Multiple sequence alignment - TraesCS7D01G203400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G203400 chr7D 100.000 8399 0 0 1 8399 161481839 161490237 0.000000e+00 15511.0
1 TraesCS7D01G203400 chr7D 74.960 623 113 24 4342 4943 186292220 186291620 6.510000e-61 246.0
2 TraesCS7D01G203400 chr7A 95.877 1334 43 5 1666 2992 162776298 162777626 0.000000e+00 2148.0
3 TraesCS7D01G203400 chr7A 94.665 1312 55 10 3114 4420 162777631 162778932 0.000000e+00 2021.0
4 TraesCS7D01G203400 chr7A 93.209 1075 60 5 4454 5515 162778929 162780003 0.000000e+00 1568.0
5 TraesCS7D01G203400 chr7A 92.453 954 65 7 7019 7968 162781354 162782304 0.000000e+00 1356.0
6 TraesCS7D01G203400 chr7A 95.736 774 20 7 5901 6663 162780397 162781168 0.000000e+00 1234.0
7 TraesCS7D01G203400 chr7A 94.022 803 26 3 1 797 162773664 162774450 0.000000e+00 1197.0
8 TraesCS7D01G203400 chr7A 97.051 373 10 1 938 1310 162775337 162775708 1.990000e-175 627.0
9 TraesCS7D01G203400 chr7A 93.860 342 18 1 5546 5884 162780005 162780346 5.810000e-141 512.0
10 TraesCS7D01G203400 chr7A 88.089 361 39 3 8040 8399 162782406 162782763 7.790000e-115 425.0
11 TraesCS7D01G203400 chr7A 89.017 346 22 7 1337 1675 162775779 162776115 1.690000e-111 414.0
12 TraesCS7D01G203400 chr7A 98.462 195 3 0 6703 6897 162781163 162781357 2.240000e-90 344.0
13 TraesCS7D01G203400 chr7A 93.162 117 7 1 2999 3115 247996500 247996385 4.030000e-38 171.0
14 TraesCS7D01G203400 chr7A 90.909 66 1 1 855 920 162775225 162775285 5.400000e-12 84.2
15 TraesCS7D01G203400 chr7B 96.462 1300 41 3 3114 4409 123786911 123788209 0.000000e+00 2141.0
16 TraesCS7D01G203400 chr7B 91.491 1469 95 14 4423 5884 123794339 123795784 0.000000e+00 1993.0
17 TraesCS7D01G203400 chr7B 94.487 1052 22 12 5904 6920 123795841 123796891 0.000000e+00 1589.0
18 TraesCS7D01G203400 chr7B 94.592 943 35 6 1337 2276 123785059 123785988 0.000000e+00 1445.0
19 TraesCS7D01G203400 chr7B 97.154 738 18 1 2258 2992 123786169 123786906 0.000000e+00 1243.0
20 TraesCS7D01G203400 chr7B 94.459 776 34 4 1 775 123783710 123784477 0.000000e+00 1186.0
21 TraesCS7D01G203400 chr7B 92.190 717 52 4 6992 7707 123796921 123797634 0.000000e+00 1011.0
22 TraesCS7D01G203400 chr7B 89.555 517 33 16 809 1310 123784478 123784988 3.310000e-178 636.0
23 TraesCS7D01G203400 chr7B 89.057 265 22 4 7778 8036 123797666 123797929 1.050000e-83 322.0
24 TraesCS7D01G203400 chr7B 82.917 240 30 9 8162 8399 711450151 711450381 1.110000e-48 206.0
25 TraesCS7D01G203400 chr7B 82.645 242 31 8 8159 8399 717535202 717535433 3.970000e-48 204.0
26 TraesCS7D01G203400 chrUn 76.283 721 113 28 4256 4943 136131525 136130830 1.750000e-86 331.0
27 TraesCS7D01G203400 chrUn 77.595 607 95 21 4353 4943 128832026 128831445 6.280000e-86 329.0
28 TraesCS7D01G203400 chrUn 76.144 721 114 31 4256 4943 229911201 229911896 8.130000e-85 326.0
29 TraesCS7D01G203400 chrUn 75.900 722 115 29 4256 4943 143317256 143317952 1.760000e-81 315.0
30 TraesCS7D01G203400 chrUn 77.807 383 53 13 4571 4943 256049143 256049503 3.070000e-49 207.0
31 TraesCS7D01G203400 chrUn 89.051 137 5 6 2998 3124 477687578 477687442 2.430000e-35 161.0
32 TraesCS7D01G203400 chrUn 90.551 127 2 6 2999 3115 103517773 103517647 8.730000e-35 159.0
33 TraesCS7D01G203400 chrUn 89.764 127 3 6 2999 3115 52994438 52994564 4.060000e-33 154.0
34 TraesCS7D01G203400 chrUn 87.879 132 6 6 2996 3117 379120157 379120288 6.790000e-31 147.0
35 TraesCS7D01G203400 chrUn 87.805 123 14 1 2993 3115 9343594 9343715 8.790000e-30 143.0
36 TraesCS7D01G203400 chrUn 86.992 123 16 0 2993 3115 80550599 80550721 1.140000e-28 139.0
37 TraesCS7D01G203400 chrUn 86.992 123 15 1 2993 3115 9472351 9472230 4.090000e-28 137.0
38 TraesCS7D01G203400 chrUn 87.179 117 15 0 2999 3115 287061719 287061603 5.290000e-27 134.0
39 TraesCS7D01G203400 chrUn 86.555 119 15 1 2997 3115 86629265 86629382 6.840000e-26 130.0
40 TraesCS7D01G203400 chrUn 86.325 117 16 0 2999 3115 86908434 86908318 2.460000e-25 128.0
41 TraesCS7D01G203400 chrUn 83.065 124 20 1 2996 3119 97740064 97740186 2.480000e-20 111.0
42 TraesCS7D01G203400 chrUn 85.321 109 15 1 3829 3937 388582615 388582508 2.480000e-20 111.0
43 TraesCS7D01G203400 chrUn 85.321 109 15 1 3829 3937 436910318 436910425 2.480000e-20 111.0
44 TraesCS7D01G203400 chrUn 85.321 109 15 1 3829 3937 447470645 447470752 2.480000e-20 111.0
45 TraesCS7D01G203400 chrUn 78.061 196 26 13 5654 5846 14151041 14150860 3.210000e-19 108.0
46 TraesCS7D01G203400 chrUn 78.061 196 26 13 5654 5846 430161554 430161735 3.210000e-19 108.0
47 TraesCS7D01G203400 chrUn 85.294 102 15 0 3014 3115 134234270 134234169 1.150000e-18 106.0
48 TraesCS7D01G203400 chrUn 84.404 109 16 1 3829 3937 418848581 418848474 1.150000e-18 106.0
49 TraesCS7D01G203400 chrUn 82.203 118 19 2 2999 3115 9343715 9343599 5.360000e-17 100.0
50 TraesCS7D01G203400 chr5B 77.595 607 95 21 4353 4943 202390636 202390055 6.280000e-86 329.0
51 TraesCS7D01G203400 chr5B 92.437 119 6 3 2998 3115 38357012 38357128 5.210000e-37 167.0
52 TraesCS7D01G203400 chr5B 91.667 120 7 1 2999 3115 480765034 480764915 6.750000e-36 163.0
53 TraesCS7D01G203400 chr5B 90.164 122 11 1 2995 3116 38357132 38357012 3.140000e-34 158.0
54 TraesCS7D01G203400 chr5B 90.083 121 11 1 2998 3118 6497342 6497223 1.130000e-33 156.0
55 TraesCS7D01G203400 chr5B 84.211 95 14 1 6120 6214 169823456 169823549 3.230000e-14 91.6
56 TraesCS7D01G203400 chr5B 83.000 100 16 1 6119 6218 200531740 200531838 1.160000e-13 89.8
57 TraesCS7D01G203400 chr1B 77.398 615 99 20 4345 4943 245335096 245334506 6.280000e-86 329.0
58 TraesCS7D01G203400 chr1B 78.317 309 59 8 4342 4646 400810408 400810712 8.600000e-45 193.0
59 TraesCS7D01G203400 chr1B 89.344 122 12 1 2995 3115 137651557 137651678 1.460000e-32 152.0
60 TraesCS7D01G203400 chr1B 80.328 183 20 12 5665 5846 245185005 245185172 3.180000e-24 124.0
61 TraesCS7D01G203400 chr1B 84.000 100 15 1 6119 6218 431052097 431052195 2.500000e-15 95.3
62 TraesCS7D01G203400 chr1B 82.178 101 14 3 6119 6218 255219143 255219240 5.400000e-12 84.2
63 TraesCS7D01G203400 chr3B 75.867 721 116 31 4256 4943 347131719 347131024 1.760000e-81 315.0
64 TraesCS7D01G203400 chr3B 86.239 109 14 1 3829 3937 167062762 167062655 5.330000e-22 117.0
65 TraesCS7D01G203400 chr3B 83.019 106 17 1 6119 6224 328815929 328815825 2.500000e-15 95.3
66 TraesCS7D01G203400 chr4D 76.936 607 100 25 4353 4943 257399277 257398695 8.190000e-80 309.0
67 TraesCS7D01G203400 chr4D 95.745 141 6 0 6890 7030 492804279 492804419 2.360000e-55 228.0
68 TraesCS7D01G203400 chr1D 74.480 721 121 35 4255 4941 298091477 298092168 3.890000e-63 254.0
69 TraesCS7D01G203400 chr1D 90.756 119 7 4 2999 3115 407172397 407172513 1.130000e-33 156.0
70 TraesCS7D01G203400 chr1D 89.916 119 8 4 2999 3115 407172513 407172397 5.250000e-32 150.0
71 TraesCS7D01G203400 chr1D 88.889 117 11 2 2999 3115 491052649 491052535 8.790000e-30 143.0
72 TraesCS7D01G203400 chr1D 78.680 197 24 11 5654 5846 216699106 216699288 1.920000e-21 115.0
73 TraesCS7D01G203400 chr5A 74.380 726 119 44 4256 4943 218655612 218656308 1.810000e-61 248.0
74 TraesCS7D01G203400 chr5A 88.806 134 7 5 2990 3117 496751862 496751993 3.140000e-34 158.0
75 TraesCS7D01G203400 chr3A 100.000 131 0 0 6892 7022 686615438 686615308 8.420000e-60 243.0
76 TraesCS7D01G203400 chr3A 97.794 136 2 1 6890 7025 348834576 348834442 5.070000e-57 233.0
77 TraesCS7D01G203400 chr3A 98.485 132 1 1 6894 7025 59516007 59515877 1.820000e-56 231.0
78 TraesCS7D01G203400 chr3A 93.277 119 8 0 2997 3115 161829738 161829856 8.660000e-40 176.0
79 TraesCS7D01G203400 chr6B 98.519 135 1 1 6893 7027 582867068 582866935 3.920000e-58 237.0
80 TraesCS7D01G203400 chr6B 93.162 117 8 0 2999 3115 27165887 27165771 1.120000e-38 172.0
81 TraesCS7D01G203400 chr6B 86.861 137 17 1 2999 3135 181705162 181705027 1.460000e-32 152.0
82 TraesCS7D01G203400 chr6B 87.786 131 14 2 2990 3119 595158275 595158404 1.460000e-32 152.0
83 TraesCS7D01G203400 chr6B 78.571 196 25 13 5654 5846 324692751 324692570 6.890000e-21 113.0
84 TraesCS7D01G203400 chr4A 97.143 140 4 0 6884 7023 729151978 729151839 3.920000e-58 237.0
85 TraesCS7D01G203400 chr4A 77.240 413 67 19 4258 4646 306613225 306612816 5.110000e-52 217.0
86 TraesCS7D01G203400 chr4A 78.061 196 26 13 5654 5846 264628937 264628756 3.210000e-19 108.0
87 TraesCS7D01G203400 chr4A 78.061 196 26 13 5654 5846 264634559 264634378 3.210000e-19 108.0
88 TraesCS7D01G203400 chr4B 98.496 133 2 0 6888 7020 70813977 70814109 1.410000e-57 235.0
89 TraesCS7D01G203400 chr4B 73.343 724 130 35 4256 4943 296274107 296273411 8.540000e-50 209.0
90 TraesCS7D01G203400 chr4B 89.062 128 13 1 2997 3124 660685810 660685936 3.140000e-34 158.0
91 TraesCS7D01G203400 chr4B 90.598 117 11 0 2999 3115 33623049 33622933 1.130000e-33 156.0
92 TraesCS7D01G203400 chr4B 88.000 125 15 0 2994 3118 15419015 15418891 1.890000e-31 148.0
93 TraesCS7D01G203400 chr4B 86.667 135 16 2 2985 3118 488345388 488345255 1.890000e-31 148.0
94 TraesCS7D01G203400 chr4B 78.571 182 25 11 5665 5846 337939602 337939435 3.210000e-19 108.0
95 TraesCS7D01G203400 chr3D 82.759 261 34 7 8143 8399 406408052 406408305 1.100000e-53 222.0
96 TraesCS7D01G203400 chr3D 82.800 250 36 7 8151 8399 58475568 58475811 5.110000e-52 217.0
97 TraesCS7D01G203400 chr3D 82.553 235 37 4 8166 8399 607897815 607898046 3.970000e-48 204.0
98 TraesCS7D01G203400 chr3D 74.085 355 70 15 4256 4589 332314397 332314750 8.850000e-25 126.0
99 TraesCS7D01G203400 chr1A 93.960 149 6 3 6876 7024 287274995 287275140 1.100000e-53 222.0
100 TraesCS7D01G203400 chr1A 90.083 121 11 1 2999 3119 357787034 357787153 1.130000e-33 156.0
101 TraesCS7D01G203400 chr1A 88.430 121 10 3 2999 3115 365069487 365069607 8.790000e-30 143.0
102 TraesCS7D01G203400 chr1A 88.333 120 13 1 2999 3117 539977692 539977573 8.790000e-30 143.0
103 TraesCS7D01G203400 chr1A 87.705 122 14 1 2999 3120 569891932 569891812 3.160000e-29 141.0
104 TraesCS7D01G203400 chr1A 74.375 320 58 19 4255 4555 371273345 371273659 1.920000e-21 115.0
105 TraesCS7D01G203400 chr1A 85.321 109 15 1 3829 3937 82673071 82673178 2.480000e-20 111.0
106 TraesCS7D01G203400 chr1A 85.321 109 15 1 3829 3937 213265009 213264902 2.480000e-20 111.0
107 TraesCS7D01G203400 chr1A 85.321 109 15 1 3829 3937 577582557 577582450 2.480000e-20 111.0
108 TraesCS7D01G203400 chr1A 85.321 109 15 1 3829 3937 593996738 593996845 2.480000e-20 111.0
109 TraesCS7D01G203400 chr1A 87.671 73 8 1 5665 5737 277489212 277489283 5.400000e-12 84.2
110 TraesCS7D01G203400 chr6A 93.377 151 6 3 6893 7042 594435657 594435510 3.950000e-53 220.0
111 TraesCS7D01G203400 chr6A 75.962 416 75 14 4256 4649 224588105 224587693 3.090000e-44 191.0
112 TraesCS7D01G203400 chr6A 92.308 117 6 2 2999 3115 609100598 609100485 6.750000e-36 163.0
113 TraesCS7D01G203400 chr6A 91.453 117 6 2 2999 3115 12879183 12879295 3.140000e-34 158.0
114 TraesCS7D01G203400 chr6A 77.083 144 21 10 5689 5830 204719850 204719983 1.170000e-08 73.1
115 TraesCS7D01G203400 chr6A 73.743 179 35 10 2998 3169 21612753 21612580 9.100000e-05 60.2
116 TraesCS7D01G203400 chr2A 83.539 243 33 6 8159 8399 602696428 602696191 3.950000e-53 220.0
117 TraesCS7D01G203400 chr2D 82.083 240 40 3 8160 8399 78399734 78399498 1.430000e-47 202.0
118 TraesCS7D01G203400 chr2D 90.323 124 9 3 2997 3118 403055071 403054949 8.730000e-35 159.0
119 TraesCS7D01G203400 chr2D 85.517 145 18 3 2982 3125 648554073 648554215 1.890000e-31 148.0
120 TraesCS7D01G203400 chr6D 81.667 240 34 8 8161 8399 434464283 434464513 3.090000e-44 191.0
121 TraesCS7D01G203400 chr6D 88.976 127 8 3 2995 3115 155248012 155247886 1.460000e-32 152.0
122 TraesCS7D01G203400 chr6D 88.430 121 13 1 2995 3115 293082485 293082604 2.440000e-30 145.0
123 TraesCS7D01G203400 chr6D 88.034 117 14 0 2999 3115 394829860 394829744 1.140000e-28 139.0
124 TraesCS7D01G203400 chr6D 88.034 117 14 0 2999 3115 420763926 420763810 1.140000e-28 139.0
125 TraesCS7D01G203400 chr6D 87.603 121 11 2 2999 3115 54076743 54076623 4.090000e-28 137.0
126 TraesCS7D01G203400 chr6D 85.600 125 18 0 2991 3115 458055249 458055125 1.900000e-26 132.0
127 TraesCS7D01G203400 chr6D 82.000 100 17 1 6119 6218 219949731 219949829 5.400000e-12 84.2
128 TraesCS7D01G203400 chr5D 81.132 106 18 2 6119 6224 381168246 381168143 5.400000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G203400 chr7D 161481839 161490237 8398 False 15511.000000 15511 100.00000 1 8399 1 chr7D.!!$F1 8398
1 TraesCS7D01G203400 chr7D 186291620 186292220 600 True 246.000000 246 74.96000 4342 4943 1 chr7D.!!$R1 601
2 TraesCS7D01G203400 chr7A 162773664 162782763 9099 False 994.183333 2148 93.61250 1 8399 12 chr7A.!!$F1 8398
3 TraesCS7D01G203400 chr7B 123783710 123788209 4499 False 1330.200000 2141 94.44440 1 4409 5 chr7B.!!$F3 4408
4 TraesCS7D01G203400 chr7B 123794339 123797929 3590 False 1228.750000 1993 91.80625 4423 8036 4 chr7B.!!$F4 3613
5 TraesCS7D01G203400 chrUn 136130830 136131525 695 True 331.000000 331 76.28300 4256 4943 1 chrUn.!!$R8 687
6 TraesCS7D01G203400 chrUn 128831445 128832026 581 True 329.000000 329 77.59500 4353 4943 1 chrUn.!!$R6 590
7 TraesCS7D01G203400 chrUn 229911201 229911896 695 False 326.000000 326 76.14400 4256 4943 1 chrUn.!!$F7 687
8 TraesCS7D01G203400 chrUn 143317256 143317952 696 False 315.000000 315 75.90000 4256 4943 1 chrUn.!!$F6 687
9 TraesCS7D01G203400 chr5B 202390055 202390636 581 True 329.000000 329 77.59500 4353 4943 1 chr5B.!!$R3 590
10 TraesCS7D01G203400 chr1B 245334506 245335096 590 True 329.000000 329 77.39800 4345 4943 1 chr1B.!!$R1 598
11 TraesCS7D01G203400 chr3B 347131024 347131719 695 True 315.000000 315 75.86700 4256 4943 1 chr3B.!!$R3 687
12 TraesCS7D01G203400 chr4D 257398695 257399277 582 True 309.000000 309 76.93600 4353 4943 1 chr4D.!!$R1 590
13 TraesCS7D01G203400 chr1D 298091477 298092168 691 False 254.000000 254 74.48000 4255 4941 1 chr1D.!!$F2 686
14 TraesCS7D01G203400 chr5A 218655612 218656308 696 False 248.000000 248 74.38000 4256 4943 1 chr5A.!!$F1 687
15 TraesCS7D01G203400 chr4B 296273411 296274107 696 True 209.000000 209 73.34300 4256 4943 1 chr4B.!!$R3 687

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
46 47 0.955428 ATGCCAGCACGTTGAACGAT 60.955 50.000 25.62 6.87 46.05 3.73 F
949 1702 1.218316 CCGCGCCTTTCCTCTACTT 59.782 57.895 0.00 0.00 0.00 2.24 F
1010 1786 1.330655 GCCGGAGACATGGAGGAGAA 61.331 60.000 5.05 0.00 0.00 2.87 F
2432 3665 1.079750 GGCAACCAGAGAGGACGTC 60.080 63.158 7.13 7.13 41.22 4.34 F
3111 4349 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20 F
3112 4350 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30 F
4951 6266 0.250124 TTGGATCGTCAGTGCCGTTT 60.250 50.000 0.00 0.00 0.00 3.60 F
5023 6338 0.246910 GTTCTCCGTCCTCCTGTTCC 59.753 60.000 0.00 0.00 0.00 3.62 F
5473 6790 0.541063 TGAAGGACCGTGCTGGAGTA 60.541 55.000 2.38 0.00 42.00 2.59 F
5625 6944 0.663153 GGCCGACCAATTGATAGTGC 59.337 55.000 7.12 2.88 35.26 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1247 2024 1.176527 CGCCATTGGATTCCAACAGT 58.823 50.000 20.21 2.13 46.95 3.55 R
2432 3665 1.408702 CAATATGCTTTTGGGGTCCCG 59.591 52.381 0.48 0.00 39.42 5.14 R
2992 4230 1.144503 TGGACGGAGGGAGTAGATACC 59.855 57.143 0.00 0.00 0.00 2.73 R
4136 5385 0.674895 GTGCTGCCCCTACTCAAGTG 60.675 60.000 0.00 0.00 0.00 3.16 R
4707 6010 0.966179 GGGGTTTGATTGCGGTCTTT 59.034 50.000 0.00 0.00 0.00 2.52 R
5017 6332 1.254026 TCTACACCTCGTGGGAACAG 58.746 55.000 8.63 0.00 44.46 3.16 R
6894 8294 1.004394 GAATTTTGGGACGGAGGGAGT 59.996 52.381 0.00 0.00 0.00 3.85 R
7002 8402 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28 R
7130 8613 0.107410 AAGTTTGACACACCAGCGGA 60.107 50.000 1.50 0.00 0.00 5.54 R
7569 9053 0.317479 ACAGTACCAGCAAGTCCGAC 59.683 55.000 0.00 0.00 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 0.955428 ATGCCAGCACGTTGAACGAT 60.955 50.000 25.62 6.87 46.05 3.73
138 139 5.551305 TGAGAATTGACAACAGAAGAGGA 57.449 39.130 0.00 0.00 0.00 3.71
176 177 2.048127 GACTGACCGCGCTTCCTT 60.048 61.111 5.56 0.00 0.00 3.36
264 265 3.486043 CCACTTGTCTGATCTCGTACTCG 60.486 52.174 0.00 0.00 38.55 4.18
288 289 4.131376 CGCTTCAGGATGCGGAAT 57.869 55.556 18.38 0.00 46.78 3.01
351 357 1.413118 AAGCAAGTCCCAAAACCCTG 58.587 50.000 0.00 0.00 0.00 4.45
385 392 3.682292 AATGGAGCGTTCCTCGGGC 62.682 63.158 19.73 0.00 44.36 6.13
727 734 1.811266 CTGCGCTGGCGAGTTATGT 60.811 57.895 19.31 0.00 44.10 2.29
805 812 4.363990 CCTCGCCACAGCACGTCT 62.364 66.667 0.00 0.00 39.83 4.18
806 813 2.807045 CTCGCCACAGCACGTCTC 60.807 66.667 0.00 0.00 39.83 3.36
807 814 3.274455 CTCGCCACAGCACGTCTCT 62.274 63.158 0.00 0.00 39.83 3.10
946 1699 4.157120 GGCCGCGCCTTTCCTCTA 62.157 66.667 0.00 0.00 46.69 2.43
947 1700 2.890961 GCCGCGCCTTTCCTCTAC 60.891 66.667 0.00 0.00 0.00 2.59
948 1701 2.893398 CCGCGCCTTTCCTCTACT 59.107 61.111 0.00 0.00 0.00 2.57
949 1702 1.218316 CCGCGCCTTTCCTCTACTT 59.782 57.895 0.00 0.00 0.00 2.24
1010 1786 1.330655 GCCGGAGACATGGAGGAGAA 61.331 60.000 5.05 0.00 0.00 2.87
1032 1808 3.388703 GAGGCAGCTGCTCCTCCTG 62.389 68.421 35.82 8.05 42.30 3.86
1131 1907 3.839432 GAACCCTCCTCCTCGCGG 61.839 72.222 6.13 0.00 0.00 6.46
1220 1997 3.888460 TTGCTGAGTGGCAGGGCA 61.888 61.111 0.00 0.00 45.03 5.36
1251 2028 2.604174 GGCTACGTGCGCAAACTGT 61.604 57.895 14.00 11.49 44.05 3.55
1306 2083 4.585879 GCTGGTAAACCTCTGGTTAATGA 58.414 43.478 2.15 0.00 46.20 2.57
1310 2087 7.461182 TGGTAAACCTCTGGTTAATGATTTG 57.539 36.000 2.15 0.00 46.20 2.32
1311 2088 6.071616 TGGTAAACCTCTGGTTAATGATTTGC 60.072 38.462 2.15 0.00 46.20 3.68
1312 2089 5.405935 AAACCTCTGGTTAATGATTTGCC 57.594 39.130 2.15 0.00 46.20 4.52
1313 2090 4.046286 ACCTCTGGTTAATGATTTGCCA 57.954 40.909 1.55 1.55 27.29 4.92
1314 2091 3.763897 ACCTCTGGTTAATGATTTGCCAC 59.236 43.478 0.00 0.00 27.29 5.01
1315 2092 3.131046 CCTCTGGTTAATGATTTGCCACC 59.869 47.826 0.00 0.00 0.00 4.61
1316 2093 4.019174 CTCTGGTTAATGATTTGCCACCT 58.981 43.478 0.00 0.00 0.00 4.00
1320 2097 3.513515 GGTTAATGATTTGCCACCTTCCA 59.486 43.478 0.00 0.00 0.00 3.53
1324 2101 2.238521 TGATTTGCCACCTTCCAGTTC 58.761 47.619 0.00 0.00 0.00 3.01
1333 2110 3.188460 CCACCTTCCAGTTCAATAACGTG 59.812 47.826 0.00 0.00 40.73 4.49
1341 2169 4.387862 CCAGTTCAATAACGTGTACTCCAC 59.612 45.833 0.00 0.00 40.73 4.02
1455 2289 3.023119 TGCTGAAATGCCGGTATTGAAT 58.977 40.909 19.08 2.81 0.00 2.57
1470 2304 7.114811 CCGGTATTGAATTTTGAACTTGTTCTG 59.885 37.037 13.65 0.00 0.00 3.02
1471 2305 7.358352 CGGTATTGAATTTTGAACTTGTTCTGC 60.358 37.037 13.65 0.00 0.00 4.26
1472 2306 7.653311 GGTATTGAATTTTGAACTTGTTCTGCT 59.347 33.333 13.65 0.00 0.00 4.24
1473 2307 9.034544 GTATTGAATTTTGAACTTGTTCTGCTT 57.965 29.630 13.65 3.85 0.00 3.91
1474 2308 7.524294 TTGAATTTTGAACTTGTTCTGCTTC 57.476 32.000 13.65 11.14 0.00 3.86
1475 2309 6.866480 TGAATTTTGAACTTGTTCTGCTTCT 58.134 32.000 13.65 0.00 0.00 2.85
1476 2310 6.753279 TGAATTTTGAACTTGTTCTGCTTCTG 59.247 34.615 13.65 0.00 0.00 3.02
1477 2311 5.643379 TTTTGAACTTGTTCTGCTTCTGT 57.357 34.783 13.65 0.00 0.00 3.41
1479 2313 3.872696 TGAACTTGTTCTGCTTCTGTCA 58.127 40.909 13.65 0.00 0.00 3.58
1519 2354 2.202395 TTTGTTGGGAGCAGGCAGC 61.202 57.895 0.00 0.00 46.19 5.25
1558 2393 2.491298 TCTGCATGATAGCTCGGATCTC 59.509 50.000 0.00 0.00 34.99 2.75
1627 2462 7.275183 TCTTACTTGATATATTGCACAGCTGT 58.725 34.615 15.25 15.25 0.00 4.40
1774 2801 7.493971 GCAGAAAGTGATATGTATTCTCACAGT 59.506 37.037 4.90 0.00 41.34 3.55
2000 3029 8.073355 AGTTACTGAATCTTTTGTTGTAGTCG 57.927 34.615 0.00 0.00 0.00 4.18
2121 3155 2.702592 TGTCAACCTGGAGTCGTTTT 57.297 45.000 0.00 0.00 0.00 2.43
2122 3156 3.823281 TGTCAACCTGGAGTCGTTTTA 57.177 42.857 0.00 0.00 0.00 1.52
2123 3157 3.460103 TGTCAACCTGGAGTCGTTTTAC 58.540 45.455 0.00 0.00 0.00 2.01
2124 3158 3.133362 TGTCAACCTGGAGTCGTTTTACT 59.867 43.478 0.00 0.00 0.00 2.24
2125 3159 4.124970 GTCAACCTGGAGTCGTTTTACTT 58.875 43.478 0.00 0.00 0.00 2.24
2186 3220 5.072055 TCCATTTGAAGCACAGAGAATCAA 58.928 37.500 0.00 0.00 37.82 2.57
2303 3536 5.268387 TGTGGTAGTATGAAATGGGCATTT 58.732 37.500 0.00 0.00 43.14 2.32
2432 3665 1.079750 GGCAACCAGAGAGGACGTC 60.080 63.158 7.13 7.13 41.22 4.34
2714 3948 8.997621 TTCTTCAGTATTCAGGTGTATGTTAC 57.002 34.615 0.00 0.00 0.00 2.50
2720 3954 9.988350 CAGTATTCAGGTGTATGTTACATTTTC 57.012 33.333 2.23 0.00 41.34 2.29
2794 4032 7.830099 GAGGAAATAATTGTGAATCCTCCAT 57.170 36.000 15.44 0.00 44.58 3.41
2845 4083 8.530311 AGGAATGATCTAGTAGCATAATCACAG 58.470 37.037 2.32 0.00 31.46 3.66
2988 4226 3.256631 AGCAAAATGTTACTTGGCTCAGG 59.743 43.478 0.00 0.00 0.00 3.86
2992 4230 4.853924 AATGTTACTTGGCTCAGGTTTG 57.146 40.909 0.00 0.00 0.00 2.93
2993 4231 2.582052 TGTTACTTGGCTCAGGTTTGG 58.418 47.619 0.00 0.00 0.00 3.28
2995 4233 3.136809 TGTTACTTGGCTCAGGTTTGGTA 59.863 43.478 0.00 0.00 0.00 3.25
2996 4234 4.202524 TGTTACTTGGCTCAGGTTTGGTAT 60.203 41.667 0.00 0.00 0.00 2.73
2997 4235 3.073274 ACTTGGCTCAGGTTTGGTATC 57.927 47.619 0.00 0.00 0.00 2.24
2998 4236 2.644798 ACTTGGCTCAGGTTTGGTATCT 59.355 45.455 0.00 0.00 0.00 1.98
2999 4237 3.844211 ACTTGGCTCAGGTTTGGTATCTA 59.156 43.478 0.00 0.00 0.00 1.98
3000 4238 3.906720 TGGCTCAGGTTTGGTATCTAC 57.093 47.619 0.00 0.00 0.00 2.59
3001 4239 3.450904 TGGCTCAGGTTTGGTATCTACT 58.549 45.455 0.00 0.00 0.00 2.57
3002 4240 3.451178 TGGCTCAGGTTTGGTATCTACTC 59.549 47.826 0.00 0.00 0.00 2.59
3003 4241 3.181464 GGCTCAGGTTTGGTATCTACTCC 60.181 52.174 0.00 0.00 0.00 3.85
3004 4242 3.181464 GCTCAGGTTTGGTATCTACTCCC 60.181 52.174 0.00 0.00 0.00 4.30
3005 4243 4.290942 CTCAGGTTTGGTATCTACTCCCT 58.709 47.826 0.00 0.00 0.00 4.20
3006 4244 4.287552 TCAGGTTTGGTATCTACTCCCTC 58.712 47.826 0.00 0.00 0.00 4.30
3007 4245 3.388350 CAGGTTTGGTATCTACTCCCTCC 59.612 52.174 0.00 0.00 0.00 4.30
3008 4246 2.364647 GGTTTGGTATCTACTCCCTCCG 59.635 54.545 0.00 0.00 0.00 4.63
3009 4247 3.029570 GTTTGGTATCTACTCCCTCCGT 58.970 50.000 0.00 0.00 0.00 4.69
3010 4248 2.653234 TGGTATCTACTCCCTCCGTC 57.347 55.000 0.00 0.00 0.00 4.79
3011 4249 1.144503 TGGTATCTACTCCCTCCGTCC 59.855 57.143 0.00 0.00 0.00 4.79
3012 4250 1.144503 GGTATCTACTCCCTCCGTCCA 59.855 57.143 0.00 0.00 0.00 4.02
3013 4251 2.423947 GGTATCTACTCCCTCCGTCCAA 60.424 54.545 0.00 0.00 0.00 3.53
3014 4252 2.544844 ATCTACTCCCTCCGTCCAAA 57.455 50.000 0.00 0.00 0.00 3.28
3015 4253 2.314071 TCTACTCCCTCCGTCCAAAA 57.686 50.000 0.00 0.00 0.00 2.44
3016 4254 2.612000 TCTACTCCCTCCGTCCAAAAA 58.388 47.619 0.00 0.00 0.00 1.94
3017 4255 3.178865 TCTACTCCCTCCGTCCAAAAAT 58.821 45.455 0.00 0.00 0.00 1.82
3018 4256 4.355549 TCTACTCCCTCCGTCCAAAAATA 58.644 43.478 0.00 0.00 0.00 1.40
3019 4257 3.345508 ACTCCCTCCGTCCAAAAATAC 57.654 47.619 0.00 0.00 0.00 1.89
3020 4258 2.910977 ACTCCCTCCGTCCAAAAATACT 59.089 45.455 0.00 0.00 0.00 2.12
3021 4259 3.329814 ACTCCCTCCGTCCAAAAATACTT 59.670 43.478 0.00 0.00 0.00 2.24
3022 4260 3.681593 TCCCTCCGTCCAAAAATACTTG 58.318 45.455 0.00 0.00 0.00 3.16
3023 4261 3.073356 TCCCTCCGTCCAAAAATACTTGT 59.927 43.478 0.00 0.00 0.00 3.16
3024 4262 3.439129 CCCTCCGTCCAAAAATACTTGTC 59.561 47.826 0.00 0.00 0.00 3.18
3025 4263 4.069304 CCTCCGTCCAAAAATACTTGTCA 58.931 43.478 0.00 0.00 0.00 3.58
3026 4264 4.700213 CCTCCGTCCAAAAATACTTGTCAT 59.300 41.667 0.00 0.00 0.00 3.06
3027 4265 5.163754 CCTCCGTCCAAAAATACTTGTCATC 60.164 44.000 0.00 0.00 0.00 2.92
3028 4266 5.309638 TCCGTCCAAAAATACTTGTCATCA 58.690 37.500 0.00 0.00 0.00 3.07
3029 4267 5.765677 TCCGTCCAAAAATACTTGTCATCAA 59.234 36.000 0.00 0.00 0.00 2.57
3030 4268 6.263392 TCCGTCCAAAAATACTTGTCATCAAA 59.737 34.615 0.00 0.00 32.87 2.69
3031 4269 6.920758 CCGTCCAAAAATACTTGTCATCAAAA 59.079 34.615 0.00 0.00 32.87 2.44
3032 4270 7.598493 CCGTCCAAAAATACTTGTCATCAAAAT 59.402 33.333 0.00 0.00 32.87 1.82
3033 4271 8.427012 CGTCCAAAAATACTTGTCATCAAAATG 58.573 33.333 0.00 0.00 32.87 2.32
3034 4272 8.711457 GTCCAAAAATACTTGTCATCAAAATGG 58.289 33.333 0.00 0.00 33.42 3.16
3035 4273 8.646004 TCCAAAAATACTTGTCATCAAAATGGA 58.354 29.630 0.00 0.00 33.42 3.41
3036 4274 9.439500 CCAAAAATACTTGTCATCAAAATGGAT 57.561 29.630 0.00 0.00 33.42 3.41
3048 4286 6.646267 CATCAAAATGGATGAAAAGGGATGT 58.354 36.000 0.00 0.00 46.00 3.06
3049 4287 7.784037 CATCAAAATGGATGAAAAGGGATGTA 58.216 34.615 0.00 0.00 46.00 2.29
3050 4288 7.976414 TCAAAATGGATGAAAAGGGATGTAT 57.024 32.000 0.00 0.00 0.00 2.29
3051 4289 8.010733 TCAAAATGGATGAAAAGGGATGTATC 57.989 34.615 0.00 0.00 0.00 2.24
3052 4290 7.840716 TCAAAATGGATGAAAAGGGATGTATCT 59.159 33.333 0.00 0.00 0.00 1.98
3053 4291 9.135189 CAAAATGGATGAAAAGGGATGTATCTA 57.865 33.333 0.00 0.00 0.00 1.98
3054 4292 8.930846 AAATGGATGAAAAGGGATGTATCTAG 57.069 34.615 0.00 0.00 0.00 2.43
3055 4293 7.878621 ATGGATGAAAAGGGATGTATCTAGA 57.121 36.000 0.00 0.00 0.00 2.43
3056 4294 7.690454 TGGATGAAAAGGGATGTATCTAGAA 57.310 36.000 0.00 0.00 0.00 2.10
3057 4295 7.509546 TGGATGAAAAGGGATGTATCTAGAAC 58.490 38.462 0.00 0.00 0.00 3.01
3058 4296 7.348274 TGGATGAAAAGGGATGTATCTAGAACT 59.652 37.037 0.00 0.00 0.00 3.01
3059 4297 8.871125 GGATGAAAAGGGATGTATCTAGAACTA 58.129 37.037 0.00 0.00 0.00 2.24
3089 4327 8.827832 ATGTCTCCTTTTATCCATTTTGATGA 57.172 30.769 0.00 0.00 0.00 2.92
3090 4328 8.055279 TGTCTCCTTTTATCCATTTTGATGAC 57.945 34.615 0.00 0.00 0.00 3.06
3091 4329 7.669304 TGTCTCCTTTTATCCATTTTGATGACA 59.331 33.333 0.00 0.00 0.00 3.58
3092 4330 8.522830 GTCTCCTTTTATCCATTTTGATGACAA 58.477 33.333 0.00 0.00 0.00 3.18
3093 4331 8.742777 TCTCCTTTTATCCATTTTGATGACAAG 58.257 33.333 0.00 0.00 37.32 3.16
3094 4332 8.421249 TCCTTTTATCCATTTTGATGACAAGT 57.579 30.769 0.00 0.00 37.32 3.16
3095 4333 9.527157 TCCTTTTATCCATTTTGATGACAAGTA 57.473 29.630 0.00 0.00 37.32 2.24
3101 4339 6.851609 TCCATTTTGATGACAAGTATTTCCG 58.148 36.000 0.00 0.00 37.32 4.30
3102 4340 6.035843 CCATTTTGATGACAAGTATTTCCGG 58.964 40.000 0.00 0.00 37.32 5.14
3103 4341 6.127758 CCATTTTGATGACAAGTATTTCCGGA 60.128 38.462 0.00 0.00 37.32 5.14
3104 4342 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
3105 4343 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
3106 4344 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
3107 4345 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
3108 4346 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
3109 4347 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
3110 4348 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
3111 4349 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
3112 4350 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
3161 4399 9.905275 GCTTTGTGCATCATCATGAGATGTTGT 62.905 40.741 23.97 0.00 46.48 3.32
3316 4554 1.035932 TCCTCTTTCTCGGGCGGTAG 61.036 60.000 0.00 0.00 0.00 3.18
3386 4624 4.759782 TGAAGCTGCTAAGTTATCCACTC 58.240 43.478 0.90 0.00 32.94 3.51
3525 4763 1.272147 CCCAAGGCAAAGCTACTTCCT 60.272 52.381 0.00 0.00 0.00 3.36
3687 4925 5.654603 TTCTGTAAATCTTCTAGTCGCCA 57.345 39.130 0.00 0.00 0.00 5.69
3692 4932 7.867909 TCTGTAAATCTTCTAGTCGCCAATATG 59.132 37.037 0.00 0.00 0.00 1.78
3696 4936 8.594881 AAATCTTCTAGTCGCCAATATGTTAG 57.405 34.615 0.00 0.00 0.00 2.34
3715 4955 6.042777 TGTTAGCAGTGCAGATAATACTGAC 58.957 40.000 19.20 0.54 43.35 3.51
3729 4969 1.552578 ACTGACAACATGGCATGCAT 58.447 45.000 26.70 13.65 33.12 3.96
3730 4970 1.475280 ACTGACAACATGGCATGCATC 59.525 47.619 26.70 20.27 33.12 3.91
3731 4971 0.818938 TGACAACATGGCATGCATCC 59.181 50.000 26.70 14.15 24.43 3.51
3992 5235 4.855340 TCCTTTTCAGTTTGTGAGGTCTT 58.145 39.130 0.00 0.00 36.21 3.01
3993 5236 5.996644 TCCTTTTCAGTTTGTGAGGTCTTA 58.003 37.500 0.00 0.00 36.21 2.10
4043 5287 8.684520 TGATGTGTGCATTGACATTTATTGATA 58.315 29.630 9.54 0.00 35.07 2.15
4044 5288 9.687210 GATGTGTGCATTGACATTTATTGATAT 57.313 29.630 9.54 0.00 35.07 1.63
4086 5335 8.902806 CCCTTATTTACAACATCTTCTGCATAA 58.097 33.333 0.00 0.00 0.00 1.90
4136 5385 8.574251 TTATCTCTCTTCTCTATGTCCTATGC 57.426 38.462 0.00 0.00 0.00 3.14
4240 5489 3.119029 CCTTATGGTTTGCAATGGAGGTG 60.119 47.826 0.00 0.00 0.00 4.00
4380 5660 5.007430 CGGACTCTGAATTGGATGAATCTTG 59.993 44.000 0.00 0.00 0.00 3.02
4409 5692 9.569167 TTGTTTGAAATCTATCTCGTGTACTAG 57.431 33.333 0.00 0.00 0.00 2.57
4410 5693 8.953313 TGTTTGAAATCTATCTCGTGTACTAGA 58.047 33.333 0.00 0.00 0.00 2.43
4417 5700 7.313740 TCTATCTCGTGTACTAGATAACCCT 57.686 40.000 0.00 0.00 34.99 4.34
4492 5776 3.920231 ATGCAGCAGTAGAATCCAAGA 57.080 42.857 0.00 0.00 0.00 3.02
4707 6010 2.110213 GTGTCCAACGACCAGGCA 59.890 61.111 0.00 0.00 38.32 4.75
4823 6137 3.779759 TGCTTGTTTTTCGATTGCTTGT 58.220 36.364 0.00 0.00 0.00 3.16
4880 6194 4.553330 TCCAACATCTTCAGTAACCTCC 57.447 45.455 0.00 0.00 0.00 4.30
4900 6214 5.762218 CCTCCAGGTGATTGATTTAGTGATC 59.238 44.000 0.00 0.00 0.00 2.92
4943 6258 6.254804 TCGTACATTTGTAATTGGATCGTCAG 59.745 38.462 0.00 0.00 31.52 3.51
4951 6266 0.250124 TTGGATCGTCAGTGCCGTTT 60.250 50.000 0.00 0.00 0.00 3.60
4957 6272 1.542472 TCGTCAGTGCCGTTTGAGATA 59.458 47.619 0.00 0.00 0.00 1.98
5017 6332 1.682323 GGATACTGTTCTCCGTCCTCC 59.318 57.143 0.00 0.00 0.00 4.30
5023 6338 0.246910 GTTCTCCGTCCTCCTGTTCC 59.753 60.000 0.00 0.00 0.00 3.62
5038 6353 3.021695 CTGTTCCCACGAGGTGTAGATA 58.978 50.000 0.00 0.00 36.75 1.98
5068 6383 2.202623 GAGAGCCCGTGTGTAGCG 60.203 66.667 0.00 0.00 0.00 4.26
5083 6398 7.117236 CCGTGTGTAGCGTATATAAATTGGATT 59.883 37.037 0.00 0.00 0.00 3.01
5106 6421 4.612412 ACGCTTCGTTTCGCCCCA 62.612 61.111 0.00 0.00 36.35 4.96
5186 6501 8.481314 ACTATCTCAGTTTATGAAGCTTGATGA 58.519 33.333 2.10 0.00 37.52 2.92
5197 6512 6.395426 TGAAGCTTGATGATTTGTTTCACT 57.605 33.333 2.10 0.00 0.00 3.41
5200 6515 4.586001 AGCTTGATGATTTGTTTCACTGGT 59.414 37.500 0.00 0.00 0.00 4.00
5249 6564 7.040340 CCATGGTACTCCTACTTAGTGTGATAG 60.040 44.444 2.57 0.00 34.23 2.08
5268 6583 7.174253 TGTGATAGTTATTCGGCAAAGTCTTTT 59.826 33.333 0.00 0.00 0.00 2.27
5312 6629 5.122869 CACACTGTCGATTTGGATGAAGAAT 59.877 40.000 0.00 0.00 0.00 2.40
5325 6642 5.939883 TGGATGAAGAATGACTTTGACGATT 59.060 36.000 0.00 0.00 39.13 3.34
5347 6664 5.447624 TTGACTAGAAATGTGAGACGACA 57.552 39.130 0.00 0.00 0.00 4.35
5429 6746 2.411031 CGACGCGTCAAGCTTTGTAAAT 60.411 45.455 35.71 0.00 45.59 1.40
5473 6790 0.541063 TGAAGGACCGTGCTGGAGTA 60.541 55.000 2.38 0.00 42.00 2.59
5515 6834 2.415893 GGCAAAATGAACTGTCCATCGG 60.416 50.000 0.00 0.00 0.00 4.18
5518 6837 3.703001 AAATGAACTGTCCATCGGTCT 57.297 42.857 0.00 0.00 34.09 3.85
5540 6859 7.904977 GGTCTAATTTATATACGATACGCACGA 59.095 37.037 0.00 0.00 34.70 4.35
5543 6862 4.934075 TTATATACGATACGCACGAGCT 57.066 40.909 2.73 0.00 39.10 4.09
5562 6881 3.075582 AGCTCTCCCATTGCATATCCATT 59.924 43.478 0.00 0.00 0.00 3.16
5584 6903 2.280524 CCTTGTGCGAACACCCGA 60.281 61.111 0.00 0.00 46.86 5.14
5625 6944 0.663153 GGCCGACCAATTGATAGTGC 59.337 55.000 7.12 2.88 35.26 4.40
5674 6996 3.007516 CGTTCCGACAAACGTGCA 58.992 55.556 8.81 0.00 45.24 4.57
5767 7089 1.180456 TTACGCCCTGACCACGAAGA 61.180 55.000 0.00 0.00 0.00 2.87
5813 7135 9.582223 CGAAGAACAAGAAAGAACTACAATAAC 57.418 33.333 0.00 0.00 0.00 1.89
5886 7225 4.463050 TGATAAAGTTGGGGTTCTGGTT 57.537 40.909 0.00 0.00 0.00 3.67
6109 7476 6.570186 CGAATTTGAATGTGAGTCCAATTGGA 60.570 38.462 23.63 23.63 43.08 3.53
6185 7567 7.972277 TGTGAAAGTTATAGACGTATGAAGTCC 59.028 37.037 0.00 0.00 39.31 3.85
6259 7657 7.564793 TCTTGTACAACACCTAATCATATGCT 58.435 34.615 3.59 0.00 0.00 3.79
6485 7884 4.637534 CGGAAAATGTGGAGATCTGTCAAT 59.362 41.667 0.00 0.00 0.00 2.57
6899 8299 8.832735 TGGGAAATGGACTTATTATATACTCCC 58.167 37.037 0.00 0.00 33.31 4.30
6900 8300 9.059023 GGGAAATGGACTTATTATATACTCCCT 57.941 37.037 0.00 0.00 31.42 4.20
6903 8303 7.899648 ATGGACTTATTATATACTCCCTCCG 57.100 40.000 0.00 0.00 0.00 4.63
6904 8304 6.797707 TGGACTTATTATATACTCCCTCCGT 58.202 40.000 0.00 0.00 0.00 4.69
6905 8305 6.888632 TGGACTTATTATATACTCCCTCCGTC 59.111 42.308 0.00 0.00 0.00 4.79
6906 8306 6.320926 GGACTTATTATATACTCCCTCCGTCC 59.679 46.154 0.00 0.00 0.00 4.79
6907 8307 6.193504 ACTTATTATATACTCCCTCCGTCCC 58.806 44.000 0.00 0.00 0.00 4.46
6908 8308 4.687262 ATTATATACTCCCTCCGTCCCA 57.313 45.455 0.00 0.00 0.00 4.37
6909 8309 4.474303 TTATATACTCCCTCCGTCCCAA 57.526 45.455 0.00 0.00 0.00 4.12
6910 8310 2.852714 TATACTCCCTCCGTCCCAAA 57.147 50.000 0.00 0.00 0.00 3.28
6911 8311 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
6912 8312 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
6913 8313 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
6914 8314 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
6915 8315 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
6916 8316 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
6917 8317 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
6918 8318 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
6919 8319 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
6920 8320 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
6921 8321 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
6922 8322 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
6923 8323 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
6924 8324 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
6925 8325 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
6926 8326 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
6927 8327 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
6928 8328 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
6929 8329 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
6930 8330 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
6931 8331 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
6939 8339 9.582431 TCTTGTCTTAGATTTGTCTAAATACGG 57.418 33.333 0.26 0.99 36.66 4.02
6940 8340 9.582431 CTTGTCTTAGATTTGTCTAAATACGGA 57.418 33.333 0.26 0.00 36.66 4.69
6942 8342 9.529325 TGTCTTAGATTTGTCTAAATACGGATG 57.471 33.333 0.26 0.00 36.66 3.51
6943 8343 9.530633 GTCTTAGATTTGTCTAAATACGGATGT 57.469 33.333 0.26 0.00 36.66 3.06
6950 8350 9.832445 ATTTGTCTAAATACGGATGTATCAAGT 57.168 29.630 0.00 0.00 40.42 3.16
6951 8351 8.867112 TTGTCTAAATACGGATGTATCAAGTC 57.133 34.615 0.00 0.00 40.42 3.01
6952 8352 8.002984 TGTCTAAATACGGATGTATCAAGTCA 57.997 34.615 0.00 0.00 40.42 3.41
6953 8353 7.919091 TGTCTAAATACGGATGTATCAAGTCAC 59.081 37.037 0.00 0.00 40.42 3.67
6954 8354 7.113124 GTCTAAATACGGATGTATCAAGTCACG 59.887 40.741 0.00 0.00 40.42 4.35
6955 8355 4.913335 ATACGGATGTATCAAGTCACGT 57.087 40.909 0.00 0.00 36.56 4.49
6956 8356 3.587797 ACGGATGTATCAAGTCACGTT 57.412 42.857 0.00 0.00 0.00 3.99
6957 8357 3.921677 ACGGATGTATCAAGTCACGTTT 58.078 40.909 0.00 0.00 0.00 3.60
6958 8358 4.312443 ACGGATGTATCAAGTCACGTTTT 58.688 39.130 0.00 0.00 0.00 2.43
6959 8359 4.151689 ACGGATGTATCAAGTCACGTTTTG 59.848 41.667 0.00 0.00 0.00 2.44
6960 8360 4.435518 CGGATGTATCAAGTCACGTTTTGG 60.436 45.833 0.00 0.00 0.00 3.28
6961 8361 4.454504 GGATGTATCAAGTCACGTTTTGGT 59.545 41.667 0.00 0.00 0.00 3.67
6962 8362 5.640357 GGATGTATCAAGTCACGTTTTGGTA 59.360 40.000 0.00 0.00 0.00 3.25
6963 8363 6.315393 GGATGTATCAAGTCACGTTTTGGTAT 59.685 38.462 0.00 0.00 0.00 2.73
6964 8364 7.148306 GGATGTATCAAGTCACGTTTTGGTATT 60.148 37.037 0.00 0.00 0.00 1.89
6965 8365 8.780846 ATGTATCAAGTCACGTTTTGGTATTA 57.219 30.769 0.00 0.00 0.00 0.98
6966 8366 8.246908 TGTATCAAGTCACGTTTTGGTATTAG 57.753 34.615 0.00 0.00 0.00 1.73
6967 8367 8.089597 TGTATCAAGTCACGTTTTGGTATTAGA 58.910 33.333 0.00 0.00 0.00 2.10
6968 8368 9.095065 GTATCAAGTCACGTTTTGGTATTAGAT 57.905 33.333 0.00 0.00 0.00 1.98
6970 8370 8.470040 TCAAGTCACGTTTTGGTATTAGATAC 57.530 34.615 0.00 0.00 35.00 2.24
6971 8371 8.089597 TCAAGTCACGTTTTGGTATTAGATACA 58.910 33.333 0.00 0.00 37.48 2.29
6972 8372 8.879759 CAAGTCACGTTTTGGTATTAGATACAT 58.120 33.333 0.00 0.00 37.48 2.29
6973 8373 8.644318 AGTCACGTTTTGGTATTAGATACATC 57.356 34.615 0.00 0.00 37.48 3.06
6974 8374 7.709613 AGTCACGTTTTGGTATTAGATACATCC 59.290 37.037 0.00 0.00 37.48 3.51
6975 8375 6.698329 TCACGTTTTGGTATTAGATACATCCG 59.302 38.462 0.00 0.00 37.48 4.18
6976 8376 6.477688 CACGTTTTGGTATTAGATACATCCGT 59.522 38.462 0.00 0.00 37.48 4.69
6977 8377 7.648908 CACGTTTTGGTATTAGATACATCCGTA 59.351 37.037 0.00 0.00 37.48 4.02
6978 8378 8.362639 ACGTTTTGGTATTAGATACATCCGTAT 58.637 33.333 1.06 0.00 41.16 3.06
6995 8395 9.439500 ACATCCGTATCTAGACTAATCTAAGAC 57.561 37.037 0.00 0.00 36.98 3.01
6996 8396 9.438228 CATCCGTATCTAGACTAATCTAAGACA 57.562 37.037 0.00 0.00 36.98 3.41
6998 8398 9.491675 TCCGTATCTAGACTAATCTAAGACAAG 57.508 37.037 0.00 0.00 36.98 3.16
6999 8399 9.491675 CCGTATCTAGACTAATCTAAGACAAGA 57.508 37.037 0.00 0.00 36.98 3.02
7007 8407 9.454859 AGACTAATCTAAGACAAGAATTTTGGG 57.545 33.333 5.68 0.00 31.46 4.12
7008 8408 9.449719 GACTAATCTAAGACAAGAATTTTGGGA 57.550 33.333 5.68 0.00 0.00 4.37
7009 8409 9.232473 ACTAATCTAAGACAAGAATTTTGGGAC 57.768 33.333 5.68 0.00 0.00 4.46
7010 8410 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
7011 8411 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
7012 8412 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
7013 8413 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
7014 8414 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
7015 8415 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
7016 8416 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
7017 8417 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
7111 8594 9.548208 TTTTGCTTTTGTGCTTTATTTTGTTAC 57.452 25.926 0.00 0.00 0.00 2.50
7130 8613 3.312736 ACAGGTGGGACAAATCAAAGT 57.687 42.857 0.00 0.00 44.16 2.66
7150 8633 0.029300 CCGCTGGTGTGTCAAACTTG 59.971 55.000 0.00 0.00 0.00 3.16
7177 8660 6.049790 ACTTCTCAAGTTCAGTGAGGTAAAC 58.950 40.000 0.00 0.00 42.37 2.01
7253 8736 5.332743 TGGCAAAGATGGAAAAGGAGTATT 58.667 37.500 0.00 0.00 0.00 1.89
7268 8751 4.929808 AGGAGTATTGTGTTCTTACGCTTG 59.070 41.667 0.00 0.00 35.77 4.01
7332 8815 6.019559 CGACGCTTGATCAGATAAAAGATGAA 60.020 38.462 8.82 0.00 0.00 2.57
7345 8828 9.183368 AGATAAAAGATGAAGAACCTGAATTCC 57.817 33.333 2.27 0.00 0.00 3.01
7347 8830 7.787623 AAAAGATGAAGAACCTGAATTCCAT 57.212 32.000 2.27 0.00 0.00 3.41
7427 8910 6.238759 GGTCAGCAATGGTATTGGATTTCTAC 60.239 42.308 3.97 0.00 0.00 2.59
7428 8911 6.318648 GTCAGCAATGGTATTGGATTTCTACA 59.681 38.462 3.97 0.00 0.00 2.74
7430 8913 6.974622 CAGCAATGGTATTGGATTTCTACAAC 59.025 38.462 3.97 0.00 0.00 3.32
7447 8930 6.732154 TCTACAACTGCTATACCGTCATAAC 58.268 40.000 0.00 0.00 0.00 1.89
7453 8936 2.669364 CTATACCGTCATAACCCGTGC 58.331 52.381 0.00 0.00 0.00 5.34
7456 8939 0.952010 ACCGTCATAACCCGTGCAAC 60.952 55.000 0.00 0.00 0.00 4.17
7467 8950 2.870372 GTGCAACGCTCATGGACC 59.130 61.111 0.00 0.00 33.54 4.46
7492 8975 3.135994 CAGGTAGGTTACTGTTTTGCGT 58.864 45.455 0.00 0.00 0.00 5.24
7493 8976 3.185797 CAGGTAGGTTACTGTTTTGCGTC 59.814 47.826 0.00 0.00 0.00 5.19
7511 8994 3.916172 GCGTCGTCTGATTTTGTGTACTA 59.084 43.478 0.00 0.00 0.00 1.82
7517 9000 5.918576 CGTCTGATTTTGTGTACTAGTGACA 59.081 40.000 5.39 5.55 0.00 3.58
7540 9023 3.054875 AGGAGCAAGTAGATGATGCACAA 60.055 43.478 0.00 0.00 42.45 3.33
7569 9053 5.841810 TGAAGTTTGTTTTGGCCATAGAAG 58.158 37.500 6.09 0.00 0.00 2.85
7571 9055 5.453567 AGTTTGTTTTGGCCATAGAAGTC 57.546 39.130 6.09 0.99 0.00 3.01
7579 9063 1.291132 GCCATAGAAGTCGGACTTGC 58.709 55.000 26.87 18.88 38.80 4.01
7584 9068 1.629043 AGAAGTCGGACTTGCTGGTA 58.371 50.000 26.87 0.00 38.80 3.25
7585 9069 1.272769 AGAAGTCGGACTTGCTGGTAC 59.727 52.381 26.87 11.14 38.80 3.34
7605 9089 5.699458 GGTACTGTTTCGATTTCTCTGGAAA 59.301 40.000 0.00 0.00 44.26 3.13
7639 9124 1.064017 TCATCTCCCCGGGATTTTTGG 60.064 52.381 26.32 2.41 0.00 3.28
7652 9137 4.306600 GGATTTTTGGTGCGTTTGAGATT 58.693 39.130 0.00 0.00 0.00 2.40
7691 9176 9.376075 CCAAAACAGAGATTATATCGAGCATAT 57.624 33.333 0.00 0.00 0.00 1.78
7696 9181 9.964303 ACAGAGATTATATCGAGCATATGATTC 57.036 33.333 6.97 2.26 0.00 2.52
7717 9202 0.245539 CAACAGGGGCTTGCAATCAG 59.754 55.000 0.00 0.00 0.00 2.90
7772 9257 3.386768 TGTCTTGTTCAGTGCTACTCC 57.613 47.619 0.00 0.00 0.00 3.85
7773 9258 2.037251 TGTCTTGTTCAGTGCTACTCCC 59.963 50.000 0.00 0.00 0.00 4.30
7778 9263 2.972713 TGTTCAGTGCTACTCCCTTTCT 59.027 45.455 0.00 0.00 0.00 2.52
7802 9287 8.432805 TCTAAGACCATATTCCTTTCCATCTTC 58.567 37.037 0.00 0.00 0.00 2.87
7803 9288 6.838401 AGACCATATTCCTTTCCATCTTCT 57.162 37.500 0.00 0.00 0.00 2.85
7804 9289 6.836242 AGACCATATTCCTTTCCATCTTCTC 58.164 40.000 0.00 0.00 0.00 2.87
7805 9290 5.615289 ACCATATTCCTTTCCATCTTCTCG 58.385 41.667 0.00 0.00 0.00 4.04
7806 9291 4.999950 CCATATTCCTTTCCATCTTCTCGG 59.000 45.833 0.00 0.00 0.00 4.63
7808 9293 6.239600 CCATATTCCTTTCCATCTTCTCGGTA 60.240 42.308 0.00 0.00 0.00 4.02
7891 9379 6.353323 TCTAGTCAATGTGGTCTTTTTCACA 58.647 36.000 0.00 0.00 46.15 3.58
7968 9458 5.047872 TGCTGACAAGTATAGTACCGTTGAA 60.048 40.000 0.00 0.00 0.00 2.69
7984 9475 4.504858 CGTTGAATACAGGCCTAAAGAGT 58.495 43.478 3.98 0.20 0.00 3.24
7986 9477 5.411669 CGTTGAATACAGGCCTAAAGAGTTT 59.588 40.000 3.98 0.00 0.00 2.66
8039 9530 3.537806 GTTTTCATCACGTGTACAACCG 58.462 45.455 16.51 0.00 0.00 4.44
8040 9531 1.785768 TTCATCACGTGTACAACCGG 58.214 50.000 16.51 0.00 0.00 5.28
8042 9533 1.340568 TCATCACGTGTACAACCGGAA 59.659 47.619 16.51 0.00 0.00 4.30
8043 9534 1.724623 CATCACGTGTACAACCGGAAG 59.275 52.381 16.51 1.51 0.00 3.46
8086 9633 4.081420 TGAGAGAGCAGAATACTGGGTTTC 60.081 45.833 0.00 0.00 43.62 2.78
8089 9636 3.525199 AGAGCAGAATACTGGGTTTCCAT 59.475 43.478 0.00 0.00 43.11 3.41
8096 9643 7.538575 CAGAATACTGGGTTTCCATAACTTTG 58.461 38.462 0.00 0.00 43.11 2.77
8116 9663 1.077915 GAGCAGAAGCAGAGCAAGAC 58.922 55.000 0.00 0.00 45.49 3.01
8165 9712 5.047306 CAGGAATACAAAAAGGAAAGGACCC 60.047 44.000 0.00 0.00 0.00 4.46
8180 9727 2.766828 AGGACCCTGATAAGTGCTACAC 59.233 50.000 0.00 0.00 32.36 2.90
8187 9734 2.297880 TGATAAGTGCTACACGTGTGGT 59.702 45.455 30.83 14.24 39.64 4.16
8193 9740 2.410730 GTGCTACACGTGTGGTATGAAC 59.589 50.000 30.83 17.03 34.19 3.18
8195 9742 2.410730 GCTACACGTGTGGTATGAACAC 59.589 50.000 30.83 8.75 43.62 3.32
8211 9758 1.167851 ACACATGGCAACTCCGAATG 58.832 50.000 0.00 0.00 37.80 2.67
8217 9764 3.090952 TGGCAACTCCGAATGTTTTTG 57.909 42.857 0.00 0.00 37.80 2.44
8234 9781 6.039616 TGTTTTTGATGGCAAGTTTAGTGAC 58.960 36.000 0.00 0.00 35.04 3.67
8235 9782 5.843673 TTTTGATGGCAAGTTTAGTGACA 57.156 34.783 0.00 0.00 38.70 3.58
8236 9783 4.829064 TTGATGGCAAGTTTAGTGACAC 57.171 40.909 0.00 0.00 36.66 3.67
8252 9799 2.037902 TGACACGAGGATGGCAACTTTA 59.962 45.455 0.00 0.00 33.52 1.85
8253 9800 2.673368 GACACGAGGATGGCAACTTTAG 59.327 50.000 0.00 0.00 37.61 1.85
8254 9801 2.038557 ACACGAGGATGGCAACTTTAGT 59.961 45.455 0.00 0.00 37.61 2.24
8280 9828 4.053295 CAAGCATGACAACTTCTTTTGGG 58.947 43.478 0.00 0.00 0.00 4.12
8284 9832 4.022068 GCATGACAACTTCTTTTGGGATGA 60.022 41.667 0.00 0.00 0.00 2.92
8354 9902 9.563898 GGCAATTTTAGTATAGTAAAAAGCGTT 57.436 29.630 26.68 17.31 37.59 4.84
8371 9919 1.868498 CGTTAAAACCGGAGTGCTTCA 59.132 47.619 9.46 0.00 0.00 3.02
8376 9924 3.197790 CCGGAGTGCTTCATGCCG 61.198 66.667 0.00 0.00 42.00 5.69
8379 9927 1.421410 CGGAGTGCTTCATGCCGTAC 61.421 60.000 0.00 0.00 42.00 3.67
8383 9931 2.387445 TGCTTCATGCCGTACGTGC 61.387 57.895 15.21 16.94 42.00 5.34
8384 9932 3.089784 CTTCATGCCGTACGTGCC 58.910 61.111 20.88 8.20 35.07 5.01
8385 9933 2.798501 CTTCATGCCGTACGTGCCG 61.799 63.158 20.88 14.22 35.07 5.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 1.163420 AATCGTTCAACGTGCTGGCA 61.163 50.000 10.31 0.00 43.14 4.92
46 47 2.094234 TGATTTCAGCGGATCGTCTCAA 60.094 45.455 0.00 0.00 0.00 3.02
109 110 5.857268 TCTGTTGTCAATTCTCATCAGTCA 58.143 37.500 12.91 0.00 34.76 3.41
138 139 8.737175 TCAGTCTTGATACTTAATGAGTAACGT 58.263 33.333 0.00 0.00 43.76 3.99
176 177 3.452264 ACAGTAGCTAGGAACATGCATCA 59.548 43.478 0.00 0.00 0.00 3.07
264 265 1.086634 GCATCCTGAAGCGTGAGGAC 61.087 60.000 10.41 0.00 41.27 3.85
288 289 2.360852 GACCTCGAGACCGTCCCA 60.361 66.667 15.71 0.00 37.05 4.37
385 392 1.745115 TGCTCGCCGAAATTCCCTG 60.745 57.895 0.00 0.00 0.00 4.45
714 721 1.464608 CACCACAACATAACTCGCCAG 59.535 52.381 0.00 0.00 0.00 4.85
721 728 4.142469 GGCTCATTACCACCACAACATAAC 60.142 45.833 0.00 0.00 0.00 1.89
727 734 0.322098 CCGGCTCATTACCACCACAA 60.322 55.000 0.00 0.00 0.00 3.33
797 804 2.049063 GCCGTGAAGAGACGTGCT 60.049 61.111 0.00 0.00 37.66 4.40
798 805 3.470567 CGCCGTGAAGAGACGTGC 61.471 66.667 0.00 0.00 37.66 5.34
799 806 2.050351 ACGCCGTGAAGAGACGTG 60.050 61.111 0.00 0.00 37.66 4.49
800 807 2.050351 CACGCCGTGAAGAGACGT 60.050 61.111 12.85 0.00 37.66 4.34
801 808 1.797933 CTCACGCCGTGAAGAGACG 60.798 63.158 21.56 4.41 42.26 4.18
802 809 1.444553 CCTCACGCCGTGAAGAGAC 60.445 63.158 21.56 0.00 42.26 3.36
803 810 2.962569 CCTCACGCCGTGAAGAGA 59.037 61.111 21.56 0.00 42.26 3.10
804 811 2.811317 GCCTCACGCCGTGAAGAG 60.811 66.667 21.56 13.48 42.26 2.85
805 812 4.717629 CGCCTCACGCCGTGAAGA 62.718 66.667 21.56 0.00 42.26 2.87
938 1691 5.621555 CGGACGATCAGAAAAGTAGAGGAAA 60.622 44.000 0.00 0.00 0.00 3.13
939 1692 4.142447 CGGACGATCAGAAAAGTAGAGGAA 60.142 45.833 0.00 0.00 0.00 3.36
940 1693 3.377485 CGGACGATCAGAAAAGTAGAGGA 59.623 47.826 0.00 0.00 0.00 3.71
941 1694 3.377485 TCGGACGATCAGAAAAGTAGAGG 59.623 47.826 0.00 0.00 0.00 3.69
943 1696 3.181499 GCTCGGACGATCAGAAAAGTAGA 60.181 47.826 0.00 0.00 0.00 2.59
944 1697 3.109619 GCTCGGACGATCAGAAAAGTAG 58.890 50.000 0.00 0.00 0.00 2.57
946 1699 1.272490 TGCTCGGACGATCAGAAAAGT 59.728 47.619 0.00 0.00 0.00 2.66
947 1700 1.923204 CTGCTCGGACGATCAGAAAAG 59.077 52.381 17.70 0.00 39.82 2.27
948 1701 1.404181 CCTGCTCGGACGATCAGAAAA 60.404 52.381 22.53 0.00 39.82 2.29
949 1702 0.173481 CCTGCTCGGACGATCAGAAA 59.827 55.000 22.53 0.00 39.82 2.52
1220 1997 1.668101 CGTAGCCCTCTCTCCGCTTT 61.668 60.000 0.00 0.00 34.03 3.51
1247 2024 1.176527 CGCCATTGGATTCCAACAGT 58.823 50.000 20.21 2.13 46.95 3.55
1306 2083 2.380064 TGAACTGGAAGGTGGCAAAT 57.620 45.000 0.00 0.00 39.30 2.32
1310 2087 2.161609 CGTTATTGAACTGGAAGGTGGC 59.838 50.000 0.00 0.00 39.30 5.01
1311 2088 3.188460 CACGTTATTGAACTGGAAGGTGG 59.812 47.826 0.00 0.00 39.30 4.61
1312 2089 3.813166 ACACGTTATTGAACTGGAAGGTG 59.187 43.478 0.00 0.00 41.25 4.00
1313 2090 4.081322 ACACGTTATTGAACTGGAAGGT 57.919 40.909 0.00 0.00 39.30 3.50
1314 2091 5.235516 AGTACACGTTATTGAACTGGAAGG 58.764 41.667 0.00 0.00 39.30 3.46
1315 2092 5.347907 GGAGTACACGTTATTGAACTGGAAG 59.652 44.000 0.00 0.00 42.29 3.46
1316 2093 5.221481 TGGAGTACACGTTATTGAACTGGAA 60.221 40.000 0.00 0.00 33.01 3.53
1333 2110 2.289694 ACTTGGTGCATCAGTGGAGTAC 60.290 50.000 0.00 0.00 0.00 2.73
1341 2169 7.066284 GCCCTAATAATATACTTGGTGCATCAG 59.934 40.741 0.00 0.00 0.00 2.90
1455 2289 5.182950 TGACAGAAGCAGAACAAGTTCAAAA 59.817 36.000 14.69 0.00 41.84 2.44
1470 2304 5.491635 AGACAAAAGAACTTGACAGAAGC 57.508 39.130 0.00 0.00 0.00 3.86
1471 2305 8.883731 TCTTAAGACAAAAGAACTTGACAGAAG 58.116 33.333 0.00 0.00 30.15 2.85
1472 2306 8.786826 TCTTAAGACAAAAGAACTTGACAGAA 57.213 30.769 0.00 0.00 30.15 3.02
1473 2307 7.011482 GCTCTTAAGACAAAAGAACTTGACAGA 59.989 37.037 0.00 0.00 32.77 3.41
1474 2308 7.128976 GCTCTTAAGACAAAAGAACTTGACAG 58.871 38.462 0.00 0.00 32.77 3.51
1475 2309 6.238103 CGCTCTTAAGACAAAAGAACTTGACA 60.238 38.462 0.00 0.00 32.77 3.58
1476 2310 6.130058 CGCTCTTAAGACAAAAGAACTTGAC 58.870 40.000 0.00 0.00 32.77 3.18
1477 2311 5.815740 ACGCTCTTAAGACAAAAGAACTTGA 59.184 36.000 0.00 0.00 32.77 3.02
1479 2313 6.679327 AACGCTCTTAAGACAAAAGAACTT 57.321 33.333 0.00 0.00 32.77 2.66
1534 2369 1.280886 CCGAGCTATCATGCAGACGC 61.281 60.000 0.00 0.00 39.24 5.19
1558 2393 2.094286 AGCGACAACTTCATCAGAGAGG 60.094 50.000 0.00 0.00 0.00 3.69
1627 2462 5.534207 AGCAACAATTGTGAGGAATTCAA 57.466 34.783 12.82 0.00 37.61 2.69
1774 2801 7.913789 AGGAATGGTAAGTTACAGACAATGTA 58.086 34.615 14.81 0.00 43.66 2.29
1779 2806 6.182507 ACAAGGAATGGTAAGTTACAGACA 57.817 37.500 14.81 4.37 0.00 3.41
1824 2853 4.408182 AGATTAGGAAAGGTGGATCACG 57.592 45.455 0.00 0.00 34.83 4.35
2000 3029 1.897560 CCAACTCCTCCAAGACCAAC 58.102 55.000 0.00 0.00 0.00 3.77
2093 3122 4.990526 ACTCCAGGTTGACATCTGAAAAT 58.009 39.130 7.61 0.00 33.11 1.82
2144 3178 7.719778 AATGGAAATTTCAAAAGCTCTGAAC 57.280 32.000 19.49 0.00 32.61 3.18
2186 3220 5.488262 TGTGCATCTACTATATGGCATGT 57.512 39.130 10.98 6.03 0.00 3.21
2432 3665 1.408702 CAATATGCTTTTGGGGTCCCG 59.591 52.381 0.48 0.00 39.42 5.14
2608 3841 9.736023 CAGGTTTGGTATCAGAATTATTTAAGC 57.264 33.333 0.00 0.00 0.00 3.09
2714 3948 8.636213 AGGATTTAGAGCATAACATGGAAAATG 58.364 33.333 0.00 0.00 0.00 2.32
2720 3954 5.639506 CGGTAGGATTTAGAGCATAACATGG 59.360 44.000 0.00 0.00 0.00 3.66
2988 4226 3.029570 ACGGAGGGAGTAGATACCAAAC 58.970 50.000 0.00 0.00 31.98 2.93
2992 4230 1.144503 TGGACGGAGGGAGTAGATACC 59.855 57.143 0.00 0.00 0.00 2.73
2993 4231 2.653234 TGGACGGAGGGAGTAGATAC 57.347 55.000 0.00 0.00 0.00 2.24
2995 4233 2.544844 TTTGGACGGAGGGAGTAGAT 57.455 50.000 0.00 0.00 0.00 1.98
2996 4234 2.314071 TTTTGGACGGAGGGAGTAGA 57.686 50.000 0.00 0.00 0.00 2.59
2997 4235 3.629142 ATTTTTGGACGGAGGGAGTAG 57.371 47.619 0.00 0.00 0.00 2.57
2998 4236 4.098894 AGTATTTTTGGACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
2999 4237 2.910977 AGTATTTTTGGACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
3000 4238 3.629142 AGTATTTTTGGACGGAGGGAG 57.371 47.619 0.00 0.00 0.00 4.30
3001 4239 3.073356 ACAAGTATTTTTGGACGGAGGGA 59.927 43.478 0.00 0.00 32.32 4.20
3002 4240 3.418047 ACAAGTATTTTTGGACGGAGGG 58.582 45.455 0.00 0.00 32.32 4.30
3003 4241 4.069304 TGACAAGTATTTTTGGACGGAGG 58.931 43.478 0.00 0.00 32.32 4.30
3004 4242 5.411361 TGATGACAAGTATTTTTGGACGGAG 59.589 40.000 0.00 0.00 32.32 4.63
3005 4243 5.309638 TGATGACAAGTATTTTTGGACGGA 58.690 37.500 0.00 0.00 32.32 4.69
3006 4244 5.621197 TGATGACAAGTATTTTTGGACGG 57.379 39.130 0.00 0.00 32.32 4.79
3007 4245 7.922505 TTTTGATGACAAGTATTTTTGGACG 57.077 32.000 0.00 0.00 37.32 4.79
3008 4246 8.711457 CCATTTTGATGACAAGTATTTTTGGAC 58.289 33.333 0.00 0.00 37.32 4.02
3009 4247 8.646004 TCCATTTTGATGACAAGTATTTTTGGA 58.354 29.630 0.00 0.00 37.32 3.53
3010 4248 8.830201 TCCATTTTGATGACAAGTATTTTTGG 57.170 30.769 0.00 0.00 37.32 3.28
3024 4262 6.646267 ACATCCCTTTTCATCCATTTTGATG 58.354 36.000 0.00 0.00 42.84 3.07
3025 4263 6.879367 ACATCCCTTTTCATCCATTTTGAT 57.121 33.333 0.00 0.00 0.00 2.57
3026 4264 7.840716 AGATACATCCCTTTTCATCCATTTTGA 59.159 33.333 0.00 0.00 0.00 2.69
3027 4265 8.015185 AGATACATCCCTTTTCATCCATTTTG 57.985 34.615 0.00 0.00 0.00 2.44
3028 4266 9.359653 CTAGATACATCCCTTTTCATCCATTTT 57.640 33.333 0.00 0.00 0.00 1.82
3029 4267 8.727149 TCTAGATACATCCCTTTTCATCCATTT 58.273 33.333 0.00 0.00 0.00 2.32
3030 4268 8.280258 TCTAGATACATCCCTTTTCATCCATT 57.720 34.615 0.00 0.00 0.00 3.16
3031 4269 7.878621 TCTAGATACATCCCTTTTCATCCAT 57.121 36.000 0.00 0.00 0.00 3.41
3032 4270 7.348274 AGTTCTAGATACATCCCTTTTCATCCA 59.652 37.037 0.00 0.00 0.00 3.41
3033 4271 7.740805 AGTTCTAGATACATCCCTTTTCATCC 58.259 38.462 0.00 0.00 0.00 3.51
3063 4301 9.919416 TCATCAAAATGGATAAAAGGAGACATA 57.081 29.630 0.00 0.00 33.42 2.29
3064 4302 8.689972 GTCATCAAAATGGATAAAAGGAGACAT 58.310 33.333 0.00 0.00 33.42 3.06
3065 4303 7.669304 TGTCATCAAAATGGATAAAAGGAGACA 59.331 33.333 0.00 0.00 33.42 3.41
3066 4304 8.055279 TGTCATCAAAATGGATAAAAGGAGAC 57.945 34.615 0.00 0.00 33.42 3.36
3067 4305 8.648698 TTGTCATCAAAATGGATAAAAGGAGA 57.351 30.769 0.00 0.00 33.42 3.71
3068 4306 8.526147 ACTTGTCATCAAAATGGATAAAAGGAG 58.474 33.333 0.00 0.00 33.42 3.69
3069 4307 8.421249 ACTTGTCATCAAAATGGATAAAAGGA 57.579 30.769 0.00 0.00 33.42 3.36
3075 4313 8.620416 CGGAAATACTTGTCATCAAAATGGATA 58.380 33.333 0.00 0.00 33.42 2.59
3076 4314 7.416664 CCGGAAATACTTGTCATCAAAATGGAT 60.417 37.037 0.00 0.00 33.42 3.41
3077 4315 6.127758 CCGGAAATACTTGTCATCAAAATGGA 60.128 38.462 0.00 0.00 33.42 3.41
3078 4316 6.035843 CCGGAAATACTTGTCATCAAAATGG 58.964 40.000 0.00 0.00 33.42 3.16
3079 4317 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
3080 4318 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
3081 4319 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
3082 4320 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
3083 4321 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
3084 4322 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
3085 4323 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
3086 4324 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
3087 4325 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
3088 4326 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
3089 4327 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
3090 4328 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
3091 4329 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
3092 4330 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
3093 4331 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
3094 4332 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
3095 4333 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
3096 4334 0.682209 CTACTCCCTCCGTCCGGAAA 60.682 60.000 5.23 0.00 44.66 3.13
3097 4335 1.077212 CTACTCCCTCCGTCCGGAA 60.077 63.158 5.23 0.00 44.66 4.30
3098 4336 1.856539 AACTACTCCCTCCGTCCGGA 61.857 60.000 0.00 0.00 42.90 5.14
3099 4337 0.107017 TAACTACTCCCTCCGTCCGG 60.107 60.000 0.00 0.00 0.00 5.14
3100 4338 1.403323 GTTAACTACTCCCTCCGTCCG 59.597 57.143 0.00 0.00 0.00 4.79
3101 4339 2.732763 AGTTAACTACTCCCTCCGTCC 58.267 52.381 6.26 0.00 28.23 4.79
3102 4340 6.462552 AATTAGTTAACTACTCCCTCCGTC 57.537 41.667 14.96 0.00 38.33 4.79
3103 4341 6.438425 TCAAATTAGTTAACTACTCCCTCCGT 59.562 38.462 14.96 0.00 38.33 4.69
3104 4342 6.870769 TCAAATTAGTTAACTACTCCCTCCG 58.129 40.000 14.96 0.00 38.33 4.63
3300 4538 2.353357 TATCTACCGCCCGAGAAAGA 57.647 50.000 0.00 0.00 0.00 2.52
3316 4554 8.999431 TGGTCTTTAGAACAAGTTGTCAATATC 58.001 33.333 9.40 2.66 39.09 1.63
3386 4624 8.131100 CCTTATTTACAATTACAGCACATCCAG 58.869 37.037 0.00 0.00 0.00 3.86
3430 4668 1.884579 CAGCCGATACCGTACCTACAT 59.115 52.381 0.00 0.00 0.00 2.29
3525 4763 5.433526 TCCTCTTCTTTCGAACCTTGAAAA 58.566 37.500 0.00 0.00 35.11 2.29
3676 4914 5.163447 ACTGCTAACATATTGGCGACTAGAA 60.163 40.000 0.00 0.00 44.90 2.10
3687 4925 9.212641 CAGTATTATCTGCACTGCTAACATATT 57.787 33.333 1.98 0.00 33.86 1.28
3692 4932 6.042777 TGTCAGTATTATCTGCACTGCTAAC 58.957 40.000 1.98 0.00 39.60 2.34
3696 4936 4.631377 TGTTGTCAGTATTATCTGCACTGC 59.369 41.667 0.00 0.00 39.60 4.40
3715 4955 1.107945 TGAGGATGCATGCCATGTTG 58.892 50.000 16.68 0.00 33.29 3.33
4059 5303 5.652014 TGCAGAAGATGTTGTAAATAAGGGG 59.348 40.000 0.00 0.00 0.00 4.79
4136 5385 0.674895 GTGCTGCCCCTACTCAAGTG 60.675 60.000 0.00 0.00 0.00 3.16
4240 5489 5.552178 AGAGGACTTCACAAGAAATGTACC 58.448 41.667 0.00 0.00 41.46 3.34
4380 5660 9.314501 GTACACGAGATAGATTTCAAACAAAAC 57.685 33.333 0.00 0.00 0.00 2.43
4409 5692 6.601332 TGAAGGTGAATCCAATAGGGTTATC 58.399 40.000 0.00 0.00 38.73 1.75
4410 5693 6.590656 TGAAGGTGAATCCAATAGGGTTAT 57.409 37.500 0.00 0.00 38.73 1.89
4417 5700 9.177608 CAGACTAATTTGAAGGTGAATCCAATA 57.822 33.333 0.00 0.00 39.02 1.90
4492 5776 5.418676 CAACACCTTTTGACTTGGATTTGT 58.581 37.500 0.00 0.00 0.00 2.83
4666 5968 4.080186 ACACAAAGTACACTAAGTTGGGGT 60.080 41.667 0.00 0.00 0.00 4.95
4667 5969 4.274950 CACACAAAGTACACTAAGTTGGGG 59.725 45.833 0.00 0.00 0.00 4.96
4707 6010 0.966179 GGGGTTTGATTGCGGTCTTT 59.034 50.000 0.00 0.00 0.00 2.52
4880 6194 4.813161 AGCGATCACTAAATCAATCACCTG 59.187 41.667 0.00 0.00 0.00 4.00
4884 6198 5.051039 GCGTTAGCGATCACTAAATCAATCA 60.051 40.000 2.07 0.00 41.33 2.57
4943 6258 4.270084 TCATCGAAATATCTCAAACGGCAC 59.730 41.667 0.00 0.00 0.00 5.01
4975 6290 4.909678 TGGCCGACCAATTGACAA 57.090 50.000 7.12 0.00 45.37 3.18
5017 6332 1.254026 TCTACACCTCGTGGGAACAG 58.746 55.000 8.63 0.00 44.46 3.16
5023 6338 4.459337 TGCATATCTATCTACACCTCGTGG 59.541 45.833 0.99 0.99 37.94 4.94
5038 6353 2.875094 GGCTCTCCCATTGCATATCT 57.125 50.000 0.00 0.00 0.00 1.98
5062 6377 9.214957 CCTTCAATCCAATTTATATACGCTACA 57.785 33.333 0.00 0.00 0.00 2.74
5065 6380 7.117812 CGTCCTTCAATCCAATTTATATACGCT 59.882 37.037 0.00 0.00 0.00 5.07
5068 6383 8.324163 AGCGTCCTTCAATCCAATTTATATAC 57.676 34.615 0.00 0.00 0.00 1.47
5083 6398 1.554042 GCGAAACGAAGCGTCCTTCA 61.554 55.000 8.95 0.00 46.25 3.02
5106 6421 6.012745 AGAGTTAATTTCTTGAGCCAACCAT 58.987 36.000 0.00 0.00 0.00 3.55
5197 6512 3.069016 ACTGTTGTCAACTATCACGACCA 59.931 43.478 16.45 0.00 0.00 4.02
5200 6515 4.546570 CAGACTGTTGTCAACTATCACGA 58.453 43.478 16.45 0.00 45.20 4.35
5208 6523 1.267806 CCATGGCAGACTGTTGTCAAC 59.732 52.381 8.86 8.86 45.20 3.18
5249 6564 5.398416 GTCACAAAAGACTTTGCCGAATAAC 59.602 40.000 0.06 0.00 44.96 1.89
5268 6583 5.239306 GTGTGATTCTCATCAAAAGGTCACA 59.761 40.000 0.00 0.00 41.30 3.58
5312 6629 7.441157 ACATTTCTAGTCAAATCGTCAAAGTCA 59.559 33.333 0.00 0.00 0.00 3.41
5325 6642 5.447624 TGTCGTCTCACATTTCTAGTCAA 57.552 39.130 0.00 0.00 0.00 3.18
5347 6664 3.892284 ACTCCTACTCAGTGTGATCGAT 58.108 45.455 0.00 0.00 0.00 3.59
5356 6673 2.292257 TGCCATGGTACTCCTACTCAGT 60.292 50.000 14.67 0.00 34.23 3.41
5429 6746 7.694784 CACGTTTTCAAAAAGCTACTACTTCAA 59.305 33.333 0.00 0.00 0.00 2.69
5473 6790 1.202348 GCGTGGCTGGCTAAAGAATTT 59.798 47.619 2.00 0.00 43.42 1.82
5515 6834 8.811794 TCGTGCGTATCGTATATAAATTAGAC 57.188 34.615 0.00 0.00 0.00 2.59
5518 6837 7.466805 AGCTCGTGCGTATCGTATATAAATTA 58.533 34.615 3.48 0.00 45.42 1.40
5540 6859 2.060275 TGGATATGCAATGGGAGAGCT 58.940 47.619 0.00 0.00 0.00 4.09
5543 6862 5.769662 GTGTAAATGGATATGCAATGGGAGA 59.230 40.000 0.00 0.00 0.00 3.71
5584 6903 4.807304 CCACTGCGTATACTATTTTCCGTT 59.193 41.667 0.56 0.00 0.00 4.44
5625 6944 5.447279 CGTTAGGGTTCCTTTGATGAAATCG 60.447 44.000 0.00 0.00 39.88 3.34
5674 6996 2.983604 TTGCTAACGCGCAAAGTCGTT 61.984 47.619 5.73 4.63 46.00 3.85
5749 7071 0.968901 ATCTTCGTGGTCAGGGCGTA 60.969 55.000 0.00 0.00 0.00 4.42
5754 7076 3.243907 GGGATTAGATCTTCGTGGTCAGG 60.244 52.174 0.00 0.00 0.00 3.86
5767 7089 3.144506 CGATTGCTTGCAGGGATTAGAT 58.855 45.455 0.00 0.00 0.00 1.98
5886 7225 5.741011 AGTAGTCTTTCTTTGTGTCCAACA 58.259 37.500 0.00 0.00 36.85 3.33
6185 7567 1.202348 TCAGACTGCACAGACATACCG 59.798 52.381 4.31 0.00 0.00 4.02
6259 7657 9.373603 CCAATCAAGAATGATGATAAAGCAAAA 57.626 29.630 0.00 0.00 45.60 2.44
6485 7884 2.254546 ACCGAACAAGCATCAGTTCA 57.745 45.000 0.00 0.00 43.20 3.18
6893 8293 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
6894 8294 1.004394 GAATTTTGGGACGGAGGGAGT 59.996 52.381 0.00 0.00 0.00 3.85
6895 8295 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
6896 8296 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
6897 8297 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
6898 8298 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
6899 8299 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
6900 8300 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
6901 8301 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
6902 8302 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
6903 8303 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
6904 8304 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
6905 8305 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
6913 8313 9.582431 CCGTATTTAGACAAATCTAAGACAAGA 57.418 33.333 9.81 0.00 45.93 3.02
6914 8314 9.582431 TCCGTATTTAGACAAATCTAAGACAAG 57.418 33.333 9.81 3.88 45.93 3.16
6916 8316 9.529325 CATCCGTATTTAGACAAATCTAAGACA 57.471 33.333 9.81 0.00 45.93 3.41
6917 8317 9.530633 ACATCCGTATTTAGACAAATCTAAGAC 57.469 33.333 0.00 0.83 45.93 3.01
6924 8324 9.832445 ACTTGATACATCCGTATTTAGACAAAT 57.168 29.630 0.00 0.00 38.48 2.32
6925 8325 9.309516 GACTTGATACATCCGTATTTAGACAAA 57.690 33.333 0.00 0.00 38.48 2.83
6926 8326 8.471609 TGACTTGATACATCCGTATTTAGACAA 58.528 33.333 0.00 0.00 38.48 3.18
6927 8327 7.919091 GTGACTTGATACATCCGTATTTAGACA 59.081 37.037 0.00 0.00 38.48 3.41
6928 8328 7.113124 CGTGACTTGATACATCCGTATTTAGAC 59.887 40.741 0.00 0.00 38.48 2.59
6929 8329 7.136772 CGTGACTTGATACATCCGTATTTAGA 58.863 38.462 0.00 0.00 38.48 2.10
6930 8330 6.916387 ACGTGACTTGATACATCCGTATTTAG 59.084 38.462 0.00 0.00 38.48 1.85
6931 8331 6.798482 ACGTGACTTGATACATCCGTATTTA 58.202 36.000 0.00 0.00 38.48 1.40
6932 8332 5.657474 ACGTGACTTGATACATCCGTATTT 58.343 37.500 0.00 0.00 38.48 1.40
6933 8333 5.258456 ACGTGACTTGATACATCCGTATT 57.742 39.130 0.00 0.00 38.48 1.89
6934 8334 4.913335 ACGTGACTTGATACATCCGTAT 57.087 40.909 0.00 0.00 41.16 3.06
6935 8335 4.707030 AACGTGACTTGATACATCCGTA 57.293 40.909 0.00 0.00 0.00 4.02
6936 8336 3.587797 AACGTGACTTGATACATCCGT 57.412 42.857 0.00 0.00 0.00 4.69
6937 8337 4.435518 CCAAAACGTGACTTGATACATCCG 60.436 45.833 6.81 0.00 0.00 4.18
6938 8338 4.454504 ACCAAAACGTGACTTGATACATCC 59.545 41.667 6.81 0.00 0.00 3.51
6939 8339 5.607119 ACCAAAACGTGACTTGATACATC 57.393 39.130 6.81 0.00 0.00 3.06
6940 8340 7.681939 AATACCAAAACGTGACTTGATACAT 57.318 32.000 6.81 0.00 0.00 2.29
6941 8341 8.089597 TCTAATACCAAAACGTGACTTGATACA 58.910 33.333 6.81 0.00 0.00 2.29
6942 8342 8.470040 TCTAATACCAAAACGTGACTTGATAC 57.530 34.615 6.81 0.00 0.00 2.24
6944 8344 9.095065 GTATCTAATACCAAAACGTGACTTGAT 57.905 33.333 6.81 0.00 0.00 2.57
6945 8345 8.089597 TGTATCTAATACCAAAACGTGACTTGA 58.910 33.333 6.81 0.00 34.86 3.02
6946 8346 8.246908 TGTATCTAATACCAAAACGTGACTTG 57.753 34.615 0.00 0.00 34.86 3.16
6947 8347 9.095065 GATGTATCTAATACCAAAACGTGACTT 57.905 33.333 0.00 0.00 34.86 3.01
6948 8348 7.709613 GGATGTATCTAATACCAAAACGTGACT 59.290 37.037 0.00 0.00 34.86 3.41
6949 8349 7.306399 CGGATGTATCTAATACCAAAACGTGAC 60.306 40.741 0.00 0.00 34.86 3.67
6950 8350 6.698329 CGGATGTATCTAATACCAAAACGTGA 59.302 38.462 0.00 0.00 34.86 4.35
6951 8351 6.477688 ACGGATGTATCTAATACCAAAACGTG 59.522 38.462 0.00 0.00 34.86 4.49
6952 8352 6.576185 ACGGATGTATCTAATACCAAAACGT 58.424 36.000 0.00 0.00 34.86 3.99
6953 8353 8.752766 ATACGGATGTATCTAATACCAAAACG 57.247 34.615 0.00 0.00 36.56 3.60
6969 8369 9.439500 GTCTTAGATTAGTCTAGATACGGATGT 57.561 37.037 0.00 0.00 38.17 3.06
6970 8370 9.438228 TGTCTTAGATTAGTCTAGATACGGATG 57.562 37.037 0.00 0.00 38.17 3.51
6972 8372 9.491675 CTTGTCTTAGATTAGTCTAGATACGGA 57.508 37.037 0.00 0.00 38.17 4.69
6973 8373 9.491675 TCTTGTCTTAGATTAGTCTAGATACGG 57.508 37.037 0.00 0.00 38.17 4.02
6981 8381 9.454859 CCCAAAATTCTTGTCTTAGATTAGTCT 57.545 33.333 0.00 0.00 38.52 3.24
6982 8382 9.449719 TCCCAAAATTCTTGTCTTAGATTAGTC 57.550 33.333 0.00 0.00 0.00 2.59
6983 8383 9.232473 GTCCCAAAATTCTTGTCTTAGATTAGT 57.768 33.333 0.00 0.00 0.00 2.24
6984 8384 8.391106 CGTCCCAAAATTCTTGTCTTAGATTAG 58.609 37.037 0.00 0.00 0.00 1.73
6985 8385 7.335924 CCGTCCCAAAATTCTTGTCTTAGATTA 59.664 37.037 0.00 0.00 0.00 1.75
6986 8386 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
6987 8387 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
6988 8388 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
6989 8389 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
6990 8390 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
6991 8391 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
6992 8392 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
6993 8393 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
6994 8394 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
6995 8395 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
6996 8396 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
6997 8397 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
6998 8398 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
6999 8399 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
7000 8400 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
7001 8401 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
7002 8402 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
7003 8403 0.115745 AAGTACTCCCTCCGTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
7004 8404 1.002069 TAAGTACTCCCTCCGTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
7005 8405 1.753649 GTTAAGTACTCCCTCCGTCCC 59.246 57.143 0.00 0.00 0.00 4.46
7006 8406 2.732763 AGTTAAGTACTCCCTCCGTCC 58.267 52.381 0.00 0.00 28.23 4.79
7007 8407 4.381398 GGAAAGTTAAGTACTCCCTCCGTC 60.381 50.000 0.00 0.00 35.54 4.79
7008 8408 3.513119 GGAAAGTTAAGTACTCCCTCCGT 59.487 47.826 0.00 0.00 35.54 4.69
7009 8409 3.512724 TGGAAAGTTAAGTACTCCCTCCG 59.487 47.826 0.00 0.00 35.54 4.63
7010 8410 5.695424 ATGGAAAGTTAAGTACTCCCTCC 57.305 43.478 0.00 0.00 35.54 4.30
7083 8566 7.588512 ACAAAATAAAGCACAAAAGCAAAACA 58.411 26.923 0.00 0.00 36.85 2.83
7094 8577 5.221342 CCCACCTGTAACAAAATAAAGCACA 60.221 40.000 0.00 0.00 0.00 4.57
7111 8594 2.558359 GGACTTTGATTTGTCCCACCTG 59.442 50.000 0.00 0.00 45.03 4.00
7130 8613 0.107410 AAGTTTGACACACCAGCGGA 60.107 50.000 1.50 0.00 0.00 5.54
7132 8615 1.013596 TCAAGTTTGACACACCAGCG 58.986 50.000 0.00 0.00 31.01 5.18
7150 8633 6.031751 ACCTCACTGAACTTGAGAAGTATC 57.968 41.667 0.83 0.00 42.81 2.24
7177 8660 7.615582 AATGTCAGTTATCAAGTACACATGG 57.384 36.000 0.00 0.00 0.00 3.66
7253 8736 2.902705 AGGTCAAGCGTAAGAACACA 57.097 45.000 0.00 0.00 43.02 3.72
7268 8751 1.889170 CCTGCAGGGAAAGAAAAGGTC 59.111 52.381 26.14 0.00 37.23 3.85
7332 8815 2.905415 TGGCATGGAATTCAGGTTCT 57.095 45.000 7.93 0.00 0.00 3.01
7345 8828 0.597568 ACACGTGAAACCATGGCATG 59.402 50.000 25.01 20.56 0.00 4.06
7347 8830 1.169661 GGACACGTGAAACCATGGCA 61.170 55.000 25.01 0.00 29.16 4.92
7413 8896 8.989980 GGTATAGCAGTTGTAGAAATCCAATAC 58.010 37.037 0.00 0.00 0.00 1.89
7427 8910 4.056050 GGGTTATGACGGTATAGCAGTTG 58.944 47.826 2.37 0.00 0.00 3.16
7428 8911 3.243636 CGGGTTATGACGGTATAGCAGTT 60.244 47.826 2.37 0.00 0.00 3.16
7430 8913 2.295349 ACGGGTTATGACGGTATAGCAG 59.705 50.000 2.37 0.00 0.00 4.24
7447 8930 3.803082 CCATGAGCGTTGCACGGG 61.803 66.667 10.02 0.00 42.82 5.28
7453 8936 2.401766 GCCTGGTCCATGAGCGTTG 61.402 63.158 0.00 0.00 32.15 4.10
7456 8939 2.513204 CTGCCTGGTCCATGAGCG 60.513 66.667 0.00 0.00 32.15 5.03
7467 8950 3.418684 AAACAGTAACCTACCTGCCTG 57.581 47.619 0.00 0.00 0.00 4.85
7481 8964 1.865865 ATCAGACGACGCAAAACAGT 58.134 45.000 0.00 0.00 0.00 3.55
7483 8966 3.181505 ACAAAATCAGACGACGCAAAACA 60.182 39.130 0.00 0.00 0.00 2.83
7492 8975 6.147581 GTCACTAGTACACAAAATCAGACGA 58.852 40.000 0.00 0.00 0.00 4.20
7493 8976 5.918576 TGTCACTAGTACACAAAATCAGACG 59.081 40.000 0.00 0.00 0.00 4.18
7511 8994 3.834813 TCATCTACTTGCTCCTTGTCACT 59.165 43.478 0.00 0.00 0.00 3.41
7517 9000 3.054875 TGTGCATCATCTACTTGCTCCTT 60.055 43.478 0.00 0.00 37.28 3.36
7540 9023 4.080638 TGGCCAAAACAAACTTCAGGAAAT 60.081 37.500 0.61 0.00 0.00 2.17
7569 9053 0.317479 ACAGTACCAGCAAGTCCGAC 59.683 55.000 0.00 0.00 0.00 4.79
7571 9055 1.798813 GAAACAGTACCAGCAAGTCCG 59.201 52.381 0.00 0.00 0.00 4.79
7579 9063 4.627467 CCAGAGAAATCGAAACAGTACCAG 59.373 45.833 0.00 0.00 0.00 4.00
7584 9068 5.611374 TCTTTCCAGAGAAATCGAAACAGT 58.389 37.500 0.00 0.00 41.12 3.55
7585 9069 6.183360 GGATCTTTCCAGAGAAATCGAAACAG 60.183 42.308 0.00 0.00 41.12 3.16
7605 9089 4.424842 GGGAGATGATTACAGGAGGATCT 58.575 47.826 0.00 0.00 33.73 2.75
7652 9137 7.718334 TCTCTGTTTTGGTCTACATGAGATA 57.282 36.000 0.00 0.00 36.29 1.98
7663 9148 6.701841 TGCTCGATATAATCTCTGTTTTGGTC 59.298 38.462 0.00 0.00 0.00 4.02
7683 9168 2.810274 CCTGTTGGGAATCATATGCTCG 59.190 50.000 0.00 0.00 37.23 5.03
7717 9202 1.912371 GAACCCAGCAGCGTTAGTGC 61.912 60.000 0.00 0.00 41.54 4.40
7772 9257 7.346471 TGGAAAGGAATATGGTCTTAGAAAGG 58.654 38.462 0.00 0.00 0.00 3.11
7773 9258 8.986929 ATGGAAAGGAATATGGTCTTAGAAAG 57.013 34.615 0.00 0.00 0.00 2.62
7778 9263 8.337118 AGAAGATGGAAAGGAATATGGTCTTA 57.663 34.615 0.00 0.00 0.00 2.10
7891 9379 5.068636 GTGATGGCTCCATATGTCTCAAAT 58.931 41.667 0.65 0.00 36.70 2.32
7968 9458 7.630082 TGAACATAAACTCTTTAGGCCTGTAT 58.370 34.615 17.99 0.00 30.52 2.29
8016 9507 3.312973 GGTTGTACACGTGATGAAAACCA 59.687 43.478 25.01 3.56 37.93 3.67
8039 9530 4.338400 AGTGCTTTTGTTAGAACCACTTCC 59.662 41.667 0.00 0.00 0.00 3.46
8040 9531 5.500645 AGTGCTTTTGTTAGAACCACTTC 57.499 39.130 0.00 0.00 0.00 3.01
8042 9533 4.947388 TCAAGTGCTTTTGTTAGAACCACT 59.053 37.500 0.00 0.00 33.89 4.00
8043 9534 5.065988 TCTCAAGTGCTTTTGTTAGAACCAC 59.934 40.000 1.64 0.00 0.00 4.16
8086 9633 3.084039 TGCTTCTGCTCCAAAGTTATGG 58.916 45.455 0.00 0.00 40.48 2.74
8089 9636 3.668447 CTCTGCTTCTGCTCCAAAGTTA 58.332 45.455 0.00 0.00 40.48 2.24
8096 9643 0.036577 TCTTGCTCTGCTTCTGCTCC 60.037 55.000 0.00 0.00 40.48 4.70
8138 9685 7.145985 GTCCTTTCCTTTTTGTATTCCTGAAC 58.854 38.462 0.00 0.00 0.00 3.18
8147 9694 4.799715 TCAGGGTCCTTTCCTTTTTGTA 57.200 40.909 0.00 0.00 31.06 2.41
8165 9712 2.923655 CCACACGTGTAGCACTTATCAG 59.076 50.000 22.90 3.99 31.34 2.90
8180 9727 1.130373 GCCATGTGTTCATACCACACG 59.870 52.381 0.00 0.00 46.47 4.49
8187 9734 2.027653 TCGGAGTTGCCATGTGTTCATA 60.028 45.455 0.00 0.00 35.94 2.15
8193 9740 1.167851 ACATTCGGAGTTGCCATGTG 58.832 50.000 0.00 0.00 33.37 3.21
8195 9742 3.302365 AAAACATTCGGAGTTGCCATG 57.698 42.857 0.00 0.00 35.94 3.66
8211 9758 6.019881 GTGTCACTAAACTTGCCATCAAAAAC 60.020 38.462 0.00 0.00 0.00 2.43
8217 9764 3.064207 TCGTGTCACTAAACTTGCCATC 58.936 45.455 0.65 0.00 0.00 3.51
8234 9781 2.699954 ACTAAAGTTGCCATCCTCGTG 58.300 47.619 0.00 0.00 0.00 4.35
8235 9782 3.418684 AACTAAAGTTGCCATCCTCGT 57.581 42.857 0.00 0.00 36.80 4.18
8257 9804 4.202141 CCCAAAAGAAGTTGTCATGCTTGA 60.202 41.667 0.00 0.00 0.00 3.02
8328 9876 9.563898 AACGCTTTTTACTATACTAAAATTGCC 57.436 29.630 12.14 0.00 30.16 4.52
8341 9889 5.757808 ACTCCGGTTTTAACGCTTTTTACTA 59.242 36.000 0.00 0.00 0.00 1.82
8342 9890 4.576053 ACTCCGGTTTTAACGCTTTTTACT 59.424 37.500 0.00 0.00 0.00 2.24
8354 9902 1.810151 GCATGAAGCACTCCGGTTTTA 59.190 47.619 0.00 0.00 44.79 1.52
8357 9905 3.987404 GCATGAAGCACTCCGGTT 58.013 55.556 0.00 0.00 44.79 4.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.