 TCCCACCAATCTCACCTCTCA 60.203 52.381 0.00 0.00 0.00 3.27
977 6342 4.732672 TCTCACCTCTCATCATCACAAG 57.267 45.455 0.00 0.00 0.00 3.16
978 6343 4.092279 TCTCACCTCTCATCATCACAAGT 58.908 43.478 0.00 0.00 0.00 3.16
979 6344 4.081807 TCTCACCTCTCATCATCACAAGTG 60.082 45.833 0.00 0.00 0.00 3.16
994 6359 0.534412 AAGTGGTCTCTGCATCGAGG 59.466 55.000 3.36 0.00 0.00 4.63
1178 6864 4.189188 CCCGTTCGACGAGGCGAT 62.189 66.667 20.27 0.00 46.05 4.58
1247 6933 1.002134 CTTCCGACAAGCCCCATGT 60.002 57.895 0.00 0.00 0.00 3.21
1260 6946 4.147449 CATGTCCGCCAGAGCCGA 62.147 66.667 0.00 0.00 34.57 5.54
1263 6949 4.373116 GTCCGCCAGAGCCGAACA 62.373 66.667 0.00 0.00 34.57 3.18
1272 6958 1.001378 CAGAGCCGAACAAAACCAAGG 60.001 52.381 0.00 0.00 0.00 3.61
1307 6994 7.765819 CAGGATGACAGTAAGTTAATCATCACA 59.234 37.037 22.36 5.33 44.89 3.58
1343 7052 6.607019 ACGATGTATTGGGGGTGTAATTAAT 58.393 36.000 0.00 0.00 0.00 1.40
1344 7053 7.064229 ACGATGTATTGGGGGTGTAATTAATT 58.936 34.615 5.89 5.89 0.00 1.40
1345 7054 8.219178 ACGATGTATTGGGGGTGTAATTAATTA 58.781 33.333 3.71 3.71 0.00 1.40
1371 7100 7.316640 TGAGTTACTGATCTTCTTCTACTTGC 58.683 38.462 0.00 0.00 0.00 4.01
1372 7101 7.039714 TGAGTTACTGATCTTCTTCTACTTGCA 60.040 37.037 0.00 0.00 0.00 4.08
1519 7248 1.354155 CGTCTACGATGGTGCGCTA 59.646 57.895 9.73 0.00 43.02 4.26
1540 7269 2.124193 TACTACGCCCGGCAGCTA 60.124 61.111 10.77 0.00 0.00 3.32
1550 7279 3.604629 GGCAGCTAGTCGAGGACA 58.395 61.111 0.00 0.00 34.60 4.02
1551 7280 1.890894 GGCAGCTAGTCGAGGACAA 59.109 57.895 0.00 0.00 34.60 3.18
1559 7288 5.470437 CAGCTAGTCGAGGACAACATCTATA 59.530 44.000 0.00 0.00 34.60 1.31
1564 7293 5.067936 AGTCGAGGACAACATCTATAACAGG 59.932 44.000 0.00 0.00 34.60 4.00
1790 7522 8.492748 ACTTGTGTTATTACGTGTATGTTTGAG 58.507 33.333 0.00 0.00 0.00 3.02
1797 7529 3.399330 ACGTGTATGTTTGAGGGAGTTG 58.601 45.455 0.00 0.00 0.00 3.16
1811 7543 7.305813 TGAGGGAGTTGTTATGTTTGTACTA 57.694 36.000 0.00 0.00 0.00 1.82
1814 7546 6.043474 AGGGAGTTGTTATGTTTGTACTACCA 59.957 38.462 0.00 0.00 38.77 3.25
1817 7549 5.178067 AGTTGTTATGTTTGTACTACCACGC 59.822 40.000 0.00 0.00 0.00 5.34
1818 7550 3.995705 TGTTATGTTTGTACTACCACGCC 59.004 43.478 0.00 0.00 0.00 5.68
1819 7551 1.717194 ATGTTTGTACTACCACGCCG 58.283 50.000 0.00 0.00 0.00 6.46
1820 7552 0.945265 TGTTTGTACTACCACGCCGC 60.945 55.000 0.00 0.00 0.00 6.53
1821 7553 0.945265 GTTTGTACTACCACGCCGCA 60.945 55.000 0.00 0.00 0.00 5.69
1822 7554 0.668096 TTTGTACTACCACGCCGCAG 60.668 55.000 0.00 0.00 0.00 5.18
1835 7567 2.591429 CGCAGGTGTGGTGAGCAA 60.591 61.111 0.00 0.00 0.00 3.91
1836 7568 1.968017 CGCAGGTGTGGTGAGCAAT 60.968 57.895 0.00 0.00 0.00 3.56
1837 7569 1.878775 GCAGGTGTGGTGAGCAATC 59.121 57.895 0.00 0.00 0.00 2.67
1838 7570 0.607489 GCAGGTGTGGTGAGCAATCT 60.607 55.000 0.00 0.00 0.00 2.40
1839 7571 1.901591 CAGGTGTGGTGAGCAATCTT 58.098 50.000 0.00 0.00 0.00 2.40
1840 7572 1.808945 CAGGTGTGGTGAGCAATCTTC 59.191 52.381 0.00 0.00 0.00 2.87
1841 7573 1.421268 AGGTGTGGTGAGCAATCTTCA 59.579 47.619 0.00 0.00 0.00 3.02
1842 7574 2.158623 AGGTGTGGTGAGCAATCTTCAA 60.159 45.455 0.00 0.00 0.00 2.69
1843 7575 2.622942 GGTGTGGTGAGCAATCTTCAAA 59.377 45.455 0.00 0.00 0.00 2.69
1844 7576 3.256631 GGTGTGGTGAGCAATCTTCAAAT 59.743 43.478 0.00 0.00 0.00 2.32
1845 7577 4.479619 GTGTGGTGAGCAATCTTCAAATC 58.520 43.478 0.00 0.00 0.00 2.17
1846 7578 4.022935 GTGTGGTGAGCAATCTTCAAATCA 60.023 41.667 0.00 0.00 0.00 2.57
1847 7579 4.768448 TGTGGTGAGCAATCTTCAAATCAT 59.232 37.500 0.00 0.00 0.00 2.45
1848 7580 5.244402 TGTGGTGAGCAATCTTCAAATCATT 59.756 36.000 0.00 0.00 0.00 2.57
1849 7581 5.803967 GTGGTGAGCAATCTTCAAATCATTC 59.196 40.000 0.00 0.00 0.00 2.67
1850 7582 5.032863 GGTGAGCAATCTTCAAATCATTCG 58.967 41.667 0.00 0.00 0.00 3.34
1851 7583 5.163723 GGTGAGCAATCTTCAAATCATTCGA 60.164 40.000 0.00 0.00 0.00 3.71
1852 7584 6.317088 GTGAGCAATCTTCAAATCATTCGAA 58.683 36.000 0.00 0.00 0.00 3.71
1853 7585 6.250104 GTGAGCAATCTTCAAATCATTCGAAC 59.750 38.462 0.00 0.00 0.00 3.95
1854 7586 6.149973 TGAGCAATCTTCAAATCATTCGAACT 59.850 34.615 0.00 0.00 0.00 3.01
1855 7587 7.334171 TGAGCAATCTTCAAATCATTCGAACTA 59.666 33.333 0.00 0.00 0.00 2.24
1856 7588 8.218338 AGCAATCTTCAAATCATTCGAACTAT 57.782 30.769 0.00 0.00 0.00 2.12
1857 7589 8.127327 AGCAATCTTCAAATCATTCGAACTATG 58.873 33.333 0.00 0.00 0.00 2.23
1858 7590 7.912250 GCAATCTTCAAATCATTCGAACTATGT 59.088 33.333 0.00 0.00 0.00 2.29
1859 7591 9.778993 CAATCTTCAAATCATTCGAACTATGTT 57.221 29.630 0.00 0.00 0.00 2.71
1893 7625 5.305902 TGAAGTGAAGTACATTGTAGGTCCA 59.694 40.000 0.00 0.00 0.00 4.02
1934 7666 5.104941 TGTCATGTAGGTCCTCAAACTATGG 60.105 44.000 0.00 0.00 0.00 2.74
1942 7674 5.131142 AGGTCCTCAAACTATGGAAATCGAT 59.869 40.000 0.00 0.00 0.00 3.59
1954 7686 5.567037 TGGAAATCGATATCCAGGTTCAT 57.433 39.130 0.00 0.00 40.74 2.57
1960 7692 6.918067 ATCGATATCCAGGTTCATGAAGTA 57.082 37.500 8.80 0.00 0.00 2.24
1972 7704 5.107065 GGTTCATGAAGTACAGTAAGTGTGC 60.107 44.000 8.80 0.00 40.69 4.57
1993 7725 3.367703 GCCATTCAGACCCAAAATCTGTG 60.368 47.826 2.18 0.00 43.47 3.66
1994 7726 3.828451 CCATTCAGACCCAAAATCTGTGT 59.172 43.478 2.18 0.00 43.47 3.72
1997 7729 3.743521 TCAGACCCAAAATCTGTGTGAG 58.256 45.455 2.18 0.00 43.47 3.51
1999 7731 2.107204 AGACCCAAAATCTGTGTGAGCT 59.893 45.455 0.00 0.00 0.00 4.09
2002 7734 2.227388 CCCAAAATCTGTGTGAGCTCAC 59.773 50.000 35.04 35.04 46.59 3.51
2007 7739 1.637338 TCTGTGTGAGCTCACCTGAT 58.363 50.000 37.23 0.00 45.88 2.90
2017 7749 1.381191 TCACCTGATCGGCCAGCTA 60.381 57.895 2.24 0.00 35.61 3.32
2019 7751 1.381872 ACCTGATCGGCCAGCTAGT 60.382 57.895 2.24 0.00 35.61 2.57
2021 7753 1.680522 CCTGATCGGCCAGCTAGTGT 61.681 60.000 2.24 0.00 32.97 3.55
2023 7755 1.299468 GATCGGCCAGCTAGTGTCG 60.299 63.158 2.24 0.00 0.00 4.35
2064 7800 2.044451 CCCCGCAATGTAAGGCCA 60.044 61.111 5.01 0.00 0.00 5.36
2091 7827 8.745837 GTGACGGAAATATGCAAATAAATTCAG 58.254 33.333 0.00 0.00 0.00 3.02
2103 7840 9.153721 TGCAAATAAATTCAGATTCATGGTTTC 57.846 29.630 0.00 0.00 0.00 2.78
2104 7841 8.606602 GCAAATAAATTCAGATTCATGGTTTCC 58.393 33.333 0.00 0.00 0.00 3.13
2115 7852 7.441760 CAGATTCATGGTTTCCAAAAATGTTCA 59.558 33.333 0.00 0.00 36.95 3.18
2116 7853 8.158789 AGATTCATGGTTTCCAAAAATGTTCAT 58.841 29.630 0.00 0.00 36.95 2.57
2117 7854 7.493743 TTCATGGTTTCCAAAAATGTTCATG 57.506 32.000 0.00 0.00 36.95 3.07
2129 7866 9.398538 CCAAAAATGTTCATGGATATGGAAAAT 57.601 29.630 0.00 0.00 34.82 1.82
2136 7873 8.760735 TGTTCATGGATATGGAAAATTGTTCAT 58.239 29.630 0.00 0.00 34.97 2.57
2197 7934 5.570973 TCACAAATATGGAAAAATGTTCGCG 59.429 36.000 0.00 0.00 0.00 5.87
2204 7941 4.778904 TGGAAAAATGTTCGCGACTTTAG 58.221 39.130 9.15 0.00 0.00 1.85
2213 7950 6.528014 TGTTCGCGACTTTAGAAAAATGTA 57.472 33.333 9.15 0.00 0.00 2.29
2214 7951 7.124347 TGTTCGCGACTTTAGAAAAATGTAT 57.876 32.000 9.15 0.00 0.00 2.29
2218 7955 4.728608 GCGACTTTAGAAAAATGTATGCGG 59.271 41.667 0.00 0.00 0.00 5.69
2220 7957 5.957796 CGACTTTAGAAAAATGTATGCGGAC 59.042 40.000 0.00 0.00 0.00 4.79
2233 7970 4.393371 TGTATGCGGACGATGAATTTGAAA 59.607 37.500 0.00 0.00 0.00 2.69
2260 7997 1.872388 TCGCGAACAATGAACTTGGA 58.128 45.000 6.20 0.00 39.30 3.53
2266 8003 5.051106 CGCGAACAATGAACTTGGAAAAATT 60.051 36.000 0.00 0.00 39.30 1.82
2267 8004 6.143118 CGCGAACAATGAACTTGGAAAAATTA 59.857 34.615 0.00 0.00 39.30 1.40
2268 8005 7.280769 GCGAACAATGAACTTGGAAAAATTAC 58.719 34.615 0.00 0.00 39.30 1.89
2269 8006 7.169140 GCGAACAATGAACTTGGAAAAATTACT 59.831 33.333 0.00 0.00 39.30 2.24
2270 8007 8.690840 CGAACAATGAACTTGGAAAAATTACTC 58.309 33.333 0.00 0.00 39.30 2.59
2271 8008 8.574196 AACAATGAACTTGGAAAAATTACTCG 57.426 30.769 0.00 0.00 39.30 4.18
2272 8009 6.640907 ACAATGAACTTGGAAAAATTACTCGC 59.359 34.615 0.00 0.00 39.30 5.03
2273 8010 5.759506 TGAACTTGGAAAAATTACTCGCA 57.240 34.783 0.00 0.00 0.00 5.10
2274 8011 6.137794 TGAACTTGGAAAAATTACTCGCAA 57.862 33.333 0.00 0.00 0.00 4.85
2275 8012 5.974751 TGAACTTGGAAAAATTACTCGCAAC 59.025 36.000 0.00 0.00 0.00 4.17
2276 8013 4.866921 ACTTGGAAAAATTACTCGCAACC 58.133 39.130 0.00 0.00 0.00 3.77
2277 8014 4.583073 ACTTGGAAAAATTACTCGCAACCT 59.417 37.500 0.00 0.00 0.00 3.50
2278 8015 5.068591 ACTTGGAAAAATTACTCGCAACCTT 59.931 36.000 0.00 0.00 0.00 3.50
2279 8016 6.263617 ACTTGGAAAAATTACTCGCAACCTTA 59.736 34.615 0.00 0.00 0.00 2.69
2280 8017 6.636562 TGGAAAAATTACTCGCAACCTTAA 57.363 33.333 0.00 0.00 0.00 1.85
2281 8018 6.674066 TGGAAAAATTACTCGCAACCTTAAG 58.326 36.000 0.00 0.00 0.00 1.85
2282 8019 6.487331 TGGAAAAATTACTCGCAACCTTAAGA 59.513 34.615 3.36 0.00 0.00 2.10
2283 8020 7.013464 TGGAAAAATTACTCGCAACCTTAAGAA 59.987 33.333 3.36 0.00 0.00 2.52
2284 8021 7.863877 GGAAAAATTACTCGCAACCTTAAGAAA 59.136 33.333 3.36 0.00 0.00 2.52
2285 8022 9.240159 GAAAAATTACTCGCAACCTTAAGAAAA 57.760 29.630 3.36 0.00 0.00 2.29
2286 8023 9.758651 AAAAATTACTCGCAACCTTAAGAAAAT 57.241 25.926 3.36 0.00 0.00 1.82
2287 8024 8.742554 AAATTACTCGCAACCTTAAGAAAATG 57.257 30.769 3.36 0.00 0.00 2.32
2288 8025 6.870971 TTACTCGCAACCTTAAGAAAATGT 57.129 33.333 3.36 0.00 0.00 2.71
2289 8026 5.767816 ACTCGCAACCTTAAGAAAATGTT 57.232 34.783 3.36 0.00 0.00 2.71
2290 8027 6.144078 ACTCGCAACCTTAAGAAAATGTTT 57.856 33.333 3.36 0.00 0.00 2.83
2291 8028 5.977129 ACTCGCAACCTTAAGAAAATGTTTG 59.023 36.000 3.36 0.00 0.00 2.93
2292 8029 4.742659 TCGCAACCTTAAGAAAATGTTTGC 59.257 37.500 3.36 6.13 0.00 3.68
2293 8030 4.505922 CGCAACCTTAAGAAAATGTTTGCA 59.494 37.500 3.36 0.00 0.00 4.08
2294 8031 5.006165 CGCAACCTTAAGAAAATGTTTGCAA 59.994 36.000 3.36 0.00 0.00 4.08
2295 8032 6.456181 CGCAACCTTAAGAAAATGTTTGCAAA 60.456 34.615 8.05 8.05 0.00 3.68
2296 8033 7.416817 GCAACCTTAAGAAAATGTTTGCAAAT 58.583 30.769 16.21 0.00 0.00 2.32
2297 8034 7.376601 GCAACCTTAAGAAAATGTTTGCAAATG 59.623 33.333 16.21 4.62 0.00 2.32
2298 8035 8.610896 CAACCTTAAGAAAATGTTTGCAAATGA 58.389 29.630 16.21 5.72 0.00 2.57
2299 8036 8.907222 ACCTTAAGAAAATGTTTGCAAATGAT 57.093 26.923 16.21 7.94 0.00 2.45
2300 8037 9.995003 ACCTTAAGAAAATGTTTGCAAATGATA 57.005 25.926 16.21 3.13 0.00 2.15
2376 8113 8.785602 GTTCACGAACAACAAAAATAAGTTTG 57.214 30.769 5.05 0.00 40.87 2.93
2398 8135 9.983431 GTTTGTGACTTTAATAAAATTGTACGC 57.017 29.630 0.00 0.00 0.00 4.42
2402 8139 9.269415 GTGACTTTAATAAAATTGTACGCGAAT 57.731 29.630 15.93 0.00 0.00 3.34
2437 8174 5.806089 AAAAGTTCGCGAACAATGAATTC 57.194 34.783 42.89 20.80 43.47 2.17
2558 8295 7.402640 TGTTCACAAACAACAACAAAAAGTTC 58.597 30.769 0.00 0.00 42.34 3.01
2559 8296 6.204075 TCACAAACAACAACAAAAAGTTCG 57.796 33.333 0.00 0.00 38.74 3.95
2560 8297 4.838111 CACAAACAACAACAAAAAGTTCGC 59.162 37.500 0.00 0.00 38.74 4.70
2561 8298 3.963340 AACAACAACAAAAAGTTCGCG 57.037 38.095 0.00 0.00 38.74 5.87
2562 8299 3.204597 ACAACAACAAAAAGTTCGCGA 57.795 38.095 3.71 3.71 38.74 5.87
2563 8300 3.566523 ACAACAACAAAAAGTTCGCGAA 58.433 36.364 19.38 19.38 38.74 4.70
2564 8301 4.170256 ACAACAACAAAAAGTTCGCGAAT 58.830 34.783 26.23 7.03 38.74 3.34
2565 8302 5.333513 ACAACAACAAAAAGTTCGCGAATA 58.666 33.333 26.23 0.00 38.74 1.75
2566 8303 5.974751 ACAACAACAAAAAGTTCGCGAATAT 59.025 32.000 26.23 14.23 38.74 1.28
2567 8304 6.075099 ACAACAACAAAAAGTTCGCGAATATG 60.075 34.615 26.23 19.66 38.74 1.78
2568 8305 5.753744 ACAACAAAAAGTTCGCGAATATGA 58.246 33.333 26.23 0.00 38.74 2.15
2569 8306 6.202937 ACAACAAAAAGTTCGCGAATATGAA 58.797 32.000 26.23 0.00 38.74 2.57
2570 8307 6.693545 ACAACAAAAAGTTCGCGAATATGAAA 59.306 30.769 26.23 0.00 38.74 2.69
2571 8308 7.381139 ACAACAAAAAGTTCGCGAATATGAAAT 59.619 29.630 26.23 6.52 38.74 2.17
2572 8309 8.845648 CAACAAAAAGTTCGCGAATATGAAATA 58.154 29.630 26.23 0.00 38.74 1.40
2573 8310 8.958175 ACAAAAAGTTCGCGAATATGAAATAA 57.042 26.923 26.23 0.00 29.06 1.40
2574 8311 9.400638 ACAAAAAGTTCGCGAATATGAAATAAA 57.599 25.926 26.23 0.00 29.06 1.40
2577 8314 9.567848 AAAAGTTCGCGAATATGAAATAAATGT 57.432 25.926 26.23 0.00 29.06 2.71
2578 8315 9.567848 AAAGTTCGCGAATATGAAATAAATGTT 57.432 25.926 26.23 1.65 29.06 2.71
2579 8316 8.767944 AGTTCGCGAATATGAAATAAATGTTC 57.232 30.769 26.23 5.43 29.06 3.18
2580 8317 8.394877 AGTTCGCGAATATGAAATAAATGTTCA 58.605 29.630 26.23 0.00 39.24 3.18
2581 8318 8.461398 GTTCGCGAATATGAAATAAATGTTCAC 58.539 33.333 26.23 1.27 37.80 3.18
2582 8319 7.689299 TCGCGAATATGAAATAAATGTTCACA 58.311 30.769 6.20 0.00 37.80 3.58
2583 8320 8.178313 TCGCGAATATGAAATAAATGTTCACAA 58.822 29.630 6.20 0.00 37.80 3.33
2584 8321 8.252454 CGCGAATATGAAATAAATGTTCACAAC 58.748 33.333 0.00 0.00 37.80 3.32
2585 8322 9.289303 GCGAATATGAAATAAATGTTCACAACT 57.711 29.630 0.00 0.00 37.80 3.16
2600 8337 9.744468 ATGTTCACAACTTTAAAAGGTATTCAC 57.256 29.630 0.00 0.00 0.00 3.18
2601 8338 8.740906 TGTTCACAACTTTAAAAGGTATTCACA 58.259 29.630 0.00 0.00 0.00 3.58
2602 8339 9.016623 GTTCACAACTTTAAAAGGTATTCACAC 57.983 33.333 0.00 0.00 0.00 3.82
2603 8340 8.282455 TCACAACTTTAAAAGGTATTCACACA 57.718 30.769 0.00 0.00 0.00 3.72
2604 8341 8.185505 TCACAACTTTAAAAGGTATTCACACAC 58.814 33.333 0.00 0.00 0.00 3.82
2605 8342 7.971168 CACAACTTTAAAAGGTATTCACACACA 59.029 33.333 0.00 0.00 0.00 3.72
2606 8343 8.524487 ACAACTTTAAAAGGTATTCACACACAA 58.476 29.630 0.00 0.00 0.00 3.33
2607 8344 9.528018 CAACTTTAAAAGGTATTCACACACAAT 57.472 29.630 0.00 0.00 0.00 2.71
2614 8351 9.528018 AAAAGGTATTCACACACAATAAGTTTG 57.472 29.630 0.00 0.00 34.10 2.93
2615 8352 8.458573 AAGGTATTCACACACAATAAGTTTGA 57.541 30.769 0.00 0.00 32.28 2.69
2616 8353 8.099364 AGGTATTCACACACAATAAGTTTGAG 57.901 34.615 0.00 0.00 32.28 3.02
2617 8354 7.936847 AGGTATTCACACACAATAAGTTTGAGA 59.063 33.333 0.00 0.00 32.28 3.27
2618 8355 8.015658 GGTATTCACACACAATAAGTTTGAGAC 58.984 37.037 0.00 0.00 29.25 3.36
2619 8356 6.371809 TTCACACACAATAAGTTTGAGACC 57.628 37.500 0.00 0.00 29.25 3.85
2620 8357 5.680619 TCACACACAATAAGTTTGAGACCT 58.319 37.500 0.00 0.00 32.28 3.85
2621 8358 6.822442 TCACACACAATAAGTTTGAGACCTA 58.178 36.000 0.00 0.00 32.28 3.08
2622 8359 6.704493 TCACACACAATAAGTTTGAGACCTAC 59.296 38.462 0.00 0.00 32.28 3.18
2623 8360 6.481976 CACACACAATAAGTTTGAGACCTACA 59.518 38.462 0.00 0.00 32.28 2.74
2624 8361 7.173218 CACACACAATAAGTTTGAGACCTACAT 59.827 37.037 0.00 0.00 32.28 2.29
2625 8362 7.173218 ACACACAATAAGTTTGAGACCTACATG 59.827 37.037 0.00 0.00 32.28 3.21
2626 8363 7.387673 CACACAATAAGTTTGAGACCTACATGA 59.612 37.037 0.00 0.00 29.21 3.07
2627 8364 7.387948 ACACAATAAGTTTGAGACCTACATGAC 59.612 37.037 0.00 0.00 0.00 3.06
2628 8365 7.387673 CACAATAAGTTTGAGACCTACATGACA 59.612 37.037 0.00 0.00 0.00 3.58
2629 8366 7.387948 ACAATAAGTTTGAGACCTACATGACAC 59.612 37.037 0.00 0.00 0.00 3.67
2630 8367 4.273148 AGTTTGAGACCTACATGACACC 57.727 45.455 0.00 0.00 0.00 4.16
2631 8368 3.904339 AGTTTGAGACCTACATGACACCT 59.096 43.478 0.00 0.00 0.00 4.00
2632 8369 4.348168 AGTTTGAGACCTACATGACACCTT 59.652 41.667 0.00 0.00 0.00 3.50
2633 8370 4.974645 TTGAGACCTACATGACACCTTT 57.025 40.909 0.00 0.00 0.00 3.11
2634 8371 4.271696 TGAGACCTACATGACACCTTTG 57.728 45.455 0.00 0.00 0.00 2.77
2635 8372 3.901222 TGAGACCTACATGACACCTTTGA 59.099 43.478 0.00 0.00 0.00 2.69
2636 8373 4.346709 TGAGACCTACATGACACCTTTGAA 59.653 41.667 0.00 0.00 0.00 2.69
2637 8374 5.163248 TGAGACCTACATGACACCTTTGAAA 60.163 40.000 0.00 0.00 0.00 2.69
2638 8375 5.880901 AGACCTACATGACACCTTTGAAAT 58.119 37.500 0.00 0.00 0.00 2.17
2639 8376 5.707298 AGACCTACATGACACCTTTGAAATG 59.293 40.000 0.00 0.00 0.00 2.32
2640 8377 4.766891 ACCTACATGACACCTTTGAAATGG 59.233 41.667 0.00 0.00 0.00 3.16
2641 8378 4.766891 CCTACATGACACCTTTGAAATGGT 59.233 41.667 0.00 0.00 36.95 3.55
2642 8379 5.243730 CCTACATGACACCTTTGAAATGGTT 59.756 40.000 0.00 0.00 34.54 3.67
2643 8380 5.612725 ACATGACACCTTTGAAATGGTTT 57.387 34.783 0.00 0.00 34.54 3.27
2644 8381 6.723298 ACATGACACCTTTGAAATGGTTTA 57.277 33.333 0.00 0.00 34.54 2.01
2645 8382 6.748132 ACATGACACCTTTGAAATGGTTTAG 58.252 36.000 0.00 0.00 34.54 1.85
2646 8383 5.782893 TGACACCTTTGAAATGGTTTAGG 57.217 39.130 0.00 0.00 34.54 2.69
2647 8384 5.450453 TGACACCTTTGAAATGGTTTAGGA 58.550 37.500 0.00 0.00 34.54 2.94
2648 8385 5.894393 TGACACCTTTGAAATGGTTTAGGAA 59.106 36.000 0.00 0.00 34.54 3.36
2649 8386 6.156748 ACACCTTTGAAATGGTTTAGGAAC 57.843 37.500 0.00 0.00 34.54 3.62
2661 8398 4.584327 GTTTAGGAACCAACAATGCACT 57.416 40.909 0.00 0.00 0.00 4.40
2662 8399 4.944048 GTTTAGGAACCAACAATGCACTT 58.056 39.130 0.00 0.00 0.00 3.16
2663 8400 4.846779 TTAGGAACCAACAATGCACTTC 57.153 40.909 0.00 0.00 0.00 3.01
2664 8401 2.665165 AGGAACCAACAATGCACTTCA 58.335 42.857 0.00 0.00 0.00 3.02
2665 8402 2.362077 AGGAACCAACAATGCACTTCAC 59.638 45.455 0.00 0.00 0.00 3.18
2666 8403 2.362077 GGAACCAACAATGCACTTCACT 59.638 45.455 0.00 0.00 0.00 3.41
2667 8404 3.550842 GGAACCAACAATGCACTTCACTC 60.551 47.826 0.00 0.00 0.00 3.51
2668 8405 2.936202 ACCAACAATGCACTTCACTCT 58.064 42.857 0.00 0.00 0.00 3.24
2669 8406 3.290710 ACCAACAATGCACTTCACTCTT 58.709 40.909 0.00 0.00 0.00 2.85
2670 8407 3.701040 ACCAACAATGCACTTCACTCTTT 59.299 39.130 0.00 0.00 0.00 2.52
2671 8408 4.046462 CCAACAATGCACTTCACTCTTTG 58.954 43.478 0.00 0.00 0.00 2.77
2672 8409 4.440525 CCAACAATGCACTTCACTCTTTGT 60.441 41.667 0.00 0.00 32.00 2.83
2673 8410 4.989279 ACAATGCACTTCACTCTTTGTT 57.011 36.364 0.00 0.00 0.00 2.83
2674 8411 6.264832 CAACAATGCACTTCACTCTTTGTTA 58.735 36.000 8.48 0.00 36.55 2.41
2675 8412 6.639632 ACAATGCACTTCACTCTTTGTTAT 57.360 33.333 0.00 0.00 0.00 1.89
2676 8413 6.441274 ACAATGCACTTCACTCTTTGTTATG 58.559 36.000 0.00 0.00 0.00 1.90
2677 8414 6.262944 ACAATGCACTTCACTCTTTGTTATGA 59.737 34.615 0.00 0.00 0.00 2.15
2678 8415 5.929697 TGCACTTCACTCTTTGTTATGAG 57.070 39.130 0.00 0.00 36.47 2.90
2679 8416 5.610398 TGCACTTCACTCTTTGTTATGAGA 58.390 37.500 0.00 0.00 34.65 3.27
2680 8417 6.233434 TGCACTTCACTCTTTGTTATGAGAT 58.767 36.000 0.00 0.00 34.65 2.75
2681 8418 6.369890 TGCACTTCACTCTTTGTTATGAGATC 59.630 38.462 0.00 0.00 34.65 2.75
2682 8419 6.183360 GCACTTCACTCTTTGTTATGAGATCC 60.183 42.308 0.00 0.00 34.65 3.36
2683 8420 6.875726 CACTTCACTCTTTGTTATGAGATCCA 59.124 38.462 0.00 0.00 34.65 3.41
2684 8421 7.388776 CACTTCACTCTTTGTTATGAGATCCAA 59.611 37.037 0.00 0.00 34.65 3.53
2685 8422 7.389053 ACTTCACTCTTTGTTATGAGATCCAAC 59.611 37.037 0.00 0.00 34.65 3.77
2686 8423 5.869344 TCACTCTTTGTTATGAGATCCAACG 59.131 40.000 0.00 0.00 34.65 4.10
2687 8424 5.639506 CACTCTTTGTTATGAGATCCAACGT 59.360 40.000 0.00 0.00 34.65 3.99
2688 8425 5.639506 ACTCTTTGTTATGAGATCCAACGTG 59.360 40.000 0.00 0.00 34.65 4.49
2689 8426 5.789521 TCTTTGTTATGAGATCCAACGTGA 58.210 37.500 0.00 0.00 0.00 4.35
2690 8427 6.406370 TCTTTGTTATGAGATCCAACGTGAT 58.594 36.000 0.00 0.00 0.00 3.06
2691 8428 6.535150 TCTTTGTTATGAGATCCAACGTGATC 59.465 38.462 7.61 7.61 41.21 2.92
2707 8444 6.516739 ACGTGATCTATGTTGAAGAGAAGA 57.483 37.500 0.00 0.00 0.00 2.87
2708 8445 6.925211 ACGTGATCTATGTTGAAGAGAAGAA 58.075 36.000 0.00 0.00 0.00 2.52
2709 8446 7.378966 ACGTGATCTATGTTGAAGAGAAGAAA 58.621 34.615 0.00 0.00 0.00 2.52
2710 8447 8.037758 ACGTGATCTATGTTGAAGAGAAGAAAT 58.962 33.333 0.00 0.00 0.00 2.17
2711 8448 8.538856 CGTGATCTATGTTGAAGAGAAGAAATC 58.461 37.037 0.00 0.00 0.00 2.17
2712 8449 9.376075 GTGATCTATGTTGAAGAGAAGAAATCA 57.624 33.333 0.00 0.00 0.00 2.57
2713 8450 9.376075 TGATCTATGTTGAAGAGAAGAAATCAC 57.624 33.333 0.00 0.00 0.00 3.06
2714 8451 7.818493 TCTATGTTGAAGAGAAGAAATCACG 57.182 36.000 0.00 0.00 0.00 4.35
2715 8452 4.732285 TGTTGAAGAGAAGAAATCACGC 57.268 40.909 0.00 0.00 0.00 5.34
2716 8453 3.498397 TGTTGAAGAGAAGAAATCACGCC 59.502 43.478 0.00 0.00 0.00 5.68
2717 8454 3.401033 TGAAGAGAAGAAATCACGCCA 57.599 42.857 0.00 0.00 0.00 5.69
2718 8455 3.067106 TGAAGAGAAGAAATCACGCCAC 58.933 45.455 0.00 0.00 0.00 5.01
2719 8456 2.839486 AGAGAAGAAATCACGCCACA 57.161 45.000 0.00 0.00 0.00 4.17
2720 8457 2.693069 AGAGAAGAAATCACGCCACAG 58.307 47.619 0.00 0.00 0.00 3.66
2721 8458 2.300152 AGAGAAGAAATCACGCCACAGA 59.700 45.455 0.00 0.00 0.00 3.41
2722 8459 2.413453 GAGAAGAAATCACGCCACAGAC 59.587 50.000 0.00 0.00 0.00 3.51
2723 8460 1.464997 GAAGAAATCACGCCACAGACC 59.535 52.381 0.00 0.00 0.00 3.85
2724 8461 0.396435 AGAAATCACGCCACAGACCA 59.604 50.000 0.00 0.00 0.00 4.02
2725 8462 0.798776 GAAATCACGCCACAGACCAG 59.201 55.000 0.00 0.00 0.00 4.00
2726 8463 1.237285 AAATCACGCCACAGACCAGC 61.237 55.000 0.00 0.00 0.00 4.85
2727 8464 2.395988 AATCACGCCACAGACCAGCA 62.396 55.000 0.00 0.00 0.00 4.41
2728 8465 2.189191 ATCACGCCACAGACCAGCAT 62.189 55.000 0.00 0.00 0.00 3.79
2729 8466 2.359107 ACGCCACAGACCAGCATG 60.359 61.111 0.00 0.00 0.00 4.06
2730 8467 2.046988 CGCCACAGACCAGCATGA 60.047 61.111 0.00 0.00 39.69 3.07
2731 8468 1.450848 CGCCACAGACCAGCATGAT 60.451 57.895 0.00 0.00 39.69 2.45
2732 8469 1.434622 CGCCACAGACCAGCATGATC 61.435 60.000 0.00 0.00 39.69 2.92
2733 8470 1.099879 GCCACAGACCAGCATGATCC 61.100 60.000 0.00 0.00 39.69 3.36
2734 8471 0.545171 CCACAGACCAGCATGATCCT 59.455 55.000 0.00 0.00 39.69 3.24
2735 8472 1.064906 CCACAGACCAGCATGATCCTT 60.065 52.381 0.00 0.00 39.69 3.36
2736 8473 2.619849 CCACAGACCAGCATGATCCTTT 60.620 50.000 0.00 0.00 39.69 3.11
2737 8474 3.087031 CACAGACCAGCATGATCCTTTT 58.913 45.455 0.00 0.00 39.69 2.27
2738 8475 3.128242 CACAGACCAGCATGATCCTTTTC 59.872 47.826 0.00 0.00 39.69 2.29
2739 8476 3.009916 ACAGACCAGCATGATCCTTTTCT 59.990 43.478 0.00 0.00 39.69 2.52
2740 8477 4.015084 CAGACCAGCATGATCCTTTTCTT 58.985 43.478 0.00 0.00 39.69 2.52
2741 8478 4.096081 CAGACCAGCATGATCCTTTTCTTC 59.904 45.833 0.00 0.00 39.69 2.87
2742 8479 4.012374 GACCAGCATGATCCTTTTCTTCA 58.988 43.478 0.00 0.00 39.69 3.02
2743 8480 4.410099 ACCAGCATGATCCTTTTCTTCAA 58.590 39.130 0.00 0.00 39.69 2.69
2744 8481 4.461781 ACCAGCATGATCCTTTTCTTCAAG 59.538 41.667 0.00 0.00 39.69 3.02
2745 8482 4.461781 CCAGCATGATCCTTTTCTTCAAGT 59.538 41.667 0.00 0.00 39.69 3.16
2746 8483 5.392811 CCAGCATGATCCTTTTCTTCAAGTC 60.393 44.000 0.00 0.00 39.69 3.01
2747 8484 4.394300 AGCATGATCCTTTTCTTCAAGTCG 59.606 41.667 0.00 0.00 0.00 4.18
2748 8485 4.154918 GCATGATCCTTTTCTTCAAGTCGT 59.845 41.667 0.00 0.00 0.00 4.34
2749 8486 5.335191 GCATGATCCTTTTCTTCAAGTCGTT 60.335 40.000 0.00 0.00 0.00 3.85
2750 8487 6.672147 CATGATCCTTTTCTTCAAGTCGTTT 58.328 36.000 0.00 0.00 0.00 3.60
2751 8488 7.573096 GCATGATCCTTTTCTTCAAGTCGTTTA 60.573 37.037 0.00 0.00 0.00 2.01
2752 8489 7.795482 TGATCCTTTTCTTCAAGTCGTTTAA 57.205 32.000 0.00 0.00 0.00 1.52
2753 8490 7.861630 TGATCCTTTTCTTCAAGTCGTTTAAG 58.138 34.615 0.00 0.00 0.00 1.85
2754 8491 7.497909 TGATCCTTTTCTTCAAGTCGTTTAAGT 59.502 33.333 0.00 0.00 0.00 2.24
2755 8492 7.242914 TCCTTTTCTTCAAGTCGTTTAAGTC 57.757 36.000 0.00 0.00 0.00 3.01
2756 8493 7.046033 TCCTTTTCTTCAAGTCGTTTAAGTCT 58.954 34.615 0.00 0.00 0.00 3.24
2757 8494 8.199449 TCCTTTTCTTCAAGTCGTTTAAGTCTA 58.801 33.333 0.00 0.00 0.00 2.59
2758 8495 8.989980 CCTTTTCTTCAAGTCGTTTAAGTCTAT 58.010 33.333 0.00 0.00 0.00 1.98
2759 8496 9.798885 CTTTTCTTCAAGTCGTTTAAGTCTATG 57.201 33.333 0.00 0.00 0.00 2.23
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 1.490490 CTAGCAGGGAAGGCCATTACA 59.510 52.381 5.01 0.00 35.15 2.41
76 77 5.861727 AGTACTATGGAACGAAAACCTGTT 58.138 37.500 0.00 0.00 0.00 3.16
77 78 5.476614 GAGTACTATGGAACGAAAACCTGT 58.523 41.667 0.00 0.00 0.00 4.00
88 89 5.062934 CGCAATTGAAACGAGTACTATGGAA 59.937 40.000 10.34 0.00 0.00 3.53
89 90 4.565166 CGCAATTGAAACGAGTACTATGGA 59.435 41.667 10.34 0.00 0.00 3.41
120 123 7.050970 TCTACAATAGCATGAAACCTATCGT 57.949 36.000 0.00 0.00 0.00 3.73
177 181 8.460831 AACAAAAACACATCAGTTTACAGAAC 57.539 30.769 0.00 0.00 40.60 3.01
194 198 7.377662 CCTTTCCATTACTCACGTAACAAAAAC 59.622 37.037 0.00 0.00 38.35 2.43
197 201 5.470777 CCCTTTCCATTACTCACGTAACAAA 59.529 40.000 0.00 0.00 38.35 2.83
198 202 4.998672 CCCTTTCCATTACTCACGTAACAA 59.001 41.667 0.00 0.00 38.35 2.83
199 203 4.563993 CCCCTTTCCATTACTCACGTAACA 60.564 45.833 0.00 0.00 38.35 2.41
204 208 2.781681 ACCCCTTTCCATTACTCACG 57.218 50.000 0.00 0.00 0.00 4.35
240 244 5.638234 GCAACGGACACTATCTCTACTTTTT 59.362 40.000 0.00 0.00 0.00 1.94
241 245 5.169295 GCAACGGACACTATCTCTACTTTT 58.831 41.667 0.00 0.00 0.00 2.27
242 246 4.219944 TGCAACGGACACTATCTCTACTTT 59.780 41.667 0.00 0.00 0.00 2.66
253 257 0.969149 TCTCAGATGCAACGGACACT 59.031 50.000 0.00 0.00 0.00 3.55
254 258 1.929836 GATCTCAGATGCAACGGACAC 59.070 52.381 0.00 0.00 0.00 3.67
282 286 1.227823 CCGCCTCAACCTGTTGACA 60.228 57.895 8.58 0.00 43.90 3.58
315 319 4.377021 TCGCTACTGTCAAAACATTCAGT 58.623 39.130 0.00 0.00 42.56 3.41
342 346 8.045507 TCAGATCTTTGAACTCTGCAGAATTAT 58.954 33.333 18.85 3.74 37.04 1.28
385 389 5.682943 TTCGGACAACAAAACTAATCAGG 57.317 39.130 0.00 0.00 0.00 3.86
401 405 1.144936 CCTCAGCTGGGATTCGGAC 59.855 63.158 17.43 0.00 0.00 4.79
402 406 1.306141 ACCTCAGCTGGGATTCGGA 60.306 57.895 17.43 0.00 0.00 4.55
440 444 3.198853 AGTTCTACTTCATCCTCTTGGCC 59.801 47.826 0.00 0.00 0.00 5.36
443 447 6.438259 TCGTAGTTCTACTTCATCCTCTTG 57.562 41.667 8.11 0.00 0.00 3.02
447 451 6.829298 TCTCAATCGTAGTTCTACTTCATCCT 59.171 38.462 8.11 0.00 0.00 3.24
455 459 8.745464 AGAAAAAGTCTCAATCGTAGTTCTAC 57.255 34.615 0.38 0.38 0.00 2.59
477 481 4.398358 CACACCTACATAGTCGAGGAAGAA 59.602 45.833 0.00 0.00 34.24 2.52
519 523 2.205074 CTACTAGCATGAGGGCAAACG 58.795 52.381 0.00 0.00 35.83 3.60
520 524 3.268023 ACTACTAGCATGAGGGCAAAC 57.732 47.619 0.00 0.00 35.83 2.93
528 532 4.276183 CGGCTCTAGAAACTACTAGCATGA 59.724 45.833 0.00 0.00 39.50 3.07
538 542 0.462759 GCATGCCGGCTCTAGAAACT 60.463 55.000 29.70 0.00 0.00 2.66
539 543 0.744414 TGCATGCCGGCTCTAGAAAC 60.744 55.000 29.70 8.78 34.04 2.78
540 544 0.744414 GTGCATGCCGGCTCTAGAAA 60.744 55.000 29.70 5.17 34.04 2.52
542 546 2.501128 GTGCATGCCGGCTCTAGA 59.499 61.111 29.70 7.00 34.04 2.43
544 548 3.716539 GACGTGCATGCCGGCTCTA 62.717 63.158 29.70 7.94 34.04 2.43
549 553 3.049674 AACTGACGTGCATGCCGG 61.050 61.111 25.35 16.11 0.00 6.13
550 554 1.840630 TTCAACTGACGTGCATGCCG 61.841 55.000 21.83 21.83 0.00 5.69
551 555 0.310543 TTTCAACTGACGTGCATGCC 59.689 50.000 16.68 5.63 0.00 4.40
605 609 3.994392 TGGAAATTCTTCTTCCGTTCGAG 59.006 43.478 0.00 0.00 44.61 4.04
610 614 4.459337 GGACAATGGAAATTCTTCTTCCGT 59.541 41.667 0.00 0.00 44.61 4.69
612 616 5.982890 TGGACAATGGAAATTCTTCTTCC 57.017 39.130 0.00 0.00 42.41 3.46
627 631 0.110486 ACGGCAAGGAGTTGGACAAT 59.890 50.000 0.00 0.00 33.87 2.71
633 637 2.328099 GGCTGACGGCAAGGAGTTG 61.328 63.158 8.86 0.00 44.01 3.16
644 649 1.685302 CGGTTCAATTTTGGCTGACG 58.315 50.000 0.00 0.00 0.00 4.35
649 654 1.006688 ACGGCGGTTCAATTTTGGC 60.007 52.632 13.24 0.00 0.00 4.52
681 686 2.607635 ACGCGGTAATAAATCTGCTGTG 59.392 45.455 12.47 0.00 34.23 3.66
704 709 0.618981 AGACGGGAATTCAACCCTCC 59.381 55.000 7.93 0.00 44.72 4.30
718 723 7.166804 CCTTGTTTATTTTTGTGTTACAGACGG 59.833 37.037 0.00 0.00 0.00 4.79
723 728 9.141400 GAACACCTTGTTTATTTTTGTGTTACA 57.859 29.630 5.23 0.00 43.26 2.41
735 740 3.749609 GGTAGCGTGAACACCTTGTTTAT 59.250 43.478 0.00 0.00 41.28 1.40
736 741 3.132925 GGTAGCGTGAACACCTTGTTTA 58.867 45.455 0.00 0.00 41.28 2.01
738 743 1.140252 AGGTAGCGTGAACACCTTGTT 59.860 47.619 0.00 0.00 44.37 2.83
740 745 1.148310 CAGGTAGCGTGAACACCTTG 58.852 55.000 0.00 0.00 40.77 3.61
741 746 0.602905 GCAGGTAGCGTGAACACCTT 60.603 55.000 0.00 0.00 40.77 3.50
742 747 1.004918 GCAGGTAGCGTGAACACCT 60.005 57.895 0.00 0.00 43.56 4.00
743 748 3.562635 GCAGGTAGCGTGAACACC 58.437 61.111 0.00 0.00 0.00 4.16
752 757 0.737715 CCGACTTGTGAGCAGGTAGC 60.738 60.000 0.00 0.00 46.19 3.58
754 759 0.601558 GACCGACTTGTGAGCAGGTA 59.398 55.000 0.00 0.00 36.49 3.08
755 760 1.367840 GACCGACTTGTGAGCAGGT 59.632 57.895 0.00 0.00 38.27 4.00
756 761 0.668706 CTGACCGACTTGTGAGCAGG 60.669 60.000 0.00 0.00 0.00 4.85
757 762 0.032678 ACTGACCGACTTGTGAGCAG 59.967 55.000 0.00 0.00 0.00 4.24
760 765 1.067060 TGACACTGACCGACTTGTGAG 59.933 52.381 0.00 0.00 34.81 3.51
761 766 1.107945 TGACACTGACCGACTTGTGA 58.892 50.000 0.00 0.00 34.81 3.58
764 769 1.548973 GCGTGACACTGACCGACTTG 61.549 60.000 3.68 0.00 0.00 3.16
765 770 1.299926 GCGTGACACTGACCGACTT 60.300 57.895 3.68 0.00 0.00 3.01
766 771 2.194212 AGCGTGACACTGACCGACT 61.194 57.895 3.68 0.00 0.00 4.18
767 772 2.016704 CAGCGTGACACTGACCGAC 61.017 63.158 3.68 0.00 37.32 4.79
768 773 2.335011 CAGCGTGACACTGACCGA 59.665 61.111 3.68 0.00 37.32 4.69
769 774 3.406361 GCAGCGTGACACTGACCG 61.406 66.667 4.56 0.00 37.32 4.79
770 775 1.669115 ATGCAGCGTGACACTGACC 60.669 57.895 4.56 0.00 37.32 4.02
771 776 1.494628 CATGCAGCGTGACACTGAC 59.505 57.895 9.20 0.00 37.32 3.51
772 777 2.319841 GCATGCAGCGTGACACTGA 61.320 57.895 19.40 0.00 37.32 3.41
773 778 2.175078 GCATGCAGCGTGACACTG 59.825 61.111 19.40 0.00 38.22 3.66
803 808 6.485984 GTGATCTTCAATTACATGCAGAGGAT 59.514 38.462 0.00 0.00 0.00 3.24
805 810 5.587443 TGTGATCTTCAATTACATGCAGAGG 59.413 40.000 0.00 0.00 0.00 3.69
806 811 6.673154 TGTGATCTTCAATTACATGCAGAG 57.327 37.500 0.00 0.00 0.00 3.35
808 813 7.080353 TCTTGTGATCTTCAATTACATGCAG 57.920 36.000 0.00 0.00 0.00 4.41
809 814 6.656270 ACTCTTGTGATCTTCAATTACATGCA 59.344 34.615 0.00 0.00 0.00 3.96
810 815 7.081526 ACTCTTGTGATCTTCAATTACATGC 57.918 36.000 0.00 0.00 0.00 4.06
811 816 9.376075 AGTACTCTTGTGATCTTCAATTACATG 57.624 33.333 0.00 0.00 0.00 3.21
817 822 7.147811 GGGAGTAGTACTCTTGTGATCTTCAAT 60.148 40.741 25.70 0.00 44.46 2.57
818 823 6.153000 GGGAGTAGTACTCTTGTGATCTTCAA 59.847 42.308 25.70 0.00 44.46 2.69
821 826 5.580998 TGGGAGTAGTACTCTTGTGATCTT 58.419 41.667 25.70 0.00 44.46 2.40
822 827 5.194473 TGGGAGTAGTACTCTTGTGATCT 57.806 43.478 25.70 0.00 44.46 2.75
823 828 5.185249 TGTTGGGAGTAGTACTCTTGTGATC 59.815 44.000 25.70 10.26 44.46 2.92
824 829 5.084519 TGTTGGGAGTAGTACTCTTGTGAT 58.915 41.667 25.70 0.00 44.46 3.06
825 830 4.476297 TGTTGGGAGTAGTACTCTTGTGA 58.524 43.478 25.70 8.52 44.46 3.58
826 831 4.866508 TGTTGGGAGTAGTACTCTTGTG 57.133 45.455 25.70 0.00 44.46 3.33
835 840 4.445879 GGAACCTCTTTTGTTGGGAGTAGT 60.446 45.833 0.00 0.00 0.00 2.73
843 848 4.893424 TCTTTCGGAACCTCTTTTGTTG 57.107 40.909 0.00 0.00 0.00 3.33
847 852 6.321435 ACATCTTTTCTTTCGGAACCTCTTTT 59.679 34.615 0.00 0.00 33.13 2.27
859 864 9.308318 GTAGGAGATACTCACATCTTTTCTTTC 57.692 37.037 0.00 0.00 35.37 2.62
860 865 9.041354 AGTAGGAGATACTCACATCTTTTCTTT 57.959 33.333 0.00 0.00 40.99 2.52
861 866 8.602472 AGTAGGAGATACTCACATCTTTTCTT 57.398 34.615 0.00 0.00 40.99 2.52
862 867 9.349713 CTAGTAGGAGATACTCACATCTTTTCT 57.650 37.037 0.00 0.00 43.90 2.52
863 868 9.127277 ACTAGTAGGAGATACTCACATCTTTTC 57.873 37.037 1.45 0.00 43.90 2.29
878 883 9.381033 GCGATTTATCAGTATACTAGTAGGAGA 57.619 37.037 4.74 4.45 0.00 3.71
879 884 8.614346 GGCGATTTATCAGTATACTAGTAGGAG 58.386 40.741 4.74 0.00 0.00 3.69
880 885 8.105197 TGGCGATTTATCAGTATACTAGTAGGA 58.895 37.037 4.74 0.00 0.00 2.94
881 886 8.277490 TGGCGATTTATCAGTATACTAGTAGG 57.723 38.462 4.74 0.00 0.00 3.18
882 887 9.776158 CTTGGCGATTTATCAGTATACTAGTAG 57.224 37.037 4.74 0.00 0.00 2.57
883 888 8.737175 CCTTGGCGATTTATCAGTATACTAGTA 58.263 37.037 4.74 4.77 0.00 1.82
884 889 7.232941 ACCTTGGCGATTTATCAGTATACTAGT 59.767 37.037 4.74 0.00 0.00 2.57
920 925 4.585879 TCAAGCTCCCTGTGGTTTATAAC 58.414 43.478 0.00 0.00 0.00 1.89
921 926 4.919774 TCAAGCTCCCTGTGGTTTATAA 57.080 40.909 0.00 0.00 0.00 0.98
954 6319 5.189342 ACTTGTGATGATGAGAGGTGAGATT 59.811 40.000 0.00 0.00 0.00 2.40
961 6326 3.197333 AGACCACTTGTGATGATGAGAGG 59.803 47.826 1.89 0.00 0.00 3.69
962 6327 4.160065 AGAGACCACTTGTGATGATGAGAG 59.840 45.833 1.89 0.00 0.00 3.20
963 6328 4.081807 CAGAGACCACTTGTGATGATGAGA 60.082 45.833 1.89 0.00 0.00 3.27
964 6329 4.182339 CAGAGACCACTTGTGATGATGAG 58.818 47.826 1.89 0.00 0.00 2.90
965 6330 3.618263 GCAGAGACCACTTGTGATGATGA 60.618 47.826 1.89 0.00 0.00 2.92
966 6331 2.676839 GCAGAGACCACTTGTGATGATG 59.323 50.000 1.89 0.00 0.00 3.07
967 6332 2.303890 TGCAGAGACCACTTGTGATGAT 59.696 45.455 1.89 0.00 0.00 2.45
977 6342 1.142748 CCCTCGATGCAGAGACCAC 59.857 63.158 4.59 0.00 40.57 4.16
978 6343 1.000359 TCCCTCGATGCAGAGACCA 60.000 57.895 4.59 0.00 40.57 4.02
979 6344 1.323271 TGTCCCTCGATGCAGAGACC 61.323 60.000 4.59 0.00 40.57 3.85
994 6359 2.512515 GCGAGGAGCCATGTGTCC 60.513 66.667 2.87 2.87 40.81 4.02
1183 6869 0.098200 CCGTCGAAGCTGTATCGTGA 59.902 55.000 6.21 0.00 40.99 4.35
1212 6898 0.480252 AAGAGAGCACCCAAAGCCTT 59.520 50.000 0.00 0.00 0.00 4.35
1214 6900 0.962855 GGAAGAGAGCACCCAAAGCC 60.963 60.000 0.00 0.00 0.00 4.35
1259 6945 4.821805 TGATCTCAGTCCTTGGTTTTGTTC 59.178 41.667 0.00 0.00 0.00 3.18
1260 6946 4.792068 TGATCTCAGTCCTTGGTTTTGTT 58.208 39.130 0.00 0.00 0.00 2.83
1263 6949 3.652869 TCCTGATCTCAGTCCTTGGTTTT 59.347 43.478 6.46 0.00 42.27 2.43
1272 6958 5.359576 ACTTACTGTCATCCTGATCTCAGTC 59.640 44.000 13.42 0.00 42.27 3.51
1307 6994 8.265055 CCCCCAATACATCGTAGTAATAATGAT 58.735 37.037 0.00 0.00 0.00 2.45
1320 7019 7.519032 AATTAATTACACCCCCAATACATCG 57.481 36.000 0.00 0.00 0.00 3.84
1324 7023 9.582648 ACTCATAATTAATTACACCCCCAATAC 57.417 33.333 10.07 0.00 0.00 1.89
1327 7036 9.411189 GTAACTCATAATTAATTACACCCCCAA 57.589 33.333 10.07 0.00 0.00 4.12
1329 7038 9.063615 CAGTAACTCATAATTAATTACACCCCC 57.936 37.037 10.07 0.00 0.00 5.40
1330 7039 9.841295 TCAGTAACTCATAATTAATTACACCCC 57.159 33.333 10.07 0.00 0.00 4.95
1345 7054 7.978975 GCAAGTAGAAGAAGATCAGTAACTCAT 59.021 37.037 0.00 0.00 0.00 2.90
1347 7056 7.274686 GTGCAAGTAGAAGAAGATCAGTAACTC 59.725 40.741 0.00 0.00 0.00 3.01
1371 7100 0.179134 GCTGTAGTCGTAGCCCTGTG 60.179 60.000 0.00 0.00 33.89 3.66
1372 7101 0.323542 AGCTGTAGTCGTAGCCCTGT 60.324 55.000 0.00 0.00 40.76 4.00
1438 7167 0.814010 GCATGATACACACCCCCGTC 60.814 60.000 0.00 0.00 0.00 4.79
1479 7208 4.120331 GCATGAACGTGCTGGCCC 62.120 66.667 0.00 0.00 41.82 5.80
1500 7229 2.657484 TAGCGCACCATCGTAGACGC 62.657 60.000 11.47 0.00 42.51 5.19
1522 7251 2.131294 CTAGCTGCCGGGCGTAGTAG 62.131 65.000 15.40 6.74 37.29 2.57
1530 7259 3.905678 CCTCGACTAGCTGCCGGG 61.906 72.222 2.18 0.00 0.00 5.73
1540 7269 5.067936 CCTGTTATAGATGTTGTCCTCGACT 59.932 44.000 0.00 0.00 33.15 4.18
1550 7279 4.383770 CCGGAACCACCTGTTATAGATGTT 60.384 45.833 0.00 0.00 37.29 2.71
1551 7280 3.134081 CCGGAACCACCTGTTATAGATGT 59.866 47.826 0.00 0.00 37.29 3.06
1559 7288 1.990160 TTCAGCCGGAACCACCTGTT 61.990 55.000 5.05 0.00 40.81 3.16
1595 7324 2.338984 GGTGAGTGTCGACGCCTT 59.661 61.111 24.75 8.09 34.33 4.35
1667 7396 2.223876 ACACGCCGAACTTGAAGAAGTA 60.224 45.455 0.00 0.00 41.87 2.24
1765 7495 7.955324 CCTCAAACATACACGTAATAACACAAG 59.045 37.037 0.00 0.00 0.00 3.16
1773 7505 5.416271 ACTCCCTCAAACATACACGTAAT 57.584 39.130 0.00 0.00 0.00 1.89
1777 7509 3.399330 ACAACTCCCTCAAACATACACG 58.601 45.455 0.00 0.00 0.00 4.49
1780 7512 7.448748 AACATAACAACTCCCTCAAACATAC 57.551 36.000 0.00 0.00 0.00 2.39
1783 7515 5.654650 ACAAACATAACAACTCCCTCAAACA 59.345 36.000 0.00 0.00 0.00 2.83
1784 7516 6.144078 ACAAACATAACAACTCCCTCAAAC 57.856 37.500 0.00 0.00 0.00 2.93
1785 7517 7.057894 AGTACAAACATAACAACTCCCTCAAA 58.942 34.615 0.00 0.00 0.00 2.69
1790 7522 6.148315 GTGGTAGTACAAACATAACAACTCCC 59.852 42.308 2.06 0.00 0.00 4.30
1797 7529 3.061161 CGGCGTGGTAGTACAAACATAAC 59.939 47.826 0.00 0.00 0.00 1.89
1817 7549 4.624364 TGCTCACCACACCTGCGG 62.624 66.667 0.00 0.00 0.00 5.69
1818 7550 1.915614 GATTGCTCACCACACCTGCG 61.916 60.000 0.00 0.00 0.00 5.18
1819 7551 0.607489 AGATTGCTCACCACACCTGC 60.607 55.000 0.00 0.00 0.00 4.85
1820 7552 1.808945 GAAGATTGCTCACCACACCTG 59.191 52.381 0.00 0.00 0.00 4.00
1821 7553 1.421268 TGAAGATTGCTCACCACACCT 59.579 47.619 0.00 0.00 0.00 4.00
1822 7554 1.896220 TGAAGATTGCTCACCACACC 58.104 50.000 0.00 0.00 0.00 4.16
1823 7555 3.988379 TTTGAAGATTGCTCACCACAC 57.012 42.857 0.00 0.00 0.00 3.82
1824 7556 4.143543 TGATTTGAAGATTGCTCACCACA 58.856 39.130 0.00 0.00 0.00 4.17
1825 7557 4.771590 TGATTTGAAGATTGCTCACCAC 57.228 40.909 0.00 0.00 0.00 4.16
1826 7558 5.392272 CGAATGATTTGAAGATTGCTCACCA 60.392 40.000 0.00 0.00 0.00 4.17
1827 7559 5.032863 CGAATGATTTGAAGATTGCTCACC 58.967 41.667 0.00 0.00 0.00 4.02
1828 7560 5.872635 TCGAATGATTTGAAGATTGCTCAC 58.127 37.500 0.00 0.00 0.00 3.51
1829 7561 6.149973 AGTTCGAATGATTTGAAGATTGCTCA 59.850 34.615 8.07 0.00 33.85 4.26
1830 7562 6.549952 AGTTCGAATGATTTGAAGATTGCTC 58.450 36.000 8.07 0.00 33.85 4.26
1831 7563 6.506500 AGTTCGAATGATTTGAAGATTGCT 57.493 33.333 8.07 0.00 33.85 3.91
1832 7564 7.912250 ACATAGTTCGAATGATTTGAAGATTGC 59.088 33.333 8.07 0.00 33.85 3.56
1833 7565 9.778993 AACATAGTTCGAATGATTTGAAGATTG 57.221 29.630 8.07 8.32 33.85 2.67
1863 7595 9.214957 CCTACAATGTACTTCACTTCATAACAA 57.785 33.333 0.00 0.00 0.00 2.83
1864 7596 8.372459 ACCTACAATGTACTTCACTTCATAACA 58.628 33.333 0.00 0.00 0.00 2.41
1865 7597 8.773404 ACCTACAATGTACTTCACTTCATAAC 57.227 34.615 0.00 0.00 0.00 1.89
1866 7598 8.038944 GGACCTACAATGTACTTCACTTCATAA 58.961 37.037 0.00 0.00 0.00 1.90
1867 7599 7.179516 TGGACCTACAATGTACTTCACTTCATA 59.820 37.037 0.00 0.00 0.00 2.15
1871 7603 5.818678 TGGACCTACAATGTACTTCACTT 57.181 39.130 0.00 0.00 0.00 3.16
1880 7612 7.402054 TGAAATAGTTCATGGACCTACAATGT 58.598 34.615 0.56 0.00 38.88 2.71
1885 7617 5.368989 CCCTGAAATAGTTCATGGACCTAC 58.631 45.833 18.88 0.00 46.89 3.18
1893 7625 4.927267 TGACACCCCTGAAATAGTTCAT 57.073 40.909 6.00 0.00 42.85 2.57
1934 7666 6.708054 ACTTCATGAACCTGGATATCGATTTC 59.292 38.462 1.71 5.08 0.00 2.17
1942 7674 7.399191 ACTTACTGTACTTCATGAACCTGGATA 59.601 37.037 3.38 0.00 0.00 2.59
1951 7683 4.039852 TGGCACACTTACTGTACTTCATGA 59.960 41.667 0.00 0.00 0.00 3.07
1953 7685 4.617253 TGGCACACTTACTGTACTTCAT 57.383 40.909 0.00 0.00 0.00 2.57
1972 7704 3.828451 ACACAGATTTTGGGTCTGAATGG 59.172 43.478 9.86 0.43 40.09 3.16
1993 7725 1.520342 GCCGATCAGGTGAGCTCAC 60.520 63.158 34.25 34.25 45.72 3.51
1994 7726 2.725312 GGCCGATCAGGTGAGCTCA 61.725 63.158 13.74 13.74 43.70 4.26
1997 7729 2.202987 CTGGCCGATCAGGTGAGC 60.203 66.667 0.00 0.00 43.70 4.26
1999 7731 1.381191 TAGCTGGCCGATCAGGTGA 60.381 57.895 16.17 0.00 44.10 4.02
2002 7734 1.068753 CACTAGCTGGCCGATCAGG 59.931 63.158 0.00 0.00 44.97 3.86
2007 7739 2.273179 AACGACACTAGCTGGCCGA 61.273 57.895 12.54 0.00 0.00 5.54
2017 7749 0.319555 CATCACGGGTCAACGACACT 60.320 55.000 0.00 0.00 33.17 3.55
2019 7751 0.105224 AACATCACGGGTCAACGACA 59.895 50.000 0.00 0.00 37.61 4.35
2021 7753 1.887854 TCTAACATCACGGGTCAACGA 59.112 47.619 0.00 0.00 37.61 3.85
2023 7755 3.000727 CCTTCTAACATCACGGGTCAAC 58.999 50.000 0.00 0.00 0.00 3.18
2064 7800 8.465999 TGAATTTATTTGCATATTTCCGTCACT 58.534 29.630 0.00 0.00 0.00 3.41
2091 7827 7.727331 TGAACATTTTTGGAAACCATGAATC 57.273 32.000 0.00 0.00 31.53 2.52
2103 7840 8.789825 TTTTCCATATCCATGAACATTTTTGG 57.210 30.769 0.00 0.00 33.67 3.28
2115 7852 8.543293 AGTCATGAACAATTTTCCATATCCAT 57.457 30.769 0.00 0.00 0.00 3.41
2116 7853 7.959658 AGTCATGAACAATTTTCCATATCCA 57.040 32.000 0.00 0.00 0.00 3.41
2197 7934 5.957796 CGTCCGCATACATTTTTCTAAAGTC 59.042 40.000 0.00 0.00 0.00 3.01
2204 7941 4.530094 TCATCGTCCGCATACATTTTTC 57.470 40.909 0.00 0.00 0.00 2.29
2213 7950 4.433186 TTTTCAAATTCATCGTCCGCAT 57.567 36.364 0.00 0.00 0.00 4.73
2214 7951 3.906014 TTTTCAAATTCATCGTCCGCA 57.094 38.095 0.00 0.00 0.00 5.69
2240 7977 2.214347 TCCAAGTTCATTGTTCGCGAA 58.786 42.857 19.38 19.38 37.17 4.70
2242 7979 2.679355 TTCCAAGTTCATTGTTCGCG 57.321 45.000 0.00 0.00 37.17 5.87
2243 7980 5.905480 ATTTTTCCAAGTTCATTGTTCGC 57.095 34.783 0.00 0.00 37.17 4.70
2244 7981 8.574196 AGTAATTTTTCCAAGTTCATTGTTCG 57.426 30.769 0.00 0.00 37.17 3.95
2245 7982 8.690840 CGAGTAATTTTTCCAAGTTCATTGTTC 58.309 33.333 0.00 0.00 37.17 3.18
2246 7983 7.169140 GCGAGTAATTTTTCCAAGTTCATTGTT 59.831 33.333 0.00 0.00 37.17 2.83
2248 7985 6.640499 TGCGAGTAATTTTTCCAAGTTCATTG 59.360 34.615 0.00 0.00 38.74 2.82
2249 7986 6.744112 TGCGAGTAATTTTTCCAAGTTCATT 58.256 32.000 0.00 0.00 0.00 2.57
2255 7992 5.121221 AGGTTGCGAGTAATTTTTCCAAG 57.879 39.130 0.00 0.00 0.00 3.61
2260 7997 9.758651 ATTTTCTTAAGGTTGCGAGTAATTTTT 57.241 25.926 1.85 0.00 0.00 1.94
2266 8003 6.870971 AACATTTTCTTAAGGTTGCGAGTA 57.129 33.333 1.85 0.00 0.00 2.59
2267 8004 5.767816 AACATTTTCTTAAGGTTGCGAGT 57.232 34.783 1.85 0.00 0.00 4.18
2268 8005 5.107875 GCAAACATTTTCTTAAGGTTGCGAG 60.108 40.000 1.85 0.00 0.00 5.03
2269 8006 4.742659 GCAAACATTTTCTTAAGGTTGCGA 59.257 37.500 1.85 0.00 0.00 5.10
2270 8007 4.505922 TGCAAACATTTTCTTAAGGTTGCG 59.494 37.500 9.14 0.00 0.00 4.85
2271 8008 5.982465 TGCAAACATTTTCTTAAGGTTGC 57.018 34.783 7.05 7.05 0.00 4.17
2272 8009 8.610896 TCATTTGCAAACATTTTCTTAAGGTTG 58.389 29.630 15.41 3.02 0.00 3.77
2273 8010 8.729805 TCATTTGCAAACATTTTCTTAAGGTT 57.270 26.923 15.41 0.00 0.00 3.50
2274 8011 8.907222 ATCATTTGCAAACATTTTCTTAAGGT 57.093 26.923 15.41 0.00 0.00 3.50
2351 8088 8.429299 ACAAACTTATTTTTGTTGTTCGTGAAC 58.571 29.630 5.80 5.80 45.45 3.18
2352 8089 8.428536 CACAAACTTATTTTTGTTGTTCGTGAA 58.571 29.630 0.00 0.00 45.45 3.18
2353 8090 7.808381 TCACAAACTTATTTTTGTTGTTCGTGA 59.192 29.630 0.00 0.00 45.45 4.35
2354 8091 7.890717 GTCACAAACTTATTTTTGTTGTTCGTG 59.109 33.333 0.00 0.00 45.45 4.35
2355 8092 7.810759 AGTCACAAACTTATTTTTGTTGTTCGT 59.189 29.630 0.00 0.00 45.45 3.85
2356 8093 8.168681 AGTCACAAACTTATTTTTGTTGTTCG 57.831 30.769 0.00 0.00 45.45 3.95
2372 8109 9.983431 GCGTACAATTTTATTAAAGTCACAAAC 57.017 29.630 0.00 0.00 0.00 2.93
2373 8110 8.893884 CGCGTACAATTTTATTAAAGTCACAAA 58.106 29.630 0.00 0.00 0.00 2.83
2374 8111 8.281194 TCGCGTACAATTTTATTAAAGTCACAA 58.719 29.630 5.77 0.00 0.00 3.33
2375 8112 7.794880 TCGCGTACAATTTTATTAAAGTCACA 58.205 30.769 5.77 0.00 0.00 3.58
2376 8113 8.644264 TTCGCGTACAATTTTATTAAAGTCAC 57.356 30.769 5.77 0.00 0.00 3.67
2377 8114 9.268255 CATTCGCGTACAATTTTATTAAAGTCA 57.732 29.630 5.77 0.00 0.00 3.41
2378 8115 9.480538 TCATTCGCGTACAATTTTATTAAAGTC 57.519 29.630 5.77 0.00 0.00 3.01
2379 8116 9.997482 ATCATTCGCGTACAATTTTATTAAAGT 57.003 25.926 5.77 0.00 0.00 2.66
2381 8118 9.989869 TCATCATTCGCGTACAATTTTATTAAA 57.010 25.926 5.77 0.00 0.00 1.52
2382 8119 9.989869 TTCATCATTCGCGTACAATTTTATTAA 57.010 25.926 5.77 0.00 0.00 1.40
2384 8121 9.515020 AATTCATCATTCGCGTACAATTTTATT 57.485 25.926 5.77 0.00 0.00 1.40
2385 8122 9.515020 AAATTCATCATTCGCGTACAATTTTAT 57.485 25.926 5.77 0.00 0.00 1.40
2386 8123 8.793472 CAAATTCATCATTCGCGTACAATTTTA 58.207 29.630 5.77 0.00 0.00 1.52
2387 8124 7.540400 TCAAATTCATCATTCGCGTACAATTTT 59.460 29.630 5.77 0.00 0.00 1.82
2388 8125 7.026562 TCAAATTCATCATTCGCGTACAATTT 58.973 30.769 5.77 6.01 0.00 1.82
2389 8126 6.550843 TCAAATTCATCATTCGCGTACAATT 58.449 32.000 5.77 0.00 0.00 2.32
2390 8127 6.117911 TCAAATTCATCATTCGCGTACAAT 57.882 33.333 5.77 0.00 0.00 2.71
2391 8128 5.538067 TCAAATTCATCATTCGCGTACAA 57.462 34.783 5.77 0.00 0.00 2.41
2392 8129 5.538067 TTCAAATTCATCATTCGCGTACA 57.462 34.783 5.77 0.00 0.00 2.90
2393 8130 6.846870 TTTTCAAATTCATCATTCGCGTAC 57.153 33.333 5.77 0.00 0.00 3.67
2447 8184 7.673810 ACATTTTCTTAAAGTTGCGTAACAC 57.326 32.000 18.75 0.00 39.30 3.32
2448 8185 8.587950 CAAACATTTTCTTAAAGTTGCGTAACA 58.412 29.630 18.75 0.00 39.30 2.41
2449 8186 7.577668 GCAAACATTTTCTTAAAGTTGCGTAAC 59.422 33.333 8.47 8.47 33.57 2.50
2450 8187 7.513814 CGCAAACATTTTCTTAAAGTTGCGTAA 60.514 33.333 16.69 0.00 45.59 3.18
2451 8188 6.075310 CGCAAACATTTTCTTAAAGTTGCGTA 60.075 34.615 16.69 0.00 45.59 4.42
2452 8189 5.276161 CGCAAACATTTTCTTAAAGTTGCGT 60.276 36.000 16.69 0.00 45.59 5.24
2456 8193 8.641499 TCATTCGCAAACATTTTCTTAAAGTT 57.359 26.923 0.00 0.00 0.00 2.66
2538 8275 4.375506 CGCGAACTTTTTGTTGTTGTTTGT 60.376 37.500 0.00 0.00 39.30 2.83
2540 8277 3.982058 TCGCGAACTTTTTGTTGTTGTTT 59.018 34.783 6.20 0.00 39.30 2.83
2558 8295 7.890879 TGTGAACATTTATTTCATATTCGCG 57.109 32.000 0.00 0.00 35.47 5.87
2559 8296 9.289303 AGTTGTGAACATTTATTTCATATTCGC 57.711 29.630 0.00 0.00 35.47 4.70
2574 8311 9.744468 GTGAATACCTTTTAAAGTTGTGAACAT 57.256 29.630 3.91 0.00 0.00 2.71
2575 8312 8.740906 TGTGAATACCTTTTAAAGTTGTGAACA 58.259 29.630 3.91 0.00 0.00 3.18
2576 8313 9.016623 GTGTGAATACCTTTTAAAGTTGTGAAC 57.983 33.333 3.91 0.00 0.00 3.18
2577 8314 8.740906 TGTGTGAATACCTTTTAAAGTTGTGAA 58.259 29.630 3.91 0.00 0.00 3.18
2578 8315 8.185505 GTGTGTGAATACCTTTTAAAGTTGTGA 58.814 33.333 3.91 0.00 0.00 3.58
2579 8316 7.971168 TGTGTGTGAATACCTTTTAAAGTTGTG 59.029 33.333 3.91 0.00 0.00 3.33
2580 8317 8.057536 TGTGTGTGAATACCTTTTAAAGTTGT 57.942 30.769 3.91 0.00 0.00 3.32
2581 8318 8.918961 TTGTGTGTGAATACCTTTTAAAGTTG 57.081 30.769 3.91 0.00 0.00 3.16
2588 8325 9.528018 CAAACTTATTGTGTGTGAATACCTTTT 57.472 29.630 0.00 0.00 0.00 2.27
2589 8326 8.908903 TCAAACTTATTGTGTGTGAATACCTTT 58.091 29.630 0.00 0.00 35.43 3.11
2590 8327 8.458573 TCAAACTTATTGTGTGTGAATACCTT 57.541 30.769 0.00 0.00 35.43 3.50
2591 8328 7.936847 TCTCAAACTTATTGTGTGTGAATACCT 59.063 33.333 0.00 0.00 34.56 3.08
2592 8329 8.015658 GTCTCAAACTTATTGTGTGTGAATACC 58.984 37.037 0.00 0.00 37.91 2.73
2593 8330 8.015658 GGTCTCAAACTTATTGTGTGTGAATAC 58.984 37.037 0.00 0.00 37.91 1.89
2594 8331 7.936847 AGGTCTCAAACTTATTGTGTGTGAATA 59.063 33.333 0.00 0.00 37.91 1.75
2595 8332 6.772716 AGGTCTCAAACTTATTGTGTGTGAAT 59.227 34.615 0.00 0.00 37.91 2.57
2596 8333 6.119536 AGGTCTCAAACTTATTGTGTGTGAA 58.880 36.000 0.00 0.00 37.91 3.18
2597 8334 5.680619 AGGTCTCAAACTTATTGTGTGTGA 58.319 37.500 0.00 0.00 34.96 3.58
2598 8335 6.481976 TGTAGGTCTCAAACTTATTGTGTGTG 59.518 38.462 0.00 0.00 35.43 3.82
2599 8336 6.588204 TGTAGGTCTCAAACTTATTGTGTGT 58.412 36.000 0.00 0.00 35.43 3.72
2600 8337 7.387673 TCATGTAGGTCTCAAACTTATTGTGTG 59.612 37.037 0.00 0.00 35.23 3.82
2601 8338 7.387948 GTCATGTAGGTCTCAAACTTATTGTGT 59.612 37.037 0.00 0.00 0.00 3.72
2602 8339 7.387673 TGTCATGTAGGTCTCAAACTTATTGTG 59.612 37.037 0.00 0.00 0.00 3.33
2603 8340 7.387948 GTGTCATGTAGGTCTCAAACTTATTGT 59.612 37.037 0.00 0.00 0.00 2.71
2604 8341 7.148407 GGTGTCATGTAGGTCTCAAACTTATTG 60.148 40.741 0.00 0.00 0.00 1.90
2605 8342 6.879458 GGTGTCATGTAGGTCTCAAACTTATT 59.121 38.462 0.00 0.00 0.00 1.40
2606 8343 6.213600 AGGTGTCATGTAGGTCTCAAACTTAT 59.786 38.462 0.00 0.00 0.00 1.73
2607 8344 5.542635 AGGTGTCATGTAGGTCTCAAACTTA 59.457 40.000 0.00 0.00 0.00 2.24
2608 8345 4.348168 AGGTGTCATGTAGGTCTCAAACTT 59.652 41.667 0.00 0.00 0.00 2.66
2609 8346 3.904339 AGGTGTCATGTAGGTCTCAAACT 59.096 43.478 0.00 0.00 0.00 2.66
2610 8347 4.273148 AGGTGTCATGTAGGTCTCAAAC 57.727 45.455 0.00 0.00 0.00 2.93
2611 8348 4.974645 AAGGTGTCATGTAGGTCTCAAA 57.025 40.909 0.00 0.00 0.00 2.69
2612 8349 4.346709 TCAAAGGTGTCATGTAGGTCTCAA 59.653 41.667 0.00 0.00 0.00 3.02
2613 8350 3.901222 TCAAAGGTGTCATGTAGGTCTCA 59.099 43.478 0.00 0.00 0.00 3.27
2614 8351 4.537135 TCAAAGGTGTCATGTAGGTCTC 57.463 45.455 0.00 0.00 0.00 3.36
2615 8352 4.974645 TTCAAAGGTGTCATGTAGGTCT 57.025 40.909 0.00 0.00 0.00 3.85
2616 8353 5.106157 CCATTTCAAAGGTGTCATGTAGGTC 60.106 44.000 0.00 0.00 0.00 3.85
2617 8354 4.766891 CCATTTCAAAGGTGTCATGTAGGT 59.233 41.667 0.00 0.00 0.00 3.08
2618 8355 4.766891 ACCATTTCAAAGGTGTCATGTAGG 59.233 41.667 0.00 0.00 36.60 3.18
2619 8356 5.964958 ACCATTTCAAAGGTGTCATGTAG 57.035 39.130 0.00 0.00 36.60 2.74
2620 8357 6.723298 AAACCATTTCAAAGGTGTCATGTA 57.277 33.333 0.00 0.00 38.37 2.29
2621 8358 5.612725 AAACCATTTCAAAGGTGTCATGT 57.387 34.783 0.00 0.00 38.37 3.21
2622 8359 6.015519 TCCTAAACCATTTCAAAGGTGTCATG 60.016 38.462 0.00 0.00 38.37 3.07
2623 8360 6.074648 TCCTAAACCATTTCAAAGGTGTCAT 58.925 36.000 0.00 0.00 38.37 3.06
2624 8361 5.450453 TCCTAAACCATTTCAAAGGTGTCA 58.550 37.500 0.00 0.00 38.37 3.58
2625 8362 6.213677 GTTCCTAAACCATTTCAAAGGTGTC 58.786 40.000 0.00 0.00 38.37 3.67
2626 8363 6.156748 GTTCCTAAACCATTTCAAAGGTGT 57.843 37.500 0.00 0.00 38.37 4.16
2640 8377 4.584327 AGTGCATTGTTGGTTCCTAAAC 57.416 40.909 0.00 0.00 34.46 2.01
2641 8378 4.646945 TGAAGTGCATTGTTGGTTCCTAAA 59.353 37.500 0.00 0.00 0.00 1.85
2642 8379 4.037446 GTGAAGTGCATTGTTGGTTCCTAA 59.963 41.667 0.00 0.00 0.00 2.69
2643 8380 3.568007 GTGAAGTGCATTGTTGGTTCCTA 59.432 43.478 0.00 0.00 0.00 2.94
2644 8381 2.362077 GTGAAGTGCATTGTTGGTTCCT 59.638 45.455 0.00 0.00 0.00 3.36
2645 8382 2.362077 AGTGAAGTGCATTGTTGGTTCC 59.638 45.455 0.00 0.00 0.00 3.62
2646 8383 3.316308 AGAGTGAAGTGCATTGTTGGTTC 59.684 43.478 0.00 0.00 0.00 3.62
2647 8384 3.290710 AGAGTGAAGTGCATTGTTGGTT 58.709 40.909 0.00 0.00 0.00 3.67
2648 8385 2.936202 AGAGTGAAGTGCATTGTTGGT 58.064 42.857 0.00 0.00 0.00 3.67
2649 8386 3.996150 AAGAGTGAAGTGCATTGTTGG 57.004 42.857 0.00 0.00 0.00 3.77
2650 8387 4.675510 ACAAAGAGTGAAGTGCATTGTTG 58.324 39.130 0.00 0.00 0.00 3.33
2651 8388 4.989279 ACAAAGAGTGAAGTGCATTGTT 57.011 36.364 0.00 0.00 0.00 2.83
2652 8389 4.989279 AACAAAGAGTGAAGTGCATTGT 57.011 36.364 0.00 0.00 0.00 2.71
2653 8390 6.671190 TCATAACAAAGAGTGAAGTGCATTG 58.329 36.000 0.00 0.00 0.00 2.82
2654 8391 6.712095 TCTCATAACAAAGAGTGAAGTGCATT 59.288 34.615 0.00 0.00 33.63 3.56
2655 8392 6.233434 TCTCATAACAAAGAGTGAAGTGCAT 58.767 36.000 0.00 0.00 33.63 3.96
2656 8393 5.610398 TCTCATAACAAAGAGTGAAGTGCA 58.390 37.500 0.00 0.00 33.63 4.57
2657 8394 6.183360 GGATCTCATAACAAAGAGTGAAGTGC 60.183 42.308 0.00 0.00 33.63 4.40
2658 8395 6.875726 TGGATCTCATAACAAAGAGTGAAGTG 59.124 38.462 0.00 0.00 33.63 3.16
2659 8396 7.009179 TGGATCTCATAACAAAGAGTGAAGT 57.991 36.000 0.00 0.00 33.63 3.01
2660 8397 7.412346 CGTTGGATCTCATAACAAAGAGTGAAG 60.412 40.741 0.00 0.00 33.63 3.02
2661 8398 6.368791 CGTTGGATCTCATAACAAAGAGTGAA 59.631 38.462 0.00 0.00 33.63 3.18
2662 8399 5.869344 CGTTGGATCTCATAACAAAGAGTGA 59.131 40.000 0.00 0.00 33.63 3.41
2663 8400 5.639506 ACGTTGGATCTCATAACAAAGAGTG 59.360 40.000 0.00 0.00 33.63 3.51
2664 8401 5.639506 CACGTTGGATCTCATAACAAAGAGT 59.360 40.000 0.00 0.00 33.63 3.24
2665 8402 5.869344 TCACGTTGGATCTCATAACAAAGAG 59.131 40.000 0.00 0.00 0.00 2.85
2666 8403 5.789521 TCACGTTGGATCTCATAACAAAGA 58.210 37.500 0.00 0.00 0.00 2.52
2667 8404 6.668541 ATCACGTTGGATCTCATAACAAAG 57.331 37.500 0.00 0.00 0.00 2.77
2668 8405 6.662414 GATCACGTTGGATCTCATAACAAA 57.338 37.500 8.28 0.00 40.41 2.83
2678 8415 6.042777 TCTTCAACATAGATCACGTTGGATC 58.957 40.000 16.93 7.61 43.21 3.36
2679 8416 5.977635 TCTTCAACATAGATCACGTTGGAT 58.022 37.500 16.93 0.00 40.31 3.41
2680 8417 5.185056 TCTCTTCAACATAGATCACGTTGGA 59.815 40.000 16.93 10.71 40.31 3.53
2681 8418 5.410924 TCTCTTCAACATAGATCACGTTGG 58.589 41.667 16.93 6.84 40.31 3.77
2682 8419 6.808704 TCTTCTCTTCAACATAGATCACGTTG 59.191 38.462 13.00 13.00 41.07 4.10
2683 8420 6.925211 TCTTCTCTTCAACATAGATCACGTT 58.075 36.000 0.00 0.00 0.00 3.99
2684 8421 6.516739 TCTTCTCTTCAACATAGATCACGT 57.483 37.500 0.00 0.00 0.00 4.49
2685 8422 7.818493 TTTCTTCTCTTCAACATAGATCACG 57.182 36.000 0.00 0.00 0.00 4.35
2686 8423 9.376075 TGATTTCTTCTCTTCAACATAGATCAC 57.624 33.333 0.00 0.00 0.00 3.06
2687 8424 9.376075 GTGATTTCTTCTCTTCAACATAGATCA 57.624 33.333 0.00 0.00 0.00 2.92
2688 8425 8.538856 CGTGATTTCTTCTCTTCAACATAGATC 58.461 37.037 0.00 0.00 0.00 2.75
2689 8426 7.010923 GCGTGATTTCTTCTCTTCAACATAGAT 59.989 37.037 0.00 0.00 0.00 1.98
2690 8427 6.311445 GCGTGATTTCTTCTCTTCAACATAGA 59.689 38.462 0.00 0.00 0.00 1.98
2691 8428 6.456181 GGCGTGATTTCTTCTCTTCAACATAG 60.456 42.308 0.00 0.00 0.00 2.23
2692 8429 5.351465 GGCGTGATTTCTTCTCTTCAACATA 59.649 40.000 0.00 0.00 0.00 2.29
2693 8430 4.154918 GGCGTGATTTCTTCTCTTCAACAT 59.845 41.667 0.00 0.00 0.00 2.71
2694 8431 3.498397 GGCGTGATTTCTTCTCTTCAACA 59.502 43.478 0.00 0.00 0.00 3.33
2695 8432 3.498397 TGGCGTGATTTCTTCTCTTCAAC 59.502 43.478 0.00 0.00 0.00 3.18
2696 8433 3.498397 GTGGCGTGATTTCTTCTCTTCAA 59.502 43.478 0.00 0.00 0.00 2.69
2697 8434 3.067106 GTGGCGTGATTTCTTCTCTTCA 58.933 45.455 0.00 0.00 0.00 3.02
2698 8435 3.067106 TGTGGCGTGATTTCTTCTCTTC 58.933 45.455 0.00 0.00 0.00 2.87
2699 8436 3.070018 CTGTGGCGTGATTTCTTCTCTT 58.930 45.455 0.00 0.00 0.00 2.85
2700 8437 2.300152 TCTGTGGCGTGATTTCTTCTCT 59.700 45.455 0.00 0.00 0.00 3.10
2701 8438 2.413453 GTCTGTGGCGTGATTTCTTCTC 59.587 50.000 0.00 0.00 0.00 2.87
2702 8439 2.417719 GTCTGTGGCGTGATTTCTTCT 58.582 47.619 0.00 0.00 0.00 2.85
2703 8440 1.464997 GGTCTGTGGCGTGATTTCTTC 59.535 52.381 0.00 0.00 0.00 2.87
2704 8441 1.202758 TGGTCTGTGGCGTGATTTCTT 60.203 47.619 0.00 0.00 0.00 2.52
2705 8442 0.396435 TGGTCTGTGGCGTGATTTCT 59.604 50.000 0.00 0.00 0.00 2.52
2706 8443 0.798776 CTGGTCTGTGGCGTGATTTC 59.201 55.000 0.00 0.00 0.00 2.17
2707 8444 1.237285 GCTGGTCTGTGGCGTGATTT 61.237 55.000 0.00 0.00 0.00 2.17
2708 8445 1.672356 GCTGGTCTGTGGCGTGATT 60.672 57.895 0.00 0.00 0.00 2.57
2709 8446 2.046892 GCTGGTCTGTGGCGTGAT 60.047 61.111 0.00 0.00 0.00 3.06
2710 8447 2.882677 ATGCTGGTCTGTGGCGTGA 61.883 57.895 0.00 0.00 0.00 4.35
2711 8448 2.359107 ATGCTGGTCTGTGGCGTG 60.359 61.111 0.00 0.00 0.00 5.34
2712 8449 2.189191 ATCATGCTGGTCTGTGGCGT 62.189 55.000 0.00 0.00 0.00 5.68
2713 8450 1.434622 GATCATGCTGGTCTGTGGCG 61.435 60.000 0.00 0.00 0.00 5.69
2714 8451 1.099879 GGATCATGCTGGTCTGTGGC 61.100 60.000 0.00 0.00 0.00 5.01
2715 8452 0.545171 AGGATCATGCTGGTCTGTGG 59.455 55.000 0.00 0.00 0.00 4.17
2716 8453 2.414994 AAGGATCATGCTGGTCTGTG 57.585 50.000 0.00 0.00 0.00 3.66
2717 8454 3.009916 AGAAAAGGATCATGCTGGTCTGT 59.990 43.478 0.00 0.00 0.00 3.41
2718 8455 3.618351 AGAAAAGGATCATGCTGGTCTG 58.382 45.455 0.00 0.00 0.00 3.51
2719 8456 4.263639 TGAAGAAAAGGATCATGCTGGTCT 60.264 41.667 0.00 0.00 0.00 3.85
2720 8457 4.012374 TGAAGAAAAGGATCATGCTGGTC 58.988 43.478 0.00 0.00 0.00 4.02
2721 8458 4.038271 TGAAGAAAAGGATCATGCTGGT 57.962 40.909 0.00 0.00 0.00 4.00
2722 8459 4.461781 ACTTGAAGAAAAGGATCATGCTGG 59.538 41.667 0.00 0.00 0.00 4.85
2723 8460 5.638783 GACTTGAAGAAAAGGATCATGCTG 58.361 41.667 0.00 0.00 0.00 4.41
2724 8461 4.394300 CGACTTGAAGAAAAGGATCATGCT 59.606 41.667 0.00 0.00 0.00 3.79
2725 8462 4.154918 ACGACTTGAAGAAAAGGATCATGC 59.845 41.667 0.00 0.00 0.00 4.06
2726 8463 5.869753 ACGACTTGAAGAAAAGGATCATG 57.130 39.130 0.00 0.00 0.00 3.07
2727 8464 6.884280 AAACGACTTGAAGAAAAGGATCAT 57.116 33.333 0.00 0.00 0.00 2.45
2728 8465 7.497909 ACTTAAACGACTTGAAGAAAAGGATCA 59.502 33.333 0.00 0.00 0.00 2.92
2729 8466 7.862648 ACTTAAACGACTTGAAGAAAAGGATC 58.137 34.615 0.00 0.00 0.00 3.36
2730 8467 7.715686 AGACTTAAACGACTTGAAGAAAAGGAT 59.284 33.333 0.00 0.00 0.00 3.24
2731 8468 7.046033 AGACTTAAACGACTTGAAGAAAAGGA 58.954 34.615 0.00 0.00 0.00 3.36
2732 8469 7.247929 AGACTTAAACGACTTGAAGAAAAGG 57.752 36.000 0.00 0.00 0.00 3.11
2733 8470 9.798885 CATAGACTTAAACGACTTGAAGAAAAG 57.201 33.333 0.00 0.00 0.00 2.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.