Multiple sequence alignment - TraesCS7D01G203800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G203800 chr7D 100.000 8948 0 0 1 8948 161537089 161546036 0.000000e+00 16524.0
1 TraesCS7D01G203800 chr7D 93.880 866 41 5 5336 6199 438070493 438069638 0.000000e+00 1295.0
2 TraesCS7D01G203800 chr7D 84.743 603 85 6 5336 5933 524874970 524875570 1.660000e-166 597.0
3 TraesCS7D01G203800 chr7A 93.030 2023 78 33 647 2644 162897923 162899907 0.000000e+00 2896.0
4 TraesCS7D01G203800 chr7A 94.904 942 37 5 4400 5336 162912022 162912957 0.000000e+00 1463.0
5 TraesCS7D01G203800 chr7A 89.974 1137 53 16 3041 4165 162900461 162901548 0.000000e+00 1411.0
6 TraesCS7D01G203800 chr7A 88.619 1072 77 21 7836 8866 162915896 162916963 0.000000e+00 1262.0
7 TraesCS7D01G203800 chr7A 89.510 1020 69 16 6805 7814 162914917 162915908 0.000000e+00 1256.0
8 TraesCS7D01G203800 chr7A 88.208 636 33 15 5 616 162897230 162897847 0.000000e+00 721.0
9 TraesCS7D01G203800 chr7A 95.082 366 18 0 2643 3008 162900093 162900458 2.170000e-160 577.0
10 TraesCS7D01G203800 chr7A 91.892 185 12 3 4165 4347 689378120 689378303 1.150000e-63 255.0
11 TraesCS7D01G203800 chr7A 95.062 81 4 0 4327 4407 162901550 162901630 2.620000e-25 128.0
12 TraesCS7D01G203800 chr7A 86.420 81 7 2 8868 8948 477204880 477204804 1.600000e-12 86.1
13 TraesCS7D01G203800 chr7A 90.196 51 4 1 8106 8155 479342618 479342568 2.090000e-06 65.8
14 TraesCS7D01G203800 chr7B 87.540 2480 167 57 94 2489 123809748 123812169 0.000000e+00 2737.0
15 TraesCS7D01G203800 chr7B 91.371 1043 53 17 6805 7816 123816635 123817671 0.000000e+00 1393.0
16 TraesCS7D01G203800 chr7B 90.291 1030 70 17 4325 5336 123815269 123816286 0.000000e+00 1321.0
17 TraesCS7D01G203800 chr7B 96.064 686 21 4 2762 3444 123814072 123814754 0.000000e+00 1112.0
18 TraesCS7D01G203800 chr7B 93.974 531 24 4 3638 4166 123814746 123815270 0.000000e+00 797.0
19 TraesCS7D01G203800 chr7B 87.350 585 45 13 7819 8382 123817638 123818214 2.110000e-180 643.0
20 TraesCS7D01G203800 chr7B 85.830 494 55 8 5938 6424 8852597 8853082 2.230000e-140 510.0
21 TraesCS7D01G203800 chr7B 95.608 296 9 2 2482 2777 123812356 123812647 1.050000e-128 472.0
22 TraesCS7D01G203800 chr7B 75.000 668 156 10 5336 5998 549943540 549944201 1.890000e-76 298.0
23 TraesCS7D01G203800 chr7B 87.059 85 11 0 6723 6807 385504433 385504349 7.390000e-16 97.1
24 TraesCS7D01G203800 chr6B 93.559 947 45 10 5352 6290 506716050 506716988 0.000000e+00 1397.0
25 TraesCS7D01G203800 chr2D 84.400 1109 150 16 5325 6422 26473863 26472767 0.000000e+00 1068.0
26 TraesCS7D01G203800 chr2D 96.970 165 5 0 4162 4326 362930972 362930808 2.460000e-70 278.0
27 TraesCS7D01G203800 chr2D 95.808 167 6 1 4164 4329 134632171 134632337 1.480000e-67 268.0
28 TraesCS7D01G203800 chr2D 94.706 170 9 0 4157 4326 87407533 87407364 1.920000e-66 265.0
29 TraesCS7D01G203800 chr2D 90.588 85 6 2 8865 8948 218774112 218774029 2.640000e-20 111.0
30 TraesCS7D01G203800 chr1A 85.174 978 125 9 5456 6424 278666756 278665790 0.000000e+00 985.0
31 TraesCS7D01G203800 chr1A 91.146 192 16 1 5337 5528 49881333 49881523 8.910000e-65 259.0
32 TraesCS7D01G203800 chr1A 92.593 81 6 0 8868 8948 545923186 545923106 5.680000e-22 117.0
33 TraesCS7D01G203800 chr1A 86.458 96 11 2 6723 6818 372237242 372237149 4.420000e-18 104.0
34 TraesCS7D01G203800 chr5D 85.665 872 111 9 5331 6198 311482804 311481943 0.000000e+00 905.0
35 TraesCS7D01G203800 chr5D 95.882 170 7 0 4160 4329 53583072 53583241 8.850000e-70 276.0
36 TraesCS7D01G203800 chr5D 85.057 87 12 1 6721 6807 541806266 541806181 4.450000e-13 87.9
37 TraesCS7D01G203800 chr5D 84.337 83 13 0 6720 6802 419388643 419388725 2.070000e-11 82.4
38 TraesCS7D01G203800 chr5A 85.444 900 96 11 5427 6310 85290138 85289258 0.000000e+00 904.0
39 TraesCS7D01G203800 chr5A 91.667 84 7 0 8865 8948 643238537 643238620 5.680000e-22 117.0
40 TraesCS7D01G203800 chr1D 86.331 834 102 8 5332 6162 286756325 286757149 0.000000e+00 898.0
41 TraesCS7D01G203800 chr1D 90.278 144 12 2 4729 4872 296535329 296535188 4.270000e-43 187.0
42 TraesCS7D01G203800 chr1D 93.000 100 6 1 4055 4154 296536175 296536077 2.600000e-30 145.0
43 TraesCS7D01G203800 chr1D 87.395 119 12 3 4920 5038 296535102 296534987 5.640000e-27 134.0
44 TraesCS7D01G203800 chr1D 87.179 78 10 0 6731 6808 488952130 488952053 1.240000e-13 89.8
45 TraesCS7D01G203800 chrUn 82.239 518 87 5 5475 5990 196714152 196714666 8.250000e-120 442.0
46 TraesCS7D01G203800 chrUn 82.239 518 87 5 5475 5990 325093946 325093432 8.250000e-120 442.0
47 TraesCS7D01G203800 chrUn 87.179 78 10 0 6729 6806 211065374 211065297 1.240000e-13 89.8
48 TraesCS7D01G203800 chr3D 97.006 167 4 1 4161 4326 32623524 32623358 6.840000e-71 279.0
49 TraesCS7D01G203800 chr3D 94.767 172 8 1 4155 4326 537154693 537154863 5.330000e-67 267.0
50 TraesCS7D01G203800 chr3D 82.012 328 38 16 4723 5035 527003891 527004212 8.910000e-65 259.0
51 TraesCS7D01G203800 chr3D 92.000 100 4 4 4055 4154 527003053 527003148 4.360000e-28 137.0
52 TraesCS7D01G203800 chr3D 89.535 86 5 4 8862 8946 289161691 289161609 1.230000e-18 106.0
53 TraesCS7D01G203800 chr3D 84.884 86 13 0 6723 6808 572009057 572009142 4.450000e-13 87.9
54 TraesCS7D01G203800 chr3A 94.220 173 10 0 4157 4329 648037278 648037450 1.920000e-66 265.0
55 TraesCS7D01G203800 chr3A 86.667 195 20 5 4723 4913 661646565 661646757 2.530000e-50 211.0
56 TraesCS7D01G203800 chr3A 94.624 93 5 0 4055 4147 661646084 661646176 2.600000e-30 145.0
57 TraesCS7D01G203800 chr3A 88.462 104 11 1 4932 5035 661646810 661646912 3.390000e-24 124.0
58 TraesCS7D01G203800 chr5B 94.675 169 9 0 4158 4326 490757405 490757573 6.890000e-66 263.0
59 TraesCS7D01G203800 chr5B 86.517 89 9 3 6723 6810 603807155 603807241 2.660000e-15 95.3
60 TraesCS7D01G203800 chr5B 85.897 78 10 1 6733 6810 603807228 603807152 2.070000e-11 82.4
61 TraesCS7D01G203800 chr1B 81.587 315 38 16 4723 5021 570295924 570295614 8.980000e-60 243.0
62 TraesCS7D01G203800 chr1B 92.000 100 7 1 4055 4154 570296940 570296842 1.210000e-28 139.0
63 TraesCS7D01G203800 chr3B 88.205 195 17 5 4723 4913 696735695 696735887 2.510000e-55 228.0
64 TraesCS7D01G203800 chr3B 95.699 93 4 0 4055 4147 696735159 696735251 5.600000e-32 150.0
65 TraesCS7D01G203800 chr3B 90.385 104 9 1 4932 5035 696735940 696736042 1.570000e-27 135.0
66 TraesCS7D01G203800 chr2B 94.949 99 2 2 5333 5430 24986244 24986148 1.560000e-32 152.0
67 TraesCS7D01G203800 chr2B 90.385 52 5 0 8106 8157 772185601 772185652 1.610000e-07 69.4
68 TraesCS7D01G203800 chr4A 91.667 84 7 0 8865 8948 105229083 105229166 5.680000e-22 117.0
69 TraesCS7D01G203800 chr6A 75.000 228 52 3 8231 8454 377857987 377858213 5.720000e-17 100.0
70 TraesCS7D01G203800 chr6A 91.781 73 3 3 8865 8936 566074982 566075052 2.060000e-16 99.0
71 TraesCS7D01G203800 chr4D 91.304 69 3 3 8865 8931 309639509 309639576 3.440000e-14 91.6
72 TraesCS7D01G203800 chr2A 87.013 77 9 1 8870 8946 95022853 95022928 1.600000e-12 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G203800 chr7D 161537089 161546036 8947 False 16524.000000 16524 100.000000 1 8948 1 chr7D.!!$F1 8947
1 TraesCS7D01G203800 chr7D 438069638 438070493 855 True 1295.000000 1295 93.880000 5336 6199 1 chr7D.!!$R1 863
2 TraesCS7D01G203800 chr7D 524874970 524875570 600 False 597.000000 597 84.743000 5336 5933 1 chr7D.!!$F2 597
3 TraesCS7D01G203800 chr7A 162912022 162916963 4941 False 1327.000000 1463 91.011000 4400 8866 3 chr7A.!!$F3 4466
4 TraesCS7D01G203800 chr7A 162897230 162901630 4400 False 1146.600000 2896 92.271200 5 4407 5 chr7A.!!$F2 4402
5 TraesCS7D01G203800 chr7B 123809748 123818214 8466 False 1210.714286 2737 91.742571 94 8382 7 chr7B.!!$F3 8288
6 TraesCS7D01G203800 chr7B 549943540 549944201 661 False 298.000000 298 75.000000 5336 5998 1 chr7B.!!$F2 662
7 TraesCS7D01G203800 chr6B 506716050 506716988 938 False 1397.000000 1397 93.559000 5352 6290 1 chr6B.!!$F1 938
8 TraesCS7D01G203800 chr2D 26472767 26473863 1096 True 1068.000000 1068 84.400000 5325 6422 1 chr2D.!!$R1 1097
9 TraesCS7D01G203800 chr1A 278665790 278666756 966 True 985.000000 985 85.174000 5456 6424 1 chr1A.!!$R1 968
10 TraesCS7D01G203800 chr5D 311481943 311482804 861 True 905.000000 905 85.665000 5331 6198 1 chr5D.!!$R1 867
11 TraesCS7D01G203800 chr5A 85289258 85290138 880 True 904.000000 904 85.444000 5427 6310 1 chr5A.!!$R1 883
12 TraesCS7D01G203800 chr1D 286756325 286757149 824 False 898.000000 898 86.331000 5332 6162 1 chr1D.!!$F1 830
13 TraesCS7D01G203800 chrUn 196714152 196714666 514 False 442.000000 442 82.239000 5475 5990 1 chrUn.!!$F1 515
14 TraesCS7D01G203800 chrUn 325093432 325093946 514 True 442.000000 442 82.239000 5475 5990 1 chrUn.!!$R2 515

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
49 55 0.034089 TCGATCTCCACTCCTCTGCA 60.034 55.0 0.00 0.00 0.00 4.41 F
355 392 0.174845 CGCCCAAGATTGAGGTACGA 59.825 55.0 0.00 0.00 0.00 3.43 F
580 632 0.321671 TACAGCTGGTGTTGAGAGGC 59.678 55.0 19.93 0.00 40.94 4.70 F
2318 2475 0.185901 ACTTTGAGGGCTTTGCTCCA 59.814 50.0 0.00 0.00 0.00 3.86 F
2967 4949 0.595095 CAAGCAACTTCCACCAGAGC 59.405 55.0 0.00 0.00 0.00 4.09 F
3741 5737 0.312416 TGCCCGAACATTTTGAACGG 59.688 50.0 0.00 0.00 38.45 4.44 F
4633 6640 0.459585 TCGCGTATCAAAGGCAGACC 60.460 55.0 5.77 0.00 38.96 3.85 F
5453 7468 0.389817 GAGCGTGGTGTGAGCATGTA 60.390 55.0 0.00 0.00 35.22 2.29 F
7095 10699 0.100682 GGATGCTCGCGAGAACTACA 59.899 55.0 38.74 25.73 41.32 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1347 1498 0.671781 GAGAGCACGACTGCACCAAT 60.672 55.000 0.52 0.0 46.97 3.16 R
1441 1592 2.099141 TCATCCAACTAGTGCACAGC 57.901 50.000 21.04 0.0 0.00 4.40 R
2531 2882 1.454847 TGGGCAGTGTCCAAACCAC 60.455 57.895 15.80 0.0 32.75 4.16 R
3602 5598 0.182061 CTCAGGCACCATGGCACTAT 59.818 55.000 13.04 0.0 46.46 2.12 R
4352 6350 0.106719 CCAACCCAGTGAACCAGTGT 60.107 55.000 0.00 0.0 33.37 3.55 R
5453 7468 0.179000 CCGAGGCTGAGCAACCTTAT 59.821 55.000 6.82 0.0 36.05 1.73 R
6365 8398 0.179009 ATCGCCCATGGAATCACCTG 60.179 55.000 15.22 0.0 39.86 4.00 R
7326 10957 0.104120 CACCATTATCTCGGCGGACA 59.896 55.000 7.21 0.0 0.00 4.02 R
8908 12595 0.039617 TTCTGCAAAAACGCCCGATG 60.040 50.000 0.00 0.0 0.00 3.84 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 55 0.034089 TCGATCTCCACTCCTCTGCA 60.034 55.000 0.00 0.00 0.00 4.41
145 155 8.478877 TCTCCTGACAGGAATTATTTAGTCTTC 58.521 37.037 24.34 0.00 45.28 2.87
146 156 8.380742 TCCTGACAGGAATTATTTAGTCTTCT 57.619 34.615 22.30 0.00 42.51 2.85
147 157 8.826765 TCCTGACAGGAATTATTTAGTCTTCTT 58.173 33.333 22.30 0.00 42.51 2.52
148 158 9.454859 CCTGACAGGAATTATTTAGTCTTCTTT 57.545 33.333 17.22 0.00 37.67 2.52
240 268 1.815421 GCGGGGCGATATATGCTGG 60.815 63.158 0.00 0.00 0.00 4.85
243 271 1.815421 GGGCGATATATGCTGGCCG 60.815 63.158 0.00 0.00 44.66 6.13
244 272 1.815421 GGCGATATATGCTGGCCGG 60.815 63.158 7.41 7.41 33.58 6.13
246 274 1.219124 CGATATATGCTGGCCGGCT 59.781 57.895 35.60 23.17 0.00 5.52
247 275 0.391661 CGATATATGCTGGCCGGCTT 60.392 55.000 35.60 30.86 0.00 4.35
342 379 4.884257 GCGTATCCGAGCGCCCAA 62.884 66.667 2.29 0.00 46.93 4.12
346 383 0.249911 GTATCCGAGCGCCCAAGATT 60.250 55.000 2.29 0.00 0.00 2.40
352 389 0.178068 GAGCGCCCAAGATTGAGGTA 59.822 55.000 2.29 0.00 0.00 3.08
355 392 0.174845 CGCCCAAGATTGAGGTACGA 59.825 55.000 0.00 0.00 0.00 3.43
405 442 8.133024 TCACCATATTTTCTGCTATTTTGGTT 57.867 30.769 0.00 0.00 32.84 3.67
452 489 2.169832 TCTGCTCCTTTTCGTTGAGG 57.830 50.000 0.00 0.00 0.00 3.86
459 496 5.300792 TGCTCCTTTTCGTTGAGGTTTTTAT 59.699 36.000 0.00 0.00 34.57 1.40
462 499 7.306574 GCTCCTTTTCGTTGAGGTTTTTATTTG 60.307 37.037 0.00 0.00 34.57 2.32
467 504 3.121496 CGTTGAGGTTTTTATTTGTGCGC 60.121 43.478 0.00 0.00 0.00 6.09
489 526 5.856455 CGCAAGAACTCAACCGAAATAATTT 59.144 36.000 0.00 0.00 43.02 1.82
523 560 5.569059 GGTTTTCTTCGCAATCATAGTTGTG 59.431 40.000 0.00 0.00 40.13 3.33
580 632 0.321671 TACAGCTGGTGTTGAGAGGC 59.678 55.000 19.93 0.00 40.94 4.70
611 664 9.190317 ACATCATCACTCATCAGTACTTAGTAA 57.810 33.333 0.00 0.00 0.00 2.24
618 704 9.163899 CACTCATCAGTACTTAGTAACTACAGA 57.836 37.037 0.00 1.63 0.00 3.41
663 760 5.744171 TGAAAAGCTGGTCATCATAAGCTA 58.256 37.500 0.00 0.00 45.04 3.32
692 794 9.847224 AGTATTTTGTCAAAGAAGTTCTAGGAA 57.153 29.630 5.65 0.00 0.00 3.36
721 823 2.350522 CACTGGTCATCTTTCTTCCCG 58.649 52.381 0.00 0.00 0.00 5.14
730 832 6.869388 GGTCATCTTTCTTCCCGAGTATTATC 59.131 42.308 0.00 0.00 0.00 1.75
733 835 6.651975 TCTTTCTTCCCGAGTATTATCCTC 57.348 41.667 0.00 0.00 0.00 3.71
742 844 7.272978 TCCCGAGTATTATCCTCTTCTTTTTG 58.727 38.462 0.00 0.00 0.00 2.44
768 870 6.652481 TCAAGAAGCCTTCAAGATAGTTTCTG 59.348 38.462 7.29 0.00 33.93 3.02
775 877 6.969473 GCCTTCAAGATAGTTTCTGCAAATAC 59.031 38.462 0.00 0.00 33.93 1.89
841 951 5.301551 ACATGATGGTGAAGTACTTTGCAAA 59.698 36.000 12.14 12.14 0.00 3.68
855 965 9.906660 AGTACTTTGCAAATTTTCATAATCGAA 57.093 25.926 13.23 0.00 0.00 3.71
897 1032 3.028130 ACACATGTTTTCCCGGTTCTTT 58.972 40.909 0.00 0.00 0.00 2.52
920 1057 6.166984 TGTGAATTCTTCTGTCTTCTGAGT 57.833 37.500 7.05 0.00 0.00 3.41
1063 1206 3.183775 CGAGGTGTGTTTTCTTACCTTCG 59.816 47.826 0.00 0.00 43.28 3.79
1093 1236 1.302033 CGTCTTGGTGAGGCTTGCT 60.302 57.895 0.00 0.00 0.00 3.91
1111 1254 3.531538 TGCTAAGTCGATTTGGGCTTAG 58.468 45.455 16.50 14.28 41.74 2.18
1188 1338 5.065914 CCGGACAAGATTTGATATGATGGT 58.934 41.667 0.00 0.00 0.00 3.55
1246 1397 9.825972 AAATTTATGACTTCGTCAACAATACTG 57.174 29.630 0.36 0.00 45.96 2.74
1256 1407 4.656041 GTCAACAATACTGCTGAGATTGC 58.344 43.478 16.76 0.00 34.55 3.56
1268 1419 3.670091 GCTGAGATTGCTTCACTTGCTTC 60.670 47.826 0.00 0.00 0.00 3.86
1271 1422 4.214971 TGAGATTGCTTCACTTGCTTCTTC 59.785 41.667 0.00 0.00 0.00 2.87
1272 1423 4.396522 AGATTGCTTCACTTGCTTCTTCT 58.603 39.130 0.00 0.00 0.00 2.85
1273 1424 4.826183 AGATTGCTTCACTTGCTTCTTCTT 59.174 37.500 0.00 0.00 0.00 2.52
1274 1425 4.989279 TTGCTTCACTTGCTTCTTCTTT 57.011 36.364 0.00 0.00 0.00 2.52
1275 1426 4.989279 TGCTTCACTTGCTTCTTCTTTT 57.011 36.364 0.00 0.00 0.00 2.27
1276 1427 5.329035 TGCTTCACTTGCTTCTTCTTTTT 57.671 34.783 0.00 0.00 0.00 1.94
1277 1428 5.104374 TGCTTCACTTGCTTCTTCTTTTTG 58.896 37.500 0.00 0.00 0.00 2.44
1278 1429 5.105063 GCTTCACTTGCTTCTTCTTTTTGT 58.895 37.500 0.00 0.00 0.00 2.83
1279 1430 5.005107 GCTTCACTTGCTTCTTCTTTTTGTG 59.995 40.000 0.00 0.00 0.00 3.33
1280 1431 5.643379 TCACTTGCTTCTTCTTTTTGTGT 57.357 34.783 0.00 0.00 0.00 3.72
1281 1432 5.401550 TCACTTGCTTCTTCTTTTTGTGTG 58.598 37.500 0.00 0.00 0.00 3.82
1282 1433 5.048083 TCACTTGCTTCTTCTTTTTGTGTGT 60.048 36.000 0.00 0.00 0.00 3.72
1320 1471 4.604843 TTTGCTCTTGAATGCGACATAG 57.395 40.909 0.00 0.00 0.00 2.23
1347 1498 1.066430 GGTTCACCTGTCGCCTTGATA 60.066 52.381 0.00 0.00 0.00 2.15
1391 1542 8.686334 TCTGAATTATTCTTGGTTTAATGCTCC 58.314 33.333 6.50 0.00 0.00 4.70
1441 1592 8.534778 CGAAAGAGAAAAGGAAAACTTGATTTG 58.465 33.333 0.00 0.00 39.96 2.32
1749 1902 7.462109 TGTTGCAAGTTTTGTAAATGTCATC 57.538 32.000 0.00 0.00 37.01 2.92
1856 2009 7.138736 TGCCTTGTCTTCTTTCTTTTTAATCG 58.861 34.615 0.00 0.00 0.00 3.34
2077 2231 9.307121 CAGTACCTTCTAACTCTGAATTATGTG 57.693 37.037 0.00 0.00 0.00 3.21
2078 2232 9.036980 AGTACCTTCTAACTCTGAATTATGTGT 57.963 33.333 0.00 0.00 0.00 3.72
2123 2278 5.574055 CGGAATCCTCATTGTTTGTTTCATG 59.426 40.000 0.00 0.00 0.00 3.07
2172 2329 8.556213 TTGACATTATTATTATAGCCCCGTTC 57.444 34.615 0.00 0.00 0.00 3.95
2318 2475 0.185901 ACTTTGAGGGCTTTGCTCCA 59.814 50.000 0.00 0.00 0.00 3.86
2377 2534 3.745975 TCTGTATTTTGCCAGTGACTTCG 59.254 43.478 0.00 0.00 0.00 3.79
2508 2859 8.181573 TGATGCTGGAAAGTTAAATCGTTATTC 58.818 33.333 0.00 0.00 0.00 1.75
2615 2966 8.248945 CAGAAAACCAGAGCTTTATGAATCATT 58.751 33.333 0.00 0.00 0.00 2.57
2638 3180 2.683211 AGGATGCCACTGTTTCCTTT 57.317 45.000 0.00 0.00 34.98 3.11
2639 3181 2.962859 AGGATGCCACTGTTTCCTTTT 58.037 42.857 0.00 0.00 34.98 2.27
2640 3182 3.308401 AGGATGCCACTGTTTCCTTTTT 58.692 40.909 0.00 0.00 34.98 1.94
2641 3183 3.321968 AGGATGCCACTGTTTCCTTTTTC 59.678 43.478 0.00 0.00 34.98 2.29
2698 3240 2.038952 ACTGCACCTGAAGCACTCATAA 59.961 45.455 0.00 0.00 37.02 1.90
2834 4816 8.208718 TCAACGAACTTGATAATATCCCTTTG 57.791 34.615 0.00 0.00 33.65 2.77
2899 4881 4.157656 TCAACCTGTCAAAACTCCAAACTG 59.842 41.667 0.00 0.00 0.00 3.16
2967 4949 0.595095 CAAGCAACTTCCACCAGAGC 59.405 55.000 0.00 0.00 0.00 4.09
3036 5018 2.798976 TGTTGGCAGCTGTCATTTTC 57.201 45.000 23.89 13.25 0.00 2.29
3050 5034 8.203485 AGCTGTCATTTTCTAAAACAATTTCCA 58.797 29.630 0.00 0.00 0.00 3.53
3056 5040 5.776173 TTCTAAAACAATTTCCAAGCGGA 57.224 34.783 0.00 0.00 40.60 5.54
3133 5117 3.433615 GTGATGATCCTAATAAGCCGTGC 59.566 47.826 0.00 0.00 0.00 5.34
3140 5124 5.748670 TCCTAATAAGCCGTGCCATATTA 57.251 39.130 9.36 9.36 0.00 0.98
3328 5312 5.080337 AGTGAGACGGTCATGTATCCATAT 58.920 41.667 11.27 0.00 37.56 1.78
3491 5487 2.787994 CACTTCTCCCATTCTGCTTGT 58.212 47.619 0.00 0.00 0.00 3.16
3494 5490 3.073650 ACTTCTCCCATTCTGCTTGTCTT 59.926 43.478 0.00 0.00 0.00 3.01
3516 5512 7.487189 GTCTTCAAGATTGCCATTATTGTCTTG 59.513 37.037 6.59 6.59 42.22 3.02
3602 5598 3.302365 GCAAAGTGGCTGCTGAAATAA 57.698 42.857 0.00 0.00 36.84 1.40
3607 5603 5.824904 AAGTGGCTGCTGAAATAATAGTG 57.175 39.130 0.00 0.00 0.00 2.74
3608 5604 3.629398 AGTGGCTGCTGAAATAATAGTGC 59.371 43.478 0.00 0.00 0.00 4.40
3610 5606 2.951642 GGCTGCTGAAATAATAGTGCCA 59.048 45.455 0.00 0.00 36.45 4.92
3611 5607 3.571401 GGCTGCTGAAATAATAGTGCCAT 59.429 43.478 0.00 0.00 36.45 4.40
3612 5608 4.543692 GCTGCTGAAATAATAGTGCCATG 58.456 43.478 0.00 0.00 0.00 3.66
3613 5609 4.558095 GCTGCTGAAATAATAGTGCCATGG 60.558 45.833 7.63 7.63 0.00 3.66
3614 5610 4.535781 TGCTGAAATAATAGTGCCATGGT 58.464 39.130 14.67 0.00 0.00 3.55
3615 5611 4.338964 TGCTGAAATAATAGTGCCATGGTG 59.661 41.667 14.67 0.00 0.00 4.17
3616 5612 4.794003 GCTGAAATAATAGTGCCATGGTGC 60.794 45.833 14.67 6.59 0.00 5.01
3617 5613 3.636300 TGAAATAATAGTGCCATGGTGCC 59.364 43.478 14.67 1.25 0.00 5.01
3618 5614 3.600448 AATAATAGTGCCATGGTGCCT 57.400 42.857 14.67 9.23 0.00 4.75
3628 5624 2.388735 CCATGGTGCCTGAGTACTAGA 58.611 52.381 2.57 0.00 0.00 2.43
3633 5629 1.825474 GTGCCTGAGTACTAGAGCCAA 59.175 52.381 0.00 0.00 0.00 4.52
3697 5693 3.508744 ACTTTGTTGCCAACTCTGTTG 57.491 42.857 9.30 3.69 0.00 3.33
3706 5702 1.135859 CCAACTCTGTTGCTCGAATGC 60.136 52.381 5.04 0.00 0.00 3.56
3727 5723 2.598589 CAACATTCTGATTTGTGCCCG 58.401 47.619 0.00 0.00 0.00 6.13
3741 5737 0.312416 TGCCCGAACATTTTGAACGG 59.688 50.000 0.00 0.00 38.45 4.44
3799 5795 4.023536 GCAACTTGGACTTTCACGGAATTA 60.024 41.667 0.00 0.00 0.00 1.40
3807 5803 5.123979 GGACTTTCACGGAATTATTTCAGCT 59.876 40.000 0.20 0.00 33.23 4.24
3817 5813 5.236695 GGAATTATTTCAGCTCGGTTACTCC 59.763 44.000 0.00 0.00 33.23 3.85
3915 5911 9.125026 ACTCACTCAAGAACTATGACAATTTTT 57.875 29.630 0.00 0.00 0.00 1.94
3984 5982 0.889994 TTCTGCAAAGGCGCATGATT 59.110 45.000 10.83 0.00 45.35 2.57
4080 6078 1.178276 CTGTTCTACTCAGGAGCCGT 58.822 55.000 0.00 0.00 0.00 5.68
4173 6171 9.625747 ACTACTTACTTATGAACTACTACCTCC 57.374 37.037 0.00 0.00 0.00 4.30
4174 6172 7.565323 ACTTACTTATGAACTACTACCTCCG 57.435 40.000 0.00 0.00 0.00 4.63
4175 6173 7.115414 ACTTACTTATGAACTACTACCTCCGT 58.885 38.462 0.00 0.00 0.00 4.69
4176 6174 7.613411 ACTTACTTATGAACTACTACCTCCGTT 59.387 37.037 0.00 0.00 0.00 4.44
4177 6175 6.448207 ACTTATGAACTACTACCTCCGTTC 57.552 41.667 0.00 0.00 37.02 3.95
4178 6176 5.359292 ACTTATGAACTACTACCTCCGTTCC 59.641 44.000 0.00 0.00 35.97 3.62
4179 6177 3.446442 TGAACTACTACCTCCGTTCCT 57.554 47.619 0.00 0.00 35.97 3.36
4180 6178 4.574674 TGAACTACTACCTCCGTTCCTA 57.425 45.455 0.00 0.00 35.97 2.94
4181 6179 4.922206 TGAACTACTACCTCCGTTCCTAA 58.078 43.478 0.00 0.00 35.97 2.69
4182 6180 5.324409 TGAACTACTACCTCCGTTCCTAAA 58.676 41.667 0.00 0.00 35.97 1.85
4183 6181 5.954150 TGAACTACTACCTCCGTTCCTAAAT 59.046 40.000 0.00 0.00 35.97 1.40
4184 6182 7.118723 TGAACTACTACCTCCGTTCCTAAATA 58.881 38.462 0.00 0.00 35.97 1.40
4185 6183 7.781693 TGAACTACTACCTCCGTTCCTAAATAT 59.218 37.037 0.00 0.00 35.97 1.28
4186 6184 9.289782 GAACTACTACCTCCGTTCCTAAATATA 57.710 37.037 0.00 0.00 31.89 0.86
4187 6185 9.646522 AACTACTACCTCCGTTCCTAAATATAA 57.353 33.333 0.00 0.00 0.00 0.98
4188 6186 9.294614 ACTACTACCTCCGTTCCTAAATATAAG 57.705 37.037 0.00 0.00 0.00 1.73
4189 6187 9.294614 CTACTACCTCCGTTCCTAAATATAAGT 57.705 37.037 0.00 0.00 0.00 2.24
4190 6188 8.175925 ACTACCTCCGTTCCTAAATATAAGTC 57.824 38.462 0.00 0.00 0.00 3.01
4191 6189 8.003629 ACTACCTCCGTTCCTAAATATAAGTCT 58.996 37.037 0.00 0.00 0.00 3.24
4192 6190 7.672122 ACCTCCGTTCCTAAATATAAGTCTT 57.328 36.000 0.00 0.00 0.00 3.01
4193 6191 8.087303 ACCTCCGTTCCTAAATATAAGTCTTT 57.913 34.615 0.00 0.00 0.00 2.52
4194 6192 8.546322 ACCTCCGTTCCTAAATATAAGTCTTTT 58.454 33.333 0.00 0.00 0.00 2.27
4195 6193 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
4221 6219 8.912787 AGAGATTTCACTACAAACTACATACG 57.087 34.615 0.00 0.00 0.00 3.06
4222 6220 7.974501 AGAGATTTCACTACAAACTACATACGG 59.025 37.037 0.00 0.00 0.00 4.02
4223 6221 7.833786 AGATTTCACTACAAACTACATACGGA 58.166 34.615 0.00 0.00 0.00 4.69
4224 6222 8.475639 AGATTTCACTACAAACTACATACGGAT 58.524 33.333 0.00 0.00 0.00 4.18
4225 6223 9.740239 GATTTCACTACAAACTACATACGGATA 57.260 33.333 0.00 0.00 0.00 2.59
4267 6265 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
4268 6266 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
4269 6267 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
4270 6268 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
4271 6269 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
4272 6270 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
4273 6271 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
4274 6272 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
4275 6273 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
4276 6274 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
4277 6275 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
4278 6276 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
4279 6277 4.439057 TCATTTTGCTCCGTATGTAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
4280 6278 3.965379 TTTTGCTCCGTATGTAGTCCA 57.035 42.857 0.00 0.00 0.00 4.02
4281 6279 4.481368 TTTTGCTCCGTATGTAGTCCAT 57.519 40.909 0.00 0.00 37.58 3.41
4282 6280 5.601583 TTTTGCTCCGTATGTAGTCCATA 57.398 39.130 0.00 0.00 34.86 2.74
4283 6281 4.848562 TTGCTCCGTATGTAGTCCATAG 57.151 45.455 0.00 0.00 36.71 2.23
4284 6282 3.828921 TGCTCCGTATGTAGTCCATAGT 58.171 45.455 0.00 0.00 36.71 2.12
4285 6283 3.568430 TGCTCCGTATGTAGTCCATAGTG 59.432 47.826 0.00 0.00 36.71 2.74
4286 6284 3.057456 GCTCCGTATGTAGTCCATAGTGG 60.057 52.174 0.00 0.00 36.71 4.00
4287 6285 4.395625 CTCCGTATGTAGTCCATAGTGGA 58.604 47.826 0.00 0.00 45.98 4.02
4302 6300 8.380742 TCCATAGTGGAATCTCTAAAAAGACT 57.619 34.615 0.00 0.00 45.00 3.24
4303 6301 8.826765 TCCATAGTGGAATCTCTAAAAAGACTT 58.173 33.333 0.00 0.00 45.00 3.01
4315 6313 9.490379 TCTCTAAAAAGACTTACATTCAGGAAC 57.510 33.333 0.00 0.00 0.00 3.62
4316 6314 8.306680 TCTAAAAAGACTTACATTCAGGAACG 57.693 34.615 0.00 0.00 0.00 3.95
4317 6315 5.941948 AAAAGACTTACATTCAGGAACGG 57.058 39.130 0.00 0.00 0.00 4.44
4318 6316 4.884668 AAGACTTACATTCAGGAACGGA 57.115 40.909 0.00 0.00 0.00 4.69
4319 6317 4.457834 AGACTTACATTCAGGAACGGAG 57.542 45.455 0.00 0.00 31.97 4.63
4320 6318 3.195825 AGACTTACATTCAGGAACGGAGG 59.804 47.826 0.00 0.00 31.97 4.30
4321 6319 2.236395 ACTTACATTCAGGAACGGAGGG 59.764 50.000 0.00 0.00 31.97 4.30
4322 6320 2.241281 TACATTCAGGAACGGAGGGA 57.759 50.000 0.00 0.00 31.97 4.20
4323 6321 0.905357 ACATTCAGGAACGGAGGGAG 59.095 55.000 0.00 0.00 31.97 4.30
4329 6327 3.985127 TCAGGAACGGAGGGAGTATTTA 58.015 45.455 0.00 0.00 0.00 1.40
4441 6446 3.090037 AGAAGCTGACCTAGTTTAGCGA 58.910 45.455 0.00 0.00 40.92 4.93
4471 6476 7.232994 AGCTATACGATACGAAACGTCTATTC 58.767 38.462 0.00 0.00 41.54 1.75
4472 6477 7.117523 AGCTATACGATACGAAACGTCTATTCT 59.882 37.037 0.00 3.41 41.54 2.40
4633 6640 0.459585 TCGCGTATCAAAGGCAGACC 60.460 55.000 5.77 0.00 38.96 3.85
4634 6641 0.739462 CGCGTATCAAAGGCAGACCA 60.739 55.000 0.00 0.00 38.96 4.02
4635 6642 1.448985 GCGTATCAAAGGCAGACCAA 58.551 50.000 0.00 0.00 38.86 3.67
4695 6702 7.914871 TGTGTTTGATAAAATGATTCTATGCCG 59.085 33.333 0.00 0.00 0.00 5.69
4717 6724 5.125417 CCGACCTACATGTGGAATTTCAATT 59.875 40.000 11.31 0.00 0.00 2.32
4815 6822 2.108250 TCCAAAGGGAGGAAAAGTGAGG 59.892 50.000 0.00 0.00 38.64 3.86
4829 6836 1.886542 AGTGAGGTGGAAAAATTCGCC 59.113 47.619 0.00 0.00 0.00 5.54
4847 6854 2.011947 GCCGGTGGACTTTATACAACC 58.988 52.381 1.90 0.00 0.00 3.77
4881 6888 8.136165 AGGTACTGATATAAGAACTTTGCTACG 58.864 37.037 0.00 0.00 37.18 3.51
4913 6920 9.490379 CTTTCTTAAAGCTGTCCTAGTAAGAAA 57.510 33.333 14.75 14.75 41.75 2.52
4960 6967 1.080569 CATTCCAAACACTGGCCGC 60.081 57.895 0.00 0.00 45.98 6.53
5222 7234 9.734620 AATGACAATGACGGTTTTCATATATTG 57.265 29.630 0.00 0.00 35.02 1.90
5276 7289 8.755696 TTGCTGGTTGATGTAAATTATTTGAC 57.244 30.769 0.00 0.00 0.00 3.18
5453 7468 0.389817 GAGCGTGGTGTGAGCATGTA 60.390 55.000 0.00 0.00 35.22 2.29
5852 7868 1.408702 GTCACACAACTTGCAATGGGT 59.591 47.619 2.00 2.00 32.16 4.51
6009 8034 2.489255 CCGAGGAATAGGGCTCTGTAGA 60.489 54.545 0.00 0.00 0.00 2.59
6010 8035 2.554893 CGAGGAATAGGGCTCTGTAGAC 59.445 54.545 0.00 0.00 0.00 2.59
6011 8036 3.749310 CGAGGAATAGGGCTCTGTAGACT 60.749 52.174 0.00 0.00 0.00 3.24
6012 8037 3.571590 AGGAATAGGGCTCTGTAGACTG 58.428 50.000 0.00 0.00 0.00 3.51
6013 8038 3.052490 AGGAATAGGGCTCTGTAGACTGT 60.052 47.826 0.00 0.00 0.00 3.55
6014 8039 4.168283 AGGAATAGGGCTCTGTAGACTGTA 59.832 45.833 0.00 0.00 0.00 2.74
6015 8040 4.521256 GGAATAGGGCTCTGTAGACTGTAG 59.479 50.000 0.00 0.00 0.00 2.74
6051 8076 2.514458 ATTTCCCGCTTTGAGTCCAT 57.486 45.000 0.00 0.00 0.00 3.41
6089 8114 1.006571 GCACGTCGGAGAGTTGGAA 60.007 57.895 0.00 0.00 36.95 3.53
6189 8215 2.027605 CGGTCCATGATCCCGTCG 59.972 66.667 0.00 0.00 37.00 5.12
6307 8340 2.971598 AAGTCCGGCCATCACCCAG 61.972 63.158 2.24 0.00 0.00 4.45
6332 8365 1.082104 GGTCGTGGAAGCGCAAAAG 60.082 57.895 11.47 0.00 0.00 2.27
6349 8382 4.455606 CAAAAGAACTGTCTGGTCTCCTT 58.544 43.478 0.00 0.00 42.96 3.36
6353 8386 2.390225 ACTGTCTGGTCTCCTTGTCT 57.610 50.000 0.00 0.00 0.00 3.41
6359 8392 0.545309 TGGTCTCCTTGTCTCTGGGG 60.545 60.000 0.00 0.00 0.00 4.96
6363 8396 0.617249 CTCCTTGTCTCTGGGGAGCT 60.617 60.000 0.00 0.00 38.82 4.09
6365 8398 1.078567 CTTGTCTCTGGGGAGCTGC 60.079 63.158 0.00 0.00 39.31 5.25
6372 8405 2.611800 TGGGGAGCTGCAGGTGAT 60.612 61.111 25.60 0.00 0.00 3.06
6388 8421 1.071471 GATTCCATGGGCGATCGGT 59.929 57.895 18.30 0.00 0.00 4.69
6392 8425 0.830023 TCCATGGGCGATCGGTATCA 60.830 55.000 18.30 0.00 31.93 2.15
6403 8436 1.078497 CGGTATCAGTGGCCTGCAA 60.078 57.895 3.32 0.00 38.66 4.08
6407 8440 0.625316 TATCAGTGGCCTGCAACCAT 59.375 50.000 11.09 0.00 39.95 3.55
6413 8446 2.123428 GGCCTGCAACCATAGCCAG 61.123 63.158 0.00 0.00 39.11 4.85
6451 8484 7.024171 GCTACTTTCTTTCAAAAGTATCCTGC 58.976 38.462 9.06 6.32 45.71 4.85
6527 8561 4.231273 TGCTGGTATACATCTGGGTGTAT 58.769 43.478 10.73 10.73 44.92 2.29
6582 10152 9.570488 GTAATTAACTAGACAGTTCTGTGTAGG 57.430 37.037 28.10 16.83 44.04 3.18
6583 10153 8.418597 AATTAACTAGACAGTTCTGTGTAGGA 57.581 34.615 28.10 18.57 44.04 2.94
6589 10159 0.244994 AGTTCTGTGTAGGAGCAGCG 59.755 55.000 0.00 0.00 33.09 5.18
6632 10225 6.975196 TTCCCATCAAGTTGAGAATTTTGA 57.025 33.333 11.91 0.00 34.42 2.69
6701 10296 9.567776 CAATAATGTGGGGTGTTCTATATGTTA 57.432 33.333 0.00 0.00 0.00 2.41
6729 10325 9.632638 AGGAAAATGTATTGCATTGTACTATCT 57.367 29.630 0.79 0.00 42.74 1.98
6730 10326 9.884465 GGAAAATGTATTGCATTGTACTATCTC 57.116 33.333 0.48 0.00 46.29 2.75
6733 10329 9.618890 AAATGTATTGCATTGTACTATCTCTGT 57.381 29.630 0.48 0.00 46.29 3.41
6734 10330 9.618890 AATGTATTGCATTGTACTATCTCTGTT 57.381 29.630 0.00 0.00 45.35 3.16
6735 10331 8.648557 TGTATTGCATTGTACTATCTCTGTTC 57.351 34.615 0.00 0.00 0.00 3.18
6736 10332 8.257306 TGTATTGCATTGTACTATCTCTGTTCA 58.743 33.333 0.00 0.00 0.00 3.18
6737 10333 9.265901 GTATTGCATTGTACTATCTCTGTTCAT 57.734 33.333 0.00 0.00 0.00 2.57
6739 10335 9.836864 ATTGCATTGTACTATCTCTGTTCATAA 57.163 29.630 0.00 0.00 0.00 1.90
6740 10336 9.665719 TTGCATTGTACTATCTCTGTTCATAAA 57.334 29.630 0.00 0.00 0.00 1.40
6741 10337 9.836864 TGCATTGTACTATCTCTGTTCATAAAT 57.163 29.630 0.00 0.00 0.00 1.40
6758 10354 9.577003 GTTCATAAATATAAGACGTTTTAGCGG 57.423 33.333 4.75 0.00 35.98 5.52
6759 10355 8.876275 TCATAAATATAAGACGTTTTAGCGGT 57.124 30.769 4.75 0.00 35.98 5.68
6760 10356 9.964303 TCATAAATATAAGACGTTTTAGCGGTA 57.036 29.630 4.75 0.00 35.98 4.02
6767 10363 6.823678 AAGACGTTTTAGCGGTATAGATTG 57.176 37.500 0.00 0.00 35.98 2.67
6768 10364 6.140303 AGACGTTTTAGCGGTATAGATTGA 57.860 37.500 0.00 0.00 35.98 2.57
6769 10365 6.567050 AGACGTTTTAGCGGTATAGATTGAA 58.433 36.000 0.00 0.00 35.98 2.69
6770 10366 6.474751 AGACGTTTTAGCGGTATAGATTGAAC 59.525 38.462 0.00 0.00 35.98 3.18
6771 10367 6.335777 ACGTTTTAGCGGTATAGATTGAACT 58.664 36.000 0.00 0.00 35.98 3.01
6772 10368 6.255020 ACGTTTTAGCGGTATAGATTGAACTG 59.745 38.462 0.00 0.00 35.98 3.16
6773 10369 6.419771 GTTTTAGCGGTATAGATTGAACTGC 58.580 40.000 0.00 0.00 44.19 4.40
6774 10370 3.113260 AGCGGTATAGATTGAACTGCC 57.887 47.619 2.07 0.00 44.80 4.85
6775 10371 2.434336 AGCGGTATAGATTGAACTGCCA 59.566 45.455 2.07 0.00 44.80 4.92
6776 10372 3.118408 AGCGGTATAGATTGAACTGCCAA 60.118 43.478 2.07 0.00 44.80 4.52
6777 10373 3.625764 GCGGTATAGATTGAACTGCCAAA 59.374 43.478 0.00 0.00 39.17 3.28
6778 10374 4.095782 GCGGTATAGATTGAACTGCCAAAA 59.904 41.667 0.00 0.00 39.17 2.44
6779 10375 5.569413 CGGTATAGATTGAACTGCCAAAAC 58.431 41.667 0.00 0.00 0.00 2.43
6780 10376 5.569413 GGTATAGATTGAACTGCCAAAACG 58.431 41.667 0.00 0.00 0.00 3.60
6781 10377 5.123344 GGTATAGATTGAACTGCCAAAACGT 59.877 40.000 0.00 0.00 0.00 3.99
6782 10378 3.626028 AGATTGAACTGCCAAAACGTC 57.374 42.857 0.00 0.00 0.00 4.34
6783 10379 2.948979 AGATTGAACTGCCAAAACGTCA 59.051 40.909 0.00 0.00 0.00 4.35
6784 10380 3.569701 AGATTGAACTGCCAAAACGTCAT 59.430 39.130 0.00 0.00 0.00 3.06
6785 10381 4.759693 AGATTGAACTGCCAAAACGTCATA 59.240 37.500 0.00 0.00 0.00 2.15
6786 10382 5.415701 AGATTGAACTGCCAAAACGTCATAT 59.584 36.000 0.00 0.00 0.00 1.78
6787 10383 6.597672 AGATTGAACTGCCAAAACGTCATATA 59.402 34.615 0.00 0.00 0.00 0.86
6788 10384 6.751514 TTGAACTGCCAAAACGTCATATAT 57.248 33.333 0.00 0.00 0.00 0.86
6789 10385 6.751514 TGAACTGCCAAAACGTCATATATT 57.248 33.333 0.00 0.00 0.00 1.28
6790 10386 7.151999 TGAACTGCCAAAACGTCATATATTT 57.848 32.000 0.00 0.00 0.00 1.40
6791 10387 8.270080 TGAACTGCCAAAACGTCATATATTTA 57.730 30.769 0.00 0.00 0.00 1.40
6792 10388 8.394877 TGAACTGCCAAAACGTCATATATTTAG 58.605 33.333 0.00 0.00 0.00 1.85
6793 10389 8.500753 AACTGCCAAAACGTCATATATTTAGA 57.499 30.769 0.00 0.00 0.00 2.10
6794 10390 8.500753 ACTGCCAAAACGTCATATATTTAGAA 57.499 30.769 0.00 0.00 0.00 2.10
6795 10391 8.952278 ACTGCCAAAACGTCATATATTTAGAAA 58.048 29.630 0.00 0.00 0.00 2.52
6796 10392 9.221775 CTGCCAAAACGTCATATATTTAGAAAC 57.778 33.333 0.00 0.00 0.00 2.78
6797 10393 7.906010 TGCCAAAACGTCATATATTTAGAAACG 59.094 33.333 0.00 0.00 35.00 3.60
6798 10394 7.375017 GCCAAAACGTCATATATTTAGAAACGG 59.625 37.037 0.00 0.00 33.26 4.44
6799 10395 8.605746 CCAAAACGTCATATATTTAGAAACGGA 58.394 33.333 0.00 0.00 33.26 4.69
6800 10396 9.632969 CAAAACGTCATATATTTAGAAACGGAG 57.367 33.333 0.00 0.00 33.26 4.63
6801 10397 7.941795 AACGTCATATATTTAGAAACGGAGG 57.058 36.000 0.00 0.00 33.26 4.30
6802 10398 6.453092 ACGTCATATATTTAGAAACGGAGGG 58.547 40.000 0.00 0.00 33.26 4.30
6803 10399 6.266103 ACGTCATATATTTAGAAACGGAGGGA 59.734 38.462 0.00 0.00 33.26 4.20
6804 10400 6.807230 CGTCATATATTTAGAAACGGAGGGAG 59.193 42.308 0.00 0.00 0.00 4.30
6805 10401 7.523380 CGTCATATATTTAGAAACGGAGGGAGT 60.523 40.741 0.00 0.00 0.00 3.85
6806 10402 8.800332 GTCATATATTTAGAAACGGAGGGAGTA 58.200 37.037 0.00 0.00 0.00 2.59
6807 10403 8.800332 TCATATATTTAGAAACGGAGGGAGTAC 58.200 37.037 0.00 0.00 0.00 2.73
6811 10407 3.611766 AGAAACGGAGGGAGTACATTG 57.388 47.619 0.00 0.00 0.00 2.82
6817 10413 2.161609 CGGAGGGAGTACATTGTTTTGC 59.838 50.000 0.00 0.00 0.00 3.68
6834 10430 5.184864 TGTTTTGCGTCTGAAATATCCCATT 59.815 36.000 0.00 0.00 0.00 3.16
6840 10436 6.770303 TGCGTCTGAAATATCCCATTTGAATA 59.230 34.615 0.00 0.00 0.00 1.75
6882 10483 8.997323 GTTCAGATATCTAATATGCAGCACTTT 58.003 33.333 4.54 0.00 0.00 2.66
7006 10610 2.329267 TCCATTAGAGGATGCGGACAT 58.671 47.619 0.00 0.00 39.98 3.06
7049 10653 4.212911 GCGAGACGATTGTATACACTCTC 58.787 47.826 17.97 15.75 0.00 3.20
7051 10655 5.436410 CGAGACGATTGTATACACTCTCAG 58.564 45.833 17.97 7.92 0.00 3.35
7085 10689 1.742880 TGCAGACTTGGATGCTCGC 60.743 57.895 0.00 0.00 42.98 5.03
7095 10699 0.100682 GGATGCTCGCGAGAACTACA 59.899 55.000 38.74 25.73 41.32 2.74
7110 10714 5.552178 AGAACTACACTCCTGAATGGAAAC 58.448 41.667 0.00 0.00 45.63 2.78
7187 10791 0.825840 TGGCAAACAAGCAGGTACCC 60.826 55.000 8.74 0.00 35.83 3.69
7191 10820 0.475044 AAACAAGCAGGTACCCGGAA 59.525 50.000 8.74 0.00 0.00 4.30
7205 10834 1.402968 CCCGGAATTGTCAGCATTCAG 59.597 52.381 0.73 0.00 0.00 3.02
7206 10835 2.086869 CCGGAATTGTCAGCATTCAGT 58.913 47.619 0.00 0.00 0.00 3.41
7258 10887 5.050644 TCTCATCTTGTCGCGTTTAACTA 57.949 39.130 5.77 0.00 0.00 2.24
7263 10892 3.976942 TCTTGTCGCGTTTAACTAGTCAC 59.023 43.478 5.77 0.00 0.00 3.67
7301 10930 3.413327 TCTGCGGGTAATTTAAGCACAA 58.587 40.909 0.00 0.00 33.92 3.33
7326 10957 1.092921 TGTCTTTTCAGGTGCGCGTT 61.093 50.000 8.43 0.00 0.00 4.84
7387 11018 3.405170 CCGATTTGGTTGAGCATGTAC 57.595 47.619 0.00 0.00 0.00 2.90
7389 11020 3.190327 CCGATTTGGTTGAGCATGTACAA 59.810 43.478 0.00 0.00 0.00 2.41
7395 11026 4.709250 TGGTTGAGCATGTACAAGTGTTA 58.291 39.130 0.00 0.00 0.00 2.41
7402 11033 6.071051 TGAGCATGTACAAGTGTTACTGGATA 60.071 38.462 0.00 0.00 0.00 2.59
7492 11123 0.445436 GGACGAATTCACAGCAGCTG 59.555 55.000 21.54 21.54 37.52 4.24
7513 11144 4.005650 TGTGAATGACAAGAAGCTGATCC 58.994 43.478 0.00 0.00 0.00 3.36
7560 11191 2.016096 GCTGAAGGCCTTCTCCACATC 61.016 57.143 38.38 17.28 40.14 3.06
7594 11225 4.941263 TGCATCGTTGTAAATAGGCTTTCT 59.059 37.500 0.00 0.00 0.00 2.52
7713 11344 2.014335 TGTGTGCTCCATTCGATCAG 57.986 50.000 0.00 0.00 0.00 2.90
7767 11402 7.936496 TTTCCTAATATTTCAGTGCATGTGA 57.064 32.000 0.00 0.00 0.00 3.58
7781 11416 3.000727 GCATGTGAGCTACGTTTTAGGT 58.999 45.455 0.00 0.00 0.00 3.08
7803 11438 3.706802 TTTTGTTTTGCTGATGCTCGA 57.293 38.095 0.00 0.00 40.48 4.04
7816 11451 0.388294 TGCTCGAGGCTCTGATCATG 59.612 55.000 15.58 1.70 42.39 3.07
7817 11452 0.388659 GCTCGAGGCTCTGATCATGT 59.611 55.000 15.58 0.00 38.06 3.21
7818 11453 1.202510 GCTCGAGGCTCTGATCATGTT 60.203 52.381 15.58 0.00 38.06 2.71
7819 11454 2.741228 GCTCGAGGCTCTGATCATGTTT 60.741 50.000 15.58 0.00 38.06 2.83
7820 11455 3.529533 CTCGAGGCTCTGATCATGTTTT 58.470 45.455 13.50 0.00 0.00 2.43
7821 11456 3.937706 CTCGAGGCTCTGATCATGTTTTT 59.062 43.478 13.50 0.00 0.00 1.94
7843 11478 3.753294 TTTTTGAGAAGACGAGGCTCT 57.247 42.857 13.50 0.00 0.00 4.09
7844 11479 2.732412 TTTGAGAAGACGAGGCTCTG 57.268 50.000 13.50 8.77 0.00 3.35
7845 11480 1.911057 TTGAGAAGACGAGGCTCTGA 58.089 50.000 13.50 0.00 0.00 3.27
7846 11481 2.136298 TGAGAAGACGAGGCTCTGAT 57.864 50.000 13.50 0.00 0.00 2.90
7847 11482 2.020720 TGAGAAGACGAGGCTCTGATC 58.979 52.381 13.50 7.50 0.00 2.92
7848 11483 2.020720 GAGAAGACGAGGCTCTGATCA 58.979 52.381 13.50 0.00 0.00 2.92
7849 11484 2.622942 GAGAAGACGAGGCTCTGATCAT 59.377 50.000 13.50 0.43 0.00 2.45
7850 11485 2.361757 AGAAGACGAGGCTCTGATCATG 59.638 50.000 13.50 0.00 0.00 3.07
7853 11488 1.135915 GACGAGGCTCTGATCATGTGT 59.864 52.381 13.50 0.00 0.00 3.72
7920 11555 2.034221 GGAAAGCCCGCCAAGACT 59.966 61.111 0.00 0.00 0.00 3.24
7970 11612 0.321653 AATCTTCTCCGTGTGTGCCC 60.322 55.000 0.00 0.00 0.00 5.36
8089 11741 3.120338 ACACACGCACACATATTTAGCAC 60.120 43.478 0.00 0.00 0.00 4.40
8140 11797 3.414700 CTTCGCCGCGCTGTTCTT 61.415 61.111 8.21 0.00 0.00 2.52
8141 11798 3.354499 CTTCGCCGCGCTGTTCTTC 62.354 63.158 8.21 0.00 0.00 2.87
8148 11805 2.342279 CGCTGTTCTTCCCCGTGA 59.658 61.111 0.00 0.00 0.00 4.35
8169 11827 8.596380 CCGTGAGATTAACTCTTTTTCTATGTC 58.404 37.037 0.00 0.00 45.13 3.06
8171 11829 9.141400 GTGAGATTAACTCTTTTTCTATGTCGT 57.859 33.333 0.00 0.00 45.13 4.34
8224 11886 4.566004 TCTATATATCGTGTTTGCCTGCC 58.434 43.478 0.00 0.00 0.00 4.85
8227 11889 0.958382 TATCGTGTTTGCCTGCCACC 60.958 55.000 0.00 0.00 0.00 4.61
8234 11896 2.337879 TTTGCCTGCCACCGAAGACT 62.338 55.000 0.00 0.00 0.00 3.24
8249 11911 6.915300 CACCGAAGACTATATTGTTCTGAGAG 59.085 42.308 0.00 0.00 0.00 3.20
8274 11936 2.554032 AGTGAAGTTGTTAGGTGCATGC 59.446 45.455 11.82 11.82 0.00 4.06
8298 11960 2.762535 GGAGTCCTTCCATGTTTCGA 57.237 50.000 0.41 0.00 46.01 3.71
8303 11965 1.974957 TCCTTCCATGTTTCGACCTCA 59.025 47.619 0.00 0.00 0.00 3.86
8308 11970 1.800586 CCATGTTTCGACCTCAGTGTG 59.199 52.381 0.00 0.00 0.00 3.82
8354 12016 2.499214 GAGAGCTCTCATCCCACGT 58.501 57.895 33.99 1.30 42.42 4.49
8436 12098 2.484594 GGCTCAGCTCCCTATTTCACTC 60.485 54.545 0.00 0.00 0.00 3.51
8478 12140 1.143620 GCTCCACTGCTAGCTCAGG 59.856 63.158 17.23 14.16 38.36 3.86
8511 12174 9.551734 CCCGGCTATAGTACTTTTTACTTAAAT 57.448 33.333 0.00 0.00 0.00 1.40
8666 12332 9.478768 TCACAAACTTACTATATGTTCGTGAAA 57.521 29.630 6.12 0.00 37.05 2.69
8889 12576 9.802039 AATATTTCCCTAATAATAAACCAGCGA 57.198 29.630 0.00 0.00 32.63 4.93
8890 12577 9.975218 ATATTTCCCTAATAATAAACCAGCGAT 57.025 29.630 0.00 0.00 32.63 4.58
8891 12578 8.706322 ATTTCCCTAATAATAAACCAGCGATT 57.294 30.769 0.00 0.00 0.00 3.34
8892 12579 7.504924 TTCCCTAATAATAAACCAGCGATTG 57.495 36.000 0.00 0.00 0.00 2.67
8893 12580 5.472137 TCCCTAATAATAAACCAGCGATTGC 59.528 40.000 0.00 0.00 43.24 3.56
8904 12591 3.001576 GCGATTGCTTTTGGTCGTC 57.998 52.632 0.00 0.00 38.39 4.20
8905 12592 0.454452 GCGATTGCTTTTGGTCGTCC 60.454 55.000 0.00 0.00 38.39 4.79
8906 12593 0.179225 CGATTGCTTTTGGTCGTCCG 60.179 55.000 0.00 0.00 36.30 4.79
8907 12594 0.872388 GATTGCTTTTGGTCGTCCGT 59.128 50.000 0.00 0.00 36.30 4.69
8908 12595 0.872388 ATTGCTTTTGGTCGTCCGTC 59.128 50.000 0.00 0.00 36.30 4.79
8909 12596 0.462225 TTGCTTTTGGTCGTCCGTCA 60.462 50.000 0.00 0.00 36.30 4.35
8910 12597 0.250124 TGCTTTTGGTCGTCCGTCAT 60.250 50.000 0.00 0.00 36.30 3.06
8911 12598 0.442699 GCTTTTGGTCGTCCGTCATC 59.557 55.000 0.00 0.00 36.30 2.92
8912 12599 0.713883 CTTTTGGTCGTCCGTCATCG 59.286 55.000 0.00 0.00 36.30 3.84
8922 12609 4.433102 CGTCATCGGGCGTTTTTG 57.567 55.556 0.00 0.00 0.00 2.44
8923 12610 1.795962 CGTCATCGGGCGTTTTTGC 60.796 57.895 0.00 0.00 0.00 3.68
8924 12611 1.284408 GTCATCGGGCGTTTTTGCA 59.716 52.632 0.00 0.00 36.28 4.08
8925 12612 0.729140 GTCATCGGGCGTTTTTGCAG 60.729 55.000 0.00 0.00 36.28 4.41
8926 12613 0.886938 TCATCGGGCGTTTTTGCAGA 60.887 50.000 0.00 0.00 36.28 4.26
8927 12614 0.039617 CATCGGGCGTTTTTGCAGAA 60.040 50.000 0.00 0.00 36.28 3.02
8928 12615 0.671251 ATCGGGCGTTTTTGCAGAAA 59.329 45.000 0.00 0.00 36.28 2.52
8929 12616 0.456221 TCGGGCGTTTTTGCAGAAAA 59.544 45.000 3.66 3.63 36.28 2.29
8930 12617 0.852136 CGGGCGTTTTTGCAGAAAAG 59.148 50.000 10.61 10.61 32.62 2.27
8931 12618 1.801025 CGGGCGTTTTTGCAGAAAAGT 60.801 47.619 15.14 0.00 32.62 2.66
8932 12619 2.541999 CGGGCGTTTTTGCAGAAAAGTA 60.542 45.455 15.14 0.00 32.62 2.24
8933 12620 2.792674 GGGCGTTTTTGCAGAAAAGTAC 59.207 45.455 15.14 9.60 32.62 2.73
8934 12621 2.792674 GGCGTTTTTGCAGAAAAGTACC 59.207 45.455 15.14 6.93 32.62 3.34
8935 12622 2.792674 GCGTTTTTGCAGAAAAGTACCC 59.207 45.455 15.14 0.00 32.62 3.69
8936 12623 3.377439 CGTTTTTGCAGAAAAGTACCCC 58.623 45.455 3.66 0.00 32.62 4.95
8937 12624 3.724374 GTTTTTGCAGAAAAGTACCCCC 58.276 45.455 3.66 0.00 32.62 5.40
8938 12625 1.611519 TTTGCAGAAAAGTACCCCCG 58.388 50.000 0.00 0.00 0.00 5.73
8939 12626 0.475044 TTGCAGAAAAGTACCCCCGT 59.525 50.000 0.00 0.00 0.00 5.28
8940 12627 0.475044 TGCAGAAAAGTACCCCCGTT 59.525 50.000 0.00 0.00 0.00 4.44
8941 12628 1.133730 TGCAGAAAAGTACCCCCGTTT 60.134 47.619 0.00 0.00 0.00 3.60
8942 12629 1.538512 GCAGAAAAGTACCCCCGTTTC 59.461 52.381 0.00 0.00 34.38 2.78
8943 12630 2.812983 GCAGAAAAGTACCCCCGTTTCT 60.813 50.000 0.00 0.00 41.68 2.52
8944 12631 2.812011 CAGAAAAGTACCCCCGTTTCTG 59.188 50.000 12.67 12.67 46.57 3.02
8945 12632 2.707257 AGAAAAGTACCCCCGTTTCTGA 59.293 45.455 0.00 0.00 40.21 3.27
8946 12633 3.329814 AGAAAAGTACCCCCGTTTCTGAT 59.670 43.478 0.00 0.00 40.21 2.90
8947 12634 4.533311 AGAAAAGTACCCCCGTTTCTGATA 59.467 41.667 0.00 0.00 40.21 2.15
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
85 95 3.357203 AGACTCAAGAGACAATAGGCGA 58.643 45.455 3.73 0.00 0.00 5.54
145 155 7.489435 GTGGTGGAAAGAAAGAAAGAAAGAAAG 59.511 37.037 0.00 0.00 0.00 2.62
146 156 7.320399 GTGGTGGAAAGAAAGAAAGAAAGAAA 58.680 34.615 0.00 0.00 0.00 2.52
147 157 6.127451 GGTGGTGGAAAGAAAGAAAGAAAGAA 60.127 38.462 0.00 0.00 0.00 2.52
148 158 5.359860 GGTGGTGGAAAGAAAGAAAGAAAGA 59.640 40.000 0.00 0.00 0.00 2.52
340 377 6.456988 GCCAAGTAATTCGTACCTCAATCTTG 60.457 42.308 0.00 0.00 32.58 3.02
342 379 5.104900 AGCCAAGTAATTCGTACCTCAATCT 60.105 40.000 0.00 0.00 32.58 2.40
346 383 3.857052 CAGCCAAGTAATTCGTACCTCA 58.143 45.455 0.00 0.00 32.58 3.86
352 389 1.133025 GCATGCAGCCAAGTAATTCGT 59.867 47.619 14.21 0.00 37.23 3.85
405 442 0.035820 GGAATAGCACCGGTCCAACA 60.036 55.000 2.59 0.00 0.00 3.33
452 489 5.231147 TGAGTTCTTGCGCACAAATAAAAAC 59.769 36.000 11.12 5.97 34.74 2.43
459 496 1.202245 GGTTGAGTTCTTGCGCACAAA 60.202 47.619 11.12 4.18 34.74 2.83
462 499 1.082756 CGGTTGAGTTCTTGCGCAC 60.083 57.895 11.12 0.00 0.00 5.34
467 504 6.089417 GCCAAATTATTTCGGTTGAGTTCTTG 59.911 38.462 7.57 0.00 0.00 3.02
489 526 2.674357 GCGAAGAAAACCTAATACGCCA 59.326 45.455 0.00 0.00 39.13 5.69
523 560 5.069781 AGTCCAATTACTCTACATGCTCTCC 59.930 44.000 0.00 0.00 0.00 3.71
580 632 4.366586 ACTGATGAGTGATGATGTAAGCG 58.633 43.478 0.00 0.00 0.00 4.68
611 664 4.406003 CACCCCTATGCTTACTTCTGTAGT 59.594 45.833 0.00 0.00 41.04 2.73
618 704 1.222567 CCCCACCCCTATGCTTACTT 58.777 55.000 0.00 0.00 0.00 2.24
692 794 5.127682 AGAAAGATGACCAGTGCAAGTTTTT 59.872 36.000 0.00 0.00 0.00 1.94
706 808 6.869388 GGATAATACTCGGGAAGAAAGATGAC 59.131 42.308 0.00 0.00 0.00 3.06
707 809 6.782988 AGGATAATACTCGGGAAGAAAGATGA 59.217 38.462 0.00 0.00 0.00 2.92
708 810 6.998802 AGGATAATACTCGGGAAGAAAGATG 58.001 40.000 0.00 0.00 0.00 2.90
742 844 6.652900 AGAAACTATCTTGAAGGCTTCTTGAC 59.347 38.462 26.26 11.59 33.39 3.18
748 850 4.655963 TGCAGAAACTATCTTGAAGGCTT 58.344 39.130 0.00 0.00 35.73 4.35
775 877 7.329717 GCAGACTCAAAATATCCGTCCTAATAG 59.670 40.741 0.00 0.00 0.00 1.73
841 951 4.509970 TGACGGCGATTCGATTATGAAAAT 59.490 37.500 16.62 0.00 0.00 1.82
855 965 2.022195 AGTGTATGTAGTGACGGCGAT 58.978 47.619 16.62 0.00 0.00 4.58
990 1130 0.693622 TGAACGCCATCCCCAGTTTA 59.306 50.000 0.00 0.00 0.00 2.01
1093 1236 5.046878 TCACTTCTAAGCCCAAATCGACTTA 60.047 40.000 0.00 0.00 0.00 2.24
1111 1254 9.099454 CCCTATATTACACTTCACTTTCACTTC 57.901 37.037 0.00 0.00 0.00 3.01
1152 1299 1.125093 TGTCCGGGGCTTCTTTCAGA 61.125 55.000 0.00 0.00 0.00 3.27
1188 1338 7.127012 TCCACCATAACAGATATTAACGGAA 57.873 36.000 0.00 0.00 0.00 4.30
1246 1397 1.811359 AGCAAGTGAAGCAATCTCAGC 59.189 47.619 0.00 0.00 0.00 4.26
1256 1407 6.034256 CACACAAAAAGAAGAAGCAAGTGAAG 59.966 38.462 0.00 0.00 0.00 3.02
1268 1419 4.981674 ACACAACACACACACAAAAAGAAG 59.018 37.500 0.00 0.00 0.00 2.85
1271 1422 5.687730 TGTAACACAACACACACACAAAAAG 59.312 36.000 0.00 0.00 0.00 2.27
1272 1423 5.588240 TGTAACACAACACACACACAAAAA 58.412 33.333 0.00 0.00 0.00 1.94
1273 1424 5.183014 TGTAACACAACACACACACAAAA 57.817 34.783 0.00 0.00 0.00 2.44
1274 1425 4.276183 ACTGTAACACAACACACACACAAA 59.724 37.500 0.00 0.00 0.00 2.83
1275 1426 3.815962 ACTGTAACACAACACACACACAA 59.184 39.130 0.00 0.00 0.00 3.33
1276 1427 3.403968 ACTGTAACACAACACACACACA 58.596 40.909 0.00 0.00 0.00 3.72
1277 1428 4.413495 AACTGTAACACAACACACACAC 57.587 40.909 0.00 0.00 0.00 3.82
1278 1429 5.440234 AAAACTGTAACACAACACACACA 57.560 34.783 0.00 0.00 0.00 3.72
1279 1430 5.387958 GCAAAAACTGTAACACAACACACAC 60.388 40.000 0.00 0.00 0.00 3.82
1280 1431 4.681942 GCAAAAACTGTAACACAACACACA 59.318 37.500 0.00 0.00 0.00 3.72
1281 1432 4.920927 AGCAAAAACTGTAACACAACACAC 59.079 37.500 0.00 0.00 0.00 3.82
1282 1433 5.048364 AGAGCAAAAACTGTAACACAACACA 60.048 36.000 0.00 0.00 0.00 3.72
1320 1471 1.463444 GCGACAGGTGAACCAATGTAC 59.537 52.381 1.62 0.00 38.89 2.90
1347 1498 0.671781 GAGAGCACGACTGCACCAAT 60.672 55.000 0.52 0.00 46.97 3.16
1441 1592 2.099141 TCATCCAACTAGTGCACAGC 57.901 50.000 21.04 0.00 0.00 4.40
1570 1722 8.627403 CAAAATATAACAGCCAGAGATGTCATT 58.373 33.333 0.00 0.00 43.21 2.57
1673 1825 6.653989 AGGGAAAATACTAACAGTCCATCAG 58.346 40.000 0.00 0.00 0.00 2.90
1720 1873 4.831741 TTACAAAACTTGCAACAAAGCG 57.168 36.364 0.00 0.00 37.31 4.68
1749 1902 4.320788 GCCTTTCTTTCATCACCACAGAAG 60.321 45.833 0.00 0.00 0.00 2.85
1788 1941 7.829211 AGCTTCAGATGGCACTAAAAATAAGTA 59.171 33.333 0.00 0.00 0.00 2.24
1800 1953 3.057033 ACAAATCAAGCTTCAGATGGCAC 60.057 43.478 0.00 0.00 0.00 5.01
1916 2069 2.169769 CGTAAGGGGGATTGTAGCTCAA 59.830 50.000 0.00 0.00 40.53 3.02
2077 2231 5.030874 GGTGCAGCCAACGATATAAATAC 57.969 43.478 4.03 0.00 37.17 1.89
2265 2422 6.233434 TCTTCTGCACAACATTCTCAGTAAT 58.767 36.000 0.00 0.00 0.00 1.89
2318 2475 3.070018 CGAGAGAAAAATGCACACCTCT 58.930 45.455 0.00 0.00 34.11 3.69
2377 2534 6.217294 AGTAGCACTCTAAGTCACTTCAAAC 58.783 40.000 0.00 0.00 0.00 2.93
2531 2882 1.454847 TGGGCAGTGTCCAAACCAC 60.455 57.895 15.80 0.00 32.75 4.16
2615 2966 2.158475 AGGAAACAGTGGCATCCTTCAA 60.158 45.455 0.68 0.00 39.23 2.69
2638 3180 9.996554 AACCAAAAGAAGAAAGAAAGAAAGAAA 57.003 25.926 0.00 0.00 0.00 2.52
2681 3223 6.127814 ACAAATGATTATGAGTGCTTCAGGTG 60.128 38.462 0.00 0.00 39.68 4.00
2689 3231 8.385111 CCAAATTTCACAAATGATTATGAGTGC 58.615 33.333 0.00 0.00 33.85 4.40
2698 3240 5.366460 TGTGCACCAAATTTCACAAATGAT 58.634 33.333 15.69 0.00 36.62 2.45
2834 4816 8.964476 TTAATCATCCATTCAAGGTCTTCTAC 57.036 34.615 0.00 0.00 0.00 2.59
2939 4921 0.520847 GAAGTTGCTTGAGAGGCAGC 59.479 55.000 0.00 0.00 40.90 5.25
2967 4949 6.169094 ACACAATCTTATTGGTCTGACTGAG 58.831 40.000 7.85 0.00 0.00 3.35
3050 5034 3.941483 CACTGATGGACTAAAATCCGCTT 59.059 43.478 0.00 0.00 42.24 4.68
3056 5040 6.182627 TCATGAAGCACTGATGGACTAAAAT 58.817 36.000 0.00 0.00 0.00 1.82
3110 5094 4.631131 CACGGCTTATTAGGATCATCACA 58.369 43.478 0.00 0.00 0.00 3.58
3111 5095 3.433615 GCACGGCTTATTAGGATCATCAC 59.566 47.826 0.00 0.00 0.00 3.06
3112 5096 3.557054 GGCACGGCTTATTAGGATCATCA 60.557 47.826 0.00 0.00 0.00 3.07
3292 5276 1.139734 CTCACTCGTGGGACGGATG 59.860 63.158 0.00 0.00 42.81 3.51
3328 5312 5.189928 TGGCTTCTTATCCATTTAGCGAAA 58.810 37.500 0.00 0.00 0.00 3.46
3437 5421 2.439837 CCACCAGGCACCAAACAAT 58.560 52.632 0.00 0.00 0.00 2.71
3491 5487 7.177216 ACAAGACAATAATGGCAATCTTGAAGA 59.823 33.333 21.28 0.00 43.65 2.87
3494 5490 6.839124 ACAAGACAATAATGGCAATCTTGA 57.161 33.333 21.28 0.00 43.65 3.02
3557 5553 5.806286 ACTGTATTTATTTCATTCGCACCG 58.194 37.500 0.00 0.00 0.00 4.94
3558 5554 6.851330 GCTACTGTATTTATTTCATTCGCACC 59.149 38.462 0.00 0.00 0.00 5.01
3602 5598 0.182061 CTCAGGCACCATGGCACTAT 59.818 55.000 13.04 0.00 46.46 2.12
3607 5603 0.830648 TAGTACTCAGGCACCATGGC 59.169 55.000 13.04 0.00 44.10 4.40
3608 5604 2.363680 CTCTAGTACTCAGGCACCATGG 59.636 54.545 11.19 11.19 0.00 3.66
3610 5606 2.035632 GCTCTAGTACTCAGGCACCAT 58.964 52.381 0.00 0.00 0.00 3.55
3611 5607 1.475403 GCTCTAGTACTCAGGCACCA 58.525 55.000 0.00 0.00 0.00 4.17
3612 5608 0.747852 GGCTCTAGTACTCAGGCACC 59.252 60.000 18.53 4.23 33.00 5.01
3613 5609 1.475403 TGGCTCTAGTACTCAGGCAC 58.525 55.000 20.99 9.63 37.77 5.01
3614 5610 2.103373 CTTGGCTCTAGTACTCAGGCA 58.897 52.381 20.99 20.99 40.69 4.75
3615 5611 1.410882 CCTTGGCTCTAGTACTCAGGC 59.589 57.143 17.24 17.24 0.00 4.85
3616 5612 2.691011 GTCCTTGGCTCTAGTACTCAGG 59.309 54.545 0.00 0.00 0.00 3.86
3617 5613 3.357203 TGTCCTTGGCTCTAGTACTCAG 58.643 50.000 0.00 0.00 0.00 3.35
3618 5614 3.451402 TGTCCTTGGCTCTAGTACTCA 57.549 47.619 0.00 0.00 0.00 3.41
3628 5624 3.515602 AAGAAACAGATGTCCTTGGCT 57.484 42.857 0.00 0.00 0.00 4.75
3633 5629 8.324306 TCTATGATTCAAAGAAACAGATGTCCT 58.676 33.333 0.00 0.00 0.00 3.85
3706 5702 2.671914 CGGGCACAAATCAGAATGTTGG 60.672 50.000 0.00 0.00 37.40 3.77
3715 5711 3.068732 TCAAAATGTTCGGGCACAAATCA 59.931 39.130 0.00 0.00 0.00 2.57
3727 5723 3.316868 TGGTCCTTCCGTTCAAAATGTTC 59.683 43.478 0.00 0.00 39.52 3.18
3799 5795 3.914426 ATGGAGTAACCGAGCTGAAAT 57.086 42.857 0.00 0.00 42.61 2.17
3807 5803 4.472108 AGGTTGGAATTATGGAGTAACCGA 59.528 41.667 0.00 0.00 40.62 4.69
3932 5930 5.763698 TGCATGGAATTTGCTTCATTTCAAA 59.236 32.000 2.52 0.00 40.77 2.69
3933 5931 5.179742 GTGCATGGAATTTGCTTCATTTCAA 59.820 36.000 0.00 0.00 40.77 2.69
3940 5938 2.997986 CAAGGTGCATGGAATTTGCTTC 59.002 45.455 0.00 0.00 40.77 3.86
4155 6153 5.593502 AGGAACGGAGGTAGTAGTTCATAAG 59.406 44.000 9.01 0.00 43.24 1.73
4161 6159 9.646522 TTATATTTAGGAACGGAGGTAGTAGTT 57.353 33.333 0.00 0.00 0.00 2.24
4164 6162 9.289782 GACTTATATTTAGGAACGGAGGTAGTA 57.710 37.037 0.00 0.00 0.00 1.82
4165 6163 8.003629 AGACTTATATTTAGGAACGGAGGTAGT 58.996 37.037 0.00 0.00 0.00 2.73
4166 6164 8.406730 AGACTTATATTTAGGAACGGAGGTAG 57.593 38.462 0.00 0.00 0.00 3.18
4167 6165 8.773033 AAGACTTATATTTAGGAACGGAGGTA 57.227 34.615 0.00 0.00 0.00 3.08
4168 6166 7.672122 AAGACTTATATTTAGGAACGGAGGT 57.328 36.000 0.00 0.00 0.00 3.85
4169 6167 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
4195 6193 9.999009 CGTATGTAGTTTGTAGTGAAATCTCTA 57.001 33.333 0.00 0.00 0.00 2.43
4196 6194 7.974501 CCGTATGTAGTTTGTAGTGAAATCTCT 59.025 37.037 0.00 0.00 0.00 3.10
4197 6195 7.972277 TCCGTATGTAGTTTGTAGTGAAATCTC 59.028 37.037 0.00 0.00 0.00 2.75
4198 6196 7.833786 TCCGTATGTAGTTTGTAGTGAAATCT 58.166 34.615 0.00 0.00 0.00 2.40
4199 6197 8.644318 ATCCGTATGTAGTTTGTAGTGAAATC 57.356 34.615 0.00 0.00 0.00 2.17
4245 6243 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
4246 6244 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
4247 6245 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
4248 6246 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
4249 6247 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
4250 6248 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
4251 6249 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
4252 6250 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
4253 6251 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
4254 6252 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
4255 6253 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
4256 6254 4.508124 GGACTACATACGGAGCAAAATGAG 59.492 45.833 0.00 0.00 0.00 2.90
4257 6255 4.081365 TGGACTACATACGGAGCAAAATGA 60.081 41.667 0.00 0.00 0.00 2.57
4258 6256 4.188462 TGGACTACATACGGAGCAAAATG 58.812 43.478 0.00 0.00 0.00 2.32
4259 6257 4.481368 TGGACTACATACGGAGCAAAAT 57.519 40.909 0.00 0.00 0.00 1.82
4260 6258 3.965379 TGGACTACATACGGAGCAAAA 57.035 42.857 0.00 0.00 0.00 2.44
4261 6259 4.647853 ACTATGGACTACATACGGAGCAAA 59.352 41.667 0.00 0.00 41.03 3.68
4262 6260 4.037565 CACTATGGACTACATACGGAGCAA 59.962 45.833 0.00 0.00 41.03 3.91
4263 6261 3.568430 CACTATGGACTACATACGGAGCA 59.432 47.826 0.00 0.00 41.03 4.26
4264 6262 3.057456 CCACTATGGACTACATACGGAGC 60.057 52.174 0.00 0.00 40.96 4.70
4265 6263 4.395625 TCCACTATGGACTACATACGGAG 58.604 47.826 0.00 0.00 42.67 4.63
4266 6264 4.442401 TCCACTATGGACTACATACGGA 57.558 45.455 0.00 0.00 42.67 4.69
4277 6275 8.380742 AGTCTTTTTAGAGATTCCACTATGGA 57.619 34.615 0.00 0.00 46.61 3.41
4289 6287 9.490379 GTTCCTGAATGTAAGTCTTTTTAGAGA 57.510 33.333 0.00 0.00 0.00 3.10
4290 6288 8.436200 CGTTCCTGAATGTAAGTCTTTTTAGAG 58.564 37.037 0.00 0.00 0.00 2.43
4291 6289 7.386848 CCGTTCCTGAATGTAAGTCTTTTTAGA 59.613 37.037 0.00 0.00 0.00 2.10
4292 6290 7.386848 TCCGTTCCTGAATGTAAGTCTTTTTAG 59.613 37.037 0.00 0.00 0.00 1.85
4293 6291 7.218614 TCCGTTCCTGAATGTAAGTCTTTTTA 58.781 34.615 0.00 0.00 0.00 1.52
4294 6292 6.059484 TCCGTTCCTGAATGTAAGTCTTTTT 58.941 36.000 0.00 0.00 0.00 1.94
4295 6293 5.617252 TCCGTTCCTGAATGTAAGTCTTTT 58.383 37.500 0.00 0.00 0.00 2.27
4296 6294 5.223449 TCCGTTCCTGAATGTAAGTCTTT 57.777 39.130 0.00 0.00 0.00 2.52
4297 6295 4.322801 CCTCCGTTCCTGAATGTAAGTCTT 60.323 45.833 0.00 0.00 0.00 3.01
4298 6296 3.195825 CCTCCGTTCCTGAATGTAAGTCT 59.804 47.826 0.00 0.00 0.00 3.24
4299 6297 3.522553 CCTCCGTTCCTGAATGTAAGTC 58.477 50.000 0.00 0.00 0.00 3.01
4300 6298 2.236395 CCCTCCGTTCCTGAATGTAAGT 59.764 50.000 0.00 0.00 0.00 2.24
4301 6299 2.500098 TCCCTCCGTTCCTGAATGTAAG 59.500 50.000 0.00 0.00 0.00 2.34
4302 6300 2.500098 CTCCCTCCGTTCCTGAATGTAA 59.500 50.000 0.00 0.00 0.00 2.41
4303 6301 2.108168 CTCCCTCCGTTCCTGAATGTA 58.892 52.381 0.00 0.00 0.00 2.29
4304 6302 0.905357 CTCCCTCCGTTCCTGAATGT 59.095 55.000 0.00 0.00 0.00 2.71
4305 6303 0.905357 ACTCCCTCCGTTCCTGAATG 59.095 55.000 0.00 0.00 0.00 2.67
4306 6304 2.544844 TACTCCCTCCGTTCCTGAAT 57.455 50.000 0.00 0.00 0.00 2.57
4307 6305 2.544844 ATACTCCCTCCGTTCCTGAA 57.455 50.000 0.00 0.00 0.00 3.02
4308 6306 2.544844 AATACTCCCTCCGTTCCTGA 57.455 50.000 0.00 0.00 0.00 3.86
4309 6307 4.748277 TTAAATACTCCCTCCGTTCCTG 57.252 45.455 0.00 0.00 0.00 3.86
4310 6308 5.970501 ATTTAAATACTCCCTCCGTTCCT 57.029 39.130 0.00 0.00 0.00 3.36
4311 6309 7.174426 CCAATATTTAAATACTCCCTCCGTTCC 59.826 40.741 10.07 0.00 0.00 3.62
4312 6310 7.718314 ACCAATATTTAAATACTCCCTCCGTTC 59.282 37.037 10.07 0.00 0.00 3.95
4313 6311 7.580007 ACCAATATTTAAATACTCCCTCCGTT 58.420 34.615 10.07 0.00 0.00 4.44
4314 6312 7.145474 ACCAATATTTAAATACTCCCTCCGT 57.855 36.000 10.07 0.00 0.00 4.69
4315 6313 8.349983 CAAACCAATATTTAAATACTCCCTCCG 58.650 37.037 10.07 0.00 0.00 4.63
4316 6314 9.197306 ACAAACCAATATTTAAATACTCCCTCC 57.803 33.333 10.07 0.00 0.00 4.30
4352 6350 0.106719 CCAACCCAGTGAACCAGTGT 60.107 55.000 0.00 0.00 33.37 3.55
4354 6352 0.629058 AACCAACCCAGTGAACCAGT 59.371 50.000 0.00 0.00 0.00 4.00
4441 6446 6.204359 ACGTTTCGTATCGTATAGCTTCATT 58.796 36.000 0.00 0.00 38.73 2.57
4633 6640 9.749490 GAACACAGCAATATTTCATTCATTTTG 57.251 29.630 0.00 0.00 0.00 2.44
4634 6641 9.491675 TGAACACAGCAATATTTCATTCATTTT 57.508 25.926 0.00 0.00 0.00 1.82
4635 6642 9.661563 ATGAACACAGCAATATTTCATTCATTT 57.338 25.926 0.00 0.00 34.02 2.32
4695 6702 8.087750 TGAAAATTGAAATTCCACATGTAGGTC 58.912 33.333 0.00 0.00 0.00 3.85
4717 6724 7.831691 TGGAGAACCTGATAAAATTGTGAAA 57.168 32.000 0.00 0.00 37.04 2.69
4815 6822 0.388006 CCACCGGCGAATTTTTCCAC 60.388 55.000 9.30 0.00 0.00 4.02
4829 6836 3.682858 CACTGGTTGTATAAAGTCCACCG 59.317 47.826 0.00 0.00 0.00 4.94
4847 6854 8.470805 AGTTCTTATATCAGTACCTCAACACTG 58.529 37.037 0.00 0.00 42.88 3.66
4860 6867 9.388346 CTAGACGTAGCAAAGTTCTTATATCAG 57.612 37.037 0.00 0.00 0.00 2.90
4913 6920 6.218746 CCTGAAAATAAAGAAACAGCTTGCT 58.781 36.000 0.00 0.00 0.00 3.91
5453 7468 0.179000 CCGAGGCTGAGCAACCTTAT 59.821 55.000 6.82 0.00 36.05 1.73
5852 7868 1.661480 CACGGGTTACCTCACGACA 59.339 57.895 0.00 0.00 37.68 4.35
6009 8034 1.272760 ACAGCTACCTCTGCCTACAGT 60.273 52.381 0.00 0.00 44.77 3.55
6010 8035 1.479709 ACAGCTACCTCTGCCTACAG 58.520 55.000 0.00 0.00 45.95 2.74
6011 8036 2.820728 TACAGCTACCTCTGCCTACA 57.179 50.000 0.00 0.00 37.59 2.74
6012 8037 5.986501 AATATACAGCTACCTCTGCCTAC 57.013 43.478 0.00 0.00 37.59 3.18
6013 8038 5.480772 GGAAATATACAGCTACCTCTGCCTA 59.519 44.000 0.00 0.00 37.59 3.93
6014 8039 4.284746 GGAAATATACAGCTACCTCTGCCT 59.715 45.833 0.00 0.00 37.59 4.75
6015 8040 4.563786 GGGAAATATACAGCTACCTCTGCC 60.564 50.000 0.00 0.00 37.59 4.85
6089 8114 2.511600 GGCGGCGTATTCAGCAGT 60.512 61.111 9.37 0.00 36.08 4.40
6189 8215 3.617538 GCGTAGACATCGGTGCGC 61.618 66.667 0.00 0.00 38.15 6.09
6302 8335 4.250170 ACGACCTGGACCCTGGGT 62.250 66.667 20.72 20.72 39.44 4.51
6328 8361 4.080299 ACAAGGAGACCAGACAGTTCTTTT 60.080 41.667 0.00 0.00 0.00 2.27
6332 8365 2.630580 AGACAAGGAGACCAGACAGTTC 59.369 50.000 0.00 0.00 0.00 3.01
6349 8382 2.203832 TGCAGCTCCCCAGAGACA 60.204 61.111 0.00 0.00 43.39 3.41
6353 8386 3.324930 CACCTGCAGCTCCCCAGA 61.325 66.667 8.66 0.00 0.00 3.86
6359 8392 1.022735 CATGGAATCACCTGCAGCTC 58.977 55.000 8.66 0.00 39.86 4.09
6363 8396 1.380246 GCCCATGGAATCACCTGCA 60.380 57.895 15.22 0.00 39.86 4.41
6365 8398 0.179009 ATCGCCCATGGAATCACCTG 60.179 55.000 15.22 0.00 39.86 4.00
6372 8405 0.320374 GATACCGATCGCCCATGGAA 59.680 55.000 15.22 0.00 0.00 3.53
6392 8425 1.379044 GCTATGGTTGCAGGCCACT 60.379 57.895 13.30 6.82 39.03 4.00
6407 8440 3.418744 TATTCGTGCGCGCTGGCTA 62.419 57.895 33.29 14.00 38.14 3.93
6413 8446 1.480219 AAGTAGCTATTCGTGCGCGC 61.480 55.000 27.26 27.26 38.14 6.86
6499 8533 3.329386 CAGATGTATACCAGCATTCCCG 58.671 50.000 0.00 0.00 0.00 5.14
6560 10130 6.072064 GCTCCTACACAGAACTGTCTAGTTAA 60.072 42.308 13.26 2.47 46.79 2.01
6571 10141 0.737715 CCGCTGCTCCTACACAGAAC 60.738 60.000 0.00 0.00 35.90 3.01
6582 10152 1.071605 CAGAACACTAACCGCTGCTC 58.928 55.000 0.00 0.00 0.00 4.26
6583 10153 0.393077 ACAGAACACTAACCGCTGCT 59.607 50.000 0.00 0.00 0.00 4.24
6589 10159 7.718525 TGGGAAAATAAAACAGAACACTAACC 58.281 34.615 0.00 0.00 0.00 2.85
6680 10275 7.737607 TCCTATAACATATAGAACACCCCACAT 59.262 37.037 6.07 0.00 0.00 3.21
6732 10328 9.577003 CCGCTAAAACGTCTTATATTTATGAAC 57.423 33.333 0.00 0.00 0.00 3.18
6733 10329 9.316730 ACCGCTAAAACGTCTTATATTTATGAA 57.683 29.630 0.00 0.00 0.00 2.57
6734 10330 8.876275 ACCGCTAAAACGTCTTATATTTATGA 57.124 30.769 0.00 0.00 0.00 2.15
6741 10337 9.616634 CAATCTATACCGCTAAAACGTCTTATA 57.383 33.333 0.00 0.00 0.00 0.98
6742 10338 8.355169 TCAATCTATACCGCTAAAACGTCTTAT 58.645 33.333 0.00 0.00 0.00 1.73
6743 10339 7.706159 TCAATCTATACCGCTAAAACGTCTTA 58.294 34.615 0.00 0.00 0.00 2.10
6744 10340 6.567050 TCAATCTATACCGCTAAAACGTCTT 58.433 36.000 0.00 0.00 0.00 3.01
6745 10341 6.140303 TCAATCTATACCGCTAAAACGTCT 57.860 37.500 0.00 0.00 0.00 4.18
6746 10342 6.474751 AGTTCAATCTATACCGCTAAAACGTC 59.525 38.462 0.00 0.00 0.00 4.34
6747 10343 6.255020 CAGTTCAATCTATACCGCTAAAACGT 59.745 38.462 0.00 0.00 0.00 3.99
6748 10344 6.637365 CAGTTCAATCTATACCGCTAAAACG 58.363 40.000 0.00 0.00 0.00 3.60
6749 10345 6.419771 GCAGTTCAATCTATACCGCTAAAAC 58.580 40.000 0.00 0.00 0.00 2.43
6750 10346 5.526111 GGCAGTTCAATCTATACCGCTAAAA 59.474 40.000 0.00 0.00 0.00 1.52
6751 10347 5.054477 GGCAGTTCAATCTATACCGCTAAA 58.946 41.667 0.00 0.00 0.00 1.85
6752 10348 4.100344 TGGCAGTTCAATCTATACCGCTAA 59.900 41.667 0.00 0.00 0.00 3.09
6753 10349 3.639561 TGGCAGTTCAATCTATACCGCTA 59.360 43.478 0.00 0.00 0.00 4.26
6754 10350 2.434336 TGGCAGTTCAATCTATACCGCT 59.566 45.455 0.00 0.00 0.00 5.52
6755 10351 2.833794 TGGCAGTTCAATCTATACCGC 58.166 47.619 0.00 0.00 0.00 5.68
6756 10352 5.569413 GTTTTGGCAGTTCAATCTATACCG 58.431 41.667 0.00 0.00 0.00 4.02
6757 10353 5.123344 ACGTTTTGGCAGTTCAATCTATACC 59.877 40.000 0.00 0.00 0.00 2.73
6758 10354 6.128391 TGACGTTTTGGCAGTTCAATCTATAC 60.128 38.462 0.00 0.00 0.00 1.47
6759 10355 5.935206 TGACGTTTTGGCAGTTCAATCTATA 59.065 36.000 0.00 0.00 0.00 1.31
6760 10356 4.759693 TGACGTTTTGGCAGTTCAATCTAT 59.240 37.500 0.00 0.00 0.00 1.98
6761 10357 4.130857 TGACGTTTTGGCAGTTCAATCTA 58.869 39.130 0.00 0.00 0.00 1.98
6762 10358 2.948979 TGACGTTTTGGCAGTTCAATCT 59.051 40.909 0.00 0.00 0.00 2.40
6763 10359 3.347958 TGACGTTTTGGCAGTTCAATC 57.652 42.857 0.00 0.00 0.00 2.67
6764 10360 5.643379 ATATGACGTTTTGGCAGTTCAAT 57.357 34.783 0.00 0.00 0.00 2.57
6765 10361 6.751514 ATATATGACGTTTTGGCAGTTCAA 57.248 33.333 0.00 0.00 0.00 2.69
6766 10362 6.751514 AATATATGACGTTTTGGCAGTTCA 57.248 33.333 0.00 0.00 0.00 3.18
6767 10363 8.609176 TCTAAATATATGACGTTTTGGCAGTTC 58.391 33.333 0.00 0.00 0.00 3.01
6768 10364 8.500753 TCTAAATATATGACGTTTTGGCAGTT 57.499 30.769 0.00 0.00 0.00 3.16
6769 10365 8.500753 TTCTAAATATATGACGTTTTGGCAGT 57.499 30.769 0.00 0.00 0.00 4.40
6770 10366 9.221775 GTTTCTAAATATATGACGTTTTGGCAG 57.778 33.333 0.00 0.00 0.00 4.85
6771 10367 7.906010 CGTTTCTAAATATATGACGTTTTGGCA 59.094 33.333 0.00 0.00 0.00 4.92
6772 10368 7.375017 CCGTTTCTAAATATATGACGTTTTGGC 59.625 37.037 0.00 0.00 0.00 4.52
6773 10369 8.605746 TCCGTTTCTAAATATATGACGTTTTGG 58.394 33.333 0.00 0.00 0.00 3.28
6774 10370 9.632969 CTCCGTTTCTAAATATATGACGTTTTG 57.367 33.333 0.00 0.00 0.00 2.44
6775 10371 8.823818 CCTCCGTTTCTAAATATATGACGTTTT 58.176 33.333 0.00 0.00 0.00 2.43
6776 10372 7.440255 CCCTCCGTTTCTAAATATATGACGTTT 59.560 37.037 0.00 0.00 0.00 3.60
6777 10373 6.927381 CCCTCCGTTTCTAAATATATGACGTT 59.073 38.462 0.00 0.00 0.00 3.99
6778 10374 6.266103 TCCCTCCGTTTCTAAATATATGACGT 59.734 38.462 0.00 0.00 0.00 4.34
6779 10375 6.684686 TCCCTCCGTTTCTAAATATATGACG 58.315 40.000 0.00 0.00 0.00 4.35
6780 10376 7.668492 ACTCCCTCCGTTTCTAAATATATGAC 58.332 38.462 0.00 0.00 0.00 3.06
6781 10377 7.850935 ACTCCCTCCGTTTCTAAATATATGA 57.149 36.000 0.00 0.00 0.00 2.15
6782 10378 8.582437 TGTACTCCCTCCGTTTCTAAATATATG 58.418 37.037 0.00 0.00 0.00 1.78
6783 10379 8.716674 TGTACTCCCTCCGTTTCTAAATATAT 57.283 34.615 0.00 0.00 0.00 0.86
6784 10380 8.716674 ATGTACTCCCTCCGTTTCTAAATATA 57.283 34.615 0.00 0.00 0.00 0.86
6785 10381 7.613551 ATGTACTCCCTCCGTTTCTAAATAT 57.386 36.000 0.00 0.00 0.00 1.28
6786 10382 7.093201 ACAATGTACTCCCTCCGTTTCTAAATA 60.093 37.037 0.00 0.00 0.00 1.40
6787 10383 5.952347 ATGTACTCCCTCCGTTTCTAAAT 57.048 39.130 0.00 0.00 0.00 1.40
6788 10384 5.012354 ACAATGTACTCCCTCCGTTTCTAAA 59.988 40.000 0.00 0.00 0.00 1.85
6789 10385 4.529377 ACAATGTACTCCCTCCGTTTCTAA 59.471 41.667 0.00 0.00 0.00 2.10
6790 10386 4.091549 ACAATGTACTCCCTCCGTTTCTA 58.908 43.478 0.00 0.00 0.00 2.10
6791 10387 2.904434 ACAATGTACTCCCTCCGTTTCT 59.096 45.455 0.00 0.00 0.00 2.52
6792 10388 3.329929 ACAATGTACTCCCTCCGTTTC 57.670 47.619 0.00 0.00 0.00 2.78
6793 10389 3.782656 AACAATGTACTCCCTCCGTTT 57.217 42.857 0.00 0.00 0.00 3.60
6794 10390 3.782656 AAACAATGTACTCCCTCCGTT 57.217 42.857 0.00 0.00 0.00 4.44
6795 10391 3.408634 CAAAACAATGTACTCCCTCCGT 58.591 45.455 0.00 0.00 0.00 4.69
6796 10392 2.161609 GCAAAACAATGTACTCCCTCCG 59.838 50.000 0.00 0.00 0.00 4.63
6797 10393 2.161609 CGCAAAACAATGTACTCCCTCC 59.838 50.000 0.00 0.00 0.00 4.30
6798 10394 2.812011 ACGCAAAACAATGTACTCCCTC 59.188 45.455 0.00 0.00 0.00 4.30
6799 10395 2.812011 GACGCAAAACAATGTACTCCCT 59.188 45.455 0.00 0.00 0.00 4.20
6800 10396 2.812011 AGACGCAAAACAATGTACTCCC 59.188 45.455 0.00 0.00 0.00 4.30
6801 10397 3.496884 TCAGACGCAAAACAATGTACTCC 59.503 43.478 0.00 0.00 0.00 3.85
6802 10398 4.725556 TCAGACGCAAAACAATGTACTC 57.274 40.909 0.00 0.00 0.00 2.59
6803 10399 5.493133 TTTCAGACGCAAAACAATGTACT 57.507 34.783 0.00 0.00 0.00 2.73
6804 10400 7.218204 GGATATTTCAGACGCAAAACAATGTAC 59.782 37.037 0.00 0.00 0.00 2.90
6805 10401 7.247728 GGATATTTCAGACGCAAAACAATGTA 58.752 34.615 0.00 0.00 0.00 2.29
6806 10402 6.092748 GGATATTTCAGACGCAAAACAATGT 58.907 36.000 0.00 0.00 0.00 2.71
6807 10403 5.516339 GGGATATTTCAGACGCAAAACAATG 59.484 40.000 0.00 0.00 0.00 2.82
6811 10407 4.695217 TGGGATATTTCAGACGCAAAAC 57.305 40.909 0.00 0.00 0.00 2.43
6817 10413 9.831737 GAATATTCAAATGGGATATTTCAGACG 57.168 33.333 10.68 0.00 0.00 4.18
6974 10575 6.688073 TCCTCTAATGGATCAGGAATAACC 57.312 41.667 0.00 0.00 39.35 2.85
7006 10610 4.743151 CGCATACTTCTTTAATAGCCGTCA 59.257 41.667 0.00 0.00 0.00 4.35
7051 10655 3.056313 GCACGAATCCCAGCTTGGC 62.056 63.158 0.00 0.00 35.79 4.52
7085 10689 3.444034 TCCATTCAGGAGTGTAGTTCTCG 59.556 47.826 0.00 0.00 43.07 4.04
7115 10719 2.597455 ACACCTTTCATTTCCCAGTGG 58.403 47.619 0.63 0.63 0.00 4.00
7187 10791 3.837213 AACTGAATGCTGACAATTCCG 57.163 42.857 0.00 0.00 0.00 4.30
7258 10887 6.600822 CAGAATAAATGGTCATGAAGGTGACT 59.399 38.462 0.00 0.00 46.02 3.41
7263 10892 4.261322 CCGCAGAATAAATGGTCATGAAGG 60.261 45.833 0.00 0.00 0.00 3.46
7272 10901 6.640907 GCTTAAATTACCCGCAGAATAAATGG 59.359 38.462 0.00 0.00 0.00 3.16
7301 10930 2.576615 GCACCTGAAAAGACAGAAGGT 58.423 47.619 0.00 0.00 41.99 3.50
7326 10957 0.104120 CACCATTATCTCGGCGGACA 59.896 55.000 7.21 0.00 0.00 4.02
7338 10969 6.194235 AGGAATATCAACCTTTGCACCATTA 58.806 36.000 0.00 0.00 31.95 1.90
7387 11018 7.331026 TCTTGAATCCTATCCAGTAACACTTG 58.669 38.462 0.00 0.00 0.00 3.16
7389 11020 7.682787 ATCTTGAATCCTATCCAGTAACACT 57.317 36.000 0.00 0.00 0.00 3.55
7492 11123 4.094590 CAGGATCAGCTTCTTGTCATTCAC 59.905 45.833 0.00 0.00 0.00 3.18
7513 11144 2.184830 CATCGCACCATGGAGCCAG 61.185 63.158 25.90 14.50 0.00 4.85
7594 11225 4.945543 ACTGAATGATAAACATGCTGAGCA 59.054 37.500 10.59 10.59 44.86 4.26
7713 11344 4.101741 ACCATACCTTCTACAAGATCTGGC 59.898 45.833 0.00 0.00 30.16 4.85
7723 11354 6.210984 AGGAAATCCGATACCATACCTTCTAC 59.789 42.308 7.12 0.00 42.08 2.59
7724 11355 6.320518 AGGAAATCCGATACCATACCTTCTA 58.679 40.000 7.12 0.00 42.08 2.10
7735 11366 8.443937 GCACTGAAATATTAGGAAATCCGATAC 58.556 37.037 0.00 0.00 42.08 2.24
7823 11458 3.069586 TCAGAGCCTCGTCTTCTCAAAAA 59.930 43.478 0.00 0.00 0.00 1.94
7824 11459 2.628178 TCAGAGCCTCGTCTTCTCAAAA 59.372 45.455 0.00 0.00 0.00 2.44
7825 11460 2.239400 TCAGAGCCTCGTCTTCTCAAA 58.761 47.619 0.00 0.00 0.00 2.69
7826 11461 1.911057 TCAGAGCCTCGTCTTCTCAA 58.089 50.000 0.00 0.00 0.00 3.02
7827 11462 2.020720 GATCAGAGCCTCGTCTTCTCA 58.979 52.381 0.00 0.00 0.00 3.27
7828 11463 2.020720 TGATCAGAGCCTCGTCTTCTC 58.979 52.381 0.00 0.00 0.00 2.87
7829 11464 2.136298 TGATCAGAGCCTCGTCTTCT 57.864 50.000 0.00 0.00 0.00 2.85
7830 11465 2.100584 ACATGATCAGAGCCTCGTCTTC 59.899 50.000 0.00 0.00 0.00 2.87
7831 11466 2.106566 ACATGATCAGAGCCTCGTCTT 58.893 47.619 0.00 0.00 0.00 3.01
7832 11467 1.408340 CACATGATCAGAGCCTCGTCT 59.592 52.381 0.00 0.00 0.00 4.18
7833 11468 1.135915 ACACATGATCAGAGCCTCGTC 59.864 52.381 0.00 0.00 0.00 4.20
7834 11469 1.134877 CACACATGATCAGAGCCTCGT 60.135 52.381 0.00 0.00 0.00 4.18
7835 11470 1.134877 ACACACATGATCAGAGCCTCG 60.135 52.381 0.00 0.00 0.00 4.63
7836 11471 2.277969 CACACACATGATCAGAGCCTC 58.722 52.381 0.00 0.00 0.00 4.70
7837 11472 1.627329 ACACACACATGATCAGAGCCT 59.373 47.619 0.00 0.00 0.00 4.58
7838 11473 1.736126 CACACACACATGATCAGAGCC 59.264 52.381 0.00 0.00 0.00 4.70
7839 11474 1.736126 CCACACACACATGATCAGAGC 59.264 52.381 0.00 0.00 0.00 4.09
7840 11475 3.049708 ACCACACACACATGATCAGAG 57.950 47.619 0.00 0.00 0.00 3.35
7841 11476 4.824479 ATACCACACACACATGATCAGA 57.176 40.909 0.00 0.00 0.00 3.27
7842 11477 5.885230 AAATACCACACACACATGATCAG 57.115 39.130 0.00 0.00 0.00 2.90
7843 11478 6.445475 CAAAAATACCACACACACATGATCA 58.555 36.000 0.00 0.00 0.00 2.92
7844 11479 5.345741 GCAAAAATACCACACACACATGATC 59.654 40.000 0.00 0.00 0.00 2.92
7845 11480 5.229423 GCAAAAATACCACACACACATGAT 58.771 37.500 0.00 0.00 0.00 2.45
7846 11481 4.615949 GCAAAAATACCACACACACATGA 58.384 39.130 0.00 0.00 0.00 3.07
7847 11482 3.424861 CGCAAAAATACCACACACACATG 59.575 43.478 0.00 0.00 0.00 3.21
7848 11483 3.637432 CGCAAAAATACCACACACACAT 58.363 40.909 0.00 0.00 0.00 3.21
7849 11484 2.796383 GCGCAAAAATACCACACACACA 60.796 45.455 0.30 0.00 0.00 3.72
7850 11485 1.784283 GCGCAAAAATACCACACACAC 59.216 47.619 0.30 0.00 0.00 3.82
7853 11488 1.950216 TCAGCGCAAAAATACCACACA 59.050 42.857 11.47 0.00 0.00 3.72
7920 11555 2.907917 CGGCCCCAAAACGACCAA 60.908 61.111 0.00 0.00 0.00 3.67
7970 11612 2.256591 GCATGGCAGGCGGTATCAG 61.257 63.158 8.91 0.00 0.00 2.90
8089 11741 3.441163 TCTAGTAATAAGCAACACCGCG 58.559 45.455 0.00 0.00 36.85 6.46
8131 11788 1.738099 CTCACGGGGAAGAACAGCG 60.738 63.158 0.00 0.00 0.00 5.18
8132 11789 0.250513 ATCTCACGGGGAAGAACAGC 59.749 55.000 0.00 0.00 0.00 4.40
8135 11792 4.081586 AGAGTTAATCTCACGGGGAAGAAC 60.082 45.833 7.50 0.00 44.98 3.01
8136 11793 4.094476 AGAGTTAATCTCACGGGGAAGAA 58.906 43.478 7.50 0.00 44.98 2.52
8137 11794 3.709587 AGAGTTAATCTCACGGGGAAGA 58.290 45.455 7.50 0.00 44.98 2.87
8138 11795 4.473477 AAGAGTTAATCTCACGGGGAAG 57.527 45.455 7.50 0.00 44.98 3.46
8139 11796 4.903045 AAAGAGTTAATCTCACGGGGAA 57.097 40.909 7.50 0.00 44.98 3.97
8140 11797 4.903045 AAAAGAGTTAATCTCACGGGGA 57.097 40.909 7.50 0.00 44.98 4.81
8141 11798 5.246307 AGAAAAAGAGTTAATCTCACGGGG 58.754 41.667 7.50 0.00 44.98 5.73
8148 11805 9.930693 AAGACGACATAGAAAAAGAGTTAATCT 57.069 29.630 0.00 0.00 41.27 2.40
8169 11827 9.849166 AACATAACATAATTTAAACCCAAGACG 57.151 29.630 0.00 0.00 0.00 4.18
8204 11862 4.062293 GTGGCAGGCAAACACGATATATA 58.938 43.478 0.00 0.00 0.00 0.86
8224 11886 6.796426 TCTCAGAACAATATAGTCTTCGGTG 58.204 40.000 0.00 0.00 0.00 4.94
8227 11889 8.616942 TCTTCTCTCAGAACAATATAGTCTTCG 58.383 37.037 0.00 0.00 29.89 3.79
8234 11896 9.249053 ACTTCACTCTTCTCTCAGAACAATATA 57.751 33.333 0.00 0.00 29.89 0.86
8249 11911 4.127171 TGCACCTAACAACTTCACTCTTC 58.873 43.478 0.00 0.00 0.00 2.87
8303 11965 0.767375 AACCACCATCAGCTCACACT 59.233 50.000 0.00 0.00 0.00 3.55
8308 11970 3.201290 CTCATACAACCACCATCAGCTC 58.799 50.000 0.00 0.00 0.00 4.09
8371 12033 4.010349 GGCCCATGTGAGCCTTATAATAC 58.990 47.826 10.55 0.00 46.14 1.89
8373 12035 3.160679 GGCCCATGTGAGCCTTATAAT 57.839 47.619 10.55 0.00 46.14 1.28
8415 12077 1.488393 AGTGAAATAGGGAGCTGAGCC 59.512 52.381 0.00 0.00 0.00 4.70
8420 12082 3.100671 AGAACGAGTGAAATAGGGAGCT 58.899 45.455 0.00 0.00 0.00 4.09
8454 12116 0.456221 GCTAGCAGTGGAGCGACTAA 59.544 55.000 10.63 0.00 40.15 2.24
8455 12117 0.394488 AGCTAGCAGTGGAGCGACTA 60.394 55.000 18.83 0.00 43.72 2.59
8485 12147 8.947055 TTTAAGTAAAAAGTACTATAGCCGGG 57.053 34.615 2.18 0.00 0.00 5.73
8511 12174 9.013229 AGTACATAAACTTTTGATGCAATGAGA 57.987 29.630 0.00 0.00 0.00 3.27
8512 12175 9.630098 AAGTACATAAACTTTTGATGCAATGAG 57.370 29.630 0.00 0.00 36.26 2.90
8790 12470 8.547481 TTATCTTTTCCCCTTTGTTCTTCTTT 57.453 30.769 0.00 0.00 0.00 2.52
8866 12553 8.576442 CAATCGCTGGTTTATTATTAGGGAAAT 58.424 33.333 0.00 0.00 34.66 2.17
8867 12554 7.469456 GCAATCGCTGGTTTATTATTAGGGAAA 60.469 37.037 0.00 0.00 34.66 3.13
8868 12555 6.016610 GCAATCGCTGGTTTATTATTAGGGAA 60.017 38.462 0.00 0.00 34.66 3.97
8869 12556 5.472137 GCAATCGCTGGTTTATTATTAGGGA 59.528 40.000 0.00 0.00 35.31 4.20
8870 12557 5.699839 GCAATCGCTGGTTTATTATTAGGG 58.300 41.667 0.00 0.00 34.30 3.53
8884 12571 4.867113 GGACGACCAAAAGCAATCGCTG 62.867 54.545 0.00 0.00 41.37 5.18
8885 12572 2.804911 GGACGACCAAAAGCAATCGCT 61.805 52.381 0.00 0.00 43.04 4.93
8886 12573 0.454452 GGACGACCAAAAGCAATCGC 60.454 55.000 0.00 0.00 38.12 4.58
8887 12574 0.179225 CGGACGACCAAAAGCAATCG 60.179 55.000 4.48 0.00 40.39 3.34
8888 12575 0.872388 ACGGACGACCAAAAGCAATC 59.128 50.000 4.48 0.00 35.59 2.67
8889 12576 0.872388 GACGGACGACCAAAAGCAAT 59.128 50.000 4.48 0.00 35.59 3.56
8890 12577 0.462225 TGACGGACGACCAAAAGCAA 60.462 50.000 4.48 0.00 35.59 3.91
8891 12578 0.250124 ATGACGGACGACCAAAAGCA 60.250 50.000 4.48 0.00 35.59 3.91
8892 12579 0.442699 GATGACGGACGACCAAAAGC 59.557 55.000 4.48 0.00 35.59 3.51
8893 12580 0.713883 CGATGACGGACGACCAAAAG 59.286 55.000 4.48 0.00 35.59 2.27
8894 12581 2.817035 CGATGACGGACGACCAAAA 58.183 52.632 4.48 0.00 35.59 2.44
8895 12582 4.563630 CGATGACGGACGACCAAA 57.436 55.556 4.48 0.00 35.59 3.28
8905 12592 1.795962 GCAAAAACGCCCGATGACG 60.796 57.895 0.00 0.00 39.43 4.35
8906 12593 0.729140 CTGCAAAAACGCCCGATGAC 60.729 55.000 0.00 0.00 0.00 3.06
8907 12594 0.886938 TCTGCAAAAACGCCCGATGA 60.887 50.000 0.00 0.00 0.00 2.92
8908 12595 0.039617 TTCTGCAAAAACGCCCGATG 60.040 50.000 0.00 0.00 0.00 3.84
8909 12596 0.671251 TTTCTGCAAAAACGCCCGAT 59.329 45.000 0.00 0.00 0.00 4.18
8910 12597 0.456221 TTTTCTGCAAAAACGCCCGA 59.544 45.000 0.00 0.00 0.00 5.14
8911 12598 0.852136 CTTTTCTGCAAAAACGCCCG 59.148 50.000 0.00 0.00 30.90 6.13
8912 12599 1.934589 ACTTTTCTGCAAAAACGCCC 58.065 45.000 0.00 0.00 30.90 6.13
8913 12600 2.792674 GGTACTTTTCTGCAAAAACGCC 59.207 45.455 0.00 0.00 30.90 5.68
8914 12601 2.792674 GGGTACTTTTCTGCAAAAACGC 59.207 45.455 0.00 0.00 30.90 4.84
8915 12602 3.377439 GGGGTACTTTTCTGCAAAAACG 58.623 45.455 0.00 0.00 30.90 3.60
8916 12603 3.724374 GGGGGTACTTTTCTGCAAAAAC 58.276 45.455 0.00 0.00 30.90 2.43
8917 12604 2.362717 CGGGGGTACTTTTCTGCAAAAA 59.637 45.455 0.00 0.00 30.90 1.94
8918 12605 1.957877 CGGGGGTACTTTTCTGCAAAA 59.042 47.619 0.00 0.00 0.00 2.44
8919 12606 1.133730 ACGGGGGTACTTTTCTGCAAA 60.134 47.619 0.00 0.00 0.00 3.68
8920 12607 0.475044 ACGGGGGTACTTTTCTGCAA 59.525 50.000 0.00 0.00 0.00 4.08
8921 12608 0.475044 AACGGGGGTACTTTTCTGCA 59.525 50.000 0.00 0.00 0.00 4.41
8922 12609 1.538512 GAAACGGGGGTACTTTTCTGC 59.461 52.381 0.00 0.00 0.00 4.26
8923 12610 2.812011 CAGAAACGGGGGTACTTTTCTG 59.188 50.000 9.66 9.66 45.01 3.02
8924 12611 2.707257 TCAGAAACGGGGGTACTTTTCT 59.293 45.455 0.00 0.00 38.55 2.52
8925 12612 3.130280 TCAGAAACGGGGGTACTTTTC 57.870 47.619 0.00 0.00 0.00 2.29
8926 12613 3.801307 ATCAGAAACGGGGGTACTTTT 57.199 42.857 0.00 0.00 0.00 2.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.