Multiple sequence alignment - TraesCS7D01G203600
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G203600 | chr7D | 100.000 | 3584 | 0 | 0 | 1 | 3584 | 161526834 | 161530417 | 0.000000e+00 | 6619.0 |
1 | TraesCS7D01G203600 | chr7D | 83.867 | 1469 | 139 | 38 | 1965 | 3386 | 161495035 | 161496452 | 0.000000e+00 | 1310.0 |
2 | TraesCS7D01G203600 | chr7D | 84.084 | 622 | 62 | 22 | 941 | 1539 | 161494016 | 161494623 | 1.870000e-157 | 566.0 |
3 | TraesCS7D01G203600 | chr7B | 94.159 | 1986 | 92 | 13 | 762 | 2740 | 123806683 | 123808651 | 0.000000e+00 | 3003.0 |
4 | TraesCS7D01G203600 | chr7B | 86.195 | 1485 | 115 | 32 | 1965 | 3386 | 123802773 | 123804230 | 0.000000e+00 | 1524.0 |
5 | TraesCS7D01G203600 | chr7B | 86.133 | 649 | 69 | 10 | 137 | 777 | 123806029 | 123806664 | 0.000000e+00 | 680.0 |
6 | TraesCS7D01G203600 | chr7B | 86.550 | 342 | 29 | 9 | 917 | 1253 | 123801767 | 123802096 | 9.460000e-96 | 361.0 |
7 | TraesCS7D01G203600 | chr7B | 81.501 | 373 | 34 | 14 | 3008 | 3347 | 123808895 | 123809265 | 1.270000e-69 | 274.0 |
8 | TraesCS7D01G203600 | chr7B | 86.538 | 208 | 17 | 4 | 2753 | 2954 | 123808694 | 123808896 | 6.020000e-53 | 219.0 |
9 | TraesCS7D01G203600 | chr7B | 84.270 | 178 | 20 | 6 | 1294 | 1463 | 123802091 | 123802268 | 2.210000e-37 | 167.0 |
10 | TraesCS7D01G203600 | chr7B | 88.489 | 139 | 13 | 2 | 1 | 137 | 123804686 | 123804823 | 7.960000e-37 | 165.0 |
11 | TraesCS7D01G203600 | chr7A | 85.183 | 1478 | 138 | 25 | 1965 | 3388 | 162827520 | 162828970 | 0.000000e+00 | 1441.0 |
12 | TraesCS7D01G203600 | chr7A | 93.139 | 787 | 53 | 1 | 1964 | 2749 | 162871700 | 162872486 | 0.000000e+00 | 1153.0 |
13 | TraesCS7D01G203600 | chr7A | 93.543 | 635 | 28 | 6 | 905 | 1530 | 162852645 | 162853275 | 0.000000e+00 | 933.0 |
14 | TraesCS7D01G203600 | chr7A | 93.142 | 452 | 27 | 4 | 1523 | 1972 | 162870196 | 162870645 | 0.000000e+00 | 660.0 |
15 | TraesCS7D01G203600 | chr7A | 85.783 | 626 | 66 | 13 | 137 | 756 | 162830419 | 162831027 | 3.020000e-180 | 641.0 |
16 | TraesCS7D01G203600 | chr7A | 85.315 | 572 | 44 | 17 | 2753 | 3293 | 162872519 | 162873081 | 4.040000e-154 | 555.0 |
17 | TraesCS7D01G203600 | chr7A | 82.906 | 117 | 15 | 4 | 1 | 115 | 162829306 | 162829419 | 2.280000e-17 | 100.0 |
18 | TraesCS7D01G203600 | chrUn | 88.235 | 187 | 19 | 2 | 3397 | 3583 | 154971787 | 154971604 | 1.680000e-53 | 220.0 |
19 | TraesCS7D01G203600 | chrUn | 88.235 | 187 | 19 | 2 | 3397 | 3583 | 155054215 | 155054032 | 1.680000e-53 | 220.0 |
20 | TraesCS7D01G203600 | chrUn | 88.235 | 187 | 19 | 2 | 3397 | 3583 | 239617068 | 239617251 | 1.680000e-53 | 220.0 |
21 | TraesCS7D01G203600 | chrUn | 88.235 | 187 | 19 | 2 | 3397 | 3583 | 324368026 | 324368209 | 1.680000e-53 | 220.0 |
22 | TraesCS7D01G203600 | chrUn | 100.000 | 30 | 0 | 0 | 32 | 61 | 88580241 | 88580212 | 5.000000e-04 | 56.5 |
23 | TraesCS7D01G203600 | chrUn | 96.875 | 32 | 1 | 0 | 30 | 61 | 292906426 | 292906395 | 2.000000e-03 | 54.7 |
24 | TraesCS7D01G203600 | chrUn | 100.000 | 28 | 0 | 0 | 34 | 61 | 96242175 | 96242148 | 6.000000e-03 | 52.8 |
25 | TraesCS7D01G203600 | chr3B | 88.235 | 187 | 19 | 2 | 3397 | 3583 | 792322076 | 792322259 | 1.680000e-53 | 220.0 |
26 | TraesCS7D01G203600 | chr3B | 88.235 | 187 | 19 | 2 | 3397 | 3583 | 792408891 | 792409074 | 1.680000e-53 | 220.0 |
27 | TraesCS7D01G203600 | chr3B | 86.631 | 187 | 22 | 2 | 3397 | 3583 | 793366777 | 793366594 | 1.690000e-48 | 204.0 |
28 | TraesCS7D01G203600 | chr3B | 87.222 | 180 | 20 | 2 | 3397 | 3576 | 793417870 | 793417694 | 6.070000e-48 | 202.0 |
29 | TraesCS7D01G203600 | chr3B | 80.435 | 138 | 26 | 1 | 112 | 249 | 123055757 | 123055893 | 1.760000e-18 | 104.0 |
30 | TraesCS7D01G203600 | chr1B | 86.243 | 189 | 23 | 3 | 3397 | 3584 | 305415379 | 305415193 | 6.070000e-48 | 202.0 |
31 | TraesCS7D01G203600 | chr1B | 100.000 | 30 | 0 | 0 | 32 | 61 | 607150954 | 607150925 | 5.000000e-04 | 56.5 |
32 | TraesCS7D01G203600 | chr1A | 79.710 | 138 | 27 | 1 | 112 | 249 | 448988197 | 448988333 | 8.190000e-17 | 99.0 |
33 | TraesCS7D01G203600 | chr3A | 89.706 | 68 | 7 | 0 | 113 | 180 | 716799508 | 716799441 | 1.770000e-13 | 87.9 |
34 | TraesCS7D01G203600 | chr3D | 84.932 | 73 | 8 | 3 | 112 | 183 | 299739994 | 299739924 | 1.790000e-08 | 71.3 |
35 | TraesCS7D01G203600 | chr6B | 97.059 | 34 | 0 | 1 | 29 | 62 | 703272929 | 703272961 | 5.000000e-04 | 56.5 |
36 | TraesCS7D01G203600 | chr6D | 96.875 | 32 | 1 | 0 | 30 | 61 | 91706538 | 91706507 | 2.000000e-03 | 54.7 |
37 | TraesCS7D01G203600 | chr1D | 96.875 | 32 | 1 | 0 | 30 | 61 | 5816658 | 5816627 | 2.000000e-03 | 54.7 |
38 | TraesCS7D01G203600 | chr1D | 96.875 | 32 | 1 | 0 | 31 | 62 | 92207746 | 92207777 | 2.000000e-03 | 54.7 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G203600 | chr7D | 161526834 | 161530417 | 3583 | False | 6619.000000 | 6619 | 100.000000 | 1 | 3584 | 1 | chr7D.!!$F1 | 3583 |
1 | TraesCS7D01G203600 | chr7D | 161494016 | 161496452 | 2436 | False | 938.000000 | 1310 | 83.975500 | 941 | 3386 | 2 | chr7D.!!$F2 | 2445 |
2 | TraesCS7D01G203600 | chr7B | 123801767 | 123809265 | 7498 | False | 799.125000 | 3003 | 86.729375 | 1 | 3386 | 8 | chr7B.!!$F1 | 3385 |
3 | TraesCS7D01G203600 | chr7A | 162852645 | 162853275 | 630 | False | 933.000000 | 933 | 93.543000 | 905 | 1530 | 1 | chr7A.!!$F1 | 625 |
4 | TraesCS7D01G203600 | chr7A | 162870196 | 162873081 | 2885 | False | 789.333333 | 1153 | 90.532000 | 1523 | 3293 | 3 | chr7A.!!$F3 | 1770 |
5 | TraesCS7D01G203600 | chr7A | 162827520 | 162831027 | 3507 | False | 727.333333 | 1441 | 84.624000 | 1 | 3388 | 3 | chr7A.!!$F2 | 3387 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
382 | 4510 | 0.038983 | TCATCGGCGACAAAGTTCGA | 60.039 | 50.0 | 13.76 | 0.00 | 41.78 | 3.71 | F |
872 | 5039 | 0.178068 | GGCTGAGGTCCTATGCGAAA | 59.822 | 55.0 | 8.85 | 0.00 | 0.00 | 3.46 | F |
1407 | 5629 | 0.453793 | AGCTCTTCGACGATGACCTG | 59.546 | 55.0 | 9.19 | 2.41 | 0.00 | 4.00 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1824 | 6063 | 0.867086 | TAACGGCAAACTAACGGTGC | 59.133 | 50.0 | 0.00 | 0.0 | 37.55 | 5.01 | R |
2393 | 7699 | 0.108138 | CAAAGAGTACCGAGGGCCAG | 60.108 | 60.0 | 6.18 | 0.0 | 0.00 | 4.85 | R |
3026 | 8370 | 0.179026 | CCAGGATCAGGCCATGACAG | 60.179 | 60.0 | 5.01 | 0.0 | 41.91 | 3.51 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
38 | 2958 | 9.574516 | CTTTTGCCCCACTTTATTATATACTCT | 57.425 | 33.333 | 0.00 | 0.00 | 0.00 | 3.24 |
46 | 2966 | 9.843334 | CCACTTTATTATATACTCTCTCCGTTC | 57.157 | 37.037 | 0.00 | 0.00 | 0.00 | 3.95 |
56 | 2976 | 5.485209 | ACTCTCTCCGTTCCAAAATAAGT | 57.515 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
57 | 2977 | 5.238583 | ACTCTCTCCGTTCCAAAATAAGTG | 58.761 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
58 | 2978 | 5.221661 | ACTCTCTCCGTTCCAAAATAAGTGT | 60.222 | 40.000 | 0.00 | 0.00 | 0.00 | 3.55 |
59 | 2979 | 5.235516 | TCTCTCCGTTCCAAAATAAGTGTC | 58.764 | 41.667 | 0.00 | 0.00 | 0.00 | 3.67 |
60 | 2980 | 5.011738 | TCTCTCCGTTCCAAAATAAGTGTCT | 59.988 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
62 | 2982 | 5.699458 | TCTCCGTTCCAAAATAAGTGTCTTC | 59.301 | 40.000 | 0.00 | 0.00 | 0.00 | 2.87 |
63 | 2983 | 4.449743 | TCCGTTCCAAAATAAGTGTCTTCG | 59.550 | 41.667 | 0.00 | 0.00 | 0.00 | 3.79 |
103 | 3024 | 6.894339 | ATCGAAAACACTTATTTTGGGACT | 57.106 | 33.333 | 0.00 | 0.00 | 31.90 | 3.85 |
108 | 3029 | 6.911250 | AAACACTTATTTTGGGACTAAGGG | 57.089 | 37.500 | 0.00 | 0.00 | 33.14 | 3.95 |
124 | 3045 | 6.315642 | GGACTAAGGGAGTATAAAGCAACAAC | 59.684 | 42.308 | 0.00 | 0.00 | 39.06 | 3.32 |
143 | 4270 | 1.202830 | ACCGAACAAAGTACATGCCCA | 60.203 | 47.619 | 0.00 | 0.00 | 0.00 | 5.36 |
146 | 4273 | 3.305110 | CGAACAAAGTACATGCCCAAAC | 58.695 | 45.455 | 0.00 | 0.00 | 0.00 | 2.93 |
162 | 4289 | 3.119990 | CCCAAACGATACAATGTGGTGAC | 60.120 | 47.826 | 0.00 | 0.00 | 0.00 | 3.67 |
167 | 4294 | 2.534349 | CGATACAATGTGGTGACGTAGC | 59.466 | 50.000 | 0.00 | 0.00 | 0.00 | 3.58 |
168 | 4295 | 2.373540 | TACAATGTGGTGACGTAGCC | 57.626 | 50.000 | 0.00 | 0.00 | 0.00 | 3.93 |
180 | 4307 | 2.895404 | TGACGTAGCCCTCTTACAAAGT | 59.105 | 45.455 | 0.00 | 0.00 | 0.00 | 2.66 |
201 | 4328 | 6.015027 | AGTCGTTCTTAGGATAATCGGATG | 57.985 | 41.667 | 0.00 | 0.00 | 0.00 | 3.51 |
204 | 4331 | 4.852104 | CGTTCTTAGGATAATCGGATGACG | 59.148 | 45.833 | 0.00 | 0.00 | 46.11 | 4.35 |
207 | 4334 | 4.279922 | TCTTAGGATAATCGGATGACGCAA | 59.720 | 41.667 | 0.00 | 0.00 | 43.86 | 4.85 |
222 | 4349 | 1.271926 | ACGCAAAAGGCAAGGGACTAT | 60.272 | 47.619 | 0.00 | 0.00 | 45.17 | 2.12 |
243 | 4370 | 3.857052 | TGCTACCGAAAGATAACACAGG | 58.143 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
246 | 4373 | 4.142227 | GCTACCGAAAGATAACACAGGAGA | 60.142 | 45.833 | 0.00 | 0.00 | 0.00 | 3.71 |
252 | 4379 | 6.406400 | CCGAAAGATAACACAGGAGAGAGAAT | 60.406 | 42.308 | 0.00 | 0.00 | 0.00 | 2.40 |
255 | 4382 | 5.276440 | AGATAACACAGGAGAGAGAATGGT | 58.724 | 41.667 | 0.00 | 0.00 | 0.00 | 3.55 |
256 | 4383 | 3.692257 | AACACAGGAGAGAGAATGGTG | 57.308 | 47.619 | 0.00 | 0.00 | 0.00 | 4.17 |
285 | 4412 | 1.787847 | CCGCTGTCGATTCCACAAC | 59.212 | 57.895 | 0.00 | 0.00 | 38.10 | 3.32 |
287 | 4414 | 1.787847 | GCTGTCGATTCCACAACGG | 59.212 | 57.895 | 0.00 | 0.00 | 0.00 | 4.44 |
288 | 4415 | 0.669318 | GCTGTCGATTCCACAACGGA | 60.669 | 55.000 | 0.00 | 0.00 | 44.40 | 4.69 |
289 | 4416 | 1.068474 | CTGTCGATTCCACAACGGAC | 58.932 | 55.000 | 0.00 | 0.00 | 46.36 | 4.79 |
290 | 4417 | 0.389757 | TGTCGATTCCACAACGGACA | 59.610 | 50.000 | 0.00 | 0.00 | 46.36 | 4.02 |
291 | 4418 | 1.202545 | TGTCGATTCCACAACGGACAA | 60.203 | 47.619 | 0.00 | 0.00 | 46.36 | 3.18 |
292 | 4419 | 1.868498 | GTCGATTCCACAACGGACAAA | 59.132 | 47.619 | 0.00 | 0.00 | 46.36 | 2.83 |
293 | 4420 | 2.096417 | GTCGATTCCACAACGGACAAAG | 60.096 | 50.000 | 0.00 | 0.00 | 46.36 | 2.77 |
294 | 4421 | 2.139917 | CGATTCCACAACGGACAAAGA | 58.860 | 47.619 | 0.00 | 0.00 | 46.36 | 2.52 |
295 | 4422 | 2.096417 | CGATTCCACAACGGACAAAGAC | 60.096 | 50.000 | 0.00 | 0.00 | 46.36 | 3.01 |
296 | 4423 | 2.702592 | TTCCACAACGGACAAAGACT | 57.297 | 45.000 | 0.00 | 0.00 | 46.36 | 3.24 |
304 | 4431 | 3.536956 | ACGGACAAAGACTTTCACTCA | 57.463 | 42.857 | 0.00 | 0.00 | 0.00 | 3.41 |
318 | 4445 | 3.744238 | TCACTCAGAATCCAAACACGA | 57.256 | 42.857 | 0.00 | 0.00 | 0.00 | 4.35 |
335 | 4462 | 1.268899 | ACGAAGAGGAGTACCACAACG | 59.731 | 52.381 | 0.00 | 0.00 | 38.94 | 4.10 |
337 | 4464 | 2.163815 | CGAAGAGGAGTACCACAACGAT | 59.836 | 50.000 | 0.00 | 0.00 | 38.94 | 3.73 |
340 | 4467 | 2.492484 | AGAGGAGTACCACAACGATGTC | 59.508 | 50.000 | 0.00 | 0.00 | 37.82 | 3.06 |
349 | 4477 | 3.809832 | ACCACAACGATGTCTTCAAGAAG | 59.190 | 43.478 | 0.00 | 3.43 | 37.82 | 2.85 |
351 | 4479 | 4.151335 | CCACAACGATGTCTTCAAGAAGAG | 59.849 | 45.833 | 12.50 | 4.35 | 46.93 | 2.85 |
357 | 4485 | 4.856487 | CGATGTCTTCAAGAAGAGAGTGAC | 59.144 | 45.833 | 12.50 | 2.36 | 46.93 | 3.67 |
367 | 4495 | 3.380004 | AGAAGAGAGTGACGTCCATCATC | 59.620 | 47.826 | 14.12 | 8.09 | 0.00 | 2.92 |
368 | 4496 | 1.673400 | AGAGAGTGACGTCCATCATCG | 59.327 | 52.381 | 14.12 | 0.00 | 0.00 | 3.84 |
372 | 4500 | 2.411504 | TGACGTCCATCATCGGCGA | 61.412 | 57.895 | 13.87 | 13.87 | 37.97 | 5.54 |
378 | 4506 | 0.249120 | TCCATCATCGGCGACAAAGT | 59.751 | 50.000 | 13.76 | 0.00 | 0.00 | 2.66 |
380 | 4508 | 1.062587 | CCATCATCGGCGACAAAGTTC | 59.937 | 52.381 | 13.76 | 0.00 | 0.00 | 3.01 |
381 | 4509 | 0.999406 | ATCATCGGCGACAAAGTTCG | 59.001 | 50.000 | 13.76 | 0.00 | 42.15 | 3.95 |
382 | 4510 | 0.038983 | TCATCGGCGACAAAGTTCGA | 60.039 | 50.000 | 13.76 | 0.00 | 41.78 | 3.71 |
404 | 4532 | 0.962356 | CTTTTGCCCGACAGCTCCAT | 60.962 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
406 | 4534 | 3.664025 | TTGCCCGACAGCTCCATCG | 62.664 | 63.158 | 4.87 | 4.87 | 38.08 | 3.84 |
409 | 4537 | 2.887568 | CCGACAGCTCCATCGTGC | 60.888 | 66.667 | 9.89 | 0.00 | 36.60 | 5.34 |
426 | 4554 | 2.879233 | GCCACCACGAGGACTCCAA | 61.879 | 63.158 | 5.68 | 0.00 | 38.69 | 3.53 |
433 | 4561 | 0.318762 | ACGAGGACTCCAAGACAAGC | 59.681 | 55.000 | 0.00 | 0.00 | 0.00 | 4.01 |
445 | 4573 | 1.593209 | GACAAGCGTGACGGGTTCA | 60.593 | 57.895 | 7.25 | 0.00 | 0.00 | 3.18 |
452 | 4580 | 0.739813 | CGTGACGGGTTCAGATTCCC | 60.740 | 60.000 | 0.00 | 2.02 | 40.26 | 3.97 |
487 | 4615 | 1.592669 | ACCATGACATAGCGCGCTC | 60.593 | 57.895 | 40.23 | 24.20 | 0.00 | 5.03 |
488 | 4616 | 1.592400 | CCATGACATAGCGCGCTCA | 60.592 | 57.895 | 40.23 | 29.32 | 0.00 | 4.26 |
494 | 4622 | 2.892425 | ATAGCGCGCTCAAGCCAC | 60.892 | 61.111 | 40.23 | 0.53 | 37.91 | 5.01 |
507 | 4635 | 3.615709 | GCCACCCACTGCCAAACC | 61.616 | 66.667 | 0.00 | 0.00 | 0.00 | 3.27 |
515 | 4643 | 2.348998 | CTGCCAAACCTCTCGCCT | 59.651 | 61.111 | 0.00 | 0.00 | 0.00 | 5.52 |
540 | 4668 | 1.305381 | ACGGCCAAGAGACCTAGCT | 60.305 | 57.895 | 2.24 | 0.00 | 0.00 | 3.32 |
551 | 4679 | 1.900486 | AGACCTAGCTACCACAACCAC | 59.100 | 52.381 | 0.00 | 0.00 | 0.00 | 4.16 |
566 | 4694 | 4.854924 | CACCATGATGCCCGCCGA | 62.855 | 66.667 | 0.00 | 0.00 | 0.00 | 5.54 |
656 | 4790 | 3.202001 | CATAGTGCCAACCCGCGG | 61.202 | 66.667 | 21.04 | 21.04 | 0.00 | 6.46 |
666 | 4800 | 1.826487 | AACCCGCGGCAAGAAAAGT | 60.826 | 52.632 | 22.85 | 6.61 | 0.00 | 2.66 |
670 | 4804 | 2.561373 | GCGGCAAGAAAAGTCCGG | 59.439 | 61.111 | 0.00 | 0.00 | 41.96 | 5.14 |
680 | 4814 | 1.464997 | GAAAAGTCCGGCATCAGTCAC | 59.535 | 52.381 | 0.00 | 0.00 | 0.00 | 3.67 |
697 | 4831 | 3.071479 | GTCACCGAGGCTGAATTGTAAA | 58.929 | 45.455 | 0.00 | 0.00 | 0.00 | 2.01 |
699 | 4833 | 3.751175 | TCACCGAGGCTGAATTGTAAAAG | 59.249 | 43.478 | 0.00 | 0.00 | 0.00 | 2.27 |
702 | 4836 | 4.455877 | ACCGAGGCTGAATTGTAAAAGAAG | 59.544 | 41.667 | 0.00 | 0.00 | 0.00 | 2.85 |
758 | 4892 | 7.970061 | ACACATTATATGATGTCTTGTGTTTGC | 59.030 | 33.333 | 10.02 | 0.00 | 42.39 | 3.68 |
764 | 4898 | 0.453793 | TGTCTTGTGTTTGCCCAACG | 59.546 | 50.000 | 0.00 | 0.00 | 38.36 | 4.10 |
773 | 4939 | 5.001874 | TGTGTTTGCCCAACGTATTATGTA | 58.998 | 37.500 | 0.00 | 0.00 | 38.36 | 2.29 |
802 | 4968 | 2.465860 | AGTTAGCGCACACATGGTTA | 57.534 | 45.000 | 11.47 | 0.00 | 0.00 | 2.85 |
804 | 4970 | 3.343617 | AGTTAGCGCACACATGGTTAAT | 58.656 | 40.909 | 11.47 | 0.00 | 0.00 | 1.40 |
805 | 4971 | 4.509616 | AGTTAGCGCACACATGGTTAATA | 58.490 | 39.130 | 11.47 | 0.00 | 0.00 | 0.98 |
807 | 4973 | 5.588648 | AGTTAGCGCACACATGGTTAATAAT | 59.411 | 36.000 | 11.47 | 0.00 | 0.00 | 1.28 |
810 | 4976 | 3.315191 | GCGCACACATGGTTAATAATCCT | 59.685 | 43.478 | 0.30 | 0.00 | 0.00 | 3.24 |
851 | 5018 | 9.679721 | GCATAGTGCAAAATGAGAGACCTCAAC | 62.680 | 44.444 | 12.51 | 0.00 | 46.65 | 3.18 |
856 | 5023 | 3.464878 | TGAGAGACCTCAACAGGCT | 57.535 | 52.632 | 0.00 | 0.00 | 45.74 | 4.58 |
857 | 5024 | 0.972134 | TGAGAGACCTCAACAGGCTG | 59.028 | 55.000 | 14.16 | 14.16 | 45.74 | 4.85 |
858 | 5025 | 1.261480 | GAGAGACCTCAACAGGCTGA | 58.739 | 55.000 | 23.66 | 0.00 | 45.05 | 4.26 |
859 | 5026 | 1.204467 | GAGAGACCTCAACAGGCTGAG | 59.796 | 57.143 | 23.66 | 13.29 | 45.05 | 3.35 |
864 | 5031 | 2.370718 | CTCAACAGGCTGAGGTCCT | 58.629 | 57.895 | 23.66 | 0.00 | 39.39 | 3.85 |
865 | 5032 | 1.561643 | CTCAACAGGCTGAGGTCCTA | 58.438 | 55.000 | 23.66 | 0.00 | 39.39 | 2.94 |
866 | 5033 | 2.114616 | CTCAACAGGCTGAGGTCCTAT | 58.885 | 52.381 | 23.66 | 0.00 | 39.39 | 2.57 |
867 | 5034 | 1.833630 | TCAACAGGCTGAGGTCCTATG | 59.166 | 52.381 | 23.66 | 6.72 | 31.52 | 2.23 |
868 | 5035 | 0.543749 | AACAGGCTGAGGTCCTATGC | 59.456 | 55.000 | 23.66 | 6.97 | 31.52 | 3.14 |
869 | 5036 | 1.068753 | CAGGCTGAGGTCCTATGCG | 59.931 | 63.158 | 9.42 | 0.00 | 31.52 | 4.73 |
870 | 5037 | 1.075970 | AGGCTGAGGTCCTATGCGA | 60.076 | 57.895 | 8.85 | 0.00 | 30.79 | 5.10 |
871 | 5038 | 0.687757 | AGGCTGAGGTCCTATGCGAA | 60.688 | 55.000 | 8.85 | 0.00 | 30.79 | 4.70 |
872 | 5039 | 0.178068 | GGCTGAGGTCCTATGCGAAA | 59.822 | 55.000 | 8.85 | 0.00 | 0.00 | 3.46 |
873 | 5040 | 1.576356 | GCTGAGGTCCTATGCGAAAG | 58.424 | 55.000 | 0.00 | 0.00 | 0.00 | 2.62 |
874 | 5041 | 1.137086 | GCTGAGGTCCTATGCGAAAGA | 59.863 | 52.381 | 0.00 | 0.00 | 0.00 | 2.52 |
875 | 5042 | 2.418746 | GCTGAGGTCCTATGCGAAAGAA | 60.419 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
876 | 5043 | 3.861840 | CTGAGGTCCTATGCGAAAGAAA | 58.138 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
877 | 5044 | 4.253685 | CTGAGGTCCTATGCGAAAGAAAA | 58.746 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
878 | 5045 | 4.647611 | TGAGGTCCTATGCGAAAGAAAAA | 58.352 | 39.130 | 0.00 | 0.00 | 0.00 | 1.94 |
879 | 5046 | 4.695455 | TGAGGTCCTATGCGAAAGAAAAAG | 59.305 | 41.667 | 0.00 | 0.00 | 0.00 | 2.27 |
880 | 5047 | 4.906618 | AGGTCCTATGCGAAAGAAAAAGA | 58.093 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
881 | 5048 | 5.313712 | AGGTCCTATGCGAAAGAAAAAGAA | 58.686 | 37.500 | 0.00 | 0.00 | 0.00 | 2.52 |
882 | 5049 | 5.768164 | AGGTCCTATGCGAAAGAAAAAGAAA | 59.232 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
883 | 5050 | 6.264518 | AGGTCCTATGCGAAAGAAAAAGAAAA | 59.735 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
884 | 5051 | 6.921307 | GGTCCTATGCGAAAGAAAAAGAAAAA | 59.079 | 34.615 | 0.00 | 0.00 | 0.00 | 1.94 |
885 | 5052 | 7.598869 | GGTCCTATGCGAAAGAAAAAGAAAAAT | 59.401 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
886 | 5053 | 8.639428 | GTCCTATGCGAAAGAAAAAGAAAAATC | 58.361 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
887 | 5054 | 8.356657 | TCCTATGCGAAAGAAAAAGAAAAATCA | 58.643 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
888 | 5055 | 8.977505 | CCTATGCGAAAGAAAAAGAAAAATCAA | 58.022 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
891 | 5058 | 7.683746 | TGCGAAAGAAAAAGAAAAATCAAAGG | 58.316 | 30.769 | 0.00 | 0.00 | 0.00 | 3.11 |
892 | 5059 | 6.628856 | GCGAAAGAAAAAGAAAAATCAAAGGC | 59.371 | 34.615 | 0.00 | 0.00 | 0.00 | 4.35 |
893 | 5060 | 7.676104 | GCGAAAGAAAAAGAAAAATCAAAGGCA | 60.676 | 33.333 | 0.00 | 0.00 | 0.00 | 4.75 |
894 | 5061 | 7.635973 | CGAAAGAAAAAGAAAAATCAAAGGCAC | 59.364 | 33.333 | 0.00 | 0.00 | 0.00 | 5.01 |
895 | 5062 | 6.925610 | AGAAAAAGAAAAATCAAAGGCACC | 57.074 | 33.333 | 0.00 | 0.00 | 0.00 | 5.01 |
896 | 5063 | 5.523552 | AGAAAAAGAAAAATCAAAGGCACCG | 59.476 | 36.000 | 0.00 | 0.00 | 0.00 | 4.94 |
897 | 5064 | 4.664150 | AAAGAAAAATCAAAGGCACCGA | 57.336 | 36.364 | 0.00 | 0.00 | 0.00 | 4.69 |
898 | 5065 | 3.643159 | AGAAAAATCAAAGGCACCGAC | 57.357 | 42.857 | 0.00 | 0.00 | 0.00 | 4.79 |
899 | 5066 | 2.296190 | AGAAAAATCAAAGGCACCGACC | 59.704 | 45.455 | 0.00 | 0.00 | 0.00 | 4.79 |
900 | 5067 | 1.995376 | AAAATCAAAGGCACCGACCT | 58.005 | 45.000 | 0.00 | 0.00 | 43.91 | 3.85 |
901 | 5068 | 2.871096 | AAATCAAAGGCACCGACCTA | 57.129 | 45.000 | 0.00 | 0.00 | 39.93 | 3.08 |
1108 | 5324 | 1.639534 | CACGTCACGGTGTTCAACC | 59.360 | 57.895 | 0.35 | 0.00 | 46.60 | 3.77 |
1143 | 5362 | 3.462678 | GAGAGGGACTGGGCGGAC | 61.463 | 72.222 | 0.00 | 0.00 | 41.55 | 4.79 |
1342 | 5564 | 2.956987 | GCACCAATCTTGTGCGCT | 59.043 | 55.556 | 9.73 | 0.00 | 34.32 | 5.92 |
1407 | 5629 | 0.453793 | AGCTCTTCGACGATGACCTG | 59.546 | 55.000 | 9.19 | 2.41 | 0.00 | 4.00 |
1441 | 5670 | 2.683867 | GGCGAGCAGTAAGTCTCTCTTA | 59.316 | 50.000 | 0.00 | 0.00 | 37.56 | 2.10 |
1530 | 5767 | 4.956034 | ATAAACTCGATCGAATTCGCAG | 57.044 | 40.909 | 22.90 | 16.32 | 38.97 | 5.18 |
1540 | 5777 | 3.820689 | TCGAATTCGCAGGTCAAATTTG | 58.179 | 40.909 | 22.90 | 12.15 | 39.60 | 2.32 |
1692 | 5930 | 3.546617 | TGCGCACGTTGTATACAAAAAG | 58.453 | 40.909 | 19.63 | 15.48 | 37.63 | 2.27 |
1736 | 5974 | 5.062558 | CGATTTTCAGTAATCCGTTTACCGT | 59.937 | 40.000 | 2.80 | 0.00 | 41.01 | 4.83 |
1739 | 5977 | 6.704512 | TTTCAGTAATCCGTTTACCGTTAC | 57.295 | 37.500 | 2.80 | 0.00 | 41.01 | 2.50 |
1824 | 6063 | 2.293122 | TGACTTGGCACCAAAATCTTCG | 59.707 | 45.455 | 3.29 | 0.00 | 35.33 | 3.79 |
1885 | 6124 | 2.616510 | CGTCAGCTTTTGATCCTCCCTT | 60.617 | 50.000 | 0.00 | 0.00 | 38.29 | 3.95 |
1937 | 6176 | 9.642327 | TTTTACATTGTATAGAGACTGCGTTAA | 57.358 | 29.630 | 0.00 | 0.00 | 0.00 | 2.01 |
1949 | 6188 | 8.359060 | AGAGACTGCGTTAATTAATTCAGATC | 57.641 | 34.615 | 24.32 | 20.94 | 0.00 | 2.75 |
2038 | 7344 | 8.085909 | TCATCAAGTGTTATTACGTCTCAAAGA | 58.914 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
2195 | 7501 | 6.822073 | AAAAGATCGTTTTTACAAACCTGC | 57.178 | 33.333 | 0.34 | 0.00 | 39.43 | 4.85 |
2272 | 7578 | 0.946221 | CGACAGCAACAGACTCACCC | 60.946 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
2393 | 7699 | 3.326747 | AGTGTTCTCGAGTTAACATGGC | 58.673 | 45.455 | 19.12 | 9.46 | 37.87 | 4.40 |
2445 | 7751 | 1.518903 | GCAGTTGCTGTTGGAGTCCC | 61.519 | 60.000 | 6.74 | 0.00 | 38.21 | 4.46 |
2454 | 7760 | 1.272816 | TGTTGGAGTCCCGACTATCCA | 60.273 | 52.381 | 6.74 | 0.00 | 45.41 | 3.41 |
2599 | 7905 | 3.866651 | CCCTAGTGAGATCTGGTTGTTG | 58.133 | 50.000 | 0.00 | 0.00 | 0.00 | 3.33 |
2611 | 7917 | 2.495669 | CTGGTTGTTGTGGTTGGAGTTT | 59.504 | 45.455 | 0.00 | 0.00 | 0.00 | 2.66 |
2615 | 7921 | 1.065345 | TGTTGTGGTTGGAGTTTCCGA | 60.065 | 47.619 | 0.00 | 0.00 | 40.17 | 4.55 |
2624 | 7930 | 4.436332 | GTTGGAGTTTCCGAATACCGTAT | 58.564 | 43.478 | 0.00 | 0.00 | 40.17 | 3.06 |
2629 | 7935 | 5.450965 | GGAGTTTCCGAATACCGTATTCTCA | 60.451 | 44.000 | 22.92 | 10.76 | 41.80 | 3.27 |
2649 | 7955 | 1.351017 | ACTGATGGAATGGTGGTTCGT | 59.649 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
2652 | 7958 | 2.159382 | GATGGAATGGTGGTTCGTTGT | 58.841 | 47.619 | 0.00 | 0.00 | 0.00 | 3.32 |
2653 | 7959 | 1.313772 | TGGAATGGTGGTTCGTTGTG | 58.686 | 50.000 | 0.00 | 0.00 | 0.00 | 3.33 |
2664 | 7970 | 5.627780 | GGTGGTTCGTTGTGTCAATTAATTC | 59.372 | 40.000 | 0.00 | 0.00 | 0.00 | 2.17 |
2667 | 7973 | 5.158494 | GTTCGTTGTGTCAATTAATTCCCC | 58.842 | 41.667 | 0.00 | 0.00 | 0.00 | 4.81 |
2693 | 7999 | 1.816835 | GGTTTTCCGATCCACCTTTCC | 59.183 | 52.381 | 0.00 | 0.00 | 0.00 | 3.13 |
2698 | 8004 | 0.905357 | CCGATCCACCTTTCCTCACT | 59.095 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2750 | 8056 | 4.887615 | GGAATACCCAGCCTCTGC | 57.112 | 61.111 | 0.00 | 0.00 | 37.95 | 4.26 |
2751 | 8057 | 1.915228 | GGAATACCCAGCCTCTGCA | 59.085 | 57.895 | 0.00 | 0.00 | 41.13 | 4.41 |
2796 | 8132 | 8.017418 | TGATTGTTCCCAATAAAAGAAGTGTT | 57.983 | 30.769 | 0.00 | 0.00 | 41.37 | 3.32 |
2830 | 8167 | 6.293955 | GCTTCTTCATTTTGCTACAACCAGTA | 60.294 | 38.462 | 0.00 | 0.00 | 0.00 | 2.74 |
2838 | 8175 | 2.674796 | CTACAACCAGTAGTGCCTCC | 57.325 | 55.000 | 0.00 | 0.00 | 44.24 | 4.30 |
2860 | 8198 | 3.518590 | GAAGGATGCCAGCTTGAAAATG | 58.481 | 45.455 | 0.00 | 0.00 | 0.00 | 2.32 |
2906 | 8246 | 6.638468 | GCTGGTTCTCAAGTTAAACTTCATTG | 59.362 | 38.462 | 0.00 | 0.00 | 36.03 | 2.82 |
2908 | 8248 | 6.605594 | TGGTTCTCAAGTTAAACTTCATTGGT | 59.394 | 34.615 | 0.00 | 0.00 | 36.03 | 3.67 |
2909 | 8249 | 7.776030 | TGGTTCTCAAGTTAAACTTCATTGGTA | 59.224 | 33.333 | 0.00 | 0.00 | 36.03 | 3.25 |
2910 | 8250 | 8.290325 | GGTTCTCAAGTTAAACTTCATTGGTAG | 58.710 | 37.037 | 0.00 | 0.00 | 36.03 | 3.18 |
2911 | 8251 | 9.052759 | GTTCTCAAGTTAAACTTCATTGGTAGA | 57.947 | 33.333 | 0.00 | 0.00 | 36.03 | 2.59 |
2912 | 8252 | 8.603242 | TCTCAAGTTAAACTTCATTGGTAGAC | 57.397 | 34.615 | 0.00 | 0.00 | 36.03 | 2.59 |
2913 | 8253 | 8.208224 | TCTCAAGTTAAACTTCATTGGTAGACA | 58.792 | 33.333 | 0.00 | 0.00 | 36.03 | 3.41 |
2914 | 8254 | 8.740123 | TCAAGTTAAACTTCATTGGTAGACAA | 57.260 | 30.769 | 0.00 | 0.00 | 38.90 | 3.18 |
2915 | 8255 | 9.179909 | TCAAGTTAAACTTCATTGGTAGACAAA | 57.820 | 29.630 | 0.00 | 0.00 | 38.37 | 2.83 |
2916 | 8256 | 9.796120 | CAAGTTAAACTTCATTGGTAGACAAAA | 57.204 | 29.630 | 0.00 | 0.00 | 38.37 | 2.44 |
2948 | 8288 | 0.458543 | CAGACATCCGTCCGTCCTTG | 60.459 | 60.000 | 0.00 | 0.00 | 43.73 | 3.61 |
2957 | 8297 | 0.390472 | GTCCGTCCTTGCTCTTCCTG | 60.390 | 60.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2997 | 8341 | 3.709587 | TCTTACTTCCTGTACCTCCTGG | 58.290 | 50.000 | 0.00 | 0.00 | 39.83 | 4.45 |
3043 | 8388 | 1.276859 | TGCTGTCATGGCCTGATCCT | 61.277 | 55.000 | 3.32 | 0.00 | 35.97 | 3.24 |
3071 | 8419 | 7.201785 | GGAATTTAACAAAGGCGGATCAATCTA | 60.202 | 37.037 | 0.00 | 0.00 | 0.00 | 1.98 |
3105 | 8453 | 1.202855 | AGTCAGATGCTTGTGCCAAGT | 60.203 | 47.619 | 14.04 | 0.00 | 38.71 | 3.16 |
3107 | 8455 | 2.813754 | GTCAGATGCTTGTGCCAAGTAA | 59.186 | 45.455 | 14.04 | 6.07 | 38.71 | 2.24 |
3118 | 8466 | 6.614694 | TTGTGCCAAGTAATCCTACTAGAA | 57.385 | 37.500 | 0.00 | 0.00 | 37.39 | 2.10 |
3217 | 8586 | 8.306313 | TGCAGAAATTACTACCAAGATCTCTA | 57.694 | 34.615 | 0.00 | 0.00 | 0.00 | 2.43 |
3233 | 8604 | 6.164876 | AGATCTCTATTCTTGATGATTGCGG | 58.835 | 40.000 | 0.00 | 0.00 | 0.00 | 5.69 |
3245 | 8616 | 3.492421 | TGATTGCGGCATTCTCTTTTC | 57.508 | 42.857 | 21.33 | 3.98 | 0.00 | 2.29 |
3281 | 8658 | 3.056607 | TGCATTTAGGAAAGAAGCAAGGC | 60.057 | 43.478 | 0.00 | 0.00 | 0.00 | 4.35 |
3293 | 8670 | 7.362920 | GGAAAGAAGCAAGGCAATAGTATTTGA | 60.363 | 37.037 | 0.00 | 0.00 | 0.00 | 2.69 |
3295 | 8672 | 7.035840 | AGAAGCAAGGCAATAGTATTTGATG | 57.964 | 36.000 | 0.00 | 0.00 | 0.00 | 3.07 |
3302 | 8679 | 4.350346 | GCAATAGTATTTGATGCGTGCAA | 58.650 | 39.130 | 0.00 | 0.00 | 0.00 | 4.08 |
3359 | 8736 | 0.490017 | TCAGTCCCACCTTGACCCTA | 59.510 | 55.000 | 0.00 | 0.00 | 33.09 | 3.53 |
3373 | 8750 | 3.858135 | TGACCCTACTCTTGAGGAACTT | 58.142 | 45.455 | 2.55 | 0.00 | 41.55 | 2.66 |
3382 | 8759 | 4.023707 | ACTCTTGAGGAACTTCATTTTGCG | 60.024 | 41.667 | 2.55 | 0.00 | 41.55 | 4.85 |
3388 | 8765 | 5.049680 | TGAGGAACTTCATTTTGCGACTAAC | 60.050 | 40.000 | 0.00 | 0.00 | 41.55 | 2.34 |
3391 | 8768 | 2.482721 | ACTTCATTTTGCGACTAACCCG | 59.517 | 45.455 | 0.00 | 0.00 | 0.00 | 5.28 |
3393 | 8770 | 2.496111 | TCATTTTGCGACTAACCCGTT | 58.504 | 42.857 | 0.00 | 0.00 | 0.00 | 4.44 |
3394 | 8771 | 3.661944 | TCATTTTGCGACTAACCCGTTA | 58.338 | 40.909 | 0.00 | 0.00 | 0.00 | 3.18 |
3395 | 8772 | 4.063689 | TCATTTTGCGACTAACCCGTTAA | 58.936 | 39.130 | 0.00 | 0.00 | 0.00 | 2.01 |
3396 | 8773 | 3.876242 | TTTTGCGACTAACCCGTTAAC | 57.124 | 42.857 | 0.00 | 0.00 | 0.00 | 2.01 |
3397 | 8774 | 1.417372 | TTGCGACTAACCCGTTAACG | 58.583 | 50.000 | 20.99 | 20.99 | 39.44 | 3.18 |
3398 | 8775 | 0.595588 | TGCGACTAACCCGTTAACGA | 59.404 | 50.000 | 28.79 | 8.25 | 43.02 | 3.85 |
3399 | 8776 | 1.262882 | GCGACTAACCCGTTAACGAG | 58.737 | 55.000 | 28.79 | 18.98 | 43.02 | 4.18 |
3400 | 8777 | 1.135689 | GCGACTAACCCGTTAACGAGA | 60.136 | 52.381 | 28.79 | 9.80 | 43.02 | 4.04 |
3401 | 8778 | 2.778659 | CGACTAACCCGTTAACGAGAG | 58.221 | 52.381 | 28.79 | 19.60 | 43.02 | 3.20 |
3418 | 10462 | 4.863131 | ACGAGAGTGGTTTTTAATAGCTCG | 59.137 | 41.667 | 0.00 | 0.00 | 46.97 | 5.03 |
3433 | 10477 | 1.742768 | CTCGAGCTCCATGGTACCC | 59.257 | 63.158 | 12.58 | 0.00 | 0.00 | 3.69 |
3445 | 10489 | 2.345782 | TGGTACCCCCATGAACAGTA | 57.654 | 50.000 | 10.07 | 0.00 | 38.72 | 2.74 |
3449 | 10493 | 3.053917 | GGTACCCCCATGAACAGTACAAT | 60.054 | 47.826 | 0.00 | 0.00 | 35.98 | 2.71 |
3450 | 10494 | 3.366052 | ACCCCCATGAACAGTACAATC | 57.634 | 47.619 | 0.00 | 0.00 | 0.00 | 2.67 |
3451 | 10495 | 2.288666 | CCCCCATGAACAGTACAATCG | 58.711 | 52.381 | 0.00 | 0.00 | 0.00 | 3.34 |
3454 | 10498 | 4.006989 | CCCCATGAACAGTACAATCGAAA | 58.993 | 43.478 | 0.00 | 0.00 | 0.00 | 3.46 |
3455 | 10499 | 4.457603 | CCCCATGAACAGTACAATCGAAAA | 59.542 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
3456 | 10500 | 5.125417 | CCCCATGAACAGTACAATCGAAAAT | 59.875 | 40.000 | 0.00 | 0.00 | 0.00 | 1.82 |
3457 | 10501 | 6.317642 | CCCCATGAACAGTACAATCGAAAATA | 59.682 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
3458 | 10502 | 7.013274 | CCCCATGAACAGTACAATCGAAAATAT | 59.987 | 37.037 | 0.00 | 0.00 | 0.00 | 1.28 |
3459 | 10503 | 8.405531 | CCCATGAACAGTACAATCGAAAATATT | 58.594 | 33.333 | 0.00 | 0.00 | 0.00 | 1.28 |
3490 | 10534 | 9.599866 | AAAAAGATCCGAAAATTCTGAAACTTT | 57.400 | 25.926 | 0.00 | 12.41 | 35.30 | 2.66 |
3491 | 10535 | 8.579682 | AAAGATCCGAAAATTCTGAAACTTTG | 57.420 | 30.769 | 15.00 | 0.00 | 34.11 | 2.77 |
3492 | 10536 | 7.277174 | AGATCCGAAAATTCTGAAACTTTGT | 57.723 | 32.000 | 0.00 | 0.00 | 0.00 | 2.83 |
3493 | 10537 | 7.141363 | AGATCCGAAAATTCTGAAACTTTGTG | 58.859 | 34.615 | 0.00 | 0.00 | 0.00 | 3.33 |
3494 | 10538 | 5.587289 | TCCGAAAATTCTGAAACTTTGTGG | 58.413 | 37.500 | 0.00 | 2.90 | 0.00 | 4.17 |
3495 | 10539 | 4.744631 | CCGAAAATTCTGAAACTTTGTGGG | 59.255 | 41.667 | 0.00 | 0.00 | 0.00 | 4.61 |
3496 | 10540 | 5.451242 | CCGAAAATTCTGAAACTTTGTGGGA | 60.451 | 40.000 | 0.00 | 0.00 | 0.00 | 4.37 |
3497 | 10541 | 6.215845 | CGAAAATTCTGAAACTTTGTGGGAT | 58.784 | 36.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3498 | 10542 | 6.701400 | CGAAAATTCTGAAACTTTGTGGGATT | 59.299 | 34.615 | 0.00 | 0.00 | 0.00 | 3.01 |
3499 | 10543 | 7.306749 | CGAAAATTCTGAAACTTTGTGGGATTG | 60.307 | 37.037 | 0.00 | 0.00 | 0.00 | 2.67 |
3500 | 10544 | 6.729690 | AATTCTGAAACTTTGTGGGATTGA | 57.270 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
3501 | 10545 | 6.923199 | ATTCTGAAACTTTGTGGGATTGAT | 57.077 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
3502 | 10546 | 6.729690 | TTCTGAAACTTTGTGGGATTGATT | 57.270 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
3503 | 10547 | 7.831691 | TTCTGAAACTTTGTGGGATTGATTA | 57.168 | 32.000 | 0.00 | 0.00 | 0.00 | 1.75 |
3504 | 10548 | 8.421249 | TTCTGAAACTTTGTGGGATTGATTAT | 57.579 | 30.769 | 0.00 | 0.00 | 0.00 | 1.28 |
3505 | 10549 | 7.829725 | TCTGAAACTTTGTGGGATTGATTATG | 58.170 | 34.615 | 0.00 | 0.00 | 0.00 | 1.90 |
3506 | 10550 | 7.669304 | TCTGAAACTTTGTGGGATTGATTATGA | 59.331 | 33.333 | 0.00 | 0.00 | 0.00 | 2.15 |
3508 | 10552 | 6.530019 | AACTTTGTGGGATTGATTATGACC | 57.470 | 37.500 | 0.00 | 0.00 | 0.00 | 4.02 |
3509 | 10553 | 5.579047 | ACTTTGTGGGATTGATTATGACCA | 58.421 | 37.500 | 0.00 | 0.00 | 0.00 | 4.02 |
3510 | 10554 | 6.015918 | ACTTTGTGGGATTGATTATGACCAA | 58.984 | 36.000 | 0.00 | 0.00 | 0.00 | 3.67 |
3512 | 10556 | 7.180766 | ACTTTGTGGGATTGATTATGACCAAAT | 59.819 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
3513 | 10557 | 7.493499 | TTGTGGGATTGATTATGACCAAATT | 57.507 | 32.000 | 0.00 | 0.00 | 0.00 | 1.82 |
3514 | 10558 | 7.493499 | TGTGGGATTGATTATGACCAAATTT | 57.507 | 32.000 | 0.00 | 0.00 | 0.00 | 1.82 |
3515 | 10559 | 7.915930 | TGTGGGATTGATTATGACCAAATTTT | 58.084 | 30.769 | 0.00 | 0.00 | 0.00 | 1.82 |
3516 | 10560 | 7.823310 | TGTGGGATTGATTATGACCAAATTTTG | 59.177 | 33.333 | 1.99 | 1.99 | 0.00 | 2.44 |
3517 | 10561 | 7.823799 | GTGGGATTGATTATGACCAAATTTTGT | 59.176 | 33.333 | 8.26 | 0.00 | 0.00 | 2.83 |
3518 | 10562 | 9.040259 | TGGGATTGATTATGACCAAATTTTGTA | 57.960 | 29.630 | 8.26 | 0.00 | 0.00 | 2.41 |
3519 | 10563 | 9.533253 | GGGATTGATTATGACCAAATTTTGTAG | 57.467 | 33.333 | 8.26 | 0.00 | 0.00 | 2.74 |
3520 | 10564 | 9.533253 | GGATTGATTATGACCAAATTTTGTAGG | 57.467 | 33.333 | 8.26 | 0.00 | 0.00 | 3.18 |
3523 | 10567 | 7.319646 | TGATTATGACCAAATTTTGTAGGTGC | 58.680 | 34.615 | 8.26 | 0.00 | 33.77 | 5.01 |
3524 | 10568 | 6.909550 | TTATGACCAAATTTTGTAGGTGCT | 57.090 | 33.333 | 8.26 | 0.00 | 33.77 | 4.40 |
3525 | 10569 | 5.806654 | ATGACCAAATTTTGTAGGTGCTT | 57.193 | 34.783 | 8.26 | 0.00 | 33.77 | 3.91 |
3526 | 10570 | 4.942852 | TGACCAAATTTTGTAGGTGCTTG | 58.057 | 39.130 | 8.26 | 0.00 | 33.77 | 4.01 |
3527 | 10571 | 3.727726 | ACCAAATTTTGTAGGTGCTTGC | 58.272 | 40.909 | 8.26 | 0.00 | 32.04 | 4.01 |
3528 | 10572 | 3.133721 | ACCAAATTTTGTAGGTGCTTGCA | 59.866 | 39.130 | 8.26 | 0.00 | 32.04 | 4.08 |
3529 | 10573 | 4.125703 | CCAAATTTTGTAGGTGCTTGCAA | 58.874 | 39.130 | 8.26 | 0.00 | 0.00 | 4.08 |
3530 | 10574 | 4.574013 | CCAAATTTTGTAGGTGCTTGCAAA | 59.426 | 37.500 | 0.00 | 0.00 | 0.00 | 3.68 |
3532 | 10576 | 6.238703 | CCAAATTTTGTAGGTGCTTGCAAATT | 60.239 | 34.615 | 0.00 | 0.00 | 31.99 | 1.82 |
3533 | 10577 | 6.940831 | AATTTTGTAGGTGCTTGCAAATTT | 57.059 | 29.167 | 0.00 | 0.00 | 31.99 | 1.82 |
3534 | 10578 | 6.940831 | ATTTTGTAGGTGCTTGCAAATTTT | 57.059 | 29.167 | 0.00 | 0.00 | 31.99 | 1.82 |
3535 | 10579 | 6.749923 | TTTTGTAGGTGCTTGCAAATTTTT | 57.250 | 29.167 | 0.00 | 0.00 | 31.99 | 1.94 |
3536 | 10580 | 5.731599 | TTGTAGGTGCTTGCAAATTTTTG | 57.268 | 34.783 | 0.00 | 0.00 | 41.03 | 2.44 |
3537 | 10581 | 4.764172 | TGTAGGTGCTTGCAAATTTTTGT | 58.236 | 34.783 | 0.00 | 0.00 | 40.24 | 2.83 |
3538 | 10582 | 4.569966 | TGTAGGTGCTTGCAAATTTTTGTG | 59.430 | 37.500 | 0.00 | 0.00 | 40.24 | 3.33 |
3539 | 10583 | 3.608796 | AGGTGCTTGCAAATTTTTGTGT | 58.391 | 36.364 | 0.00 | 0.00 | 40.24 | 3.72 |
3541 | 10585 | 3.242706 | GGTGCTTGCAAATTTTTGTGTCC | 60.243 | 43.478 | 0.00 | 0.00 | 40.24 | 4.02 |
3542 | 10586 | 3.373439 | GTGCTTGCAAATTTTTGTGTCCA | 59.627 | 39.130 | 0.00 | 0.00 | 40.24 | 4.02 |
3544 | 10588 | 4.456911 | TGCTTGCAAATTTTTGTGTCCAAA | 59.543 | 33.333 | 0.00 | 0.00 | 40.24 | 3.28 |
3545 | 10589 | 5.125097 | TGCTTGCAAATTTTTGTGTCCAAAT | 59.875 | 32.000 | 0.00 | 0.00 | 40.14 | 2.32 |
3547 | 10591 | 7.148188 | TGCTTGCAAATTTTTGTGTCCAAATAA | 60.148 | 29.630 | 0.00 | 0.00 | 40.14 | 1.40 |
3550 | 10594 | 8.218338 | TGCAAATTTTTGTGTCCAAATAACAT | 57.782 | 26.923 | 5.05 | 0.00 | 40.14 | 2.71 |
3551 | 10595 | 8.680903 | TGCAAATTTTTGTGTCCAAATAACATT | 58.319 | 25.926 | 5.05 | 0.00 | 40.14 | 2.71 |
3552 | 10596 | 9.513727 | GCAAATTTTTGTGTCCAAATAACATTT | 57.486 | 25.926 | 5.05 | 0.00 | 40.14 | 2.32 |
3558 | 10602 | 9.757227 | TTTTGTGTCCAAATAACATTTTAGGAG | 57.243 | 29.630 | 0.00 | 0.00 | 40.14 | 3.69 |
3559 | 10603 | 6.919721 | TGTGTCCAAATAACATTTTAGGAGC | 58.080 | 36.000 | 0.00 | 0.00 | 0.00 | 4.70 |
3560 | 10604 | 6.719370 | TGTGTCCAAATAACATTTTAGGAGCT | 59.281 | 34.615 | 0.00 | 0.00 | 0.00 | 4.09 |
3563 | 10607 | 7.615365 | TGTCCAAATAACATTTTAGGAGCTCAT | 59.385 | 33.333 | 17.19 | 11.85 | 0.00 | 2.90 |
3564 | 10608 | 9.120538 | GTCCAAATAACATTTTAGGAGCTCATA | 57.879 | 33.333 | 17.19 | 10.57 | 0.00 | 2.15 |
3565 | 10609 | 9.120538 | TCCAAATAACATTTTAGGAGCTCATAC | 57.879 | 33.333 | 17.19 | 0.00 | 0.00 | 2.39 |
3566 | 10610 | 8.902806 | CCAAATAACATTTTAGGAGCTCATACA | 58.097 | 33.333 | 17.19 | 2.54 | 0.00 | 2.29 |
3567 | 10611 | 9.941664 | CAAATAACATTTTAGGAGCTCATACAG | 57.058 | 33.333 | 17.19 | 5.17 | 0.00 | 2.74 |
3569 | 10613 | 9.905713 | AATAACATTTTAGGAGCTCATACAGAA | 57.094 | 29.630 | 17.19 | 8.13 | 0.00 | 3.02 |
3570 | 10614 | 9.905713 | ATAACATTTTAGGAGCTCATACAGAAA | 57.094 | 29.630 | 17.19 | 10.81 | 0.00 | 2.52 |
3572 | 10616 | 8.814038 | ACATTTTAGGAGCTCATACAGAAAAT | 57.186 | 30.769 | 17.19 | 13.90 | 0.00 | 1.82 |
3573 | 10617 | 9.905713 | ACATTTTAGGAGCTCATACAGAAAATA | 57.094 | 29.630 | 17.19 | 0.00 | 0.00 | 1.40 |
3576 | 10620 | 9.733556 | TTTTAGGAGCTCATACAGAAAATAACA | 57.266 | 29.630 | 17.19 | 0.00 | 0.00 | 2.41 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
1 | 2 | 0.958822 | GGGCAAAAGCCTTTCGAGAA | 59.041 | 50.000 | 6.45 | 0.00 | 0.00 | 2.87 |
2 | 3 | 0.893727 | GGGGCAAAAGCCTTTCGAGA | 60.894 | 55.000 | 6.45 | 0.00 | 0.00 | 4.04 |
4 | 5 | 1.152652 | TGGGGCAAAAGCCTTTCGA | 60.153 | 52.632 | 6.45 | 0.00 | 0.00 | 3.71 |
5 | 6 | 1.006220 | GTGGGGCAAAAGCCTTTCG | 60.006 | 57.895 | 6.45 | 0.00 | 0.00 | 3.46 |
6 | 7 | 0.758734 | AAGTGGGGCAAAAGCCTTTC | 59.241 | 50.000 | 6.45 | 0.00 | 0.00 | 2.62 |
19 | 2939 | 8.350852 | ACGGAGAGAGTATATAATAAAGTGGG | 57.649 | 38.462 | 0.00 | 0.00 | 0.00 | 4.61 |
38 | 2958 | 5.223449 | AGACACTTATTTTGGAACGGAGA | 57.777 | 39.130 | 0.00 | 0.00 | 0.00 | 3.71 |
46 | 2966 | 7.584987 | ACTTTGATCGAAGACACTTATTTTGG | 58.415 | 34.615 | 26.43 | 0.00 | 42.51 | 3.28 |
53 | 2973 | 6.281405 | AGTACAACTTTGATCGAAGACACTT | 58.719 | 36.000 | 26.43 | 9.60 | 42.51 | 3.16 |
54 | 2974 | 5.844004 | AGTACAACTTTGATCGAAGACACT | 58.156 | 37.500 | 26.43 | 18.49 | 42.51 | 3.55 |
55 | 2975 | 7.633361 | TTAGTACAACTTTGATCGAAGACAC | 57.367 | 36.000 | 26.43 | 16.95 | 42.51 | 3.67 |
56 | 2976 | 8.827177 | ATTTAGTACAACTTTGATCGAAGACA | 57.173 | 30.769 | 26.43 | 7.69 | 42.51 | 3.41 |
57 | 2977 | 8.102716 | CGATTTAGTACAACTTTGATCGAAGAC | 58.897 | 37.037 | 26.43 | 14.97 | 42.51 | 3.01 |
58 | 2978 | 8.024865 | TCGATTTAGTACAACTTTGATCGAAGA | 58.975 | 33.333 | 26.43 | 3.89 | 38.19 | 2.87 |
59 | 2979 | 8.169839 | TCGATTTAGTACAACTTTGATCGAAG | 57.830 | 34.615 | 19.46 | 19.46 | 38.19 | 3.79 |
60 | 2980 | 8.523523 | TTCGATTTAGTACAACTTTGATCGAA | 57.476 | 30.769 | 19.36 | 19.36 | 42.51 | 3.71 |
62 | 2982 | 9.037417 | GTTTTCGATTTAGTACAACTTTGATCG | 57.963 | 33.333 | 0.00 | 10.51 | 35.92 | 3.69 |
63 | 2983 | 9.872757 | TGTTTTCGATTTAGTACAACTTTGATC | 57.127 | 29.630 | 0.00 | 0.00 | 0.00 | 2.92 |
103 | 3024 | 5.046448 | TCGGTTGTTGCTTTATACTCCCTTA | 60.046 | 40.000 | 0.00 | 0.00 | 0.00 | 2.69 |
108 | 3029 | 5.600908 | TGTTCGGTTGTTGCTTTATACTC | 57.399 | 39.130 | 0.00 | 0.00 | 0.00 | 2.59 |
124 | 3045 | 1.529226 | TGGGCATGTACTTTGTTCGG | 58.471 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
143 | 4270 | 3.395639 | ACGTCACCACATTGTATCGTTT | 58.604 | 40.909 | 0.00 | 0.00 | 0.00 | 3.60 |
146 | 4273 | 2.534349 | GCTACGTCACCACATTGTATCG | 59.466 | 50.000 | 0.00 | 0.00 | 0.00 | 2.92 |
162 | 4289 | 2.094854 | ACGACTTTGTAAGAGGGCTACG | 60.095 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
167 | 4294 | 5.047519 | TCCTAAGAACGACTTTGTAAGAGGG | 60.048 | 44.000 | 0.00 | 0.00 | 39.72 | 4.30 |
168 | 4295 | 6.022163 | TCCTAAGAACGACTTTGTAAGAGG | 57.978 | 41.667 | 0.00 | 0.00 | 39.72 | 3.69 |
180 | 4307 | 5.334646 | CGTCATCCGATTATCCTAAGAACGA | 60.335 | 44.000 | 0.00 | 0.00 | 39.56 | 3.85 |
201 | 4328 | 1.172812 | AGTCCCTTGCCTTTTGCGTC | 61.173 | 55.000 | 0.00 | 0.00 | 45.60 | 5.19 |
204 | 4331 | 1.134995 | GCATAGTCCCTTGCCTTTTGC | 60.135 | 52.381 | 0.00 | 0.00 | 41.77 | 3.68 |
207 | 4334 | 2.092375 | GGTAGCATAGTCCCTTGCCTTT | 60.092 | 50.000 | 0.00 | 0.00 | 39.72 | 3.11 |
222 | 4349 | 3.512329 | TCCTGTGTTATCTTTCGGTAGCA | 59.488 | 43.478 | 0.00 | 0.00 | 0.00 | 3.49 |
243 | 4370 | 2.275318 | CGCTTTCCACCATTCTCTCTC | 58.725 | 52.381 | 0.00 | 0.00 | 0.00 | 3.20 |
246 | 4373 | 1.673033 | CGACGCTTTCCACCATTCTCT | 60.673 | 52.381 | 0.00 | 0.00 | 0.00 | 3.10 |
285 | 4412 | 3.717707 | TCTGAGTGAAAGTCTTTGTCCG | 58.282 | 45.455 | 1.60 | 0.00 | 37.14 | 4.79 |
287 | 4414 | 5.760253 | TGGATTCTGAGTGAAAGTCTTTGTC | 59.240 | 40.000 | 1.60 | 0.00 | 38.29 | 3.18 |
288 | 4415 | 5.684704 | TGGATTCTGAGTGAAAGTCTTTGT | 58.315 | 37.500 | 1.60 | 0.00 | 38.29 | 2.83 |
289 | 4416 | 6.624352 | TTGGATTCTGAGTGAAAGTCTTTG | 57.376 | 37.500 | 1.60 | 0.00 | 38.29 | 2.77 |
290 | 4417 | 6.603201 | TGTTTGGATTCTGAGTGAAAGTCTTT | 59.397 | 34.615 | 0.00 | 0.00 | 38.29 | 2.52 |
291 | 4418 | 6.038714 | GTGTTTGGATTCTGAGTGAAAGTCTT | 59.961 | 38.462 | 0.00 | 0.00 | 38.29 | 3.01 |
292 | 4419 | 5.529060 | GTGTTTGGATTCTGAGTGAAAGTCT | 59.471 | 40.000 | 0.00 | 0.00 | 38.29 | 3.24 |
293 | 4420 | 5.559035 | CGTGTTTGGATTCTGAGTGAAAGTC | 60.559 | 44.000 | 0.00 | 0.00 | 38.29 | 3.01 |
294 | 4421 | 4.273480 | CGTGTTTGGATTCTGAGTGAAAGT | 59.727 | 41.667 | 0.00 | 0.00 | 38.29 | 2.66 |
295 | 4422 | 4.511454 | TCGTGTTTGGATTCTGAGTGAAAG | 59.489 | 41.667 | 0.00 | 0.00 | 38.29 | 2.62 |
296 | 4423 | 4.447290 | TCGTGTTTGGATTCTGAGTGAAA | 58.553 | 39.130 | 0.00 | 0.00 | 38.29 | 2.69 |
304 | 4431 | 3.325135 | ACTCCTCTTCGTGTTTGGATTCT | 59.675 | 43.478 | 0.00 | 0.00 | 0.00 | 2.40 |
318 | 4445 | 2.897969 | ACATCGTTGTGGTACTCCTCTT | 59.102 | 45.455 | 0.00 | 0.00 | 33.85 | 2.85 |
335 | 4462 | 4.856487 | CGTCACTCTCTTCTTGAAGACATC | 59.144 | 45.833 | 8.80 | 0.00 | 0.00 | 3.06 |
337 | 4464 | 3.632604 | ACGTCACTCTCTTCTTGAAGACA | 59.367 | 43.478 | 8.80 | 0.00 | 0.00 | 3.41 |
340 | 4467 | 3.004839 | TGGACGTCACTCTCTTCTTGAAG | 59.995 | 47.826 | 18.91 | 4.13 | 0.00 | 3.02 |
349 | 4477 | 1.268794 | CCGATGATGGACGTCACTCTC | 60.269 | 57.143 | 18.91 | 8.27 | 34.46 | 3.20 |
351 | 4479 | 0.872021 | GCCGATGATGGACGTCACTC | 60.872 | 60.000 | 18.91 | 13.27 | 34.46 | 3.51 |
357 | 4485 | 1.081556 | TTTGTCGCCGATGATGGACG | 61.082 | 55.000 | 0.00 | 0.00 | 32.17 | 4.79 |
367 | 4495 | 1.154654 | GCTTCGAACTTTGTCGCCG | 60.155 | 57.895 | 0.00 | 0.00 | 40.88 | 6.46 |
368 | 4496 | 0.586802 | AAGCTTCGAACTTTGTCGCC | 59.413 | 50.000 | 0.00 | 0.00 | 40.88 | 5.54 |
372 | 4500 | 2.481276 | GGGCAAAAGCTTCGAACTTTGT | 60.481 | 45.455 | 19.44 | 11.19 | 37.42 | 2.83 |
378 | 4506 | 0.816018 | TGTCGGGCAAAAGCTTCGAA | 60.816 | 50.000 | 8.56 | 0.00 | 0.00 | 3.71 |
380 | 4508 | 1.207593 | CTGTCGGGCAAAAGCTTCG | 59.792 | 57.895 | 0.00 | 0.00 | 0.00 | 3.79 |
381 | 4509 | 1.081175 | GCTGTCGGGCAAAAGCTTC | 60.081 | 57.895 | 0.00 | 0.00 | 32.82 | 3.86 |
382 | 4510 | 1.518903 | GAGCTGTCGGGCAAAAGCTT | 61.519 | 55.000 | 5.40 | 0.00 | 45.74 | 3.74 |
394 | 4522 | 2.103042 | GTGGCACGATGGAGCTGTC | 61.103 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
398 | 4526 | 3.127533 | GTGGTGGCACGATGGAGC | 61.128 | 66.667 | 12.17 | 0.00 | 0.00 | 4.70 |
406 | 4534 | 2.048127 | GAGTCCTCGTGGTGGCAC | 60.048 | 66.667 | 9.70 | 9.70 | 34.23 | 5.01 |
409 | 4537 | 1.185618 | TCTTGGAGTCCTCGTGGTGG | 61.186 | 60.000 | 11.33 | 0.00 | 34.23 | 4.61 |
426 | 4554 | 1.300697 | GAACCCGTCACGCTTGTCT | 60.301 | 57.895 | 0.00 | 0.00 | 0.00 | 3.41 |
433 | 4561 | 0.739813 | GGGAATCTGAACCCGTCACG | 60.740 | 60.000 | 7.37 | 0.00 | 36.56 | 4.35 |
445 | 4573 | 2.255406 | CTGATCCGGATCTGGGAATCT | 58.745 | 52.381 | 37.39 | 6.27 | 38.60 | 2.40 |
452 | 4580 | 0.531532 | GGTGCACTGATCCGGATCTG | 60.532 | 60.000 | 36.30 | 36.30 | 40.99 | 2.90 |
494 | 4622 | 1.672356 | CGAGAGGTTTGGCAGTGGG | 60.672 | 63.158 | 0.00 | 0.00 | 0.00 | 4.61 |
499 | 4627 | 2.032528 | CAGGCGAGAGGTTTGGCA | 59.967 | 61.111 | 0.00 | 0.00 | 38.21 | 4.92 |
540 | 4668 | 1.615651 | GGCATCATGGTGGTTGTGGTA | 60.616 | 52.381 | 8.33 | 0.00 | 0.00 | 3.25 |
551 | 4679 | 3.282157 | CTTCGGCGGGCATCATGG | 61.282 | 66.667 | 7.21 | 0.00 | 0.00 | 3.66 |
566 | 4694 | 4.699522 | GGCGGTCCGTTGGCTCTT | 62.700 | 66.667 | 13.94 | 0.00 | 0.00 | 2.85 |
572 | 4700 | 2.742372 | CTGGAAGGCGGTCCGTTG | 60.742 | 66.667 | 13.94 | 0.00 | 40.96 | 4.10 |
600 | 4733 | 1.141665 | CTCGTGGCATGGATGTCGA | 59.858 | 57.895 | 6.90 | 0.13 | 34.48 | 4.20 |
603 | 4736 | 0.543277 | ATGTCTCGTGGCATGGATGT | 59.457 | 50.000 | 3.37 | 0.00 | 0.00 | 3.06 |
605 | 4738 | 0.249615 | CGATGTCTCGTGGCATGGAT | 60.250 | 55.000 | 9.64 | 0.00 | 40.07 | 3.41 |
628 | 4761 | 3.272334 | CACTATGAAGCGGGCGGC | 61.272 | 66.667 | 9.26 | 9.26 | 44.05 | 6.53 |
656 | 4790 | 0.881118 | TGATGCCGGACTTTTCTTGC | 59.119 | 50.000 | 5.05 | 0.00 | 0.00 | 4.01 |
659 | 4793 | 1.347707 | TGACTGATGCCGGACTTTTCT | 59.652 | 47.619 | 5.05 | 0.00 | 0.00 | 2.52 |
666 | 4800 | 2.678580 | TCGGTGACTGATGCCGGA | 60.679 | 61.111 | 5.05 | 0.00 | 44.97 | 5.14 |
670 | 4804 | 1.812922 | CAGCCTCGGTGACTGATGC | 60.813 | 63.158 | 12.91 | 12.91 | 33.10 | 3.91 |
680 | 4814 | 4.695455 | TCTTCTTTTACAATTCAGCCTCGG | 59.305 | 41.667 | 0.00 | 0.00 | 0.00 | 4.63 |
699 | 4833 | 9.900710 | AACATCGTGTACTTGATCTATATCTTC | 57.099 | 33.333 | 0.00 | 0.00 | 32.93 | 2.87 |
709 | 4843 | 9.228636 | GTGTTTTAAAAACATCGTGTACTTGAT | 57.771 | 29.630 | 1.31 | 0.00 | 32.23 | 2.57 |
756 | 4890 | 6.768381 | TCATTCAATACATAATACGTTGGGCA | 59.232 | 34.615 | 0.00 | 0.00 | 0.00 | 5.36 |
773 | 4939 | 4.875536 | TGTGTGCGCTAACTATCATTCAAT | 59.124 | 37.500 | 9.73 | 0.00 | 0.00 | 2.57 |
851 | 5018 | 1.068753 | CGCATAGGACCTCAGCCTG | 59.931 | 63.158 | 0.00 | 0.00 | 36.96 | 4.85 |
852 | 5019 | 0.687757 | TTCGCATAGGACCTCAGCCT | 60.688 | 55.000 | 0.00 | 0.00 | 39.56 | 4.58 |
853 | 5020 | 0.178068 | TTTCGCATAGGACCTCAGCC | 59.822 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
854 | 5021 | 1.137086 | TCTTTCGCATAGGACCTCAGC | 59.863 | 52.381 | 0.00 | 2.18 | 0.00 | 4.26 |
855 | 5022 | 3.526931 | TTCTTTCGCATAGGACCTCAG | 57.473 | 47.619 | 0.00 | 0.00 | 0.00 | 3.35 |
856 | 5023 | 3.973206 | TTTCTTTCGCATAGGACCTCA | 57.027 | 42.857 | 0.00 | 0.00 | 0.00 | 3.86 |
857 | 5024 | 4.935808 | TCTTTTTCTTTCGCATAGGACCTC | 59.064 | 41.667 | 0.00 | 0.00 | 0.00 | 3.85 |
858 | 5025 | 4.906618 | TCTTTTTCTTTCGCATAGGACCT | 58.093 | 39.130 | 0.00 | 0.00 | 0.00 | 3.85 |
859 | 5026 | 5.622770 | TTCTTTTTCTTTCGCATAGGACC | 57.377 | 39.130 | 0.00 | 0.00 | 0.00 | 4.46 |
860 | 5027 | 7.924103 | TTTTTCTTTTTCTTTCGCATAGGAC | 57.076 | 32.000 | 0.00 | 0.00 | 0.00 | 3.85 |
861 | 5028 | 8.356657 | TGATTTTTCTTTTTCTTTCGCATAGGA | 58.643 | 29.630 | 0.00 | 0.00 | 0.00 | 2.94 |
862 | 5029 | 8.519492 | TGATTTTTCTTTTTCTTTCGCATAGG | 57.481 | 30.769 | 0.00 | 0.00 | 0.00 | 2.57 |
865 | 5032 | 8.337532 | CCTTTGATTTTTCTTTTTCTTTCGCAT | 58.662 | 29.630 | 0.00 | 0.00 | 0.00 | 4.73 |
866 | 5033 | 7.676104 | GCCTTTGATTTTTCTTTTTCTTTCGCA | 60.676 | 33.333 | 0.00 | 0.00 | 0.00 | 5.10 |
867 | 5034 | 6.628856 | GCCTTTGATTTTTCTTTTTCTTTCGC | 59.371 | 34.615 | 0.00 | 0.00 | 0.00 | 4.70 |
868 | 5035 | 7.635973 | GTGCCTTTGATTTTTCTTTTTCTTTCG | 59.364 | 33.333 | 0.00 | 0.00 | 0.00 | 3.46 |
869 | 5036 | 7.910162 | GGTGCCTTTGATTTTTCTTTTTCTTTC | 59.090 | 33.333 | 0.00 | 0.00 | 0.00 | 2.62 |
870 | 5037 | 7.413988 | CGGTGCCTTTGATTTTTCTTTTTCTTT | 60.414 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
871 | 5038 | 6.037062 | CGGTGCCTTTGATTTTTCTTTTTCTT | 59.963 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
872 | 5039 | 5.523552 | CGGTGCCTTTGATTTTTCTTTTTCT | 59.476 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
873 | 5040 | 5.522097 | TCGGTGCCTTTGATTTTTCTTTTTC | 59.478 | 36.000 | 0.00 | 0.00 | 0.00 | 2.29 |
874 | 5041 | 5.293324 | GTCGGTGCCTTTGATTTTTCTTTTT | 59.707 | 36.000 | 0.00 | 0.00 | 0.00 | 1.94 |
875 | 5042 | 4.808895 | GTCGGTGCCTTTGATTTTTCTTTT | 59.191 | 37.500 | 0.00 | 0.00 | 0.00 | 2.27 |
876 | 5043 | 4.368315 | GTCGGTGCCTTTGATTTTTCTTT | 58.632 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
877 | 5044 | 3.243737 | GGTCGGTGCCTTTGATTTTTCTT | 60.244 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
878 | 5045 | 2.296190 | GGTCGGTGCCTTTGATTTTTCT | 59.704 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
879 | 5046 | 2.296190 | AGGTCGGTGCCTTTGATTTTTC | 59.704 | 45.455 | 0.00 | 0.00 | 34.71 | 2.29 |
880 | 5047 | 2.316108 | AGGTCGGTGCCTTTGATTTTT | 58.684 | 42.857 | 0.00 | 0.00 | 34.71 | 1.94 |
881 | 5048 | 1.995376 | AGGTCGGTGCCTTTGATTTT | 58.005 | 45.000 | 0.00 | 0.00 | 34.71 | 1.82 |
882 | 5049 | 2.433436 | GTAGGTCGGTGCCTTTGATTT | 58.567 | 47.619 | 0.00 | 0.00 | 39.94 | 2.17 |
883 | 5050 | 1.339727 | GGTAGGTCGGTGCCTTTGATT | 60.340 | 52.381 | 0.00 | 0.00 | 39.94 | 2.57 |
884 | 5051 | 0.252197 | GGTAGGTCGGTGCCTTTGAT | 59.748 | 55.000 | 0.00 | 0.00 | 39.94 | 2.57 |
885 | 5052 | 0.834687 | AGGTAGGTCGGTGCCTTTGA | 60.835 | 55.000 | 0.00 | 0.00 | 39.94 | 2.69 |
886 | 5053 | 0.899720 | TAGGTAGGTCGGTGCCTTTG | 59.100 | 55.000 | 0.00 | 0.00 | 39.94 | 2.77 |
887 | 5054 | 1.485066 | CATAGGTAGGTCGGTGCCTTT | 59.515 | 52.381 | 0.00 | 0.00 | 39.94 | 3.11 |
888 | 5055 | 1.120530 | CATAGGTAGGTCGGTGCCTT | 58.879 | 55.000 | 0.00 | 0.00 | 39.94 | 4.35 |
889 | 5056 | 1.400530 | GCATAGGTAGGTCGGTGCCT | 61.401 | 60.000 | 0.00 | 0.00 | 42.43 | 4.75 |
890 | 5057 | 1.069258 | GCATAGGTAGGTCGGTGCC | 59.931 | 63.158 | 0.00 | 0.00 | 0.00 | 5.01 |
891 | 5058 | 1.299926 | CGCATAGGTAGGTCGGTGC | 60.300 | 63.158 | 0.00 | 0.00 | 0.00 | 5.01 |
892 | 5059 | 0.742505 | TTCGCATAGGTAGGTCGGTG | 59.257 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
893 | 5060 | 1.407979 | CTTTCGCATAGGTAGGTCGGT | 59.592 | 52.381 | 0.00 | 0.00 | 0.00 | 4.69 |
894 | 5061 | 1.679680 | TCTTTCGCATAGGTAGGTCGG | 59.320 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
895 | 5062 | 3.431922 | TTCTTTCGCATAGGTAGGTCG | 57.568 | 47.619 | 0.00 | 0.00 | 0.00 | 4.79 |
896 | 5063 | 5.873164 | TCTTTTTCTTTCGCATAGGTAGGTC | 59.127 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
897 | 5064 | 5.801380 | TCTTTTTCTTTCGCATAGGTAGGT | 58.199 | 37.500 | 0.00 | 0.00 | 0.00 | 3.08 |
898 | 5065 | 6.737254 | TTCTTTTTCTTTCGCATAGGTAGG | 57.263 | 37.500 | 0.00 | 0.00 | 0.00 | 3.18 |
899 | 5066 | 9.626045 | ATTTTTCTTTTTCTTTCGCATAGGTAG | 57.374 | 29.630 | 0.00 | 0.00 | 0.00 | 3.18 |
900 | 5067 | 9.620660 | GATTTTTCTTTTTCTTTCGCATAGGTA | 57.379 | 29.630 | 0.00 | 0.00 | 0.00 | 3.08 |
901 | 5068 | 8.141268 | TGATTTTTCTTTTTCTTTCGCATAGGT | 58.859 | 29.630 | 0.00 | 0.00 | 0.00 | 3.08 |
1050 | 5266 | 2.125512 | CTGGCTCGTCCCTTTCGG | 60.126 | 66.667 | 0.00 | 0.00 | 0.00 | 4.30 |
1407 | 5629 | 1.139947 | CTCGCCGAGGAAGAGGAAC | 59.860 | 63.158 | 6.13 | 0.00 | 0.00 | 3.62 |
1441 | 5670 | 2.102925 | CCTTGCAACAAAGTGGGTCAAT | 59.897 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
1519 | 5756 | 3.500299 | TCAAATTTGACCTGCGAATTCGA | 59.500 | 39.130 | 31.01 | 14.76 | 39.21 | 3.71 |
1692 | 5930 | 3.168193 | CGATGTTTTCGGTAAATGGTGC | 58.832 | 45.455 | 0.00 | 0.00 | 44.28 | 5.01 |
1736 | 5974 | 4.941263 | GGTCAAATGAGCATACAGTGGTAA | 59.059 | 41.667 | 7.68 | 0.00 | 41.81 | 2.85 |
1739 | 5977 | 3.346315 | TGGTCAAATGAGCATACAGTGG | 58.654 | 45.455 | 11.00 | 0.00 | 46.24 | 4.00 |
1824 | 6063 | 0.867086 | TAACGGCAAACTAACGGTGC | 59.133 | 50.000 | 0.00 | 0.00 | 37.55 | 5.01 |
1885 | 6124 | 3.620300 | CTACGGCCGACTGCGTGAA | 62.620 | 63.158 | 35.90 | 4.03 | 42.61 | 3.18 |
1937 | 6176 | 8.476064 | TGCTACTCTCTCTGATCTGAATTAAT | 57.524 | 34.615 | 3.72 | 0.00 | 0.00 | 1.40 |
1945 | 6184 | 8.710749 | AAGATTAATGCTACTCTCTCTGATCT | 57.289 | 34.615 | 0.00 | 0.00 | 0.00 | 2.75 |
1996 | 7302 | 7.124901 | ACACTTGATGAGATAGAGCCTCTTTAA | 59.875 | 37.037 | 0.00 | 0.00 | 0.00 | 1.52 |
2038 | 7344 | 4.625311 | GCGCATAACCTTTGCAAATACTTT | 59.375 | 37.500 | 13.23 | 6.19 | 40.14 | 2.66 |
2112 | 7418 | 1.862008 | GCGACGATCTCGAGCATTTCT | 60.862 | 52.381 | 7.81 | 0.00 | 46.14 | 2.52 |
2272 | 7578 | 1.808945 | GATCACTGTCAGCCCTTTGTG | 59.191 | 52.381 | 0.00 | 0.00 | 0.00 | 3.33 |
2348 | 7654 | 1.420514 | CCAGCAGGTCATCATCCATCT | 59.579 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
2393 | 7699 | 0.108138 | CAAAGAGTACCGAGGGCCAG | 60.108 | 60.000 | 6.18 | 0.00 | 0.00 | 4.85 |
2445 | 7751 | 3.710326 | TCCTCGTGATTTGGATAGTCG | 57.290 | 47.619 | 0.00 | 0.00 | 0.00 | 4.18 |
2454 | 7760 | 7.162082 | GGTAATCCTCATAATCCTCGTGATTT | 58.838 | 38.462 | 7.94 | 0.00 | 40.92 | 2.17 |
2599 | 7905 | 2.745821 | GGTATTCGGAAACTCCAACCAC | 59.254 | 50.000 | 0.00 | 0.00 | 35.91 | 4.16 |
2615 | 7921 | 6.479972 | TTCCATCAGTGAGAATACGGTATT | 57.520 | 37.500 | 12.98 | 12.98 | 0.00 | 1.89 |
2624 | 7930 | 2.644299 | ACCACCATTCCATCAGTGAGAA | 59.356 | 45.455 | 0.00 | 0.00 | 31.79 | 2.87 |
2629 | 7935 | 1.351017 | ACGAACCACCATTCCATCAGT | 59.649 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
2681 | 7987 | 3.008485 | ACTTCAGTGAGGAAAGGTGGATC | 59.992 | 47.826 | 9.56 | 0.00 | 0.00 | 3.36 |
2693 | 7999 | 5.954296 | AATGGACATCAAACTTCAGTGAG | 57.046 | 39.130 | 0.00 | 0.00 | 0.00 | 3.51 |
2744 | 8050 | 3.420893 | TCCAATAAAACTGGTGCAGAGG | 58.579 | 45.455 | 0.00 | 0.00 | 35.18 | 3.69 |
2746 | 8052 | 8.849168 | CATATATTCCAATAAAACTGGTGCAGA | 58.151 | 33.333 | 0.00 | 0.00 | 35.18 | 4.26 |
2747 | 8053 | 8.849168 | TCATATATTCCAATAAAACTGGTGCAG | 58.151 | 33.333 | 0.00 | 0.00 | 37.52 | 4.41 |
2748 | 8054 | 8.759481 | TCATATATTCCAATAAAACTGGTGCA | 57.241 | 30.769 | 0.00 | 0.00 | 35.30 | 4.57 |
2796 | 8132 | 4.786507 | CAAAATGAAGAAGCACATCGTCA | 58.213 | 39.130 | 5.56 | 5.56 | 41.04 | 4.35 |
2836 | 8173 | 1.078214 | CAAGCTGGCATCCTTCGGA | 60.078 | 57.895 | 0.00 | 0.00 | 35.55 | 4.55 |
2837 | 8174 | 0.677731 | TTCAAGCTGGCATCCTTCGG | 60.678 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2838 | 8175 | 1.167851 | TTTCAAGCTGGCATCCTTCG | 58.832 | 50.000 | 0.00 | 0.00 | 0.00 | 3.79 |
2852 | 8190 | 3.495434 | ACCTCCGTGTACCATTTTCAA | 57.505 | 42.857 | 0.00 | 0.00 | 0.00 | 2.69 |
2860 | 8198 | 0.683412 | ACCTTGAACCTCCGTGTACC | 59.317 | 55.000 | 0.00 | 0.00 | 0.00 | 3.34 |
2914 | 8254 | 4.380867 | GGATGTCTGATTGTCGCCATTTTT | 60.381 | 41.667 | 0.00 | 0.00 | 0.00 | 1.94 |
2915 | 8255 | 3.129287 | GGATGTCTGATTGTCGCCATTTT | 59.871 | 43.478 | 0.00 | 0.00 | 0.00 | 1.82 |
2916 | 8256 | 2.684881 | GGATGTCTGATTGTCGCCATTT | 59.315 | 45.455 | 0.00 | 0.00 | 0.00 | 2.32 |
2917 | 8257 | 2.292267 | GGATGTCTGATTGTCGCCATT | 58.708 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
2932 | 8272 | 2.227089 | GAGCAAGGACGGACGGATGT | 62.227 | 60.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2948 | 8288 | 2.235898 | ACTGATTCAGACCAGGAAGAGC | 59.764 | 50.000 | 20.33 | 0.00 | 35.18 | 4.09 |
2957 | 8297 | 3.406764 | AGAAAGCACACTGATTCAGACC | 58.593 | 45.455 | 20.33 | 5.34 | 35.18 | 3.85 |
3005 | 8349 | 8.149647 | TGACAGCAAACCTTCAATCATAAAAAT | 58.850 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
3021 | 8365 | 1.133790 | GATCAGGCCATGACAGCAAAC | 59.866 | 52.381 | 5.01 | 0.00 | 41.91 | 2.93 |
3026 | 8370 | 0.179026 | CCAGGATCAGGCCATGACAG | 60.179 | 60.000 | 5.01 | 0.00 | 41.91 | 3.51 |
3043 | 8388 | 2.877866 | TCCGCCTTTGTTAAATTCCCA | 58.122 | 42.857 | 0.00 | 0.00 | 0.00 | 4.37 |
3071 | 8419 | 1.857318 | CTGACTGACGGACTGCGTCT | 61.857 | 60.000 | 21.69 | 4.72 | 37.29 | 4.18 |
3134 | 8482 | 9.221933 | TGTGACAAAAGTATACGTGGAAATTAT | 57.778 | 29.630 | 0.00 | 0.00 | 0.00 | 1.28 |
3135 | 8483 | 8.604640 | TGTGACAAAAGTATACGTGGAAATTA | 57.395 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
3136 | 8484 | 7.499321 | TGTGACAAAAGTATACGTGGAAATT | 57.501 | 32.000 | 0.00 | 0.00 | 0.00 | 1.82 |
3144 | 8511 | 6.847792 | GCATCATCATGTGACAAAAGTATACG | 59.152 | 38.462 | 0.00 | 0.00 | 40.28 | 3.06 |
3217 | 8586 | 3.635373 | AGAATGCCGCAATCATCAAGAAT | 59.365 | 39.130 | 11.00 | 0.00 | 0.00 | 2.40 |
3233 | 8604 | 8.907885 | ACAAATATAGGAAGGAAAAGAGAATGC | 58.092 | 33.333 | 0.00 | 0.00 | 0.00 | 3.56 |
3245 | 8616 | 8.463930 | TTCCTAAATGCACAAATATAGGAAGG | 57.536 | 34.615 | 14.63 | 0.00 | 41.94 | 3.46 |
3281 | 8658 | 5.809464 | TCTTGCACGCATCAAATACTATTG | 58.191 | 37.500 | 0.00 | 0.00 | 0.00 | 1.90 |
3293 | 8670 | 1.527034 | ACACAAGATCTTGCACGCAT | 58.473 | 45.000 | 30.95 | 11.30 | 44.03 | 4.73 |
3295 | 8672 | 3.536158 | TTTACACAAGATCTTGCACGC | 57.464 | 42.857 | 30.95 | 0.00 | 44.03 | 5.34 |
3343 | 8720 | 0.903236 | GAGTAGGGTCAAGGTGGGAC | 59.097 | 60.000 | 0.00 | 0.00 | 34.52 | 4.46 |
3359 | 8736 | 4.023707 | CGCAAAATGAAGTTCCTCAAGAGT | 60.024 | 41.667 | 0.00 | 0.00 | 0.00 | 3.24 |
3373 | 8750 | 2.172851 | ACGGGTTAGTCGCAAAATGA | 57.827 | 45.000 | 0.00 | 0.00 | 0.00 | 2.57 |
3382 | 8759 | 3.496155 | CACTCTCGTTAACGGGTTAGTC | 58.504 | 50.000 | 26.12 | 0.00 | 41.39 | 2.59 |
3388 | 8765 | 2.159327 | AAACCACTCTCGTTAACGGG | 57.841 | 50.000 | 26.51 | 24.35 | 42.17 | 5.28 |
3391 | 8768 | 8.026341 | AGCTATTAAAAACCACTCTCGTTAAC | 57.974 | 34.615 | 0.00 | 0.00 | 0.00 | 2.01 |
3393 | 8770 | 6.529125 | CGAGCTATTAAAAACCACTCTCGTTA | 59.471 | 38.462 | 0.00 | 0.00 | 36.96 | 3.18 |
3394 | 8771 | 5.347907 | CGAGCTATTAAAAACCACTCTCGTT | 59.652 | 40.000 | 0.00 | 0.00 | 36.96 | 3.85 |
3395 | 8772 | 4.863131 | CGAGCTATTAAAAACCACTCTCGT | 59.137 | 41.667 | 0.00 | 0.00 | 36.96 | 4.18 |
3396 | 8773 | 5.100259 | TCGAGCTATTAAAAACCACTCTCG | 58.900 | 41.667 | 0.00 | 0.00 | 41.28 | 4.04 |
3397 | 8774 | 5.005875 | GCTCGAGCTATTAAAAACCACTCTC | 59.994 | 44.000 | 29.88 | 0.00 | 38.21 | 3.20 |
3398 | 8775 | 4.870991 | GCTCGAGCTATTAAAAACCACTCT | 59.129 | 41.667 | 29.88 | 0.00 | 38.21 | 3.24 |
3399 | 8776 | 5.145198 | GCTCGAGCTATTAAAAACCACTC | 57.855 | 43.478 | 29.88 | 0.00 | 38.21 | 3.51 |
3414 | 8791 | 1.068250 | GGTACCATGGAGCTCGAGC | 59.932 | 63.158 | 30.01 | 30.01 | 42.49 | 5.03 |
3430 | 10474 | 2.355716 | CGATTGTACTGTTCATGGGGGT | 60.356 | 50.000 | 0.00 | 0.00 | 0.00 | 4.95 |
3433 | 10477 | 5.621197 | TTTTCGATTGTACTGTTCATGGG | 57.379 | 39.130 | 0.00 | 0.00 | 0.00 | 4.00 |
3464 | 10508 | 9.599866 | AAAGTTTCAGAATTTTCGGATCTTTTT | 57.400 | 25.926 | 12.94 | 4.30 | 35.21 | 1.94 |
3465 | 10509 | 9.034544 | CAAAGTTTCAGAATTTTCGGATCTTTT | 57.965 | 29.630 | 14.56 | 6.30 | 35.81 | 2.27 |
3466 | 10510 | 8.197439 | ACAAAGTTTCAGAATTTTCGGATCTTT | 58.803 | 29.630 | 12.94 | 12.94 | 36.94 | 2.52 |
3468 | 10512 | 7.141363 | CACAAAGTTTCAGAATTTTCGGATCT | 58.859 | 34.615 | 0.00 | 0.00 | 31.68 | 2.75 |
3469 | 10513 | 6.363357 | CCACAAAGTTTCAGAATTTTCGGATC | 59.637 | 38.462 | 0.00 | 0.00 | 31.68 | 3.36 |
3470 | 10514 | 6.215845 | CCACAAAGTTTCAGAATTTTCGGAT | 58.784 | 36.000 | 0.00 | 0.00 | 31.68 | 4.18 |
3474 | 10518 | 7.710475 | TCAATCCCACAAAGTTTCAGAATTTTC | 59.290 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
3476 | 10520 | 7.123355 | TCAATCCCACAAAGTTTCAGAATTT | 57.877 | 32.000 | 0.00 | 0.00 | 0.00 | 1.82 |
3478 | 10522 | 6.923199 | ATCAATCCCACAAAGTTTCAGAAT | 57.077 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
3479 | 10523 | 6.729690 | AATCAATCCCACAAAGTTTCAGAA | 57.270 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
3480 | 10524 | 7.669304 | TCATAATCAATCCCACAAAGTTTCAGA | 59.331 | 33.333 | 0.00 | 0.00 | 0.00 | 3.27 |
3481 | 10525 | 7.756722 | GTCATAATCAATCCCACAAAGTTTCAG | 59.243 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
3482 | 10526 | 7.309744 | GGTCATAATCAATCCCACAAAGTTTCA | 60.310 | 37.037 | 0.00 | 0.00 | 0.00 | 2.69 |
3483 | 10527 | 7.035612 | GGTCATAATCAATCCCACAAAGTTTC | 58.964 | 38.462 | 0.00 | 0.00 | 0.00 | 2.78 |
3484 | 10528 | 6.496565 | TGGTCATAATCAATCCCACAAAGTTT | 59.503 | 34.615 | 0.00 | 0.00 | 0.00 | 2.66 |
3485 | 10529 | 6.015918 | TGGTCATAATCAATCCCACAAAGTT | 58.984 | 36.000 | 0.00 | 0.00 | 0.00 | 2.66 |
3487 | 10531 | 6.528537 | TTGGTCATAATCAATCCCACAAAG | 57.471 | 37.500 | 0.00 | 0.00 | 0.00 | 2.77 |
3489 | 10533 | 7.493499 | AATTTGGTCATAATCAATCCCACAA | 57.507 | 32.000 | 0.00 | 0.00 | 0.00 | 3.33 |
3490 | 10534 | 7.493499 | AAATTTGGTCATAATCAATCCCACA | 57.507 | 32.000 | 0.00 | 0.00 | 0.00 | 4.17 |
3491 | 10535 | 7.823799 | ACAAAATTTGGTCATAATCAATCCCAC | 59.176 | 33.333 | 10.71 | 0.00 | 34.12 | 4.61 |
3492 | 10536 | 7.915930 | ACAAAATTTGGTCATAATCAATCCCA | 58.084 | 30.769 | 10.71 | 0.00 | 34.12 | 4.37 |
3493 | 10537 | 9.533253 | CTACAAAATTTGGTCATAATCAATCCC | 57.467 | 33.333 | 10.71 | 0.00 | 34.12 | 3.85 |
3494 | 10538 | 9.533253 | CCTACAAAATTTGGTCATAATCAATCC | 57.467 | 33.333 | 10.71 | 0.00 | 34.12 | 3.01 |
3496 | 10540 | 9.874205 | CACCTACAAAATTTGGTCATAATCAAT | 57.126 | 29.630 | 10.71 | 0.00 | 34.12 | 2.57 |
3497 | 10541 | 7.816995 | GCACCTACAAAATTTGGTCATAATCAA | 59.183 | 33.333 | 10.71 | 0.00 | 34.12 | 2.57 |
3498 | 10542 | 7.178274 | AGCACCTACAAAATTTGGTCATAATCA | 59.822 | 33.333 | 10.71 | 0.00 | 34.12 | 2.57 |
3499 | 10543 | 7.547227 | AGCACCTACAAAATTTGGTCATAATC | 58.453 | 34.615 | 10.71 | 0.00 | 34.12 | 1.75 |
3500 | 10544 | 7.480760 | AGCACCTACAAAATTTGGTCATAAT | 57.519 | 32.000 | 10.71 | 0.00 | 34.12 | 1.28 |
3501 | 10545 | 6.909550 | AGCACCTACAAAATTTGGTCATAA | 57.090 | 33.333 | 10.71 | 0.00 | 34.12 | 1.90 |
3502 | 10546 | 6.686630 | CAAGCACCTACAAAATTTGGTCATA | 58.313 | 36.000 | 10.71 | 0.00 | 34.12 | 2.15 |
3503 | 10547 | 5.540911 | CAAGCACCTACAAAATTTGGTCAT | 58.459 | 37.500 | 10.71 | 0.00 | 34.12 | 3.06 |
3504 | 10548 | 4.739137 | GCAAGCACCTACAAAATTTGGTCA | 60.739 | 41.667 | 10.71 | 0.00 | 34.12 | 4.02 |
3505 | 10549 | 3.740832 | GCAAGCACCTACAAAATTTGGTC | 59.259 | 43.478 | 10.71 | 0.00 | 34.12 | 4.02 |
3506 | 10550 | 3.133721 | TGCAAGCACCTACAAAATTTGGT | 59.866 | 39.130 | 10.71 | 3.18 | 34.12 | 3.67 |
3508 | 10552 | 5.731599 | TTTGCAAGCACCTACAAAATTTG | 57.268 | 34.783 | 3.89 | 3.89 | 0.00 | 2.32 |
3509 | 10553 | 6.940831 | AATTTGCAAGCACCTACAAAATTT | 57.059 | 29.167 | 0.00 | 0.00 | 35.79 | 1.82 |
3510 | 10554 | 6.940831 | AAATTTGCAAGCACCTACAAAATT | 57.059 | 29.167 | 0.00 | 0.00 | 35.79 | 1.82 |
3512 | 10556 | 6.150140 | ACAAAAATTTGCAAGCACCTACAAAA | 59.850 | 30.769 | 0.00 | 0.00 | 41.79 | 2.44 |
3513 | 10557 | 5.645497 | ACAAAAATTTGCAAGCACCTACAAA | 59.355 | 32.000 | 0.00 | 0.00 | 41.79 | 2.83 |
3514 | 10558 | 5.064452 | CACAAAAATTTGCAAGCACCTACAA | 59.936 | 36.000 | 0.00 | 0.00 | 41.79 | 2.41 |
3515 | 10559 | 4.569966 | CACAAAAATTTGCAAGCACCTACA | 59.430 | 37.500 | 0.00 | 0.00 | 41.79 | 2.74 |
3516 | 10560 | 4.570369 | ACACAAAAATTTGCAAGCACCTAC | 59.430 | 37.500 | 0.00 | 0.00 | 41.79 | 3.18 |
3517 | 10561 | 4.764172 | ACACAAAAATTTGCAAGCACCTA | 58.236 | 34.783 | 0.00 | 0.00 | 41.79 | 3.08 |
3518 | 10562 | 3.608796 | ACACAAAAATTTGCAAGCACCT | 58.391 | 36.364 | 0.00 | 0.00 | 41.79 | 4.00 |
3519 | 10563 | 3.242706 | GGACACAAAAATTTGCAAGCACC | 60.243 | 43.478 | 0.00 | 1.89 | 41.79 | 5.01 |
3520 | 10564 | 3.373439 | TGGACACAAAAATTTGCAAGCAC | 59.627 | 39.130 | 0.00 | 0.00 | 41.79 | 4.40 |
3521 | 10565 | 3.603532 | TGGACACAAAAATTTGCAAGCA | 58.396 | 36.364 | 0.00 | 0.00 | 41.79 | 3.91 |
3534 | 10578 | 7.232534 | AGCTCCTAAAATGTTATTTGGACACAA | 59.767 | 33.333 | 0.00 | 0.00 | 34.07 | 3.33 |
3535 | 10579 | 6.719370 | AGCTCCTAAAATGTTATTTGGACACA | 59.281 | 34.615 | 0.00 | 0.00 | 0.00 | 3.72 |
3536 | 10580 | 7.094377 | TGAGCTCCTAAAATGTTATTTGGACAC | 60.094 | 37.037 | 12.15 | 0.00 | 0.00 | 3.67 |
3537 | 10581 | 6.945435 | TGAGCTCCTAAAATGTTATTTGGACA | 59.055 | 34.615 | 12.15 | 0.00 | 0.00 | 4.02 |
3538 | 10582 | 7.391148 | TGAGCTCCTAAAATGTTATTTGGAC | 57.609 | 36.000 | 12.15 | 0.00 | 0.00 | 4.02 |
3539 | 10583 | 9.120538 | GTATGAGCTCCTAAAATGTTATTTGGA | 57.879 | 33.333 | 12.15 | 0.00 | 0.00 | 3.53 |
3541 | 10585 | 9.941664 | CTGTATGAGCTCCTAAAATGTTATTTG | 57.058 | 33.333 | 12.15 | 0.00 | 0.00 | 2.32 |
3542 | 10586 | 9.905713 | TCTGTATGAGCTCCTAAAATGTTATTT | 57.094 | 29.630 | 12.15 | 0.00 | 0.00 | 1.40 |
3544 | 10588 | 9.905713 | TTTCTGTATGAGCTCCTAAAATGTTAT | 57.094 | 29.630 | 12.15 | 0.00 | 0.00 | 1.89 |
3545 | 10589 | 9.733556 | TTTTCTGTATGAGCTCCTAAAATGTTA | 57.266 | 29.630 | 12.15 | 0.00 | 0.00 | 2.41 |
3547 | 10591 | 8.814038 | ATTTTCTGTATGAGCTCCTAAAATGT | 57.186 | 30.769 | 12.15 | 0.00 | 0.00 | 2.71 |
3550 | 10594 | 9.733556 | TGTTATTTTCTGTATGAGCTCCTAAAA | 57.266 | 29.630 | 12.15 | 5.64 | 0.00 | 1.52 |
3551 | 10595 | 9.733556 | TTGTTATTTTCTGTATGAGCTCCTAAA | 57.266 | 29.630 | 12.15 | 0.00 | 0.00 | 1.85 |
3552 | 10596 | 9.905713 | ATTGTTATTTTCTGTATGAGCTCCTAA | 57.094 | 29.630 | 12.15 | 0.00 | 0.00 | 2.69 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.